PACRG_HUMAN Blast OutputR
Viruses
1|SequenceR|10|1|LSLTEKEAVM

>sp|KIT_FSVHZ|TYROSINE-PROTEIN kinase transforming protein kit|Feline sarcoma virus (strain

Query: 3 LTEKEAVM 10
LTE+EA+M
Sbjct: 69 LTEREALM 76




2|SequenceR|15|6|DPCKNLSLTE

>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)

Query: 2 PCKNLSLTE 10
PC+N+S+ E
Sbjct: 1820 PCENISVLE 1828


>sp|YL426_MIMIV|UNCHARACTERIZED protein L426|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PCKNLSLTE 10
PCK+ LTE
Sbjct: 170 PCKSFDLTE 178


>sp|TIPK_BPN15|TAIL tip assembly protein K|Escherichia phage N15 (Bacteriophage N15)

Query: 2 PCKNLS 7
PC+NLS
Sbjct: 36 PCRNLS 41


>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 PCKNLSLTE 10
PCKN+S +
Sbjct: 245 PCKNVSTVQ 253


>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 PCKNLSLTE 10
PCKN+S +
Sbjct: 236 PCKNVSTVQ 244


>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 PCKNLSLTE 10
PCKN+S +
Sbjct: 229 PCKNVSTVQ 237


>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 PCKNLSLTE 10
PCKN+S +
Sbjct: 251 PCKNVSTVQ 259


>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 PCKNLSLTE 10
PCKN+S +
Sbjct: 234 PCKNVSTVQ 242


>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 PCKNLSLTE 10
PCKN+S +
Sbjct: 240 PCKNVSTVQ 248


>sp|VF354_ASFK5|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 4 KNLSLTE 10
KNLSLTE
Sbjct: 179 KNLSLTE 185


>sp|YL199_MIMIV|UNCHARACTERIZED protein L199|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PCKNLSLTE 10
PC NLS+ E
Sbjct: 201 PCFNLSVVE 209


>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b

Query: 1 DPCKNLSLTE 10
DP KNLS E
Sbjct: 434 DPYKNLSFWE 443


>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a

Query: 1 DPCKNLSLTE 10
DP KNLS E
Sbjct: 434 DPYKNLSFWE 443


>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 2 PCKNLSLTE 10
PCKN+S +
Sbjct: 235 PCKNVSTVQ 243




3|SequenceR|20|11|RKPMKDPCKN

>sp|TRM1_EHV2|TRIPARTITE terminase subunit 1|Equine herpesvirus 2 (strain 86/87)

Query: 2 KPMKDPCK 9
+P++ PCK
Sbjct: 103 RPLEGPCK 110


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 RKPMKDPC 8
++P K+PC
Sbjct: 500 KQPKKEPC 507


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 RKPMKDPC 8
++P K+PC
Sbjct: 500 KQPKKEPC 507


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 5 KDPCKN 10
KDPC N
Sbjct: 1105 KDPCSN 1110


>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus

Query: 2 KPMKDP 7
KP+KDP
Sbjct: 1763 KPLKDP 1768


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 5 KDPCKN 10
KDPC N
Sbjct: 1105 KDPCSN 1110


>sp|POLG_SMSV4|GENOME polyprotein|San Miguel sea lion virus

Query: 2 KPMKDPCKN 10
KP+KDP N
Sbjct: 598 KPIKDPWGN 606


>sp|CHMA_BPDPK|CHIMALLIN phage phiKZ

Query: 3 PMKDPCKN 10
P+KD C N
Sbjct: 245 PVKDSCGN 252


>sp|YL690_MIMIV|UNCHARACTERIZED protein L690|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 PMKDPC 8
P KDPC
Sbjct: 11 PCKDPC 16


>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus

Query: 2 KPMKDPCKN 10
KP+KDP N
Sbjct: 1263 KPIKDPWGN 1271


>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus

Query: 2 KPMKDPCKN 10
KP+KDP N
Sbjct: 1263 KPIKDPWGN 1271


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 3 PMKDPCKN 10
P+ DPC N
Sbjct: 2089 PLGDPCAN 2096


>sp|AV2_CLVK|PROTEIN AV2|African cassava mosaic virus (isolate

Query: 1 RKPMKDPC 8
R+P+++PC
Sbjct: 77 RQPIQEPC 84


>sp|VP91_NPVEP|CAPSID-ASSOCIATED protein Vp91|Epiphyas postvittana nucleopolyhedrovirus (EppoMNPV)

Query: 2 KPMKDPCKN 10
KP+ DP KN
Sbjct: 633 KPLFDPFKN 641


>sp|AV2_CLVN|UNCHARACTERIZED 13.1 kDa protein|African cassava mosaic virus (isolate

Query: 1 RKPMKDPC 8
R+P+++PC
Sbjct: 77 RQPIQEPC 84


>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United

Query: 2 KPMKDPCKN 10
K MKD C N
Sbjct: 562 KSMKDSCCN 570


>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)

Query: 1 RKPMKDPC 8
R P DPC
Sbjct: 97 RNPPPDPC 104


>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)

Query: 2 KPMKDPCKN 10
K MKD C N
Sbjct: 562 KSMKDSCCN 570


>sp|GD_SUHVR|ENVELOPE glycoprotein D|Suid herpesvirus 1 (strain Rice)

Query: 2 KPMKDPC 8
+P++DPC
Sbjct: 60 RPLEDPC 66


>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)

Query: 1 RKPMKDPCK 9
++ +KDPCK
Sbjct: 564 QQTVKDPCK 572


>sp|RDRP_IBDVA|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus

Query: 1 RKPMKDPCK 9
R P KDP K
Sbjct: 185 RNPNKDPLK 193




4|SequenceR|25|16|ALLKTRKPMK

>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 3 LKTRKPMK 10
LKTRKP+K
Sbjct: 317 LKTRKPLK 324


>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca

Query: 3 LKTRKPMK 10
LKTRKP+K
Sbjct: 317 LKTRKPLK 324


>sp|REP_MSVTA|REPLICATION-ASSOCIATED protein|Maize streak virus genotype B

Query: 1 ALLKTRKPMK 10
ALL+T KP++
Sbjct: 63 ALLQTEKPVR 72


>sp|REP_MSVN|REPLICATION-ASSOCIATED protein|Maize streak virus genotype A

Query: 1 ALLKTRKPMK 10
ALL+T KP++
Sbjct: 63 ALLQTEKPVR 72


>sp|REP_MSVK|REPLICATION-ASSOCIATED protein|Maize streak virus genotype A

Query: 1 ALLKTRKPMK 10
ALL+T KP++
Sbjct: 63 ALLQTEKPVR 72


>sp|REP_MSVS|REPLICATION-ASSOCIATED protein|Maize streak virus genotype A

Query: 1 ALLKTRKPMK 10
ALL+T KP++
Sbjct: 63 ALLQTEKPVR 72


>sp|REPA_MSVTA|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype B

Query: 1 ALLKTRKPMK 10
ALL+T KP++
Sbjct: 63 ALLQTEKPVR 72


>sp|REPA_MSVK|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype A

Query: 1 ALLKTRKPMK 10
ALL+T KP++
Sbjct: 63 ALLQTEKPVR 72


>sp|REP_MSVPA|REPLICATION-ASSOCIATED protein|Maize streak virus genotype E

Query: 1 ALLKTRKPMK 10
ALL+T KP++
Sbjct: 63 ALLQTDKPVR 72


>sp|REPA_MSVN|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype A

Query: 1 ALLKTRKPMK 10
ALL+T KP++
Sbjct: 63 ALLQTEKPVR 72


>sp|REPA_MSVS|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype A

Query: 1 ALLKTRKPMK 10
ALL+T KP++
Sbjct: 63 ALLQTEKPVR 72


>sp|REPA_MSVPA|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype E

Query: 1 ALLKTRKPMK 10
ALL+T KP++
Sbjct: 63 ALLQTDKPVR 72


>sp|PHOSP_MPV15|PHOSPHOPROTEIN pneumonia virus (strain 15)

Query: 4 KTRKPM 9
KTRKPM
Sbjct: 123 KTRKPM 128




5|SequenceR|30|21|PLPQQALLKT

>sp|VF859_ASFK5|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 2 LPQQALLKT 10
LP+Q +LKT
Sbjct: 442 LPRQVILKT 450


>sp|VF859_ASFB7|PROBABLE helicase A859L|African swine fever virus (strain

Query: 2 LPQQALLKT 10
LP+Q +LKT
Sbjct: 442 LPRQVILKT 450


>sp|VF859_ASFWA|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 2 LPQQALLKT 10
LP+Q +LKT
Sbjct: 442 LPRQVILKT 450


>sp|VF859_ASFP4|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 2 LPQQALLKT 10
LP+Q +LKT
Sbjct: 442 LPRQVILKT 450


>sp|VF859_ASFM2|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 2 LPQQALLKT 10
LP+Q +LKT
Sbjct: 442 LPRQVILKT 450




6|SequenceR|35|26|HPQHVPLPQQ

>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12

Query: 3 QHVPLPQQ 10
QH+PLP++
Sbjct: 572 QHLPLPER 579


>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain

Query: 2 PQHVPLPQ 9
P+H P+P+
Sbjct: 667 PRHAPIPR 674


>sp|R1A_GLRV3|REPLICASE protein 1a|Grapevine leafroll-associated virus 3 (isolate

Query: 4 HVPLPQQ 10
HVPLP++
Sbjct: 174 HVPLPKK 180


>sp|R1AB_GLRV3|REPLICASE polyprotein 1ab|Grapevine leafroll-associated virus 3 (isolate

Query: 4 HVPLPQQ 10
HVPLP++
Sbjct: 174 HVPLPKK 180


>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)

Query: 2 PQHVPLPQ 9
P+H P+P+
Sbjct: 667 PRHAPIPR 674


>sp|CASP_SFAVA|EXECUTIONER caspase|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 2 PQHVPLPQ 9
P+HVP+ Q
Sbjct: 261 PKHVPIVQ 268


>sp|VG66_ICHVA|UNCHARACTERIZED protein ORF66|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 HPQHVPLPQ 9
HP+ +P+P+
Sbjct: 101 HPRRIPIPR 109


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 3 QHVPLPQ 9
QH+ LPQ
Sbjct: 963 QHIKLPQ 969


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3 QHVPLPQ 9
QH+ LPQ
Sbjct: 963 QHIKLPQ 969


>sp|RDRP_PAV|RNA-DIRECTED RNA polymerase|Pariacoto virus (PaV)

Query: 3 QHVPLPQQ 10
+H+PLP Q
Sbjct: 3 EHIPLPSQ 10


>sp|VG27_SHV21|UNCHARACTERIZED gene 27 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 HPQHVP 6
+PQHVP
Sbjct: 269 YPQHVP 274


>sp|TERM_ADECR|PRETERMINAL protein|Canine adenovirus serotype 1 (strain

Query: 3 QHVPLPQQ 10
QH PLP Q
Sbjct: 708 QHRPLPAQ 715


>sp|YO12_ADEG1|UNCHARACTERIZED protein ORF12|Fowl adenovirus A serotype 1

Query: 1 HPQHVP 6
HP+H+P
Sbjct: 132 HPEHLP 137


>sp|VP75_SHV21|PROBABLE membrane antigen 75|Saimiriine herpesvirus 2 (strain 11)

Query: 1 HPQHVPLPQ 9
H H+PLP+
Sbjct: 6 HGGHLPLPE 14


>sp|POL_CAMVE|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain BBC)

Query: 2 PQHVPLPQQ 10
P H PLP++
Sbjct: 536 PLHHPLPEE 544


>sp|POL_CAMVS|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain Strasbourg)

Query: 2 PQHVPLPQQ 10
P H PLP++
Sbjct: 536 PLHHPLPEE 544


>sp|POL_CAMVC|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain CM-1841)

Query: 2 PQHVPLPQQ 10
P H PLP++
Sbjct: 536 PLHHPLPEE 544


>sp|POL_CAMVN|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain NY8153)

Query: 2 PQHVPLPQQ 10
P H PLP++
Sbjct: 537 PLHHPLPEE 545


>sp|VE2_BPV1|REGULATORY protein E2|Bovine papillomavirus type 1

Query: 3 QHVPLP 8
+HVPLP
Sbjct: 391 KHVPLP 396




7|SequenceR|40|31|ESVLSHPQHV

>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 2 SVLSHPQH 9
+VL HP+H
Sbjct: 280 AVLHHPKH 287


>sp|YR821_MIMIV|UNCHARACTERIZED protein R821|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VLSHPQH 9
+L+HP+H
Sbjct: 396 ILTHPKH 402


>sp|VF179_IIV3|UNCHARACTERIZED protein 035R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 ESVLSHPQH 9
ES+L H QH
Sbjct: 476 ESILDHLQH 484


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 6 HPQHV 10
HPQH+
Sbjct: 2809 HPQHI 2813


