1|SequenceR|10|1|LSLTEKEAVM
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 LTEKEAV 9
LTEKEA+
Sbjct: 700 LTEKEAM 706
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 LTEKEAV 9
LTEKEA+
Sbjct: 700 LTEKEAM 706
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 3 LTEKEAV 9
LTEKEA+
Sbjct: 700 LTEKEAM 706
2|SequenceR|15|6|DPCKNLSLTE
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PCKN+S +
Sbjct: 245 PCKNVSTVQ 253
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PCKN+S +
Sbjct: 236 PCKNVSTVQ 244
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PCKN+S +
Sbjct: 229 PCKNVSTVQ 237
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PCKN+S +
Sbjct: 251 PCKNVSTVQ 259
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PCKN+S +
Sbjct: 234 PCKNVSTVQ 242
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PCKN+S +
Sbjct: 240 PCKNVSTVQ 248
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 1 DPCKNLSLTE 10
DP KNLS E
Sbjct: 434 DPYKNLSFWE 443
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 1 DPCKNLSLTE 10
DP KNLS E
Sbjct: 434 DPYKNLSFWE 443
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PCKN+S +
Sbjct: 235 PCKNVSTVQ 243
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC+N+S +
Sbjct: 239 PCRNVSTVQ 247
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DPCKNLSLTE 10
D C NL++ E
Sbjct: 132 DTCYNLTVNE 141
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 235 PCTNVSTVQ 243
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 238 PCTNVSTVQ 246
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 249 PCTNVSTVQ 257
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLS 7
PC N+S
Sbjct: 236 PCNNVS 241
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 238 PCTNVSTVQ 246
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 238 PCTNVSTVQ 246
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 243 PCTNVSTVQ 251
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 238 PCTNVSTVQ 246
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 236 PCTNVSTVQ 244
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 250 PCTNVSTVQ 258
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 241 PCTNVSTVQ 249
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 236 PCTNVSTVQ 244
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 233 PCSNVSTVQ 241
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 238 PCTNVSTVQ 246
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 234 PCTNVSTVQ 242
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 243 PCTNVSTVQ 251
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 238 PCTNVSTVQ 246
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 238 PCTNVSTVQ 246
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 240 PCTNVSTVQ 248
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 241 PCTNVSTVQ 249
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 238 PCTNVSTVQ 246
>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56
Query: 1 DPCKNLSLTE 10
D C+ L LTE
Sbjct: 39 DTCEELWLTE 48
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 246 PCTNVSTVQ 254
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 235 PCHNVSTVQ 243
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 239 PCTNVSTVQ 247
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 240 PCTNVSTVQ 248
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCKNLSLTE 10
PC N+S +
Sbjct: 239 PCTNVSTVQ 247
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 DPCKNLSLTE 10
+P NL+LT+
Sbjct: 194 NPVPNLALTQ 203
3|SequenceR|20|11|RKPMKDPCKN
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RKPMKDPC 8
++P K+PC
Sbjct: 500 KQPKKEPC 507
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RKPMKDPC 8
++P K+PC
Sbjct: 500 KQPKKEPC 507
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 PMKDPCKN 10
P+ DPC N
Sbjct: 2089 PLGDPCAN 2096
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 2 KPMKDPCKN 10
K MKD C N
Sbjct: 562 KSMKDSCCN 570
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 1 RKPMKDPC 8
R P DPC
Sbjct: 97 RNPPPDPC 104
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 KPMKDPCKN 10
K MKD C N
Sbjct: 562 KSMKDSCCN 570
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 RKPMKDPCK 9
++ +KDPCK
Sbjct: 564 QQTVKDPCK 572
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 2 KPMKDPCKN 10
KP DP KN
Sbjct: 433 KPKDDPLKN 441
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 KPMKDPCKN 10
+PMK P K+
Sbjct: 1099 RPMKTPEKH 1107
>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P
Query: 1 RKPMKD 6
R+P+KD
Sbjct: 4 RRPLKD 9
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 KPMKDPCK 9
+PM D C+
Sbjct: 107 RPMPDACR 114
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 1 RKPMKDPCKN 10
R P + PC N
Sbjct: 387 RDPERRPCDN 396
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 KDPCKN 10
K PC+N
Sbjct: 237 KGPCRN 242
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 1 RKPMKDP 7
R+P+ DP
Sbjct: 409 RQPISDP 415
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 KPMKDP 7
KP+ DP
Sbjct: 1984 KPLSDP 1989
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 KPMKDP 7
KP+ DP
Sbjct: 1985 KPLNDP 1990
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 RKPMKDPCK 9
++ +K+PCK
Sbjct: 592 QQTIKNPCK 600
4|SequenceR|25|16|ALLKTRKPMK
>sp|NP03_HHV2H|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain HG52)
Query: 1 ALLKTRKPMK 10
A++++RKP K
Sbjct: 183 AVIRSRKPRK 192
>sp|NP03_HHV23|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain 333)
Query: 1 ALLKTRKPMK 10
A++++RKP K
Sbjct: 183 AVIRSRKPRK 192
>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ALLKTRKPMK 10
A+ T+KP+K
Sbjct: 28 AVEPTKKPLK 37
>sp|NSS_CCHFI|NON-STRUCTURAL protein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 TRKPMK 10
TRKPM
Sbjct: 136 TRKPMS 141
5|SequenceR|30|21|PLPQQALLKT
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 QQALLKT 10
+QALLKT
Sbjct: 4575 RQALLKT 4581
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 PLPQQALLKT 10
P P QALL T
Sbjct: 470 PQPTQALLDT 479
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 1 PLPQQALLKT 10
P P QALL T
Sbjct: 470 PQPTQALLDT 479
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 1 PLPQQAL 7
PLP QA+
Sbjct: 577 PLPSQAI 583
6|SequenceR|35|26|HPQHVPLPQQ
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 3 QHVPLPQQ 10
QH+PLP++
Sbjct: 572 QHLPLPER 579
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 PQHVPLPQ 9
P+H P+P+
Sbjct: 667 PRHAPIPR 674
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 PQHVPLPQ 9
P+H P+P+
Sbjct: 667 PRHAPIPR 674
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 QHVPLPQ 9
QH+ LPQ
Sbjct: 963 QHIKLPQ 969
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 QHVPLPQ 9
QH+ LPQ
Sbjct: 963 QHIKLPQ 969
Query: 2 PQHVPLPQ 9
PQ +P P+
Sbjct: 5373 PQQLPAPR 5380
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 HPQHVPLPQQ 10
HP P+P Q
Sbjct: 520 HPAFRPMPLQ 529
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HPQHVPLPQQ 10
HP P+P Q
Sbjct: 520 HPAFRPMPLQ 529
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HPQHVP 6
HP H P
Sbjct: 5917 HPAHAP 5922
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 HPQHVP 6
HP H P
Sbjct: 5955 HPAHAP 5960
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 HPQHVP 6
HP H P
Sbjct: 5975 HPAHAP 5980
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 HPQHVP 6
HP H P
Sbjct: 6005 HPAHAP 6010
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 PQHVPLP 8
PQ +P+P
Sbjct: 895 PQRLPVP 901
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 PQHVPLP 8
PQ +P+P
Sbjct: 895 PQRLPVP 901
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 PQHVPLP 8
PQ +P+P
Sbjct: 891 PQRLPVP 897
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HPQHVPLPQQ 10
HP P+P Q
Sbjct: 520 HPAFRPMPLQ 529
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 PQHVPLPQ 9
PQ +P P+
Sbjct: 5398 PQQLPAPR 5405
>sp|PG144_MONPV|VIRION membrane protein OPG144 precursor|Monkeypox virus (MPXV)
Query: 4 HVPLPQQ 10
+VP+P+Q
Sbjct: 170 NVPIPEQ 176
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 1 HPQHVP 6
HP+H+P
Sbjct: 440 HPRHLP 445
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 4 HVPLP 8
HVP+P
Sbjct: 1261 HVPIP 1265
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 HPQHVPL 7
H QH+P
Sbjct: 29 HNQHLPF 35
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 2 PQHVPL 7
PQH+PL
Sbjct: 634 PQHIPL 639
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 HVPLP 8
HVP+P
Sbjct: 1261 HVPVP 1265
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HPQHVPLPQQ 10
+P HV +PQ+
Sbjct: 330 NPYHVEVPQE 339
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 2 PQHVPL 7
PQH+PL
Sbjct: 632 PQHIPL 637
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HPQHVPLPQQ 10
+P HV +PQ+
Sbjct: 330 NPYHVEVPQE 339
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 PQHVPLPQ 9
P VPLP+
Sbjct: 2118 PCQVPLPE 2125
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 2 PQHVPLPQ 9
P++VPL Q
Sbjct: 36 PEYVPLTQ 43
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 2 PQHVPLPQQ 10
P H+ +PQ+
Sbjct: 524 PFHIQVPQK 532
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 QHVPLP 8
QH PLP
Sbjct: 369 QHPPLP 374
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 QHVPLP 8
QH PLP
Sbjct: 369 QHPPLP 374
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 2 PQHVPLPQQ 10
P H+ +PQ+
Sbjct: 545 PFHIQVPQK 553
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 QHVPLP 8
H+P+P
Sbjct: 503 HHIPMP 508
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 2 PQHVPLPQQ 10
P H+ +PQ+
Sbjct: 426 PFHIQVPQK 434
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 HPQHVP 6
HP+++P
Sbjct: 1710 HPENIP 1715
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 HPQHVP 6
HP+++P
Sbjct: 1710 HPENIP 1715
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 2 PQHVPLPQQ 10
P H+ +PQ+
Sbjct: 542 PFHIQVPQK 550
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 2 PQHVPLPQQ 10
P H+ +PQ+
Sbjct: 448 PFHIQVPQK 456
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 2 PQHVPLPQQ 10
P H+ +PQ+
Sbjct: 549 PFHIQVPQK 557
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 HPQHVP 6
H QHVP
Sbjct: 687 HSQHVP 692
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 2 PQHVPLPQQ 10
P H+ +PQ+
Sbjct: 573 PFHIQVPQK 581
>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins
Query: 2 PQHVPLPQ 9
P++VPL +
Sbjct: 36 PEYVPLKE 43
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 2 PQHVPLPQQ 10
P H+ +PQ+
Sbjct: 557 PFHIQVPQK 565
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 2 PQHVPLPQQ 10
P H+ +PQ+
Sbjct: 548 PFHIQVPQK 556
7|SequenceR|40|31|ESVLSHPQHV
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 6 HPQHV 10
HPQH+
Sbjct: 72 HPQHI 76
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 SHPQHV 10
SHP+HV
Sbjct: 305 SHPEHV 310
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 SHPQHV 10
SHP+HV
Sbjct: 305 SHPEHV 310
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SVLSHP 7
S+LSHP
Sbjct: 617 SILSHP 622
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SVLSHP 7
S+LSHP
Sbjct: 617 SILSHP 622
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 SVLSHP 7
S+LSHP
Sbjct: 617 SILSHP 622
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 6 HPQHV 10
HPQH+
Sbjct: 72 HPQHI 76
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 SVLSHPQHV 10
SVL + QHV
Sbjct: 1501 SVLCYLQHV 1509
8|SequenceR|45|36|KVTFGESVLS
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 1 KVTFGES 7
++TFG+S
Sbjct: 785 QITFGQS 791
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 1 KVTFGES 7
++TFG+S
Sbjct: 785 QITFGQS 791
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KVTFGESVL 9
KVTFG+ +
Sbjct: 822 KVTFGDDTV 830
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 1 KVTFGES 7
++TFG+S
Sbjct: 785 QITFGQS 791
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 1 KVTFGES 7
++TFG+S
Sbjct: 785 QITFGQS 791
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 1 KVTFGES 7
++TFG+S
Sbjct: 785 QITFGQS 791
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 KVTFGES 7
++TFG+S
Sbjct: 785 QITFGQS 791
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 KVTFGESVL 9
KVTFG+ +
Sbjct: 822 KVTFGDDTV 830
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 1 KVTFGES 7
++TFG+S
Sbjct: 785 QITFGQS 791
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 2 VTFGES 7
VTFG+S
Sbjct: 786 VTFGQS 791
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 VTFGESVL 9
VTFGE +
Sbjct: 824 VTFGEDTV 831
9|SequenceR|50|41|NKMMAKVTFG
***** No hits found ******
10|SequenceR|55|46|GRVVSNKMMA
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GRVVSNKMM 9
G+VV+N M+
Sbjct: 4241 GKVVANAML 4249
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 VVSNKMMA 10
VVS+K+MA
Sbjct: 2299 VVSDKLMA 2306
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 VVSNKMMA 10
V+S+K+MA
Sbjct: 2291 VISDKLMA 2298
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 GRVVSNKM 8
GR +SN++
Sbjct: 714 GRTISNRV 721
11|SequenceR|60|51|GAAPPGRVVS
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 GAAPPGRVVS 10
GA PPG+ V+
Sbjct: 960 GAVPPGKFVT 969
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 GAAPPGRVVS 10
