PAWR_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|SSTRYGGTAM

>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 4 RYGGTAM 10
RYG TAM
Sbjct: 706 RYGKTAM 712


>sp|TRM56_METLZ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocorpusculum

Query: 2 STRYGGT 8
+TR+GGT
Sbjct: 55 ATRFGGT 61


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 2 STRYGGTAM 10
+T YGG A+
Sbjct: 204 NTNYGGNAL 212


>sp|TRM1_HALMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloarcula marismortui

Query: 1 SSTRYGGT 8
S T YGGT
Sbjct: 343 SRTHYGGT 350


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 STRYGGTAM 10
+T YGG A+
Sbjct: 204 NTNYGGNAL 212


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 2 STRYGGTA 9
+T+YGG A
Sbjct: 264 NTKYGGKA 271


>sp|RL1_METB6|LARGE ribosomal subunit protein uL1|Methanoregula boonei (strain DSM

Query: 2 STRYGGTAM 10
ST+ G TAM
Sbjct: 163 STKVGSTAM 171




2|SequenceR|15|6|SGGLGSSTRY

>sp|FLUC_PYRHO|FLUORIDE-SPECIFIC ion channel FluC|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GGLGSSTRY 10
GGLG+ TRY
Sbjct: 13 GGLGALTRY 21


>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 2|Methanocaldococcus

Query: 1 SGGLGSST 8
SGGL SST
Sbjct: 280 SGGLDSST 287


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 GGLGSSTRY 10
GGLG+ RY
Sbjct: 404 GGLGAILRY 412


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 2 GGLGSSTRY 10
GGLG+ RY
Sbjct: 404 GGLGAFLRY 412


>sp|QUEC_THEVO|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SGGLGSST 8
SGGL SST
Sbjct: 10 SGGLDSST 17


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 SGGLGSSTR 9
+GG+G++TR
Sbjct: 256 AGGVGANTR 264


>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 2 GGLGSSTR 9
GGL +STR
Sbjct: 504 GGLSASTR 511


>sp|PELO_HALSA|PROTEIN pelota homolog|Halobacterium salinarum (strain ATCC 700922

Query: 2 GGLGSSTRY 10
GG+G+ RY
Sbjct: 346 GGIGAVLRY 354


>sp|PELO_HALS3|PROTEIN pelota homolog|Halobacterium salinarum (strain ATCC 29341

Query: 2 GGLGSSTRY 10
GG+G+ RY
Sbjct: 346 GGIGAVLRY 354


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 SGGLGSSTR 9
+GG+G++TR
Sbjct: 256 AGGVGANTR 264


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 2 GGLGSSTRY 10
GG+G+ RY
Sbjct: 397 GGIGAILRY 405


>sp|KAE1B_METBF|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 SGGLGSSTR 9
+GG+G++TR
Sbjct: 256 AGGVGANTR 264


>sp|QUEC_METHJ|7-CYANO-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SGGLGSST 8
SGG+ SST
Sbjct: 8 SGGMDSST 15


>sp|QUEC_METPE|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 SGGLGSST 8
SGG+ SST
Sbjct: 8 SGGMDSST 15


>sp|QUEC_ARCFU|7-CYANO-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SGGLGSST 8
SGG+ SST
Sbjct: 8 SGGIDSST 15


>sp|QUEC_THEAC|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SGGLGSST 8
SGGL SST
Sbjct: 11 SGGLDSST 18




3|SequenceR|20|11|LFDTTSGGLG

>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 1 LFDTTSGGL 9
LF+T GGL
Sbjct: 207 LFNTGEGGL 215


>sp|G3P_THESM|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus sibiricus (strain DSM 12597

Query: 1 LFDTTSGGLG 10
+ D T GG+G
Sbjct: 83 IVDATPGGMG 92


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 LFDTTSGGLG 10
+ D T GG+G
Sbjct: 83 IVDATPGGMG 92


>sp|G3P_THEKO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LFDTTSGGLG 10
+ D T GG+G
Sbjct: 83 IVDATPGGMG 92


>sp|G3P_PYRWO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus woesei

Query: 1 LFDTTSGGLG 10
+ D T GG+G
Sbjct: 83 IVDATPGGMG 92


>sp|G3P_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LFDTTSGGLG 10
+ D T GG+G
Sbjct: 83 IVDATPGGMG 92


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LFDTTSGGLG 10
+ DT +GG+G
Sbjct: 87 IIDTFTGGIG 96


>sp|G3P_PYRHO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LFDTTSGGLG 10
+ D T GG+G
Sbjct: 83 IVDATPGGIG 92


>sp|G3P_SULAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LFDTTSGGLG 10
+ D T GG+G
Sbjct: 83 IIDATPGGVG 92


>sp|G3P_PYRAB|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 LFDTTSGGLG 10
+ D T GG+G
Sbjct: 83 IVDATPGGVG 92




4|SequenceR|25|16|AKWEELFDTT

>sp|ARCD_HALSA|ARGININE/ORNITHINE antiporter ArcD|Halobacterium salinarum (strain ATCC 700922

Query: 3 WEELFD 8
W+ELFD
Sbjct: 68 WDELFD 73


>sp|ARCD_HALS3|ARGININE/ORNITHINE antiporter ArcD|Halobacterium salinarum (strain ATCC 29341

Query: 3 WEELFD 8
W+ELFD
Sbjct: 68 WDELFD 73


>sp|NADK_THEVO|NAD kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 WEELFDT 9
WE+++DT
Sbjct: 29 WEKIYDT 35


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 AKWEELFD 8
AK EE+FD
Sbjct: 759 AKIEEIFD 766


>sp|TRPF_ARCFU|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AKWEELFDTT 10
A+WEE+ T
Sbjct: 62 AEWEEILAKT 71


>sp|MRE11_HALSA|DNA double-strand break repair protein|Halobacterium salinarum (strain

Query: 1 AKWEELFDT 9
A+W +LF+T
Sbjct: 92 AQWLDLFET 100


>sp|RL11_METKA|LARGE ribosomal subunit protein uL11|Methanopyrus kandleri (strain AV19 /

Query: 1 AKWEELFD 8
KW++LF+
Sbjct: 152 GKWDDLFE 159


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WEELFDTT 10
WE L DTT
Sbjct: 521 WEYLCDTT 528




5|SequenceR|30|21|MKERKAKWEE

>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 MKERKAKWE 9
+KERKAKW+
Sbjct: 515 LKERKAKWK 523


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ERKAKWEE 10
ERK +WEE
Sbjct: 173 ERKKRWEE 180


>sp|COOS2_METAC|CARBON monoxide dehydrogenase 2|Methanosarcina acetivorans (strain ATCC

Query: 3 ERKAKWEE 10
ERK +WEE
Sbjct: 173 ERKKRWEE 180


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MKERKAKWEE 10
+KER AKW++
Sbjct: 515 IKERLAKWKK 524


>sp|YPZ8_METTF|UNCHARACTERIZED protein ORF8'|Methanothermobacter thermautotrophicus

Query: 2 KERKAKW 8
+ER+A+W
Sbjct: 127 RERRAQW 133


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ERKAKWE 9
+RKAKWE
Sbjct: 117 DRKAKWE 123


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 MKERKAKWEE 10
+KER A W++
Sbjct: 514 IKERLANWKK 523


>sp|CDPAS_METLZ|CDP-ARCHAEOL synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KERKAKW 8
K+R AKW
Sbjct: 99 KDRGAKW 105


>sp|AROC_HALLT|CHORISMATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 KERKAKWE 9
K+R A WE
Sbjct: 321 KQRSADWE 328


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MKERKAKW 8
+ ER+AKW
Sbjct: 512 LAERRAKW 519


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 4 RKAKWEE 10
RKA+W+E
Sbjct: 130 RKARWDE 136


>sp|Y230_METJA|UNCHARACTERIZED protein MJ0230|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MKERKAKWEE 10
+KE K KWEE
Sbjct: 76 VKELKKKWEE 85


>sp|DNLI_THEON|DNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 MKERKAKWEE 10
+ER+AK EE
Sbjct: 357 FRERRAKLEE 366


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 MKERKAKWE 9
M++RK WE
Sbjct: 670 MEDRKVTWE 678


>sp|AROK_METMA|SHIKIMATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MKERKAKWE 9
+KE K+ WE
Sbjct: 258 VKELKSAWE 266


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MKERKAKWE 9
M++RK WE
Sbjct: 670 MEDRKVTWE 678




6|SequenceR|35|26|NQKARMKERK

>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 NQKARMKE 8
NQK R+KE
Sbjct: 224 NQKYRLKE 231


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 1 NQKARMKERK 10
N K RMKE K
Sbjct: 71 NSKDRMKELK 80




7|SequenceR|40|31|APGPPNQKAR

>sp|LIVF_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 4 PPNQKAR 10
PP+QKAR
Sbjct: 69 PPHQKAR 75


>sp|RRP42_THEGJ|EXOSOME complex component Rrp42|Thermococcus gammatolerans (strain DSM

Query: 2 PGPPNQKA 9
PGPP+++A
Sbjct: 96 PGPPDERA 103


>sp|RRP42_THEON|EXOSOME complex component Rrp42|Thermococcus onnurineus (strain NA1)

Query: 2 PGPPNQKA 9
PGPP+++A
Sbjct: 96 PGPPDERA 103


>sp|RRP42_PYRFU|EXOSOME complex component Rrp42|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PGPPNQKA 9
PGPP+++A
Sbjct: 96 PGPPDERA 103


>sp|RRP42_PYRHO|EXOSOME complex component Rrp42|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PGPPNQKA 9
PGPP+++A
Sbjct: 96 PGPPDERA 103


>sp|RRP42_PYRAB|EXOSOME complex component Rrp42|Pyrococcus abyssi (strain GE5 /

Query: 2 PGPPNQKA 9
PGPP+++A
Sbjct: 96 PGPPDERA 103


>sp|RRP42_METKA|EXOSOME complex component Rrp42|Methanopyrus kandleri (strain AV19 /

Query: 2 PGPPNQKA 9
PGPP++ A
Sbjct: 95 PGPPDENA 102


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 2 PGPPNQKA 9
P PPN+KA
Sbjct: 52 PMPPNKKA 59


>sp|RRP42_SACS2|EXOSOME complex component Rrp42|Saccharolobus solfataricus (strain ATCC

Query: 2 PGPPNQKA 9
PGPP++ A
Sbjct: 100 PGPPDENA 107


>sp|RRP42_SACI7|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 PGPPNQKA 9
PGPP++ A
Sbjct: 100 PGPPDENA 107


>sp|RRP42_SACI6|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PGPPNQKA 9
PGPP++ A
Sbjct: 100 PGPPDENA 107