>sp|L_SYNV|RNA-DIRECTED RNA polymerase L|Sonchus yellow net virus (SYNV)

Query: 2 SVLSHPQH 9
S L+HP H
Sbjct: 422 STLTHPDH 429


>sp|POL2_CNSV|RNA2 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 ESVLSHPQHV 10
E +LS+P H+
Sbjct: 773 EEILSYPLHL 782


>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 6 HPQHV 10
HPQH+
Sbjct: 72 HPQHI 76




8|SequenceR|45|36|KVTFGESVLS

>sp|RPOL_BPK11|DNA-DIRECTED RNA polymerase|Enterobacteria phage K11 (Bacteriophage K11)

Query: 1 KVTFGESVLS 10
KVT GESVL+
Sbjct: 631 KVTLGESVLA 640


>sp|Y252_SIRV1|UNCHARACTERIZED protein 252|Sulfolobus islandicus rod-shaped virus 1

Query: 1 KVTFGESVL 9
KVTF +S+L
Sbjct: 188 KVTFDKSIL 196




9|SequenceR|50|41|NKMMAKVTFG

***** No hits found ******


10|SequenceR|55|46|GRVVSNKMMA

***** No hits found ******


11|SequenceR|60|51|GAAPPGRVVS

>sp|VF155_IIV3|UNCHARACTERIZED protein 113L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 AAPPGRVVS 10
A PP RV+S
Sbjct: 55 ATPPSRVLS 63


>sp|YL442_MIMIV|UNCHARACTERIZED protein L442|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GAAPPGRVVS 10
GAAP G V+S
Sbjct: 427 GAAPAGSVLS 436


>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)

Query: 2 AAPPGRVV 9
A PPGR V
Sbjct: 1432 ATPPGREV 1439


>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)

Query: 2 AAPPGRVV 9
A PPGR V
Sbjct: 1432 ATPPGREV 1439


>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)

Query: 2 AAPPGRVV 9
A PPGR V
Sbjct: 1366 ATPPGREV 1373


>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 2 AAPPGRVV 9
A PPGR V
Sbjct: 1358 ATPPGREV 1365


>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 2 AAPPGRVV 9
A PPGR V
Sbjct: 1470 ATPPGREV 1477


>sp|POLG_PRSVH|GENOME polyprotein|Papaya ringspot virus (strain P

Query: 2 AAPPGRVV 9
A PPGR V
Sbjct: 1605 ATPPGREV 1612


>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 2 AAPPGRVV 9
A PPGR V
Sbjct: 1360 ATPPGREV 1367


>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus

Query: 2 AAPPGRVV 9
A PPGR V
Sbjct: 1346 ATPPGREV 1353


>sp|PG095_FOWPN|ENTRY-FUSION complex associated protein OPG095|Fowlpox virus (strain NVSL) (FPV)

Query: 2 AAPPGRVVS 10
+APPG++++
Sbjct: 137 SAPPGQIMT 145


>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)

Query: 1 GAAPPGRVVS 10
GA PPG+ V+
Sbjct: 960 GAVPPGKFVT 969


>sp|REP_TMOV|REPLICATION-ASSOCIATED protein|Tomato mottle virus (isolate Florida)

Query: 2 AAPPGRVVS 10
AAPP R VS
Sbjct: 209 AAPPDRPVS 217


>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)

Query: 1 GAAPPGRVVS 10
GA PPG+ V+
Sbjct: 960 GAVPPGKFVT 969


>sp|Y054_NPVOP|UNCHARACTERIZED 42.5 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 GAAPPGRVV 9
G APPG ++
Sbjct: 282 GGAPPGHLM 290


>sp|KR74_ICHVA|PROTEIN kinase ORF74|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 GAAPPGRVVS 10
GAAP RVVS
Sbjct: 422 GAAPAVRVVS 431


>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)

Query: 2 AAPPGRVVS 10
A PPGR V+
Sbjct: 8 ACPPGRTVT 16




12|SequenceR|65|56|REKFAGAAPP

>sp|TRX2_EHV2|TRIPLEX capsid protein 2|Equine herpesvirus 2 (strain 86/87)

Query: 4 FAGAAPP 10
FAG APP
Sbjct: 241 FAGVAPP 247


>sp|PR7L_MMTVG|PROTEIN PR73 5'-endogenous|Mouse mammary tumor virus (strain

Query: 1 REKFAGAAPP 10
RE+ A A PP
Sbjct: 256 RERLARARPP 265


>sp|PR7R_MMTVG|PROTEIN PR73 3'-endogenous|Mouse mammary tumor virus (strain

Query: 1 REKFAGAAPP 10
RE+ A A PP
Sbjct: 252 RERLARARPP 261


>sp|PR73_MMTVG|PROTEIN PR73|Mouse mammary tumor virus (strain

Query: 1 REKFAGAAPP 10
RE+ A A PP
Sbjct: 253 RERLARARPP 262


>sp|PR73_MMTVC|PROTEIN PR73|Mouse mammary tumor virus (strain

Query: 1 REKFAGAAPP 10
RE+ A A PP
Sbjct: 252 RERLARARPP 261


>sp|PR73_MMTVB|PROTEIN PR73|Mouse mammary tumor virus (strain

Query: 1 REKFAGAAPP 10
RE+ A A PP
Sbjct: 252 RERLARARPP 261


>sp|Y800_ATV|STRUCTURAL protein ORF800|Acidianus two-tailed virus (ATV)

Query: 1 REKFAGAAPP 10
R+ AGA PP
Sbjct: 714 RKHIAGARPP 723




13|SequenceR|70|61|TPKTPREKFA

>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 PKTPREKF 9
PKTP+ KF
Sbjct: 3342 PKTPKYKF 3349


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 PKTPREKF 9
PKTP+ KF
Sbjct: 3342 PKTPKYKF 3349


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 PKTPREKF 9
PKTP+ KF
Sbjct: 3336 PKTPKYKF 3343


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 PKTPREKF 9
PKTP+ KF
Sbjct: 3336 PKTPKYKF 3343


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 PKTPREKF 9
PKTP+ KF
Sbjct: 3330 PKTPKYKF 3337


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 PKTPREKF 9
PKTP+ KF
Sbjct: 3334 PKTPKYKF 3341


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 PKTPREKF 9
PKTP+ KF
Sbjct: 3330 PKTPKYKF 3337


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 PKTPREKF 9
PKTP+ KF
Sbjct: 3334 PKTPKYKF 3341


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 PKTPREKF 9
PKTP+ KF
Sbjct: 3359 PKTPKYKF 3366


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 PKTPREKF 9
PKTP+ KF
Sbjct: 3359 PKTPKYKF 3366


>sp|MTC3_PBCVC|MODIFICATION methylase CviBIII|Paramecium bursaria Chlorella virus NC1A

Query: 1 TPKTPREKF 9
TPKT REK
Sbjct: 30 TPKTVREKL 38


>sp|CEP3_HCMVM|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 TPKTPREK 8
TP+TPR+K
Sbjct: 163 TPRTPRQK 170


>sp|CEP3_HCMVA|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 TPKTPREK 8
TP+TPR+K
Sbjct: 163 TPRTPRQK 170


>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)

Query: 2 PKTPREKF 9
PK P+EKF
Sbjct: 862 PKAPQEKF 869


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 1 TPKTPRE 7
TPKTPR+
Sbjct: 950 TPKTPRQ 956


>sp|POL_MLVFP|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 1 TPKTPRE 7
TPKTPR+
Sbjct: 952 TPKTPRQ 958


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 1 TPKTPRE 7
TPKTPR+
Sbjct: 950 TPKTPRQ 956


>sp|POL_MLVMS|GAG-POL polyprotein|Moloney murine leukemia virus (isolate

Query: 1 TPKTPRE 7
TPKTPR+
Sbjct: 952 TPKTPRQ 958


>sp|POL_MLVF5|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 1 TPKTPRE 7
TPKTPR+
Sbjct: 953 TPKTPRQ 959


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 1 TPKTPRE 7
TPKTPR+
Sbjct: 950 TPKTPRQ 956


>sp|POL_MLVFF|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 1 TPKTPRE 7
TPKTPR+
Sbjct: 952 TPKTPRQ 958


>sp|POL_MLVRD|GAG-POL polyprotein|Radiation murine leukemia virus

Query: 1 TPKTPRE 7
TPKTPR+
Sbjct: 951 TPKTPRQ 957


>sp|POL_MLVAV|GAG-POL polyprotein|AKV murine leukemia virus (AKR

Query: 1 TPKTPRE 7
TPKTPR+
Sbjct: 951 TPKTPRQ 957


>sp|RNB_HHV11|ACCESSORY factor US11|Human herpesvirus 1 (strain 17)

Query: 1 TPKTPRE 7
TP+TPRE
Sbjct: 147 TPRTPRE 153




14|SequenceR|75|66|FKRFATPKTP

>sp|PG068_VARV|PROTEIN OPG068|Variola virus

Query: 1 FKRFATPKTP 10
F RF+T K P
Sbjct: 498 FVRFSTDKNP 507


>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 FKRFATPKTP 10
F RF+T K P
Sbjct: 498 FVRFSTDKNP 507


>sp|PG068_VACCW|PROTEIN OPG068|Vaccinia virus (strain Western Reserve)

Query: 1 FKRFATPKTP 10
F RF+T K P
Sbjct: 498 FVRFSTDKNP 507


>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FKRFATPKTP 10
F RF+T K P
Sbjct: 498 FVRFSTDKNP 507


>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)

Query: 1 FKRFATPKTP 10
F RF+T K P
Sbjct: 498 FVRFSTDKNP 507


>sp|YR659_MIMIV|PUTATIVE EGF-like domain-containing protein R659|Acanthamoeba polyphaga

Query: 1 FKRFATPKT 9
+++FATP T
Sbjct: 107 YEQFATPDT 115


>sp|DPOL_GAHVM|DNA polymerase catalytic subunit|Gallid herpesvirus 2 (strain

Query: 2 KRFATPKT 9
KRF TP T
Sbjct: 223 KRFCTPVT 230




15|SequenceR|80|71|DGREYFKRFA

>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 1 DGREYFKRF 9
D R++FK F
Sbjct: 2289 DARDFFKSF 2297


>sp|HELI_NPVAC|DNA replication helicase|Autographa californica nuclear polyhedrosis

Query: 1 DGREYFKRF 9
+G YFKRF
Sbjct: 876 EGYLYFKRF 884


>sp|DPOL_BPSP1|DNA polymerase|Bacillus phage SP01 (Bacteriophage SP01)

Query: 3 REYFKRF 9
++YFKRF
Sbjct: 724 KKYFKRF 730


>sp|U4_FBNY1|PROTEIN U4|Faba bean necrotic yellows virus

Query: 4 EYFKRF 9
EYF+RF
Sbjct: 92 EYFRRF 97




16|SequenceR|85|76|LAIPFDGREY

>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)

Query: 1 LAIPFDGR 8
L +PFDGR
Sbjct: 1757 LTLPFDGR 1764


>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)

Query: 1 LAIPFDGR 8
L +PFDGR
Sbjct: 1757 LTLPFDGR 1764


>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)

Query: 1 LAIPFDGR 8
L +PFDGR
Sbjct: 1757 LTLPFDGR 1764


>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)

Query: 1 LAIPFDGR 8
L +PFDGR
Sbjct: 1757 LTLPFDGR 1764


>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)

Query: 1 LAIPFDGR 8
L +PFDGR
Sbjct: 1757 LTLPFDGR 1764


>sp|CAPSD_HASV|CAPSID protein|Helicoverpa armigera stunt virus (HaSV)

Query: 1 LAIPFDGREY 10
+++P DGR++
Sbjct: 144 VSVPLDGRQW 153


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 1 LAIPFDGREY 10
+ +P DG EY
Sbjct: 651 IPVPVDGMEY 660


>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 1 LAIPFDGREY 10
+ +P DG EY
Sbjct: 651 IPVPVDGMEY 660


>sp|HEMA_RINDL|HEMAGGLUTININ glycoprotein|Rinderpest virus (strain L) (RDV)

Query: 1 LAIPFDGREY 10
L P DG EY
Sbjct: 443 LYTPLDGNEY 452


>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 1 LAIPFD 6
LAIPFD
Sbjct: 1527 LAIPFD 1532


>sp|CVC2_ILTVT|CAPSID vertex component 2|Infectious laryngotracheitis virus (strain

Query: 4 PFDGREY 10
P DGR+Y
Sbjct: 303 PIDGRKY 309


>sp|Y387_ATV|STRUCTURAL protein ORF387|Acidianus two-tailed virus (ATV)

Query: 4 PFDGREY 10
P DGRE+
Sbjct: 148 PIDGREW 154


>sp|VG67_ICHVA|UNCHARACTERIZED protein ORF67|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 LAIPFDGREY 10
L + DGRE+
Sbjct: 826 LVVTIDGREF 835




17|SequenceR|90|81|KSDHELAIPF

>sp|PRIM_SHV21|DNA primase|Saimiriine herpesvirus 2 (strain 11)

