PACRG_HUMAN Blast Output
Viruses
1|Sequence|1|10|MVAEKETLSL

***** No hits found ******


2|Sequence|6|15|ETLSLNKCPD

>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain

Query: 1 ETLSLNKCP 9
ET++LNK P
Sbjct: 22 ETITLNKLP 30


>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1 ETLSLNKCPD 10
ETLSLN+ D
Sbjct: 309 ETLSLNETED 318


>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 1 ETLSLNKCPD 10
ETLSLN+ D
Sbjct: 309 ETLSLNETED 318


>sp|ICP27_SHV21|MRNA export factor ICP27 homolog|Saimiriine herpesvirus 2 (strain 11)

Query: 2 TLSLNKCPD 10
T LNKCP
Sbjct: 383 TQHLNKCPS 391


>sp|QIN_AVIS3|TRANSFORMING protein Qin|Avian sarcoma virus (strain 31)

Query: 1 ETLSLNKC 8
LSLNKC
Sbjct: 193 HNLSLNKC 200




3|Sequence|11|20|NKCPDKMPKR

>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 2 KCPDKMPKR 10
KCP + PKR
Sbjct: 311 KCPSRRPKR 319


>sp|GC_EHV1D|ENVELOPE glycoprotein C|Equine herpesvirus 1 (strain Kentucky

Query: 4 PDKMPKR 10
PD++PKR
Sbjct: 159 PDRLPKR 165


>sp|GC_EHV1B|ENVELOPE glycoprotein C|Equine herpesvirus 1 (strain Ab4p)

Query: 4 PDKMPKR 10
PD++PKR
Sbjct: 159 PDRLPKR 165


>sp|GC_EHV4|ENVELOPE glycoprotein C|Equine herpesvirus 4 (strain 1942)

Query: 4 PDKMPKR 10
PD++PKR
Sbjct: 176 PDRLPKR 182


>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36

Query: 2 KCPDKMPKR 10
+CPDK P +
Sbjct: 443 RCPDKTPPK 451


>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49

Query: 2 KCPDKMP 8
+CPDK P
Sbjct: 438 RCPDKQP 444


>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8

Query: 2 KCPDKMPKR 10
+CPDK P +
Sbjct: 442 RCPDKSPPK 450


>sp|US19_HCMVM|TRANSMEMBRANE protein US19|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 NKCPDKMP 8
++CP K+P
Sbjct: 90 DRCPRKLP 97


>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19

Query: 2 KCPDKMPKR 10
+CPDK P +
Sbjct: 473 RCPDKNPPK 481


>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25

Query: 2 KCPDKMPKR 10
+CPDK P +
Sbjct: 444 RCPDKNPPK 452


>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38

Query: 2 KCPDKMPK 9
KCPD +P+
Sbjct: 437 KCPDAVPE 444


>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b

Query: 2 KCPDKMPKR 10
+CPDK P +
Sbjct: 452 RCPDKNPPK 460


>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 NKCPDKMP 8
++CP K+P
Sbjct: 90 DRCPRKLP 97


>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 NKCPDKMP 8
++CP K+P
Sbjct: 90 DRCPRKLP 97


>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5

Query: 2 KCPDKMPKR 10
+CPDK P +
Sbjct: 443 RCPDKNPPK 451


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 4 PDKMPKR 10
P+K+PKR
Sbjct: 2441 PNKLPKR 2447


>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 4 PDKMPKR 10
P+K+PKR
Sbjct: 2441 PNKLPKR 2447


>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63

Query: 2 KCPDKMP 8
KCPD +P
Sbjct: 432 KCPDNVP 438


>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20

Query: 2 KCPDKMPKR 10
+CPDK P +
Sbjct: 443 RCPDKNPPK 451


>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22

Query: 2 KCPDKMP 8
KCPD +P
Sbjct: 433 KCPDAVP 439


>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23

Query: 2 KCPDKMP 8
KCPD +P
Sbjct: 433 KCPDAVP 439


>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14

Query: 2 KCPDKMPKR 10
+CPDK P +
Sbjct: 445 RCPDKNPPK 453


>sp|GLYC_HRSV1|MAJOR surface glycoprotein G|Human respiratory syncytial virus B

Query: 2 KCPDKMPKR 10
K P KMPK+
Sbjct: 217 KTPAKMPKK 225


>sp|VF423_ASFWA|UNCHARACTERIZED protein E423R|African swine fever virus (isolate

Query: 2 KCPDKMPK 9
K PDK+P+
Sbjct: 49 KTPDKIPE 56




4|Sequence|16|25|KMPKRTKLLA

>sp|VP1_CDDV1|VIRAL protein 1|Chaetoceros diatodnavirus 1 (Chaetoceros setoense

Query: 1 KMPKRTKLLA 10
+ PKRTKL A
Sbjct: 60 RAPKRTKLDA 69




5|Sequence|21|30|TKLLAQQPLP

>sp|RDRP_FDVS|RNA-DIRECTED RNA polymerase VP1|Fiji disease virus (isolate Sugarcane)

Query: 1 TKLLAQQPLP 10
TK++ QQP P
Sbjct: 538 TKVMVQQPEP 547




6|Sequence|26|35|QQPLPVHQPH

>sp|POL2_GCMV|RNA2 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 2 QPLPVHQP 9
QP+P HQP
Sbjct: 733 QPVPKHQP 740


>sp|CAPSD_BPDPK|MAJOR capsid protein|Pseudomonas phage phiKZ

Query: 1 QQPLPVHQP 9
+ P+P+H P
Sbjct: 482 RHPIPMHAP 490


>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 QPLPVH 7
QP+P+H
Sbjct: 207 QPIPIH 212


>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 QPLPVH 7
QP+P+H
Sbjct: 205 QPIPIH 210


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 QPLPVH 7
QP+P+H
Sbjct: 213 QPIPIH 218


>sp|VF232_IIV6|PUTATIVE ubiquitin thioesterase 232R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 QQPLPVHQP 9
+QP PVH P
Sbjct: 108 RQPSPVHSP 116


>sp|VG10_ICHVA|PUTATIVE membrane protein ORF10|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 PLPVHQP 9
P P+H P
Sbjct: 137 PAPIHSP 143


>sp|DNB2_ADES1|DNA-BINDING protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 3 PLPVHQP 9
P+P+H P
Sbjct: 316 PMPIHFP 322


>sp|VGLN_BEFVB|NON-STRUCTURAL glycoprotein GNS|Bovine ephemeral fever virus (strain

Query: 1 QQPLPVHQPH 10
+QP+P++ H
Sbjct: 318 KQPIPINNLH 327


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 5 PVHQPH 10
P+HQPH
Sbjct: 1321 PIHQPH 1326


>sp|GE_EHV1D|ENVELOPE glycoprotein E|Equine herpesvirus 1 (strain Kentucky

Query: 3 PLPVHQP 9
P+P+H+P
Sbjct: 527 PVPLHKP 533


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 5 PVHQPH 10
P+HQPH
Sbjct: 1338 PIHQPH 1343


>sp|POLN_GFKVM|NON-STRUCTURAL replication polyprotein|Grapevine fleck virus (isolate Italy/MT48)

Query: 1 QQPLPVHQPH 10
+QPLP+ Q H
Sbjct: 977 RQPLPIRQVH 986


>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 QQPLPVHQPH 10
++PLPV++ H
Sbjct: 429 ERPLPVYRVH 438


>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 QQPLPVHQPH 10
++PLPV++ H
Sbjct: 429 ERPLPVYRVH 438


>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 QQPLPVHQPH 10
++PLPV++ H
Sbjct: 429 ERPLPVYRVH 438


>sp|GE_EHV1B|ENVELOPE glycoprotein E|Equine herpesvirus 1 (strain Ab4p)

Query: 3 PLPVHQP 9
P+P+H+P
Sbjct: 525 PVPLHKP 531


>sp|GE_EHV1A|ENVELOPE glycoprotein E|Equine herpesvirus 1 (strain AB1)

Query: 3 PLPVHQP 9
P+P+H+P
Sbjct: 525 PVPLHKP 531




7|Sequence|31|40|VHQPHSLVSE

>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16

Query: 1 VHQPHSLVSE 10
VHQPH V E
Sbjct: 916 VHQPHRGVIE 925


>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7

Query: 1 VHQPHSLVSE 10
VHQPH V E
Sbjct: 913 VHQPHRGVIE 922


>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3

Query: 1 VHQPHSLVSE 10
VHQPH V E
Sbjct: 920 VHQPHRGVIE 929


>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 1 VHQPHSLVSE 10
VHQPH V E
Sbjct: 944 VHQPHRGVIE 953


>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9

Query: 1 VHQPHSLVSE 10
VHQPH V E
Sbjct: 919 VHQPHRGVIE 928


>sp|CAPSH_ADECR|HEXON protein|Canine adenovirus serotype 1 (strain

Query: 1 VHQPHSLVSE 10
VHQPH V E
Sbjct: 881 VHQPHRGVIE 890


>sp|CAPSH_ADECC|HEXON protein|Canine adenovirus serotype 1 (strain

Query: 1 VHQPHSLVSE 10
VHQPH V E
Sbjct: 881 VHQPHRGVIE 890


>sp|REPL_BPP1|REPLICATION protein repL|Escherichia phage P1 (Bacteriophage P1)

Query: 1 VHQPHSLVS 9
+H+PH L++
Sbjct: 55 IHKPHRLIA 63


>sp|CAPSH_ADEP3|HEXON protein|Porcine adenovirus A serotype 3

Query: 1 VHQPHSLVSE 10
VHQPH V E
Sbjct: 915 VHQPHRGVIE 924


>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12

Query: 1 VHQPHSLVSE 10
+HQPH V E
Sbjct: 895 IHQPHRGVIE 904


>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41

Query: 1 VHQPHSLVSE 10
+HQPH V E
Sbjct: 901 IHQPHRGVIE 910


>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40

Query: 1 VHQPHSLVSE 10
+HQPH V E
Sbjct: 899 IHQPHRGVIE 908


>sp|CAPSH_ADEB3|HEXON protein|Bovine adenovirus B serotype 3

Query: 1 VHQPHSLVSE 10
VHQPH V E
Sbjct: 887 VHQPHRGVIE 896


>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 1 VHQPHSLVSE 10
VH+ HS++S+
Sbjct: 553 VHEEHSIISK 562


>sp|CAPSH_ADEM1|HEXON protein|Murine adenovirus A serotype 1

Query: 1 VHQPHSLVSE 10
+HQPH + E
Sbjct: 885 IHQPHRGIIE 894


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 4 PHSLVSE 10
PHSLV+E
Sbjct: 1144 PHSLVAE 1150


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 4 PHSLVSE 10
PHSLV+E
Sbjct: 1144 PHSLVAE 1150


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 4 PHSLVSE 10
PHSLV+E
Sbjct: 1144 PHSLVAE 1150


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 4 PHSLVSE 10
PHSLV+E
Sbjct: 1144 PHSLVAE 1150


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 4 PHSLVSE 10
PHSLV+E
Sbjct: 1144 PHSLVAE 1150


>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 HQPHSL 7
H PHSL
Sbjct: 90 HSPHSL 95


>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 HQPHSL 7
H PHSL
Sbjct: 90 HSPHSL 95


>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 HQPHSL 7
H PHSL
Sbjct: 89 HSPHSL 94


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 VHQPH 5
+HQPH
Sbjct: 1322 IHQPH 1326