>sp|RRP42_SACI4|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PGPPNQKA 9
PGPP++ A
Sbjct: 100 PGPPDENA 107


>sp|RRP42_SACI3|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.27)

Query: 2 PGPPNQKA 9
PGPP++ A
Sbjct: 100 PGPPDENA 107


>sp|RRP42_SACI2|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PGPPNQKA 9
PGPP++ A
Sbjct: 100 PGPPDENA 107


>sp|RRP42_SACI1|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 PGPPNQKA 9
PGPP++ A
Sbjct: 100 PGPPDENA 107


>sp|RRP42_METAC|EXOSOME complex component Rrp42|Methanosarcina acetivorans (strain ATCC

Query: 2 PGPPNQKA 9
PGPP ++A
Sbjct: 97 PGPPREEA 104


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 2 PGPPNQKA 9
P PPN+KA
Sbjct: 52 PMPPNKKA 59


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 2 PGPPNQKA 9
P PPN+KA
Sbjct: 52 PMPPNKKA 59


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 2 PGPPNQKA 9
P PPN+KA
Sbjct: 52 PMPPNKKA 59


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 2 PGPPNQKA 9
P PPN+KA
Sbjct: 52 PMPPNKKA 59


>sp|RRP42_SULTO|EXOSOME complex component Rrp42|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PGPPNQKA 9
PGPP++ A
Sbjct: 100 PGPPDENA 107


>sp|RRP42_THEKO|EXOSOME complex component Rrp42|Thermococcus kodakarensis (strain ATCC

Query: 2 PGPPNQKA 9
PGPP++ A
Sbjct: 96 PGPPDENA 103


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 2 PGPPNQKA 9
P PPN+KA
Sbjct: 52 PMPPNKKA 59


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 APGPPNQKAR 10
AP PP+ +AR
Sbjct: 274 APEPPHHRAR 283


>sp|RRP42_AERPE|EXOSOME complex component Rrp42|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGPPNQKA 9
PGPP++ A
Sbjct: 100 PGPPDENA 107


>sp|RRP42_METTH|EXOSOME complex component Rrp42|Methanothermobacter thermautotrophicus

Query: 2 PGPPNQKA 9
PGPP++++
Sbjct: 97 PGPPDERS 104


>sp|CMR4_PYRFU|CRISPR system Cmr endoribonuclease Cmr4|Pyrococcus furiosus (strain ATCC

Query: 3 GPPNQKA 9
GPP +KA
Sbjct: 69 GPPTEKA 75


>sp|RRP42_METMA|EXOSOME complex component Rrp42|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PGPPNQKA 9
PGPP + A
Sbjct: 97 PGPPREDA 104


>sp|RRP42_ARCFU|EXOSOME complex component Rrp42|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGPPNQKA 9
PGPP++ +
Sbjct: 95 PGPPDENS 102


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 2 PGPPNQKA 9
P PPN A
Sbjct: 670 PSPPNSSA 677


>sp|RS4E_ARCFU|SMALL ribosomal subunit protein eS4|Archaeoglobus fulgidus (strain ATCC

Query: 1 APGPPNQKA 9
+PGP N++A
Sbjct: 29 SPGPHNKEA 37


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 1 APGPPNQ 7
+PGPP +
Sbjct: 11 SPGPPTE 17


>sp|HMDX_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 2 PGPPNQK 8
PG P+QK
Sbjct: 149 PGTPSQK 155


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 2 PGPPNQKA 9
P PPNQ A
Sbjct: 46 PYPPNQAA 53


>sp|LEUC_PYRAE|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum aerophilum (strain ATCC

Query: 4 PPNQKA 9
PPNQ+A
Sbjct: 68 PPNQRA 73


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM

Query: 4 PPNQKA 9
PPNQ+A
Sbjct: 68 PPNQRA 73




8|SequenceR|45|36|GGGPPAPGPP

>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GPPAPGPP 10
GPP P P
Sbjct: 43 GPPYPSSP 50


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GPPAPGPP 10
GPP P P
Sbjct: 43 GPPYPSSP 50


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GPPAPGPP 10
GPP P P
Sbjct: 46 GPPYPSSP 53


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 GPPAPGPP 10
GPP P P
Sbjct: 46 GPPYPSSP 53


>sp|RL29_PICTO|LARGE ribosomal subunit protein uL29|Picrophilus torridus (strain ATCC

Query: 1 GGGPPAPG 8
GG P +PG
Sbjct: 37 GGAPSSPG 44


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 5 PAPGP 9
PAPGP
Sbjct: 680 PAPGP 684


>sp|Y1565_METJA|PROBABLE helicase MJ1565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PPAPGPP 10
PP PG P
Sbjct: 104 PPKPGIP 110


>sp|RL29_THEVO|LARGE ribosomal subunit protein uL29|Thermoplasma volcanium (strain

Query: 1 GGGPPAPG 8
GG P+PG
Sbjct: 38 GGSSPSPG 45


>sp|RL29_THEAC|LARGE ribosomal subunit protein uL29|Thermoplasma acidophilum (strain

Query: 1 GGGPPAPG 8
GG P+PG
Sbjct: 40 GGSSPSPG 47


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GGGPPAPGPP 10
GG P PG P
Sbjct: 405 GGAVPPPGKP 414


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGGPPAPGPP 10
GG PP PP
Sbjct: 213 GGRPPLGTPP 222


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 1 GGGPPAPG 8
GGG APG
Sbjct: 213 GGGENAPG 220


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 GGGPPAPG 8
GGG APG
Sbjct: 213 GGGENAPG 220


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PPAPGPP 10
PP PG P
Sbjct: 15 PPLPGSP 21


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 1 GGGPPAPG 8
GGG APG
Sbjct: 213 GGGENAPG 220


>sp|HEM3_CALMQ|PROBABLE porphobilinogen deaminase|Caldivirga maquilingensis (strain ATCC

Query: 4 PPAPG 8
PPAPG
Sbjct: 189 PPAPG 193


>sp|RL11_METTH|LARGE ribosomal subunit protein uL11|Methanothermobacter

Query: 2 GGPPAPGPP 10
GG PGPP
Sbjct: 12 GGKATPGPP 20


>sp|AROB_PYRIL|3-DEHYDROQUINATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PPAPGPP 10
PP PG P
Sbjct: 40 PPIPGAP 46


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GGGPPAPGPP 10
GG P PG P
Sbjct: 401 GGAVPPPGTP 410


>sp|RL29_METTP|LARGE ribosomal subunit protein uL29|Methanothrix thermoacetophila

Query: 1 GGGPPAPG 8
GG P PG
Sbjct: 38 GGAPEKPG 45


>sp|AROB_PYRNV|3-DEHYDROQUINATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PPAPGPP 10
PP PG P
Sbjct: 40 PPIPGAP 46


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PPAPGPP 10
PP PG P
Sbjct: 519 PPTPGTP 525


Query: 1 GGGPPAPGPP 10
GG P PG P
Sbjct: 403 GGVVPPPGAP 412


>sp|IPYR_PICTO|INORGANIC pyrophosphatase|Picrophilus torridus (strain ATCC 700027

Query: 4 PPAPGPP 10
PP P PP
Sbjct: 12 PPGPNPP 18


>sp|GGR_METJA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGPPAPGP 9
GG P GP
Sbjct: 258 GGAPVSGP 265


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GGPPAPGPP 10
G PPAP P
Sbjct: 373 GKPPAPINP 381


>sp|RL11_DESA1|LARGE ribosomal subunit protein uL11|Desulfurococcus amylolyticus

Query: 2 GGPPAPGPP 10
GG PGPP
Sbjct: 12 GGKATPGPP 20


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 GGGPPAPGPP 10
G G P PG P
Sbjct: 171 GAGLPHPGGP 180


>sp|RL11_METST|LARGE ribosomal subunit protein uL11|Methanosphaera stadtmanae (strain

Query: 2 GGPPAPGPP 10
GG PGPP
Sbjct: 12 GGKATPGPP 20


>sp|RL11_SULAC|LARGE ribosomal subunit protein uL11|Sulfolobus acidocaldarius (strain

Query: 2 GGPPAPGPP 10
GG PGPP
Sbjct: 12 GGSAKPGPP 20


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 3 GPPAPGP 9
GPP P P
Sbjct: 323 GPPRPDP 329


>sp|RL11_PYRHO|LARGE ribosomal subunit protein uL11|Pyrococcus horikoshii (strain ATCC

Query: 2 GGPPAPGPP 10
GG PGPP
Sbjct: 12 GGKATPGPP 20


>sp|RL11_PYRAB|LARGE ribosomal subunit protein uL11|Pyrococcus abyssi (strain GE5 /

Query: 2 GGPPAPGPP 10
GG PGPP
Sbjct: 12 GGKATPGPP 20


>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GGPPAPGPP 10
G P +PG P
Sbjct: 157 GSPSSPGIP 165


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GGGPPAPGPP 10
GG P PG P
Sbjct: 405 GGVVPPPGTP 414


>sp|NADE_HYPBU|NH(3)-DEPENDENT NAD(+) synthetase|Hyperthermus butylicus (strain DSM 5456

Query: 4 PPAPGP 9
PPAP P
Sbjct: 259 PPAPDP 264


>sp|RL11_ARCFU|LARGE ribosomal subunit protein uL11|Archaeoglobus fulgidus (strain

Query: 2 GGPPAPGPP 10
GG +PGPP
Sbjct: 11 GGQASPGPP 19


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 2 GGPPAPGPP 10
GG P PG P
Sbjct: 483 GGQPHPGLP 491




9|SequenceR|50|41|AADSSGGGPP

***** No hits found ******


10|SequenceR|55|46|APPKGAADSS

>sp|SRP54_META3|SIGNAL recognition particle 54 kDa|Methanococcus aeolicus (strain ATCC

Query: 3 PKGAAD 8
PKGAAD
Sbjct: 359 PKGAAD 364


>sp|ALF_HALVD|FRUCTOSE-BISPHOSPHATE aldolase class 2|Haloferax volcanii (strain ATCC 29605

Query: 2 PPKGAADS 9
PP+G AD+
Sbjct: 273 PPEGVADA 280


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 2 PPKGAADSS 10
PP GAA+S+
Sbjct: 546 PPDGAAEST 554


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 3 PKGAADS 9
P+GAAD+
Sbjct: 201 PRGAADA 207




11|SequenceR|60|51|TGLAGAPPKG

>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 1 TGLAGAPPKG 10
TG++G+P KG
Sbjct: 4 TGISGSPRKG 13


>sp|DHYS_PYRHO|PROBABLE deoxyhypusine synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LAGAPPK 9
L+GAPP+
Sbjct: 294 LSGAPPR 300


>sp|DHYS_METVS|PROBABLE deoxyhypusine synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 LAGAPPK 9
L+GAPP+
Sbjct: 295 LSGAPPE 301