Query: 3 DHELAIPF 10
D ELAIPF
Sbjct: 80 DTELAIPF 87


>sp|VP2_BTV1V|OUTER capsid protein VP2|Bluetongue virus 1 (isolate South

Query: 1 KSDHELAI 8
K+DHEL I
Sbjct: 655 KADHELEI 662




18|SequenceR|95|86|AIKNGKSDHE

>sp|RLIG_ASFB7|PUTATIVE RNA-ligase|African swine fever virus (strain

Query: 1 AIKNGKSDHE 10
AIKNGK D E
Sbjct: 295 AIKNGKKDKE 304


>sp|VF448_ASFM2|PUTATIVE RNA-ligase|African swine fever virus (isolate

Query: 1 AIKNGKSD 8
AIKNGK D
Sbjct: 293 AIKNGKKD 300


>sp|RLIG_ASFK5|PUTATIVE RNA-ligase|African swine fever virus (isolate

Query: 1 AIKNGKSDHE 10
AIKNGK + E
Sbjct: 295 AIKNGKKEKE 304


>sp|VF448_ASFWA|UNCHARACTERIZED protein M448R|African swine fever virus (isolate

Query: 1 AIKNGKSD 8
AIKNGK D
Sbjct: 295 AIKNGKKD 302


>sp|VF448_ASFP4|PUTATIVE RNA-ligase|African swine fever virus (isolate

Query: 1 AIKNGKSD 8
AIKNGK D
Sbjct: 295 AIKNGKKD 302


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 AIKNGKSDH 9
A+KNGK+ H
Sbjct: 963 AVKNGKAIH 971


>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I74A2|HEMAGGLUTININ A virus (strain A/Duck/Memphis/928/1974

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I76A3|HEMAGGLUTININ A virus (strain A/Duck/Alberta/78/1976

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I63A2|HEMAGGLUTININ A virus (strain A/Equine/Miami/1/1963

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 495 SIRNGTYDHD 504


>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I63A4|HEMAGGLUTININ A virus (strain A/Equine/Uruguay/1/1963

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 495 SIRNGTYDHD 504


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 AIKNGKSDH 9
IK G++DH
Sbjct: 2535 GIKRGETDH 2543


>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I80A6|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/8/1980

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 AIKNGKSDH 9
IK G++DH
Sbjct: 2532 GIKRGETDH 2540


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 AIKNGKSDH 9
IK G++DH
Sbjct: 2535 GIKRGETDH 2543


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 AIKNGKSDH 9
IK G++DH
Sbjct: 2535 GIKRGETDH 2543


>sp|HEMA_I85A1|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/9/1985

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489


>sp|HEMA_I76AC|HEMAGGLUTININ A virus (strain A/Goose/Hong

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489


>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I72A0|HEMAGGLUTININ A virus (strain A/Equine/Algiers/1972

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 495 SIRNGTYDHD 504


>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 495 SIRNGTYDHD 504


>sp|HEMA_I68A3|HEMAGGLUTININ A virus (strain A/Turkey/Ontario/6118/1968

Query: 1 AIKNGKSDHE 10
IKNG DH+
Sbjct: 494 TIKNGTYDHK 503


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 AIKNGKSDH 9
IK G++DH
Sbjct: 2535 GIKRGETDH 2543


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 1 AIKNGKSDH 9
IK G++DH
Sbjct: 2535 GIKRGETDH 2543


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 AIKNGKSDH 9
IK G++DH
Sbjct: 2535 GIKRGETDH 2543


>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I77A6|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/5/1977

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489


>sp|HEMA_I85A2|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/10/1985

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489


>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I76AD|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489


>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I80A7|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/33/1980

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489


>sp|HEMA_I77A7|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489


>sp|HEMA_I82A5|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/7/1982

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489


>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489


>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489


>sp|HEMA_I63A3|HEMAGGLUTININ A virus (strain A/Duck/Ukraine/1/1963

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489


>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I82A6|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/21/1982

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489


>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489


>sp|HEMA_I80A8|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/833/1980

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 494 SIRNGTYDHD 503


>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 497 SIRNGTYDHD 506


>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505


>sp|HEMA_I85A7|HEMAGGLUTININ A virus (strain A/Ruddy

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 494 SIRNGTYDHD 503


>sp|HEMA_I82A3|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/133/1982

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 494 SIRNGTYDHD 503


>sp|HEMA_I77AG|HEMAGGLUTININ A virus (strain A/Budgerigar/Hokkaido/1/1977

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 494 SIRNGTYDHD 503


>sp|HEMA_I76A1|HEMAGGLUTININ A virus (strain A/Duck/Alberta/28/1976

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 494 SIRNGTYDHD 503


>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489


>sp|HEMA_I75A4|HEMAGGLUTININ A virus (strain A/Chicken/Alabama/1/1975

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 494 SIRNGTYDHD 503


>sp|HEMA_I76AK|HEMAGGLUTININ A virus (strain A/Duck/New

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 494 SIRNGTYDHD 503


>sp|HEMA_I56A1|HEMAGGLUTININ A virus (strain A/Duck/Czechoslovakia/1956

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 494 SIRNGTYDHD 503


>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 1 AIKNGKSDHE 10
AIKNGK+ +
Sbjct: 1388 AIKNGKNRQD 1397


>sp|ENLYS_BPM10|PSEUDOMUREIN endoisopeptidase PeiW|Methanothermobacter phage psiM100

Query: 2 IKNGKSDH 9
++ GKSDH
Sbjct: 101 LEQGKSDH 108


>sp|HEMA_I79A7|HEMAGGLUTININ A virus (strain A/Grey

Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 494 SIRNGTYDHD 503




19|SequenceR|100|91|IEVKWAIKNG

>sp|YL023_MIMIV|PUTATIVE ankyrin repeat protein L23|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VKWAIKNG 10
VKWA KNG
Sbjct: 123 VKWASKNG 130


Query: 3 VKWAIKNG 10
VKWA NG
Sbjct: 183 VKWASSNG 190


Query: 3 VKWAIKNG 10
V+WA +NG
Sbjct: 153 VRWASENG 160


>sp|YR267_MIMIV|PUTATIVE ankyrin repeat protein R267|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VKWAIKNG 10
++WA+KNG
Sbjct: 139 IRWAVKNG 146


>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain

Query: 2 EVKWAIKNG 10
EVK+ IKNG
Sbjct: 151 EVKFLIKNG 159


>sp|YR896_MIMIV|PUTATIVE ankyrin repeat protein R896|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VKWAIKNG 10
+ WA KNG
Sbjct: 224 ITWACKNG 231


>sp|YR845_MIMIV|PUTATIVE ankyrin repeat protein R845|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VKWAIKNG 10
V+WA KNG
Sbjct: 110 VRWASKNG 117


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 IEVKWAIKN 9
IEV WA N
Sbjct: 1416 IEVNWAFDN 1424


>sp|POL1_BAMMN|GENOME polyprotein 1|Barley mild mosaic virus (strain

Query: 4 KWAIKNG 10
+WAIK+G
Sbjct: 2185 QWAIKHG 2191


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 4 KWAIKNG 10
+WA++NG
Sbjct: 3243 EWALRNG 3249


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 4 KWAIKNG 10
+WA++NG
Sbjct: 3243 EWALRNG 3249


>sp|YL025_MIMIV|PUTATIVE ankyrin repeat protein L25|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VKWAIKNG 10
+KWA KNG
Sbjct: 101 LKWASKNG 108


>sp|YL062_MIMIV|PUTATIVE ankyrin repeat protein L62|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VKWAIKNG 10
V+WA +NG
Sbjct: 200 VRWASRNG 207


>sp|YR911_MIMIV|PUTATIVE ankyrin repeat protein R911|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VKWAIKNG 10
V+WA KNG
Sbjct: 294 VEWASKNG 301


Query: 3 VKWAIKNG 10
VKWA +NG
Sbjct: 414 VKWASENG 421


Query: 3 VKWAIKNG 10
V+WA +NG
Sbjct: 324 VRWASRNG 331


Query: 3 VKWAIKNG 10
V+WA +NG
Sbjct: 384 VRWASRNG 391


>sp|VP2_AHSV3|OUTER capsid protein VP2|African horse sickness virus 3

Query: 3 VKWAIKN 9
V+WA+KN
Sbjct: 987 VEWAMKN 993


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 2 EVKWAIKNG 10
+VKW+ ++G
Sbjct: 149 QVKWSARDG 157


>sp|YL014_MIMIV|PUTATIVE ankyrin repeat protein L14|Acanthamoeba polyphaga mimivirus

Query: 3 VKWAIKNG 10
V+WA +NG
Sbjct: 84 VRWASRNG 91


>sp|MUNS_REOVL|PROTEIN mu-NS|Reovirus type 1 (strain Lang)

Query: 3 VKWAIKNG 10
+KW +K+G
Sbjct: 365 LKWVVKHG 372


>sp|MUNS_REOVD|PROTEIN mu-NS|Reovirus type 3 (strain Dearing)

Query: 3 VKWAIKNG 10
+KW +K+G
Sbjct: 365 LKWVVKHG 372


>sp|YR760_MIMIV|PUTATIVE ankyrin repeat protein R760|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VKWAIKNG 10
V+WA +NG
Sbjct: 448 VEWATENG 455


>sp|YL099_MIMIV|PUTATIVE ankyrin repeat protein L99|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VKWAIKNG 10
VK+ IKNG
Sbjct: 98 VKYLIKNG 105


>sp|CVC2_ILTVT|CAPSID vertex component 2|Infectious laryngotracheitis virus (strain

Query: 3 VKWAIKNG 10
V W +KNG
Sbjct: 140 VIWIVKNG 147


>sp|YL063_MIMIV|PUTATIVE ankyrin repeat protein L63|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VKWAIKNG 10
V+WA +NG
Sbjct: 495 VRWASRNG 502


>sp|YL483_MIMIV|PUTATIVE ankyrin repeat protein L483|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VKWAIKNG 10
V+WA +NG
Sbjct: 173 VRWASRNG 180


>sp|YR875_MIMIV|PUTATIVE ankyrin repeat protein R875|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 EVKWAIKNG 10
E+ WA +NG
Sbjct: 171 EINWASQNG 179


>sp|YR863_MIMIV|PUTATIVE ankyrin repeat protein R863|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VKWAIKNG 10
V+WA +NG
Sbjct: 180 VRWASRNG 187




20|SequenceR|105|96|YDLKEIEVKW

>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 1 YDLKEIEVKW 10
YD+ E+ V W
Sbjct: 888 YDVPEVSVDW 897


>sp|Y094_AFV1Y|UNCHARACTERIZED protein ORF94|Acidianus filamentous virus 1 (isolate

Query: 1 YDLKEIE 7
YDLKEIE
Sbjct: 75 YDLKEIE 81


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 1 YDLKEIEVK 9
Y LKE EVK
Sbjct: 540 YSLKEKEVK 548


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 1 YDLKEIEVK 9
Y LKE EVK
Sbjct: 540 YSLKEKEVK 548


>sp|YR225_MIMIV|PUTATIVE BTB/POZ domain-containing protein R225|Acanthamoeba polyphaga

Query: 1 YDLKEIEVKW 10
YD+K I+V W
Sbjct: 326 YDVKTIKVCW 335


>sp|ESTE_SFAVA|PUTATIVE esterase|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 1 YDLKEI 6
YDLKEI
Sbjct: 354 YDLKEI 359


>sp|FPS_AVISP|TYROSINE-PROTEIN kinase transforming protein Fps|Avian sarcoma virus (strain PRCII)

Query: 3 LKEIEVKW 10
+K+I VKW
Sbjct: 430 MKQIPVKW 437


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 532 YSLKEKEIK 540


>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)

Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 532 YSLKEKEIK 540


>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)

Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 532 YSLKEKEIK 540


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 532 YSLKEKEIK 540


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 548 YSLKEKEIK 556


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 548 YSLKEKEIK 556


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 549 YSLKEKEIK 557


>sp|L_SV41|RNA-DIRECTED RNA polymerase L|Simian virus 41 (SV41)

Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 550 YSLKEKEIK 558


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 550 YSLKEKEIK 558


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 550 YSLKEKEIK 558


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 550 YSLKEKEIK 558




21|SequenceR|110|101|PLYHHYDLKE

>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 PLYHHYD 7
P+YHH D
Sbjct: 1762 PIYHHID 1768


>sp|Y021_NPVAC|UNCHARACTERIZED 36.6 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 2 LYHHYDLK 9
LY HYDL+
Sbjct: 137 LYRHYDLE 144


>sp|SPIKE_WBV24|SPIKE glycoprotein|White bream virus (isolate Blicca

Query: 2 LYHHYDLK 9
L+H+Y+LK
Sbjct: 341 LFHYYNLK 348


>sp|L_MOBVC|RNA-DIRECTED RNA polymerase L|Mobala mammarenavirus (isolate Rat/Central African