8|Sequence|36|45|SLVSEGFTVK

>sp|V51K_BPL79|51.5 kDa protein|Lactococcus phage (isolate 7-9) (Lactococcus

Query: 2 LVSEGFTV 9
L+SEGF V
Sbjct: 247 LISEGFDV 254


>sp|VF125_ASFWA|UNCHARACTERIZED protein B125R|African swine fever virus (isolate

Query: 1 SLVSEGFTVK 10
SL GFTVK
Sbjct: 67 SLEERGFTVK 76


>sp|VF125_ASFP4|UNCHARACTERIZED protein B125R|African swine fever virus (isolate

Query: 1 SLVSEGFTVK 10
SL GFTVK
Sbjct: 67 SLEERGFTVK 76


>sp|VF125_ASFM2|UNCHARACTERIZED protein B125R|African swine fever virus (isolate

Query: 1 SLVSEGFTVK 10
SL GFTVK
Sbjct: 67 SLEERGFTVK 76


>sp|VF125_ASFK5|UNCHARACTERIZED protein B125R|African swine fever virus (isolate

Query: 1 SLVSEGFTVK 10
SL GFTVK
Sbjct: 67 SLEERGFTVK 76


>sp|VF125_ASFB7|UNCHARACTERIZED protein B125R|African swine fever virus (strain

Query: 1 SLVSEGFTVK 10
SL GFTVK
Sbjct: 67 SLEERGFTVK 76


>sp|V219_FOWPN|PUTATIVE ankyrin repeat protein FPV219|Fowlpox virus (strain NVSL) (FPV)

Query: 1 SLVSEGFTV 9
SL+S+ FTV
Sbjct: 385 SLISKSFTV 393




9|Sequence|41|50|GFTVKAMMKN

>sp|DPOL_TNAVC|DNA polymerase|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 1 GFTVKAMMKN 10
GFT+K MKN
Sbjct: 870 GFTLKPSMKN 879


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 1 GFTVKAMMK 9
GFTVKA K
Sbjct: 338 GFTVKAHQK 346




10|Sequence|46|55|AMMKNSVVRG

>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 KNSVVRG 10
KNSV+RG
Sbjct: 4 KNSVLRG 10


>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4 KNSVVRG 10
KNSV+RG
Sbjct: 4 KNSVLRG 10




11|Sequence|51|60|SVVRGPPAAG

>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 SVVRGPPAA 9
S++RGPP A
Sbjct: 6567 SMIRGPPRA 6575


Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5576 VQGPPGTG 5583


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 SVVRGPPAA 9
S++RGPP A
Sbjct: 6567 SMIRGPPRA 6575


Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5576 VQGPPGTG 5583


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 SVVRGPPAA 9
S++RGPP A
Sbjct: 6567 SMIRGPPRA 6575


Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5576 VQGPPGTG 5583


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 2 VVRGPPAAG 10
V+ GPP AG
Sbjct: 1208 VIHGPPGAG 1216


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 SVVRGPPAAG 10
+ V+GPP +G
Sbjct: 5148 TTVQGPPGSG 5157


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 SVVRGPPAAG 10
+ V+GPP +G
Sbjct: 5146 TTVQGPPGSG 5155


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 SVVRGPPAAG 10
+ V+GPP +G
Sbjct: 5146 TTVQGPPGSG 5155


>sp|YL872_MIMIV|UNCHARACTERIZED protein L872|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 VVRGPPAAG 10
++ GPPA+G
Sbjct: 69 ILYGPPASG 77


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 SVVRGPPAA 9
S+++GPP A
Sbjct: 6567 SMIKGPPRA 6575


Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5576 VQGPPGTG 5583


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 SVVRGPPAA 9
S+++GPP A
Sbjct: 6567 SMIKGPPRA 6575


Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5576 VQGPPGTG 5583


>sp|DNBI_MUHVS|MAJOR DNA-binding protein|Murid herpesvirus 1 (strain Smith)

Query: 2 VVRGPPAAG 10
V GPPA G
Sbjct: 552 VAAGPPAGG 560


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 SVVRGPPAAG 10
+ V+GPP G
Sbjct: 5443 TTVQGPPGTG 5452


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5590 VQGPPGTG 5597


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5667 VQGPPGTG 5674


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5661 VQGPPGTG 5668


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5609 VQGPPGTG 5616


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5614 VQGPPGTG 5621


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5634 VQGPPGTG 5641


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5664 VQGPPGTG 5671


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5681 VQGPPGTG 5688


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5634 VQGPPGTG 5641


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 3 VRGPPAAG 10
V+GPP G
Sbjct: 5641 VQGPPGTG 5648


>sp|MYC_AVIMH|VIRAL myc transforming protein|Avian retrovirus MH2

Query: 4 RGPPAAG 10
RGPP AG
Sbjct: 202 RGPPGAG 208


>sp|MYC_AVIME|VIRAL myc transforming protein|Avian retrovirus MH2E21

Query: 4 RGPPAAG 10
RGPP AG
Sbjct: 202 RGPPGAG 208




12|Sequence|56|65|PPAAGAFKER

>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 1 PPAAGAFKER 10
PP AGA K R
Sbjct: 466 PPGAGAPKSR 475


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 1 PPAAGAFKER 10
PP AGA K R
Sbjct: 467 PPGAGAPKTR 476


>sp|055L_FRG3G|PUTATIVE helicase 055L|Frog virus 3 (isolate Goorha)

Query: 1 PPAAGAFKER 10
PPA GA +ER
Sbjct: 47 PPAHGAARER 56


>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1 PPAAGAF 7
PPA+GA+
Sbjct: 197 PPASGAY 203


>sp|RDRP_QRFVE|RNA-DIRECTED RNA polymerase catalytic subunit|Quaranfil virus (isolate

Query: 2 PAAGAFKE 9
P+A AFKE
Sbjct: 159 PSAAAFKE 166


>sp|TGB1_FXMV|MOVEMENT and silencing protein TGBp1|Foxtail mosaic virus

Query: 1 PPAAGAF 7
PP AGA+
Sbjct: 73 PPVAGAY 79


>sp|VNS2_BTV1S|NON-STRUCTURAL protein NS2|Bluetongue virus 1 (isolate South

Query: 1 PPAAGAF 7
PPA+G F
Sbjct: 295 PPASGGF 301




13|Sequence|61|70|AFKERPTKPT

>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 AFKERPTKP 9
AF+ERP P
Sbjct: 660 AFQERPRSP 668


>sp|1ATF_PRRSS|TRUNCATED polyprotein 1aTF|Porcine reproductive and respiratory syndrome

Query: 1 AFKERPTKP 9
AF+ERP P
Sbjct: 660 AFQERPRSP 668


>sp|PHOSP_HMPVC|PHOSPHOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)

Query: 5 RPTKPT 10
RPTKPT
Sbjct: 57 RPTKPT 62


>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)

Query: 1 AFKERPTKPT 10
AF++R +PT
Sbjct: 59 AFEQRKNRPT 68


>sp|CAPSD_MEVA|CAPSID protein VP1|Mink enteritis virus (strain Abashiri)

Query: 4 ERPTKPT 10
RPTKPT
Sbjct: 101 SRPTKPT 107


>sp|CAPSD_PAVC7|CAPSID protein VP1|Canine parvovirus type 2 (strain

Query: 4 ERPTKPT 10
RPTKPT
Sbjct: 106 SRPTKPT 112


>sp|CAPSD_PAVCN|CAPSID protein VP1|Canine parvovirus type 2 (isolate

Query: 4 ERPTKPT 10
RPTKPT
Sbjct: 106 SRPTKPT 112


>sp|CAPSD_FPV19|CAPSID protein VP1|Feline panleukopenia virus (strain 193)

Query: 4 ERPTKPT 10
RPTKPT
Sbjct: 106 SRPTKPT 112




14|Sequence|66|75|PTKPTAFRKF

>sp|CAPSD_PAVPN|CAPSID protein VP1|Porcine parvovirus (strain NADL-2) (PPV)

Query: 1 PTKPTAFRKF 10
PTKPT +R +
Sbjct: 352 PTKPTQYRYY 361


>sp|CAPSD_PAVPK|CAPSID protein VP1|Porcine parvovirus (strain Kresse) (PPV)

Query: 1 PTKPTAFRKF 10
PTKPT +R +
Sbjct: 352 PTKPTQYRYY 361


>sp|CAPSD_PAVP9|CAPSID protein VP1|Porcine parvovirus (strain 90HS) (PPV)

Query: 1 PTKPTAFRKF 10
PTKPT +R +
Sbjct: 352 PTKPTQYRYY 361


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 TKPTAFRKF 10
T+PTAFR F
Sbjct: 368 TEPTAFRIF 376


>sp|1ATF_PRRSS|TRUNCATED polyprotein 1aTF|Porcine reproductive and respiratory syndrome

Query: 2 TKPTAFRKF 10
T+PTAFR F
Sbjct: 368 TEPTAFRIF 376


>sp|FIBER_LAMBD|TAIL fiber protein|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 PTKPTAFR 8
PT PTA R
Sbjct: 406 PTAPTALR 413




15|Sequence|71|80|AFRKFYERGD

>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 2 FRKFYER 8
FR+FY+R
Sbjct: 84 FRRFYDR 90


>sp|CAPSD_CPVKS|CAPSID protein|Cryptosporidium parvum virus 1 (strain

Query: 2 FRKFYER 8
FRK YER
Sbjct: 230 FRKVYER 236


>sp|TNPA_BPMU|DDE-RECOMBINASE A|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 AFRKFYER 8
AFRK YER
Sbjct: 199 AFRKCYER 206


>sp|NMT_MIMIV|PUTATIVE glycylpeptide N-tetradecanoyltransferase|Acanthamoeba polyphaga

Query: 2 FRKFYERG 9
FR FY+ G
Sbjct: 316 FRNFYDNG 323


>sp|POL1_BBWV2|RNA1 polyprotein|Broad bean wilt virus 2

Query: 2 FRKFYERGD 10
FR+ YE+G+
Sbjct: 1805 FRQAYEKGN 1813


>sp|RPO5_MIMIV|DNA-DIRECTED RNA polymerase subunit 5|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 AFRKFYERGD 10
AF+ ERGD
Sbjct: 50 AFKNMEERGD 59


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 2 FRKFYER 8
F KFYE+
Sbjct: 909 FEKFYEK 915


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 2 FRKFYER 8
F KFYE+
Sbjct: 909 FEKFYEK 915


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 FRKFYER 8
F KFYE+
Sbjct: 909 FEKFYEK 915


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 2 FRKFYER 8
F KFYE+
Sbjct: 909 FEKFYEK 915


>sp|RP147_VACCW|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Western Reserve)

Query: 2 FRKFYER 8
F KFYE+
Sbjct: 909 FEKFYEK 915


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2 FRKFYER 8
F KFYE+
Sbjct: 909 FEKFYEK 915


>sp|YR380_MIMIV|PUTATIVE leucine-rich repeat protein R380|Acanthamoeba polyphaga mimivirus

Query: 2 FRKFYE 7
F+KFYE
Sbjct: 395 FKKFYE 400


>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain

Query: 1 AFRKFYER 8
AF++FY+R
Sbjct: 485 AFQEFYDR 492


>sp|YR429_MIMIV|PUTATIVE transcription factor R429|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 FRKFYE 7
+RKFYE
Sbjct: 325 YRKFYE 330




16|Sequence|76|85|YERGDFPIAL

>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)

Query: 2 ERGDFP 7
ERGDFP
Sbjct: 252 ERGDFP 257


>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 ERGDFP 7
ERGDFP
Sbjct: 252 ERGDFP 257


>sp|PIF1_NPVAC|PER os infectivity factor 1|Autographa californica nuclear polyhedrosis

Query: 1 YERGDFPIAL 10
Y RGD P AL
Sbjct: 476 YPRGDAPAAL 485


>sp|TERM_BPPZA|DNA terminal protein|Bacillus phage PZA (Bacteriophage PZA)

Query: 1 YERGDFPIAL 10
Y RGDF ++L
Sbjct: 254 YRRGDFDLSL 263


>sp|TERM_BPPH2|PRIMER terminal protein|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 1 YERGDFPIAL 10
Y RGDF ++L
Sbjct: 254 YRRGDFDLSL 263


>sp|SHUT_ADEG1|SHUTOFF protein|Fowl adenovirus A serotype 1

Query: 1 YERGDFPIA 9
Y+ G FPIA
Sbjct: 867 YQDGQFPIA 875


>sp|PORTL_BPKMV|PORTAL protein|Pseudomonas phage phiKMV

Query: 1 YERGDF 6
YERGD+
Sbjct: 318 YERGDY 323


>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)