>sp|DHYS_METJA|PROBABLE deoxyhypusine synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LAGAPPK 9
L+GAPP+
Sbjct: 290 LSGAPPE 296


>sp|DHYS_HALSA|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LAGAPPK 9
L+GAPP+
Sbjct: 285 LSGAPPE 291


>sp|DHYS_HALS3|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 LAGAPPK 9
L+GAPP+
Sbjct: 285 LSGAPPE 291


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 5 GAPPKG 10
GAPP+G
Sbjct: 801 GAPPEG 806


>sp|G3P_HALVA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 3 LAGAPPKG 10
L APPKG
Sbjct: 122 LISAPPKG 129


>sp|GLCD1_VULM7|GLUCOSE 1-dehydrogenase 1|Vulcanisaeta moutnovskia (strain 768-28)

Query: 2 GLAGAPPKG 10
G GAPP G
Sbjct: 48 GRYGAPPPG 56


>sp|MPGS_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GLAGAPPK 9
GLA PPK
Sbjct: 351 GLAEEPPK 358




12|SequenceR|65|56|AAAAPTGLAG

>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AAAAPTGLA 9
AA APTG+
Sbjct: 75 AATAPTGVG 83




13|SequenceR|70|61|NLENAAAAAP

>sp|Y1472_THEKO|PROTEIN TK1472|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LENAAAAAP 10
LEN AAP
Sbjct: 135 LENTGGAAP 143


>sp|ASSY_METST|ARGININOSUCCINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LENAAAAAP 10
LEN A AAP
Sbjct: 185 LENPATAAP 193




14|SequenceR|75|66|GPLNNNLENA

>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 GPLNNNLENA 10
G L N+LENA
Sbjct: 310 GKLKNDLENA 319


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 1 GPLNNNLEN 9
GPL NN+E+
Sbjct: 205 GPLANNVED 213


>sp|Y1637_METJA|UNCHARACTERIZED protein MJ1637|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LNNNLEN 9
LNNNL+N
Sbjct: 218 LNNNLDN 224


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 GPLNNNLEN 9
GPL NN+E+
Sbjct: 205 GPLANNVED 213


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 1 GPLNNNLEN 9
GPLNN + +
Sbjct: 62 GPLNNTIHD 70


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 1 GPLNNNLEN 9
GPLNN + +
Sbjct: 65 GPLNNTIHD 73


>sp|MPTE_METJA|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LNNNLENA 10
LNN LENA
Sbjct: 31 LNNILENA 38




15|SequenceR|80|71|AAPAGGPLNN

>sp|GVPC_HALMT|GAS vesicle protein C|Haloferax mediterranei (strain ATCC 33500

Query: 1 AAPAGGPLNN 10
AAP PLNN
Sbjct: 247 AAPMATPLNN 256


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 5 GGPLNN 10
GGPLNN
Sbjct: 64 GGPLNN 69


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 5 GGPLNN 10
GGPLNN
Sbjct: 61 GGPLNN 66


>sp|GGR_META3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AAPAGGPL 8
AP GGP+
Sbjct: 259 GAPVGGPI 266


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 3 PAGGPLNN 10
P+GG LNN
Sbjct: 264 PSGGSLNN 271


>sp|SYFB_AERPE|PHENYLALANINE--TRNA ligase beta subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 AAPAGGPLN 9
A+PAGG +N
Sbjct: 307 ASPAGGLVN 315


>sp|GGR1_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 AAPAGGPL 8
A PA GP+
Sbjct: 259 AVPASGPI 266




16|SequenceR|85|76|GPVAPAAPAG

>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus fulgidus

Query: 2 PVAPAAPAG 10
P A AAPAG
Sbjct: 488 PAASAAPAG 496


>sp|DTDA_METMJ|D-AMINOACYL-TRNA deacylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GPVAPAAPA 9
G +APAAPA
Sbjct: 96 GRLAPAAPA 104


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GPVAPAAPAG 10
GP+ P A AG
Sbjct: 40 GPMGPTAMAG 49


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GPVAPAAPAG 10
GP+ P A AG
Sbjct: 40 GPMGPTAMAG 49


>sp|APGM_PYRCJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PVAPAAPAG 10
PVA AAP G
Sbjct: 174 PVAKAAPLG 182




17|SequenceR|90|81|NVGGPGPVAP

>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VGGPGP 7
VGGPGP
Sbjct: 224 VGGPGP 229


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 VGGPGP 7
VGGPGP
Sbjct: 221 VGGPGP 226


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 VGGPGP 7
VGGPGP
Sbjct: 218 VGGPGP 223


>sp|MTD_METKA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanopyrus

Query: 3 GGPGPVAP 10
GGP P AP
Sbjct: 71 GGPNPAAP 78


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 2 VGGPGP 7
+GGPGP
Sbjct: 221 IGGPGP 226


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 2 VGGPGP 7
+GGPGP
Sbjct: 221 IGGPGP 226


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 VGGPGP 7
+GGPGP
Sbjct: 221 IGGPGP 226


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 VGGPGP 7
+GGPGP
Sbjct: 224 IGGPGP 229


>sp|DTDA_HYPBU|D-AMINOACYL-TRNA deacylase|Hyperthermus butylicus (strain DSM 5456

Query: 1 NVGGPGPVAP 10
+ G PGP AP
Sbjct: 87 HTGNPGPEAP 96


>sp|ARLY_METMJ|ARGININOSUCCINATE lyase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VGGPGPVA 9
VGGP P A
Sbjct: 443 VGGPAPEA 450


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NVGGPGP 7
N GGP P
Sbjct: 190 NYGGPAP 196


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VGGPGPVAP 10
+GG P+AP
Sbjct: 273 IGGLTPIAP 281


>sp|RF1_HALWD|PEPTIDE chain release factor subunit|Haloquadratum walsbyi (strain DSM

Query: 2 VGGPGP 7
VGGP P
Sbjct: 227 VGGPSP 232


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC 29605

Query: 2 VGGPGP 7
VGGP P
Sbjct: 227 VGGPSP 232


>sp|RF1_HALSA|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 2 VGGPGP 7
VGGP P
Sbjct: 227 VGGPSP 232


>sp|RF1_HALS3|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 2 VGGPGP 7
VGGP P
Sbjct: 227 VGGPSP 232


>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 2 VGGPGP 7
VGGP P
Sbjct: 227 VGGPSP 232


>sp|RF1_HALLT|PEPTIDE chain release factor subunit|Halorubrum lacusprofundi (strain ATCC

Query: 2 VGGPGP 7
VGGP P
Sbjct: 227 VGGPSP 232


>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 2 VGGPGP 7
V GPGP
Sbjct: 226 VAGPGP 231


>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NVGGPGPVAP 10
N GG G V+P
Sbjct: 264 NTGGMGAVSP 273


>sp|ACDD_METKA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanopyrus kandleri

Query: 1 NVGGPGPV 8
+VG PGP+
Sbjct: 134 DVGIPGPI 141


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 1 NVGGPGPVA 9
N PGP A
Sbjct: 70 NAAAPGPTA 78




18|SequenceR|95|86|SGVACNVGGP

>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 4 ACNVGG 9
ACN+GG
Sbjct: 379 ACNIGG 384


>sp|THIOL_METTL|ACETYL-COA acetyltransferase|Methanothermococcus thermolithotrophicus

Query: 2 GVACNVGG 9
G+A NVGG
Sbjct: 371 GIAANVGG 378


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GVACNVGGP 10
GV C V GP
Sbjct: 258 GVQCMVEGP 266


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GVACNVGGP 10
GV C V GP
Sbjct: 255 GVQCMVEGP 263


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 SGVACNVGGP 10
SG AC+ G P
Sbjct: 1064 SGSACHSGSP 1073


>sp|Y584_THEVO|PROTEIN TV0584|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GVACNVGG 9
G+ C+VGG
Sbjct: 135 GLLCSVGG 142


>sp|COME_METMP|SULFOPYRUVATE decarboxylase subunit beta|Methanococcus maripaludis (strain DSM

Query: 3 VACNVGGP 10
V CN+G P
Sbjct: 21 VVCNIGIP 28


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 SGVACNVGGP 10
S VAC+ GP
Sbjct: 282 SMVACDPNGP 291


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 1 SGVACNVGGP 10
S VAC+ GP
Sbjct: 282 SMVACDPNGP 291


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 1 SGVACNVGGP 10
S VAC+ GP
Sbjct: 282 SMVACDPNGP 291


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 1 SGVACNVGGP 10
S V CN GP
Sbjct: 282 SMVECNPNGP 291


>sp|DACZ_HALVD|DIADENYLATE cyclase|Haloferax volcanii (strain ATCC 29605

Query: 3 VACNVG 8
+ACNVG
Sbjct: 85 IACNVG 90


>sp|GLYA_METAR|SERINE hydroxymethyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 SGVACNVGG 9
SGV CN+
Sbjct: 91 SGVNCNIAA 99




19|SequenceR|100|91|RTLMASGVAC

>sp|SFSA_THEAC|SUGAR fermentation stimulation protein homolog|Thermoplasma acidophilum

Query: 2 TLMASGVA 9
TLMA+G+A
Sbjct: 118 TLMANGIA 125


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 5 ASGVAC 10
ASGVAC
Sbjct: 428 ASGVAC 433


>sp|LEUD1_METKA|3-ISOPROPYLMALATE dehydratase small subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 3 LMASGVAC 10
L A+G+AC
Sbjct: 76 LKAAGIAC 83


>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 3 LMASGVAC 10
L A+GVAC
Sbjct: 84 LSAAGVAC 91




20|SequenceR|105|96|PGPAARTLMA

>sp|RUVB_METHJ|HOLLIDAY junction branch migration complex|Methanospirillum hungatei JF-1

Query: 2 GPAARTL 8
GP+ART+
Sbjct: 139 GPSARTI 145




21|SequenceR|110|101|DESRRPGPAA

>sp|RRP41_THEVO|EXOSOME complex component Rrp41|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DESRRPGP 8
DE +RPGP
Sbjct: 88 DERKRPGP 95


>sp|RRP41_THEAC|EXOSOME complex component Rrp41|Thermoplasma acidophilum (strain ATCC

Query: 1 DESRRPGP 8
DE +RPGP
Sbjct: 88 DERKRPGP 95


>sp|RL34_HYPBU|LARGE ribosomal subunit protein eL34|Hyperthermus butylicus (strain DSM

Query: 2 ESRRPGPA 9
E RRPGPA
Sbjct: 28 EKRRPGPA 35


>sp|RRP41_METKA|EXOSOME complex component Rrp41|Methanopyrus kandleri (strain AV19 /