Query: 3 YHHYDLKE 10
YHH DL E
Sbjct: 648 YHHKDLLE 655


>sp|YR367_MIMIV|UNCHARACTERIZED protein R367|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 YHHYDLK 9
YH YD+K
Sbjct: 160 YHTYDIK 166


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 YHHYDL 8
YHH DL
Sbjct: 769 YHHRDL 774


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1762 PIHHHID 1768


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1596 PIHHHID 1602


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1762 PIHHHID 1768


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1762 PIHHHID 1768


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1760 PIHHHID 1766


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1762 PIHHHID 1768


>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1765 PIHHHID 1771


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1762 PIHHHID 1768


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1763 PIHHHID 1769


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1763 PIHHHID 1769


>sp|OE66_NPVLS|OCCLUSION-DERIVED virus envelope protein E66|Leucania separata nucleopolyhedrovirus

Query: 2 LYHHYDLKE 10
L HYDL+E
Sbjct: 135 LRDHYDLRE 143


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra

Query: 3 YHHYDL 8
YHH DL
Sbjct: 652 YHHKDL 657


>sp|UL13_GAHVM|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 3 YHHYDLKE 10
Y H DLKE
Sbjct: 139 YSHIDLKE 146




22|SequenceR|115|106|GDFFLPLYHH

>sp|VF022_IIV3|PUTATIVE helicase 087L|Invertebrate iridescent virus 3 (IIV-3)

Query: 4 FLPLYH 9
FLPLYH
Sbjct: 8 FLPLYH 13


>sp|VG88_BPML5|GENE 88 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 GDFFLPLY 8
GDFF P Y
Sbjct: 114 GDFFSPTY 121


>sp|VG88_BPMD2|GENE 88 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 GDFFLPLY 8
GDFF P Y
Sbjct: 114 GDFFSPTY 121


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 4 FLPLYHH 10
FLPLY H
Sbjct: 1181 FLPLYAH 1187


>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P

Query: 1 GDFFLPLYH 9
DFF PL H
Sbjct: 119 ADFFQPLSH 127


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 4 FLPLYHH 10
FLPLY H
Sbjct: 1181 FLPLYAH 1187


>sp|V155_FOWPN|PUTATIVE ankyrin repeat protein FPV115|Fowlpox virus (strain NVSL) (FPV)

Query: 2 DFFLPLYH 9
D LPLYH
Sbjct: 157 DGLLPLYH 164


>sp|CAPSD_BMV|CAPSID protein|Brome mosaic virus (BMV)

Query: 2 DFFLPLY 8
DFF P+Y
Sbjct: 182 DFFTPVY 188


>sp|RDRP_AMV|RNA-DIRECTED RNA polymerase 2a|Alfalfa mosaic virus (AMV)

Query: 2 DFFLPLYH 9
D FLPL+H
Sbjct: 298 DEFLPLHH 305


>sp|VME1_WBV24|MEMBRANE protein|White bream virus (isolate Blicca

Query: 3 FFLPLYHH 10
FF+ LY+H
Sbjct: 121 FFITLYYH 128


>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)

Query: 1 GDFFLPLYHH 10
GD+F PL H
Sbjct: 952 GDYFYPLPVH 961


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 3 FFLPLYHH 10
F LP HH
Sbjct: 700 FLLPFTHH 707


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 3 FFLPLYHH 10
F LP HH
Sbjct: 700 FLLPFTHH 707


>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 4 FLPLYH 9
F PLYH
Sbjct: 483 FAPLYH 488


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484


>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)

Query: 1 GDFFLPLY 8
G F LP+Y
Sbjct: 530 GGFMLPIY 537


>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)

Query: 1 GDFFLPLY 8
G F LP+Y
Sbjct: 531 GGFMLPIY 538


>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)

Query: 1 GDFFLPLY 8
G F LP+Y
Sbjct: 531 GGFMLPIY 538


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484


>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)

Query: 1 GDFFLPLY 8
G F LP+Y
Sbjct: 361 GGFMLPIY 368


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484


>sp|PAP1_YLDV|POLY(A) polymerase catalytic subunit|Yaba-like disease virus (YLDV)

Query: 1 GDFFLPL 7
GDF +PL
Sbjct: 424 GDFLIPL 430


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484


>sp|POLG_HAVSC|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484


>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484


>sp|YR302_MIMIV|UNCHARACTERIZED protein R302|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 FFLPLYH 9
FFL +YH
Sbjct: 2 FFLTIYH 8


>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 FLPLYH 9
F PLYH
Sbjct: 458 FAPLYH 463


>sp|EA31_LAMBD|PROTEIN ea31|Escherichia phage lambda (Bacteriophage lambda)

Query: 2 DFFLPLYHH 10
D FLP+ H+
Sbjct: 121 DHFLPIAHY 129




23|SequenceR|120|111|TMECLGDFFL

>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 TMECLGDF 8
T+ CLGDF
Sbjct: 3357 TLTCLGDF 3364


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 TMECLGDF 8
T+ CLGDF
Sbjct: 3386 TLTCLGDF 3393


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 TMECLGDF 8
T+ CLGDF
Sbjct: 3387 TLTCLGDF 3394


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 TMECLGDF 8
T+ CLGDF
Sbjct: 3387 TLTCLGDF 3394


>sp|SPI1_SWPVK|PROBABLE serine proteinase inhibitor 1|Swinepox virus (strain Kasza)

Query: 2 MECLGDFFL 10
M+C+GD F+
Sbjct: 71 MDCIGDMFV 79


>sp|POL2_TOTV|RNA2 polyprotein|Tomato torrado virus (isolate Solanum

Query: 1 TMECLG 6
TMECLG
Sbjct: 162 TMECLG 167


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 TMECLGD 7
TMECL D
Sbjct: 3075 TMECLKD 3081


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 TMECLGD 7
TMECL D
Sbjct: 3078 TMECLKD 3084


>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 MECLGDFF 9
+ C GDFF
Sbjct: 372 LNCGGDFF 379


>sp|US03_BHV1S|SERINE/THREONINE-PROTEIN kinase US3 homolog|Bovine herpesvirus 1.2 (strain ST)

Query: 4 CLGDF 8
CLGDF
Sbjct: 294 CLGDF 298


>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 4 CLGDFF 9
C+G+FF
Sbjct: 378 CMGEFF 383


>sp|US03_CHV9D|SERINE/THREONINE-PROTEIN kinase US3 homolog|Cercopithecine herpesvirus 9 (strain DHV)

Query: 4 CLGDF 8
CLGDF
Sbjct: 177 CLGDF 181


>sp|1A_PZSVT|REPLICATION protein 1a|Pelargonium zonate spot virus (isolate

Query: 1 TMECLGDF 8
T+ECL F
Sbjct: 91 TLECLSSF 98




24|SequenceR|125|116|FEYPFTMECL

>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 3 YPFTMECL 10
YPF ++CL
Sbjct: 2066 YPFPIDCL 2073


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 3 YPFTMECL 10
YPF ++CL
Sbjct: 2066 YPFPIDCL 2073


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 3 YPFTMECL 10
YPF ++CL
Sbjct: 2066 YPFPIDCL 2073


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 3 YPFTMECL 10
YPF ++CL
Sbjct: 2066 YPFPIDCL 2073


>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)

Query: 3 YPFTMECL 10
YP T+EC+
Sbjct: 636 YPVTVECV 643


>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)

Query: 3 YPFTMECL 10
YP T+EC+
Sbjct: 636 YPVTVECV 643


>sp|MVP_TUMVQ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Quebec)

Query: 3 YPFTMECL 10
YP T+EC+
Sbjct: 636 YPVTVECV 643


>sp|MVP_TUMVJ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Japanese)

Query: 3 YPFTMECL 10
YP T+EC+
Sbjct: 636 YPVTVECV 643


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 4 PFTMECL 10
PFT++CL
Sbjct: 942 PFTLQCL 948


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 1 FEYPFTMECL 10
F YPF CL
Sbjct: 1267 FSYPFGHWCL 1276


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 1 FEYPFTMECL 10
F YPF CL
Sbjct: 1267 FSYPFGHWCL 1276


>sp|YR337_MIMIV|UNCHARACTERIZED cullin-like protein R337|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 EYPFTMEC 9
+YP +EC
Sbjct: 55 QYPLELEC 62


>sp|GG_EHV4|ENVELOPE glycoprotein G|Equine herpesvirus 4 (strain 1942)

Query: 2 EYPFTMEC 9
+YP TM+C
Sbjct: 241 DYPNTMDC 248


>sp|5054R_ASFP4|PROTEIN MGF 505-4R|African swine fever virus (isolate

Query: 4 PFTMECL 10
PF +ECL
Sbjct: 473 PFVLECL 479


>sp|5054R_ASFWA|PROTEIN MGF 505-4R|African swine fever virus (isolate

Query: 4 PFTMECL 10
PF +ECL
Sbjct: 473 PFVLECL 479


>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)

Query: 1 FEYPFTME 8
FEYP T E
Sbjct: 429 FEYPLTKE 436


>sp|PG064_VACCW|PROTEIN OPG064|Vaccinia virus (strain Western Reserve)

Query: 1 FEYPFTME 8
FEYP T E
Sbjct: 429 FEYPLTKE 436


>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FEYPFTME 8
FEYP T E
Sbjct: 429 FEYPLTKE 436


>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 FEYPFTME 8
FEYP T E
Sbjct: 429 FEYPLTKE 436


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 3 YPFTMEC 9
YPF ++C
Sbjct: 2066 YPFPIDC 2072


>sp|POL2_TOTV|RNA2 polyprotein|Tomato torrado virus (isolate Solanum

Query: 3 YPFTMECL 10
+ +TMECL
Sbjct: 159 FYYTMECL 166


>sp|G3P_BPIF1|ATTACHMENT protein G3P|Escherichia phage If1 (Bacteriophage If1)

Query: 2 EYPFTMEC 9
EY F +EC
Sbjct: 418 EYEFIIEC 425


>sp|5054R_ASFM2|PROTEIN MGF 505-4R|African swine fever virus (isolate

Query: 4 PFTMECL 10
PF +ECL
Sbjct: 478 PFLLECL 484


>sp|5054R_ASFB7|PROTEIN MGF 505-4R|African swine fever virus (strain

Query: 4 PFTMECL 10
PF +ECL
Sbjct: 477 PFLLECL 483


>sp|POLN_TYMVA|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 1 FEYPFTMEC 9
F+ PF++ C
Sbjct: 1378 FDRPFSLSC 1386


>sp|POLN_TYMVC|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 1 FEYPFTMEC 9
F+ PF++ C
Sbjct: 1378 FDRPFSLSC 1386


>sp|YR626_MIMIV|UNCHARACTERIZED protein R626|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 EYPFTMEC 9
EYPF+ C
Sbjct: 275 EYPFSQIC 282


>sp|POLN_TYMV|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus

Query: 1 FEYPFTMEC 9
F+ PF++ C
Sbjct: 1378 FDRPFSLSC 1386


>sp|POLN_KYMVJ|NON-STRUCTURAL replication polyprotein|Kennedya yellow mosaic virus (strain

Query: 1 FEYPFTMEC 9
F+ PF++ C
Sbjct: 1408 FDRPFSLSC 1416




25|SequenceR|130|121|GQRAFFEYPF

>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)

Query: 1 GQRAFFEYP 9
G R+F+ YP
Sbjct: 363 GSRSFYVYP 371


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank

Query: 3 RAFFEYPF 10
R FFE PF
Sbjct: 645 RKFFERPF 652


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 3 RAFFEYPF 10
R FFE PF
Sbjct: 645 RKFFERPF 652


>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)

Query: 1 GQRAFFEYP 9
G R+F+ YP
Sbjct: 364 GMRSFYVYP 372


>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)

Query: 1 GQRAFFEYP 9
G R+F+ YP
Sbjct: 362 GTRSFYVYP 370


>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)

Query: 1 GQRAFFEYP 9
G R+F+ YP
Sbjct: 365 GTRSFYVYP 373


>sp|044L_IIV3|PUTATIVE serine/threonine-protein kinase 040L|Invertebrate iridescent virus

Query: 4 AFFEYPF 10
+F EYPF
Sbjct: 269 SFMEYPF 275




26|SequenceR|135|126|LMDHIGQRAF

>sp|POL_FFV|PRO-POL polyprotein|Feline foamy virus (FFV) (Feline

Query: 1 LMDHIGQR 8
++DH+GQR
Sbjct: 1105 IVDHLGQR 1112


>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65

Query: 3 DHIGQRAF 10
DH G+RA+
Sbjct: 162 DHTGERAY 169


>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4

Query: 3 DHIGQRAF 10
DH G+RA+
Sbjct: 162 DHTGERAY 169


>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3

Query: 1 LMDHIGQR 8
++DH+G R
Sbjct: 1104 ILDHLGNR 1111


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 1 LMDHIGQR 8
++DH+G R
Sbjct: 1104 ILDHLGNR 1111




