1|Sequence|1|10|MAGSPLLWGP
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 MAGSPLLWG 9
M GSP+LW
Sbjct: 1982 MEGSPMLWA 1990
>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)
Query: 3 GSPLLWG 9
G P++WG
Sbjct: 46 GGPVVWG 52
>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GSPLLWG 9
G P++WG
Sbjct: 46 GGPVVWG 52
>sp|NCAP_NIPAV|NUCLEOPROTEIN virus
Query: 2 AGSPLLW 8
G PLLW
Sbjct: 325 GGYPLLW 331
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 AGSPLLW 8
G PLLW
Sbjct: 325 GGYPLLW 331
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 GSPLLW 8
G P+LW
Sbjct: 1920 GKPILW 1925
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 GSPLLW 8
G P+LW
Sbjct: 1920 GKPILW 1925
>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2
Query: 2 AGSPLLWGP 10
AG+ L W P
Sbjct: 364 AGADLRWAP 372
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 2 AGSPLLWGP 10
AG+ L W P
Sbjct: 364 AGADLRWAP 372
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 1 MAGSPLLWG 9
+ +PL WG
Sbjct: 349 LTSTPLRWG 357
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 2 AGSPLLW 8
+GSPLL+
Sbjct: 654 SGSPLLF 660
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GSPLLWG 9
G+P LWG
Sbjct: 358 GTPSLWG 364
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GSPLLWG 9
G+P LWG
Sbjct: 358 GTPSLWG 364
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GSPLLWG 9
G+P LWG
Sbjct: 358 GTPSLWG 364
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 MAGSPLLWGP 10
+AG+ ++GP
Sbjct: 962 IAGTKFIFGP 971
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 AGSPLLWGP 10
AG+P+L P
Sbjct: 63 AGAPVLKSP 71
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 1 MAGSPLLW 8
+AG+P +W
Sbjct: 347 LAGTPAVW 354
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 1 MAGSPLLW 8
+AG+P +W
Sbjct: 345 LAGTPAVW 352
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 GSPLLW 8
G P++W
Sbjct: 1981 GKPVIW 1986
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 GSPLLW 8
G P++W
Sbjct: 2017 GKPVIW 2022
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 GSPLLW 8
G P++W
Sbjct: 2037 GKPVIW 2042
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 GSPLLW 8
G P++W
Sbjct: 2067 GKPVIW 2072
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 GSPLLW 8
G P++W
Sbjct: 1981 GKPVIW 1986
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 GSPLLW 8
G P++W
Sbjct: 2017 GKPVIW 2022
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 GSPLLW 8
G P++W
Sbjct: 2037 GKPVIW 2042
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 GSPLLW 8
G P++W
Sbjct: 2067 GKPVIW 2072
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 5 PLLWGP 10
P++W P
Sbjct: 2582 PIMWSP 2587
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 1 MAGSPLLWG 9
+ +PL WG
Sbjct: 348 LTSTPLRWG 356
2|Sequence|6|15|LLWGPRAGGV
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 GPRAGGV 10
GPR GGV
Sbjct: 858 GPRFGGV 864
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 4 GPRAGGV 10
GPR GG+
Sbjct: 859 GPRYGGI 865
>sp|SHDAG_HDVP1|SMALL delta antigen|Hepatitis delta virus genotype III
Query: 4 GPRAGGV 10
GPR GGV
Sbjct: 145 GPRPGGV 151
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 3 WGPRAG 8
+GPRAG
Sbjct: 15 YGPRAG 20
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 WGPRAG 8
+GPRAG
Sbjct: 15 YGPRAG 20
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 WGPRAG 8
+GPRAG
Sbjct: 15 YGPRAG 20
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 WGPRAG 8
+GPRAG
Sbjct: 15 YGPRAG 20
>sp|SHDAG_HDVV2|SMALL delta antigen|Hepatitis delta virus genotype III
Query: 4 GPRAGGV 10
GPR GGV
Sbjct: 145 GPRPGGV 151
>sp|SHDAG_HDVV3|SMALL delta antigen|Hepatitis delta virus genotype III
Query: 4 GPRAGGV 10
GPR GGV
Sbjct: 145 GPRPGGV 151
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 LWGPRAGGV 10
LW PR G V
Sbjct: 1220 LWSPREGFV 1228
>sp|SHDAG_HDVV1|SMALL delta antigen|Hepatitis delta virus genotype III
Query: 4 GPRAGGV 10
GPR GGV
Sbjct: 145 GPRPGGV 151
>sp|E1BS_ADE05|E1B protein, small T-antigen|Human adenovirus C serotype 5
Query: 3 WGPRAG 8
W PRAG
Sbjct: 166 WNPRAG 171
>sp|E1BS_ADE02|E1B protein, small T-antigen|Human adenovirus C serotype 2
Query: 3 WGPRAG 8
W PRAG
Sbjct: 165 WNPRAG 170
>sp|LHDAG_HDVP1|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 GPRAGGV 10
GPR GGV
Sbjct: 145 GPRPGGV 151
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 WGPRA 7
WGP+A
Sbjct: 983 WGPQA 987
Query: 3 WGPRAGG 9
W P GG
Sbjct: 1141 WSPMEGG 1147
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 3 WGPRA 7
WGP+A
Sbjct: 982 WGPQA 986
Query: 3 WGPRAGG 9
W P GG
Sbjct: 1140 WSPMEGG 1146
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 3 WGPRA 7
WGP+A
Sbjct: 1003 WGPQA 1007
Query: 3 WGPRAGG 9
W P GG
Sbjct: 1161 WSPMEGG 1167
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 WGPRA 7
WGP+A
Sbjct: 984 WGPQA 988
Query: 3 WGPRAGG 9
W P GG
Sbjct: 1142 WSPMEGG 1148
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 LLWGPRAG 8
+ W PR G
Sbjct: 439 IYWSPRPG 446
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 LLWGPRAG 8
+ W PR G
Sbjct: 439 IYWSPRPG 446
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 LLWGPRAG 8
+ W PR G
Sbjct: 439 IYWSPRPG 446
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LLWGPRAG 8
+ W PR G
Sbjct: 439 IYWSPRPG 446
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LLWGPRAG 8
+ W PR G
Sbjct: 439 IYWSPRPG 446
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LLWGPRAG 8
+ W PR G
Sbjct: 439 IYWSPRPG 446
>sp|LHDAG_HDVV2|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 GPRAGGV 10
GPR GGV
Sbjct: 145 GPRPGGV 151
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 LLWGPRAGG 9
L+ PRAGG
Sbjct: 3 LVPSPRAGG 11
>sp|LHDAG_HDVV3|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 GPRAGGV 10
GPR GGV
Sbjct: 145 GPRPGGV 151
>sp|DUT_HHV8P|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 8 type P
Query: 3 WGPRA 7
WGPR
Sbjct: 193 WGPRG 197
>sp|LHDAG_HDVV1|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 GPRAGGV 10
GPR GGV
Sbjct: 145 GPRPGGV 151
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LWGPRAGG 9
L PRAGG
Sbjct: 493 LTAPRAGG 500
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LWGPRAGG 9
L+G R GG
Sbjct: 1228 LYGKRGGG 1235
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LWGPRAGG 9
L+G R GG
Sbjct: 1228 LYGKRGGG 1235
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LWGPRAGG 9
L+G R GG
Sbjct: 1228 LYGKRGGG 1235
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LWGPRAGG 9
L+G R GG
Sbjct: 1228 LYGKRGGG 1235
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LWGPRAGG 9
L+G R GG
Sbjct: 1228 LYGKRGGG 1235
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LWGPRAGG 9
L+G R GG
Sbjct: 1228 LYGKRGGG 1235
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LWGPRAGG 9
L+G R GG
Sbjct: 1228 LYGKRGGG 1235
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LWGPRAGG 9
L+G R GG
Sbjct: 1228 LYGKRGGG 1235
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 2 LWGP 5
LWGP
Sbjct: 276 LWGP 279
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 2 LWGP 5
LWGP
Sbjct: 276 LWGP 279
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 2 LWGP 5
LWGP
Sbjct: 272 LWGP 275
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 LLWGP 5
L+WGP
Sbjct: 65 LVWGP 69
>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LLWGPRAG 8
+LWG +AG
Sbjct: 188 MLWGAKAG 195
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 3 WGPRAG 8
WG RAG
Sbjct: 86 WGFRAG 91
>sp|SHDAG_HDVU2|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 4 GPRAGGV 10
GPR GGV
Sbjct: 146 GPRVGGV 152
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 LLWGPRAGG 9
L W P GG
Sbjct: 1147 LSWAPLLGG 1155
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 LLWGPRAGG 9
L W P GG
Sbjct: 1147 LSWAPLLGG 1155
>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain
Query: 3 WGPRA 7
WGPRA
Sbjct: 4 WGPRA 8
>sp|LHDAG_HDVU2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 4 GPRAGGV 10
GPR GGV
Sbjct: 146 GPRVGGV 152
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 4 GPRAGGV 10
GP GGV
Sbjct: 71 GPSGGGV 77
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LLWGPRAGGV 10
L GPR GG+
Sbjct: 53 LTIGPRFGGL 62
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 3 WGPRAG 8
WG RAG
Sbjct: 86 WGFRAG 91
>sp|M2_I02A4|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 4 GPRAGGV 10
GP GGV
Sbjct: 62 GPSTGGV 68
>sp|M2_I02A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 GPRAGGV 10
GP GGV
Sbjct: 62 GPSTGGV 68
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 LLWGPRAGG 9
L +GP GG
Sbjct: 847 LFFGPLEGG 855
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 LLWGPRAGG 9
L +GP GG
Sbjct: 847 LFFGPLEGG 855
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 LLWGPRAGG 9
L +GP GG
Sbjct: 846 LFFGPLEGG 854
>sp|HEX8_ADE03|HEXON-ASSOCIATED protein|Human adenovirus B serotype 3
Query: 5 PRAGGV 10
PR+GG+
Sbjct: 86 PRSGGI 91
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 LLWGPRAGG 9
LL PR GG
Sbjct: 253 LLQAPRLGG 261
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 1 LLWGPRAGG 9
LLW + GG
Sbjct: 165 LLWLTKKGG 173
>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 3 WGPRAGGV 10
W P+A GV
Sbjct: 77 WSPQAQGV 84
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 3 WGPRAGGV 10
W P+A GV
Sbjct: 77 WSPQAQGV 84
>sp|HBSAG_HBVF3|LARGE envelope protein|Hepatitis B virus genotype F1
Query: 3 WGPRAGGV 10
W P+A GV
Sbjct: 77 WSPQAQGV 84
>sp|M2_I02A1|MATRIX protein 2|Influenza A virus (strain A/Guinea
Query: 4 GPRAGGV 10
GP GGV
Sbjct: 55 GPSTGGV 61
>sp|E1B9_ADE07|EARLY E1B 9 kDa protein|Human adenovirus B serotype 7
Query: 4 GPRAGGV 10
GP GGV
Sbjct: 71 GPSGGGV 77
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 3 WGPRAGGV 10
W P+A GV
Sbjct: 77 WSPQAQGV 84
>sp|M2_I56A3|MATRIX protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 4 GPRAGGV 10
GP GG+
Sbjct: 62 GPSTGGI 68
>sp|HBSAG_HBVC3|LARGE envelope protein|Hepatitis B virus genotype C
Query: 3 WGPRAGGV 10
W P+A GV
Sbjct: 77 WSPQAQGV 84
>sp|BALF1_EBVG|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LWGPRAGGV 10
LW R GG+
Sbjct: 188 LWFARLGGM 196
>sp|BALF1_EBVB9|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LWGPRAGGV 10
LW R GG+
Sbjct: 188 LWFARLGGM 196
>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D
Query: 3 WGPRAGGV 10
W P+A G+
Sbjct: 66 WSPQAQGI 73
>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D
Query: 3 WGPRAGGV 10
W P+A G+
Sbjct: 66 WSPQAQGI 73
>sp|CAP8_ADE02|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 2
Query: 5 PRAGGV 10
PR+GG+
Sbjct: 178 PRSGGI 183
>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 3 WGPRAGGV 10
W P+A G+
Sbjct: 77 WSPQAQGI 84
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 WGPRAGGV 10
W +AGG+
Sbjct: 663 WNGQAGGL 670
>sp|CAP8_ADE05|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 5
Query: 5 PRAGGV 10
PR+GG+
Sbjct: 178 PRSGGI 183
>sp|HBSAG_HBVC4|LARGE envelope protein|Hepatitis B virus genotype C
Query: 3 WGPRAGGV 10
W P+A G+
Sbjct: 77 WSPQAQGI 84
3|Sequence|11|20|RAGGVGLLVL
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 GGVGLLV 9
GGVGL+V
Sbjct: 1224 GGVGLIV 1230
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 GGVGLLV 9
GGVGL+V
Sbjct: 1223 GGVGLVV 1229
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 GGVGLLV 9
GGVGL+V
Sbjct: 1223 GGVGLVV 1229
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 GGVGLLV 9
GGVGL+V
Sbjct: 1223 GGVGLVV 1229
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 GGVGLLV 9
GGVGL+V
Sbjct: 1224 GGVGLVV 1230
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 GGVGLLV 9
GGVGL+V
Sbjct: 1224 GGVGLVV 1230
>sp|CAP8_ADE40|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 40
Query: 1 RAGGVGLL 8
R+GG+G L
Sbjct: 185 RSGGIGTL 192
>sp|CAP8_ADE12|PRE-HEXON-LINKING protein VIII|Human adenovirus A serotype 12
Query: 1 RAGGVGLL 8
R+GG+G L
Sbjct: 185 RSGGIGTL 192
>sp|CAP8_ADE05|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 5
Query: 1 RAGGVGLL 8
R+GG+G L
Sbjct: 179 RSGGIGTL 186
>sp|CAP8_ADE02|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 2
Query: 1 RAGGVGLL 8
R+GG+G L
Sbjct: 179 RSGGIGTL 186
>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41
Query: 1 RAGGVGLL 8
R+GG+G L
Sbjct: 185 RSGGIGTL 192
>sp|HEX8_ADE03|HEXON-ASSOCIATED protein|Human adenovirus B serotype 3
Query: 1 RAGGVGLL 8
R+GG+G L
Sbjct: 87 RSGGIGTL 94
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 2 AGGVGLLV 9
AGG+GL +
Sbjct: 245 AGGIGLSI 252
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 2 AGGVGLLV 9
AGG+GL +
Sbjct: 245 AGGIGLSI 252
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 AGGVGLLV 9
AGG+GL +
Sbjct: 245 AGGIGLSI 252
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 AGGVGLLV 9