Query: 1 DESRRPGP 8
DE +RPGP
Sbjct: 85 DERKRPGP 92


>sp|RL34_AERPE|LARGE ribosomal subunit protein eL34|Aeropyrum pernix (strain ATCC

Query: 2 ESRRPGPA 9
E R+PGPA
Sbjct: 28 ERRKPGPA 35


>sp|RRP41_ARCFU|EXOSOME complex component Rrp41|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DESRRPGP 8
+E +RPGP
Sbjct: 87 EERKRPGP 94


>sp|Y2580_AERPE|UNCHARACTERIZED protein APE_2580|Aeropyrum pernix (strain ATCC 700893

Query: 3 SRRPGPA 9
+RRPGP
Sbjct: 168 TRRPGPV 174


>sp|RRP41_METTH|EXOSOME complex component Rrp41|Methanothermobacter thermautotrophicus

Query: 1 DESRRPGP 8
+E +RPGP
Sbjct: 87 EERKRPGP 94


>sp|RL34_STAMF|LARGE ribosomal subunit protein eL34|Staphylothermus marinus (strain

Query: 2 ESRRPGPA 9
E R+PGPA
Sbjct: 28 EPRKPGPA 35


>sp|RL10_METMP|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain

Query: 1 DESRRPGP 8
DES+ P P
Sbjct: 109 DESKSPAP 116


>sp|RL10_METM6|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C6

Query: 1 DESRRPGP 8
DES+ P P
Sbjct: 109 DESKSPAP 116


>sp|RL10_METM7|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C7

Query: 1 DESRRPGP 8
DES+ P P
Sbjct: 109 DESKSPAP 116


>sp|RS11_META3|SMALL ribosomal subunit protein uS11|Methanococcus aeolicus (strain

Query: 2 ESRRPGPAA 10
+S+ PGP A
Sbjct: 81 KSKNPGPGA 89




22|SequenceR|115|106|AAPPEDESRR

>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPEDE 7
PPEDE
Sbjct: 509 PPEDE 513


>sp|PUS10_ACIS3|TRNA pseudouridine synthase Pus10|Acidilobus saccharovorans (strain DSM

Query: 1 AAPPEDESRR 10
A+ PED SRR
Sbjct: 288 ASGPEDLSRR 297


>sp|DHOM_PYRHO|HOMOSERINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PPEDESR 9
PPE+E R
Sbjct: 227 PPEEEER 233


>sp|NAC_HALSA|NASCENT polypeptide-associated complex protein|Halobacterium salinarum

Query: 1 AAPPEDESR 9
A+ PEDE+R
Sbjct: 103 ASVPEDEAR 111


>sp|Y657_ARCFU|UNCHARACTERIZED protein AF_0657|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AAPPEDE 7
AAP EDE
Sbjct: 20 AAPAEDE 26


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AAPPEDESRR 10
A+PP SRR
Sbjct: 220 ASPPATSSRR 229




23|SequenceR|120|111|AASASAAPPE

***** No hits found ******


24|SequenceR|125|116|RQPPPAASAS

>sp|PRIS_HALMA|DNA primase small subunit PriS|Haloarcula marismortui (strain ATCC

Query: 3 PPPAAS 8
PPPAA+
Sbjct: 24 PPPAAN 29




25|SequenceR|130|121|PEEEDRQPPP

>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 4 EDRQPPP 10
E+R PPP
Sbjct: 900 EERNPPP 906


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 EEEDRQPP 9
+ EDR+PP
Sbjct: 286 KREDRKPP 293


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 EEEDRQPP 9
+E DR+PP
Sbjct: 287 KEADRRPP 294


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 2 EEEDRQPP 9
+E DR+PP
Sbjct: 287 KEADRRPP 294


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 EEEDRQPP 9
+E DR+PP
Sbjct: 287 KEADRRPP 294


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 EEEDRQPP 9
+E DR+PP
Sbjct: 287 KEADRRPP 294




26|SequenceR|135|126|EPVGDPEEED

>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PVGDPEEE 9
P+GDPEE+
Sbjct: 414 PIGDPEED 421


>sp|SRP54_THEKO|SIGNAL recognition particle 54 kDa|Thermococcus kodakarensis (strain ATCC

Query: 1 EPVGDPEEED 10
E GDPEE+D
Sbjct: 157 EVFGDPEEKD 166


>sp|SRP54_THEON|SIGNAL recognition particle 54 kDa|Thermococcus onnurineus (strain NA1)

Query: 1 EPVGDPEEED 10
E GDPEE+D
Sbjct: 157 EVFGDPEEKD 166


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 EPVGDPE 7
EP GDPE
Sbjct: 96 EPKGDPE 102


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 PVGDPEEED 10
P G PE++D
Sbjct: 7343 PTGSPEQKD 7351


>sp|GUAA_AERPE|GMP synthase [glutamine-hydrolyzing]|Aeropyrum pernix (strain ATCC

Query: 1 EPVGDPEEE 9
E VGDPEE+
Sbjct: 289 EGVGDPEEK 297


>sp|RNP2_METPE|RIBONUCLEASE P protein component 2|Methanosphaerula palustris (strain ATCC

Query: 1 EPVGDPEEED 10
+PV PE ED
Sbjct: 110 QPVERPERED 119


>sp|SRP54_METLZ|SIGNAL recognition particle 54 kDa|Methanocorpusculum labreanum (strain

Query: 4 GDPEEED 10
GDP+E+D
Sbjct: 157 GDPKEKD 163


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 4 GDPEEED 10
GDPE ED
Sbjct: 795 GDPESED 801


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PVGDPEEED 10
PV DPE D
Sbjct: 305 PVNDPELPD 313


>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 4 GDPEEED 10
GDP+E+D
Sbjct: 157 GDPKEKD 163


>sp|SRP54_PYRAB|SIGNAL recognition particle 54 kDa|Pyrococcus abyssi (strain GE5 /

Query: 1 EPVGDPEEED 10
E GDP E+D
Sbjct: 157 EVFGDPNEKD 166


>sp|SRP54_PYRHO|SIGNAL recognition particle 54 kDa|Pyrococcus horikoshii (strain ATCC

Query: 1 EPVGDPEEED 10
E GDP E+D
Sbjct: 157 EVFGDPNEKD 166




27|SequenceR|140|131|SSKGKEPVGD

>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 2 SKGKEP 7
SKGKEP
Sbjct: 141 SKGKEP 146


>sp|PROA_METBF|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina barkeri (strain Fusaro /

Query: 3 KGKEPVGD 10
K K+PVGD
Sbjct: 92 KLKDPVGD 99


>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing]

Query: 1 SSKGKEPVG 9
S KG +P+G
Sbjct: 59 SEKGHQPMG 67


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 4 GKEPVGD 10
GKEP G+
Sbjct: 141 GKEPTGE 147


>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SKGKEP 7
SKGKEP
Sbjct: 275 SKGKEP 280




28|SequenceR|145|136|RASPGSSKGK

>sp|TRPD_METMA|ANTHRANILATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RASPGSSKG 9
RASPG +KG
Sbjct: 258 RASPGDTKG 266


>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 1 RASPGSSKGK 10
++ PG SKGK
Sbjct: 247 KSHPGYSKGK 256


>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 2 ASPGSSKGK 10
ASPG + GK
Sbjct: 342 ASPGIASGK 350


>sp|RL19E_PYRAB|LARGE ribosomal subunit protein eL19|Pyrococcus abyssi (strain GE5 /

Query: 4 PGSSKGK 10
PGS KGK
Sbjct: 78 PGSRKGK 84


>sp|RL19E_PYRFU|LARGE ribosomal subunit protein eL19|Pyrococcus furiosus (strain ATCC

Query: 4 PGSSKGK 10
PGS KGK
Sbjct: 78 PGSRKGK 84




29|SequenceR|150|141|QGKGKRASPG

>sp|DNLI_METST|DNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GKGKRA 7
GKGKRA
Sbjct: 442 GKGKRA 447


>sp|TRUA_PYRIL|TRNA pseudouridine synthase A|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GKGKRASPG 10
G+G R PG
Sbjct: 37 GRGSRTDPG 45


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QGKGKRASPG 10
QG GK PG
Sbjct: 162 QGCGKHLEPG 171


>sp|AROD_METVS|3-DEHYDROQUINATE dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 3 KGKRASPG 10
KGK ++PG
Sbjct: 196 KGKSSAPG 203


>sp|AROD_METJA|3-DEHYDROQUINATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KGKRASPG 10
KGK ++PG
Sbjct: 196 KGKSSAPG 203


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 2 GKGKRASPG 10
KGK SPG
Sbjct: 47 AKGKVVSPG 55


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 QGKGKRASPG 10
QG GK PG
Sbjct: 158 QGCGKHLEPG 167


>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC

Query: 2 GKGKRASPG 10
G+G R PG
Sbjct: 37 GRGSRTDPG 45


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GKGKRA 7
GKGKRA
Sbjct: 448 GKGKRA 453


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 4 GKRASPG 10
GKR +PG
Sbjct: 274 GKRVAPG 280


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 2 GKGKRA 7
GKGKRA
Sbjct: 156 GKGKRA 161


>sp|RPO2N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanococcus vannielii (strain ATCC

Query: 4 GKRASPG 10
GKR +PG
Sbjct: 274 GKRVAPG 280


>sp|RS11_METMJ|SMALL ribosomal subunit protein uS11|Methanoculleus marisnigri (strain

Query: 2 GKGKRASPG 10
G+GK+ SPG
Sbjct: 79 GRGKQRSPG 87


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QGKGKRASPG 10
QG GK PG
Sbjct: 165 QGCGKHLEPG 174


>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM

Query: 2 GKGKRASPG 10
G+G R PG
Sbjct: 37 GRGSRTDPG 45


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 QGKGKRASPG 10
QG GK PG
Sbjct: 158 QGCGKHLEPG 167


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QGKGKRASPG 10
QG GK PG
Sbjct: 165 QGCGKHLEPG 174


>sp|TRUA_PYRAR|TRNA pseudouridine synthase A|Pyrobaculum arsenaticum (strain DSM

Query: 2 GKGKRASPG 10
G+G R PG
Sbjct: 37 GRGSRTDPG 45


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 QGKGKRASPG 10
QG GK PG
Sbjct: 158 QGCGKHLEPG 167


>sp|RS11_METHJ|SMALL ribosomal subunit protein uS11|Methanospirillum hungatei JF-1

Query: 2 GKGKRASPG 10
G+GK+ SPG
Sbjct: 81 GRGKQRSPG 89


>sp|TRUA_PYRNV|TRNA pseudouridine synthase A|Pyrobaculum neutrophilum (strain DSM

Query: 2 GKGKRASPG 10
G+G R PG
Sbjct: 37 GRGSRTDPG 45


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QGKGKRASPG 10
QG GK PG
Sbjct: 161 QGCGKHLEPG 170