27|SequenceR|140|131|NGGHELMDHI

>sp|TOP2_IIV3|DNA topoisomerase 2|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 NGGHELMDHI 10
NGGHEL +I
Sbjct: 77 NGGHELCKNI 86


>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)

Query: 1 NGGHELMD 8
NG H LMD
Sbjct: 288 NGPHSLMD 295


>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant

Query: 1 NGGHELMD 8
NG H LMD
Sbjct: 288 NGPHSLMD 295


>sp|VL2_COPV6|MINOR capsid protein L2|Canine oral papillomavirus (strain Y62)

Query: 1 NGGHELMDHI 10
+GGH + +HI
Sbjct: 219 SGGHSIGEHI 228


>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)

Query: 2 GGHELMDH 9
HE++DH
Sbjct: 1059 AAHEILDH 1066


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 2 GGHELMDH 9
HE++DH
Sbjct: 1059 AAHEILDH 1066


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 2 GGHELMDH 9
HE++DH
Sbjct: 1059 AAHEILDH 1066


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2 GGHELMDH 9
HE++DH
Sbjct: 1059 AAHEILDH 1066


>sp|ICP27_PSHV1|MRNA export factor|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 GHELMDH 9
GH+++DH
Sbjct: 576 GHKIVDH 582


>sp|EXON_IIV6|PUTATIVE exonuclease 012L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 GGHELMDHI 10
G H+L+D+I
Sbjct: 209 GEHKLLDYI 217


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 1 NGGHELMD 8
NG H+L D
Sbjct: 1531 NGSHQLAD 1538


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 3 GHELMDHI 10
H+L DHI
Sbjct: 4526 AHQLKDHI 4533


>sp|DNBI_TUHV2|MAJOR DNA-binding protein|Tupaiid herpesvirus (strain 2) (TuHV-2)

Query: 1 NGGHELMDHI 10
NGG L +H+
Sbjct: 457 NGGSALYEHL 466


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 2 GGHELMDHI 10
GG + DHI
Sbjct: 2434 GGESISDHI 2442




28|SequenceR|145|136|VPLIKNGGHE

>sp|G1P_BPIF1|GENE 1 protein|Escherichia phage If1 (Bacteriophage If1)

Query: 1 VPLIKNGGHE 10
V LIK+G HE
Sbjct: 340 VELIKDGKHE 349


>sp|YR811_MIMIV|PUTATIVE ariadne-like RING finger protein|Acanthamoeba polyphaga mimivirus

Query: 1 VPLIKNGG 8
+P+IK+GG
Sbjct: 937 IPIIKDGG 944


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2738 VPLSRNSNHE 2747


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2738 VPLSRNSNHE 2747


>sp|DEPOL_BPKN1|DEPOLYMERASE, capsule KN1-specific|Klebsiella phage KN1-1 (Bacteriophage KN1-1)

Query: 1 VPLIKNGGHE 10
VP+I +GG+E
Sbjct: 267 VPVILSGGYE 276


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2725 VPLCRNSTHE 2734


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2729 VPLSRNSNHE 2738


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2727 VPLSRNSTHE 2736


>sp|CVC1_GAHVM|CAPSID vertex component 1|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 VPLIKNGG 8
VP+I NGG
Sbjct: 623 VPIILNGG 630


>sp|NS1_HRSVB|NON-STRUCTURAL protein 1|Human respiratory syncytial virus B

Query: 1 VPLIKNGGH 9
+P+++NGG+
Sbjct: 80 MPILQNGGY 88


>sp|NS1_HRSV1|NON-STRUCTURAL protein 1|Human respiratory syncytial virus B

Query: 1 VPLIKNGGH 9
+P+++NGG+
Sbjct: 80 MPILQNGGY 88


>sp|NS1_BRSVA|NON-STRUCTURAL protein 1|Bovine respiratory syncytial virus (strain

Query: 1 VPLIKNGGH 9
+P+++NGG+
Sbjct: 80 MPILQNGGY 88


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2729 VPLSRNSTHE 2738


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2729 VPLSRNSTHE 2738


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2729 VPLSRNSTHE 2738


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2733 VPLSRNSTHE 2742


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2732 VPLSRNSTHE 2741


>sp|YL684_MIMIV|UNCHARACTERIZED protein L684|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PLIKNGGHE 10
P+IKN G E
Sbjct: 25 PIIKNNGLE 33


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 2 PLIKNGGH 9
PL+ NG H
Sbjct: 1058 PLVPNGDH 1065


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 2 PLIKNGGH 9
PL+ NG H
Sbjct: 1058 PLVPNGDH 1065


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 2 PLIKNGGH 9
P++ +GGH
Sbjct: 192 PIVTHGGH 199


>sp|YL176_MIMIV|UNCHARACTERIZED protein L176|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VPLIKNG 7
VPLIK+G
Sbjct: 110 VPLIKSG 116


>sp|SPIKE_ADECR|FIBER protein|Canine adenovirus serotype 1 (strain

Query: 2 PLIKNGGH 9
PLIKN H
Sbjct: 284 PLIKNNNH 291


>sp|SPIKE_ADECG|FIBER protein|Canine adenovirus serotype 1 (strain

Query: 2 PLIKNGGH 9
PLIKN H
Sbjct: 284 PLIKNNNH 291


>sp|SPIKE_ADECC|FIBER protein|Canine adenovirus serotype 1 (strain

Query: 2 PLIKNGGH 9
PLIKN H
Sbjct: 284 PLIKNNNH 291


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1 VPLIKNGGHE 10
+PL +N HE
Sbjct: 2736 LPLSRNSNHE 2745


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1 VPLIKNGGHE 10
+PL +N HE
Sbjct: 2736 LPLSRNSNHE 2745


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1 VPLIKNGGHE 10
+PL +N HE
Sbjct: 2736 LPLSRNSNHE 2745


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1 VPLIKNGGHE 10
+PL +N HE
Sbjct: 2736 LPLSRNSNHE 2745


>sp|NCAP_OLVVA|NUCLEOPROTEIN mammarenavirus (isolate Mouse/Argentina/RIID 3229/1990)

Query: 2 PLIKNGGH 9
P +KNGG+
Sbjct: 343 PPVKNGGN 350


>sp|PHOSP_CHAV|PHOSPHOPROTEIN virus (strain I653514) (CHPV)

Query: 2 PLIKNGGHE 10
P+I+ GG+E
Sbjct: 107 PVIETGGNE 115




29|SequenceR|150|141|ILQPLVPLIK

>sp|116R_IIV3|UNCHARACTERIZED protein 116R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 ILQPLVPLI 9
+ QPLVP +
Sbjct: 60 VFQPLVPCV 68


>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 LQPLVPLI 9
LQP VPL+
Sbjct: 176 LQPNVPLV 183


>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 LQPLVPLI 9
LQP VPL+
Sbjct: 175 LQPNVPLV 182


>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 LQPLVPLI 9
LQP VPL+
Sbjct: 176 LQPNVPLV 183


>sp|RDRP_TMVRA|REPLICASE large subunit|Tobacco mosaic virus (strain Rakkyo)

Query: 2 LQPLVPLIK 10
++PL+P+++
Sbjct: 1193 IKPLIPMVR 1201


>sp|RDRP_TMVKR|REPLICASE large subunit|Tobacco mosaic virus (strain Korean

Query: 2 LQPLVPLIK 10
++PL+P+++
Sbjct: 1193 IKPLIPMVR 1201


>sp|RDRP_TMVB|REPLICASE large subunit|Tobacco mosaic virus (strain B935A)

Query: 2 LQPLVPLIK 10
++PL+P+++
Sbjct: 1193 IKPLIPMVR 1201


>sp|RDRP_TMV|REPLICASE large subunit|Tobacco mosaic virus (strain vulgare)

Query: 2 LQPLVPLIK 10
++PL+P+++
Sbjct: 1193 IKPLIPMVR 1201


>sp|RDRP_TBRFV|REPLICASE large subunit|Tomato brown rugose fruit virus

Query: 2 LQPLVPLIK 10
++PL+P+++
Sbjct: 1193 IKPLIPMVR 1201


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 ILQPLVP 7
+L+PLVP
Sbjct: 63 VLEPLVP 69


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 ILQPLVP 7
+L+PLVP
Sbjct: 63 VLEPLVP 69




30|SequenceR|155|146|NKIPIILQPL

>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 NKIPIILQPL 10
NK P+++ PL
Sbjct: 1300 NKYPLVVSPL 1309


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 NKIPIILQPL 10
NK P+++ PL
Sbjct: 1300 NKYPLVVSPL 1309


>sp|C_RABVA|PUTATIVE uncharacterized protein C|Rabies virus (strain PM1503/AVO1)

Query: 2 KIPIILQPL 10
K+P++LQPL
Sbjct: 49 KLPLVLQPL 57


>sp|LOADS_BPR69|SLIDING-CLAMP-LOADER small subunit|Escherichia phage RB69 (Bacteriophage RB69)

Query: 1 NKIPIILQPL 10
NK+PI+L+ L
Sbjct: 149 NKLPIVLKEL 158


>sp|VG43_ICHVA|UNCHARACTERIZED protein ORF43|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 NKIPIILQPL 10
N P++LQP
Sbjct: 849 NNEPLVLQPF 858




31|SequenceR|160|151|RLNLANKIPI

>sp|GC_MEHVH|ENVELOPE glycoprotein C homolog|Meleagrid herpesvirus 1 (strain H2)

Query: 3 NLANKIPI 10
NLA++IP+
Sbjct: 411 NLASRIPV 418


>sp|VP4_LDCPR|OUTER capsid protein VP4|Lymantria dispar cypovirus 1 (isolate

Query: 1 RLNLANKIPI 10
RL +AN +P+
Sbjct: 986 RLKVANYVPV 995


>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain

Query: 1 RLNLANKIP 9
RLNL+ K P
Sbjct: 431 RLNLSKKYP 439




32|SequenceR|165|156|IVQRNRLNLA

***** No hits found ******


33|SequenceR|170|161|KLTVCIVQRN

>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 KLTVCIVQ 8
+LTVCI+Q
Sbjct: 29 RLTVCIIQ 36


>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)

Query: 1 KLTVCIVQ 8
+LTVCI+Q
Sbjct: 29 RLTVCIIQ 36


>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)

Query: 2 LTVCIVQRN 10
LT CI++RN
Sbjct: 128 LTKCIIRRN 136


>sp|DPO22_BPK64|DEPOLYMERASE, capsule K25-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 2 LTVCIVQRN 10
+T C +QRN
Sbjct: 345 VTTCSIQRN 353


>sp|ST_POVBO|SMALL t antigen|Bovine polyomavirus (BPyV) (Bos taurus

Query: 4 VCIVQRN 10
+CIV RN
Sbjct: 118 ICIVMRN 124




34|SequenceR|175|166|LHQLVKLTVC

***** No hits found ******


35|SequenceR|180|171|EASVVLHQLV

***** No hits found ******


36|SequenceR|185|176|AKGVMEASVV

***** No hits found ******


37|SequenceR|190|181|YYPVLAKGVM

>sp|RPOA_LDVC|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 2 YPVLAKGVM 10
YPV+ +GVM
Sbjct: 1328 YPVVGQGVM 1336


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 2 YPVLAKGVM 10
YPV+ +GVM
Sbjct: 1330 YPVVGQGVM 1338


>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate

Query: 1 YYPVLAKGV 9
Y+P++AKG+
Sbjct: 816 YHPLIAKGL 824


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 YYPVLAKGVM 10
Y PV KGVM
Sbjct: 1956 YNPVYKKGVM 1965


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 YYPVLAKGVM 10
Y PV KGVM
Sbjct: 1949 YNPVYKKGVM 1958


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 YYPVLAKGVM 10
Y PV KGVM
Sbjct: 1956 YNPVYKKGVM 1965


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 YYPVLAKGVM 10
Y PV KGVM
Sbjct: 1949 YNPVYKKGVM 1958


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 YYPVLAKGVM 10
YYP KGV+
Sbjct: 879 YYPSDGKGVV 888


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 YYPVLAKGVM 10
YYP KGV+
Sbjct: 879 YYPSDGKGVV 888


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 1 YYPVLAKGVM 10
+YP +A+G++
Sbjct: 1655 FYPPVAQGII 1664




38|SequenceR|195|186|PLIQRYYPVL

>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 1 PLIQRYYP 8
PLIQRY P
Sbjct: 1827 PLIQRYLP 1834


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 PLIQRYYP 8
PLIQRY P
Sbjct: 1827 PLIQRYLP 1834


>sp|CAPSD_TASV2|CAPSID polyprotein VP90|Turkey astrovirus 2 (TAstV-2)

Query: 1 PLIQRYYP 8
P IQ+YYP
Sbjct: 537 PAIQKYYP 544


>sp|YR229_MIMIV|PUTATIVE ankyrin repeat protein R229|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PLIQRYYPV 9
P+ RYYP+
Sbjct: 252 PMANRYYPI 260