AGG+GL +
Sbjct: 245 AGGIGLSI 252
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 2 AGGVGLLV 9
AGG+GL +
Sbjct: 245 AGGIGLSI 252
>sp|VP12_CTFVL|UNCHARACTERIZED protein VP12|Colorado tick fever virus (strain
Query: 2 AGGVGL 7
AGG+GL
Sbjct: 179 AGGIGL 184
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 RAGGVGLLVL 10
+AG VG+L L
Sbjct: 4576 KAGLVGVLTL 4585
4|Sequence|16|25|GLLVLLLLGL
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 LLVLLLLGL 10
LLV+ LLG+
Sbjct: 105 LLVITLLGM 113
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 LLVLLLLGL 10
LLV+ LLG+
Sbjct: 105 LLVITLLGM 113
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 LLVLLLLGL 10
LLV+ LLG+
Sbjct: 105 LLVIALLGM 113
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 LLVLLLLGL 10
LLV+ LLG+
Sbjct: 105 LLVIALLGM 113
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 VLLLLGL 10
VLL+LGL
Sbjct: 54 VLLILGL 60
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 VLLLLGL 10
VLL+LGL
Sbjct: 54 VLLILGL 60
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 GLLVLLLL 8
G+L+LLL+
Sbjct: 268 GVLILLLI 275
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 GLLVLLLLGL 10
G VLLLLG
Sbjct: 827 GAGVLLLLGF 836
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 LVLLLLGL 10
+VLLL+G+
Sbjct: 1317 IVLLLIGI 1324
5|Sequence|21|30|LLLGLFRPPP
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LLLGLFR 7
LL+GLFR
Sbjct: 6737 LLIGLFR 6743
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LLLGLFR 7
LL+GLFR
Sbjct: 6757 LLIGLFR 6763
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LLLGLFR 7
LL+GLFR
Sbjct: 6787 LLIGLFR 6793
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 3 LGLFRPP 9
LG+ RPP
Sbjct: 6 LGVMRPP 12
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 LLLGLFRPP 9
L+LG+ +PP
Sbjct: 148 LVLGVHKPP 156
Query: 2 LLGLFRPPP 10
L G+F PP
Sbjct: 306 LFGVFWTPP 314
>sp|GP42_EBVG|GLYCOPROTEIN 42|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LLLGLFRPP 9
LLL F PP
Sbjct: 21 LLLAYFLPP 29
>sp|GP42_EBVB9|GLYCOPROTEIN 42|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LLLGLFRPP 9
LLL F PP
Sbjct: 21 LLLAYFLPP 29
>sp|GP42_EBVA8|GLYCOPROTEIN 42|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LLLGLFRPP 9
LLL F PP
Sbjct: 21 LLLAYFLPP 29
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LLLGLFR 7
LL+GL+R
Sbjct: 6700 LLIGLYR 6706
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 1 LLLGLFR 7
L+LGL+R
Sbjct: 138 LILGLYR 144
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 LGLFRPP 9
LGL +PP
Sbjct: 1838 LGLTQPP 1844
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LGLFRPPP 10
+GLF P P
Sbjct: 409 VGLFMPNP 416
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LGLFRPPP 10
+GLF P P
Sbjct: 409 VGLFMPNP 416
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 LGLFRPPP 10
+GLF P P
Sbjct: 409 VGLFMPNP 416
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 LLGLFRPPP 10
L G+F PP
Sbjct: 374 LFGIFWNPP 382
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 2 LLGLFRPPP 10
LLG+ PP
Sbjct: 74 LLGIITGPP 82
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 2 LLGLFRPPP 10
LLG+ PP
Sbjct: 74 LLGIITGPP 82
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LLLGLFRPP 9
L+LGL PP
Sbjct: 56 LILGLLTPP 64
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 5 LFRPP 9
+FRPP
Sbjct: 511 IFRPP 515
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 1 LLLGLFRPP 9
LLLG F P
Sbjct: 54 LLLGFFETP 62
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LLLGLFRPP 9
L+LGL PP
Sbjct: 56 LILGLLTPP 64
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 1 LLLGLFRPP 9
LLLG F P
Sbjct: 54 LLLGFFETP 62
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 3 LGLFRP 8
LG+FRP
Sbjct: 794 LGIFRP 799
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 LLGLFRPP 9
L G+F PP
Sbjct: 398 LTGIFSPP 405
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 797 LGLYRP 802
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 790 LGLYRP 795
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 797 LGLYRP 802
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 797 LGLYRP 802
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 797 LGLYRP 802
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 790 LGLYRP 795
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 4 GLFRPPP 10
GL+R PP
Sbjct: 719 GLYRYPP 725
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 3 LGLFRP 8
LGL+RP
Sbjct: 795 LGLYRP 800
6|Sequence|26|35|FRPPPALCAR
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 3 PPPALCAR 10
P PA+C R
Sbjct: 76 PKPAICQR 83
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 3 PPPALCAR 10
P PA+C R
Sbjct: 77 PKPAICQR 84
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 3 PPPALCAR 10
P PA+C R
Sbjct: 77 PKPAICQR 84
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 3 PPPALCAR 10
P PA+C R
Sbjct: 79 PKPAICQR 86
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 3 PPPALCAR 10
P PA+C R
Sbjct: 78 PKPAICQR 85
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FRPPP 5
FRPPP
Sbjct: 138 FRPPP 142
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 RPPPALC 8
+PP A+C
Sbjct: 489 KPPSAIC 495
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 3 PPPALCAR 10
P PA+C +
Sbjct: 77 PKPAICQK 84
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 FRPPPALCAR 10
F+P A+C R
Sbjct: 1133 FKPIMAMCFR 1142
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 4 PPALCA 9
PP LCA
Sbjct: 820 PPRLCA 825
Query: 3 PPPAL 7
PPPA+
Sbjct: 1455 PPPAI 1459
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 RPPPALC 8
RPP LC
Sbjct: 818 RPPRRLC 824
Query: 3 PPPAL 7
PPPA+
Sbjct: 1445 PPPAI 1449
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 3 PPPALC 8
P PA+C
Sbjct: 77 PKPAIC 82
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 FRPPPALCAR 10
F+P A+C R
Sbjct: 1142 FKPIMAICFR 1151
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 FRPPPALCAR 10
F+P A+C R
Sbjct: 1134 FKPIMAICFR 1143
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 3 PPPALC 8
P PA+C
Sbjct: 77 PKPAIC 82
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 4 PPALCAR 10
PP LC +
Sbjct: 159 PPLLCEK 165
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RPPPALCAR 10
+P P+LC R
Sbjct: 236 KPLPSLCVR 244
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 PPPAL 7
PPPA+
Sbjct: 1421 PPPAI 1425
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 4 PPALC 8
PP LC
Sbjct: 1102 PPGLC 1106
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 PPPAL 7
PPPA+
Sbjct: 1425 PPPAI 1429
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 PPALC 8
PP LC
Sbjct: 221 PPGLC 225
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 PPPAL 7
PPPA+
Sbjct: 1446 PPPAI 1450
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 PPPAL 7
PPPA+
Sbjct: 1418 PPPAI 1422
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 PPPAL 7
PPPA+
Sbjct: 1457 PPPAI 1461
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 PPPAL 7
PPPA+
Sbjct: 1456 PPPAI 1460
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 PPPAL 7
PPPA+
Sbjct: 1465 PPPAI 1469
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PPPAL 7
PPPA+
Sbjct: 1449 PPPAI 1453
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 PPPAL 7
PPPA+
Sbjct: 1432 PPPAI 1436
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 PPPAL 7
PPPA+
Sbjct: 1455 PPPAI 1459
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 PPPAL 7
PPPA+
Sbjct: 1446 PPPAI 1450
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PPPAL 7
PPPA+
Sbjct: 1447 PPPAI 1451
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 PPPAL 7
PPPA+
Sbjct: 1444 PPPAI 1448
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 PPPAL 7
PPPA+
Sbjct: 1458 PPPAI 1462
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 PPPAL 7
PPPA+
Sbjct: 1447 PPPAI 1451
>sp|ORF3_HEVCT|PROTEIN ORF3|Hepatitis E virus genotype 4
Query: 1 FRPPPAL 7
F+PPP L
Sbjct: 69 FQPPPGL 75
>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49
Query: 1 FRPPPALC 8
+ PPA C
Sbjct: 102 YNAPPAQC 109
>sp|P12I_HTL1A|ACCESSORY protein p12I|Human T-cell leukemia virus 1
Query: 2 RPPPALC 8
RPPPA C
Sbjct: 33 RPPPAPC 39
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 RPPPALCAR 10
P P+LC R
Sbjct: 236 EPLPSLCVR 244
7|Sequence|31|40|ALCARPVKEP
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 CARPVKEP 10
C R ++EP
Sbjct: 1292 CVRKIEEP 1299
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 CARPVKE 9
C RP++E
Sbjct: 1302 CLRPIEE 1308
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 CARPVKE 9
C RP++E
Sbjct: 1302 CLRPIEE 1308
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 CARPVKE 9
C RP++E
Sbjct: 1302 CLRPIEE 1308
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 CARPVKE 9
C RP++E
Sbjct: 1302 CLRPIEE 1308
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 CARPVKE 9
C RP++E
Sbjct: 1302 CLRPIEE 1308
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 CARPVKEP 10
C R VK+P
Sbjct: 314 CPRYVKQP 321
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 ALCARPV 7
ALC PV
Sbjct: 448 ALCGSPV 454
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 3 CARPVKE 9
C RP+++
Sbjct: 1320 CVRPIED 1326
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 CARPVKE 9
CA+ +KE
Sbjct: 667 CAKEIKE 673
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 CARPVKE 9
CA+ +KE
Sbjct: 667 CAKEIKE 673
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 ALCARPVKEP 10
A C RPV P
Sbjct: 1441 AACPRPVGGP 1450
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 ALCARPVKEP 10
A C RPV P
Sbjct: 1441 AACPRPVGGP 1450
8|Sequence|36|45|PVKEPRGLSA
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 1 PVKEPRG 7
P K PRG
Sbjct: 243 PCKRPRG 249
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 1 PVKEPRG 7
P K PRG
Sbjct: 243 PCKRPRG 249
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 VKEPRGLSA 10
V+EP GL A
Sbjct: 365 VREPSGLVA 373
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VKEPRG 7
V+EPRG
Sbjct: 228 VREPRG 233
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VKEPRG 7
V+EPRG
Sbjct: 228 VREPRG 233
9|Sequence|41|50|RGLSAASPPL
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 RGLSAASPP 9
+GL AA PP
Sbjct: 1902 KGLPAAIPP 1910
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 RGLSAASPP 9
+GL AA PP
Sbjct: 1903 KGLPAAIPP 1911
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 RGLSAASPP 9
+GL AA PP
Sbjct: 1902 KGLPAAIPP 1910
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 RGLSAASPP 9
+GL AA PP
Sbjct: 1902 KGLPAAIPP 1910
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 RGLSAASPP 9
+GL AA PP
Sbjct: 1903 KGLPAAIPP 1911
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 RGLSAASPP 9
+GL AA PP
Sbjct: 1903 KGLPAAIPP 1911
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RGLSAASPPL 10
+GL+ +PPL
Sbjct: 450 QGLTPTAPPL 459
>sp|US32_HCMVM|PROTEIN US32|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RGLSAASPP 9
RGL PP
Sbjct: 123 RGLRGTPPP 131
>sp|US32_HCMVA|UNCHARACTERIZED protein HHRF7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RGLSAASPP 9
RGL PP
Sbjct: 123 RGLRGTPPP 131
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 1 RGLSAASPPL 10
RG+ A PPL
Sbjct: 208 RGVRQAPPPL 217
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 1 RGLSAASPPL 10
RG+ A PPL
Sbjct: 209 RGVRQAPPPL 218
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RGLSAASPPL 10
+GL+ +PPL
Sbjct: 452 QGLTPTAPPL 461
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 RGLSAASPPL 10
RG AA+P L
Sbjct: 357 RGFLAANPQL 366
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 RGLSAASPP 9
+GLS+ PP
Sbjct: 288 QGLSSTMPP 296
10|Sequence|46|55|ASPPLAETGA
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ASPPLAETGA 10
A+PPLA+T A
Sbjct: 1189 ATPPLADTAA 1198
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 ASPPLAETGA 10
A+PPLA+T A
Sbjct: 1162 ATPPLADTAA 1171
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 ASPPLAETGA 10
A+PPLA+T A
Sbjct: 1167 ATPPLADTAA 1176
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 PLAETGA 10
PL+ETGA
Sbjct: 473 PLSETGA 479
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 PLAETGA 10
PL+ETGA
Sbjct: 469 PLSETGA 475
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 2 SPPLAETGA 10
SPPL TG+
Sbjct: 214 SPPLDTTGS 222
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 ASPPLAETG 9
A PP+AE G
Sbjct: 491 AGPPVAEAG 499
>sp|DYR_HHV8P|PUTATIVE Dihydrofolate reductase|Human herpesvirus 8 type P
Query: 1 ASPPLAET 8
A+PP +ET
Sbjct: 202 ATPPFSET 209
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ASPPLAETG 9
A PPL TG
Sbjct: 515 ACPPLVTTG 523
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 PLAETG 9
PL+ETG
Sbjct: 466 PLSETG 471
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 PLAETGA 10