30|SequenceR|155|146|KRKEIQGKGK

>sp|AROD_THEVO|3-DEHYDROQUINATE dehydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KRKEIQGK 8
+RKEI GK
Sbjct: 170 QRKEISGK 177


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KRKEIQGKGK 10
K KEI+G G+
Sbjct: 284 KLKEIKGDGR 293


>sp|TDXH2_SULME|PEROXIREDOXIN 2|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 3 KEIQGKGK 10
K+I GKGK
Sbjct: 23 KDIFGKGK 30




31|SequenceR|160|151|RKERLKRKEI

>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 3 ERLKRKEI 10
E+L+RKEI
Sbjct: 42 EKLRRKEI 49


>sp|GGGPS_PICTO|GERANYLGERANYLGLYCERYL phosphate synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 ERLKRKEI 10
E+LKRK+I
Sbjct: 9 EKLKRKKI 16




32|SequenceR|165|156|VGTSRRKERL

***** No hits found ******


33|SequenceR|170|161|APINVVGTSR

>sp|Y1061_METJA|UNCHARACTERIZED membrane protein MJ1061|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PINVVGTSR 10
P+NV+G ++
Sbjct: 137 PVNVMGATK 145




34|SequenceR|175|166|DLCEAAPINV

>sp|RLME_METMA|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina mazei (strain

Query: 2 LCEAAP 7
LC+AAP
Sbjct: 107 LCDAAP 112


>sp|RLME_METBF|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina barkeri (strain

Query: 2 LCEAAP 7
LC+AAP
Sbjct: 107 LCDAAP 112


>sp|RLME_METAC|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina acetivorans

Query: 2 LCEAAP 7
LC+AAP
Sbjct: 107 LCDAAP 112


>sp|HYPA_METJA|HYDROGENASE maturation factor HypA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LCEAAPINV 10
+CE A INV
Sbjct: 61 VCEGAKINV 69


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLCEAAPI 8
+LC+ AP+
Sbjct: 279 ELCDGAPL 286


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DLCEAAPINV 10
D+C+ AP V
Sbjct: 279 DVCDGAPFYV 288


>sp|THIC1_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DLCEAAPI 8
+LC+ AP+
Sbjct: 279 ELCDGAPL 286




35|SequenceR|180|171|DDEYEDLCEA

>sp|RS3A_THEAC|SMALL ribosomal subunit protein eS1|Thermoplasma acidophilum (strain ATCC

Query: 1 DDEYEDLCEA 10
DD Y D+ EA
Sbjct: 165 DDSYNDMVEA 174


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DEYEDLCEA 10
D++EDLC+
Sbjct: 175 DDFEDLCQG 183


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DEYEDLCE 9
DEY LCE
Sbjct: 308 DEYTSLCE 315


>sp|AATD_METMA|A-TYPE ATP synthase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DEYEDLCE 9
D YEDL E
Sbjct: 134 DAYEDLVE 141


>sp|CH60_METHJ|CHAPERONIN GroEL|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DEYEDLCEA 10
D YEDL +A
Sbjct: 482 DTYEDLLQA 490


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 EYEDLCEA 10
E+EDLC+
Sbjct: 176 EFEDLCQG 183


>sp|Y7SR_METFE|UNCHARACTERIZED 28.5 kDa protein in|Methanothermus fervidus

Query: 4 YEDLCE 9
YE++CE
Sbjct: 218 YEEICE 223


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 3 EYEDLC 8
EY DLC
Sbjct: 129 EYPDLC 134


>sp|CDC6O_HALMA|ORC1-TYPE DNA replication protein 15|Haloarcula marismortui (strain ATCC

Query: 2 DEYEDLCEA 10
+EY LCE+
Sbjct: 324 EEYRSLCES 332


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 4 YEDLCE 9
YED CE
Sbjct: 534 YEDTCE 539


>sp|SERB_HALS3|PHOSPHOSERINE phosphatase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DDEYEDLCEA 10
DD D CEA
Sbjct: 142 DDALRDACEA 151


>sp|RL10_METKA|LARGE ribosomal subunit protein uL10|Methanopyrus kandleri (strain AV19 /

Query: 2 DEYEDLCE 9
DEYED+ +
Sbjct: 222 DEYEDMAK 229


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 4 YEDLCE 9
YED CE
Sbjct: 534 YEDTCE 539


>sp|CDC6A_HALSA|ORC1-TYPE DNA replication protein 10|Halobacterium salinarum (strain ATCC

Query: 2 DEYEDLCEA 10
DEY LC++
Sbjct: 327 DEYASLCKS 335


>sp|CDC6_PYRHO|ORC1-TYPE DNA replication protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 YEDLCE 9
Y DLCE
Sbjct: 338 YRDLCE 343


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 DEYEDLCE 9
D++EDL E
Sbjct: 698 DDFEDLLE 705




36|SequenceR|185|176|KQGAEDDEYE

>sp|PURO_METST|IMP cyclohydrolase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 QGAEDDEYE 10
QG+EDD Y+
Sbjct: 45 QGSEDDIYK 53


>sp|RL14E_PYRAE|LARGE ribosomal subunit protein eL14|Pyrobaculum aerophilum (strain

Query: 1 KQGAEDDE 8
K+GA DDE
Sbjct: 65 KRGASDDE 72


>sp|AGL7_HALVD|LOW-SALT glycan biosynthesis sulfotransferase Agl7|Haloferax volcanii

Query: 3 GAEDDEYE 10
G E+DEYE
Sbjct: 142 GFENDEYE 149




37|SequenceR|190|181|ERKREKQGAE

>sp|Y1455_PYRHO|UPF0091 protein PH1455|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ERKREKQGAE 10
E +EK+GAE
Sbjct: 111 EHLKEKEGAE 120


>sp|COMC_METFV|L-SULFOLACTATE dehydrogenase|Methanothermus fervidus (strain ATCC 43054

Query: 2 RKREKQGAE 10
+KREK+G E
Sbjct: 309 KKREKEGIE 317




38|SequenceR|195|186|QTIADERKRE

>sp|DPHB_NATPD|DIPHTHINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 TIADERKR 9
TIAD RKR
Sbjct: 153 TIADNRKR 160


>sp|NTPTH_PYRFU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IADERKRE 10
IADE KRE
Sbjct: 23 IADEIKRE 30


>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 TIADERK 8
TIA+ERK
Sbjct: 313 TIAEERK 319




39|SequenceR|200|191|QITNQQTIAD

>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 QITNQQTIA 9
+ITN QTIA
Sbjct: 103 EITNAQTIA 111




40|SequenceR|205|196|NVAENQITNQ

***** No hits found ******


41|SequenceR|210|201|GPDLLNVAEN

>sp|PGK_THESM|PHOSPHOGLYCERATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 DLLNVAEN 10
D LNVAEN
Sbjct: 203 DSLNVAEN 210


>sp|ARTA_NATPD|ARCHAEOSORTASE A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PDLLNVAE 9
P+LL++AE
Sbjct: 282 PELLDIAE 289


>sp|Y679_METMA|UPF0285 protein MM_0679|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DLLNVAEN 10
+LLN AEN
Sbjct: 224 ELLNAAEN 231


>sp|MRE11_PYRFU|DNA double-strand break repair protein|Pyrococcus furiosus (strain ATCC

Query: 1 GPDLLNVAEN 10
GP +LN+ E+
Sbjct: 91 GPSVLNLLED 100


>sp|RS4E_METAR|SMALL ribosomal subunit protein eS4|Methanocella arvoryzae (strain DSM

Query: 3 DLLNVAEN 10
DLL VA+N
Sbjct: 47 DLLKVADN 54


>sp|LYSY_PICTO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PDLLNVAE 9
PDLLN+ +
Sbjct: 46 PDLLNILD 53




42|SequenceR|215|206|LLYSSGPDLL

>sp|Y1128_METTH|UNCHARACTERIZED protein MTH_1128|Methanothermobacter thermautotrophicus (strain

Query: 2 LYSSGPDLL 10
LYS G DLL
Sbjct: 10 LYSEGGDLL 18


>sp|FTRL_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter

Query: 2 LYSSGPD 8
LYSS PD
Sbjct: 105 LYSSTPD 111


>sp|AOX2_AERPE|HEME-COPPER oxidase subunit 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 YSSGPDLL 10
Y+SGPD+
Sbjct: 215 YNSGPDVF 222


>sp|CHEF2_HALS3|TAXIS protein CheF2|Halobacterium salinarum (strain ATCC 29341

Query: 2 LYSSGPD 8
+YSSGP+
Sbjct: 229 IYSSGPN 235


>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LYSSGPDLL 10
LY++G DLL
Sbjct: 91 LYAAGQDLL 99


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 LYSSGPDLL 10
L SGPDL+
Sbjct: 587 LRHSGPDLI 595


>sp|R15PI_THEKO|RIBOSE 1,5-bisphosphate isomerase|Thermococcus kodakarensis (strain ATCC

Query: 1 LLYSSGPDL 9
+ YSSG DL
Sbjct: 82 IAYSSGADL 90


>sp|R15PI_PYRAB|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 LLYSSGPDL 9
+ YSSG DL
Sbjct: 84 IAYSSGADL 92


>sp|MTAD_HALWD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LLYSSGPDLL 10
L Y+SG D+L
Sbjct: 243 LTYASGLDML 252


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LYSSGPDLL 10
LY +G DLL
Sbjct: 94 LYGAGQDLL 102


>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain

Query: 2 LYSSGPDLL 10
LY +G DLL
Sbjct: 89 LYGAGQDLL 97


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 2 LYSSGPDLL 10
LY +G DLL
Sbjct: 86 LYGAGQDLL 94


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LYSSGPDLL 10
LY++G DLL
Sbjct: 89 LYAAGQDLL 97


>sp|FBPAP_THEON|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus onnurineus (strain NA1)

Query: 2 LYSSGPDLL 10
LY +G DLL
Sbjct: 93 LYGAGQDLL 101


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LYSSGPDLL 10
LY++G DLL
Sbjct: 89 LYAAGQDLL 97


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 LYSSGPDLL 10
LY +G DLL
Sbjct: 90 LYGAGQDLL 98


>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LYSSGPDLL 10
LY +G DLL
Sbjct: 93 LYGAGQDLL 101


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLYSSGPDLL 10
L+Y+ G D+L
Sbjct: 667 LIYAGGDDVL 676


>sp|GGGPS_METPE|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LYSSGPDLL 10
+Y GPD+L
Sbjct: 212 VYDLGPDVL 220




43|SequenceR|220|211|RPPEQLLYSS

>sp|DCDA_THEAC|DIAMINOPIMELATE decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PPEQLLYS 9
PPE +LYS
Sbjct: 96 PPEDILYS 103