Query: 1 YERGDFP 7
+ RGDFP
Sbjct: 1340 FGRGDFP 1346


>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)

Query: 4 GDFPIA 9
GDFP+A
Sbjct: 236 GDFPLA 241


>sp|VF295_IIV3|UNCHARACTERIZED protein 016R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 YERGDFPI 8
++R DFP+
Sbjct: 735 WDRNDFPV 742




17|Sequence|81|90|FPIALEHDSK

>sp|ME53_NPVAC|EARLY 53 kDa protein|Autographa californica nuclear polyhedrosis virus

Query: 1 FPIALEHDSK 10
FP++LEH ++
Sbjct: 245 FPVSLEHTTE 254


>sp|L_SV41|RNA-DIRECTED RNA polymerase L|Simian virus 41 (SV41)

Query: 1 FPIALEHDSK 10
+P+ ++HDS+
Sbjct: 1759 YPLPVDHDSQ 1768


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 1 FPIALEHDSK 10
+P+ ++HDS+
Sbjct: 1754 YPLPVDHDSQ 1763


>sp|POL2_GCMV|RNA2 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 1 FPIALEH 7
+PI+LEH
Sbjct: 985 YPISLEH 991


>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus

Query: 1 FPIALEHDSK 10
F ALEHD +
Sbjct: 202 FMTALEHDKR 211


>sp|RDRP_CLBVS|RNA replication polyprotein|Citrus leaf blotch virus (isolate

Query: 1 FPIALEH 7
FPI++EH
Sbjct: 325 FPISIEH 331


>sp|MVP_RDVA|MOVEMENT protein|Rice dwarf virus (isolate Akita)

Query: 3 IALEHDSK 10
++LEHDS+
Sbjct: 467 LSLEHDSR 474


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 1 FPIALEHDS 9
FP+A HDS
Sbjct: 2095 FPVAEIHDS 2103


>sp|POLG_SVV1|GENOME polyprotein|Seneca Valley virus (isolate -/United

Query: 2 PIALEHDS 9
P+AL HD+
Sbjct: 1131 PVALAHDA 1138




18|Sequence|86|95|EHDSKGNKIA

>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2 HDSKGNKI 9
HD+ GN++
Sbjct: 2797 HDASGNRV 2804


>sp|FIB37_BPT2|LONG tail fiber protein Gp37|Enterobacteria phage T2 (Bacteriophage T2)

Query: 3 DSKGNKI 9
DSKGNKI
Sbjct: 1304 DSKGNKI 1310


>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1

Query: 3 DSKGNKI 9
D KGNKI
Sbjct: 365 DGKGNKI 371


>sp|FIB37_BPK3|LONG tail fiber protein Gp37|Enterobacteria phage K3 (Bacteriophage K3)

Query: 3 DSKGNKI 9
DSKGNKI
Sbjct: 1206 DSKGNKI 1212


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 3 DSKGNKI 9
D+KGNKI
Sbjct: 1719 DNKGNKI 1725


>sp|CAPSD_AADNV|CAPSID protein VP1/VP2|Aedes albopictus densovirus (isolate

Query: 1 EHDSKGNK 8
EHD +G K
Sbjct: 8 EHDGRGTK 15


>sp|POXIN_VACCC|POXIN virus (strain Copenhagen) (VACV)

Query: 2 HDSKGNKIA 10
HD +GN+I+
Sbjct: 82 HDQEGNQIS 90


>sp|POXIN_VACCA|POXIN virus (strain Ankara) (VACV)

Query: 2 HDSKGNKIA 10
HD +GN+I+
Sbjct: 82 HDQEGNQIS 90


>sp|POXIN_VACCW|POXIN virus (strain Western Reserve)

Query: 2 HDSKGNKIA 10
HD +GN+I+
Sbjct: 82 HDQEGNQIS 90




19|Sequence|91|100|GNKIAWKVEI

>sp|Y05A_BPT4|UNCHARACTERIZED 39.7 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 GNKIAWK 7
GNK AWK
Sbjct: 259 GNKDAWK 265


>sp|NCTSP_BPN4|NON-CONTRACTILE tail sheath|Enterobacteria phage N4 (Bacteriophage N4)

Query: 1 GNKIAWKVEI 10
G+ + W+VEI
Sbjct: 1311 GDAVQWQVEI 1320


>sp|POL_COYMV|POLYPROTEIN P3|Commelina yellow mottle virus (CoYMV)

Query: 1 GNKIAW 6
G+KIAW
Sbjct: 662 GDKIAW 667


>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 2 NKIAWK 7
NK+AW+
Sbjct: 384 NKVAWR 389


>sp|MVP_PSBMV|P3N-PIPO polyprotein|Pea seed-borne mosaic virus (strain

Query: 2 NKIAWK 7
NK+AW+
Sbjct: 384 NKVAWR 389


>sp|P4_PBCV1|MINOR capsid protein P4|Paramecium bursaria Chlorella virus 1

Query: 1 GNKIAWKVEI 10
+++ WK+E+
Sbjct: 138 ADELGWKIEV 147




20|Sequence|96|105|WKVEIEKLDY

>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)

Query: 1 WKVEIEKL 8
WK+E+EK+
Sbjct: 122 WKLELEKI 129


>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 WKVEIEKL 8
WK+E+EK+
Sbjct: 121 WKLELEKI 128


>sp|VP2_POVLY|MINOR capsid protein VP2|B-lymphotropic polyomavirus (LPV)

Query: 1 WKVEIEKLD 9
W+VE+ KL+
Sbjct: 305 WEVELNKLE 313


Query: 1 WKVEIEKLD 9
W +EIE +D
Sbjct: 44 WLIEIEAVD 52


>sp|LTP_ALHV1|LARGE tegument protein deneddylase|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 WKVEIEKLD 9
W ++IE LD
Sbjct: 2231 WIIDIEDLD 2239


>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United

Query: 1 WKVEIEKLDY 10
WK+ IEK Y
Sbjct: 192 WKIIIEKACY 201


>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)

Query: 1 WKVEIEKL 8
WK EI+KL
Sbjct: 1581 WKAEIDKL 1588


>sp|YR818_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R818|Acanthamoeba

Query: 1 WKVEIEKLDY 10
W+V+ +LD+
Sbjct: 786 WEVDFHELDF 795




21|Sequence|101|110|EKLDYHHYLP

>sp|L_MMVR|RNA-DIRECTED RNA polymerase L|Maize mosaic virus (isolate Maize/United

Query: 2 KLDYHH 7
KLDYHH
Sbjct: 1343 KLDYHH 1348


>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)

Query: 2 KLDYHHYL 9
KLDYHH +
Sbjct: 1344 KLDYHHQI 1351


>sp|VP2_CAVCI|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 2 KLDYHHYLP 10
KLDYH+ P
Sbjct: 138 KLDYHYSQP 146


>sp|VP2_CAVCA|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 2 KLDYHHYLP 10
KLDYH+ P
Sbjct: 138 KLDYHYSQP 146


>sp|VP2_CAVC1|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 2 KLDYHHYLP 10
KLDYH+ P
Sbjct: 138 KLDYHYSQP 146


>sp|VP2_CAV82|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 2 KLDYHHYLP 10
KLDYH+ P
Sbjct: 138 KLDYHYSQP 146


>sp|VP2_CAV26|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 2 KLDYHHYLP 10
KLDYH+ P
Sbjct: 138 KLDYHYSQP 146


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3 LDYHHYLP 10
+DY HY P
Sbjct: 1970 IDYKHYTP 1977


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 LDYHHYLP 10
+DY HY P
Sbjct: 1970 IDYKHYTP 1977


>sp|5052R_ASFM2|PROTEIN MGF 505-2R|African swine fever virus (isolate

Query: 4 DYHHYLP 10
DYHH LP
Sbjct: 106 DYHHILP 112


>sp|5052R_ASFK5|PROTEIN MGF 505-2R|African swine fever virus (isolate

Query: 4 DYHHYLP 10
DYHH LP
Sbjct: 106 DYHHILP 112


>sp|VG01_ICHVA|UNCHARACTERIZED protein ORF1|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 KLDYHHYL 9
KL YH YL
Sbjct: 514 KLTYHQYL 521


>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 YHHYL 9
YHHYL
Sbjct: 284 YHHYL 288


>sp|VP2_POVLY|MINOR capsid protein VP2|B-lymphotropic polyomavirus (LPV)

Query: 4 DYHHYLP 10
DY+ YLP
Sbjct: 216 DYYRYLP 222


>sp|1A_PZSVT|REPLICATION protein 1a|Pelargonium zonate spot virus (isolate

Query: 3 LDYHH 7
LDYHH
Sbjct: 397 LDYHH 401


>sp|DPOL_TNAVC|DNA polymerase|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 1 EKLDYH 6
EKLDYH
Sbjct: 799 EKLDYH 804


>sp|UL147_HCMVT|PUTATIVE viral CXC chemokine 2|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 EKLDYHHY 8
+KL+YHH+
Sbjct: 148 KKLNYHHF 155


>sp|FIB37_BPAR1|LONG tail fiber protein Gp37|Escherichia phage AR1 (Bacteriophage AR1)

Query: 4 DYHHYL 9
+YHHY
Sbjct: 376 NYHHYF 381


>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate

Query: 3 LDYHHYL 9
++YHH+L
Sbjct: 1 MEYHHFL 7


>sp|RDRP_RGDV|RNA-DIRECTED RNA polymerase P1|Rice gall dwarf virus (RGDV)

Query: 3 LDYHHYLP 10
+DYHH P
Sbjct: 364 VDYHHEHP 371


>sp|DPOL_TUHV2|DNA polymerase catalytic subunit|Tupaiid herpesvirus (strain 2)

Query: 1 EKLDYHH 7
EKL+YH+
Sbjct: 530 EKLNYHY 536


>sp|DPOL_TUHV1|DNA polymerase catalytic subunit|Tupaiid herpesvirus 1 (strain 1)

Query: 1 EKLDYHH 7
EKL+YH+
Sbjct: 530 EKLNYHY 536


>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 KLDYHHYL 9
+ DY HYL
Sbjct: 387 RYDYGHYL 394


>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 KLDYHHYL 9
+ DY HYL
Sbjct: 387 RYDYGHYL 394


>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 KLDYHHYL 9
+ DY HYL
Sbjct: 387 RYDYGHYL 394


>sp|DPOL_GPCMV|DNA polymerase|Guinea pig cytomegalovirus (strain 22122)

Query: 1 EKLDYHH 7
EKL+YH+
Sbjct: 530 EKLNYHY 536


>sp|L_WWAVU|RNA-DIRECTED RNA polymerase L|Whitewater Arroyo mammarenavirus (isolate Rat/United

Query: 1 EKLDYHHYL 9
E L++H+YL
Sbjct: 1351 ELLEFHYYL 1359


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 1 EKLDYHHYLP 10
+ ++YH Y P
Sbjct: 1558 KTIEYHRYRP 1567


>sp|YL717_MIMIV|UNCHARACTERIZED protein L717|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 EKLDYHH 7
EK+DYH+
Sbjct: 129 EKIDYHN 135


>sp|L_TAMVU|RNA-DIRECTED RNA polymerase L|Tamiami mammarenavirus (isolate Rat/United States/W

Query: 1 EKLDYHHYL 9
E L++H+YL
Sbjct: 1353 EILEFHYYL 1361


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 LDYHHYL 9
LDY++YL
Sbjct: 4976 LDYYNYL 4982


>sp|GP41_NPVAC|STRUCTURAL glycoprotein gp41|Autographa californica nuclear polyhedrosis virus

Query: 4 DYHHYL 9
DY+HY+
Sbjct: 284 DYYHYV 289


>sp|YL594_MIMIV|UNCHARACTERIZED protein L594|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 EKLDYHH 7
+K+DYHH
Sbjct: 14 KKIDYHH 20


>sp|DPOL_IIV3|DNA polymerase 120R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 KLDYHHYL 9
KLDY +YL
Sbjct: 990 KLDYLYYL 997