GA PPG+ V+
Sbjct: 960 GAVPPGKFVT 969
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 2 AAPPGRVVS 10
A PPGR V+
Sbjct: 8 ACPPGRTVT 16
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 AAPPGRV 8
A PPG V
Sbjct: 1791 ATPPGSV 1797
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 AAPPGRV 8
A PPG V
Sbjct: 1792 ATPPGSV 1798
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 AAPPGRV 8
A PPG V
Sbjct: 1792 ATPPGSV 1798
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 AAPPGR 7
A PPGR
Sbjct: 1813 ATPPGR 1818
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 AAPPGR 7
A PPGR
Sbjct: 1813 ATPPGR 1818
12|SequenceR|65|56|REKFAGAAPP
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 2 EKFAGAAPP 10
+ +AG++PP
Sbjct: 266 DDYAGSSPP 274
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 2 EKFAGAAPP 10
+ +AG++PP
Sbjct: 266 DDYAGSSPP 274
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 2 EKFAGAAPP 10
+ +AG++PP
Sbjct: 266 DDYAGSSPP 274
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 2 EKFAGAAPP 10
+ +AG++PP
Sbjct: 266 DDYAGSSPP 274
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 4 FAGAAPP 10
+AG++PP
Sbjct: 268 YAGSSPP 274
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 REKFAGAAPP 10
RE+ G PP
Sbjct: 409 RERHGGQWPP 418
>sp|ORF2P_POL1M|ORF2P protein|Poliovirus type 1 (strain Mahoney)
Query: 4 FAGAAP 9
FAG+AP
Sbjct: 27 FAGSAP 32
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 REKFAGAA 8
+ KFAG+A
Sbjct: 84 KRKFAGSA 91
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 REKFAGAAPP 10
R KF A PP
Sbjct: 2278 RRKFPPALPP 2287
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 REKFAGAAPP 10
R KF A PP
Sbjct: 2278 RRKFPPALPP 2287
>sp|TRM2_VZVD|TRIPARTITE terminase subunit 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 REKFAG 6
RE+FAG
Sbjct: 136 RERFAG 141
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 EKFAGAAPP 10
+ F GA PP
Sbjct: 274 DAFLGAVPP 282
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 REKFAGAAP 9
R+K AG AP
Sbjct: 292 RKKTAGVAP 300
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 4 FAGAAPP 10
F+G PP
Sbjct: 1637 FSGVVPP 1643
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 FAGAAPP 10
F+G PP
Sbjct: 1638 FSGVVPP 1644
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 FAGAAPP 10
F+G PP
Sbjct: 1638 FSGVVPP 1644
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 FAGAAPP 10
F+G PP
Sbjct: 1638 FSGTVPP 1644
13|SequenceR|70|61|TPKTPREKFA
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 PKTPREKF 9
PKTP+ KF
Sbjct: 3336 PKTPKYKF 3343
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 PKTPREKF 9
PKTP+ KF
Sbjct: 3336 PKTPKYKF 3343
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 PKTPREKF 9
PKTP+ KF
Sbjct: 3359 PKTPKYKF 3366
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 PKTPREKF 9
PKTP+ KF
Sbjct: 3359 PKTPKYKF 3366
>sp|CEP3_HCMVM|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TPKTPREK 8
TP+TPR+K
Sbjct: 163 TPRTPRQK 170
>sp|CEP3_HCMVA|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TPKTPREK 8
TP+TPR+K
Sbjct: 163 TPRTPRQK 170
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PKTPREKFA 10
P +PR +FA
Sbjct: 931 PTSPRARFA 939
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 TPKTPRE 7
TPKTPR+
Sbjct: 950 TPKTPRQ 956
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 TPKTPRE 7
TPKTPR+
Sbjct: 950 TPKTPRQ 956
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 TPKTPRE 7
TPKTPR+
Sbjct: 950 TPKTPRQ 956
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 3 KTPREKFA 10
KTP E FA
Sbjct: 334 KTPLESFA 341
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PKTPREKFA 10
P +PR +FA
Sbjct: 931 PTSPRVRFA 939
>sp|E320_ADE03|EARLY E3 20.1 kDa glycoprotein|Human adenovirus B serotype 3
Query: 1 TPKTPREK 8
+P TP EK
Sbjct: 126 SPTTPNEK 133
>sp|RNB_HHV11|ACCESSORY factor US11|Human herpesvirus 1 (strain 17)
Query: 1 TPKTPRE 7
TP+TPRE
Sbjct: 147 TPRTPRE 153
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 TPKTPR 6
TPK PR
Sbjct: 1165 TPKNPR 1170
>sp|V_PIV5|NON-STRUCTURAL protein V|Parainfluenza virus 5 (strain W3)
Query: 2 PKTPREKFA 10
PK PR K A
Sbjct: 76 PKKPRPKIA 84
14|SequenceR|75|66|FKRFATPKTP
>sp|PG068_VARV|PROTEIN OPG068|Variola virus
Query: 1 FKRFATPKTP 10
F RF+T K P
Sbjct: 498 FVRFSTDKNP 507
>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 FKRFATPKTP 10
F RF+T K P
Sbjct: 498 FVRFSTDKNP 507
>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FKRFATPKTP 10
F RF+T K P
Sbjct: 498 FVRFSTDKNP 507
>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)
Query: 1 FKRFATPKTP 10
F RF+T K P
Sbjct: 498 FVRFSTDKNP 507
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 FKRFATPKTP 10
F+R A KTP
Sbjct: 2896 FERLAGKKTP 2905
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 2 KRFATPKTP 10
KRF T K P
Sbjct: 171 KRFITTKEP 179
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KRFATPKTP 10
KRF T K P
Sbjct: 171 KRFITTKEP 179
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 2 KRFATPKTP 10
KRF T K P
Sbjct: 171 KRFITTKEP 179
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 ATPKTP 10
A PKTP
Sbjct: 3357 ANPKTP 3362
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 ATPKTP 10
A PKTP
Sbjct: 3357 ANPKTP 3362
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 1 FKRFATPKTP 10
+K A P+TP
Sbjct: 100 YKCNAAPRTP 109
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 RFATPKTP 10
R TP+TP
Sbjct: 359 RIRTPRTP 366
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 RFATPKTP 10
R TP+TP
Sbjct: 359 RIRTPRTP 366
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 3 RFATPKTP 10
R TP+TP
Sbjct: 359 RIRTPRTP 366
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 RFATPKT 9
RF TP T
Sbjct: 512 RFTTPDT 518
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 RFATPKT 9
RF TP T
Sbjct: 506 RFTTPDT 512
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 RFATPKTP 10
R TP+TP
Sbjct: 359 RIRTPRTP 366
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FKRFATPK 8
F +FA PK
Sbjct: 336 FLQFAAPK 343
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FKRFATPK 8
F +FA PK
Sbjct: 336 FLQFAAPK 343
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FKRFATPK 8
F +FA PK
Sbjct: 336 FLQFAAPK 343
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 RFATPKTP 10
R TP+TP
Sbjct: 359 RIRTPRTP 366
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 RFATPKTP 10
R TP+TP
Sbjct: 359 RIRTPRTP 366
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 RFATPKTP 10
R TP+TP
Sbjct: 359 RIRTPRTP 366
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 2 KRFATP 7
+RFATP
Sbjct: 333 QRFATP 338
15|SequenceR|80|71|DGREYFKRFA
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 4 EYFKRF 9
+YFKRF
Sbjct: 342 KYFKRF 347
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 DGREYFKRF 9
DG+ +++RF
Sbjct: 2477 DGQPFYERF 2485
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 DGREYFKRF 9
DG+ +++RF
Sbjct: 2477 DGQPFYERF 2485
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 REYFKRFA 10
+EY+K FA
Sbjct: 2098 QEYWKEFA 2105
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 1 DGREY 5
DGREY
Sbjct: 156 DGREY 160
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 DGREYFKRF 9
+GR+ +K+F
Sbjct: 2113 NGRDAYKKF 2121
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 DGREYFK 7
+GREY++
Sbjct: 457 NGREYYE 463
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 DGREYFKR 8
DG + FKR
Sbjct: 1600 DGTQNFKR 1607
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 DGREYFKR 8
DG + FKR
Sbjct: 1600 DGTQNFKR 1607
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 DGREYFKR 8
DG + FKR
Sbjct: 1600 DGTQNFKR 1607
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 3 REYFKR 8
++YFKR
Sbjct: 78 KDYFKR 83
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 DGREYFK 7
+GR YF+
Sbjct: 871 NGRRYFR 877
16|SequenceR|85|76|LAIPFDGREY
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 LAIPFDGREY 10
+ +P DG EY
Sbjct: 651 IPVPVDGMEY 660
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 LAIPFDGREY 10
+ +P DG EY
Sbjct: 651 IPVPVDGMEY 660
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 2 AIPFDGREY 10
+ FDGRE+
Sbjct: 80 SFAFDGREW 88
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 5 FDGREY 10
FDGRE+
Sbjct: 83 FDGREW 88
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 4 PFDGRE 9
PF GRE
Sbjct: 16 PFSGRE 21
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 AIPFDGREY 10
+ FDGRE+
Sbjct: 80 SFAFDGREW 88
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 5 FDGREY 10
FDGRE+
Sbjct: 83 FDGREW 88
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 2 AIPFDGREY 10
+ FDG+E+
Sbjct: 80 SFAFDGKEW 88
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 AIPFDGREY 10
+ FDG+E+
Sbjct: 80 SFAFDGKEW 88
17|SequenceR|90|81|KSDHELAIPF
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HELAIPF 10
HE IP+
Sbjct: 1283 HEFGIPY 1289
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HELAIPF 10
HE IP+
Sbjct: 1285 HEFGIPY 1291
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 2 SDHELAIP 9
+DH AIP
Sbjct: 110 ADHARAIP 117
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 HELAIPF 10
H+LA+P+
Sbjct: 513 HDLALPW 519
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 HELAIPF 10
H+LA+P+
Sbjct: 513 HDLALPW 519
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 HELAIPF 10
H+LA+P+
Sbjct: 513 HDLALPW 519
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 4 HELAIPF 10
H+LA+P+
Sbjct: 441 HDLALPW 447
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 HELAIPF 10
H+LA+P+
Sbjct: 513 HDLALPW 519
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 HELAIPF 10
H+LA+P+
Sbjct: 513 HDLALPW 519
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 HELAIPF 10
H+LA+P+
Sbjct: 513 HDLALPW 519
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 SDHELAIPF 10
S H L +PF
Sbjct: 1755 SPHRLILPF 1763
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 SDHELAIPF 10
S H L +PF
Sbjct: 1755 SPHRLILPF 1763
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 HELAIPF 10
H L +PF
Sbjct: 1756 HRLVVPF 1762
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 HELAIPF 10
H L +PF
Sbjct: 1756 HRLVVPF 1762
>sp|PG069_MONPV|PROTEIN OPG069|Monkeypox virus (MPXV)
Query: 1 KSDHEL 6
KSDHE
Sbjct: 63 KSDHEF 68
>sp|PG069_VACCC|PROTEIN OPG069|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KSDHEL 6
KSDHE
Sbjct: 63 KSDHEF 68
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 HELAIPF 10
H L +PF
Sbjct: 1759 HRLVLPF 1765
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 HELAIPF 10
H L +PF
Sbjct: 1759 HRLVLPF 1765
18|SequenceR|95|86|AIKNGKSDHE
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 AIKNGKSDH 9
A+KNGK+ H
Sbjct: 963 AVKNGKAIH 971
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 AIKNGKSDH 9
IK G++DH
Sbjct: 2535 GIKRGETDH 2543
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 AIKNGKSDH 9
IK G++DH
Sbjct: 2532 GIKRGETDH 2540
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 AIKNGKSDH 9
IK G++DH
Sbjct: 2535 GIKRGETDH 2543
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 AIKNGKSDH 9
IK G++DH
Sbjct: 2535 GIKRGETDH 2543
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 495 SIRNGTYDHD 504
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 AIKNGKSDH 9
IK G++DH
Sbjct: 2535 GIKRGETDH 2543
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 AIKNGKSDH 9
IK G++DH
Sbjct: 2535 GIKRGETDH 2543
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 AIKNGKSDH 9
IK G++DH
Sbjct: 2535 GIKRGETDH 2543
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 497 SIRNGTYDHD 506
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 496 SIRNGTYDHD 505
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 AIKNGKSDHE 10
+I+NG DH+
Sbjct: 480 SIRNGTYDHD 489
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 1 AIKNGKSDH 9
+I+NG DH
Sbjct: 496 SIRNGTYDH 504
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 AIKNGKSDH 9
A+KNG + H
Sbjct: 963 AVKNGMAIH 971
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 AIKNGKSDH 9
A+KNG + H
Sbjct: 963 AVKNGMAIH 971
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 AIKNGKSDH 9
A+KNG + H
Sbjct: 963 AVKNGMAVH 971
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 AIKNGKSDH 9
A+KNG + H
Sbjct: 963 AVKNGMAVH 971
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 AIKNGKSDH 9
A+KNG + H
Sbjct: 963 AVKNGMAVH 971
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 AIKNGK 6
A+KNGK
Sbjct: 2003 ALKNGK 2008
19|SequenceR|100|91|IEVKWAIKNG
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 EVKWAIKNG 10
+VKW+ ++G
Sbjct: 149 QVKWSARDG 157
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 3 VKWAIKNG 10
V+WA NG
Sbjct: 362 VQWAYDNG 369
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 3 VKWAIKNG 10
V+WA NG
Sbjct: 361 VQWAYDNG 368
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 VKWAIKNG 10
V+W I NG
Sbjct: 429 VEWLIDNG 436
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EVKWAIKN 9
E WA+KN
Sbjct: 645 ERAWALKN 652
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 EVKWAIKN 9
E WA+KN
Sbjct: 644 ERAWALKN 651
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 3 VKWAIKNG 10