>sp|DNLI_BPT7|DNA ligase|Escherichia phage T7 (Bacteriophage T7)

Query: 1 PLIQRYYP 8
PL+Q Y+P
Sbjct: 179 PLLQEYFP 186


>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus

Query: 1 PLIQRYYPVL 10
PL+Q Y P+L
Sbjct: 547 PLMQPYTPIL 556


>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus

Query: 1 PLIQRYYPVL 10
PL+Q Y P+L
Sbjct: 547 PLMQPYNPIL 556


>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)

Query: 1 PLIQRYYPVL 10
P++Q Y P+L
Sbjct: 441 PIMQSYNPIL 450


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 1 PLIQRYYPVL 10
P++Q Y P+L
Sbjct: 441 PIMQSYNPIL 450


>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)

Query: 1 PLIQRYYPVL 10
P++Q Y P+L
Sbjct: 441 PIMQSYNPIL 450


>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United

Query: 1 PLIQRYYPVL 10
P++Q Y P+L
Sbjct: 441 PIMQSYNPIL 450


>sp|VP2_EHDV1|OUTER capsid protein VP2|Epizootic hemorrhagic disease virus 1

Query: 2 LIQRYYPV 9
+++RYYP+
Sbjct: 641 ILKRYYPI 648


>sp|VG58_BPMD2|GENE 58 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 LIQRYYP 8
+IQRYYP
Sbjct: 9 VIQRYYP 15


>sp|BILF1_EBVB9|G-PROTEIN coupled receptor BILF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 LIQRYYP 8
L+ RYYP
Sbjct: 262 LVARYYP 268


>sp|ORF3_PCV2|PROTEIN ORF3|Porcine circovirus 2 (PCV2)

Query: 1 PLIQRYYPV 9
PL+ R++PV
Sbjct: 6 PLVSRWFPV 14


>sp|P5_BPPRD|SPIKE protein P5|Enterobacteria phage PRD1 (Bacteriophage PRD1)

Query: 4 QRYYPVL 10
Q YYPVL
Sbjct: 84 QGYYPVL 90


>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)

Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 695 PTLEKYYP 702


>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)

Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 695 PTLEKYYP 702


>sp|ETF2_VACCW|EARLY transcription factor 82 kDa|Vaccinia virus (strain Western Reserve)

Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 695 PTLEKYYP 702


>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 695 PTLEKYYP 702


>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)

Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 695 PTLEKYYP 702


>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus

Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 695 PTLEKYYP 702


>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate

Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 695 PTLEKYYP 702


>sp|PAP1_ASFP4|PUTATIVE poly(A) polymerase catalytic subunit|African swine fever virus

Query: 2 LIQRYYPV 9
LI++YYP+
Sbjct: 181 LIEKYYPI 188


>sp|PAP1_ASFM2|PUTATIVE poly(A) polymerase catalytic subunit|African swine fever virus

Query: 2 LIQRYYPV 9
LI++YYP+
Sbjct: 181 LIEKYYPI 188


>sp|PAP1_ASFWA|PUTATIVE poly(A) polymerase catalytic subunit|African swine fever virus

Query: 2 LIQRYYPV 9
LI++YYP+
Sbjct: 181 LIEKYYPI 188


>sp|PAP1_ASFB7|PUTATIVE poly(A) polymerase catalytic subunit|African swine fever virus

Query: 2 LIQRYYPV 9
LI++YYP+
Sbjct: 181 LIEKYYPI 188


>sp|PAP1_ASFK5|PUTATIVE poly(A) polymerase catalytic subunit|African swine fever virus

Query: 2 LIQRYYPV 9
LI++YYP+
Sbjct: 181 LIEKYYPI 188


>sp|148R_ASFB7|UNCHARACTERIZED membrane protein EP148R|African swine fever virus (strain

Query: 2 LIQRYYPV 9
L+ RYYP+
Sbjct: 128 LVSRYYPI 135


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1 PLIQRYYPV 9
PL+Q+ +PV
Sbjct: 1003 PLVQKEWPV 1011


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1 PLIQRYYPV 9
PL+Q+ +PV
Sbjct: 1001 PLVQKEWPV 1009


>sp|ETF2_MYXVL|EARLY transcription factor 82 kDa|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 698 PKLEKYYP 705


>sp|ETF2_RFVKA|EARLY transcription factor 82 kDa|Rabbit fibroma virus (strain Kasza)

Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 698 PKLEKYYP 705


>sp|AN_EHV2|SHUTOFF alkaline exonuclease|Equine herpesvirus 2 (strain 86/87)

Query: 1 PLIQRYYPV 9
P++ YYP+
Sbjct: 189 PIVNNYYPL 197


>sp|RDRP_APRVF|RNA-DIRECTED RNA polymerase VP2|Aedes pseudoscutellaris reovirus (isolate

Query: 4 QRYYPVL 10
+RYYP L
Sbjct: 394 RRYYPAL 400


>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)

Query: 3 IQRYYPVL 10
I+R+YP L
Sbjct: 240 IERFYPFL 247




39|SequenceR|200|191|FINLVPLIQR

>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2 INLVPLIQR 10
+NL PLIQR
Sbjct: 1823 LNLSPLIQR 1831


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 2 INLVPLIQR 10
+NL PLIQR
Sbjct: 1823 LNLSPLIQR 1831


>sp|DPOL_IIV3|DNA polymerase 120R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 FINLVPLIQR 10
+I+L+P++QR
Sbjct: 374 YIDLLPVVQR 383


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra

Query: 2 INLVPLI 8
INL+PLI
Sbjct: 135 INLIPLI 141


>sp|F11_FOWPN|PROTEIN F11 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 2 INLVPLI 8
INLVPL+
Sbjct: 51 INLVPLV 57


>sp|YL649_MIMIV|UNCHARACTERIZED protein L649|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FINLVPLIQ 9
F+N PLI+
Sbjct: 146 FVNFTPLIK 154




40|SequenceR|205|196|GNMNKFINLV

>sp|TGB1_PMV|MOVEMENT and silencing protein TGBp1|Papaya mosaic potexvirus (PMV)

Query: 3 MNKFINLV 10
MN FINL+
Sbjct: 1 MNHFINLL 8


>sp|VP2_RRSVT|OUTER capsid protein VP2|Rice ragged stunt virus (isolate

Query: 4 NKFINLV 10
NKF+N+V
Sbjct: 818 NKFVNIV 824


>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 1 GNMNKFI 7
G+MNKF+
Sbjct: 148 GHMNKFL 154


>sp|MVP_PEMVC|P3N-PIPO polyprotein|Pepper mottle virus (isolate California)

Query: 1 GNMNKFI 7
G+MNKF+
Sbjct: 148 GHMNKFL 154


>sp|NSP1_ROTBA|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Cow/Thailand/A44/1988/G10P8[11])

Query: 3 MNKFINLV 10
+NKFIN V
Sbjct: 113 VNKFINFV 120




41|SequenceR|210|201|PLSYSGNMNK

>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)

Query: 1 PLSYSGNM 8
P+SY GN+
Sbjct: 304 PVSYQGNV 311


>sp|194K_TRVSY|REPLICASE large subunit|Tobacco rattle virus (strain SYM)

Query: 1 PLSYSGNM 8
P+SY GN+
Sbjct: 304 PVSYQGNV 311


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 2 LSYSGNMNK 10
L Y+G+MN+
Sbjct: 1983 LDYTGSMNQ 1991


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 2 LSYSGNMNK 10
L Y+G+MN+
Sbjct: 1982 LEYTGSMNQ 1990


>sp|V12_BPT3|GENE 1.2 protein|Enterobacteria phage T3 (Bacteriophage T3)

Query: 4 YSGNMN 9
YSGN+N
Sbjct: 7 YSGNLN 12


>sp|5052R_ASFM2|PROTEIN MGF 505-2R|African swine fever virus (isolate

Query: 2 LSYSGNMN 9
L Y GN+N
Sbjct: 244 LKYGGNLN 251


>sp|VF706_ASFWA|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 2 LSYSGNMNK 10
+SY+GN N+
Sbjct: 263 ISYAGNQNE 271


>sp|TFNPH_ASFP4|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 2 LSYSGNMNK 10
+SY+GN N+
Sbjct: 263 ISYAGNQNE 271


>sp|TFNPH_ASFK5|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 2 LSYSGNMNK 10
+SY+GN N+
Sbjct: 263 ISYAGNQNE 271


>sp|TFNPH_ASFM2|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 2 LSYSGNMNK 10
+SY+GN N+
Sbjct: 263 ISYAGNQNE 271


>sp|TFNPH_ASFB7|TERMINATION factor NPH-I homolog|African swine fever virus (strain

Query: 2 LSYSGNMNK 10
+SY+GN N+
Sbjct: 263 ISYAGNQNE 271




42|SequenceR|215|206|SCELRPLSYS

>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1 SCELRPLSY 9
SC L P+SY
Sbjct: 1078 SCTLPPVSY 1086


>sp|YL673_MIMIV|PUTATIVE serine/threonine-protein kinase L673|Acanthamoeba polyphaga

Query: 2 CELRPL 7
CE+RPL
Sbjct: 72 CEIRPL 77


>sp|Y193_BPT7|PROTEIN 19.3|Escherichia phage T7 (Bacteriophage T7)

Query: 4 LRPLSYS 10
+RPLSYS
Sbjct: 5 IRPLSYS 11


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 4 LRPLSYS 10
LRPLSY+
Sbjct: 169 LRPLSYT 175


>sp|RING4_BPCA1|RING protein 4/5|Bacteroides phage crAss001 (Bacteroides phage

Query: 2 CELRPLSYS 10
CEL P+ +S
Sbjct: 201 CELNPIIHS 209


>sp|003L_IIV3|UNCHARACTERIZED protein 003L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 SCELRPLSY 9
+C L PL+Y
Sbjct: 146 TCRLEPLTY 154




43|SequenceR|220|211|AMIAGSCELR

>sp|UL13_GAHVM|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 MIAGSCELR 10
+IAG C LR
Sbjct: 184 LIAGECALR 192


>sp|RDRP_NODAM|RNA-DIRECTED RNA polymerase|Nodamura virus (strain Mag115) (NoV)

Query: 1 AMIAGSC 7
A++AGSC
Sbjct: 33 ALVAGSC 39


>sp|POL1_CPSMV|RNA1 polyprotein|Cowpea severe mosaic virus (strain

Query: 2 MIAGSCEL 9
+IAGSC L
Sbjct: 225 VIAGSCAL 232




44|SequenceR|225|216|DLNCRAMIAG

>sp|L_MOBVC|RNA-DIRECTED RNA polymerase L|Mobala mammarenavirus (isolate Rat/Central African

Query: 1 DLNCRAM 7
D+NC AM
Sbjct: 1788 DVNCEAM 1794


>sp|RIR1_PSHV1|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 LNCRAMIAG 10
L CR ++AG
Sbjct: 334 LRCRGVLAG 342




45|SequenceR|230|221|SSGLHDLNCR

>sp|FUS_SV41|FUSION glycoprotein F0|Simian virus 41 (SV41)

Query: 1 SSGLHDLNCR 10
+SGL + NCR
Sbjct: 184 ASGLTEANCR 193


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 4 LHDLNC 9
LHDLNC
Sbjct: 607 LHDLNC 612


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 4 LHDLNCR 10
LHDL+C+
Sbjct: 1174 LHDLSCK 1180


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 4 LHDLNCR 10
LHDL+C+
Sbjct: 1174 LHDLSCK 1180


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 4 LHDLNCR 10
LHDL+C+
Sbjct: 1170 LHDLSCK 1176


>sp|SPIKE_CVPRM|SPIKE glycoprotein|Porcine respiratory coronavirus (strain RM4)

Query: 1 SSGLHDLN 8
+SGLHDL+
Sbjct: 448 NSGLHDLS 455


>sp|SPIKE_CVPR8|SPIKE glycoprotein|Porcine respiratory coronavirus (strain 86/137004

Query: 1 SSGLHDLN 8
+SGLHDL+
Sbjct: 448 NSGLHDLS 455


>sp|VG40_BPPH8|PROTEIN 40A|Enterobacteria phage phi80 (Bacteriophage phi-80)

Query: 1 SSGLHDLN 8
++GLHD+N
Sbjct: 3 NTGLHDVN 10


>sp|SPIKE_CVCAI|SPIKE glycoprotein|Canine coronavirus (strain Insavc-1) (CCoV)

Query: 1 SSGLHDLN 8
+SGLHDL+
Sbjct: 675 NSGLHDLS 682


>sp|SPIKE_FIPV|SPIKE glycoprotein|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 SSGLHDLN 8
+SGLHDL+
Sbjct: 675 NSGLHDLS 682


>sp|L_GOGV|RNA-DIRECTED RNA polymerase L|Alethinophid 1 reptarenavirus (isolate

Query: 2 SGLHDLNC 9
S +H+LNC
Sbjct: 50 STIHELNC 57


>sp|SPIKE_CVCAK|SPIKE glycoprotein|Canine coronavirus (strain K378) (CCoV)