>sp|V206_FOWPN|G-PROTEIN coupled receptor homolog FPV206|Fowlpox virus (strain NVSL) (FPV)

Query: 2 KLDYHHYL 9
K+DY++Y
Sbjct: 72 KIDYYYYF 79


>sp|L_BCNVU|RNA-DIRECTED RNA polymerase L|Bear Canyon mammarenavirus (isolate Mouse/United

Query: 1 EKLDYHHYL 9
E L++H+YL
Sbjct: 1348 EVLEFHNYL 1356




22|Sequence|106|115|HHYLPLFFDG

>sp|MAF_AVIS4|TRANSFORMING protein Maf|Avian musculoaponeurotic fibrosarcoma virus AS42

Query: 1 HHYLPLFFDG 10
HH LP FDG
Sbjct: 122 HHPLPGAFDG 131


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 4 LPLFFDG 10
LPL+FDG
Sbjct: 786 LPLYFDG 792


>sp|CAP3_ADEG1|PRE-HEXON-LINKING protein IIIa|Fowl adenovirus A serotype 1

Query: 2 HYLPLFFDG 10
H LP+ FDG
Sbjct: 467 HRLPVAFDG 475


>sp|YR598_MIMIV|PUTATIVE ankyrin repeat protein R598|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 HHYLPLF 7
H+YLPL+
Sbjct: 152 HNYLPLY 158


>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus

Query: 2 HYLPLF 7
HY+PLF
Sbjct: 551 HYVPLF 556


>sp|CAPSD_HV19S|MAJOR capsid protein|Helminthosporium victoriae virus-190S (Hv190SV)

Query: 3 YLPLFFDG 10
+ P FFDG
Sbjct: 326 WFPTFFDG 333


>sp|BXD_CBDP|BOTULINUM neurotoxin type D|Clostridium botulinum D phage (Clostridium

Query: 2 HYLPLF 7
HYLP+F
Sbjct: 379 HYLPVF 384


>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca

Query: 1 HHYLPLFFDG 10
H YLPLF G
Sbjct: 1782 HIYLPLFGAG 1791


>sp|P17_ASFM2|MINOR capsid protein p17|African swine fever virus (isolate

Query: 1 HHYLPLFF 8
HH+ P+FF
Sbjct: 85 HHHFPVFF 92


>sp|P17_ASFWA|MINOR capsid protein p17|African swine fever virus (isolate

Query: 1 HHYLPLFF 8
HH+ P+FF
Sbjct: 85 HHHFPVFF 92


>sp|P17_ASFP4|MINOR capsid protein p17|African swine fever virus (isolate

Query: 1 HHYLPLFF 8
HH+ P+FF
Sbjct: 85 HHHFPVFF 92


>sp|P17_ASFB7|MINOR capsid protein p17|African swine fever virus (strain

Query: 1 HHYLPLFF 8
HH+ P+FF
Sbjct: 85 HHHFPVFF 92


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 1 HHYLPLFFDG 10
H YLPLF G
Sbjct: 1782 HIYLPLFGAG 1791


>sp|RPOL_BPT7|T7 RNA polymerase|Escherichia phage T7 (Bacteriophage T7)

Query: 4 LPLFFDG 10
LPL FDG
Sbjct: 532 LPLAFDG 538


>sp|RPOL_BPT3|DNA-DIRECTED RNA polymerase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 4 LPLFFDG 10
LPL FDG
Sbjct: 533 LPLAFDG 539


>sp|RPOL_BPK11|DNA-DIRECTED RNA polymerase|Enterobacteria phage K11 (Bacteriophage K11)

Query: 4 LPLFFDG 10
LPL FDG
Sbjct: 555 LPLAFDG 561


>sp|P29_CILVC|P29 leprosis virus C (isolate

Query: 2 HYLPLFFDG 10
HY+ +FF G
Sbjct: 185 HYIVVFFPG 193


>sp|5052R_ASFK5|PROTEIN MGF 505-2R|African swine fever virus (isolate

Query: 1 HHYLPLFFDG 10
HH LPL D
Sbjct: 108 HHILPLIQDA 117


>sp|YL381_MIMIV|UNCHARACTERIZED protein L381|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 HHYLPLFFD 9
HH +FFD
Sbjct: 204 HHKFLIFFD 212


>sp|5052R_ASFM2|PROTEIN MGF 505-2R|African swine fever virus (isolate

Query: 1 HHYLPLFFDG 10
HH LPL D
Sbjct: 108 HHILPLIQDA 117


>sp|VIF_SIVTA|VIRION infectivity factor|Simian immunodeficiency virus AGM.tantalus

Query: 2 HYLPLFFD 9
HY P F D
Sbjct: 113 HYFPCFTD 120


>sp|GLYCO_KHUV|GLYCOPROTEIN virus (KHUV)

Query: 1 HHYLPLFFDG 10
HH+ +FF+G
Sbjct: 372 HHHNGVFFNG 381


>sp|NSS_TSWVL|NON-STRUCTURAL protein NS-S|Tomato spotted wilt virus (strain

Query: 1 HHYLPLFFD 9
H Y+P+F D
Sbjct: 76 HVYIPIFDD 84


>sp|NSS_TSWV1|NON-STRUCTURAL protein NS-S|Tomato spotted wilt virus (strain

Query: 1 HHYLPLFFD 9
H Y+P+F D
Sbjct: 76 HVYIPIFDD 84


>sp|VP2_BTV1A|OUTER capsid protein VP2|Bluetongue virus 1 (isolate Australia)

Query: 2 HYLPLFF 8
++LPLFF
Sbjct: 740 NFLPLFF 746


>sp|P17_ASFK5|MINOR capsid protein p17|African swine fever virus (isolate

Query: 1 HHYLPLFF 8
HH+ P+FF
Sbjct: 86 HHHFPVFF 93


>sp|GLYCO_EBLV1|GLYCOPROTEIN bat lyssavirus 1 (strain

Query: 2 HYLPLFFDG 10
HY +FF+G
Sbjct: 373 HYSGIFFNG 381


>sp|CAPSD_BPK21|MAJOR capsid protein|Pseudomonas phage KPP21

Query: 2 HYLPLFFD 9
HY+PL D
Sbjct: 67 HYIPLLDD 74


>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)

Query: 3 YLPLFFDG 10
Y+P FF G
Sbjct: 191 YVPSFFSG 198


>sp|OE66_NPVLS|OCCLUSION-DERIVED virus envelope protein E66|Leucania separata nucleopolyhedrovirus

Query: 1 HHYLPL 6
H+YLPL
Sbjct: 150 HYYLPL 155




23|Sequence|111|120|LFFDGLCEMT

>sp|NCAP_IRKV|NUCLEOPROTEIN virus (IRKV)

Query: 1 LFFDGLC 7
+FF+G+C
Sbjct: 79 VFFEGIC 85


>sp|YR831_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R831|Acanthamoeba polyphaga

Query: 4 DGLCEMT 10
DG+CE T
Sbjct: 1127 DGMCEST 1133


>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)

Query: 2 FFDGLC 7
FDGLC
Sbjct: 250 LFDGLC 255


>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)

Query: 2 FFDGLC 7
FDGLC
Sbjct: 250 LFDGLC 255


>sp|US03_PSHV1|PROTEIN kinase US3 homolog|Psittacid herpesvirus 1 (isolate Amazon

Query: 4 DGLCEMT 10
DG CE+T
Sbjct: 332 DGYCEIT 338


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 FFDGLC 7
F DGLC
Sbjct: 6357 FLDGLC 6362


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 FFDGLC 7
F DGLC
Sbjct: 6353 FLDGLC 6358


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 2 FFDGLC 7
F DGLC
Sbjct: 6301 FLDGLC 6306


>sp|YR843_MIMIV|UNCHARACTERIZED hydrolase R843|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LFFDGLCEM 9
L F G+C M
Sbjct: 214 LHFSGICSM 222




24|Sequence|116|125|LCEMTFPYEF

>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 2 CEMTFP 7
C+MTFP
Sbjct: 815 CDMTFP 820


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2 CEMTFP 7
C+MTFP
Sbjct: 815 CDMTFP 820


>sp|NS1_LDCPR|NON-STRUCTURAL protein 1|Lymantria dispar cypovirus 1 (isolate

Query: 4 MTFPYEF 10
M FP+EF
Sbjct: 129 MQFPFEF 135


>sp|FEN_BPT5|FLAP endonuclease|Escherichia phage T5 (Enterobacteria phage

Query: 1 LCEMTFP 7
LC+ TFP
Sbjct: 114 LCKTTFP 120


>sp|DPO25_BPK64|DEPOLYMERASE, capsule K64-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 3 EMTFPYEF 10
+ T PYEF
Sbjct: 171 QFTVPYEF 178


>sp|Y070_NPVAC|UNCHARACTERIZED 34.4 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 1 LCEMTFPYEF 10
LC T PY+F
Sbjct: 7 LCLKTLPYKF 16


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 3 EMTFPYEF 10
E+T PY F
Sbjct: 477 EITIPYSF 484


>sp|RDRP_MYRV9|RNA-DIRECTED RNA polymerase VP1|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 1 LCEMTFPY 8
LC+M PY
Sbjct: 217 LCDMVRPY 224


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 3 EMTFPYEF 10
E+T PY F
Sbjct: 477 EITIPYSF 484


>sp|ICP46_IIV3|IMMEDIATE-EARLY protein ICP-46 homolog|Invertebrate iridescent virus 3 (IIV-3)

Query: 6 FPYEF 10
FPYEF
Sbjct: 79 FPYEF 83


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1 LCEMTFPYE 9
LCE T YE
Sbjct: 167 LCEDTITYE 175


>sp|Y006_OSHVF|UNCHARACTERIZED protein ORF6|Ostreid herpesvirus 1 (isolate France)

Query: 1 LCEMTFPYEF 10
+C+++ YEF
Sbjct: 421 ICDLSILYEF 430


>sp|I6_FOWPN|TELOMERE-BINDING protein I6 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 LCEMTFPYEF 10
LCE+ + +E+
Sbjct: 253 LCEIVYDFEY 262




25|Sequence|121|130|FPYEFFARQG

>sp|GB_ELHVK|ENVELOPE glycoprotein B|Elephantid herpesvirus 1 (isolate Asian

Query: 1 FPYEFFA 7
+PY+FFA
Sbjct: 229 YPYDFFA 235


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 FPYEFFA 7
+PY FFA
Sbjct: 261 YPYHFFA 267


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 FPYEFFA 7
+PY FFA
Sbjct: 261 YPYHFFA 267


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 FPYEFFA 7
+PY FFA
Sbjct: 261 YPYHFFA 267


>sp|GB_GAHVR|ENVELOPE glycoprotein B|Gallid herpesvirus 2 (strain RB-1b)

Query: 1 FPYEFFA 7
FPY +FA
Sbjct: 215 FPYSYFA 221


>sp|GB_GAHVM|ENVELOPE glycoprotein B|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 FPYEFFA 7
FPY +FA
Sbjct: 215 FPYSYFA 221


>sp|GB_MUHVS|ENVELOPE glycoprotein B|Murid herpesvirus 1 (strain Smith)

Query: 2 PYEFF 6
PYEFF
Sbjct: 277 PYEFF 281


>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTTU|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/United

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTSP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Patton/G3P[X]) (RV-A)

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTSH|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/South

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTS1|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTRF|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1])

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTBN|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 FPYEFFARQG 10
PY + AR G
Sbjct: 850 LPYTYIARNG 859


>sp|RDRP_ROTW3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|G7_VARV|ASSEMBLY protein G7|Variola virus

Query: 3 YEFFARQG 10
Y+F AR+G
Sbjct: 218 YDFLARKG 225


>sp|G7_VAR67|ASSEMBLY protein G7|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 YEFFARQG 10
Y+F AR+G
Sbjct: 218 YDFLARKG 225


>sp|G7_VACCW|ASSEMBLY protein G7|Vaccinia virus (strain Western Reserve)