PL++TGA
Sbjct: 472 PLSKTGA 478
11|Sequence|51|60|AETGAPRRFR
>sp|Y10K_HBVD3|PUTATIVE uncharacterized 10.4 kDa protein|Hepatitis B virus genotype D
Query: 1 AETGAPRRFR 10
A+TG+PR+ R
Sbjct: 18 AQTGSPRKER 27
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 5 APRRFR 10
+PRRFR
Sbjct: 753 SPRRFR 758
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 5 APRRFR 10
+PRRFR
Sbjct: 753 SPRRFR 758
>sp|PG138_VARV|25 kDa core protein OPG138|Variola virus
Query: 4 GAPRR 8
GAPRR
Sbjct: 90 GAPRR 94
>sp|PG138_VAR67|25 kDa core protein OPG138|Variola virus (isolate
Query: 4 GAPRR 8
GAPRR
Sbjct: 90 GAPRR 94
>sp|PG138_MONPV|25 kDa core protein OPG138|Monkeypox virus (MPXV)
Query: 4 GAPRR 8
GAPRR
Sbjct: 91 GAPRR 95
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 ETGAPRRF 9
+TGA RF
Sbjct: 650 QTGATNRF 657
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AETGAPR 7
+ETG PR
Sbjct: 855 SETGPPR 861
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ETGAPR 7
ETGAP+
Sbjct: 60 ETGAPQ 65
12|Sequence|56|65|PRRFRRSVPR
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 RRFRRSVPR 10
R+FRRS+ R
Sbjct: 1055 RQFRRSLSR 1063
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 PRRFRRSV 8
PRR RRS+
Sbjct: 320 PRRQRRSI 327
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 RRFRRSVPR 10
R+FRRS+ R
Sbjct: 1056 RQFRRSLSR 1064
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 PRRFRRSVPR 10
PR R+ +PR
Sbjct: 58 PRSRRQPIPR 67
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 RRFRRSVPR 10
R+FRRS+ R
Sbjct: 1056 RQFRRSLSR 1064
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 RRFRRSVPR 10
R+FRRS+ R
Sbjct: 1055 RQFRRSLSR 1063
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 PRRFRRSV 8
PR +RR+V
Sbjct: 1158 PREYRRAV 1165
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 1 PRRFRR 6
PRR+RR
Sbjct: 240 PRRYRR 245
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 1 PRRFRRSV 8
PR +RR+V
Sbjct: 1130 PREYRRAV 1137
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 1 PRRFRR 6
PR+FRR
Sbjct: 38 PRKFRR 43
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 PRRFRR 6
PR+FRR
Sbjct: 38 PRKFRR 43
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 PRRFRRSV 8
PR F RS+
Sbjct: 519 PREFLRSI 526
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 PRRFRRSV 8
PR F RS+
Sbjct: 519 PREFLRSI 526
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 RRFRRSVPR 10
R+FR+S+ R
Sbjct: 1055 RQFRKSLSR 1063
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 RRFRRSVPR 10
R+FR+S+ R
Sbjct: 1055 RQFRKSLSR 1063
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 RRFRRSVPR 10
R+FR+S+ R
Sbjct: 1055 RQFRKSLSR 1063
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 RRFRRSVPR 10
R+FR+S+ R
Sbjct: 1055 RQFRKSLSR 1063
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PRRFRRSVPR 10
P+RF VPR
Sbjct: 387 PQRFACHVPR 396
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 RRFRRSVPR 10
R+FR+S+ R
Sbjct: 1055 RQFRKSLSR 1063
13|Sequence|61|70|RSVPRGEAAG
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 SVPRGEAAG 10
SVPRG + G
Sbjct: 602 SVPRGNSQG 610
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 SVPRGEAAG 10
SVPRG + G
Sbjct: 602 SVPRGNSQG 610
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 2 SVPRGEAA 9
S+PRGE
Sbjct: 8 SLPRGEGG 15
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 2 SVPRGEAA 9
S+PRGE
Sbjct: 8 SLPRGEGG 15
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 RSVPRGEA 8
RSVP G+A
Sbjct: 2169 RSVPVGKA 2176
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PRGEAAG 10
PRG A+G
Sbjct: 1224 PRGRASG 1230
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 2 SVPRGEAA 9
SVP G+A+
Sbjct: 377 SVPEGDAS 384
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 RSVPRGEA 8
RSVP G+A
Sbjct: 2169 RSVPVGKA 2176
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 RSVPRGEA 8
RSVP G+A
Sbjct: 2169 RSVPIGKA 2176
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 4 PRGEAAG 10
PRG AAG
Sbjct: 1205 PRGRAAG 1211
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 4 PRGEAAG 10
PRG AAG
Sbjct: 1205 PRGRAAG 1211
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 RSVPRGEA 8
RSVP G+A
Sbjct: 2169 RSVPIGKA 2176
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 2 SVPRGEAAG 10
S+PR A+G
Sbjct: 643 SIPRSRASG 651
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 SVPRGE 7
+VPRGE
Sbjct: 656 AVPRGE 661
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 SVPRGE 7
+VPRGE
Sbjct: 656 AVPRGE 661
14|Sequence|66|75|GEAAGAVQEL
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 EAAGAVQEL 10
E AGAV+EL
Sbjct: 1830 ERAGAVEEL 1838
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GEAAGAVQEL 10
G+AA A+Q +
Sbjct: 210 GDAAPAIQHI 219
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GEAAGAVQEL 10
G+AA A+Q +
Sbjct: 210 GDAAPAIQHI 219
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 GEAAGA 6
GEAAGA
Sbjct: 31 GEAAGA 36
15|Sequence|71|80|AVQELARALA
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 VQELARALA 10
VQELAR++A
Sbjct: 38 VQELARSMA 46
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AVQELARAL 9
A+Q++AR L
Sbjct: 173 AIQQMARNL 181
16|Sequence|76|85|ARALAHLLEA
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 1 ARALAHLL 8
ARALAHL+
Sbjct: 176 ARALAHLV 183
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 1 ARALAHLL 8
ARALAHL+
Sbjct: 167 ARALAHLV 174
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 ARALAHLLEA 10
ARALAH + A
Sbjct: 148 ARALAHGVRA 157
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 ARALAHLLEA 10
ARALAH + A
Sbjct: 148 ARALAHGVRA 157
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 ARALAHLLEA 10
ARALAH + A
Sbjct: 148 ARALAHGVRA 157
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 ARALAHLLEA 10
ARALAH + A
Sbjct: 148 ARALAHGVRA 157
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 ARALAHLLEA 10
ARALAH + A
Sbjct: 148 ARALAHGVRA 157
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ARALAH 6
ARALAH
Sbjct: 148 ARALAH 153
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 1 ARALAH 6
ARALAH
Sbjct: 32 ARALAH 37
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 1 ARALAH 6
ARALAH
Sbjct: 32 ARALAH 37
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 1 ARALAH 6
ARALAH
Sbjct: 20 ARALAH 25
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 1 ARALAH 6
ARALAH
Sbjct: 32 ARALAH 37
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 ALAHLLEA 10
L HLLEA
Sbjct: 223 GLGHLLEA 230
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 3 ALAHLLE 9
+AHLLE
Sbjct: 38 GIAHLLE 44
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 3 ALAHLLE 9
+AHLLE
Sbjct: 38 GIAHLLE 44
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 ALAHLLE 9
+AHLLE
Sbjct: 38 GIAHLLE 44
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 3 ALAHLLE 9
+AHLLE
Sbjct: 38 GIAHLLE 44
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 ALAHLLE 9
+AHLLE
Sbjct: 38 GIAHLLE 44
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 3 ALAHLLE 9
+AHLLE
Sbjct: 38 GIAHLLE 44
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 3 ALAHLLE 9
+AHLLE
Sbjct: 38 GIAHLLE 44
>sp|MATRX_ABLVB|MATRIX protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 RALAHLLEA 10
R L H+LE+
Sbjct: 80 RILRHILES 88
17|Sequence|81|90|HLLEAERQER
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 HLLEAERQER 10
HL E ER+ER
Sbjct: 1442 HLTEVEREER 1451
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 HLLEAERQER 10
HL E E++ER
Sbjct: 1444 HLTEVEKEER 1453
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 HLLEAERQER 10
HL E E++ER
Sbjct: 1444 HLTEVEKEER 1453
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 HLLEAERQER 10
HL E E++ER
Sbjct: 1442 HLTELEKEER 1451
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 HLLEAERQER 10
HL E E++ER
Sbjct: 1442 HLTELEKEER 1451
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 HLLEAERQER 10
HL E E++ER
Sbjct: 1442 HLTELEKEER 1451
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 HLLEAERQER 10
HL E E++ER
Sbjct: 1442 HLTELEKEER 1451
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 HLLEAERQER 10
HL E E++ER
Sbjct: 1442 HLTELEKEER 1451
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 HLLEAERQER 10
HL E E++ER
Sbjct: 1442 HLTELEKEER 1451
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 HLLEAERQER 10
HL E E++ER
Sbjct: 1442 HLTELEKEER 1451
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HLLEAERQER 10
HLLEAE + R
Sbjct: 226 HLLEAEEKAR 235
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 1 HLLEAERQE 9
H++ +RQE
Sbjct: 228 HIINPKRQE 236
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 1 HLLEAERQE 9
H++ +RQE
Sbjct: 228 HIINPKRQE 236
18|Sequence|86|95|ERQERARAEA
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ERQERARAEA 10
+RQERAR A
Sbjct: 76 QRQERARELA 85
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ERQERARAEA 10
+RQERAR A
Sbjct: 76 QRQERARELA 85
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ERQERARAEA 10
+RQERAR A
Sbjct: 76 QRQERARELA 85
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 ERQERARAE 9
E+ ERA+AE
Sbjct: 893 EQIERAKAE 901
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 RQERA 6
RQERA
Sbjct: 1554 RQERA 1558
19|Sequence|91|100|ARAEAQEAED
***** No hits found ******
20|Sequence|96|105|QEAEDQQARV
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 QEAEDQQARV 10
Q AED ARV
Sbjct: 763 QSAEDNAARV 772
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 QEAEDQQARV 10
Q AED ARV
Sbjct: 763 QSAEDNAARV 772
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 QEAEDQQARV 10
Q AED ARV
Sbjct: 763 QSAEDNAARV 772
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 QEAEDQQARV 10
Q AED ARV
Sbjct: 763 QSAEDNAARV 772
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QEAEDQQARV 10
QEA D+Q V
Sbjct: 92 QEATDEQRTV 101
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QEAEDQQARV 10
QEA D+Q V
Sbjct: 92 QEATDEQRTV 101
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QEAEDQQARV 10
QEA D+Q V
Sbjct: 92 QEATDEQRTV 101
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 AEDQQARV 10
AED ARV
Sbjct: 766 AEDNAARV 773
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 AEDQQARV 10
AED ARV
Sbjct: 766 AEDNAARV 773
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 EAEDQQAR 9
EAED+Q R
Sbjct: 750 EAEDRQMR 757
21|Sequence|101|110|QQARVLAQLL
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 QQARVLAQLL 10
QQAR + QL+
Sbjct: 35 QQARQMQQLI 44
>sp|VE7_HPV26|PROTEIN E7|Human papillomavirus type 26
Query: 1 QQARVLAQLL 10
Q RVL Q+L
Sbjct: 81 QNVRVLEQML 90
22|Sequence|106|115|LAQLLRVWGA
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 4 LLRVWG 9
L+R+WG
Sbjct: 364 LMRLWG 369
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 LRVWGA 10
LRVWG
Sbjct: 469 LRVWGG 474
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 LRVWGA 10
LRVWG
Sbjct: 461 LRVWGG 466
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 LRVWG 9
LRVWG
Sbjct: 462 LRVWG 466
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 LRVWG 9
LRVWG
Sbjct: 465 LRVWG 469
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 LRVWG 9
LRVWG
Sbjct: 464 LRVWG 468
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 3 QLLRVWG 9
Q+L +WG
Sbjct: 185 QMLVIWG 191
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 QLLRVWGA 10
QLL VW A
Sbjct: 5472 QLLLVWEA 5479
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 LLRVWGA 10
LLR WG
Sbjct: 593 LLRRWGG 599
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 LLRVWGA 10
LLR WG
Sbjct: 593 LLRRWGG 599
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 4 LLRVWGA 10
LLR WG
Sbjct: 593 LLRRWGG 599
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 586 QLLGIWG 592
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 3 QLLRVWG 9
Q+L +WG
Sbjct: 185 QMLIIWG 191
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 3 QLLRVWG 9
Q+L +WG
Sbjct: 185 QMLIIWG 191
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 3 QLLRVWG 9
Q+L +WG
Sbjct: 185 QMLIIWG 191
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 3 QLLRVWG 9
Q+L +WG
Sbjct: 185 QMLIIWG 191
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 594 QLLGIWG 600
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 583 QLLGIWG 589
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 578 QLLGIWG 584
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 577 QLLGIWG 583
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 585 QLLGIWG 591
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 585 QLLGIWG 591
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 567 QLLGIWG 573
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 579 QLLGIWG 585
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 577 QLLGIWG 583