Query: 1 SSGLHDLN 8
+SGLHDL+
Sbjct: 676 NSGLHDLS 683


>sp|SPIKE_CVPMI|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 SSGLHDLN 8
+SGLHDL+
Sbjct: 672 NSGLHDLS 679


>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 SSGLHDLN 8
+SGLHDL+
Sbjct: 672 NSGLHDLS 679


>sp|SPIKE_CVCBG|SPIKE glycoprotein|Canine coronavirus (strain BGF10) (CCoV)

Query: 1 SSGLHDLN 8
+SGLHDL+
Sbjct: 676 NSGLHDLS 683


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 4 LHDLNC 9
+HDLNC
Sbjct: 751 MHDLNC 756


>sp|CAPSD_TTVD1|CAPSID protein|Torque teno tupaia virus (isolate

Query: 1 SSGLHD 6
SSGLHD
Sbjct: 362 SSGLHD 367


>sp|VP4_FDVS|UNCHARACTERIZED protein VP4|Fiji disease virus (isolate Sugarcane)

Query: 4 LHDLNCR 10
L+DLNC+
Sbjct: 820 LNDLNCK 826


>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 SSGLHDLNCR 10
++ H+LNC+
Sbjct: 320 TASRHELNCK 329


>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 SSGLHDLNCR 10
++ H+LNC+
Sbjct: 320 TASRHELNCK 329


>sp|L_OLVVA|RNA-DIRECTED RNA polymerase L|Oliveros mammarenavirus (isolate

Query: 1 SSGLHDLNCR 10
S+ LH++ C+
Sbjct: 1415 SAALHNIKCK 1424


>sp|NECK2_BPT4|NECK protein gp14|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 SGLHDLN 8
+G+HD+N
Sbjct: 208 NGIHDIN 214


>sp|SPIKE_CVPRT|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 SSGLHDLN 8
+SG+HDL+
Sbjct: 670 NSGVHDLS 677


>sp|SPIKE_CVPPU|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 SSGLHDLN 8
+SG+HDL+
Sbjct: 670 NSGVHDLS 677




46|SequenceR|235|226|STPPDSSGLH

>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21

Query: 1 STPPDSSG 8
STPPDS G
Sbjct: 201 STPPDSPG 208


>sp|SPIKE_FIPV|SPIKE glycoprotein|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 3 PPDSSGLH 10
P D+SGLH
Sbjct: 672 PSDNSGLH 679


>sp|SPIKE_CVCAI|SPIKE glycoprotein|Canine coronavirus (strain Insavc-1) (CCoV)

Query: 3 PPDSSGLH 10
P D+SGLH
Sbjct: 672 PSDNSGLH 679


>sp|SPIKE_CVCBG|SPIKE glycoprotein|Canine coronavirus (strain BGF10) (CCoV)

Query: 3 PPDSSGLH 10
P D+SGLH
Sbjct: 673 PSDNSGLH 680


>sp|SPIKE_CVPRM|SPIKE glycoprotein|Porcine respiratory coronavirus (strain RM4)

Query: 3 PPDSSGLH 10
P D+SGLH
Sbjct: 445 PSDNSGLH 452


>sp|SPIKE_CVPR8|SPIKE glycoprotein|Porcine respiratory coronavirus (strain 86/137004

Query: 3 PPDSSGLH 10
P D+SGLH
Sbjct: 445 PSDNSGLH 452


>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 3 PPDSSGLH 10
P D+SGLH
Sbjct: 669 PSDNSGLH 676


>sp|SPIKE_CVPMI|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 3 PPDSSGLH 10
P D+SGLH
Sbjct: 669 PSDNSGLH 676


>sp|SPIKE_CVCAK|SPIKE glycoprotein|Canine coronavirus (strain K378) (CCoV)

Query: 3 PPDSSGLH 10
P D+SGLH
Sbjct: 673 PSDNSGLH 680


>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20

Query: 1 STPPDSSG 8
STPPDS G
Sbjct: 201 STPPDSPG 208


>sp|GB_MUHVS|ENVELOPE glycoprotein B|Murid herpesvirus 1 (strain Smith)

Query: 1 STPPDSSGLH 10
S PP + GLH
Sbjct: 834 SGPPGAPGLH 843


>sp|PRO_ADEB7|PROTEASE adenovirus 7 (BAdV-7)

Query: 2 TPPDSSGLH 10
TPP+ + LH
Sbjct: 157 TPPNPTNLH 165


>sp|VE7_HPV6B|PROTEIN E7|Human papillomavirus type 6b

Query: 3 PPDSSGLH 10
PPD GLH
Sbjct: 17 PPDPVGLH 24


>sp|VF229_IIV3|UNCHARACTERIZED protein 229L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 TPPDSSGL 9
TPPDSS L
Sbjct: 41 TPPDSSDL 48


>sp|EXON_IIV6|PUTATIVE exonuclease 012L|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 PPDSSGL 9
PPDSS L
Sbjct: 536 PPDSSDL 542


>sp|VE7_HPV11|PROTEIN E7|Human papillomavirus 11

Query: 3 PPDSSGLH 10
PPD GLH
Sbjct: 17 PPDPVGLH 24


>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19

Query: 1 STPPDSSG 8
STPPDS G
Sbjct: 201 STPPDSPG 208


>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24

Query: 1 STPPDSSG 8
STPPDS G
Sbjct: 201 STPPDSPG 208


>sp|VE7_HPV55|PROTEIN E7|Human papillomavirus type 55

Query: 3 PPDSSGLH 10
PPD GLH
Sbjct: 17 PPDPVGLH 24


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 4 PDSSGL 9
PDSSGL
Sbjct: 2804 PDSSGL 2809


>sp|VE7_HPV6A|PROTEIN E7|Human papillomavirus type 6a

Query: 3 PPDSSGLH 10
PPD GLH
Sbjct: 17 PPDPVGLH 24


>sp|VE7_HPV44|PROTEIN E7|Human papillomavirus 44

Query: 3 PPDSSGLH 10
PPD GLH
Sbjct: 17 PPDPVGLH 24


>sp|PRO_ADEB4|PROTEASE adenovirus 4 (BAdV-4)

Query: 2 TPPDSSGLH 10
TP D S LH
Sbjct: 157 TPSDPSSLH 165


>sp|MOVP_MRFVC|PUTATIVE movement protein|Maize rayado fino virus (isolate

Query: 2 TPPDSSGLH 10
TPP SSGL
Sbjct: 247 TPPASSGLR 255


>sp|SPIKE_CVPPU|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 3 PPDSSGLH 10
P D+SG+H
Sbjct: 667 PSDNSGVH 674


>sp|SPIKE_CVPRT|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 3 PPDSSGLH 10
P D+SG+H
Sbjct: 667 PSDNSGVH 674


>sp|PEBPH_MIMIV|PHOSPHATIDYLETHANOLAMINE-BINDING protein homolog R644|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 TPPDSSGLH 10
+PP SG H
Sbjct: 80 SPPKGSGYH 88


>sp|CAPSD_AQRVA|INNER capsid protein VP3|Aquareovirus A (isolate Chum

Query: 2 TPPDSSGLH 10
T PDSS LH
Sbjct: 946 TAPDSSFLH 954


>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14

Query: 1 STPPDSSG 8
STPP+S G
Sbjct: 201 STPPESPG 208


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 2 TPPDSSGLH 10
TP SSGLH
Sbjct: 487 TPNTSSGLH 495




47|SequenceR|240|231|AVQSASTPPD

>sp|MATRX_MOKV|MATRIX protein|Mokola virus (MOKV)

Query: 4 SASTPPD 10
SAS PPD
Sbjct: 21 SASAPPD 27


>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 4 SASTPPD 10
SAS PPD
Sbjct: 613 SASDPPD 619




48|SequenceR|245|236|NVIIEAVQSA

***** No hits found ******


49|SequenceR|250|241|IGDGSNVIIE

>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2 GDGSNVIIE 10
GDG N ++E
Sbjct: 401 GDGENNVVE 409


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2 GDGSNVIIE 10
GDG N ++E
Sbjct: 401 GDGENNVVE 409


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 3 DGSNVIIE 10
DGS V++E
Sbjct: 118 DGSKVVVE 125


>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 GDGSNVIIE 10
GD NV+IE
Sbjct: 32 GDWENVLIE 40


>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 GDGSNVIIE 10
GD NV+IE
Sbjct: 32 GDWENVLIE 40


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 3 DGSNVIIE 10
DG N+++E
Sbjct: 641 DGENILVE 648




50|SequenceR|255|246|QQSYDIGDGS

>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 QSYDIGD 8
+SYD+GD
Sbjct: 141 KSYDLGD 147


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 QSYDIGD 8
+SYD+GD
Sbjct: 141 KSYDLGD 147


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 QSYDIGD 8
+SYD+GD
Sbjct: 141 KSYDLGD 147


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 QSYDIGD 8
+SYD+GD
Sbjct: 141 KSYDLGD 147


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)

Query: 2 QSYDIGD 8
+SYD+GD
Sbjct: 141 KSYDLGD 147


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 QSYDIGD 8
+SYD+GD
Sbjct: 141 KSYDLGD 147


>sp|VP8_MYRV9|UNCHARACTERIZED protein VP8|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 4 YDIGDGS 10
YDIGD S
Sbjct: 420 YDIGDES 426


>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 1 QQSYDIGD 8
+Q YD+GD
Sbjct: 278 RQLYDLGD 285




51|SequenceR|260|251|INERKQQSYD

>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 NERKQQSYD 10
N+++QQ YD
Sbjct: 559 NQQQQQRYD 567


>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 NERKQQSYD 10
N+++QQ YD
Sbjct: 559 NQQQQQRYD 567


>sp|US10_GAHVM|VIRION protein US10 homolog|Gallid herpesvirus 2 (strain

Query: 1 INERKQQSYD 10
++ K+QSYD
Sbjct: 18 VDSPKEQSYD 27


>sp|US10_GAHVG|VIRION protein US10 homolog|Gallid herpesvirus 2 (strain GA)

Query: 1 INERKQQSYD 10
++ K+QSYD
Sbjct: 18 VDSPKEQSYD 27


>sp|PHOSP_ABLVB|PHOSPHOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 INERKQQSYD 10
INE K QS++
Sbjct: 58 INEAKPQSFE 67




52|SequenceR|265|256|QILDGINERK

>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 1 QILDGINERK 10
Q+LDG+N+RK
Sbjct: 91 QMLDGLNKRK 100


>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969

Query: 1 QILDGIN 7
+ILDGIN
Sbjct: 57 RILDGIN 63


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 ILDGINER 9
ILDGI+E+
Sbjct: 569 ILDGISEQ 576


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 ILDGINER 9
ILDGI+E+
Sbjct: 569 ILDGISEQ 576


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 ILDGINER 9
ILDGI+E+
Sbjct: 569 ILDGISEQ 576


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 ILDGINER 9
ILDGI+E+
Sbjct: 569 ILDGISEQ 576


>sp|Y284L_PBCV1|UNCHARACTERIZED protein A284L|Paramecium bursaria Chlorella virus 1

Query: 1 QILDGINE 8
++LDG+NE
Sbjct: 46 KLLDGMNE 53


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2 ILDGINERK 10
+LD +N+RK
Sbjct: 89 MLDSVNKRK 97


>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain

Query: 1 QILDGINE 8
QILDGI++
Sbjct: 578 QILDGISD 585


>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate

Query: 1 QILDGINE 8
QILDGI++
Sbjct: 581 QILDGISD 588


>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977

Query: 1 QILDGIN 7
+ILDGIN
Sbjct: 73 RILDGIN 79


>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976

Query: 1 QILDGIN 7
+ILDGIN
Sbjct: 73 RILDGIN 79


>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975

Query: 1 QILDGIN 7
+ILDGIN
Sbjct: 74 RILDGIN 80


>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port

Query: 1 QILDGIN 7
+ILDGIN
Sbjct: 73 RILDGIN 79


>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975

Query: 1 QILDGIN 7
+ILDGIN
Sbjct: 73 RILDGIN 79




53|SequenceR|270|261|AELTEQILDG

>sp|RDRP_TMVRA|REPLICASE large subunit|Tobacco mosaic virus (strain Rakkyo)

Query: 1 AELTEQILD 9
+ELT Q+LD
Sbjct: 1341 SELTRQLLD 1349


>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)

Query: 1 AELTEQILD 9
+ELT Q+LD
Sbjct: 1341 SELTRQLLD 1349


>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)

Query: 1 AELTEQILD 9
+ELT Q+LD
Sbjct: 1341 SELTRQLLD 1349


>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 1 AELTEQILD 9
+ELT Q+LD
Sbjct: 1341 SELTRQLLD 1349


>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 1 AELTEQILD 9
+ELT Q+LD
Sbjct: 1341 SELTRQLLD 1349