Query: 3 YEFFARQG 10
Y+F AR+G
Sbjct: 218 YDFLARKG 225


>sp|G7_VACCC|ASSEMBLY protein G7|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 YEFFARQG 10
Y+F AR+G
Sbjct: 218 YDFLARKG 225


>sp|G7_VACCA|ASSEMBLY protein G7|Vaccinia virus (strain Ankara) (VACV)

Query: 3 YEFFARQG 10
Y+F AR+G
Sbjct: 218 YDFLARKG 225


>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTBU|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|NCAP_PIRYV|NUCLEOPROTEIN virus (PIRYV)

Query: 1 FPYEFFAR 8
FP E+FA+
Sbjct: 27 FPAEYFAK 34


>sp|RDRP_ROTPG|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Pig/United

Query: 1 FPYEFFARQ 9
PYE+F Q
Sbjct: 465 LPYEYFIAQ 473


>sp|DPOL_ADECT|DNA polymerase|Canine adenovirus serotype 2 (strain

Query: 1 FPYEFFARQG 10
FP +F +QG
Sbjct: 154 FPLKFLVKQG 163


>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)

Query: 1 FPYEFFA 7
+P++FFA
Sbjct: 205 YPFDFFA 211


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1 FPYEFFARQG 10
+P EF R+G
Sbjct: 845 YPTEFIMREG 854


>sp|GB_TUHV2|ENVELOPE glycoprotein B|Tupaiid herpesvirus (strain 2) (TuHV-2)

Query: 1 FPYEFFA 7
+PY++FA
Sbjct: 291 YPYDYFA 297


>sp|GB_RHCM6|ENVELOPE glycoprotein B|Rhesus cytomegalovirus (strain 68-1) (RhCMV)

Query: 1 FPYEFF 6
+PY+FF
Sbjct: 236 YPYDFF 241




26|Sequence|126|135|FARQGIHDML

>sp|NCAP_PIRYV|NUCLEOPROTEIN virus (PIRYV)

Query: 1 FARQGIHDML 10
FAR+ +H +L
Sbjct: 402 FARRAVHGIL 411


>sp|MUTSL_MIMIV|PUTATIVE DNA mismatch repair protein|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FARQGIHDML 10
F R+GIH+ L
Sbjct: 519 FFRKGIHEDL 528




27|Sequence|131|140|IHDMLEHGGN

>sp|VPP_BPHC1|PROBABLE terminase, ATPase subunit|Haemophilus phage HP1 (strain HP1c1)

Query: 1 IHDMLEHG 8
+HD++EHG
Sbjct: 527 VHDLVEHG 534


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 3 DMLEHGGN 10
DM++HG N
Sbjct: 1407 DMIQHGNN 1414


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 3 DMLEHGGN 10
DM++HG N
Sbjct: 1407 DMIQHGNN 1414


>sp|POLG_ZYMVR|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 3 DMLEHGGN 10
DM++HG N
Sbjct: 1410 DMIQHGNN 1417


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 3 DMLEHGGN 10
D+LEH GN
Sbjct: 1033 DILEHPGN 1040


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 3 DMLEHGGN 10
D+LEH GN
Sbjct: 1033 DILEHPGN 1040


>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 3 DMLEHGGN 10
DM++HG N
Sbjct: 1407 DMVQHGNN 1414


>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 3 DMLEHGGN 10
DM++HG N
Sbjct: 1410 DMVQHGNN 1417


>sp|5057R_ASFP4|PROTEIN MGF 505-7R|African swine fever virus (isolate

Query: 3 DMLEHGGN 10
++L+HGGN
Sbjct: 254 EILKHGGN 261


>sp|VP4_ROTEO|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 IHDMLEHGG 9
+H +++HGG
Sbjct: 164 LHGIMKHGG 172


>sp|VP4_ROTEH|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Equine/United

Query: 1 IHDMLEHGG 9
+H +++HGG
Sbjct: 164 LHGIMKHGG 172


>sp|VP4_ROTE1|OUTER capsid protein VP4|Rotavirus A (strain RVA/Equine/United

Query: 1 IHDMLEHGG 9
+H +++HGG
Sbjct: 164 LHGIMKHGG 172


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2 HDMLEHGGN 10
H+ L H GN
Sbjct: 478 HEQLPHSGN 486


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 2 HDMLEHGGN 10
H+ L H GN
Sbjct: 478 HEQLPHSGN 486


>sp|5056R_ASFWA|PROTEIN MGF 505-6R|African swine fever virus (isolate

Query: 3 DMLEHGGN 10
+ L+HGGN
Sbjct: 254 ETLKHGGN 261


>sp|5057R_ASFM2|PROTEIN MGF 505-7R|African swine fever virus (isolate

Query: 3 DMLEHGGN 10
+ L+HGGN
Sbjct: 254 ETLKHGGN 261


>sp|RDRP_BPPH6|RNA-DIRECTED RNA polymerase|Pseudomonas phage phi6 (Bacteriophage phi-6)

Query: 1 IHDMLEHG 8
IH++L HG
Sbjct: 642 IHEVLMHG 649


>sp|5054R_ASFM2|PROTEIN MGF 505-4R|African swine fever virus (isolate

Query: 3 DMLEHGGN 10
+ L+HGGN
Sbjct: 249 ETLKHGGN 256


>sp|123R_IIV6|PUTATIVE tyrosine phosphatase 123R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 IHDMLEHG 8
IHD +E+G
Sbjct: 67 IHDSIENG 74




28|Sequence|136|145|EHGGNKILPV

>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 EHGGNKIL 8
EH GNKIL
Sbjct: 1094 EHRGNKIL 1101


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2 HGGNKILP 9
HGG +LP
Sbjct: 95 HGGKHVLP 102


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1 EHGGNKILPV 10
EH GN+I+ V
Sbjct: 1752 EHSGNEIVDV 1761


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1 EHGGNKILPV 10
EH GN+I+ V
Sbjct: 1754 EHSGNEIVDV 1763


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 HGGNKILP 9
HGG +LP
Sbjct: 95 HGGKHVLP 102


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1 EHGGNKILPV 10
EH GN+I+ V
Sbjct: 1756 EHNGNEIVDV 1765


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 1 EHGGNKILPV 10
EH GN+I+ V
Sbjct: 1756 EHNGNEIVDV 1765


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 GGNKILPV 10
GG+++LP+
Sbjct: 3370 GGDRVLPI 3377


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 GGNKILPV 10
GG+++LP+
Sbjct: 3368 GGDRVLPI 3375


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 GGNKILPV 10
GG+++LP+
Sbjct: 3368 GGDRVLPI 3375


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 GGNKILPV 10
GG+++LP+
Sbjct: 3370 GGDRVLPI 3377


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 GGNKILPV 10
GG+++LP+
Sbjct: 3368 GGDRVLPI 3375


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 GGNKILPV 10
GG+++LP+
Sbjct: 3368 GGDRVLPI 3375


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1 EHGGNKILPV 10
EH GN+I+ V
Sbjct: 1755 EHQGNEIVDV 1764


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1 EHGGNKILPV 10
EH GN+I+ V
Sbjct: 1755 EHQGNEIVDV 1764


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1 EHGGNKILPV 10
EH GN+I+ V
Sbjct: 1755 EHQGNEIVDV 1764


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1 EHGGNKILPV 10
EH GN+I+ V
Sbjct: 1755 EHQGNEIVDV 1764


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1 EHGGNKILPV 10
EH GN+I+ V
Sbjct: 1750 EHQGNEIVDV 1759


>sp|VP40_MABVM|MATRIX protein VP40|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 EHGGNKILP 9
+HG N+++P
Sbjct: 21 DHGANQLIP 29


>sp|VP40_MABVA|MATRIX protein VP40|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1 EHGGNKILP 9
+HG N+++P
Sbjct: 21 DHGANQLIP 29


>sp|VP40_MABVO|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1 EHGGNKILP 9
+HG N+++P
Sbjct: 21 DHGANQLIP 29


>sp|VP40_MABVP|MATRIX protein VP40|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 EHGGNKILP 9
+HG N+++P
Sbjct: 21 DHGANQLIP 29


>sp|VP40_MABVR|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1 EHGGNKILP 9
+HG N+++P
Sbjct: 21 DHGANQLIP 29


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 HGGNKILPV 10
H GNK+L V
Sbjct: 952 HQGNKVLKV 960


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1 EHGGNKIL 8
EH GN+I+
Sbjct: 1748 EHSGNEIV 1755


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 2 HGGNKIL 8
H GNK+L
Sbjct: 1874 HAGNKLL 1880


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 HGGNKILPV 10
H GN+IL V
Sbjct: 953 HQGNRILKV 961




29|Sequence|141|150|KILPVLPQLI

>sp|RDRP_PLRVW|PROTEIN P1-P2|Potato leafroll virus (strain

Query: 1 KILPVLPQL 9
K+LPVL QL
Sbjct: 731 KLLPVLTQL 739


>sp|RDRP_PLRV1|PROTEIN P1-P2|Potato leafroll virus (strain Potato/Scotland/strain

Query: 1 KILPVLPQL 9
K+LPVL QL
Sbjct: 731 KLLPVLTQL 739


>sp|RDRP_TYYVF|PROTEIN P1-P2|Turnip yellows virus (isolate FL-1)

Query: 1 KILPVLPQL 9
K+LP+L QL
Sbjct: 702 KLLPILAQL 710


>sp|SPIKE_PEDV7|SPIKE glycoprotein|Porcine epidemic diarrhea virus (strain

Query: 2 ILPVLPQL 9
+LPVLP L
Sbjct: 10 LLPVLPTL 17


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 KILPVLPQL 9
KI+P LP L
Sbjct: 2004 KIMPALPGL 2012


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 KILPVLPQL 9
KI+P LP L
Sbjct: 2004 KIMPALPGL 2012


>sp|206L_IIV6|UNCHARACTERIZED protein 206L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 KILPVLPQ 8
K LPV+PQ
Sbjct: 69 KKLPVIPQ 76




30|Sequence|146|155|LPQLIIPIKN

>sp|MUZZL_BPCA1|MUZZLE protein|Bacteroides phage crAss001 (Bacteroides phage

Query: 3 QLIIPIKN 10
QLI+P+KN
Sbjct: 847 QLILPMKN 854


>sp|VP48_NPVOP|P48 protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 2 PQLIIPIKN 10
P+L++P KN
Sbjct: 266 PKLLMPFKN 274


>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41

Query: 1 LPQLIIP 7
LP+LIIP
Sbjct: 441 LPKLIIP 447


>sp|PRIM_BPT4|DNA primase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 PQLIIPIKN 10
P+L+IPI N
Sbjct: 178 PRLVIPIYN 186




31|Sequence|151|160|IPIKNALNLR

>sp|RPOL_BPK11|DNA-DIRECTED RNA polymerase|Enterobacteria phage K11 (Bacteriophage K11)

Query: 1 IPIKNALNLR 10
+P K LNLR
Sbjct: 887 VPAKGDLNLR 896


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 3 IKNALNL 9
IKNALN+
Sbjct: 2360 IKNALNM 2366


>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 IKNALNLR 10
+KNALN++
Sbjct: 670 VKNALNIQ 677


>sp|VP3_AHSV|CORE protein VP3|African horse sickness virus (AHSV)

Query: 2 PIKNALNL 9
PIKN +NL
Sbjct: 651 PIKNLMNL 658


>sp|VP3_AHSV6|CORE protein VP3|African horse sickness virus 6

Query: 2 PIKNALNL 9
PIKN +NL
Sbjct: 651 PIKNLMNL 658




32|Sequence|156|165|ALNLRNRQVI

***** No hits found ******


33|Sequence|161|170|NRQVICVTLK

***** No hits found ******


34|Sequence|166|175|CVTLKVLQHL

>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 1 CVTLKVLQHL 10
C TL+ LQHL
Sbjct: 1618 CATLETLQHL 1627


>sp|POL_FFV|PRO-POL polyprotein|Feline foamy virus (FFV) (Feline

Query: 3 TLKVLQHL 10
T+KVL HL
Sbjct: 918 TIKVLNHL 925


>sp|Y470_ABVP|UNCHARACTERIZED protein ORF470|Acidianus bottle-shaped virus (isolate