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 591 QLLGIWG 597
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 582 QLLGIWG 588
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 584 QLLGIWG 590
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 580 QLLGIWG 586
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 598 QLLGIWG 604
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 587 QLLGIWG 593
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 600 QLLGIWG 606
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 591 QLLGIWG 597
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 LRVWG 9
LRVWG
Sbjct: 462 LRVWG 466
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 590 QLLGIWG 596
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 578 QLLGIWG 584
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 591 QLLGIWG 597
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 602 QLLGIWG 608
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 587 QLLGIWG 593
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 589 QLLGIWG 595
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 591 QLLGIWG 597
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 588 QLLGIWG 594
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 581 QLLGIWG 587
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 590 QLLGIWG 596
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 586 QLLGIWG 592
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 582 QLLGIWG 588
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 588 QLLGIWG 594
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 591 QLLGIWG 597
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 591 QLLGIWG 597
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 591 QLLGIWG 597
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 590 QLLGIWG 596
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 596 QLLGIWG 602
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 LRVWG 9
LRVWG
Sbjct: 151 LRVWG 155
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 LRVWG 9
LRVWG
Sbjct: 151 LRVWG 155
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 LRVWG 9
LRVWG
Sbjct: 151 LRVWG 155
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LAQLLRV 7
+AQLLR+
Sbjct: 334 MAQLLRI 340
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 AQLLRVW 8
AQL R+W
Sbjct: 63 AQLKRLW 69
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LAQLLRV 7
+AQLLR+
Sbjct: 334 MAQLLRI 340
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 1 LAQLLRV 7
+AQLLR+
Sbjct: 218 MAQLLRI 224
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LAQLLRV 7
+AQLLR+
Sbjct: 334 MAQLLRI 340
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 1 LAQLLRV 7
+AQLLR+
Sbjct: 206 MAQLLRI 212
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 LAQLLRV 7
+AQLLR+
Sbjct: 334 MAQLLRI 340
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 QLLRVW 8
QLL++W
Sbjct: 2628 QLLKMW 2633
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QLL +WG
Sbjct: 581 QLLGLWG 587
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QLLRVWG 9
QL+ +WG
Sbjct: 583 QLMGIWG 589
23|Sequence|111|120|RVWGAPRNSD
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 4 GAPRNSD 10
G PRN D
Sbjct: 339 GTPRNQD 345
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 4 GAPRNSD 10
G PRN D
Sbjct: 339 GTPRNQD 345
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 4 GAPRNSD 10
G PRN D
Sbjct: 339 GTPRNQD 345
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 4 GAPRNSD 10
G PRN D
Sbjct: 339 GTPRNQD 345
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 3 WGAPRNS 9
W AP NS
Sbjct: 330 WTAPNNS 336
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 RVWGAP 6
R+WG P
Sbjct: 366 RLWGHP 371
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 RVWGAP 6
R+WG P
Sbjct: 366 RLWGHP 371
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 RVWGAP 6
R+WG P
Sbjct: 366 RLWGHP 371
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 RVWGAP 6
R+WG P
Sbjct: 366 RLWGHP 371
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 RVWGAP 6
R+WG P
Sbjct: 364 RLWGHP 369
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 RVWGAP 6
R+WG P
Sbjct: 364 RLWGHP 369
>sp|VE8E2_HPV13|PROTEIN E8^E2C|Human papillomavirus 13
Query: 3 WGAPRNS 9
W AP NS
Sbjct: 140 WTAPNNS 146
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RVWGAPR 7
R W APR
Sbjct: 400 RQWSAPR 406
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RVWGAPR 7
R W APR
Sbjct: 400 RQWSAPR 406
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 173 WAVPKNDN 180
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 163 WAVPKNKN 170
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 173 WAVPKNDN 180
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VWGAP 6
VWG P
Sbjct: 1074 VWGGP 1078
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VWGAP 6
VWG P
Sbjct: 1074 VWGGP 1078
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VWGAP 6
VWG P
Sbjct: 1074 VWGGP 1078
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 3 WGAPRNSD 10
W P+N++
Sbjct: 170 WAVPKNNN 177
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 173 WAVPKNDN 180
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 173 WAVPKNDN 180
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 169 WAVPKNKN 176
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 173 WAVPKNDN 180
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 3 WGAPRN 8
WG P N
Sbjct: 625 WGTPLN 630
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 158 WAVPKNDN 165
>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 158 WAVPKNDN 165
>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 158 WAVPKNDN 165
>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 158 WAVPKNDN 165
>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 158 WAVPKNDN 165
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 158 WAVPKNDN 165
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 158 WAVPKNDN 165
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 158 WAVPKNDN 165
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 3 WGAPRNSD 10
W P+N +
Sbjct: 158 WAVPKNDN 165
24|Sequence|116|125|PRNSDPALGL
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 PRNSDPA 7
P+N++PA
Sbjct: 277 PKNAEPA 283
>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PRNSDPA 7
PR +DPA
Sbjct: 25 PRRTDPA 31
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 NSDPALGL 10
+ DPALG
Sbjct: 1268 DPDPALGF 1275
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 RNSDPALG 9
RNSDP G
Sbjct: 813 RNSDPEHG 820
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 RNSDPALGL 10
R DPA+G+
Sbjct: 2882 RAPDPAVGV 2890
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 2 RNSDPALGL 10
R DP +GL
Sbjct: 37 RRCDPQIGL 45
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 RNSDPAL 8
RN DP L
Sbjct: 1773 RNGDPRL 1779
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 RNSDPAL 8
RN DP L
Sbjct: 1765 RNGDPRL 1771
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PRNSDPALGL 10
PR+S P G+
Sbjct: 112 PRSSSPGTGV 121
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PRNSDPALGL 10
PR+S P G+
Sbjct: 112 PRSSSPGTGV 121
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 RNSDPAL 8
RN DP L
Sbjct: 1775 RNGDPRL 1781
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 RNSDPAL 8
RN DP L
Sbjct: 1766 RNGDPRL 1772
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 RNSDPAL 8
RN DP L
Sbjct: 1785 RNGDPRL 1791
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 RNSDPAL 8
RN DP L
Sbjct: 1776 RNGDPRL 1782
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 RNSDPAL 8
RN DP L
Sbjct: 1783 RNGDPRL 1789
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 RNSDPAL 8
RN DP L
Sbjct: 1775 RNGDPRL 1781
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 RNSDPAL 8
RN DP L
Sbjct: 1766 RNGDPRL 1772
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 RNSDPAL 8
RN DP L
Sbjct: 1767 RNGDPRL 1773
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 RNSDPAL 8
RN DP L
Sbjct: 1769 RNGDPRL 1775
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 RNSDPAL 8
RN DP L
Sbjct: 1767 RNGDPRL 1773
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 RNSDPAL 8
RN DP L
Sbjct: 1777 RNGDPRL 1783
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 RNSDPAL 8
RN DP L
Sbjct: 1764 RNGDPRL 1770
>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 RNSDPALGL 10
R DP +GL
Sbjct: 37 RRCDPQIGL 45
25|Sequence|121|130|PALGLDDDPD
>sp|PG082_VARV|TELOMERE-BINDING protein OPG082|Variola virus
Query: 4 GLDDDPD 10
G+DDDP+
Sbjct: 101 GIDDDPE 107
>sp|PG082_VAR67|TELOMERE-BINDING protein OPG082|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 GLDDDPD 10
G+DDDP+
Sbjct: 101 GIDDDPE 107
>sp|PG082_VACCC|TELOMERE-BINDING protein OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GLDDDPD 10
G+DDDP+
Sbjct: 101 GVDDDPE 107
>sp|PG082_MONPV|TELOMERE-BINDING protein OPG082|Monkeypox virus (MPXV)
Query: 4 GLDDDPD 10
G+DDDP+
Sbjct: 101 GVDDDPE 107
>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 5 LDDDP 9
LDDDP
Sbjct: 74 LDDDP 78
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 5 LDDDP 9
LDDDP
Sbjct: 74 LDDDP 78
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 PALGLDDDP 9
PA+ D+DP
Sbjct: 1737 PAVSRDNDP 1745
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 PALGLDDDP 9
P+L DDP
Sbjct: 754 PSLKFTDDP 762
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 PALGLDDDP 9
P+L DDP
Sbjct: 754 PSLKFTDDP 762
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 5 LDDDP 9
LDDDP
Sbjct: 1208 LDDDP 1212
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 ALGLDDD 8
ALG+DD+
Sbjct: 992 ALGMDDE 998
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 GLDDD 8
GLDDD
Sbjct: 2808 GLDDD 2812
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 ALGLDDDPD 10
LGLDD D
Sbjct: 176 GLGLDDKSD 184
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 ALGLDDDPD 10
LGLDD D
Sbjct: 176 GLGLDDKSD 184
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 ALGLDDDPD 10
LGLDD D
Sbjct: 176 GLGLDDKSD 184
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GLDDD 8
GLDDD
Sbjct: 517 GLDDD 521
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 1 PALGLDD 7
PAL +DD
Sbjct: 154 PALEIDD 160
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 LGLDDDP 9
LG+D DP
Sbjct: 578 LGVDIDP 584
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 1 PALGLDDDP 9
PA G D++P
Sbjct: 189 PAGGTDEEP 197
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GLDDD 8
GLDDD
Sbjct: 517 GLDDD 521
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GLDDD 8
GLDDD
Sbjct: 517 GLDDD 521
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 PALGLDDDP 9
PA+ D+DP
Sbjct: 1737 PAVLTDNDP 1745
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 GLDDD 8
GLDDD
Sbjct: 517 GLDDD 521
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 2 ALGLDDDPD 10
ALG++ PD
Sbjct: 624 ALGINKSPD 632
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 ALGLDDDPD 10
ALG+DD+ +
Sbjct: 992 ALGVDDEDE 1000
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GLDDD 8
GLDDD
Sbjct: 517 GLDDD 521
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GLDDD 8
GLDDD
Sbjct: 517 GLDDD 521
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 ALGLDDD 8
ALG+ DD
Sbjct: 1550 ALGIKDD 1556
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 ALGLDDD 8
ALG+ DD
Sbjct: 1550 ALGIKDD 1556
26|Sequence|126|135|DDDPDAPAAQ
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 2 DDPDAPA 8
D PDAPA
Sbjct: 220 DTPDAPA 226
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 DDPDAPAA 9
DDPD AA
Sbjct: 1483 DDPDVVAA 1490
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 DDPDAP 7
DDPD P
Sbjct: 774 DDPDTP 779
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 DDDPDAP 7
+D+PD P
Sbjct: 1673 EDEPDTP 1679
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 DPDAPAAQ 10
DP+ PA++
Sbjct: 727 DPEQPASE 734
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 1 DDDPDAPAAQ 10
+ DP +P AQ
Sbjct: 186 NQDPQSPTAQ 195
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 1 DDDPDAPAAQ 10
+ DP +P AQ
Sbjct: 181 NQDPKSPTAQ 190
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 DDDPDAPAAQ 10
D D DAPA +
Sbjct: 1692 DLDADAPALE 1701
27|Sequence|131|140|APAAQLARAL
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka
Query: 1 APAAQLARAL 10
A + QLARAL
Sbjct: 14 ASSTQLARAL 23
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 APAAQLARAL 10
A + QLARAL
Sbjct: 14 ASSTQLARAL 23
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 AAQLARAL 10
+ QLARAL
Sbjct: 1133 SVQLARAL 1140
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 AAQLARAL 10
+ QLARAL
Sbjct: 1133 SVQLARAL 1140
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 AAQLARAL 10