>sp|RDRP_TMVKR|REPLICASE large subunit|Tobacco mosaic virus (strain Korean

Query: 1 AELTEQILD 9
+ELT Q+LD
Sbjct: 1341 SELTRQLLD 1349


>sp|RDRP_TMV|REPLICASE large subunit|Tobacco mosaic virus (strain vulgare)

Query: 1 AELTEQILD 9
+ELT Q+LD
Sbjct: 1341 SELTRQLLD 1349


>sp|RDRP_TMVB|REPLICASE large subunit|Tobacco mosaic virus (strain B935A)

Query: 1 AELTEQILD 9
+ELT Q+LD
Sbjct: 1341 SELTRQLLD 1349


>sp|VE6_HPV09|PROTEIN E6|Human papillomavirus 9

Query: 3 LTEQILD 9
LTEQI+D
Sbjct: 3 LTEQIMD 9


>sp|RDRP_TMVOM|REPLICASE large subunit|Tobacco mosaic virus (strain OM)

Query: 1 AELTEQILD 9
+ELT Q+LD
Sbjct: 1341 SELTRQLLD 1349




54|SequenceR|275|266|GYREFAELTE

>sp|AN_GAHVM|ALKALINE nuclease|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 GYREFAELTE 10
GYR F EL +
Sbjct: 506 GYRAFGELVD 515


>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)

Query: 1 GYREFAEL 8
GY +FAEL
Sbjct: 288 GYPQFAEL 295


>sp|A53R_VACCW|TRUNCATED secreted TNF-receptor-like protein A53R|Vaccinia virus (strain

Query: 1 GYREFAE 7
GY+EFA+
Sbjct: 7 GYKEFAD 13


>sp|A53_VACCC|TRUNCATED secreted TNF-receptor-like protein A53|Vaccinia virus (strain

Query: 1 GYREFAE 7
GY+EFA+
Sbjct: 7 GYKEFAD 13


>sp|IBMP_CAMVC|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain CM-1841)

Query: 1 GYREFAELTE 10
Y++FA +TE
Sbjct: 169 AYKKFATITE 178


>sp|NCAP_VHSV0|NUCLEOPROTEIN hemorrhagic septicemia virus (strain

Query: 2 YREFAELT 9
+REFAEL
Sbjct: 328 FREFAELV 335


>sp|LTP_MUHVK|LARGE tegument protein deneddylase|Murid herpesvirus 1 (strain K181)

Query: 1 GYREFAEL 8
YR FAEL
Sbjct: 1117 AYRNFAEL 1124




55|SequenceR|280|271|FANEGGYREF

>sp|SPIKE_ADECT|FIBER protein|Canine adenovirus serotype 2 (strain

Query: 1 FANEGGYR 8
F EGGYR
Sbjct: 402 FVGEGGYR 409


>sp|VPN1_BPPHE|PUTATIVE tail sheath protein|Enterococcus phage phiEF24C (Enterococcus

Query: 1 FANEGGY 7
ANEGGY
Sbjct: 309 LANEGGY 315


>sp|TSP_BPTWO|TAIL sheath protein|Staphylococcus phage Twort (strain DSM

Query: 1 FANEGGY 7
F NEGGY
Sbjct: 327 FKNEGGY 333


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 FANEGGYR 8
ANE GYR
Sbjct: 916 LANETGYR 923


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 3 NEGGYRE 9
NE GYR+
Sbjct: 922 NESGYRQ 928


>sp|RPB2_IIV6|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 6

Query: 2 ANEGGYR 8
ANEGG R
Sbjct: 1097 ANEGGLR 1103


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 2 ANEGGYREF 10
AN+G +R+F
Sbjct: 1099 ANDGWFRKF 1107


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 2 ANEGGYREF 10
AN+G +R+F
Sbjct: 1100 ANDGWFRKF 1108


>sp|RIR1_ASFWA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (isolate

Query: 1 FANEGGYR 8
+AN+GG R
Sbjct: 259 YANQGGLR 266


>sp|RIR1_ASFM2|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (isolate

Query: 1 FANEGGYR 8
+AN+GG R
Sbjct: 260 YANQGGLR 267


>sp|RIR1_ASFP4|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (isolate

Query: 1 FANEGGYR 8
+AN+GG R
Sbjct: 259 YANQGGLR 266


>sp|RIR1_ASFB7|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (strain

Query: 1 FANEGGYR 8
+AN+GG R
Sbjct: 259 YANQGGLR 266


>sp|RIR1_ASFK5|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (isolate

Query: 1 FANEGGYR 8
+AN+GG R
Sbjct: 260 YANQGGLR 267


>sp|TGB2_BSMV|MOVEMENT protein TGB2|Barley stripe mosaic virus (BSMV)

Query: 1 FANEGGYRE 9
FAN G YR+
Sbjct: 46 FANGGSYRD 54


>sp|054L_IIV3|UNCHARACTERIZED protein 054L|Invertebrate iridescent virus 3 (IIV-3)

Query: 5 GGYREF 10
GG+REF
Sbjct: 70 GGFREF 75


>sp|TGB2_PMTVS|MOVEMENT protein TGB2|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 1 FANEGGYRE 9
FAN G YR+
Sbjct: 48 FANGGQYRD 56


>sp|YR848_MIMIV|PUTATIVE ankyrin repeat protein R848|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FANEGGYRE 9
FA+E GY E
Sbjct: 135 FASENGYLE 143




56|SequenceR|285|276|YKINIFANEG

>sp|L_SBVBH|RNA-DIRECTED RNA polymerase L|Bovine Schmallenberg virus (isolate

Query: 1 YKINIF 6
YKINIF
Sbjct: 4 YKINIF 9


>sp|Y034_OSHVF|UNCHARACTERIZED protein ORF34|Ostreid herpesvirus 1 (isolate France)

Query: 1 YKINIFANE 9
+K+N F NE
Sbjct: 18 FKVNYFTNE 26




57|SequenceR|290|281|YTPVVYKINI

>sp|US8A_HHV1F|US8.5 protein|Human herpesvirus 1 (strain F)

Query: 1 YTPVVYKINI 10
YTPV IN+
Sbjct: 15 YTPVAMGINL 24


>sp|US8A_HHV11|PROTEIN US8.5|Human herpesvirus 1 (strain 17)

Query: 1 YTPVVYKINI 10
YTPV IN+
Sbjct: 15 YTPVAMGINL 24


>sp|SPIKE_PEDV7|SPIKE glycoprotein|Porcine epidemic diarrhea virus (strain

Query: 1 YTPVVYKINI 10
YTP Y +N+
Sbjct: 205 YTPTYYMLNV 214


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 1 YTPVVYKINI 10
Y+ +VY +NI
Sbjct: 1015 YSDIVYLVNI 1024


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 1 YTPVVYKINI 10
Y+ +VY +NI
Sbjct: 1015 YSDIVYLVNI 1024


>sp|VP2_ROTTU|INNER capsid protein VP2|Rotavirus A (isolate RVA/Monkey/United

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 804 PILYKIN 810


>sp|VP2_ROTSR|INNER capsid protein VP2|Rotavirus A (strain RVA/SA11-Ramig/G3P[X])

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 799 PILYKIN 805


>sp|VP2_ROTSH|INNER capsid protein VP2|Rotavirus A (isolate RVA/Monkey/South

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 799 PILYKIN 805


>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 809 PILYKIN 815


>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 804 PILYKIN 810


>sp|VP2_ROTW3|INNER capsid protein VP2|Rotavirus A (strain RVA/Cow/United

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 797 PILYKIN 803


>sp|VP2_ROTRF|INNER capsid protein VP2|Rotavirus A (strain

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 797 PILYKIN 803


>sp|VP2_ROTBU|INNER capsid protein VP2|Rotavirus A (strain RVA/Cow/United

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 798 PILYKIN 804


>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 796 PILYKIN 802


>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 797 PILYKIN 803


>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 807 PILYKIN 813


>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 807 PILYKIN 813


>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 813 PILYKIN 819


>sp|VP2_ROTBN|INNER capsid protein VP2|Rotavirus A (strain RVA/Cow/United

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 797 PILYKIN 803


>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 807 PILYKIN 813


>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 807 PILYKIN 813


>sp|VP2_ROTS1|INNER capsid protein VP2|Rotavirus A (strain RVA/SA11-Both/G3P5B[2])

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 798 PILYKIN 804


>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 796 PILYKIN 802


>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 796 PILYKIN 802


>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 797 PILYKIN 803


>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 797 PILYKIN 803


>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain

Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 807 PILYKIN 813


>sp|VF62_ASFK5|UNCHARACTERIZED protein C62L|African swine fever virus (isolate

Query: 2 TPVVYKINI 10
TP V KINI
Sbjct: 4 TPFVVKINI 12


>sp|VG18_ICHVA|UNCHARACTERIZED protein ORF18|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 TPVVYKINI 10
T VVY++N+
Sbjct: 247 TGVVYRVNL 255




58|SequenceR|296|286|NLLCSEYTPVV

>sp|VIF_FIVT2|VIRION infectivity factor|Feline immunodeficiency virus (isolate TM2)

Query: 1 NLLCSEYTP 9
NL+C +Y+P
Sbjct: 189 NLMCLKYSP 197


>sp|GB_ELHVK|ENVELOPE glycoprotein B|Elephantid herpesvirus 1 (isolate Asian

Query: 1 NLLCSEYTP 9
N+ C EY+P
Sbjct: 77 NIQCPEYSP 85


>sp|NS2_MPRVN|PUTATIVE non-structural protein 2|Micromonas pusilla reovirus (isolate

Query: 1 NLLCSEYTPVV 11
NL+CS+ P V
Sbjct: 201 NLVCSQRNPKV 211


>sp|Y081_OSHVF|UNCHARACTERIZED protein ORF81|Ostreid herpesvirus 1 (isolate France)

Query: 4 CSEYTP 9
CS+YTP
Sbjct: 117 CSQYTP 122


>sp|YR835_MIMIV|PUTATIVE ankyrin repeat protein R835|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 SEYTPVV 11
SEYTP+V
Sbjct: 190 SEYTPLV 196


>sp|YO2_ADEG1|UNCHARACTERIZED protein ORF2|Fowl adenovirus A serotype 1

Query: 2 LLCSEYTPVV 11
LLC+ Y P V
Sbjct: 88 LLCNGYNPAV 97


>sp|TEG7_PSHV1|TEGUMENT protein UL51|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 LCSEYTPVV 11
+CS+Y P+V
Sbjct: 32 VCSDYEPLV 40


>sp|DNBI_MUHVS|MAJOR DNA-binding protein|Murid herpesvirus 1 (strain Smith)

Query: 3 LCSEYTPVV 11
LC + TPVV
Sbjct: 36 LCDKATPVV 44


>sp|VE2_MMPV1|REGULATORY protein E2|Macaca mulata papillomavirus 1 (Rhpv

Query: 5 SEYTPVV 11
S+YTP+V
Sbjct: 286 SDYTPIV 292


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 NLLCSEYTP 9
+LLC+ Y P
Sbjct: 1187 SLLCASYEP 1195


>sp|RP147_VACCW|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Western Reserve)

Query: 1 NLLCSEYTP 9
+LLC+ Y P
Sbjct: 1188 SLLCASYEP 1196


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 1 NLLCSEYTP 9
+LLC+ Y P
Sbjct: 1187 SLLCASYEP 1195


>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1

Query: 2 LLCSEYTPVV 11
LLC TP+V
Sbjct: 178 LLCLSATPIV 187


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 1 NLLCSEYTP 9
+LLC+ Y P
Sbjct: 1187 SLLCASYEP 1195


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 NLLCSEYTP 9
+LLC+ Y P
Sbjct: 1187 SLLCASYEP 1195


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 NLLCSEYTP 9
+LLC+ Y P
Sbjct: 1187 SLLCASYEP 1195


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 3 LCSEYTP 9
LC E+TP
Sbjct: 3161 LCDEFTP 3167


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 3 LCSEYTP 9
LC E+TP
Sbjct: 3186 LCDEFTP 3192


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 3 LCSEYTP 9
LC E+TP
Sbjct: 3161 LCDEFTP 3167


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 3 LCSEYTPVV 11
L S+YTPV+
Sbjct: 1360 LLSKYTPVM 1368


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 3 LCSEYTPVV 11
L S+YTPV+
Sbjct: 1360 LLSKYTPVM 1368


>sp|REPA_MSVSE|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype C

Query: 3 LCSEYTPV 10
LCS +TP+
Sbjct: 38 LCSHWTPL 45


>sp|VG41_ALHV1|UNCHARACTERIZED gene 41 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 LLCSEYTP 9
LLCS+ TP
Sbjct: 63 LLCSQVTP 70


>sp|REP_MSVSE|REPLICATION-ASSOCIATED protein|Maize streak virus genotype C

Query: 3 LCSEYTPV 10
LCS +TP+
Sbjct: 38 LCSHWTPL 45




THE END