Query: 2 VTLKVLQH 9
+ LK+LQH
Sbjct: 347 IILKILQH 354


>sp|GN_EHV1V|ENVELOPE glycoprotein N|Equine herpesvirus 1 (strain V592)

Query: 2 VTLKVLQHL 10
VTL++LQHL
Sbjct: 91 VTLEMLQHL 99


>sp|GN_EHV1B|ENVELOPE glycoprotein N|Equine herpesvirus 1 (strain Ab4p)

Query: 2 VTLKVLQHL 10
VTL++LQHL
Sbjct: 91 VTLEMLQHL 99




35|Sequence|171|180|VLQHLVVSAE

>sp|BET_FFV|PROTEIN Bet|Feline foamy virus (FFV) (Feline

Query: 1 VLQHLVVSAE 10
VLQHL+ AE
Sbjct: 45 VLQHLIAYAE 54


>sp|P20A_GLRV3|PROTEIN P20A|Grapevine leafroll-associated virus 3 (isolate

Query: 1 VLQHLVVSA 9
VLQHL++S+
Sbjct: 167 VLQHLLISS 175


>sp|CAPSD_BPCP1|MAJOR capsid protein|Streptococcus phage Cp-1 (Bacteriophage Cp-1)

Query: 3 QHLVVSAE 10
Q+LV+SAE
Sbjct: 258 QYLVISAE 265




36|Sequence|176|185|VVSAEMVGKA

>sp|RPB1_IIV6|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 6

Query: 1 VVSAEMVGK 9
+VSAEMV K
Sbjct: 189 IVSAEMVKK 197




37|Sequence|181|190|MVGKALVPYY

>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 1 MVGKALVPY 9
MV KAL PY
Sbjct: 1199 MVVKALTPY 1207


>sp|TMP_BPBMU|PROBABLE tape measure protein|Burkholderia phage BcepMu (isolate -/United

Query: 1 MVGKALVPY 9
+VG+AL+P+
Sbjct: 573 VVGRALLPF 581


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 MVGKALVPYY 10
+VG AL+ YY
Sbjct: 1504 LVGAALLHYY 1513


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 MVGKALVPYY 10
+VG AL+ YY
Sbjct: 1507 LVGAALLHYY 1516


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 1 MVGKALVPY 9
MV KAL PY
Sbjct: 1199 MVVKALSPY 1207


>sp|PG053_SWPVK|EFC-ASSOCIATED protein OPG053|Swinepox virus (strain Kasza) (SWPV)

Query: 2 VGKALVPY 9
VGK + PY
Sbjct: 125 VGKCIAPY 132




38|Sequence|186|195|LVPYYRQILP

>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)

Query: 1 LVPYYRQIL 9
+VPYYR++L
Sbjct: 1933 MVPYYREVL 1941


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 LVPYYRQI 8
LVPYY+ I
Sbjct: 5218 LVPYYQMI 5225


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 LVPYYRQI 8
LVPYY+ I
Sbjct: 5193 LVPYYQMI 5200


>sp|CAPSD_FDVS|INNER capsid protein S2|Fiji disease virus (isolate Sugarcane)

Query: 1 LVPYYRQI 8
L+PYY +I
Sbjct: 131 LIPYYHEI 138


>sp|Y054_NPVOP|UNCHARACTERIZED 42.5 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 3 PYYRQIL 9
PYYRQ+L
Sbjct: 75 PYYRQLL 81


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 LVPYYRQI 8
LVPYY+ I
Sbjct: 5293 LVPYYQLI 5300


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 LVPYYRQI 8
LVPYY+ I
Sbjct: 5236 LVPYYQLI 5243


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 LVPYYRQI 8
LVPYY+ I
Sbjct: 5261 LVPYYQLI 5268


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 LVPYYRQI 8
L+PYY+ I
Sbjct: 5304 LIPYYQLI 5311


>sp|UB222_WSSVS|RING finger containing E3 ubiquitin-protein|White spot syndrome virus

Query: 1 LVPYYRQ 7
++PYYR+
Sbjct: 132 VIPYYRR 138


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 LVPYYRQIL 9
L PYY+Q +
Sbjct: 831 LSPYYKQYM 839


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 LVPYYRQIL 9
L PYY+Q +
Sbjct: 831 LSPYYKQYM 839


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 LVPYYRQIL 9
L PYY++ L
Sbjct: 831 LSPYYKEFL 839


>sp|YL612_MIMIV|UNCHARACTERIZED protein L612|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 PYYRQIL 9
PYYR+++
Sbjct: 21 PYYRRVI 27


>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain

Query: 1 LVPYYRQILP 10
++P+ R+++P
Sbjct: 562 IIPFLRELIP 571


>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)

Query: 1 LVPYYRQILP 10
++P+ R+++P
Sbjct: 562 IIPFLRELIP 571


>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9

Query: 3 PYYRQIL 9
P+YRQI+
Sbjct: 149 PWYRQIV 155




39|Sequence|191|200|RQILPVLNIF

>sp|VP3_BTV17|CORE protein VP3|Bluetongue virus 17 (isolate USA)

Query: 1 RQILPVLN 8
RQIL VLN
Sbjct: 864 RQILAVLN 871


>sp|VP3_BTV1A|CORE protein VP3|Bluetongue virus 1 (isolate Australia)

Query: 1 RQILPVLN 8
RQIL VLN
Sbjct: 864 RQILAVLN 871




40|Sequence|196|205|VLNIFKNMNG

>sp|DCK1_FOWPN|PROBABLE deoxycytidine kinase FPV059|Fowlpox virus (strain NVSL) (FPV)

Query: 1 VLNIFKNMN 9
VLNI +N+N
Sbjct: 25 VLNILRNIN 33


>sp|G_BPAL3|MAJOR spike protein G|Escherichia phage alpha3 (Bacteriophage alpha-3)

Query: 1 VLNIFKNMN 9
V+N++ NMN
Sbjct: 47 VVNLYANMN 55


>sp|YL041_MIMIV|UNCHARACTERIZED protein L41|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VLNIFKNMNG 10
++NIFK ++G
Sbjct: 4 IINIFKILSG 13




41|Sequence|201|210|KNMNGSYSLP

>sp|Y107B_ABVP|UNCHARACTERIZED protein ORF107b|Acidianus bottle-shaped virus (isolate

Query: 1 KNMNGSYSLP 10
+NM S+SLP
Sbjct: 35 ENMKRSFSLP 44


>sp|PORTL_BPSP6|PORTAL protein|Enterobacteria phage SP6 (Bacteriophage SP6)

Query: 1 KNMNGSYSL 9
+NM G YSL
Sbjct: 379 QNMGGVYSL 387


>sp|RDRP_WCCVB|RNA-DIRECTED RNA polymerase|White clover cryptic virus 1

Query: 5 GSYSLP 10
GSYSLP
Sbjct: 25 GSYSLP 30


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 1 KNMNGSY 7
KNM GSY
Sbjct: 184 KNMAGSY 190


>sp|Y470_ABVP|UNCHARACTERIZED protein ORF470|Acidianus bottle-shaped virus (isolate

Query: 2 NMNGSYSLP 10
N NGS S+P
Sbjct: 5 NNNGSLSVP 13


>sp|YL389_MIMIV|UNCHARACTERIZED protein L389|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 MNGSYSLP 10
++G+YSLP
Sbjct: 1023 IDGNYSLP 1030


>sp|Y017_HVAVE|UNCHARACTERIZED protein ORF17|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 2 NMNGSYSLP 10
N+ G YSLP
Sbjct: 304 NVLGDYSLP 312




42|Sequence|206|215|SYSLPRLECS

>sp|VF391_IIV6|UNCHARACTERIZED protein 391R|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 SLPRLECS 10
SLP L+CS
Sbjct: 267 SLPTLKCS 274


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3 SLPRLECS 10
+LPRL C+
Sbjct: 5983 TLPRLHCT 5990


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3 SLPRLECS 10
+LPRL C+
Sbjct: 5933 TLPRLHCT 5940


>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23

Query: 1 SYSLPRLE 8
+YS+PR E
Sbjct: 447 AYSIPRFE 454




43|Sequence|211|220|RLECSGAIMA

>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 RLECSGAIMA 10
+L CSG++ A
Sbjct: 1943 KLACSGSVQA 1952


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 1 RLECSGAIMA 10
+L C+GA+ A
Sbjct: 1918 KLTCNGAVQA 1927


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 RLECSGAIMA 10
+L C+GA+ A
Sbjct: 1918 KLTCNGAVQA 1927


>sp|KITH_MEHV1|THYMIDINE kinase|Meleagrid herpesvirus 1 (MeHV-1) (Turkey

Query: 1 RLECSGAIM 9
R EC+ AIM
Sbjct: 304 RRECASAIM 312




44|Sequence|216|225|GAIMARCNLD

>sp|GLYC_ALLVP|PRE-GLYCOPROTEIN polyprotein GP complex|Allpahuayo mammarenavirus (isolate

Query: 2 AIMARCNLD 10
A+MA+CN D
Sbjct: 309 AVMAKCNKD 317


>sp|GLYC_PIRVV|PRE-GLYCOPROTEIN polyprotein GP complex|Pirital mammarenavirus (isolate

Query: 2 AIMARCNLD 10
++MA+CN D
Sbjct: 312 SVMAKCNKD 320


>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 4 MARCNLD 10
+A+CNLD
Sbjct: 293 LAKCNLD 299


>sp|GLYC_PARVP|PRE-GLYCOPROTEIN polyprotein GP complex|Parana mammarenavirus (isolate

Query: 2 AIMARCNLD 10
++MA+CN D
Sbjct: 309 SVMAKCNKD 317


>sp|GLYC_WWAVU|PRE-GLYCOPROTEIN polyprotein GP complex|Whitewater Arroyo mammarenavirus (isolate

Query: 4 MARCNLD 10
+A+CNLD
Sbjct: 285 IAKCNLD 291


>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind

Query: 3 IMARCNLD 10
+MA+CN D
Sbjct: 311 VMAKCNKD 318


>sp|YPX2_BLVJ|PUTATIVE uncharacterized protein PXBL-II|Bovine leukemia virus (isolate

Query: 1 GAIMARCNLD 10
A M RC+LD
Sbjct: 72 AASMERCSLD 81


>sp|POLG_TAMV|GENOME polyprotein|Tamarillo mosaic virus

Query: 5 ARCNLD 10
+RCNLD
Sbjct: 76 SRCNLD 81


>sp|TGB3_PMTVS|MOVEMENT protein TGB3|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 1 GAIMARC 7
GA++ARC
Sbjct: 184 GAMLARC 190


>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate

Query: 1 GAIMARC 7
GAI+ RC
Sbjct: 211 GAILGRC 217




45|Sequence|221|230|RCNLDHLGSS

>sp|POLG_TAMV|GENOME polyprotein|Tamarillo mosaic virus

Query: 1 RCNLDHLGS 9
RCNLDHL S
Sbjct: 77 RCNLDHLLS 85


>sp|VF93L_ASFB7|UNCHARACTERIZED membrane protein KP93L/DP93R|African swine fever virus (strain

Query: 1 RCNLDH 6
RCN+DH
Sbjct: 8 RCNMDH 13


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 RCNLDHLGSS 10
RC+++H G+S
Sbjct: 4172 RCHIEHPGAS 4181


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 RCNLDHLGSS 10
RC+++H G+S
Sbjct: 4172 RCHIEHPGAS 4181


>sp|RDRP_SSDRV|RNA replication protein|Sclerotinia sclerotiorum

Query: 1 RCNLDH 6
RC+LDH
Sbjct: 523 RCSLDH 528


>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain

Query: 1 RCNLDHLGS 9
RC LD +GS
Sbjct: 444 RCELDLIGS 452


>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate

Query: 1 RCNLDHLGS 9
RC LD +GS
Sbjct: 444 RCELDLIGS 452


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 3 NLDHLGSS 10
N+DH GSS
Sbjct: 2597 NVDHAGSS 2604