V+WA NG
Sbjct: 324 VQWAYDNG 331
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 3 VKWAIKNG 10
V+WA NG
Sbjct: 330 VQWAYDNG 337
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 EVKWAIKNG 10
+VKW+ + G
Sbjct: 148 QVKWSAREG 156
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 5 WAIKNG 10
W +KNG
Sbjct: 171 WCLKNG 176
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 WAIKNG 10
W +KNG
Sbjct: 171 WCLKNG 176
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 KWAIKNG 10
KW I NG
Sbjct: 392 KWPIMNG 398
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 WAIKNG 10
WA+ NG
Sbjct: 3479 WALSNG 3484
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 WAIKNG 10
WA+ NG
Sbjct: 3479 WALSNG 3484
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 3 VKWAIKNG 10
++W I NG
Sbjct: 425 IEWLIDNG 432
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 KWAIKNG 10
+WA+ NG
Sbjct: 3171 EWAMANG 3177
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 KWAIKNG 10
+WA+ NG
Sbjct: 3171 EWAMANG 3177
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 VKWAIK 8
V WAIK
Sbjct: 714 VNWAIK 719
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VKWAIKN 9
++W+I+N
Sbjct: 221 IQWSIQN 227
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 VKWAIK 8
++WAIK
Sbjct: 1202 IEWAIK 1207
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 5 WAIKNG 10
W I+NG
Sbjct: 389 WLIRNG 394
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 3 VKWAIKNG 10
V W ++NG
Sbjct: 237 VSWLLENG 244
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 5 WAIKNG 10
WA+ NG
Sbjct: 3517 WAMTNG 3522
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 5 WAIKNG 10
WA+ NG
Sbjct: 3537 WAMTNG 3542
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 WAIKNG 10
WA+ NG
Sbjct: 3517 WAMTNG 3522
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 WAIKNG 10
WA+ NG
Sbjct: 3537 WAMTNG 3542
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 5 WAIKNG 10
WA+ NG
Sbjct: 3567 WAMANG 3572
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 WAIKNG 10
WA+ NG
Sbjct: 3567 WAMANG 3572
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 EVKWAIKN 9
E+KW + N
Sbjct: 157 EMKWLLSN 164
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 2 EVKWAIKN 9
E+KW + N
Sbjct: 157 EMKWLLSN 164
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 VKWAIK 8
V WA+K
Sbjct: 712 VSWAVK 717
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 VKWAIK 8
V WA+K
Sbjct: 715 VSWAVK 720
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 VKWAIK 8
V WA+K
Sbjct: 711 VSWAVK 716
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 VKWAIK 8
V WA+K
Sbjct: 711 VSWAVK 716
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 2 EVKWAIKN 9
E+KW + N
Sbjct: 157 EMKWLLSN 164
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 VKWAIK 8
V+WA+K
Sbjct: 746 VEWALK 751
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 VKWAIK 8
V+WA+K
Sbjct: 746 VEWALK 751
20|SequenceR|105|96|YDLKEIEVKW
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 YDLKEIEVKW 10
YD+ E+ V W
Sbjct: 888 YDVPEVSVDW 897
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 532 YSLKEKEIK 540
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 532 YSLKEKEIK 540
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 548 YSLKEKEIK 556
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 548 YSLKEKEIK 556
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 549 YSLKEKEIK 557
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 550 YSLKEKEIK 558
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 550 YSLKEKEIK 558
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 550 YSLKEKEIK 558
>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 EIEVKW 10
EIEV W
Sbjct: 43 EIEVSW 48
>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 EIEVKW 10
EIEV W
Sbjct: 43 EIEVSW 48
>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 EIEVKW 10
EIEV W
Sbjct: 43 EIEVSW 48
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 KEIEVKW 10
+E+E+ W
Sbjct: 275 REVEIAW 281
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 YDLKEI 6
YDLK+I
Sbjct: 177 YDLKQI 182
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 KEIEVKW 10
+E+E+ W
Sbjct: 307 REVEIAW 313
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 YDLKEIEVK 9
Y LKE E+K
Sbjct: 540 YSLKEKEIK 548
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 YDLKEIEVK 9
Y L+E E+K
Sbjct: 532 YSLQEKEIK 540
>sp|VE6_HPV27|PROTEIN E6|Human papillomavirus 27
Query: 1 YDLKEIEVKW 10
+ +KE+ V W
Sbjct: 50 FAIKELSVVW 59
>sp|VE6_HPV61|PROTEIN E6|Human papillomavirus type 61
Query: 1 YDLKEIEVKW 10
+ LKE+ + W
Sbjct: 42 FALKELSIVW 51
21|SequenceR|110|101|PLYHHYDLKE
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PLYHHYD 7
P+YHH D
Sbjct: 1762 PIYHHID 1768
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 YHHYDL 8
YHH DL
Sbjct: 769 YHHRDL 774
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1762 PIHHHID 1768
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1596 PIHHHID 1602
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1762 PIHHHID 1768
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1762 PIHHHID 1768
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1760 PIHHHID 1766
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1762 PIHHHID 1768
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1762 PIHHHID 1768
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1763 PIHHHID 1769
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PLYHHYD 7
P++HH D
Sbjct: 1763 PIHHHID 1769
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YHHY 6
YHHY
Sbjct: 284 YHHY 287
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YHHY 6
YHHY
Sbjct: 284 YHHY 287
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 3 YHHYDL 8
YHH DL
Sbjct: 652 YHHKDL 657
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 YHHY 6
YHHY
Sbjct: 1222 YHHY 1225
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 LYHHYDL 8
LYH Y+L
Sbjct: 2065 LYHRYNL 2071
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 YHHY 6
YHHY
Sbjct: 1222 YHHY 1225
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 LYHHYDL 8
LYH Y+L
Sbjct: 2065 LYHRYNL 2071
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 YHHY 6
YHHY
Sbjct: 1222 YHHY 1225
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 YHHY 6
YHHY
Sbjct: 1222 YHHY 1225
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 YHHYD 7
Y HYD
Sbjct: 1874 YQHYD 1878
Query: 3 YHHYDLKE 10
Y HY L++
Sbjct: 247 YGHYSLQD 254
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 YHHYD 7
Y HYD
Sbjct: 1894 YQHYD 1898
Query: 3 YHHYDLKE 10
Y HY L++
Sbjct: 247 YGHYSLQD 254
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 YHHYD 7
Y HYD
Sbjct: 1924 YQHYD 1928
Query: 3 YHHYDLKE 10
Y HY L++
Sbjct: 247 YGHYSLQD 254
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 PLYHHY 6
P+Y HY
Sbjct: 199 PMYVHY 204
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 LYHHYDL 8
LYH Y+L
Sbjct: 2068 LYHRYNL 2074
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 LYHHYDL 8
LYH Y+L
Sbjct: 2068 LYHRYNL 2074
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 LYHHYDL 8
LYH Y+L
Sbjct: 2066 LYHRYNL 2072
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 YHHYD 7
Y HYD
Sbjct: 1894 YQHYD 1898
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 YHHYD 7
Y HYD
Sbjct: 1874 YQHYD 1878
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 YHHYD 7
Y HYD
Sbjct: 1924 YQHYD 1928
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 LYHHYDL 8
LYH Y+L
Sbjct: 2066 LYHRYNL 2072
>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)
Query: 2 LYHHYDL 8
LY HY+L
Sbjct: 101 LYIHYNL 107
>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)
Query: 2 LYHHYDL 8
LY HY+L
Sbjct: 101 LYIHYNL 107
>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /
Query: 2 LYHHYDL 8
LY HY+L
Sbjct: 101 LYIHYNL 107
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 LYHHYDLK 9
L HH DL+
Sbjct: 2634 LSHHSDLE 2641
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 3 YHHYDLKE 10
+H+Y+L E
Sbjct: 940 FHNYELAE 947
>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)
Query: 2 LYHHYDL 8
LY HY+L
Sbjct: 101 LYIHYNL 107
>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 LYHHYDL 8
LY HY+L
Sbjct: 101 LYIHYNL 107
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 2 LYHHYDL 8
LY HY+L
Sbjct: 101 LYIHYNL 107
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 YHHYDLK 9
+H YD K
Sbjct: 2497 FHGYDFK 2503
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 YHHYDLK 9
+H YD K
Sbjct: 2497 FHGYDFK 2503
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 2 LYHHYDL 8
LY HY+L
Sbjct: 101 LYIHYNL 107
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 1 PLYHHYDLKE 10
PL++ YD E
Sbjct: 120 PLFNKYDDTE 129
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LYHHYDLK 9
L HH DL+
Sbjct: 2634 LSHHSDLE 2641
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 2 LYHHYD 7
YHH D
Sbjct: 156 FYHHAD 161
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 1 PLYHHYDLKE 10
PL++ YD E
Sbjct: 120 PLFNKYDDTE 129
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 LYHHYDL 8
L HHY L
Sbjct: 1243 LVHHYML 1249
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LYHHYD 7
+ HHYD
Sbjct: 60 MSHHYD 65
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 3 YHHYDL 8
YHH D
Sbjct: 479 YHHRDF 484
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 2 LYHHYDLKE 10
+YH+Y+L +
Sbjct: 269 IYHYYNLYQ 277
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LYHHYD 7
+ HHYD
Sbjct: 60 MSHHYD 65
>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LYHHYDL 8
L HHY+L
Sbjct: 182 LGHHYEL 188
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 LYHHYDLKE 10
++H YD+ E
Sbjct: 97 IFHVYDIVE 105
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 3 YHHYD 7
YHH+D
Sbjct: 564 YHHWD 568
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 3 YHHYD 7
YHH+D
Sbjct: 564 YHHWD 568
22|SequenceR|115|106|GDFFLPLYHH
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 FLPLYHH 10
FLPLY H
Sbjct: 1181 FLPLYAH 1187
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 1 GDFFLPLYH 9
DFF PL H
Sbjct: 119 ADFFQPLSH 127
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 FLPLYHH 10
FLPLY H
Sbjct: 1181 FLPLYAH 1187
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 DFFLPLY 8
D FLP Y
Sbjct: 57 DLFLPFY 63
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 GDFFLPLYHH 10
GD+F PL H
Sbjct: 952 GDYFYPLPVH 961
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 1 GDFFLPLY 8
G F LP+Y
Sbjct: 530 GGFMLPIY 537
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 1 GDFFLPLY 8
G F LP+Y
Sbjct: 531 GGFMLPIY 538
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 1 GDFFLPLY 8
G F LP+Y
Sbjct: 531 GGFMLPIY 538
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 1 GDFFLPLY 8
G F LP+Y
Sbjct: 361 GGFMLPIY 368
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484
>sp|PAP1_YLDV|POLY(A) polymerase catalytic subunit|Yaba-like disease virus (YLDV)
Query: 1 GDFFLPL 7
GDF +PL
Sbjct: 424 GDFLIPL 430
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FLPLYH 9
F PLYH
Sbjct: 479 FAPLYH 484
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FLPLYH 9
F PLYH
Sbjct: 458 FAPLYH 463
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 4 FLPLYH 9
F+PL+H
Sbjct: 552 FVPLFH 557
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 FLPLYH 9
F+PL+H
Sbjct: 553 FVPLFH 558
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 3 FFLPLY 8
FFLP++
Sbjct: 572 FFLPIF 577
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 FFLPLY 8
FFLP++
Sbjct: 577 FFLPIF 582
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 FFLPLY 8
FFLP++
Sbjct: 577 FFLPIF 582
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 GDFFLP 6
GD FLP
Sbjct: 2754 GDVFLP 2759
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 FLPLYHH 10
++P+YH+
Sbjct: 2070 YIPVYHN 2076
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 4 FLPLYHH 10
++P+YH+
Sbjct: 2043 YIPVYHN 2049
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 FLPLYHH 10
++P+YH+
Sbjct: 2048 YIPVYHN 2054
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 DFFLPLY 8
DF LP+Y
Sbjct: 2784 DFQLPVY 2790
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 FFLPLY 8
FFLP++
Sbjct: 578 FFLPVF 583
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 3 FFLPLY 8
FFLP++
Sbjct: 577 FFLPVF 582
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 DFFLPLY 8
DF LP+Y
Sbjct: 2784 DFQLPVY 2790
>sp|DR5_HHV6U|UNCHARACTERIZED protein DR5|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 FFLPLY 8
FF+P Y
Sbjct: 23 FFMPAY 28
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 LPLYHH 10
+PL HH
Sbjct: 524 MPLSHH 529
>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain
Query: 1 GDFFLPL 7
GD+ +PL
Sbjct: 424 GDYLIPL 430
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 DFFLPL 7
+FF+PL
Sbjct: 200 EFFIPL 205
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 5 LPLYH 9
LP+YH
Sbjct: 293 LPVYH 297
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 LPLYHH 10
LP YH+
Sbjct: 113 LPFYHN 118
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 LPLYHH 10