+ QLARAL
Sbjct: 1133 SVQLARAL 1140
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 APAAQLARAL 10
AP +ARAL
Sbjct: 142 APVGGVARAL 151
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 APAAQLARAL 10
AP +ARAL
Sbjct: 142 APVGSVARAL 151
28|Sequence|136|145|LARALLRARL
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 ARALLRARL 10
ARALLRA L
Sbjct: 916 ARALLRACL 924
29|Sequence|141|150|LRARLDPAAL
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 RARLDPAA 9
RAR+ P A
Sbjct: 3266 RARISPGA 3273
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 RARLDPAA 9
RAR+ P A
Sbjct: 3267 RARISPGA 3274
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 RARLDPAA 9
RAR+ P A
Sbjct: 3270 RARISPGA 3277
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 RARLDPAA 9
RAR+ P A
Sbjct: 3270 RARISPGA 3277
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 RARLDPAA 9
RAR+ P A
Sbjct: 3269 RARISPGA 3276
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 RARLDPAA 9
RAR+ P A
Sbjct: 3269 RARISPGA 3276
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 RARLDPAA 9
RAR+ P A
Sbjct: 3269 RARISPGA 3276
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 RARLDPAA 9
RAR+ P A
Sbjct: 3269 RARISPGA 3276
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 5 LDPAAL 10
LDPAAL
Sbjct: 20 LDPAAL 25
>sp|E1BS_ADE40|E1B protein, small T-antigen|Human adenovirus F serotype 40
Query: 1 LRARLDPAA 9
LRA LDP+
Sbjct: 157 LRAGLDPST 165
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LRARLDPAA 9
+RAR+ P A
Sbjct: 232 IRARVHPTA 240
>sp|E1BS_ADE41|E1B protein, small T-antigen|Human adenovirus F serotype 41
Query: 1 LRARLDP 7
LRA LDP
Sbjct: 160 LRAGLDP 166
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LRARLDPAA 9
+RAR+ P A
Sbjct: 232 IRARIHPTA 240
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LRARLDPAA 9
+RAR+ P A
Sbjct: 232 IRARVHPTA 240
>sp|UL24_EBVB9|PROTEIN UL24 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LRARLD 6
LRARLD
Sbjct: 189 LRARLD 194
30|Sequence|146|155|DPAALAAQLV
>sp|TEG6_HHV2H|TEGUMENT protein UL55|Human herpesvirus 2 (strain HG52)
Query: 1 DPAALAAQ 8
DPA LAA+
Sbjct: 41 DPACLAAR 48
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 DPAALAAQL 9
+ AAL+AQL
Sbjct: 1090 ESAALSAQL 1098
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 1 DPAALAAQL 9
DP ALAA++
Sbjct: 161 DPMALAARV 169
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 PAALAAQ 8
PAA AAQ
Sbjct: 1242 PAAYAAQ 1248
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PAALAAQ 8
PAA AAQ
Sbjct: 1241 PAAYAAQ 1247
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PAALAAQ 8
PAA AAQ
Sbjct: 1241 PAAYAAQ 1247
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PAALAAQ 8
PAA AAQ
Sbjct: 1241 PAAYAAQ 1247
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 PAALAAQ 8
PAA AAQ
Sbjct: 1243 PAAYAAQ 1249
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PAALAAQ 8
PAA AAQ
Sbjct: 1241 PAAYAAQ 1247
31|Sequence|151|160|AAQLVPAPVP
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 AQLVPAPV 9
A L+PAP+
Sbjct: 989 AALIPAPI 996
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 LVPAPVP 10
L PAP+P
Sbjct: 368 LTPAPIP 374
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 LVPAPVP 10
L PAP+P
Sbjct: 368 LTPAPIP 374
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 LVPAPVP 10
L PAP+P
Sbjct: 373 LTPAPIP 379
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 2 AQLVPAPVP 10
L PAPVP
Sbjct: 480 GSLTPAPVP 488
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 AAQLVPAPVP 10
AA++VP P P
Sbjct: 434 AARVVPVPAP 443
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 LVPAPVP 10
L PAP+P
Sbjct: 373 LTPAPIP 379
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 LVPAPVP 10
L PAP+P
Sbjct: 368 LTPAPIP 374
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 LVPAPVP 10
L PAP+P
Sbjct: 368 LTPAPIP 374
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 QLVPAPVP 10
QL+PAP P
Sbjct: 562 QLLPAPGP 569
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 QLVPAPVP 10
QL+PAP P
Sbjct: 562 QLLPAPGP 569
32|Sequence|156|165|PAPVPAAALR
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 219 PGPLPAGQLR 228
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 216 PGPMPAGQLR 225
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 221 PGPLPAGQLR 230
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 222 PGPLPAGQLR 231
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 221 PGPLPAGQLR 230
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 221 PGPLPAGQLR 230
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 221 PGPLPAGQLR 230
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 216 PGPLPAGQLR 225
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 221 PGPLPAGQLR 230
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 216 PGPMPAGQLR 225
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 221 PGPLPAGQLR 230
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 221 PGPLPAGQLR 230
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 2 APVPAAA 8
APVPA A
Sbjct: 5 APVPAGA 11
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 2 APVPAAA 8
APVPA A
Sbjct: 5 APVPAGA 11
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 221 PGPLPAGQLR 230
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 216 PGPMPAGQLR 225
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 222 PGPLPAGQLR 231
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 216 PGPLPAGQLR 225
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 221 PGPLPAGQLR 230
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 219 PGPLPAGQLR 228
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 221 PGPLPAGQLR 230
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 221 PGPLPAGQLR 230
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 221 PGPLPAGQLR 230
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 PAPVPA 6
PAP PA
Sbjct: 753 PAPKPA 758
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 221 PGPLPAGQLR 230
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 221 PGPLPAGQLR 230
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 PAPVPAAA 8
P P P AA
Sbjct: 344 PRPAPGAA 351
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PAPVPAAALR 10
P P+PA LR
Sbjct: 216 PGPMPAGQLR 225
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 PAPVPAA 7
P+P+P A
Sbjct: 232 PSPLPTA 238
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 1 PAPVPAAA 8
P P P AA
Sbjct: 224 PVPAPVAA 231
>sp|UL125_HCMVA|UNCHARACTERIZED protein UL125|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PAPVPAAALR 10
P+PVPA ++
Sbjct: 47 PSPVPAVFIK 56
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 PAPVPAA 7
PAPVP+A
Sbjct: 280 PAPVPSA 286
>sp|UL91_HCMVM|PROTEIN UL91|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PAPVPAA 7
P+PVP+A
Sbjct: 86 PSPVPSA 92
>sp|UL91_HCMVA|PROTEIN UL91|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PAPVPAA 7
P+PVP+A
Sbjct: 86 PSPVPSA 92
33|Sequence|161|170|AAALRPRPPV
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 AALRPRPPV 10
A RP+PPV
Sbjct: 155 APRRPKPPV 163
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 RPRPPV 10
+PRPP+
Sbjct: 5495 KPRPPL 5500
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 RPRPPV 10
+PRPP+
Sbjct: 5472 KPRPPL 5477
>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)
Query: 1 AAALRPRP 8
+ ++RPRP
Sbjct: 231 SGSVRPRP 238
>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 AAALRPRP 8
+ ++RPRP
Sbjct: 231 SGSVRPRP 238
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 AAALRPRPP 9
A+ RP PP
Sbjct: 1736 ASGTRPLPP 1744
>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64
Query: 5 RPRPP 9
RP+PP
Sbjct: 117 RPQPP 121
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 3 ALRPRPPV 10
L PRPPV
Sbjct: 84 GLAPRPPV 91
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 AAALRPRPP 9
AAAL+P P
Sbjct: 1266 AAALKPDGP 1274
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 ALRPRPP 9
+LRP PP
Sbjct: 299 SLRPAPP 305
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 ALRPRPP 9
+LRP PP
Sbjct: 299 SLRPAPP 305
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 5 RPRPP 9
RP+PP
Sbjct: 455 RPQPP 459
>sp|BLLF2_EBVB9|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 RPRPPV 10
RPRPPV
Sbjct: 45 RPRPPV 50
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 5 RPRPP 9
RPRPP
Sbjct: 285 RPRPP 289
>sp|BLLF2_EBVA8|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 RPRPPV 10
RPRPPV
Sbjct: 45 RPRPPV 50
>sp|BLLF2_EBVG|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 RPRPPV 10
RPRPPV
Sbjct: 45 RPRPPV 50
34|Sequence|166|175|PRPPVYDDGP
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1
Query: 1 PRPPVYD 7
P PPVY+
Sbjct: 109 PAPPVYN 115
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLKLPDGP 274
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 261 PRPLRLPDGP 270
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 258 PRPLRLPDGP 267
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 242 PRPLRLPDGP 251
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 PPVYDD 8
PPVY D
Sbjct: 447 PPVYTD 452
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 258 PRPLRLPDGP 267
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 PRPPVYDD 8
PRP +DD
Sbjct: 747 PRPTAWDD 754
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 1 PRPPVYDDGP 10
PRP DGP
Sbjct: 265 PRPLRLPDGP 274
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 RPPVYDDGP 10
RPP+ GP
Sbjct: 376 RPPITKPGP 384
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 PRPPVYDDGP 10
P+PP GP
Sbjct: 375 PQPPTTKPGP 384
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 PRPPVYDDG 9
P+P Y DG
Sbjct: 2914 PQPYCYTDG 2922
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 PRPPVYDDG 9
P+P Y DG
Sbjct: 2914 PQPYCYTDG 2922
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 PRPPVYDD 8
PRP +DD
Sbjct: 741 PRPSSWDD 748
>sp|E311_ADE05|EARLY E3A 10.5 kDa glycoprotein|Human adenovirus C serotype 5
Query: 2 RPPVY 6
RPP+Y
Sbjct: 61 RPPIY 65
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RPPVYDDG 9
+ P+Y+DG
Sbjct: 234 KTPLYEDG 241
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 PRPPVYDDGP 10
P PP GP
Sbjct: 184 PTPPATAQGP 193
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 PRPPVYDDG 9
P P Y DG
Sbjct: 2972 PHPYCYSDG 2980
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 PRPPVYDDG 9
P P Y DG
Sbjct: 3002 PHPYCYSDG 3010
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 PRPPVYDDG 9
P P Y DG
Sbjct: 2972 PHPYCYSDG 2980
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 PRPPVYDDG 9
P P Y DG
Sbjct: 3002 PHPYCYSDG 3010
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 PRPPVYDDG 9
P P Y DG
Sbjct: 2952 PHPYCYTDG 2960
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 PRPPVYDDG 9
P P Y DG
Sbjct: 2952 PHPYCYTDG 2960
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 VYDDG 9
VYDDG
Sbjct: 3700 VYDDG 3704
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 5 VYDDG 9
VYDDG
Sbjct: 1075 VYDDG 1079
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 5 VYDDG 9
VYDDG
Sbjct: 1076 VYDDG 1080
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 5 VYDDG 9
VYDDG
Sbjct: 1075 VYDDG 1079
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 5 VYDDG 9
VYDDG
Sbjct: 1080 VYDDG 1084
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 5 VYDDG 9
VYDDG
Sbjct: 1075 VYDDG 1079
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 5 VYDDG 9
VYDDG
Sbjct: 1077 VYDDG 1081
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 5 VYDDG 9
VYDDG
Sbjct: 1082 VYDDG 1086
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 5 VYDDG 9
VYDDG
Sbjct: 1079 VYDDG 1083
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 VYDDG 9
VYDDG
Sbjct: 3700 VYDDG 3704
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 5 VYDDG 9
VYDDG
Sbjct: 1080 VYDDG 1084
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 PRPPVYDDGP 10
P PV DD P
Sbjct: 514 PTAPVLDDIP 523
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 5 VYDDG 9
VYDDG
Sbjct: 1077 VYDDG 1081
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 5 VYDDGP 10
+YD GP
Sbjct: 1016 IYDTGP 1021
>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain
Query: 5 VYDDGP 10
+YDD P
Sbjct: 77 IYDDTP 82
>sp|E311_ADE06|EARLY E3A 11.6 kDa glycoprotein|Human adenovirus C serotype 6
Query: 2 RPPVY 6
RPP+Y
Sbjct: 68 RPPIY 72
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 PRPPVYDDG 9
P P + +DG
Sbjct: 640 PNPTIENDG 648
>sp|ADP_ADE02|ADENOVIRUS death protein|Human adenovirus C serotype 2
Query: 2 RPPVY 6
RPP+Y
Sbjct: 68 RPPIY 72
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 1 PRPPVYDDG 9
P P + +DG
Sbjct: 360 PNPTIENDG 368
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 PRPPVYDDG 9