>sp|HOSA_SACI7|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RPPEQL 6
RPPEQ+
Sbjct: 380 RPPEQI 385


>sp|HOSA_SACI6|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RPPEQL 6
RPPEQ+
Sbjct: 380 RPPEQI 385


>sp|HOSA_SACI4|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RPPEQL 6
RPPEQ+
Sbjct: 380 RPPEQI 385


>sp|HOSA_SACI3|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 RPPEQL 6
RPPEQ+
Sbjct: 380 RPPEQI 385


>sp|HOSA_SACI2|HOMOCITRATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RPPEQL 6
RPPEQ+
Sbjct: 380 RPPEQI 385


>sp|HOSA_SACI1|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RPPEQL 6
RPPEQ+
Sbjct: 380 RPPEQI 385


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 1 RPPEQLLY 8
RPP LLY
Sbjct: 50 RPPNMLLY 57


>sp|HOSA_SACS2|HOMOCITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RPPEQL 6
RPPEQ+
Sbjct: 380 RPPEQI 385


>sp|HCP_METMA|HYDROXYLAMINE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RPPEQL 6
+PPEQL
Sbjct: 351 KPPEQL 356


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 1 RPPEQLLY 8
RPP LLY
Sbjct: 50 RPPNLLLY 57


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PPEQLLY 8
PP++LLY
Sbjct: 274 PPDELLY 280


>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PEQLLYSS 10
P QLLY+S
Sbjct: 167 PSQLLYTS 174


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 RPPEQLLY 8
+PP+ L+Y
Sbjct: 273 KPPDDLMY 280




44|SequenceR|225|216|RGSVTRPPEQ

>sp|HEM4_METTH|PUTATIVE uroporphyrinogen-III synthase|Methanothermobacter

Query: 3 SVTRPPEQ 10
+VTRPPE+
Sbjct: 2 AVTRPPER 9


>sp|RL31_IGNH4|LARGE ribosomal subunit protein eL31|Ignicoccus hospitalis (strain

Query: 2 GSVTRPP 8
GS+T+PP
Sbjct: 61 GSITKPP 67


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 3 SVTRPPE 9
SVTRPP+
Sbjct: 385 SVTRPPK 391


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 2 GSVTRPP 8
GS+ RPP
Sbjct: 131 GSLVRPP 137


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RGSVTRPP 8
+G+VT PP
Sbjct: 553 KGAVTSPP 560


>sp|MFNA_HALSA|PROBABLE L-aspartate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 1 RGSVTRPPEQ 10
RG RPP++
Sbjct: 3 RGEARRPPQE 12


>sp|MFNA_HALS3|PROBABLE L-aspartate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 1 RGSVTRPPEQ 10
RG RPP++
Sbjct: 3 RGEARRPPQE 12




45|SequenceR|230|221|TTSKYRGSVT

***** No hits found ******


46|SequenceR|235|226|EESVSTTSKY

>sp|PELO_METJA|PROTEIN pelota homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ESVSTTSK 9
ES+STTS+
Sbjct: 226 ESISTTSR 233




47|SequenceR|240|231|RSSVDEESVS

>sp|AROB_AERPE|3-DEHYDROQUINATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RSSVDEESV 9
R SVDEE+V
Sbjct: 12 RLSVDEETV 20




48|SequenceR|245|236|DTRSYRSSVD

>sp|MFNB_METM5|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 2 TRSYRSSVD 10
TRSY+ +VD
Sbjct: 91 TRSYQEAVD 99


>sp|MFNB_METVS|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 TRSYRSSVD 10
TRSY+ +VD
Sbjct: 91 TRSYQEAVD 99


>sp|RIFK_PYRFU|RIBOFLAVIN kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DTRSYRSSVD 10
D R+YR +D
Sbjct: 159 DVRAYRVKID 168


>sp|RIFK_PYRAB|RIBOFLAVIN kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 DTRSYRSSVD 10
D R+YR +D
Sbjct: 159 DVRAYRVRID 168


>sp|RIFK_PYRHO|RIBOFLAVIN kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DTRSYRSSVD 10
D R+YR +D
Sbjct: 159 DVRAYRIKID 168


>sp|OTC_SULTO|ORNITHINE carbamoyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 RSYRSSVD 10
R+YR SVD
Sbjct: 245 RNYRVSVD 252




49|SequenceR|250|241|PFGSRDTRSY

>sp|RS24_METKA|SMALL ribosomal subunit protein eS24|Methanopyrus kandleri (strain AV19

Query: 2 FGSRDTRSY 10
FG R+T+ Y
Sbjct: 60 FGKRETKGY 68


>sp|Y1661_ARCFU|UNCHARACTERIZED protein AF_1661|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PFGSRDT 7
PFG RDT
Sbjct: 160 PFGCRDT 166


>sp|COFC_HALVD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 PFGSRDTRS 9
PFG RD ++
Sbjct: 6 PFGGRDPKT 14


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 2 FGSRDTRSY 10
FGS D R++
Sbjct: 627 FGSEDARTF 635


>sp|RFCL_HALMA|REPLICATION factor C large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 GSRDTRSY 10
G+R+TR Y
Sbjct: 339 GTRNTRDY 346




50|SequenceR|255|246|DRNYRPFGSR

>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 1 DRNYRPF 7
DRN+RP+
Sbjct: 31 DRNFRPY 37


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DRNYRPF 7
DRN+RP+
Sbjct: 31 DRNFRPY 37


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 DRNYRPF 7
DRN+RP+
Sbjct: 31 DRNFRPY 37


>sp|KAE1_SULAC|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfolobus acidocaldarius

Query: 1 DRNYRPFG 8
DR YR FG
Sbjct: 145 DRKYRVFG 152


>sp|MTRH_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanopyrus kandleri (strain AV19 /

Query: 1 DRNYRPFGS 9
D Y PFGS
Sbjct: 197 DTAYTPFGS 205


>sp|KAE1_PYRAR|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum arsenaticum

Query: 1 DRNYRPFG 8
DR YR FG
Sbjct: 142 DRRYRIFG 149


>sp|AATD_META3|A-TYPE ATP synthase subunit D|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DRNYRPFG 8
DR Y P+G
Sbjct: 116 DRGYGPYG 123


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 DRNYRPF 7
+R+YRPF
Sbjct: 28 NRSYRPF 34


>sp|AGLR_HALVD|PROBABLE flippase AglR|Haloferax volcanii (strain ATCC 29605

Query: 3 NYRPFG 8
NYRP G
Sbjct: 431 NYRPIG 436


>sp|PUR2_THEKO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DRNYRPFGSR 10
D N+R GSR
Sbjct: 368 DENFRMLGSR 377


>sp|FAEHP_ARCFU|BIFUNCTIONAL enzyme Fae/Hps|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DRNYRPFGSR 10
DR++ PF R
Sbjct: 156 DRSFHPFVGR 165


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 1 DRNYRPFGS 9
D+NY PF S
Sbjct: 257 DQNYSPFLS 265


>sp|Y157_METAC|UPF0251 protein MA_0157|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RNYRPFG 8
R +RPFG
Sbjct: 16 RQFRPFG 22


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 1 DRNYRPFGS 9
D+NY PF S
Sbjct: 257 DQNYSPFLS 265


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 1 DRNYRPF 7
+R+YRPF
Sbjct: 28 ERSYRPF 34


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 1 DRNYRPF 7
DR YRP
Sbjct: 194 DRKYRPL 200


>sp|PUR2_PYRFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DRNYRPFGSR 10
D NY GSR
Sbjct: 370 DENYTLLGSR 379


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DRNYRPF 7
D N+RP+
Sbjct: 37 DNNFRPY 43


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RNYRPFGSR 10
RNY FG R
Sbjct: 458 RNYLNFGKR 466




51|SequenceR|260|251|GSVNADRNYR

>sp|FLAK_METVO|PREFLAGELLIN peptidase|Methanococcus voltae

Query: 2 SVNADRNY 9
SVN D+NY
Sbjct: 182 SVNDDKNY 189


>sp|TRPD_METVS|ANTHRANILATE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 GSVNADRNY 9
G +N DRN+
Sbjct: 269 GKINEDRNF 277


>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 GSVNADRNY 9
G +N DRN+
Sbjct: 269 GKINEDRNF 277


>sp|TRPD_METMP|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 GSVNADRNY 9
G +N DRN+
Sbjct: 269 GKINEDRNF 277


>sp|GLCAE_SULTO|D-GLUCOSAMINE-6-PHOSPHATE 4-epimerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GSVNADRN 8
G +NAD+N
Sbjct: 303 GDINADQN 310


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 1 GSVNADR 7
G+VNADR
Sbjct: 349 GNVNADR 355


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 GSVNADRNY 9
G +N DRN+
Sbjct: 269 GKLNEDRNF 277


>sp|CSG_HALVD|CELL surface glycoprotein|Haloferax volcanii (strain ATCC 29605

Query: 3 VNADRNYR 10
VNAD NY
Sbjct: 153 VNADYNYE 160




52|SequenceR|265|256|SSVLTGSVNA

>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SVLTGSVNA 10
SVL+G VN+
Sbjct: 15 SVLSGGVNS 23


>sp|TPIS_METTH|TRIOSEPHOSPHATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 SVLTGSVNA 10
V+TGSV+A
Sbjct: 165 EVITGSVDA 173


>sp|Y1441_METTH|UPF0285 protein MTH_1441|Methanothermobacter thermautotrophicus (strain

Query: 3 VLTGSVNA 10
VLTGSV A
Sbjct: 272 VLTGSVGA 279


>sp|IF6_ARCFU|TRANSLATION initiation factor 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SVLTGSVN 9
VLTG+VN
Sbjct: 171 EVLTGTVN 178




53|SequenceR|270|261|KELTSSSVLT

***** No hits found ******


54|SequenceR|275|266|LDEIKKELTS

>sp|MPTA_KORCO|GTP cyclohydrolase MptA|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LDEIKKELTS 10
LDEI+KE++S
Sbjct: 269 LDEIRKEISS 278


>sp|FAU1_HALMA|PROBABLE ribonuclease FAU-1|Haloarcula marismortui (strain ATCC 43049

Query: 1 LDEIKKELTS 10
LDE+++E+TS
Sbjct: 257 LDEVRREVTS 266


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LDEIKKELT 9
+E+KKELT
Sbjct: 158 FEEVKKELT 166


>sp|TFE_METVS|TRANSCRIPTION factor E|Methanococcus vannielii (strain ATCC 35089

Query: 1 LDEIKKELTS 10
LDE+KK+L++
Sbjct: 99 LDELKKQLST 108


>sp|RS25_SACS2|SMALL ribosomal subunit protein eS25|Saccharolobus solfataricus (strain