LP YH+
Sbjct: 113 LPFYHN 118
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 GDFFLPLYH 9
GD P YH
Sbjct: 689 GDLTSPPYH 697
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 GDFFLPLYH 9
GD P YH
Sbjct: 689 GDLTSPPYH 697
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 GDFFLPLYH 9
GD P YH
Sbjct: 689 GDLTSPPYH 697
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 GDFFLPLY 8
G F PLY
Sbjct: 1972 GGFVAPLY 1979
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 DFFLPL 7
D FLPL
Sbjct: 947 DLFLPL 952
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 DFFLPL 7
D FLPL
Sbjct: 947 DLFLPL 952
>sp|REX_HTL1F|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 1 GDFFLPLY 8
GD+ P+Y
Sbjct: 52 GDYVRPVY 59
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 GDFFLPLYHH 10
GD++L Y H
Sbjct: 439 GDYYLWPYTH 448
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 5 LPLYHH 10
+PLY H
Sbjct: 567 IPLYFH 572
23|SequenceR|120|111|TMECLGDFFL
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 MECLGDFF 9
+ C GDFF
Sbjct: 372 LNCGGDFF 379
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 CLGDFF 9
C+G+FF
Sbjct: 378 CMGEFF 383
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 TMECLGDFF 9
T C G+FF
Sbjct: 369 TFNCGGEFF 377
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 2 MECLGDFF 9
+ECL FF
Sbjct: 312 LECLQRFF 319
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 2 MECLGDFF 9
+ECL FF
Sbjct: 310 LECLQRFF 317
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 ECLGD 7
ECLGD
Sbjct: 821 ECLGD 825
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TMECLGDFF 9
+ C G+FF
Sbjct: 365 SFNCRGEFF 373
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TMECLGDFF 9
+ C G+FF
Sbjct: 374 SFNCRGEFF 382
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TMECLGDFF 9
+ C G+FF
Sbjct: 372 SFNCRGEFF 380
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TMECLGDFF 9
+ C G+FF
Sbjct: 377 SFNCRGEFF 385
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TMECLGDFF 9
+ C G+FF
Sbjct: 373 SFNCRGEFF 381
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TMECLGDFF 9
+ C G+FF
Sbjct: 377 SFNCRGEFF 385
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TMECLGDFF 9
+ C G+FF
Sbjct: 371 SFNCRGEFF 379
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TMECLGDFF 9
+ C G+FF
Sbjct: 371 SFNCRGEFF 379
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TMECLGDFF 9
+ C G+FF
Sbjct: 366 SFNCRGEFF 374
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 CLGDFF 9
C G+FF
Sbjct: 363 CXGEFF 368
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 2 MECLGDFFL 10
+EC D FL
Sbjct: 351 LECTFDIFL 359
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 CLGDFF 9
C G+FF
Sbjct: 379 CAGEFF 384
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 CLGDFF 9
C G+FF
Sbjct: 389 CRGEFF 394
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 CLGDFF 9
C G+FF
Sbjct: 390 CRGEFF 395
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 CLGDFF 9
C G+FF
Sbjct: 367 CRGEFF 372
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 MECLGD 7
+ECLG+
Sbjct: 297 IECLGE 302
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 MECLGD 7
+ECLG+
Sbjct: 297 IECLGE 302
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 MECLGD 7
+ECLG+
Sbjct: 297 IECLGE 302
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 ECLGD 7
+CLGD
Sbjct: 839 DCLGD 843
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain AD169)
Query: 3 ECLGDF 8
EC+G+F
Sbjct: 175 ECVGEF 180
24|SequenceR|125|116|FEYPFTMECL
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 YPFTMECL 10
YPF ++CL
Sbjct: 2066 YPFPIDCL 2073
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 YPFTMECL 10
YPF ++CL
Sbjct: 2066 YPFPIDCL 2073
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 YPFTMECL 10
YPF ++CL
Sbjct: 2066 YPFPIDCL 2073
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 YPFTMECL 10
YPF ++CL
Sbjct: 2066 YPFPIDCL 2073
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 1 FEYPFTME 8
FEYP T E
Sbjct: 429 FEYPLTKE 436
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FEYPFTME 8
FEYP T E
Sbjct: 429 FEYPLTKE 436
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 FEYPFTME 8
FEYP T E
Sbjct: 429 FEYPLTKE 436
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 YPFTMEC 9
YPF ++C
Sbjct: 2066 YPFPIDC 2072
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EYPFTMECL 10
EY +ECL
Sbjct: 18 EYAMELECL 26
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EYPFTMECL 10
EY +ECL
Sbjct: 18 EYAMELECL 26
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 YPFTMEC 9
Y F++EC
Sbjct: 1969 YSFSLEC 1975
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 4 PFTMEC 9
PF+ EC
Sbjct: 1127 PFSAEC 1132
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 4 PFTMEC 9
PF+ EC
Sbjct: 1127 PFSAEC 1132
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 4 PFTMECL 10
P+T+ CL
Sbjct: 376 PYTINCL 382
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PFTMECL 10
P+T+ CL
Sbjct: 376 PYTINCL 382
>sp|VE4_HPV42|PROTEIN E4|Human papillomavirus 42
Query: 3 YPFTMECL 10
+P+T++C+
Sbjct: 88 HPWTLDCV 95
>sp|TEG6_VZVO|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 PFTMEC 9
PF+ EC
Sbjct: 150 PFSAEC 155
>sp|TEG6_VZVD|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PFTMEC 9
PF+ EC
Sbjct: 150 PFSAEC 155
25|SequenceR|130|121|GQRAFFEYPF
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 1 GQRAFFEYP 9
G R+F+ YP
Sbjct: 363 GSRSFYVYP 371
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 3 RAFFEYPF 10
R FFE PF
Sbjct: 645 RKFFERPF 652
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 RAFFEYPF 10
R FFE PF
Sbjct: 645 RKFFERPF 652
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 1 GQRAFFEYP 9
G R+F+ YP
Sbjct: 364 GMRSFYVYP 372
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 GQRAFFEYP 9
G R+F+ YP
Sbjct: 362 GTRSFYVYP 370
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 1 GQRAFFEYP 9
G R+F+ YP
Sbjct: 365 GTRSFYVYP 373
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 QRAFFEYPF 10
+R FEYP
Sbjct: 425 KRLMFEYPL 433
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 QRAFFEYPF 10
+R FEYP
Sbjct: 425 KRLMFEYPL 433
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 2 QRAFFEYPF 10
+R FEYP
Sbjct: 425 KRLMFEYPL 433
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 5 FFEYPF 10
FFE PF
Sbjct: 648 FFERPF 653
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 5 FFEYPF 10
FFE PF
Sbjct: 648 FFERPF 653
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 FFEYPF 10
FFE PF
Sbjct: 647 FFERPF 652
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 5 FFEYPF 10
FFE PF
Sbjct: 648 FFERPF 653
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 1 GQRAFFEYP 9
GQRA E P
Sbjct: 253 GQRALKEQP 261
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 GQRAFFE 7
G+RAF++
Sbjct: 349 GERAFYD 355
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 GQRAFFE 7
G+RAF++
Sbjct: 343 GERAFYD 349
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 GQRAFFE 7
G+RAF++
Sbjct: 342 GERAFYD 348
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 GQRAFFEY 8
G+R FF Y
Sbjct: 929 GERYFFAY 936
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 GQRAFFE 7
G+RAF++
Sbjct: 306 GERAFYD 312
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 3 RAFFEYPF 10
R FF+ PF
Sbjct: 209 RIFFKAPF 216
>sp|SH_MUMPR|SMALL hydrophobic protein|Mumps virus (strain RW) (MuV)
Query: 2 QRAFFEYPF 10
QR+FF + F
Sbjct: 45 QRSFFRWSF 53
>sp|SH_MUMPT|SMALL hydrophobic protein|Mumps virus (strain Takahashi) (MuV)
Query: 2 QRAFFEYPF 10
QR+FF + F
Sbjct: 45 QRSFFRWSF 53
26|SequenceR|135|126|LMDHIGQRAF
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 3 DHIGQRAF 10
DH G+RA+
Sbjct: 162 DHTGERAY 169
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 3 DHIGQRAF 10
DH G+RA+
Sbjct: 162 DHTGERAY 169
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 IGQRAF 10
IGQRAF
Sbjct: 818 IGQRAF 823
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 DHIGQRAF 10
DH GQR +
Sbjct: 2800 DHTGQRYY 2807
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 DHIGQRAF 10
DH GQR +
Sbjct: 2806 DHTGQRYY 2813
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 LMDHIGQR 8
++DH+G R
Sbjct: 1104 ILDHLGNR 1111
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 LMDHIGQR 8
++DH+G R
Sbjct: 1104 ILDHLGNR 1111
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 LMDHIGQR 8
L +H+GQR
Sbjct: 2134 LPEHLGQR 2141
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 4 HIGQRA 9
HIG RA
Sbjct: 266 HIGHRA 271
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 HIGQRAF 10
H G RAF
Sbjct: 684 HAGMRAF 690
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 HIGQRAF 10
H G RAF
Sbjct: 684 HAGMRAF 690
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 HIGQRAF 10
H GQR++
Sbjct: 239 HAGQRSY 245
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 4 HIGQRAF 10
H GQR++
Sbjct: 239 HAGQRSY 245
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 4 HIGQRAF 10
H GQR++
Sbjct: 239 HAGQRSY 245
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 LMDHIGQ 7
LMD +GQ
Sbjct: 1177 LMDDLGQ 1183
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 36 DHANARAF 43
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 38 DHANARAF 45
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 38 DHANARAF 45
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 37 DHANARAF 44
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 35 DHANARAF 42
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 35 DHANARAF 42
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 36 DHANARAF 43
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 36 DHANARAF 43
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 36 DHANARAF 43
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 36 DHANARAF 43
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 35 DHANARAF 42
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 36 DHANARAF 43
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 36 DHANARAF 43
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 36 DHANARAF 43
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 36 DHANARAF 43
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 36 DHANARAF 43
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 36 DHANARAF 43
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 36 DHANARAF 43
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 36 DHANARAF 43
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 DHIGQRAF 10
DH RAF
Sbjct: 36 DHANARAF 43
>sp|V073_ORFSA|PROTEIN ORFV073|Orf virus (strain Goat/Texas/SA00/2000) (OV-SA00)
Query: 1 LMDHIGQRAF 10
++ H G RAF
Sbjct: 32 VLRHCGVRAF 41
27|SequenceR|140|131|NGGHELMDHI
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 NGGHELMD 8
NG H LMD
Sbjct: 288 NGPHSLMD 295
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 NGGHELMD 8
NG H LMD
Sbjct: 288 NGPHSLMD 295
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 GGHELMDH 9
HE++DH
Sbjct: 1059 AAHEILDH 1066
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 GGHELMDH 9
HE++DH
Sbjct: 1059 AAHEILDH 1066
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 GGHELMDH 9
HE++DH
Sbjct: 1059 AAHEILDH 1066
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 3 GHELMD 8
GHELM+
Sbjct: 946 GHELME 951
Query: 4 HELMDHI 10
HEL D++
Sbjct: 579 HELYDYV 585
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 3 GHELMD 8
GHELM+
Sbjct: 1017 GHELME 1022
Query: 4 HELMDHI 10
HEL D++
Sbjct: 649 HELYDYV 655
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GHELMD 8
GHELM+
Sbjct: 244 GHELMN 249
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 ELMDH 9
ELMDH
Sbjct: 707 ELMDH 711
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 ELMDH 9
ELMDH
Sbjct: 707 ELMDH 711
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 GGHELMDH 9
G H+L+D+
Sbjct: 2240 GTHQLLDY 2247
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GGHELMDHI 10
GG++ +DH+
Sbjct: 1152 GGNQEIDHL 1160
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GGHELMDHI 10
GG++ +DH+
Sbjct: 1153 GGNQEVDHL 1161
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GGHELMDHI 10
GG++ +DH+
Sbjct: 1153 GGNQEVDHL 1161
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GGHELMDHI 10
GG++ +DH+
Sbjct: 1154 GGNQEVDHL 1162
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GGHELMDHI 10
GG++ +DH+
Sbjct: 1151 GGNQEVDHL 1159
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GGHELMDHI 10
GG++ +DH+
Sbjct: 1153 GGNQEVDHL 1161
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GGHELMDHI 10
GG++ +DH+
Sbjct: 1154 GGNQEVDHL 1162
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GGHELMDHI 10
GG++ +DH+
Sbjct: 1151 GGNQEVDHL 1159
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GGHELMDHI 10
GG++ +DH+
Sbjct: 1152 GGNQEVDHL 1160
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GGHELMDHI 10
GG++ +DH+
Sbjct: 1152 GGNQEVDHL 1160
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GGHELMDHI 10
GG++ +DH+
Sbjct: 1152 GGNQEVDHL 1160
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GGHELMDHI 10
GG++ +DH+
Sbjct: 1153 GGNQEVDHL 1161
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 GHELMDH 9