P P + +DG
Sbjct: 640 PNPTIENDG 648
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 1 PRPPVYDDG 9
P P + +DG
Sbjct: 360 PNPTIENDG 368
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 1 PRPPVYDDG 9
P P + +DG
Sbjct: 360 PNPTIENDG 368
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 1 PRPPVYDDG 9
P P + +DG
Sbjct: 360 PNPTIENDG 368
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 1 PRP--------PVYDDG 9
PRP PVY DG
Sbjct: 326 PRPKDGTGSCGPVYVDG 342
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 1 PRP--------PVYDDG 9
PRP PVY DG
Sbjct: 326 PRPKDGTGSCGPVYVDG 342
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 2 RPPVYDD 8
+PPVY++
Sbjct: 56 QPPVYNE 62
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 RPPVY 6
RPP+Y
Sbjct: 426 RPPIY 430
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 4 PVYDDG 9
P+YD G
Sbjct: 288 PLYDSG 293
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PRPPVYDD 8
PR P +DD
Sbjct: 447 PRSPRFDD 454
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PRPPVYDD 8
PR P +DD
Sbjct: 447 PRSPRFDD 454
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 1 PRP--------PVYDDG 9
PRP PVY DG
Sbjct: 326 PRPKDGKGSCGPVYVDG 342
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 1 PRP--------PVYDDG 9
PRP PVY DG
Sbjct: 311 PRPEDGTGSCGPVYVDG 327
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PVYDDG 9
PVYD G
Sbjct: 130 PVYDSG 135
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 4 PVYDDG 9
PVYD G
Sbjct: 130 PVYDSG 135
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 PRPPVY 6
PRPP++
Sbjct: 374 PRPPLF 379
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 PRPPVY 6
PRPP++
Sbjct: 374 PRPPLF 379
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 1 PRP--------PVYDDG 9
PRP PVY DG
Sbjct: 326 PRPKDGKGNCGPVYVDG 342
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 1 PRP--------PVYDDG 9
PRP PVY DG
Sbjct: 326 PRPKDGKGSCGPVYVDG 342
35|Sequence|171|180|YDDGPAGPDA
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 YDDGPAGP 8
YDDG GP
Sbjct: 192 YDDGETGP 199
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 DDGPAGPD 9
DDGP G D
Sbjct: 580 DDGPLGND 587
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 YDDGPAGPDA 10
+D P GPDA
Sbjct: 2350 FDSRPGGPDA 2359
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 DDGPAGPD 9
DDGP G +
Sbjct: 580 DDGPLGQE 587
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 DDGPAG 7
DDGP G
Sbjct: 588 DDGPLG 593
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 5 PAGPDA 10
PA PDA
Sbjct: 213 PASPDA 218
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DDGPAGPDA 10
DD PA DA
Sbjct: 64 DDAPASDDA 72
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DDGPAGPDA 10
DD PA DA
Sbjct: 64 DDAPASDDA 72
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 DGPAGPD 9
DGP PD
Sbjct: 66 DGPYTPD 72
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DDGPAGPD 9
DDG AG D
Sbjct: 2374 DDGDAGSD 2381
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DDGPAGPD 9
DDG AG D
Sbjct: 2374 DDGDAGSD 2381
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 4 GPAGPD 9
GPAG D
Sbjct: 337 GPAGKD 342
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 PAGPD 9
P+GPD
Sbjct: 125 PSGPD 129
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 GPAGPD 9
GP GP+
Sbjct: 4203 GPKGPE 4208
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 GPAGPD 9
GP GP+
Sbjct: 4203 GPKGPE 4208
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 YDDGP 5
Y+DGP
Sbjct: 407 YEDGP 411
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 1 YDDGPA 6
+DDGP
Sbjct: 309 HDDGPG 314
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 1 YDDGPA 6
+DDGP
Sbjct: 309 HDDGPG 314
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 DDGPAGP 8
DD AGP
Sbjct: 1553 DDAVAGP 1559
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 DDGPAGP 8
DD AGP
Sbjct: 1553 DDAVAGP 1559
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 DDGPAGP 8
DD AGP
Sbjct: 1553 DDAVAGP 1559
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 DDGPAGP 8
DD AGP
Sbjct: 1553 DDAVAGP 1559
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 2 DDGPAGPDA 10
+D P GPD+
Sbjct: 24 EDTPRGPDS 32
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 2 DDGPAGPDA 10
D GP PDA
Sbjct: 216 DGGPRTPDA 224
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 1 YDDGPAG 7
YD PAG
Sbjct: 329 YDQSPAG 335
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 1 YDDGPAG 7
YD PAG
Sbjct: 329 YDQSPAG 335
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 1 YDDGPAG 7
YD PAG
Sbjct: 329 YDQSPAG 335
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 1 YDDGPAG 7
YD PAG
Sbjct: 329 YDQSPAG 335
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 1 YDDGPAG 7
YD PAG
Sbjct: 329 YDQSPAG 335
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 1 YDDGPAG 7
YD PAG
Sbjct: 329 YDQSPAG 335
>sp|VP2_POVBA|MINOR capsid protein VP2|BK polyomavirus (strain AS) (BKPyV)
Query: 1 YDDGP 5
Y+DGP
Sbjct: 312 YEDGP 316
>sp|VP2_POVBK|MINOR capsid protein VP2|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 YDDGP 5
Y+DGP
Sbjct: 312 YEDGP 316
>sp|TRM2_HHV2H|TRIPARTITE terminase subunit 2|Human herpesvirus 2 (strain HG52)
Query: 3 DGPAGP 8
DGPA P
Sbjct: 89 DGPAAP 94
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DDGPAGPD 9
D PAG D
Sbjct: 448 DPSPAGAD 455
36|Sequence|176|185|AGPDAEEAGD
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 3 PDAEEAGD 10
PDAE GD
Sbjct: 293 PDAENLGD 300
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 3 PDAEEAGD 10
PDAE GD
Sbjct: 293 PDAENLGD 300
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GPDAEEAG 9
G DA EAG
Sbjct: 42 GKDAREAG 49
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GPDAEEAG 9
G DA EAG
Sbjct: 42 GKDAREAG 49
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GPDAEEAG 9
G DA EAG
Sbjct: 42 GKDAREAG 49
>sp|UL121_HCMVA|MEMBRANE protein UL121|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DAEEAGD 10
D EE GD
Sbjct: 71 DGEEGGD 77
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 3 PDAEEAGD 10
PD E GD
Sbjct: 657 PDTHEPGD 664
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 GPDAEEAGD 10
GPD E G+
Sbjct: 518 GPDTEGNGE 526
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GPDAEEAG 9
GP AEE+G
Sbjct: 535 GPLAEESG 542
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 PDAEEAG 9
P AEE G
Sbjct: 71 PSAEECG 77
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 PDAEEAG 9
P AEE G
Sbjct: 71 PSAEECG 77
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 PDAEEAG 9
P AEE G
Sbjct: 71 PSAEECG 77
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 PDAEEAG 9
P AEE G
Sbjct: 71 PSAEECG 77
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PDAEEAG 9
P AEE G
Sbjct: 71 PSAEECG 77
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 PDAEEAG 9
P AEE G
Sbjct: 71 PSAEECG 77
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PDAEEAG 9
P AEE G
Sbjct: 71 PSAEECG 77
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 PDAEEAG 9
P AEE G
Sbjct: 71 PSAEECG 77
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 3 PDAEEAG 9
P AEE G
Sbjct: 71 PSAEECG 77
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 AGPDAEEAGD 10
AGP EAG+
Sbjct: 491 AGPPVAEAGE 500
37|Sequence|181|190|EEAGDETPDV
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 4 GDETPDV 10
G+ETPD+
Sbjct: 220 GNETPDI 226
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 4 GDETPDV 10
G+ETPD+
Sbjct: 220 GNETPDI 226
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 4 GDETPDV 10
G+ETPD+
Sbjct: 225 GNETPDI 231
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 4 GDETPDV 10
G+ETPD+
Sbjct: 220 GNETPDI 226
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 4 GDETPDV 10
G+ETPD+
Sbjct: 220 GNETPDI 226
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 4 GDETPDV 10
G+ETPD+
Sbjct: 220 GNETPDI 226
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 4 GDETPDV 10
G+ETPD+
Sbjct: 225 GNETPDI 231
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 4 GDETPDV 10
G+ETPD+
Sbjct: 225 GNETPDI 231
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EEAGDETPDV 10
EEA E+P+V
Sbjct: 399 EEASRESPEV 408
>sp|ORF35_HHV8P|PROTEIN ORF35|Human herpesvirus 8 type P
Query: 1 EEAGDETP 8
EE G+ETP
Sbjct: 116 EENGEETP 123
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 1 EEAGDETP 8
+E GD TP
Sbjct: 540 QETGDTTP 547
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 EEAGDE 6
+EAGDE
Sbjct: 903 DEAGDE 908
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 EEAGDE 6
+EAGDE
Sbjct: 903 DEAGDE 908
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 EEAGDE 6
+EAGDE
Sbjct: 903 DEAGDE 908
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 EEAGDE 6
+EAGDE
Sbjct: 903 DEAGDE 908
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 EEAGDE 6
+EAGDE
Sbjct: 903 DEAGDE 908
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 EEAGDE 6
+EAGDE
Sbjct: 903 DEAGDE 908
>sp|PKG2_ADE02|PACKAGING protein 2|Human adenovirus C serotype 2
Query: 1 EEAGDETP 8
EE DETP
Sbjct: 49 EEVSDETP 56
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 3 AGDETPD 9
AGD PD
Sbjct: 294 AGDTVPD 300
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 4 GDETPDV 10
G+E PD+
Sbjct: 225 GNEKPDI 231
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 EEAGDETP 8
E AGDE P
Sbjct: 54 EMAGDEPP 61
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 1 EEAGDETP 8
E AGDE P
Sbjct: 54 EMAGDEPP 61
38|Sequence|186|195|ETPDVDPELL
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 TPDVDPELL 10
T D+DPELL
Sbjct: 1021 TNDIDPELL 1029
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TPDVDPELL 10
T D+DPELL
Sbjct: 1021 TNDIDPELL 1029
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 TPDVDPE 8
TPDVDP+
Sbjct: 1022 TPDVDPD 1028
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 ETPDVD 6
ETPD+D
Sbjct: 222 ETPDID 227
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 1 ETPDVD 6
ETPD+D
Sbjct: 222 ETPDID 227
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 1 ETPDVD 6
ETPD+D
Sbjct: 227 ETPDID 232
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 ETPDVD 6
ETPD+D
Sbjct: 222 ETPDID 227
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 ETPDVD 6
ETPD+D
Sbjct: 222 ETPDID 227
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 1 ETPDVD 6
ETPD+D
Sbjct: 227 ETPDID 232
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 1 ETPDVD 6
ETPD+D
Sbjct: 222 ETPDID 227
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 ETPDVD 6
ETPD+D
Sbjct: 227 ETPDID 232
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 1 ETPDVDP 7
E+PD++P
Sbjct: 350 ESPDINP 356
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 TPDVDPELL 10
TPD+ ELL
Sbjct: 352 TPDLTAELL 360
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 TPDVDPELL 10
TPD+ ELL
Sbjct: 352 TPDLTAELL 360
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ETPDVDPELL 10
E D DPE++
Sbjct: 1076 ENLDCDPEVM 1085
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ETPDVDPELL 10
E D DPE++
Sbjct: 1076 ENLDCDPEVM 1085
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 ETPDVDPELL 10
E D DP++L
Sbjct: 969 EIKDFDPDIL 978
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 PDVDPELL 10
P+VD EL+
Sbjct: 893 PNVDGELM 900
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 VDPELL 10
VDPELL
Sbjct: 2287 VDPELL 2292
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 ETPDVDPELL 10
E PD+D E
Sbjct: 255 EEPDIDMEFF 264
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 PDVDPE 8
PD++PE
Sbjct: 2402 PDLEPE 2407
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 ETPDVDPELL 10
E D DP+LL
Sbjct: 955 EIRDFDPDLL 964
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 ETPDVDPELL 10
E PD+D E
Sbjct: 251 EEPDIDMEFF 260
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 PDVDPE 8
PD++PE
Sbjct: 2406 PDLEPE 2411
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 ETPDVDPEL 9
+TP DP +
Sbjct: 737 QTPPADPRV 745
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 4 DVDPEL 9
D+DPEL
Sbjct: 401 DMDPEL 406
>sp|E310_ADE12|EARLY E3B 10.4 kDa protein|Human adenovirus A serotype 12
Query: 4 DVDPELL 10
D+DPE L
Sbjct: 25 DLDPECL 31
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 ETPDVDPELL 10
E +VDP+LL
Sbjct: 1914 EGHEVDPQLL 1923
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PDVDPEL 9
PD DP +
Sbjct: 312 PDADPPI 318
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 3 PDVDPEL 9
PD DP +
Sbjct: 312 PDADPPI 318
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 ETPDVDPELL 10
+TP V PE L
Sbjct: 1658 DTPVVQPERL 1667
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 4 DVDPEL 9
D+DPEL
Sbjct: 401 DMDPEL 406
>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)
Query: 4 DVDPEL 9