Query: 1 LDEIKKE 7
LDEIKKE
Sbjct: 56 LDEIKKE 62


>sp|DPCKG_SULTO|GTP-DEPENDENT dephospho-CoA kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DEIKKELT 9
D IKKELT
Sbjct: 3 DSIKKELT 10


>sp|RL14E_METTH|LARGE ribosomal subunit protein eL14|Methanothermobacter

Query: 1 LDEIKKELTS 10
++EIKKEL S
Sbjct: 64 IEEIKKELES 73


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LDEIKKE 7
LDEIKKE
Sbjct: 315 LDEIKKE 321


>sp|EI2BL_PYRAB|PUTATIVE translation initiation factor eIF-2B|Pyrococcus abyssi (strain GE5

Query: 1 LDEIKKELTS 10
+DE K+EL S
Sbjct: 92 MDEAKRELAS 101


>sp|PDXT_SACS2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus solfataricus

Query: 1 LDEIKKELTS 10
LDE+K+++TS
Sbjct: 67 LDELKEKITS 76


>sp|PDXT_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 LDEIKKELTS 10
LDE+K+++TS
Sbjct: 67 LDELKEKITS 76


>sp|PDXT_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 LDEIKKELTS 10
LDE+K+++TS
Sbjct: 67 LDELKEKITS 76


>sp|PDXT_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 LDEIKKELTS 10
LDE+K+++TS
Sbjct: 67 LDELKEKITS 76


>sp|PDXT_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 LDEIKKELTS 10
LDE+K+++TS
Sbjct: 67 LDELKEKITS 76


>sp|PDXT_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 LDEIKKELTS 10
LDE+K+++TS
Sbjct: 67 LDELKEKITS 76


>sp|PDXT_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 LDEIKKELTS 10
LDE+K+++TS
Sbjct: 67 LDELKEKITS 76


>sp|SYFA_PYRAR|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LDEIKKEL 8
LDE+ KEL
Sbjct: 21 LDEVAKEL 28


>sp|RLME_METTP|RIBOSOMAL RNA large subunit methyltransferase|Methanothrix thermoacetophila

Query: 1 LDEIKKELTS 10
L+E+K+E +S
Sbjct: 159 LEEVKREFSS 168


>sp|NADM_ARCFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LDEIKKEL 8
+DEIK+EL
Sbjct: 60 VDEIKREL 67


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 1 LDEIKKELT 9
LDEI++E+T
Sbjct: 7 LDEIRREVT 15


>sp|PCNA_METLZ|DNA polymerase sliding clamp|Methanocorpusculum labreanum (strain ATCC

Query: 2 DEIKKELT 9
D IK+ELT
Sbjct: 172 DRIKRELT 179


>sp|PUR1_PYRHO|AMIDOPHOSPHORIBOSYLTRANSFERASE horikoshii (strain ATCC 700860

Query: 1 LDEIKKEL 8
++EIKKE+
Sbjct: 402 IEEIKKEI 409


>sp|TRPC_METTM|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 1 LDEIKKELTS 10
L+E++ ELTS
Sbjct: 24 LEELRDELTS 33


>sp|TFE_CENSY|TRANSCRIPTION factor E|Cenarchaeum symbiosum (strain A)

Query: 1 LDEIKKEL 8
+DEIKK+L
Sbjct: 160 IDEIKKDL 167


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 2 DEIKKEL 8
DEIKKE+
Sbjct: 461 DEIKKEV 467


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDEIKKEL 8
LDEIKK+L
Sbjct: 59 LDEIKKKL 66


>sp|TRM14_METJA|TRNA (guanine(6)-N2)-methyltransferase|Methanocaldococcus jannaschii

Query: 1 LDEIKKELT 9
LD+IKKE+
Sbjct: 241 LDKIKKEIV 249


>sp|FEN_SULTO|FLAP endonuclease 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LDEIKKELT 9
++EIKKEL+
Sbjct: 7 VEEIKKELS 15




55|SequenceR|280|271|VVEKELDEIK

>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VVEKELDEI 9
+VEK+LDEI
Sbjct: 7 IVEKQLDEI 15


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VVEKELDEI 9
+VEK+LDEI
Sbjct: 7 IVEKQLDEI 15


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VVEKELDEI 9
+VEK+LDEI
Sbjct: 7 IVEKQLDEI 15


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VVEKELDEI 9
VVEK+LDEI
Sbjct: 7 VVEKQLDEI 15


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VVEKELDEI 9
+VEK+LDEI
Sbjct: 7 IVEKQLDEI 15


>sp|MOAB_METJA|PROBABLE molybdopterin adenylyltransferase|Methanocaldococcus jannaschii

Query: 1 VVEKELDEIK 10
++EKELD K
Sbjct: 93 IIEKELDGFK 102


>sp|TRM56_PICTO|TRNA (cytidine(56)-2'-O)-methyltransferase|Picrophilus torridus

Query: 2 VEKELDEIK 10
+EK +DEIK
Sbjct: 86 IEKRIDEIK 94


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 2 VEKELDEIK 10
+E+E+DE+K
Sbjct: 210 IEREIDELK 218


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVEKELDEI 9
+ EKE+DEI
Sbjct: 259 LTEKEMDEI 267


>sp|PCP_PYRFU|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVEKELDEIK 10
V+EK L+EIK
Sbjct: 51 VLEKTLEEIK 60


>sp|Y1665_METJA|UPF0210 protein MJ1665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VEKELDEIK 10
V K+LDE+K
Sbjct: 34 VSKDLDELK 42


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VEKELDEIK 10
VEKE++E+K
Sbjct: 233 VEKEIEEVK 241


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus fulgidus

Query: 2 VEKELDEIK 10
VEK DEIK
Sbjct: 334 VEKPYDEIK 342


>sp|SYT_THEON|THREONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 VVEKELDEIK 10
VVEK ++EIK
Sbjct: 56 VVEKAVNEIK 65


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 VVEKELDEIK 10
+VEK DE+K
Sbjct: 411 IVEKRADELK 420




56|SequenceR|285|276|EQRERVVEKE

>sp|Y1330_METJA|UNCHARACTERIZED protein MJ1330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EQRERVVEK 9
E+R+RV EK
Sbjct: 13 EERDRVKEK 21


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 1 EQRERVVEK 9
+QRER VE+
Sbjct: 516 QQRERAVER 524




57|SequenceR|290|281|VLRLNEQRER

>sp|TRM56_METKA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanopyrus kandleri

Query: 1 VLRLNEQRER 10
VLRL +RER
Sbjct: 9 VLRLGHRRER 18


>sp|CG121_METJA|REGULATORY protein Cgi121|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLRLNEQRER 10
VL +NE +ER
Sbjct: 106 VLEINEDKER 115


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 RLNEQRER 10
++NE+RER
Sbjct: 584 KINEERER 591


>sp|DAPF_ARCFU|DIAMINOPIMELATE epimerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLRLNEQR 8
+LRLNE R
Sbjct: 270 ILRLNELR 277




58|SequenceR|295|286|DQMLRVLRLN

***** No hits found ******


59|SequenceR|300|291|IMEEKDQMLR

>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IMEEKDQMLR 10
I E KD+MLR
Sbjct: 408 ITEIKDKMLR 417


>sp|Y761_ARCFU|UNCHARACTERIZED protein AF_0761|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IMEEKDQML 9
IM+EK QM+
Sbjct: 4 IMDEKGQMI 12




60|SequenceR|305|296|EKLKGIMEEK

>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 EKLKGIMEEK 10
EKLK I EEK
Sbjct: 96 EKLKAIYEEK 105


>sp|KAD6_METMA|PUTATIVE adenylate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EKLKGIMEEK 10
E+L GI+EE+
Sbjct: 60 ERLSGILEEE 69


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 1 EKLKGIMEEK 10
EKLK ++EEK
Sbjct: 47 EKLKDLIEEK 56


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EKLKGIMEE 9
E LKGI+E+
Sbjct: 148 EALKGILEQ 156


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EKLKGIMEEK 10
EKL GI++E
Sbjct: 62 EKLYGILDEN 71


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 1 EKLKGIMEEK 10
+++KG+ME K
Sbjct: 539 KEIKGLMEGK 548


>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KLKGIMEEK 10
K++GI++EK
Sbjct: 300 KIRGIIDEK 308


>sp|SECD_METP4|PROTEIN-EXPORT membrane protein SecD|Methanolacinia petrolearia (strain DSM 11571

Query: 1 EKLKGIMEEK 10
+ +KGI+E+K
Sbjct: 133 DTVKGILEDK 142


>sp|TOP6A_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EKLKGIMEEK 10
EKLKGI +K
Sbjct: 305 EKLKGIPPDK 314


>sp|TOP6A_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 1 EKLKGIMEEK 10
EKLKGI +K
Sbjct: 305 EKLKGIPPDK 314


>sp|TOP6A_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EKLKGIMEEK 10
EKLKGI +K
Sbjct: 305 EKLKGIPPDK 314


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EKLKGIMEEK 10
EKL GI++E
Sbjct: 62 EKLYGILDEN 71




61|SequenceR|310|301|LLDIEEKLKG

>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LDIEEKLKG 10
+D+E+KLKG
Sbjct: 249 IDVEDKLKG 257


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LDIEEKLK 9
LD+EEKLK
Sbjct: 322 LDVEEKLK 329


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DIEEKLK 9
DIEE+LK
Sbjct: 339 DIEERLK 345


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LDIEEKLK 9
LDIEEK+K
Sbjct: 978 LDIEEKIK 985


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LDIEEKLKG 10
++IEEK+KG
Sbjct: 263 IEIEEKIKG 271


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDIEEKLK 9
LDIEEK+K
Sbjct: 976 LDIEEKIK 983


>sp|MCRB_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 1 LLDIEEKLKG 10
+LDI +KL+G
Sbjct: 178 MLDIPQKLEG 187


>sp|DHYS_PYRAB|PROBABLE deoxyhypusine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 LLDIEEKLK 9
+LDIE KLK
Sbjct: 160 ILDIERKLK 168


>sp|MCRB_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 1 LLDIEEKLKG 10
+LDI +KL+G
Sbjct: 178 MLDIPQKLEG 187


>sp|Y1954_ARCFU|PUTATIVE amidase AF_1954|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LDIEEKLKG 10
+DI EKLKG
Sbjct: 5 VDIVEKLKG 13


>sp|MCRB_METFE|METHYL-COENZYME M reductase subunit beta|Methanothermus fervidus

Query: 1 LLDIEEKLKG 10
+LDI +KL+G
Sbjct: 178 MLDIPQKLEG 187


>sp|Y755_METJA|UNCHARACTERIZED protein MJ0755|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DIEEKLK 9
D+EEKLK
Sbjct: 245 DLEEKLK 251