G E++DH
Sbjct: 393 GREMVDH 399
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 1 NGGHELMDHI 10
N GH ++H+
Sbjct: 404 NNGHMAVNHV 413
>sp|Y145_ADE07|UNCHARACTERIZED 14.5 kDa early protein|Human adenovirus B serotype 7
Query: 3 GHELMD 8
GHEL+D
Sbjct: 59 GHELLD 64
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 4 HELMDHI 10
HEL D++
Sbjct: 518 HELYDYV 524
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 4 HELMDHI 10
HEL D++
Sbjct: 654 HELYDYV 660
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 4 HELMDHI 10
HEL D++
Sbjct: 654 HELYDYV 660
28|SequenceR|145|136|VPLIKNGGHE
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2738 VPLSRNSNHE 2747
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2738 VPLSRNSNHE 2747
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2725 VPLCRNSTHE 2734
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2729 VPLSRNSNHE 2738
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2727 VPLSRNSTHE 2736
>sp|NS1_HRSVB|NON-STRUCTURAL protein 1|Human respiratory syncytial virus B
Query: 1 VPLIKNGGH 9
+P+++NGG+
Sbjct: 80 MPILQNGGY 88
>sp|NS1_HRSV1|NON-STRUCTURAL protein 1|Human respiratory syncytial virus B
Query: 1 VPLIKNGGH 9
+P+++NGG+
Sbjct: 80 MPILQNGGY 88
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2729 VPLSRNSTHE 2738
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2729 VPLSRNSTHE 2738
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2729 VPLSRNSTHE 2738
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2733 VPLSRNSTHE 2742
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 VPLIKNGGHE 10
VPL +N HE
Sbjct: 2732 VPLSRNSTHE 2741
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 PLIKNGGH 9
P++ +GGH
Sbjct: 192 PIVTHGGH 199
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 VPLIKNGGHE 10
+PL +N HE
Sbjct: 2736 LPLSRNSNHE 2745
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 VPLIKNGGHE 10
+PL +N HE
Sbjct: 2736 LPLSRNSNHE 2745
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 VPLIKNGGHE 10
+PL +N HE
Sbjct: 2736 LPLSRNSNHE 2745
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 VPLIKNGGHE 10
+PL +N HE
Sbjct: 2736 LPLSRNSNHE 2745
>sp|PHOSP_CHAV|PHOSPHOPROTEIN virus (strain I653514) (CHPV)
Query: 2 PLIKNGGHE 10
P+I+ GG+E
Sbjct: 107 PVIETGGNE 115
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 VPLIKNGGHE 10
VP +N HE
Sbjct: 2708 VPFSRNSTHE 2717
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 VPLIKNGGHE 10
VP +N HE
Sbjct: 2723 VPFSRNSTHE 2732
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 VPLIKNGGHE 10
VP +N HE
Sbjct: 2722 VPFSRNSTHE 2731
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 VPLIKNGGHE 10
VP +N HE
Sbjct: 2723 VPFSRNSTHE 2732
>sp|GJ_HHV2H|ENVELOPE glycoprotein J|Human herpesvirus 2 (strain HG52)
Query: 2 PLIKNGG 8
PLI++GG
Sbjct: 43 PLIRSGG 49
>sp|SPIKE_ADE03|FIBER protein|Human adenovirus B serotype 3
Query: 3 LIKNGG 8
L+KNGG
Sbjct: 160 LVKNGG 165
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 2 PLIKNGG 8
P ++NGG
Sbjct: 343 PPVRNGG 349
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 1 VPLIKNGGH 9
VP ++ GG
Sbjct: 457 VPAVRQGGQ 465
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 1 VPLIKNGGH 9
VP ++ GG
Sbjct: 457 VPAVRQGGQ 465
>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus
Query: 4 IKNGGH 9
+K GGH
Sbjct: 63 VKKGGH 68
>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 IKNGGH 9
+K GGH
Sbjct: 63 VKKGGH 68
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 IKNGGH 9
+K GGH
Sbjct: 63 VKKGGH 68
>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)
Query: 4 IKNGGH 9
+K GGH
Sbjct: 63 VKKGGH 68
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 VPLIKNGG 8
VPL + GG
Sbjct: 1295 VPLSRGGG 1302
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 VPLIKNGG 8
VPL + GG
Sbjct: 1295 VPLSRGGG 1302
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 IKNGGHE 10
I NG HE
Sbjct: 5170 INNGPHE 5176
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 VPLIKNGG 8
VPL + GG
Sbjct: 1295 VPLSRGGG 1302
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 VPLIKNGG 8
VPL + GG
Sbjct: 1295 VPLSRGGG 1302
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 VPLIKNGG 8
VPL + GG
Sbjct: 1295 VPLSRGGG 1302
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 VPLIKNGG 8
VPL + GG
Sbjct: 1295 VPLSRGGG 1302
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 VPLIKNGG 8
VPL + GG
Sbjct: 1295 VPLSRGGG 1302
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 VPLIKNGG 8
VPL + GG
Sbjct: 1295 VPLSRGGG 1302
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 VPLIKNGG 8
VPL + GG
Sbjct: 1295 VPLSRGGG 1302
29|SequenceR|150|141|ILQPLVPLIK
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LQPLVPLI 9
LQP VPL+
Sbjct: 176 LQPNVPLV 183
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LQPLVPLI 9
LQP VPL+
Sbjct: 175 LQPNVPLV 182
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LQPLVPLI 9
LQP VPL+
Sbjct: 176 LQPNVPLV 183
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L+PLVP
Sbjct: 63 VLEPLVP 69
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L+PLVP
Sbjct: 63 VLEPLVP 69
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L+PLVP
Sbjct: 63 VLEPLVP 69
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L+PLVP
Sbjct: 63 VLEPLVP 69
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ILQPLVPL 8
+++PL PL
Sbjct: 372 LIKPLTPL 379
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L PLVP
Sbjct: 63 VLDPLVP 69
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L PLVP
Sbjct: 63 VLDPLVP 69
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L PLVP
Sbjct: 63 VLDPLVP 69
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L PLVP
Sbjct: 63 VLDPLVP 69
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L PLVP
Sbjct: 63 VLDPLVP 69
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 2 LQPLVPL 8
L PL+PL
Sbjct: 158 LSPLLPL 164
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L PLVP
Sbjct: 63 VLDPLVP 69
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L PLVP
Sbjct: 63 VLDPLVP 69
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L PLVP
Sbjct: 63 VLDPLVP 69
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 2 LQPLVPL 8
L PL+PL
Sbjct: 28 LSPLLPL 34
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L PLVP
Sbjct: 63 VLDPLVP 69
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 ILQPLVPLI 9
IL P +PL+
Sbjct: 381 ILSPFIPLL 389
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 ILQPLVPLI 9
IL P +PL+
Sbjct: 381 ILSPFIPLL 389
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 4 PLVPLIK 10
P+VPL++
Sbjct: 1178 PIVPLLQ 1184
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L PLVP
Sbjct: 63 VLDPLVP 69
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L PLVP
Sbjct: 63 VLDPLVP 69
>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 1 ILQPLVPLI 9
IL P +PL+
Sbjct: 382 ILSPFIPLL 390
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 ILQPLVPLI 9
IL P +PL+
Sbjct: 381 ILSPFIPLL 389
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ILQPLVP 7
+L PLVP
Sbjct: 63 VLDPLVP 69
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 2 LQPLVP 7
LQPLVP
Sbjct: 331 LQPLVP 336
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 ILQPLVPLI 9
IL P +PL+
Sbjct: 382 ILSPFIPLL 390
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 ILQPLVPLI 9
IL P +PL+
Sbjct: 382 ILSPFIPLL 390
>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 1 ILQPLVPLI 9
IL+P +PL+
Sbjct: 382 ILRPFMPLL 390
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 LQPLVPL 8
L PL+PL
Sbjct: 160 LNPLLPL 166
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 LQPLVPL 8
L PL+PL
Sbjct: 160 LNPLLPL 166
>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 ILQPLVPLI 9
IL P +PL+
Sbjct: 382 ILSPFIPLL 390
>sp|HBSAG_HBVF3|LARGE envelope protein|Hepatitis B virus genotype F1
Query: 1 ILQPLVPLI 9
IL P +PL+
Sbjct: 382 ILSPFIPLL 390
>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 ILQPLVPLI 9
IL P +PL+
Sbjct: 382 ILSPFLPLL 390
>sp|HBSAG_HBVA5|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 1 ILQPLVPLI 9
IL P +PL+
Sbjct: 382 ILSPFIPLL 390
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 LQPLVPL 8
L PL+PL
Sbjct: 160 LSPLLPL 166
>sp|HBSAG_HBVG3|LARGE envelope protein|Hepatitis B virus genotype G
Query: 1 ILQPLVPLI 9
IL P +PL+
Sbjct: 381 ILSPFIPLL 389
>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 1 ILQPLVPLI 9
IL P +PL+
Sbjct: 382 ILSPFIPLL 390
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 LQPLVPL 8
L PL+PL
Sbjct: 160 LSPLLPL 166
30|SequenceR|155|146|NKIPIILQPL
>sp|C_RABVA|PUTATIVE uncharacterized protein C|Rabies virus (strain PM1503/AVO1)
Query: 2 KIPIILQPL 10
K+P++LQPL
Sbjct: 49 KLPLVLQPL 57
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 1 NKIPIILQP 9
N+I I+L+P
Sbjct: 118 NQILILLEP 126
>sp|PG100_VAR67|VIRION assembly protein OPG100|Variola virus (isolate
Query: 1 NKIPII 6
NK+PI+
Sbjct: 86 NKVPIV 91
>sp|PG100_VACCC|VIRION assembly protein OPG100|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NKIPII 6
NK+PI+
Sbjct: 86 NKVPIV 91
>sp|PG100_MONPV|VIRION assembly protein OPG100|Monkeypox virus (MPXV)
Query: 1 NKIPII 6
NK+PI+
Sbjct: 86 NKVPIV 91
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PIILQPL 10
PI++ PL
Sbjct: 43 PIVISPL 49
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 4 PIILQP 9
PIIL+P
Sbjct: 251 PIILRP 256
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 4 PIILQP 9
PIIL+P
Sbjct: 251 PIILRP 256
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 4 PIILQP 9
PIIL+P
Sbjct: 251 PIILRP 256
31|SequenceR|160|151|RLNLANKIPI
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 1 RLNLANKIP 9
RLNL+ K P
Sbjct: 431 RLNLSKKYP 439
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 3 NLANKIPI 10
++AN+IP+
Sbjct: 65 DMANRIPL 72
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 3 NLANKIPI 10
++AN+IP+
Sbjct: 65 DMANRIPL 72
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 NLANKIPI 10
++AN+IP+
Sbjct: 65 DMANRIPL 72
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 NLANKIPI 10
++AN+IP+
Sbjct: 65 DMANRIPL 72
32|SequenceR|165|156|IVQRNRLNLA
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 4 RNRLNL 9
RNRLN+
Sbjct: 1362 RNRLNI 1367
Query: 2 VQRNRLNL 9
V+RN +NL
Sbjct: 1837 VRRNTINL 1844
33|SequenceR|170|161|KLTVCIVQRN
>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 KLTVCIVQ 8
+LTVCI+Q
Sbjct: 29 RLTVCIIQ 36
>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)
Query: 1 KLTVCIVQ 8
+LTVCI+Q
Sbjct: 29 RLTVCIIQ 36
>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)
Query: 2 LTVCIVQRN 10
LT CI++RN
Sbjct: 128 LTKCIIRRN 136
>sp|NEC2_HHV6Z|NUCLEAR egress protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 LTVCIVQRN 10
T CI++RN
Sbjct: 131 FTKCIIRRN 139
>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /
Query: 1 KLTVCIVQ 8
+LTVCI++
Sbjct: 29 RLTVCIIR 36
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 KLTVCIVQ 8
+LTVCI++
Sbjct: 29 RLTVCIIR 36
>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)
Query: 1 KLTVCIVQ 8
+LTVCI++
Sbjct: 29 RLTVCIIR 36
>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)
Query: 1 KLTVCIVQ 8
+LTVCI++
Sbjct: 29 RLTVCIIR 36
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 1 KLTVCIVQ 8
+LTVCI++
Sbjct: 29 RLTVCIIR 36
>sp|NEC2_HHV6U|NUCLEAR egress protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LTVCIVQRN 10
T CI++RN
Sbjct: 131 FTKCIIRRN 139
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 1 KLTVCIVQ 8
KLT+C+ +
Sbjct: 398 KLTLCLTK 405
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 1 KLTVCIVQ 8
KLT+C+ +
Sbjct: 429 KLTLCLTK 436
34|SequenceR|175|166|LHQLVKLTVC
>sp|UL96_HHV7J|PROTEIN U68|Human herpesvirus 7 (strain JI)
Query: 1 LHQLVKLTVC 10
LH+L+K T+
Sbjct: 3 LHELIKQTMS 12
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 HQLVKLTVC 10
HQ+ + VC
Sbjct: 1615 HQVKSMVVC 1623
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 LHQLVKLTVC 10
LH +V T C
Sbjct: 2374 LHDIVTGTAC 2383
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 LHQLVKL 7
LH+L+K+
Sbjct: 634 LHELIKV 640
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 LHQLVKL 7
LH+L+K+
Sbjct: 634 LHELIKV 640
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 LHQLVKL 7
LH+L+K+
Sbjct: 634 LHELIKV 640
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 LHQLVKL 7
LH+L+K+
Sbjct: 634 LHELIKV 640
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LHQLVKLTV 9
L QL+K+T+
Sbjct: 2770 LKQLIKVTL 2778
35|SequenceR|180|171|EASVVLHQLV
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 EASVVLHQL 9
EAS HQL
Sbjct: 1002 EASTDFHQL 1010
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 EASVVLHQL 9
EAS HQL
Sbjct: 1002 EASTDFHQL 1010
36|SequenceR|185|176|AKGVMEASVV
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 KGVMEASV 9
KGV+E S+
Sbjct: 1948 KGVLEFSI 1955
37|SequenceR|190|181|YYPVLAKGVM
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 YYPVLAKGVM 10
+YP +A+G++
Sbjct: 1655 FYPPVAQGII 1664
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 YYPVLAKGVM 10
YYP GV+
Sbjct: 880 YYPASCNGVL 889
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 YYPVLAKGVM 10