>sp|GLYC_WWAVU|PRE-GLYCOPROTEIN polyprotein GP complex|Whitewater Arroyo mammarenavirus (isolate

Query: 1 RCNLDH 6
+CNLDH
Sbjct: 287 KCNLDH 292


>sp|DPOL_NPVOP|DNA polymerase|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 2 CNLDHLGSS 10
CN+ HL SS
Sbjct: 423 CNISHLISS 431


>sp|DPOL_NPVCF|DNA polymerase|Choristoneura fumiferana nuclear polyhedrosis virus

Query: 2 CNLDHLGSS 10
CN+ HL SS
Sbjct: 423 CNISHLISS 431


>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 1 RCNLDH 6
+CNLDH
Sbjct: 295 KCNLDH 300


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 RCNLDH 6
RC++DH
Sbjct: 4331 RCHIDH 4336


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 RCNLDH 6
RC++DH
Sbjct: 4302 RCHIDH 4307


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 RCNLDH 6
RC++DH
Sbjct: 4314 RCHIDH 4319


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 RCNLDH 6
RC++DH
Sbjct: 4331 RCHIDH 4336


>sp|RDRP_AHNNV|RNA-DIRECTED RNA polymerase|Atlantic halibut nervous necrosis virus

Query: 3 NLDHLGSS 10
N DHLG+S
Sbjct: 811 NDDHLGNS 818


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 RCNLDH 6
RC++DH
Sbjct: 4306 RCHIDH 4311


>sp|V226_FOWPN|PROBABLE serine/threonine-protein kinase FPV226|Fowlpox virus (strain

Query: 3 NLDHLG 8
N+DHLG
Sbjct: 76 NIDHLG 81


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 RCNLDH 6
RC++DH
Sbjct: 4308 RCHIDH 4313


>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 1 RCNLDHLG 8
R N DHLG
Sbjct: 575 RDNTDHLG 582


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 RCNLDH 6
RC++DH
Sbjct: 4302 RCHIDH 4307


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 RCNLDH 6
RC++DH
Sbjct: 4314 RCHIDH 4319


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 RCNLDH 6
RC++DH
Sbjct: 4306 RCHIDH 4311


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 RCNLDH 6
RC++DH
Sbjct: 4308 RCHIDH 4313


>sp|P3_RGDV|OUTER capsid protein P3|Rice gall dwarf virus (RGDV)

Query: 3 NLDHLGS 9
NL+H+GS
Sbjct: 967 NLEHVGS 973




46|Sequence|226|235|HLGSSDPPTS

>sp|VG61_ICHVA|UNCHARACTERIZED protein ORF61|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 HLGSSDPPT 9
HLG +D PT
Sbjct: 110 HLGDTDAPT 118


>sp|YL152_MIMIV|UNCHARACTERIZED protein L152|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 GSSDPPTS 10
G+SD PTS
Sbjct: 292 GTSDQPTS 299


>sp|UL24_HHV11|PROTEIN UL24|Human herpesvirus 1 (strain 17)

Query: 1 HLGSSDPPTS 10
H G+ DPP S
Sbjct: 217 HSGARDPPES 226


>sp|YL268_MIMIV|PUTATIVE serine/threonine-protein kinase L268|Acanthamoeba polyphaga

Query: 1 HLGSSDP 7
HLG+ DP
Sbjct: 478 HLGTPDP 484


>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)

Query: 2 LGSSDPPTS 10
+G+SDPP S
Sbjct: 225 VGASDPPIS 233


>sp|SPIKE_BCHK9|SPIKE glycoprotein|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 GSSDPPT 9
GS DPPT
Sbjct: 326 GSFDPPT 332




47|Sequence|231|240|DPPTSASQVA

>sp|ENV_JEMBR|ENVELOPE glycoprotein|Jembrana disease virus (JDV)

Query: 2 PPTSASQV 9
PPT SQV
Sbjct: 221 PPTGISQV 228


>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 PPTSASQV 9
PPTSA+ +
Sbjct: 135 PPTSAASI 142


>sp|YR627_MIMIV|UNCHARACTERIZED protein R627|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PPTSASQV 9
PPT+ SQV
Sbjct: 570 PPTNKSQV 577




48|Sequence|236|245|ASQVAEIIVN

>sp|POL2_CPMVS|RNA2 polyprotein|Cowpea mosaic virus (strain SB)

Query: 1 ASQVAEIIVN 10
SQVAE+ VN
Sbjct: 318 GSQVAEVSVN 327




49|Sequence|241|250|EIIVNSGDGI

>sp|Y13E_BPT4|UNCHARACTERIZED 8.7 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 IIVNSGDG 9
+IVN GDG
Sbjct: 46 VIVNPGDG 53


>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus

Query: 2 IIVNSGDGI 10
I+V GDGI
Sbjct: 167 IVVTEGDGI 175


>sp|CAPSD_BPLC2|MAJOR capsid protein|Lactococcus phage c2

Query: 1 EIIVNSGDGI 10
E I N+GDG+
Sbjct: 24 ESIANAGDGV 33


>sp|Y059_OSHVF|UNCHARACTERIZED protein ORF59|Ostreid herpesvirus 1 (isolate France)

Query: 1 EIIVNSGD 8
E+I NSGD
Sbjct: 392 EVIKNSGD 399


>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5

Query: 2 IIVNSGDGI 10
I +N+GDG+
Sbjct: 336 IAINAGDGL 344


>sp|TRM3_PSHV1|TRIPARTITE terminase subunit 3|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 EIIVNSGDG 9
EI++ SGD
Sbjct: 452 EIVITSGDA 460




50|Sequence|246|255|SGDGIDYSQQ

>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)

Query: 1 SGDGIDYSQ 9
SG+GI YSQ
Sbjct: 427 SGEGITYSQ 435


>sp|HEMA_PHODV|HEMAGGLUTININ glycoprotein|Phocine distemper virus (PDV)

Query: 1 SGDGIDYSQ 9
+GDG+DY +
Sbjct: 433 NGDGMDYYE 441


>sp|HEMA_CDVO|HEMAGGLUTININ glycoprotein|Canine distemper virus (strain Onderstepoort)

Query: 1 SGDGIDYSQ 9
+GDG+DY +
Sbjct: 433 NGDGMDYYE 441


>sp|HEMA_CDVC|HEMAGGLUTININ glycoprotein|Canine distemper virus (strain Convac

Query: 1 SGDGIDYSQ 9
+GDG+DY +
Sbjct: 433 NGDGMDYYE 441


>sp|ITP_EHV1V|INNER tegument protein|Equine herpesvirus 1 (strain V592)

Query: 3 DGIDYSQQ 10
D +DY+QQ
Sbjct: 418 DSLDYAQQ 425


>sp|ITP_EHV1B|INNER tegument protein|Equine herpesvirus 1 (strain Ab4p)

Query: 3 DGIDYSQQ 10
D +DY+QQ
Sbjct: 418 DSLDYAQQ 425


>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 GDGIDY 7
GDG+DY
Sbjct: 296 GDGLDY 301


>sp|HEMA_CDVA4|HEMAGGLUTININ glycoprotein|Canine distemper virus (strain A92-27/4)

Query: 1 SGDGIDYSQ 9
+GDG+DY +
Sbjct: 433 NGDGMDYYE 441


>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 GDGIDY 7
GDG+DY
Sbjct: 296 GDGLDY 301


>sp|YR892_MIMIV|UNCHARACTERIZED protein R892|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GDGIDYSQ 9
GD DYSQ
Sbjct: 217 GDKYDYSQ 224


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 2 GDGIDYSQ 9
GDG+ +SQ
Sbjct: 1129 GDGMQFSQ 1136


>sp|RPO5_MIMIV|DNA-DIRECTED RNA polymerase subunit 5|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 SGDGIDY 7
SG GIDY
Sbjct: 195 SGQGIDY 201


>sp|VP16_EHV1B|TEGUMENT protein VP16 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 3 DGIDYS 8
DG+DYS
Sbjct: 461 DGLDYS 466


>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)

Query: 1 SGDGIDYSQ 9
SG+G+ Y Q
Sbjct: 427 SGEGLTYEQ 435


>sp|RDRP_BBMV|RNA-DIRECTED RNA polymerase 2a|Broad bean mottle virus

Query: 1 SGDGIDYSQ 9
S DG DY Q
Sbjct: 139 SADGSDYHQ 147


>sp|NCAP_OLVVA|NUCLEOPROTEIN mammarenavirus (isolate Mouse/Argentina/RIID 3229/1990)

Query: 3 DGIDYSQ 9
DG+D+SQ
Sbjct: 40 DGLDFSQ 46


>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)

Query: 2 GDGIDYSQ 9
DG+D+SQ
Sbjct: 39 ADGLDFSQ 46


>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)

Query: 3 DGIDYSQ 9
DGIDY +
Sbjct: 374 DGIDYEE 380


>sp|GP16_BPLP2|BASEPLATE protein gp16|Lactococcus phage p2 (Lactococcus lactis

Query: 1 SGDGIDYS 8
+GD IDYS
Sbjct: 268 NGDVIDYS 275


>sp|GP16_BPLSK|BASEPLATE protein gp16|Lactococcus phage SK1 (Lactococcus lactis

Query: 1 SGDGIDYS 8
+GD IDYS
Sbjct: 268 NGDVIDYS 275


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 2 GDGIDYSQ 9
G+G+D+ Q
Sbjct: 863 GEGVDFKQ 870




51|Sequence|251|260|DYSQQKRENI

>sp|AC66_NPVAC|PROTEIN Ac66|Autographa californica nuclear polyhedrosis virus

Query: 1 DYSQQKRENI 10
+++QQK EN+
Sbjct: 362 EFAQQKSENV 371




52|Sequence|256|265|KRENIGDLIQ

>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 1 KRENIGDL 8
K+E IGDL
Sbjct: 1616 KKEKIGDL 1623


>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 3 ENIGDLIQ 10
+NI DLIQ
Sbjct: 85 DNINDLIQ 92


>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 3 ENIGDLIQ 10
+NI DLIQ
Sbjct: 85 DNINDLIQ 92


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1 KRENIGDL 8
K+E +GDL
Sbjct: 1616 KKEKVGDL 1623




53|Sequence|261|270|GDLIQETLEA

>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4

Query: 2 DLIQETLE 9
D+IQETL+
Sbjct: 567 DIIQETLD 574


>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)

Query: 1 GDLIQETLEA 10
GD+I ++LEA
Sbjct: 150 GDMILDSLEA 159


>sp|FIB12_BPPZA|PRENECK appendage protein|Bacillus phage PZA (Bacteriophage PZA)

Query: 2 DLIQETLE 9
DL++ETLE
Sbjct: 74 DLVKETLE 81


>sp|FIB12_BPPH2|PRE-NECK appendage protein|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 2 DLIQETLE 9
DL++ETLE
Sbjct: 74 DLVKETLE 81


>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7

Query: 2 DLIQETL 8
D+IQETL
Sbjct: 497 DIIQETL 503


>sp|OBP_BPT5|PUTATIVE replication origin binding protein|Escherichia phage T5

Query: 1 GDLIQETLEA 10
GD+ ET+EA
Sbjct: 524 GDISAETIEA 533




54|Sequence|266|275|ETLEAFERYG

>sp|YL631_MIMIV|UNCHARACTERIZED protein L631|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ETLEAFERYG 10
ET E+F RYG
Sbjct: 117 ETRESFLRYG 126


>sp|Y137_ATV|UNCHARACTERIZED protein ORF137|Acidianus two-tailed virus (ATV)

Query: 1 ETLEAFERYG 10
ET+E E+YG
Sbjct: 65 ETVEKLEKYG 74


>sp|FIBER_BPK5|TAIL spike protein|Escherichia virus K5 (Bacteriophage K5)

Query: 4 EAFERYG 10
EAFER+G
Sbjct: 559 EAFERHG 565


>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)

Query: 3 LEAFERYG 10
+EAF RYG
Sbjct: 259 VEAFHRYG 266


>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)