>sp|RAD50_SULTO|DNA double-strand break repair Rad50|Sulfurisphaera tokodaii (strain

Query: 1 LLDIEEKLK 9
L D+EEKLK
Sbjct: 320 LTDLEEKLK 328


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 2 LDIEEKLKG 10
+DIE+K++G
Sbjct: 787 VDIEKKIEG 795


>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 IEEKLKG 10
IEE+LKG
Sbjct: 184 IEERLKG 190


>sp|SYY_SACI7|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LDIEEKLKG 10
L+ EEKLKG
Sbjct: 27 LESEEKLKG 35


>sp|SYY_SACI6|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LDIEEKLKG 10
L+ EEKLKG
Sbjct: 27 LESEEKLKG 35


>sp|SYY_SACI4|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LDIEEKLKG 10
L+ EEKLKG
Sbjct: 27 LESEEKLKG 35


>sp|SYY_SACI3|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 LDIEEKLKG 10
L+ EEKLKG
Sbjct: 27 LESEEKLKG 35


>sp|SYY_SACI2|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LDIEEKLKG 10
L+ EEKLKG
Sbjct: 27 LESEEKLKG 35


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 DIEEKLK 9
D+EEKLK
Sbjct: 87 DLEEKLK 93


>sp|THIE_METMP|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LLDIEEKLKG 10
++ +EE LKG
Sbjct: 21 VISVEESLKG 30


>sp|PMDHL_METJA|PHOSPHOMEVALONATE dehydratase large subunit|Methanocaldococcus jannaschii (strain

Query: 3 DIEEKLKG 10
DIEE LKG
Sbjct: 395 DIEELLKG 402


>sp|LYSK_THEKO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Thermococcus kodakarensis

Query: 1 LLDIEEKLKG 10
L+D+ E+LKG
Sbjct: 315 LVDVIEELKG 324


>sp|HCGC_METJA|6-CARBOXYMETHYL-5-METHYL-4-HYDROXYPYRIDIN-2-OL 3-C-methyltransferase HcgC|Methanocaldococcus jannaschii (strain

Query: 1 LLDIEEKLKG 10
L+DI E +KG
Sbjct: 75 LVDIHEFMKG 84


>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 LDIEEKLK 9
+D+EE+LK
Sbjct: 1 MDVEERLK 8


>sp|PSB2_PYRFU|PROTEASOME subunit beta 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLDIEEKLKG 10
+L ++EKLKG
Sbjct: 1 MLHLKEKLKG 10


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LDIEEKLK 9
+DIEE++K
Sbjct: 1 MDIEERIK 8


>sp|RIBL_METB6|FAD synthase|Methanoregula boonei (strain DSM 21154

Query: 5 EEKLKG 10
EEKLKG
Sbjct: 99 EEKLKG 104




62|SequenceR|315|306|DLDRNLLDIE

>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLDRNLLDI 9
D+DRN++D+
Sbjct: 102 DIDRNVIDL 110


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 DRNLLDIE 10
DR L+D+E
Sbjct: 45 DRGLVDVE 52


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 RNLLDIE 10
RNLLD++
Sbjct: 56 RNLLDVD 62


>sp|REG4_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF0864|Pyrococcus furiosus

Query: 1 DLDRNLL 7
DLDRN+L
Sbjct: 8 DLDRNIL 14




63|SequenceR|320|311|EDEIDDLDRN

>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DEIDDLDRN 10
DE+DDL+RN
Sbjct: 201 DELDDLERN 209


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 3 EIDDLDR 9
+IDDLDR
Sbjct: 445 KIDDLDR 451


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 3 EIDDLDRN 10
EIDDL+RN
Sbjct: 989 EIDDLERN 996


>sp|REG4_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF0864|Pyrococcus furiosus

Query: 1 EDEIDDLDRN 10
E +DDLDRN
Sbjct: 3 EIHLDDLDRN 12


>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EDEIDDLDR 9
ED+++DL R
Sbjct: 241 EDKVNDLQR 249


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 3 EIDDLDR 9
++DDLDR
Sbjct: 444 KVDDLDR 450


>sp|Y1518_METJA|UNCHARACTERIZED protein MJ1518|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDEIDDLDR 9
EDEID +DR
Sbjct: 12 EDEIDSVDR 20


>sp|REG8_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF1734|Pyrococcus furiosus

Query: 3 EIDDLDRN 10
EIDDLDR
Sbjct: 2 EIDDLDRK 9


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EDEIDDLDR 9
EDE+++L+R
Sbjct: 174 EDELEELER 182


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 1 EDEIDDLDR 9
E+EID++DR
Sbjct: 500 EEEIDEVDR 508


>sp|HISX_PICTO|HISTIDINOL dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 EDEIDDLDRN 10
+DEI+D D++
Sbjct: 40 DDEIEDADKS 49


>sp|GATE_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Haloarcula marismortui (strain ATCC

Query: 2 DEIDDLDRN 10
D+IDDL RN
Sbjct: 247 DDIDDLVRN 255


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 EIDDLDRN 10
E+DDLDR
Sbjct: 425 ELDDLDRQ 432


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EDEIDDLDR 9
ED + D+DR
Sbjct: 396 EDSLSDVDR 404


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 1 EDEIDDLDR 9
E +DDLDR
Sbjct: 499 ETTVDDLDR 507


>sp|APGM_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EDEIDDLD 8
EDE+DD++
Sbjct: 363 EDEVDDVE 370




64|SequenceR|325|316|KLQENEDEID

>sp|AROA_NITMS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 KLQENED 7
K+QENED
Sbjct: 350 KVQENED 356


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 2 LQENEDEID 10
L+ NE E+D
Sbjct: 1003 LERNEQELD 1011




65|SequenceR|330|321|TKNEQKLQEN

>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 EQKLQEN 10
E+K+QEN
Sbjct: 425 EEKIQEN 431


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 1 TKNEQKLQEN 10
T+NE +++EN
Sbjct: 279 TRNELRIEEN 288




66|SequenceR|340|326|RTLQGVVKLLTKNEQ

>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 RTLQGVVKLLTKNEQ 15
RT+QG +K++ + EQ
Sbjct: 108 RTVQGALKIMWELEQ 122


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 RTLQGVVKLLTKNEQ 15
RT+QG +K++ + EQ
Sbjct: 108 RTVQGALKIMWELEQ 122


>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 5 GVVKLLTKNEQ 15
GVVK + KNEQ
Sbjct: 191 GVVKEVPKNEQ 201


>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 1 RTLQGVVKLLTK 12
RTL G+V+ LT+
Sbjct: 749 RTLGGIVERLTR 760


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LQGVVKLLTK 12
+QGV ++LTK
Sbjct: 87 MQGVARVLTK 96


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 RTLQGVVKLLTKNEQ 15
RT+QG ++++ + EQ
Sbjct: 108 RTVQGALRIMWELEQ 122


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 RTLQGVVKLLTKN 13
RTL GV+ L++ N
Sbjct: 292 RTLPGVMVLMSGN 304


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RTLQGVVKLLTKNE 14
R + +KLL KNE
Sbjct: 277 RLFEKTIKLLEKNE 290


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 4 QGVVKLLTKNEQ 15
QGV+ +T NE
Sbjct: 376 QGVLNFITHNEH 387


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 RTLQGVVKLL 10
RT+QG +K++
Sbjct: 108 RTIQGALKIM 117


>sp|PTAS_METTE|PHOSPHATE acetyltransferase|Methanosarcina thermophila

Query: 1 RTLQGVVKLLTK 12
RTLQ K+L +
Sbjct: 28 RTLQAAAKILER 39


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 RTLQGVVKLL 10
RT+QG++++L
Sbjct: 113 RTIQGLLEIL 122


>sp|RS25_SULTO|SMALL ribosomal subunit protein eS25|Sulfurisphaera tokodaii (strain

Query: 4 QGVVKLLTKN 13
QGVVK+ TK+
Sbjct: 90 QGVVKIGTKD 99


>sp|PRIS_STAMF|DNA primase small subunit PriS|Staphylothermus marinus (strain ATCC

Query: 2 TLQGVVKLLT 11
TL+G+VK+++
Sbjct: 359 TLKGIVKIIS 368


>sp|Y3409_METJA|UNCHARACTERIZED protein MJECS09|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LQGVVKLLT 11
L+G +KLLT
Sbjct: 79 LKGTIKLLT 87


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 RTLQGVVKLLTKNEQ 15
RT+QG + ++ + EQ
Sbjct: 108 RTVQGALAIMWELEQ 122


>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 5 GVVKLLTKN 13
G VKL TKN
Sbjct: 24 GSVKLATKN 32


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 5 GVVKLLTKNEQ 15
GVV +T NE
Sbjct: 377 GVVNFITHNEH 387


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 1 RTLQGVVKLLTKNEQ 15
R L+ + +LT+NE+
Sbjct: 56 RHLESIEYILTQNEK 70


>sp|Y649_ARCFU|UPF0280 protein AF_0649|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 QGVVKLLTKNEQ 15
+ +V +LT+NE+
Sbjct: 10 ETIVTILTENEE 21


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 RTLQGVVKLLTKNE 14
R GV+KLL + E
Sbjct: 725 RAFYGVMKLLREYE 738


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 3 LQGVVKLLTKNEQ 15
LQG+ ++TK +
Sbjct: 130 LQGIADVITKKNK 142


>sp|Y1344_METBU|PROTEIN Mbur_1344|Methanococcoides burtonii (strain DSM 6242

Query: 3 LQGVVKLLTKN 13
L+GV LTKN
Sbjct: 40 LRGVFVTLTKN 50




67|SequenceR|340|331|RTLQGVVKLL

>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 RTLQGVVKLL 10
RT+QG +K++
Sbjct: 108 RTIQGALKIM 117


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 RTLQGVVKLL 10
RT+QG +K++
Sbjct: 108 RTVQGALKIM 117


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 RTLQGVVKLL 10
RT+QG +K++
Sbjct: 108 RTVQGALKIM 117


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 RTLQGVVKLL 10
RT+QG++++L
Sbjct: 113 RTIQGLLEIL 122


>sp|PRIS_STAMF|DNA primase small subunit PriS|Staphylothermus marinus (strain ATCC

Query: 2 TLQGVVKLL 10
TL+G+VK++
Sbjct: 359 TLKGIVKII 367


>sp|PTAS_METTE|PHOSPHATE acetyltransferase|Methanosarcina thermophila

Query: 1 RTLQGVVKLL 10
RTLQ K+L
Sbjct: 28 RTLQAAAKIL 37


>sp|RL2_THEKO|LARGE ribosomal subunit protein uL2|Thermococcus kodakarensis (strain

Query: 1 RTLQGVVK 8
RTL+GVV+
Sbjct: 39 RTLRGVVE 46




THE END