YYP GV+
Sbjct: 880 YYPASCNGVL 889
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 YPVLAKGV 9
YP+ KG+
Sbjct: 2060 YPITKKGI 2067
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 YPVLAKGV 9
YP+ KG+
Sbjct: 2060 YPITKKGI 2067
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 YPVLAKGV 9
YP+ KG+
Sbjct: 2060 YPITKKGI 2067
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 1 YYPVLAKG 8
YYP +KG
Sbjct: 460 YYPNSSKG 467
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 YYPVLAKGV 9
Y P++ KGV
Sbjct: 429 YNPLMDKGV 437
38|SequenceR|195|186|PLIQRYYPVL
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 PLIQRYYP 8
PLIQRY P
Sbjct: 1827 PLIQRYLP 1834
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 PLIQRYYP 8
PLIQRY P
Sbjct: 1827 PLIQRYLP 1834
>sp|BILF1_EBVB9|G-PROTEIN coupled receptor BILF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LIQRYYP 8
L+ RYYP
Sbjct: 262 LVARYYP 268
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 695 PTLEKYYP 702
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 695 PTLEKYYP 702
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 695 PTLEKYYP 702
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 695 PTLEKYYP 702
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 695 PTLEKYYP 702
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 1 PLIQRYYP 8
P +++YYP
Sbjct: 695 PTLEKYYP 702
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 PLIQRYYPV 9
PL+Q+ +PV
Sbjct: 1003 PLVQKEWPV 1011
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 PLIQRYYPV 9
PL+Q+ +PV
Sbjct: 1001 PLVQKEWPV 1009
>sp|PG029_VARV|IFN signaling evasion protein OPG029|Variola virus
Query: 3 IQRYYPV 9
IQR YP+
Sbjct: 143 IQRRYPI 149
>sp|PG029_VAR67|IFN signaling evasion protein OPG029|Variola virus (isolate
Query: 3 IQRYYPV 9
IQR YP+
Sbjct: 143 IQRRYPI 149
>sp|CEP1_HHV7J|CYTOPLASMIC envelopment protein 1|Human herpesvirus 7 (strain JI)
Query: 1 PLIQRYY 7
P+IQ YY
Sbjct: 184 PIIQLYY 190
>sp|PG029_MONPV|IFN signaling evasion protein OPG029|Monkeypox virus (MPXV)
Query: 3 IQRYYPV 9
IQR YP+
Sbjct: 143 IQRCYPI 149
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 5 RYYPV 9
RYYPV
Sbjct: 947 RYYPV 951
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 3 IQRYYPVL 10
I+R+YP L
Sbjct: 240 IERFYPFL 247
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 5 RYYPV 9
RYYP+
Sbjct: 923 RYYPI 927
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PLIQRYYPVL 10
P++ YY +L
Sbjct: 4601 PIVDSYYSLL 4610
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 5 RYYPV 9
RYYP+
Sbjct: 923 RYYPI 927
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 RYYPVL 10
+YYPV+
Sbjct: 829 KYYPVV 834
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 5 RYYPV 9
RYYP+
Sbjct: 919 RYYPI 923
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 RYYPVL 10
+YYPV+
Sbjct: 829 KYYPVV 834
>sp|ORF58_HHV8P|PROTEIN ORF58|Human herpesvirus 8 type P
Query: 1 PLIQRYY 7
P++ RYY
Sbjct: 131 PIVHRYY 137
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PLIQRYYPVL 10
P++ YY +L
Sbjct: 4624 PVVDSYYSLL 4633
>sp|YVAI_VACCC|UNCHARACTERIZED 8.2 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PLIQRYYPV 9
P +++Y+P+
Sbjct: 64 PTLEKYFPL 72
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 IQRYYPVL 10
+ +Y+PVL
Sbjct: 151 LAKYWPVL 158
39|SequenceR|200|191|FINLVPLIQR
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 INLVPLIQR 10
+NL PLIQR
Sbjct: 1823 LNLSPLIQR 1831
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 INLVPLIQR 10
+NL PLIQR
Sbjct: 1823 LNLSPLIQR 1831
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 2 INLVPLI 8
INL+PLI
Sbjct: 135 INLIPLI 141
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 FINLVPLIQR 10
IN+VPL +R
Sbjct: 1129 LINVVPLNRR 1138
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 FINLVPLIQR 10
IN+VPL +R
Sbjct: 1129 LINVVPLNRR 1138
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 INLVPLIQR 10
IN+VPL +R
Sbjct: 1130 INVVPLNRR 1138
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 INLVPLIQR 10
INLVP+ +R
Sbjct: 1132 INLVPVNRR 1140
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 INLVPLIQR 10
INLVP+ +R
Sbjct: 1132 INLVPVNRR 1140
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 INLVPLIQR 10
INLVP+ +R
Sbjct: 1132 INLVPVNRR 1140
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 INLVPLIQR 10
INLVP+ +R
Sbjct: 1132 INLVPVNRR 1140
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 INLVPLIQR 10
IN+VPL +R
Sbjct: 1130 INVVPLNRR 1138
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 LVPLIQR 10
LVP +QR
Sbjct: 1123 LVPAVQR 1129
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 FINLVP 6
FINL P
Sbjct: 880 FINLAP 885
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 FINLVP 6
FINL P
Sbjct: 880 FINLAP 885
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 FINLVP 6
FINL P
Sbjct: 880 FINLAP 885
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 FINLVP 6
FINL P
Sbjct: 880 FINLAP 885
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 FINLVP 6
FINL P
Sbjct: 880 FINLAP 885
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 FINLVP 6
F+NL+P
Sbjct: 321 FLNLIP 326
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 FINLVPLI 8
F N++PL+
Sbjct: 129 FSNMIPLL 136
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 FINLVPLI 8
F N++PL+
Sbjct: 129 FSNMIPLL 136
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1004 FVNTPPLVK 1012
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1013 FVNTPPLVK 1021
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1013 FVNTPPLVK 1021
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1003 FVNTPPLVK 1011
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 998 FVNTPPLVK 1006
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 996 FVNTPPLVK 1004
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1001 FVNTPPLVK 1009
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1000 FVNTPPLVK 1008
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1000 FVNTPPLVK 1008
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1004 FVNTPPLVK 1012
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1002 FVNTPPLVK 1010
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1000 FVNTPPLVK 1008
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1003 FVNTPPLVK 1011
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 998 FVNTPPLVK 1006
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1008 FVNTPPLVK 1016
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1002 FVNTPPLVK 1010
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1003 FVNTPPLVK 1011
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1007 FVNTPPLVK 1015
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1003 FVNTPPLVK 1011
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1007 FVNTPPLVK 1015
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1003 FVNTPPLVK 1011
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1015 FVNTPPLVK 1023
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1003 FVNTPPLVK 1011
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1015 FVNTPPLVK 1023
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1015 FVNTPPLVK 1023
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1005 FVNTPPLVK 1013
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 1003 FVNTPPLVK 1011
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 998 FVNTPPLVK 1006
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 998 FVNTPPLVK 1006
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 998 FVNTPPLVK 1006
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FINLVPLIQ 9
F+N PL++
Sbjct: 999 FVNTPPLVK 1007
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 2 INLVPLIQ 9
IN+ P+IQ
Sbjct: 73 INVFPMIQ 80
40|SequenceR|205|196|GNMNKFINLV
>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GNMNKFINLV 10
GN N FI+ V
Sbjct: 142 GNTNTFIHFV 151
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 NMNKFINLV 10
NM +F+N +
Sbjct: 391 NMTRFLNWI 399
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 NMNKFINL 9
++NKF NL
Sbjct: 288 SLNKFYNL 295
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 NMNKFINL 9
++NKF NL
Sbjct: 288 SLNKFYNL 295
>sp|US02_HCMVM|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 GNMNKFI 7
GNM++F+
Sbjct: 67 GNMSRFV 73
>sp|US02_HCMVT|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 1 GNMNKFI 7
GNM++F+
Sbjct: 67 GNMSRFV 73
>sp|US02_HCMVA|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 GNMNKFI 7
GNM++F+
Sbjct: 67 GNMSRFV 73
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 1 GNMNKFINL 9
GN N+F+++
Sbjct: 405 GNFNQFVSI 413
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 1 GNMNKFINL 9
GN N+F+++
Sbjct: 405 GNFNQFVSI 413
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 1 GNMNKFINL 9
GN N+F+++
Sbjct: 405 GNFNQFVSI 413
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 1 GNMNKFINL 9
GN N+F+++
Sbjct: 405 GNFNQFVSI 413
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 3 MNKFINLV 10
+NKFIN V
Sbjct: 113 VNKFINSV 120
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 NMNKFIN 8
N+N F+N
Sbjct: 413 NLNVFVN 419
41|SequenceR|210|201|PLSYSGNMNK
>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P
Query: 1 PLSYSGN 7
PLSY+G+
Sbjct: 277 PLSYTGS 283
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 LSYSGNMNK 10
L Y+G+MN+
Sbjct: 1983 LDYTGSMNQ 1991
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 LSYSGNMNK 10
L Y+G+MN+
Sbjct: 1982 LEYTGSMNQ 1990
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 YSGNMNK 10
YSGN N+
Sbjct: 2920 YSGNANE 2926
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 YSGNMNK 10
YSGN N+
Sbjct: 2920 YSGNANE 2926
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 YSGNM 8
YSGNM
Sbjct: 1387 YSGNM 1391
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 PLSYSGNMNK 10
P +YS MNK
Sbjct: 1911 PAAYSLIMNK 1920
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 PLSYSGNMNK 10
P +YS MNK
Sbjct: 1910 PAAYSLIMNK 1919
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 PLSYSGNMNK 10
P +YS MNK
Sbjct: 1910 PAAYSLIMNK 1919
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 PLSYSGNMNK 10
P +YS MNK
Sbjct: 1910 PAAYSLIMNK 1919
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 PLSYSGNMNK 10
P +YS MNK
Sbjct: 1911 PAAYSLIMNK 1920
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 PLSYSGNMNK 10
P +YS MNK
Sbjct: 1911 PAAYSLIMNK 1920
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 SYSGNMNK 10
SY N+NK
Sbjct: 1930 SYDTNLNK 1937
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 PLSYSGNM 8
P+S+SG++
Sbjct: 564 PVSFSGSV 571
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 1 PLSYSGN 7
PLS+SG+
Sbjct: 378 PLSFSGS 384
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 SYSGNMNK 10
SY N+NK
Sbjct: 1930 SYDTNLNK 1937
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 4 YSGNMNK 10
YSG NK
Sbjct: 628 YSGKQNK 634
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 1 PLSYSGNMNK 10
PL GN N+
Sbjct: 101 PLQIEGNQNQ 110
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 1 PLSYSGNMNK 10
PL GN N+
Sbjct: 101 PLQIEGNQNQ 110
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 1 PLSYSGNMNK 10
PL GN N+
Sbjct: 101 PLQIEGNQNQ 110
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 1 PLSYSGNMNK 10
PL GN N+
Sbjct: 101 PLQIEGNQNQ 110
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 1 PLSYSGNMNK 10
PL GN N+
Sbjct: 101 PLQIEGNQNQ 110
42|SequenceR|215|206|SCELRPLSYS
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 SCELRPLSY 9
SC L P+SY
Sbjct: 1078 SCTLPPVSY 1086
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 SCELRPLSY 9
SC + PLS+
Sbjct: 1101 SCTMPPLSF 1109
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 4 LRPLSYS 10
LRPLSY+
Sbjct: 169 LRPLSYT 175
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 4 LRPLSYS 10
+RPLSY+
Sbjct: 144 MRPLSYT 150
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SCELRPLSY 9
+C L PL Y
Sbjct: 446 ACRLNPLKY 454
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 SCELRPLS 8
S E+RPLS
Sbjct: 1095 SLEVRPLS 1102
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 SCELRPLS 8
S E+RPLS
Sbjct: 1095 SLEVRPLS 1102
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 SCELRPLS 8
S E+RPLS
Sbjct: 1095 SLEVRPLS 1102
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 ELRPLS 8
E+RPLS
Sbjct: 1108 EIRPLS 1113
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 ELRPLS 8
E+RPLS
Sbjct: 1108 EIRPLS 1113
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 ELRPLS 8
E+RPLS
Sbjct: 1108 EIRPLS 1113
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 ELRPLS 8
E+RPLS
Sbjct: 1108 EIRPLS 1113
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 1 SCELRPLSY 9
+C L PL Y
Sbjct: 447 ACRLNPLRY 455
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 SCELRPLSY 9
SC + P+S+
Sbjct: 1093 SCTMPPVSF 1101
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 SCELRPLSY 9
SC + P+S+
Sbjct: 1093 SCTMPPVSF 1101
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 SCELRPLSY 9
SC + P+S+
Sbjct: 1093 SCTMPPVSF 1101
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 SCELRPLSY 9
SC + P+S+
Sbjct: 1093 SCTMPPVSF 1101