D+DPEL
Sbjct: 400 DMDPEL 405
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 ETPDVDPELL 10
E D DP+++
Sbjct: 965 EIKDFDPDII 974
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 ETPDVDPELL 10
+ PD DP ++
Sbjct: 2307 KAPDYDPPVV 2316
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 4 DVDPEL 9
D+DPEL
Sbjct: 401 DMDPEL 406
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 4 DVDPEL 9
D+DPEL
Sbjct: 400 DMDPEL 405
39|Sequence|191|200|DPELLRYLLG
>sp|VP1_POVBA|MAJOR capsid protein VP1|BK polyomavirus (strain AS) (BKPyV)
Query: 1 DPELLRYL 8
DP+++RY+
Sbjct: 344 DPDMIRYI 351
>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 DPELLRYL 8
DP+++RY+
Sbjct: 344 DPDMIRYI 351
>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)
Query: 1 DPELLRYL 8
DP+++RY+
Sbjct: 336 DPDMMRYV 343
>sp|VE4_HPV58|PROTEIN E4|Human papillomavirus 58
Query: 1 DPELLRYLL 9
DPE+++Y L
Sbjct: 3 DPEVIKYPL 11
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 DPELLRYL 8
DP+L +YL
Sbjct: 1661 DPDLQKYL 1668
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 PELLRY 7
PELLR+
Sbjct: 2123 PELLRH 2128
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 PELLRY 7
PELLR+
Sbjct: 2123 PELLRH 2128
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 PELLRY 7
PELLR+
Sbjct: 2123 PELLRH 2128
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 PELLRY 7
PELLR+
Sbjct: 2123 PELLRH 2128
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 PELLRY 7
PELLR+
Sbjct: 2123 PELLRH 2128
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 PELLRY 7
PELLR+
Sbjct: 2123 PELLRH 2128
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 1 DPELLRYL 8
DP LLR+L
Sbjct: 239 DPPLLRHL 246
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 1 DPELLRYL 8
DP LLR+L
Sbjct: 239 DPPLLRHL 246
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 1 DPELLRYL 8
DP LLR+L
Sbjct: 239 DPPLLRHL 246
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 PELLRYLL 9
P+LL+Y+
Sbjct: 713 PQLLQYMF 720
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 PELLRYLL 9
P+LL+Y+
Sbjct: 713 PQLLQYMF 720
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 PELLRYLL 9
P+LL+Y+
Sbjct: 713 PQLLQYMF 720
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DPELLRYL 8
DP LLR+L
Sbjct: 239 DPPLLRHL 246
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 1 DPELLRYL 8
DP LLR+L
Sbjct: 239 DPPLLRHL 246
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 1 DPELLRYL 8
DP LLR+L
Sbjct: 239 DPPLLRHL 246
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 1 DPELLRYL 8
DP LLR+L
Sbjct: 239 DPPLLRHL 246
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 1 DPELLRYL 8
DP LLR+L
Sbjct: 239 DPPLLRHL 246
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DPELLRYL 8
DP LLR+L
Sbjct: 239 DPPLLRHL 246
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 1 DPELLRYL 8
DP LLR+L
Sbjct: 239 DPPLLRHL 246
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 1 DPELLRYL 8
DP LLR+L
Sbjct: 239 DPPLLRHL 246
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 1 DPELLRYLL 9
DP+++ Y+L
Sbjct: 351 DPKVVEYIL 359
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 PELLRYL 8
P+LL+Y+
Sbjct: 713 PQLLQYM 719
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 PELLRYL 8
P+LL+Y+
Sbjct: 713 PQLLQYM 719
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DPELLRYLL 9
DP+++ Y+L
Sbjct: 352 DPKVVEYIL 360
>sp|MATRX_VSIVG|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 DPELLRY 7
DP LRY
Sbjct: 55 DPNQLRY 61
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 ELLRYLL 9
+LLRY+L
Sbjct: 1198 DLLRYVL 1204
>sp|MATRX_VSIVS|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 DPELLRY 7
DP LRY
Sbjct: 55 DPNQLRY 61
>sp|MATRX_VSIVC|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 DPELLRY 7
DP LRY
Sbjct: 55 DPNQLRY 61
>sp|MATRX_VSIVN|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 DPELLRY 7
DP LRY
Sbjct: 55 DPNQLRY 61
>sp|MATRX_VSIVA|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 DPELLRY 7
DP LRY
Sbjct: 55 DPNQLRY 61
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 DPELLRYLLG 10
DP L R +LG
Sbjct: 2493 DPFLARAILG 2502
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DPELLRYLLG 10
DPE LLG
Sbjct: 842 DPETAAALLG 851
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DPELLRYLLG 10
DPE LLG
Sbjct: 842 DPETAAALLG 851
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DPELLRYLLG 10
DPE LLG
Sbjct: 842 DPETAAALLG 851
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 DPELLRYL 8
DP++LR+
Sbjct: 1996 DPKILRHF 2003
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 DPELLRYL 8
DP++LR+
Sbjct: 1996 DPKILRHF 2003
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 DPELLRYL 8
DP++LR+
Sbjct: 1996 DPKILRHF 2003
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 DPELLRYL 8
DP++LR+
Sbjct: 1996 DPKILRHF 2003
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 DPELLRYL 8
DP++LR+
Sbjct: 1996 DPKILRHF 2003
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 DPELLRYL 8
DP++LR+
Sbjct: 1996 DPKILRHF 2003
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 DPELLRYL 8
DP++LR+
Sbjct: 1996 DPKILRHF 2003
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 DPELLRYL 8
DP++LR+
Sbjct: 1997 DPKILRHF 2004
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 DPELLRYL 8
DP++LR+
Sbjct: 1996 DPKILRHF 2003
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 DPELLRYL 8
DP++LR+
Sbjct: 1996 DPKILRHF 2003
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 DPELLRYL 8
DP++LR+
Sbjct: 1996 DPKILRHF 2003
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 DPELLRYL 8
DP++LR+
Sbjct: 1997 DPKILRHF 2004
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 DPELLR 6
DP+LLR
Sbjct: 1919 DPQLLR 1924
40|Sequence|196|205|RYLLGRILAG
>sp|NSP4_ROTHC|NON-STRUCTURAL glycoprotein 4|Rotavirus C (isolate RVC/Human/United
Query: 2 YLLGRILA 9
YLLG ILA
Sbjct: 22 YLLGLILA 29
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 RYLLGRILAG 10
RY +GR AG
Sbjct: 279 RYCVGRADAG 288
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 YLLGRILA 9
+LLGRI A
Sbjct: 356 FLLGRIRA 363
41|Sequence|201|210|RILAGSADSE
>sp|UL21A_HCMVM|UNCHARACTERIZED protein UL21A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RILAGSADSE 10
R+L G D E
Sbjct: 55 RVLVGEGDEE 64
>sp|UL21A_HCMVA|UNCHARACTERIZED protein UL21A|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RILAGSADSE 10
R+L G D E
Sbjct: 55 RVLVGEGDEE 64
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 1 RILAGSADS 9
R+LAG+A +
Sbjct: 32 RLLAGAASA 40
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 RILAGSAD 8
R+LAG+ D
Sbjct: 204 RVLAGTYD 211
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 LAGSADS 9
+AGS+DS
Sbjct: 597 IAGSSDS 603
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 LAGSADS 9
+AGS+DS
Sbjct: 597 IAGSSDS 603
42|Sequence|206|215|SADSEGVAAP
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 3 DSEGVAAP 10
D EGVA P
Sbjct: 56 DGEGVATP 63
43|Sequence|211|220|GVAAPRRLRR
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 VAAPRRLRR 10
+A PRR+R+
Sbjct: 837 IAIPRRIRQ 845
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 VAAPRRLRR 10
+A PRR+R+
Sbjct: 842 IAIPRRIRQ 850
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 VAAPRRLRR 10
+A PRR+R+
Sbjct: 831 LAVPRRIRQ 839
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 VAAPRRLRR 10
+A PRR+R+
Sbjct: 844 LAVPRRIRQ 852
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 VAAPRRLRR 10
+A PRR+R+
Sbjct: 843 LAVPRRIRQ 851
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 VAAPRRLRR 10
+A PRR+R+
Sbjct: 836 LAVPRRIRQ 844
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 VAAPRRLRR 10
+A PRR+R+
Sbjct: 844 LAVPRRIRQ 852
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 VAAPRRLRR 10
+A PRR+R+
Sbjct: 842 LAVPRRIRQ 850
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 VAAPRRLRR 10
+A PRR+R+
Sbjct: 841 LAVPRRIRQ 849
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 APRRLRR 10
+PRRLR+
Sbjct: 386 SPRRLRQ 392
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 VAAPRRLRR 10
+A PRR+R+
Sbjct: 845 LAVPRRIRQ 853
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 APRRLRR 10
APRRL++
Sbjct: 889 APRRLKK 895
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 3 AAPRRLRR 10
A PRR+ R
Sbjct: 234 ATPRRVNR 241
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 VAAPRRLR 9
+A PRR+R
Sbjct: 536 MARPRRVR 543
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 AAPRRLR 9
AAP RLR
Sbjct: 892 AAPNRLR 898
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GVAAPRRLR 9
G+AAPR R
Sbjct: 492 GLAAPRAER 500
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AAPRRL 8
AAPRRL
Sbjct: 4 AAPRRL 9
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 AAPRRL 8
AAPRRL
Sbjct: 4 AAPRRL 9
44|Sequence|216|225|RRLRRAADHD
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 2 RLRRAADH 9
RLR+ ADH
Sbjct: 309 RLRKYADH 316
>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)
Query: 1 RRLRRAA 7
RRLRRA+
Sbjct: 7 RRLRRAS 13
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 2 RLRRAADH 9
RLR+ +DH
Sbjct: 305 RLRKHSDH 312
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 RRAADH 9
RRA DH
Sbjct: 2559 RRAVDH 2564
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 2 RLRRAADH 9
RLR+ +DH
Sbjct: 111 RLRKHSDH 118
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LRRAADH 9
LRR A+H
Sbjct: 109 LRRCAEH 115
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 RLRRAADHD 10
R+RR D D
Sbjct: 328 RVRRVIDED 336
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RLRRAADHD 10
R+RR D D
Sbjct: 328 RVRRVIDED 336
45|Sequence|221|230|AADHDVGSEL
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ADHDVGSEL 10
DH+V SEL
Sbjct: 85 GDHNVPSEL 93
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ADHDVGSEL 10
DH+V SEL
Sbjct: 85 GDHNVPSEL 93
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 HDVGSEL 10
HDV SE+
Sbjct: 1837 HDVSSEI 1843
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 3 DHDVGSEL 10
D D+G+EL
Sbjct: 277 DKDLGAEL 284
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 DHDVGS 8
DHD+G+
Sbjct: 463 DHDMGT 468
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 DHDVGS 8
DHD+G+
Sbjct: 463 DHDMGT 468
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 AADHDVGSE 9
++D D GSE
Sbjct: 199 SSDEDTGSE 207
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 AADHDVGSEL 10
A DH +GS L
Sbjct: 550 AHDHLIGSYL 559
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 AADHDVGSEL 10
A DH +GS L
Sbjct: 550 AHDHLIGSYL 559
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DHDVGSEL 10
DH++ SE+
Sbjct: 482 DHNLSSEI 489
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DHDVGSEL 10
DH++ SE+
Sbjct: 482 DHNLSSEI 489
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 3 DHDVGSEL 10
D D+GS L
Sbjct: 277 DRDLGSSL 284
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DHDVGSEL 10
D D+GS L
Sbjct: 277 DRDLGSSL 284
46|Sequence|226|235|VGSELPPEGV
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 GSELPPEGV 10
G +PPEGV
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 GSELPPEGV 10
G +PPEGV
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 GSELPPEGV 10
G +PPEGV
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 GSELPPEGV 10
G +PPEGV
Sbjct: 142 GLRIPPEGV 150
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 GSELPPEGV 10
G +PPEGV
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 GSELPPEGV 10
G +PPEGV
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 GSELPPEGV 10
G +PPEGV
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 GSELPPEGV 10
G +PPEGV
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 GSELPPEGV 10
G +PPEGV
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 GSELPPEGV 10
G +PPEGV
Sbjct: 142 GLRIPPEGV 150
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 GSELPPEGV 10
G +PPEGV
Sbjct: 143 GLRIPPEGV 151
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 GSELPPEGV 10
G + PPEGV
Sbjct: 143 GLKTPPEGV 151
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 ELPPEG 9
E PPEG
Sbjct: 693 EYPPEG 698
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 ELPPEG 9
E PPEG
Sbjct: 693 EYPPEG 698
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 ELPPEG 9
E PPEG
Sbjct: 692 EYPPEG 697
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 ELPPEG 9
E PPEG
Sbjct: 692 EYPPEG 697
>sp|HBZ_HTL1L|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 1 VGSELPPEG 9
VG E PP G
Sbjct: 65 VGEEAPPRG 73
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 6 PPEGV 10
PPEGV
Sbjct: 2896 PPEGV 2900
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 6 PPEGV 10
PPEGV
Sbjct: 2896 PPEGV 2900
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 6 PPEGV 10
PPEGV
Sbjct: 2893 PPEGV 2897