Query: 3 LEAFERYG 10
+EAF RYG
Sbjct: 259 VEAFHRYG 266


>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)

Query: 3 LEAFERYG 10
+EAF RYG
Sbjct: 258 VEAFHRYG 265


>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)

Query: 3 LEAFERYG 10
+EAF RYG
Sbjct: 259 VEAFHRYG 266


>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)

Query: 3 LEAFERYG 10
+EAF RYG
Sbjct: 254 VEAFHRYG 261


>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)

Query: 3 LEAFERYG 10
+EAF RYG
Sbjct: 254 VEAFHRYG 261


>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 4 EAFERYG 10
EAFERY
Sbjct: 165 EAFERYA 171


>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2

Query: 3 LEAFERYG 10
+EAF RYG
Sbjct: 240 VEAFHRYG 247


>sp|Y1940_ATV|PROTEIN ORF1940|Acidianus two-tailed virus (ATV)

Query: 1 ETLEAFER 8
ETLE FE+
Sbjct: 1603 ETLERFEK 1610


>sp|HELI_PSHV1|DNA replication helicase|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 TLEAFERY 9
+LEAF++Y
Sbjct: 406 SLEAFDKY 413


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 2 TLEAFERYG 10
T AFE YG
Sbjct: 972 TWHAFEEYG 980


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 2 TLEAFERYG 10
T AFE YG
Sbjct: 970 TWHAFEEYG 978


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 2 TLEAFERYG 10
T AFE YG
Sbjct: 991 TWHAFEEYG 999


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 2 TLEAFERYG 10
T AFE YG
Sbjct: 971 TWHAFEEYG 979


>sp|CVC2_EHV1B|CAPSID vertex component 2|Equine herpesvirus 1 (strain Ab4p)

Query: 1 ETLEAFERYG 10
+TLEA +YG
Sbjct: 70 DTLEAQSQYG 79




55|Sequence|271|280|FERYGGENAF

>sp|Y076_OSHVF|UNCHARACTERIZED protein ORF76|Ostreid herpesvirus 1 (isolate France)

Query: 1 FERYGGEN 8
F+R GGEN
Sbjct: 329 FQRVGGEN 336


>sp|POL_SIVVT|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 RYGGENAF 10
R GGENA+
Sbjct: 667 RVGGENAY 674


>sp|GLYC_TAMVU|PRE-GLYCOPROTEIN polyprotein GP complex|Tamiami mammarenavirus (isolate Rat/United

Query: 2 ERYGGENAF 10
ER GEN+F
Sbjct: 166 ERVSGENSF 174


>sp|ORF35_HHV8P|PROTEIN ORF35|Human herpesvirus 8 type P

Query: 1 FERYGGENA 9
F+R+GG +A
Sbjct: 28 FDRFGGSSA 36


>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)

Query: 3 RYGGENAF 10
RY GEN +
Sbjct: 173 RYAGENIY 180


>sp|POL_SIVV1|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 FERYGGENAF 10
R GG+NA+
Sbjct: 661 LSRVGGDNAY 670


>sp|209R_IIV6|UNCHARACTERIZED protein 209R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 FERYGGENAF 10
F+RYGG F
Sbjct: 105 FKRYGGFEPF 114


>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 RYGGENAF 10
+ GGENA+
Sbjct: 664 KIGGENAY 671


>sp|IKBN2_MDBVW|I-KAPPA-B like protein N2|Microplitis demolitor bracovirus (isolate Webb)

Query: 2 ERYGGENAF 10
E Y GEN F
Sbjct: 21 EAYTGENIF 29


>sp|UL20_EHV1V|PROTEIN UL20 homolog|Equine herpesvirus 1 (strain V592)

Query: 4 YGGENAF 10
YGG+N F
Sbjct: 44 YGGDNDF 50


>sp|UL20_EHV1B|PROTEIN UL20 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 4 YGGENAF 10
YGG+N F
Sbjct: 44 YGGDNDF 50


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 2 ERYGGENAF 10
+ YGG N F
Sbjct: 1335 DEYGGHNDF 1343


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 2 ERYGGENAF 10
+ YGG N F
Sbjct: 1335 DEYGGHNDF 1343


>sp|BPPB3_BPT5|BASEPLATE hub protein pb3|Escherichia phage T5 (Enterobacteria phage

Query: 1 FERYGGENAF 10
+ERYG ++ F
Sbjct: 681 YERYGWKDKF 690




56|Sequence|276|285|GENAFINIKY

>sp|VG39_ICHVA|UNCHARACTERIZED protein ORF39|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 ENAFINIKY 10
EN F+NI Y
Sbjct: 710 ENLFMNIAY 718


>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)

Query: 1 GENAFINIKY 10
G N F+N+ Y
Sbjct: 464 GNNTFVNVCY 473


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 1 GENAFINIKY 10
G N F+N+ Y
Sbjct: 464 GNNTFVNVCY 473


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 1 GENAFINIKY 10
G N F+N+ Y
Sbjct: 464 GNNTFVNVCY 473


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 1 GENAFINIKY 10
G N F+N+ Y
Sbjct: 464 GNNTFVNVCY 473


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 1 GENAFINIKY 10
G N F+N+ Y
Sbjct: 464 GNNTFVNVCY 473


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 1 GENAFINIKY 10
G N F+N+ Y
Sbjct: 464 GNNTFVNVCY 473


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 1 GENAFINIK 9
GENA+I+++
Sbjct: 3221 GENAYISVE 3229


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 GENAFINIK 9
GENA+I+++
Sbjct: 3221 GENAYISVE 3229


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 2 ENAFINIK 9
+NAF+N+K
Sbjct: 6199 KNAFVNLK 6206


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 1 GENAFINIK 9
GENA+I ++
Sbjct: 3346 GENAYIQVE 3354


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 GENAFINIK 9
GENA+I ++
Sbjct: 3346 GENAYIQVE 3354


>sp|YIMA_BPPH1|UNCHARACTERIZED immunity region protein 10|Bacillus phage phi105 (Bacteriophage

Query: 4 AFINIKY 10
AFINIK+
Sbjct: 26 AFINIKF 32




57|Sequence|281|290|INIKYVVPTY

>sp|CVC2_ILTVT|CAPSID vertex component 2|Infectious laryngotracheitis virus (strain

Query: 4 KYVVPTY 10
KYVVP Y
Sbjct: 466 KYVVPMY 472


>sp|RDRP_SCVLB|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-BC

Query: 3 IKYVVPTY 10
+KY+VP Y
Sbjct: 711 VKYIVPLY 718


>sp|Y383A_ATV|TNPB-LIKE protein ORF383a|Acidianus two-tailed virus (ATV)

Query: 1 INIKYVVPTY 10
+N++YV P+Y
Sbjct: 314 MNVEYVNPSY 323


>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)

Query: 5 YVVPTY 10
YVVPTY
Sbjct: 424 YVVPTY 429


>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 5 YVVPTY 10
YV+PTY
Sbjct: 15 YVIPTY 20


>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 5 YVVPTY 10
YV+PTY
Sbjct: 15 YVIPTY 20


>sp|1A_TAV|REPLICATION protein 1a|Tomato aspermy virus (TAV)

Query: 2 NIKYVVPTY 10
N+K+V TY
Sbjct: 629 NVKFVFETY 637


>sp|TSP_BPBMU|TAIL sheath protein|Burkholderia phage BcepMu (isolate -/United

Query: 1 INIKYVVP 8
IN KY VP
Sbjct: 446 INYKYTVP 453


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 1 INIKYVVPT 9
+NI Y+VP+
Sbjct: 1007 LNIDYLVPS 1015


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 1 INIKYVVPT 9
+NI Y+VP+
Sbjct: 1007 LNIDYLVPS 1015


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 1 INIKYVVPT 9
+NI Y+VP+
Sbjct: 1007 LNIDYLVPS 1015


>sp|HEMA_CDVA6|HEMAGGLUTININ glycoprotein|Canine distemper virus (strain A92-6)

Query: 2 NIKYVVPTY 10
N +YV+ TY
Sbjct: 517 NFRYVIATY 525


>sp|ITP_SHV21|INNER tegument protein|Saimiriine herpesvirus 2 (strain 11)

Query: 3 IKYVVPTY 10
I+Y VPTY
Sbjct: 602 IQYYVPTY 609




58|Sequence|286|296|VVPTYESCLLN

>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 2 VPTYESCLLN 11
+PTY+S +LN
Sbjct: 2015 LPTYDSAVLN 2024


>sp|YR588_MIMIV|UNCHARACTERIZED protein R588|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 PTYESCLL 10
P YESC L
Sbjct: 248 PNYESCFL 255


>sp|POLG_TMEVG|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 1 VVPTYESCL 9
VVPTY+S L
Sbjct: 2287 VVPTYDSML 2295


>sp|VP43_NPVAC|43 kDa protein|Autographa californica nuclear polyhedrosis virus

Query: 2 VPTYESCLLN 11
VP YE LLN
Sbjct: 253 VPLYEKLLLN 262


>sp|RPOL_BPT7|T7 RNA polymerase|Escherichia phage T7 (Bacteriophage T7)

Query: 1 VVPTYESC 8
+V TYESC
Sbjct: 832 MVDTYESC 839


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 VVPTYESCL 9
V+PT SCL
Sbjct: 83 VIPTVPSCL 91


>sp|POL_GALV|GAG-POL polyprotein|Gibbon ape leukemia virus (GALV)

Query: 3 PTYESC 8
PTYE C
Sbjct: 869 PTYEDC 874


>sp|POLG_TMEVD|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 1 VVPTYESCL 9
VVPTY S L
Sbjct: 2285 VVPTYSSML 2293


>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 1 VVPTYESCL 9
VVPTY S L
Sbjct: 2287 VVPTYSSML 2295


>sp|NCAP_IBVV1|NUCLEOPROTEIN infectious bronchitis virus (strain

Query: 1 VVPTYESCLL 10
+VPT +CLL
Sbjct: 276 LVPTPHACLL 285


>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42

Query: 1 VVPTYESC 8
+VPT E+C
Sbjct: 58 IVPTLETC 65


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 VPTYESCL 9
+P Y+ CL
Sbjct: 1982 IPLYQQCL 1989


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 VPTYESCL 9
+P Y+ CL
Sbjct: 1982 IPLYQQCL 1989


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 VPTYESCL 9
+P Y+ CL
Sbjct: 1982 IPLYQQCL 1989


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 VPTYESCL 9
+P Y+ CL
Sbjct: 1982 IPLYQQCL 1989


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 VPTYESCL 9
+P Y+ CL
Sbjct: 1982 IPLYQQCL 1989


>sp|CAPSD_AQRVC|INNER capsid protein VP3|Aquareovirus C (isolate Golden

Query: 1 VVPTYESCLLN 11
V PTY+S + N
Sbjct: 689 VAPTYDSAMSN 699


>sp|V033_FOWPN|SOLUBLE NSF attachment protein homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 VVPTYESCLLN 11
V YESC+++
Sbjct: 124 VAEIYESCIMD 134


>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate

Query: 5 YESCLLN 11
Y+SCLL+
Sbjct: 1274 YQSCLLH 1280


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 1 VVPTYES 7
+VPT+ES
Sbjct: 2277 IVPTFES 2283


>sp|TEG7_HHV2H|TEGUMENT protein UL51|Human herpesvirus 2 (strain HG52)

Query: 4 TYESCLLN 11
TY +C++N
Sbjct: 75 TYHACMVN 82


>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1 VVPTYESCL 9
V+PTY C+
Sbjct: 16 VIPTYTLCI 24


>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 VVPTYESCL 9
V+PTY C+
Sbjct: 16 VIPTYTLCI 24


>sp|172L_IIV6|PUTATIVE helicase 172L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 VVPTYESCLL 10
V+ TY+ CL
Sbjct: 148 VITTYDVCLF 157


>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)

Query: 4 TYESCLLN 11
TY +C++N
Sbjct: 74 TYHACMVN 81


>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United

Query: 1 VVPTYESCLLN 11
+ ++ESC LN
Sbjct: 310 IFSSHESCALN 320






THE END