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 SCELRPLSY 9
SC + P+S+
Sbjct: 1093 SCTMPPVSF 1101
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 SCELRPLSY 9
SC + P+S+
Sbjct: 1093 SCTMPPVSF 1101
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 SCELRPLSY 9
SC + P+S+
Sbjct: 1093 SCTMPPVSF 1101
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 SCELRPLSY 9
SC + P+S+
Sbjct: 1093 SCTMPPVSF 1101
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 SCELRPLSY 9
SC + P+S+
Sbjct: 1093 SCTMPPVSF 1101
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 SCELRPLSY 9
SC + P+S+
Sbjct: 1093 SCTMPPVSF 1101
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 SCELRPLSY 9
SC + P+S+
Sbjct: 1086 SCTMPPVSF 1094
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CELRPLSY 9
CE RPL +
Sbjct: 1014 CEGRPLYF 1021
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 SCELRPLS 8
+C+ RPLS
Sbjct: 235 ACKSRPLS 242
>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CELRPLS 8
C L PLS
Sbjct: 531 CRLTPLS 537
43|SequenceR|220|211|AMIAGSCELR
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 MIAGSCELR 10
+IAG ELR
Sbjct: 3795 LIAGCVELR 3803
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 2 MIAGSCELR 10
++AG+C+ R
Sbjct: 1045 LLAGACDRR 1053
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 AMIAGSCE 8
A +AG CE
Sbjct: 2965 AHLAGRCE 2972
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 AMIAGSCE 8
A +AG CE
Sbjct: 2961 AHLAGRCE 2968
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 3 IAGSCE 8
IAG CE
Sbjct: 333 IAGPCE 338
44|SequenceR|225|216|DLNCRAMIAG
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 DLNCRAM 7
D+NC A+
Sbjct: 1789 DVNCEAL 1795
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 3 NCRAMI 8
NCR+M+
Sbjct: 379 NCRSML 384
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 1 DLNCRAMIAG 10
+ NC +I+G
Sbjct: 301 EFNCTHLISG 310
45|SequenceR|230|221|SSGLHDLNCR
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 LHDLNC 9
LHDLNC
Sbjct: 607 LHDLNC 612
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 LHDLNCR 10
LHDL+C+
Sbjct: 1174 LHDLSCK 1180
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 LHDLNCR 10
LHDL+C+
Sbjct: 1174 LHDLSCK 1180
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 LHDLNCR 10
LHDL+C+
Sbjct: 1170 LHDLSCK 1176
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 LHDLNC 9
+HDLNC
Sbjct: 751 MHDLNC 756
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SSGLHDLNCR 10
++ H+LNC+
Sbjct: 320 TASRHELNCK 329
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SSGLHDLNCR 10
++ H+LNC+
Sbjct: 320 TASRHELNCK 329
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 SSGLHDLNCR 10
S+ LH++ C+
Sbjct: 1391 SAALHNVKCK 1400
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 SSGLHDLNCR 10
S+ LH++ C+
Sbjct: 1401 SAALHNVKCK 1410
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 SSGLHDLNCR 10
S+ LH++ C+
Sbjct: 1400 SAALHNVKCK 1409
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 SSGLHDLNCR 10
S+ LH++ C+
Sbjct: 1392 SAALHNVKCK 1401
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 SSGLHDLNCR 10
++ LH++ C+
Sbjct: 1405 AAALHNIKCK 1414
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 SSGLHDLNCR 10
++ LH++ C+
Sbjct: 1402 AAALHNIKCK 1411
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 LHDLNC 9
LH NC
Sbjct: 384 LHSFNC 389
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GLHDLNCR 10
G H L CR
Sbjct: 145 GYHGLRCR 152
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GLHDLNCR 10
G H L CR
Sbjct: 145 GYHGLRCR 152
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 GLHDLNCR 10
G H L CR
Sbjct: 145 GYHGLRCR 152
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 SSGLHDLNCR 10
++ LH++ C+
Sbjct: 1403 AAALHNVKCK 1412
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 SSGLHDLNCR 10
++ LH++ C+
Sbjct: 1399 AAALHNVRCK 1408
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 1 SSGLHDLN 8
S GL+D+N
Sbjct: 2 SCGLNDVN 9
46|SequenceR|235|226|STPPDSSGLH
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 1 STPPDSSG 8
STPPDS G
Sbjct: 201 STPPDSPG 208
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 1 STPPDSSG 8
STPPDS G
Sbjct: 201 STPPDSPG 208
>sp|VE7_HPV6B|PROTEIN E7|Human papillomavirus type 6b
Query: 3 PPDSSGLH 10
PPD GLH
Sbjct: 17 PPDPVGLH 24
>sp|VE7_HPV11|PROTEIN E7|Human papillomavirus 11
Query: 3 PPDSSGLH 10
PPD GLH
Sbjct: 17 PPDPVGLH 24
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 1 STPPDSSG 8
STPPDS G
Sbjct: 201 STPPDSPG 208
>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24
Query: 1 STPPDSSG 8
STPPDS G
Sbjct: 201 STPPDSPG 208
>sp|VE7_HPV55|PROTEIN E7|Human papillomavirus type 55
Query: 3 PPDSSGLH 10
PPD GLH
Sbjct: 17 PPDPVGLH 24
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 PDSSGL 9
PDSSGL
Sbjct: 2804 PDSSGL 2809
>sp|VE7_HPV6A|PROTEIN E7|Human papillomavirus type 6a
Query: 3 PPDSSGLH 10
PPD GLH
Sbjct: 17 PPDPVGLH 24
>sp|VE7_HPV44|PROTEIN E7|Human papillomavirus 44
Query: 3 PPDSSGLH 10
PPD GLH
Sbjct: 17 PPDPVGLH 24
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 1 STPPDSSG 8
STPP+S G
Sbjct: 201 STPPESPG 208
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 STPPD 5
STPPD
Sbjct: 867 STPPD 871
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 STPPDS 6
S+PPDS
Sbjct: 253 SSPPDS 258
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 TPPDSSGLH 10
TP SSGLH
Sbjct: 487 TPNTSSGLH 495
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 STPPDS 6
S+PPDS
Sbjct: 252 SSPPDS 257
>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 2 TPPDSSG 8
TPP SS
Sbjct: 221 TPPSSSA 227
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 1 STPPDSSG 8
STPP +SG
Sbjct: 408 STPPRASG 415
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 STPPDSSG 8
STPP +SG
Sbjct: 403 STPPRASG 410
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 TPPDSSGL 9
TP D +GL
Sbjct: 1573 TPQDRTGL 1580
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 2 TPPDS 6
TPPDS
Sbjct: 294 TPPDS 298
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 1 STPPDSSG 8
STPP+S G
Sbjct: 201 STPPESPG 208
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 1 STPPDSSGL 9
S PP SG+
Sbjct: 452 SCPPKDSGV 460
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 1 STPPDSSGLH 10
+ PPD+S L
Sbjct: 552 NMPPDTSWLQ 561
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 1 STPPDSS 7
ST PDSS
Sbjct: 374 STSPDSS 380
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 1 STPPDSSGL 9
+T P++SGL
Sbjct: 245 TTSPETSGL 253
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 1 STPPDSSGL 9
S PPD L
Sbjct: 23 SAPPDDDDL 31
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 STPPDSSGL 9
S PPD L
Sbjct: 23 SAPPDDDDL 31
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 STPPDSSGL 9
+TPPD G+
Sbjct: 584 NTPPDLVGV 592
>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 TPPDSSG 8
TP DS+G
Sbjct: 356 TPDDSTG 362
>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 TPPDSSG 8
TP DS+G
Sbjct: 356 TPDDSTG 362
>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 TPPDSSG 8
TP DS+G
Sbjct: 356 TPDDSTG 362
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 1 STPPDSSGL 9
S PPD L
Sbjct: 23 SAPPDDDDL 31
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 STPPDSSGL 9
+TPPD G+
Sbjct: 584 NTPPDLVGV 592
>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 TPPDSSG 8
TP DS+G
Sbjct: 356 TPDDSTG 362
>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 STPPDSSGL 9
S PPD L
Sbjct: 23 SAPPDDDDL 31
47|SequenceR|240|231|AVQSASTPPD
***** No hits found ******
48|SequenceR|245|236|NVIIEAVQSA
>sp|KTHY_VACCT|THYMIDYLATE kinase|Vaccinia virus (strain Tian Tan)
Query: 1 NVIIEAVQS 9
N++IEA+ +
Sbjct: 186 NIVIEAIHT 194
>sp|KTHY_VACCC|THYMIDYLATE kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NVIIEAVQS 9
N++IEA+ +
Sbjct: 186 NIVIEAIHT 194
>sp|KTHY_VACCA|THYMIDYLATE kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NVIIEAVQS 9
N++IEA+ +
Sbjct: 186 NIVIEAIHT 194
>sp|KTHY_CWPXG|THYMIDYLATE kinase|Cowpox virus (strain GRI-90 /
Query: 1 NVIIEAVQS 9
N++IEA+ +
Sbjct: 186 NIVIEAIHT 194
>sp|KTHY_CWPXB|THYMIDYLATE kinase|Cowpox virus (strain Brighton Red)
Query: 1 NVIIEAVQS 9
N++IEA+ +
Sbjct: 186 NIVIEAIHT 194
>sp|KTHY_VARV|THYMIDYLATE kinase|Variola virus
Query: 1 NVIIEAVQS 9
N++IEA+ +
Sbjct: 187 NIVIEAIHT 195
>sp|KTHY_VAR67|THYMIDYLATE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 NVIIEAVQS 9
N++IEA+ +
Sbjct: 187 NIVIEAIHT 195
>sp|KTHY_MONPV|THYMIDYLATE kinase|Monkeypox virus (MPXV)
Query: 1 NVIIEAVQS 9
N++IEA+ +
Sbjct: 186 NIVIEAIHT 194
49|SequenceR|250|241|IGDGSNVIIE
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 GDGSNVIIE 10
GDG N ++E
Sbjct: 401 GDGENNVVE 409
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 GDGSNVIIE 10
GDG N ++E
Sbjct: 401 GDGENNVVE 409
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 3 DGSNVIIE 10
DGS V++E
Sbjct: 118 DGSKVVVE 125
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GDGSNVIIE 10
GD NV+IE
Sbjct: 32 GDWENVLIE 40
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GDGSNVIIE 10
GD NV+IE
Sbjct: 32 GDWENVLIE 40
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 2 GDGSNVIIE 10
G+G+ VII+
Sbjct: 198 GNGAEVIID 206
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 IGDGSNVIIE 10
+G GSN+ +E
Sbjct: 248 MGKGSNLEVE 257
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 IGDGSNVIIE 10
+G GSN+ +E
Sbjct: 248 MGKGSNLEVE 257
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 1 IGDGSNVI 8
+GD SN+I
Sbjct: 162 LGDISNII 169
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IGDGSNVI 8
+GD SN+I
Sbjct: 162 LGDISNII 169
50|SequenceR|255|246|QQSYDIGDGS
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 QSYDIGD 8
+SYD+GD
Sbjct: 141 KSYDLGD 147
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 QSYDIGD 8
+SYD+GD
Sbjct: 141 KSYDLGD 147
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 4 YDIGDG 9
+DIGDG
Sbjct: 860 HDIGDG 865
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 YDIGDGS 10
Y IGDG+
Sbjct: 1121 YQIGDGA 1127
>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)
Query: 1 QQSYDIGD 8
QQSYD D
Sbjct: 69 QQSYDCLD 76
>sp|ORF0_VZVD|MEMBRANE protein 0|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QQSYDIGD 8
QQSYD D
Sbjct: 69 QQSYDCLD 76
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 QSYDIGD 8
+S+D+GD
Sbjct: 141 KSFDLGD 147
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 QSYDIGD 8
+S+D+GD
Sbjct: 141 KSFDLGD 147
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QSYDIGDGS 10
+SY +G GS
Sbjct: 333 ESYRLGQGS 341
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 QSYDIGDGS 10
+SY +G GS
Sbjct: 333 ESYRLGQGS 341
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QSYDIGDGS 10
+SY +G GS
Sbjct: 333 ESYRLGQGS 341
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 5 DIGDG 9
DIGDG
Sbjct: 91 DIGDG 95
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 5 DIGDG 9
DIGDG
Sbjct: 91 DIGDG 95
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 5 DIGDG 9
DIGDG
Sbjct: 91 DIGDG 95
51|SequenceR|260|251|INERKQQSYD
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NERKQQSYD 10
N+++QQ YD
Sbjct: 559 NQQQQQRYD 567
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NERKQQSYD 10
N+++QQ YD
Sbjct: 559 NQQQQQRYD 567
>sp|PHOSP_ABLVB|PHOSPHOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 INERKQQSYD 10
INE K QS++
Sbjct: 58 INEAKPQSFE 67
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 5 KQQSYD 10
KQQ YD
Sbjct: 1293 KQQGYD 1298
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 3 ERKQQSYD 10
ERKQQS +
Sbjct: 756 ERKQQSLN 763
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 INERKQQSYD 10
++ RK++SY+
Sbjct: 95 LSSRKRRSYE 104
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 NERKQQSY 9
+E+K+Q+Y
Sbjct: 796 SEKKEQAY 803
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 INERKQQSYD 10
++ RK++S+D
Sbjct: 95 LSSRKRRSHD 104
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 INERKQQSYD 10
++ RK++S+D
Sbjct: 95 LSSRKRRSHD 104
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 INERKQQSYD 10
++ RK++S+D
Sbjct: 95 LSSRKRRSHD 104
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 INERKQQSYD 10
++ RK++S+D
Sbjct: 95 LSSRKRRSHD 104
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 INERKQQSYD 10
++ RK++S+D
Sbjct: 95 LSSRKRRSHD 104
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 INERKQQSYD 10
++ RK++S+D
Sbjct: 95 LSSRKRRSHD 104
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 ERKQQSY 9
E+K+Q+Y
Sbjct: 797 EKKEQAY 803
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 INERKQQSYD 10
NE+KQ + D
Sbjct: 393 FNEKKQWAVD 402
52|SequenceR|265|256|QILDGINERK
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 QILDGINERK 10
Q+LDG+N+RK
Sbjct: 91 QMLDGLNKRK 100
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 1 QILDGIN 7
+ILDGIN
Sbjct: 57 RILDGIN 63
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 ILDGINER 9
ILDGI+E+
Sbjct: 569 ILDGISEQ 576
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 ILDGINER 9
ILDGI+E+
Sbjct: 569 ILDGISEQ 576
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 ILDGINERK 10
+LD +N+RK
Sbjct: 89 MLDSVNKRK 97