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 1 VGSELPPEGV 10
V S+LPP G+
Sbjct: 330 VKSQLPPRGL 339
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 VGSELPPEGV 10
V S+LPP G+
Sbjct: 330 VKSQLPPRGL 339
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 2 GSE---LPPEGV 10
GSE LPP+GV
Sbjct: 119 GSECLPLPPDGV 130
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 GSE---LPPEGV 10
GSE LPP+GV
Sbjct: 119 GSECLPLPPDGV 130
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 GSELPPEG 9
G E+PP G
Sbjct: 560 GGEVPPAG 567
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 GSE---LPPEGV 10
GSE LPP+GV
Sbjct: 119 GSECLPLPPDGV 130
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 2 GSE---LPPEGV 10
GSE LPP+GV
Sbjct: 119 GSECLPLPPDGV 130
>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka
Query: 3 SELPP 7
SELPP
Sbjct: 3 SELPP 7
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 2 GSE---LPPEGV 10
GSE LPP+GV
Sbjct: 119 GSECLPLPPDGV 130
>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain
Query: 3 SELPP 7
SELPP
Sbjct: 3 SELPP 7
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 GSELPP 7
GSE PP
Sbjct: 194 GSESPP 199
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2160 VGSQLPCE 2167
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2156 VGSQLPCE 2163
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2160 VGSQLPCE 2167
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2160 VGSQLPCE 2167
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VGSELPPEGV 10
VG+++P GV
Sbjct: 430 VGNDIPNHGV 439
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 5 LPPEGV 10
LPP+GV
Sbjct: 125 LPPDGV 130
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 5 LPPEGV 10
LPP+GV
Sbjct: 125 LPPDGV 130
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 5 LPPEGV 10
LPP+GV
Sbjct: 125 LPPDGV 130
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2156 VGSQLPCE 2163
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 1 VGSELPPEGV 10
+ S+LPP G+
Sbjct: 329 IKSQLPPRGL 338
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 1 VGSELPPEGV 10
+ S+LPP G+
Sbjct: 329 IKSQLPPRGL 338
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2156 VGSQLPCE 2163
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2156 VGSQLPCE 2163
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2156 VGSQLPCE 2163
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2160 VGSQLPCE 2167
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2156 VGSQLPCE 2163
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 ELPPEG 9
E PPEG
Sbjct: 55 EAPPEG 60
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2156 VGSQLPCE 2163
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2156 VGSQLPCE 2163
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2154 VGSQLPCE 2161
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2161 VGSQLPCE 2168
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2156 VGSQLPCE 2163
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2156 VGSQLPCE 2163
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2156 VGSQLPCE 2163
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2156 VGSQLPCE 2163
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 ELPPEGV 10
+ PP+G+
Sbjct: 451 QFPPQGI 457
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2157 VGSQLPCE 2164
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2156 VGSQLPCE 2163
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2157 VGSQLPCE 2164
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 VGSELPPE 8
+GS+LP E
Sbjct: 2161 IGSQLPCE 2168
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2160 VGSQLPCE 2167
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 VGSELPPE 8
VGS+LP E
Sbjct: 2157 VGSQLPCE 2164
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 5 LPPEGV 10
+PPEGV
Sbjct: 661 VPPEGV 666
47|Sequence|231|240|PPEGVLGALL
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 PPEGVLGAL 9
PPEGVL L
Sbjct: 146 PPEGVLSCL 154
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 PPEGVLGAL 9
PPEGVL L
Sbjct: 146 PPEGVLSCL 154
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 PPEGVLGAL 9
PPEGVL L
Sbjct: 146 PPEGVLSCL 154
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 PPEGVLGAL 9
PPEGVL L
Sbjct: 146 PPEGVLSCL 154
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 PPEGVLGAL 9
PPEGVL L
Sbjct: 146 PPEGVLSCL 154
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 PPEGVLGAL 9
PPEGVL L
Sbjct: 146 PPEGVLSCL 154
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 1 PPEGVLGAL 9
PPEGVL L
Sbjct: 147 PPEGVLSCL 155
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 PPEGVLGAL 9
PPEGVL L
Sbjct: 146 PPEGVLNCL 154
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 PPEGVLGAL 9
PPEGVL L
Sbjct: 146 PPEGVLSCL 154
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 PPEGVLGAL 9
PPEGVL L
Sbjct: 146 PPEGVLNCL 154
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 PPEGVLGAL 9
PPEGVL L
Sbjct: 146 PPEGVLFCL 154
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 PPEGVL 6
PPEGVL
Sbjct: 147 PPEGVL 152
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 PPEGVLGAL 9
P G+LGAL
Sbjct: 2310 PTAGILGAL 2318
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 EGVLGALL 10
+G+LGALL
Sbjct: 752 QGLLGALL 759
Query: 2 PEGVLGAL 9
PEG +GA+
Sbjct: 1624 PEGEIGAV 1631
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 EGVLGALL 10
+G+LGALL
Sbjct: 752 QGLLGALL 759
Query: 2 PEGVLGAL 9
PEG +GA+
Sbjct: 1624 PEGEIGAV 1631
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 EGVLGALL 10
+G+LGALL
Sbjct: 748 QGLLGALL 755
Query: 2 PEGVLGAL 9
PEG +GA+
Sbjct: 1620 PEGEIGAV 1627
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 EGVLGALL 10
+G+LGALL
Sbjct: 749 QGMLGALL 756
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 EGVLGALL 10
+G+LGALL
Sbjct: 750 QGLLGALL 757
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PEGVLGALL 10
PEG++ AL
Sbjct: 1976 PEGIIPALF 1984
Query: 2 PEGVLGAL 9
PEG +GA+
Sbjct: 1593 PEGEVGAI 1600
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PEGVLGALL 10
PEG++ AL
Sbjct: 1977 PEGIIPALF 1985
Query: 2 PEGVLGAL 9
PEG +GA+
Sbjct: 1594 PEGEVGAI 1601
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PEGVLGALL 10
PEG++ AL
Sbjct: 1977 PEGIIPALF 1985
Query: 2 PEGVLGAL 9
PEG +GA+
Sbjct: 1594 PEGEVGAI 1601
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 GVLGALL 10
GVLGALL
Sbjct: 354 GVLGALL 360
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PEGVLGALL 10
PEG++ AL
Sbjct: 1975 PEGIIPALF 1983
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PEGVLGALL 10
PEG++ AL
Sbjct: 1975 PEGIIPALF 1983
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PEGVLGALL 10
PEG++ AL
Sbjct: 1975 PEGIIPALF 1983
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PEGVLGALL 10
PEG++ AL
Sbjct: 1975 PEGIIPALF 1983
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PEGVLGALL 10
PEG++ AL
Sbjct: 1975 PEGIIPALF 1983
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 PPEGVLGAL 9
PP VLG L
Sbjct: 271 PPLDVLGEL 279
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 PPEGVLGAL 9
PP VLG L
Sbjct: 271 PPLDVLGEL 279
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 PPEGVLGAL 9
PP VLG L
Sbjct: 271 PPLDVLGEL 279
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 GVLGALL 10
G+LGALL
Sbjct: 755 GLLGALL 761
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GVLGAL 9
GVLGAL
Sbjct: 153 GVLGAL 158
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GVLGAL 9
GVLGAL
Sbjct: 153 GVLGAL 158
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 PEGVLG 7
PEG+LG
Sbjct: 672 PEGLLG 677
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 PEGVLG 7
PEG+LG
Sbjct: 672 PEGLLG 677
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 2 PEGVLGAL 9
PE + GAL
Sbjct: 535 PEDIAGAL 542
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 GVLGALL 10
GV+GALL
Sbjct: 354 GVIGALL 360
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PPEGVLG 7
P EGV+G
Sbjct: 487 PAEGVVG 493
48|Sequence|236|245|LGALLRVKRL
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 1 LGALLRVKRL 10
LGAL V+RL
Sbjct: 422 LGALQLVRRL 431
49|Sequence|241|250|RVKRLETPAP
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 1 RVKRLETPAP 10
+VK + TPAP
Sbjct: 369 KVKDISTPAP 378
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain
Query: 3 KRLETPAP 10
KRLE P P
Sbjct: 28 KRLEDPLP 35
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 3 KRLETPAP 10
KRLE P P
Sbjct: 28 KRLEDPLP 35
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 KRLETPAP 10
+R+E PAP
Sbjct: 1670 ERMEEPAP 1677
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 5 LETPAP 10
LETP P
Sbjct: 40 LETPLP 45
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 VKRLETPAP 10
+ LETP P
Sbjct: 1154 ISGLETPDP 1162
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 VKRLETPAP 10
++ LETP P
Sbjct: 1164 IEGLETPDP 1172
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 VKRLETPAP 10
++ LETP P
Sbjct: 1164 IEGLETPDP 1172
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 VKRLETPAP 10
++ LETP P
Sbjct: 1164 IEGLETPDP 1172
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 1 RVKRLETP 8
R+K +ETP
Sbjct: 44 RLKLVETP 51
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RVKRLETPAP 10
RV+R ++P P
Sbjct: 465 RVRRGDSPLP 474
50|Sequence|246|260|ETPAPQVPARRLLPP
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 1 ETPAPQVPARRLL 13
ETPAP+ RR L
Sbjct: 235 ETPAPETAKRRRL 247
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TPAPQVPAR 10
TP+P+VP +
Sbjct: 441 TPSPEVPGK 449
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 ETPAPQVPAR 10
+TP+P VP +
Sbjct: 499 DTPSPDVPGK 508
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 ETPAPQVPARRLLPP 15
E P PQ+ L PP
Sbjct: 135 ERPIPQITREVLSPP 149
>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 2 TPAPQVPARRLLP 14
TPA ARR LP
Sbjct: 100 TPATNNRARRELP 112
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 1 ETPAPQVPARRLLP 14
+TPAPQ R P
Sbjct: 263 QTPAPQTTERARQP 276
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TPAPQVPARRLLP 14
T A Q P RRL P
Sbjct: 293 TVALQTPGRRLQP 305
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TPAPQVPARRLLP 14
T A Q P RRL P
Sbjct: 293 TVALQTPGRRLQP 305
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TPAPQVPARRLLP 14
T A Q P RRL P
Sbjct: 293 TVALQTPGRRLQP 305
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TPAPQVPARRLLP 14
T A Q P RRL P
Sbjct: 293 TVALQTPGRRLQP 305
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 ETPAPQVPARRLLPP 15
TP PQ P R L P
Sbjct: 54 NTPDPQKPPRGFLAP 68
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 ETPAPQVPARRLLPP 15
TP PQ P R L P
Sbjct: 54 NTPDPQKPPRGFLAP 68
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 ETPAPQVPARRLLPP 15
TP PQ P R L P
Sbjct: 54 NTPDPQKPPRGFLAP 68
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 TPAPQVPARRLLP 14
TPAP+ R LP
Sbjct: 1772 TPAPRTAFRNKLP 1784
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 ETPAPQVPAR 10
ETP+P +P+
Sbjct: 354 ETPSPAIPSH 363
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 ETPAPQVPAR 10
ETP+P +P+
Sbjct: 354 ETPSPAIPSH 363
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 ETPAPQVPAR 10
ETP+P +P+
Sbjct: 354 ETPSPAIPSH 363
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 2 TPAPQVPAR 10
TPA +PAR
Sbjct: 65 TPAHTIPAR 73
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 TPAPQVPAR 10
TP Q+P R
Sbjct: 363 TPEMQIPGR 371
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 2 TPAPQVPAR 10
TPA +PAR
Sbjct: 65 TPAHAIPAR 73
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 2 TPAPQVPARRL 12
TP P VP+ L
Sbjct: 380 TPVPSVPSTSL 390
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 5 PQVPARRLLP 14
P VP+ LLP
Sbjct: 2268 PSVPSEYLLP 2277
51|Sequence|251|260|QVPARRLLPP
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QVPARRLLP 9
Q P RRL P
Sbjct: 297 QTPGRRLQP 305
Query: 4 ARRLLP 9
ARRLLP
Sbjct: 514 ARRLLP 519
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QVPARRLLP 9
Q P RRL P
Sbjct: 297 QTPGRRLQP 305
Query: 4 ARRLLP 9
ARRLLP
Sbjct: 514 ARRLLP 519
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QVPARRLLP 9
Q P RRL P
Sbjct: 297 QTPGRRLQP 305
Query: 4 ARRLLP 9
ARRLLP
Sbjct: 513 ARRLLP 518
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QVPARRLLP 9
Q P RRL P
Sbjct: 297 QTPGRRLQP 305
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VPARRLLPP 10
PAR +LPP
Sbjct: 75 APARPMLPP 83
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VPARRLLPP 10
PAR +LPP
Sbjct: 75 APARPMLPP 83
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 2 VPARRLLPP 10
VP + LPP
Sbjct: 7 VPGKVYLPP 15
>sp|VE7_HPV45|PROTEIN E7|Human papillomavirus 45
Query: 1 QVPARRLLP 9
Q+PARR P
Sbjct: 49 QLPARRAEP 57