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 QILDGINE 8
QILDGI++
Sbjct: 578 QILDGISD 585
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 QILDGINE 8
QILDGI++
Sbjct: 581 QILDGISD 588
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 QILDGIN 7
+ILDGIN
Sbjct: 73 RILDGIN 79
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 1 QILDGIN 7
+ILDGIN
Sbjct: 73 RILDGIN 79
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 QILDGIN 7
+ILDGIN
Sbjct: 74 RILDGIN 80
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 QILDGIN 7
+ILDGIN
Sbjct: 73 RILDGIN 79
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 1 QILDGIN 7
+ILDGIN
Sbjct: 73 RILDGIN 79
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QILDGIN 7
Q+L+G+N
Sbjct: 172 QVLEGVN 178
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 1 QILDGIN 7
Q+L+G+N
Sbjct: 172 QVLEGVN 178
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 ILDGINERK 10
+LD +N+R+
Sbjct: 85 LLDSLNKRR 93
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 ILDGINE 8
ILDGI++
Sbjct: 569 ILDGISQ 575
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 ILDGINE 8
ILDGI++
Sbjct: 569 ILDGISQ 575
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 ILDGINERK 10
+LD +N R+
Sbjct: 85 LLDSLNRRR 93
53|SequenceR|270|261|AELTEQILDG
>sp|VE6_HPV09|PROTEIN E6|Human papillomavirus 9
Query: 3 LTEQILD 9
LTEQI+D
Sbjct: 3 LTEQIMD 9
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 AELTEQIL 8
AE+T+QIL
Sbjct: 744 AEITKQIL 751
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 AELTEQILDG 10
AE+ ++LDG
Sbjct: 1875 AEIVGRLLDG 1884
54|SequenceR|275|266|GYREFAELTE
>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)
Query: 1 GYREFAEL 8
GY +FAEL
Sbjct: 288 GYPQFAEL 295
>sp|A53_VACCC|TRUNCATED secreted TNF-receptor-like protein A53|Vaccinia virus (strain
Query: 1 GYREFAE 7
GY+EFA+
Sbjct: 7 GYKEFAD 13
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 GYREFAELTE 10
GY E AE+ E
Sbjct: 305 GYPESAEIVE 314
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 1 GYREFAELTE 10
GY E AE+ E
Sbjct: 305 GYPESAEIVE 314
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GYREFAELTE 10
GY E AE+ E
Sbjct: 305 GYPESAEIVE 314
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GYREFAELTE 10
GY E AE+ E
Sbjct: 305 GYPESAEIVE 314
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 1 GYREFAELTE 10
GY E AE+ E
Sbjct: 305 GYPESAEIVE 314
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 1 GYREFAELTE 10
GY E AE+ E
Sbjct: 305 GYPESAEIVE 314
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GYREFAE 7
GY +FAE
Sbjct: 6213 GYTDFAE 6219
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 2 YREFAELT 9
Y++F +LT
Sbjct: 306 YKDFTQLT 313
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YREFAELT 9
Y++F +LT
Sbjct: 306 YKDFTQLT 313
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GYREFAELT 9
G EFAE+T
Sbjct: 541 GGMEFAEVT 549
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GYREFAELT 9
G EFAE+T
Sbjct: 541 GGMEFAEVT 549
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 EFAELTE 10
EF E+TE
Sbjct: 72 EFMEITE 78
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 EFAELTE 10
EF E+TE
Sbjct: 72 EFMEITE 78
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 EFAELTE 10
EF E+TE
Sbjct: 72 EFMEITE 78
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 1 GYREFAELTE 10
G++ + E+TE
Sbjct: 385 GFKIYTEVTE 394
55|SequenceR|280|271|FANEGGYREF
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 FANEGGYREF 10
FA+ YREF
Sbjct: 1014 FADWATYREF 1023
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 FANEGGYREF 10
FA+ YREF
Sbjct: 1013 FADWATYREF 1022
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 FANEGGYREF 10
FA+ YREF
Sbjct: 1012 FADWATYREF 1021
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 FANEGGYREF 10
FA+ YREF
Sbjct: 1033 FADWATYREF 1042
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 ANEGGYREF 10
AN+G +R+F
Sbjct: 1099 ANDGWFRKF 1107
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 ANEGGYREF 10
AN+G +R+F
Sbjct: 1100 ANDGWFRKF 1108
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ANEGGYREF 10
NEG YR +
Sbjct: 743 GNEGAYRSW 751
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 FANEGGYREF 10
F++EG Y E
Sbjct: 321 FSDEGTYHEL 330
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 FANEGGYREF 10
F++EG Y E
Sbjct: 321 FSDEGTYHEL 330
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 FANEGGYREF 10
F++EG Y E
Sbjct: 321 FSDEGTYHEL 330
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FANEGGYRE 9
F NEG + E
Sbjct: 455 FENEGSFNE 463
>sp|NS2_HRSVB|NON-STRUCTURAL protein 2|Human respiratory syncytial virus B
Query: 1 FANEGGYRE 9
F N GG+ E
Sbjct: 96 FINHGGFLE 104
>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 NEGGYREF 10
+EGGY +F
Sbjct: 35 SEGGYSQF 42
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 ANEGGYRE 9
ANE GY E
Sbjct: 2260 ANELGYLE 2267
56|SequenceR|285|276|YKINIFANEG
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 2 KINIFANE 9
KIN FANE
Sbjct: 345 KINNFANE 352
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 2 KINIFANE 9
KIN FANE
Sbjct: 345 KINNFANE 352
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 2 KINIFANE 9
KIN FANE
Sbjct: 345 KINNFANE 352
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 2 KINIFANE 9
KIN FANE
Sbjct: 345 KINNFANE 352
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 2 KINIFANE 9
KIN FANE
Sbjct: 345 KINNFANE 352
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 YKINIF 6
Y++NIF
Sbjct: 1844 YRVNIF 1849
Query: 1 YKINIFA 7
+K+NI+A
Sbjct: 575 HKVNIYA 581
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 YKINIFANEG 10
Y+I + +NEG
Sbjct: 400 YQIPVRSNEG 409
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 YKINIFANEG 10
Y+I + +NEG
Sbjct: 400 YQIPVRSNEG 409
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 YKINIF 6
YK+NI+
Sbjct: 893 YKLNIY 898
>sp|VLTF1_VAR67|LATE transcription factor 1|Variola virus (isolate
Query: 1 YKINIF 6
+KINIF
Sbjct: 250 FKINIF 255
>sp|VLTF1_VACCA|LATE transcription factor 1|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YKINIF 6
+KINIF
Sbjct: 250 FKINIF 255
>sp|VLTF1_VACCC|LATE transcription factor 1|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YKINIF 6
+KINIF
Sbjct: 250 FKINIF 255
57|SequenceR|290|281|YTPVVYKINI
>sp|US8A_HHV1F|US8.5 protein|Human herpesvirus 1 (strain F)
Query: 1 YTPVVYKINI 10
YTPV IN+
Sbjct: 15 YTPVAMGINL 24
>sp|US8A_HHV11|PROTEIN US8.5|Human herpesvirus 1 (strain 17)
Query: 1 YTPVVYKINI 10
YTPV IN+
Sbjct: 15 YTPVAMGINL 24
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 809 PILYKIN 815
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 804 PILYKIN 810
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 796 PILYKIN 802
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 797 PILYKIN 803
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 807 PILYKIN 813
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 807 PILYKIN 813
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 813 PILYKIN 819
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 807 PILYKIN 813
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 807 PILYKIN 813
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 796 PILYKIN 802
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 796 PILYKIN 802
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 797 PILYKIN 803
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 797 PILYKIN 803
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 PVVYKIN 9
P++YKIN
Sbjct: 807 PILYKIN 813
>sp|US8A_HHV2H|PROTEIN US8.5|Human herpesvirus 2 (strain HG52)
Query: 1 YTPVVYKINI 10
YTP+ +N+
Sbjct: 15 YTPIARGVNL 24
>sp|NS2_HRSV|NON-STRUCTURAL protein 2|Human respiratory syncytial virus
Query: 1 YTPVVYKINI 10
+TP++YK ++
Sbjct: 113 HTPIIYKYDL 122
>sp|NS2_HRSVA|NON-STRUCTURAL protein 2|Human respiratory syncytial virus A
Query: 1 YTPVVYKINI 10
+TP++YK ++
Sbjct: 113 HTPIIYKYDL 122
>sp|NS2_HRSVB|NON-STRUCTURAL protein 2|Human respiratory syncytial virus B
Query: 1 YTPVVYKINI 10
+TP++YK ++
Sbjct: 113 HTPIIYKYDL 122
>sp|NS2_HRSV1|NON-STRUCTURAL protein 2|Human respiratory syncytial virus B
Query: 1 YTPVVYKINI 10
+TP++YK ++
Sbjct: 113 HTPIIYKYDL 122
>sp|PHOSP_VSIVS|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 TPVVYKI 8
TP VYK+
Sbjct: 174 TPDVYKV 180
>sp|PHOSP_VSIVN|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 TPVVYKI 8
TP VYK+
Sbjct: 174 TPDVYKV 180
>sp|PHOSP_VSIVM|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 TPVVYKI 8
TP VYK+
Sbjct: 174 TPDVYKV 180
>sp|PHOSP_VSIVG|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 TPVVYKI 8
TP VYK+
Sbjct: 174 TPDVYKV 180
>sp|PHOSP_VSIVC|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 TPVVYKI 8
TP VYK+
Sbjct: 174 TPDVYKV 180
>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 TPVVYKI 8
TP VYK+
Sbjct: 174 TPDVYKV 180
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YTPVVYKINI 10
Y P YK++I
Sbjct: 381 YRPSSYKMDI 390
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 PVVYKINI 10
PV Y+I+I
Sbjct: 133 PVTYQISI 140
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 VVYKINI 10
+ YK+NI
Sbjct: 471 ITYKVNI 477
58|SequenceR|296|286|NLLCSEYTPVV
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NLLCSEYTP 9
+LLC+ Y P
Sbjct: 1187 SLLCASYEP 1195
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 NLLCSEYTP 9
+LLC+ Y P
Sbjct: 1187 SLLCASYEP 1195
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 LLCSEYTPVV 11
LLC TP+V
Sbjct: 178 LLCLSATPIV 187
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 NLLCSEYTP 9
+LLC+ Y P
Sbjct: 1187 SLLCASYEP 1195
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 NLLCSEYTP 9
+LLC+ Y P
Sbjct: 1187 SLLCASYEP 1195
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NLLCSEYTP 9
+LLC+ Y P
Sbjct: 1187 SLLCASYEP 1195
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 LCSEYTPVV 11
L S+YTPV+
Sbjct: 1360 LLSKYTPVM 1368
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 LCSEYTPVV 11
L S+YTPV+
Sbjct: 1360 LLSKYTPVM 1368
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 LLCSEY 7
+LCSEY
Sbjct: 1553 VLCSEY 1558
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 LLCSEY 7
+LCSEY
Sbjct: 1555 VLCSEY 1560
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 LLCSEY 7
+LCSEY
Sbjct: 1555 VLCSEY 1560
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 LLCSEY 7
+LCSEY
Sbjct: 1555 VLCSEY 1560
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 LLCSEY 7
+LCSEY
Sbjct: 1555 VLCSEY 1560
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 LCSEYT 8
LCS+YT
Sbjct: 309 LCSQYT 314
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 LCSEYT 8
LCS+YT
Sbjct: 309 LCSQYT 314
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 LLCSEY 7
+LCSEY
Sbjct: 1555 VLCSEY 1560
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 2 LLCSEYTPVV 11
LLC Y P++
Sbjct: 296 LLCQNYDPLL 305
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 2 LLCSEYTPVV 11
LLC Y P++
Sbjct: 296 LLCQNYDPLL 305
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 LCSEYT 8
LCS+YT
Sbjct: 308 LCSKYT 313
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 LCSEYT 8
LCS+YT
Sbjct: 308 LCSKYT 313
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 NLLCSEYTPVV 11
NLL + +TP++
Sbjct: 3025 NLLTNMFTPLI 3035
Query: 2 LLCSEYTPV 10
+C EY P+
Sbjct: 3760 FMCVEYCPI 3768
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 NLLCSEYTPVV 11
NLL + +TP++
Sbjct: 3025 NLLTNMFTPLI 3035
Query: 2 LLCSEYTPV 10
+C EY P+
Sbjct: 3760 FMCVEYCPI 3768
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 2 LLCSEYTPV 10
L+C YTP+
Sbjct: 182 LVCMLYTPL 190
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 2 LLCSEYTPV 10
L+C YTP+
Sbjct: 181 LVCMLYTPL 189
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 NLLCSEYTP 9
N +CS TP
Sbjct: 426 NPVCSRITP 434
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 LCSEY 7
LCSEY
Sbjct: 1773 LCSEY 1777
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 LCSEY 7
LCSEY
Sbjct: 1773 LCSEY 1777
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 LCSEY 7
LCSEY
Sbjct: 1773 LCSEY 1777
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 2 LLCSEYTPV 10
+ CSE +P+
Sbjct: 213 ITCSENSPI 221
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 NLLCSEYTPVV 11
N+L + TP+V
Sbjct: 2422 NVLTKDQTPIV 2432
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 NLLCSEYTPVV 11
N+L + TP+V
Sbjct: 2422 NVLTKDQTPIV 2432
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 2 LLCSEYTPV 10
+ CSE +P+
Sbjct: 213 ITCSENSPI 221
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 2 LLCSEYTPVV 11
++C TP+V
Sbjct: 179 MICLSATPIV 188
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 LLCSEYTPVV 11
++C TP+V
Sbjct: 179 MICLSATPIV 188
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LLCSEYTPVV 11
++C TP+V
Sbjct: 179 MICLSATPIV 188
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LLCSEYTPVV 11
++C TP+V
Sbjct: 179 MICLSATPIV 188
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 2 LLCSEYTPVV 11
++C TP+V
Sbjct: 179 MICLSATPIV 188
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 NLLCSEY 7
+L CSEY
Sbjct: 557 SLSCSEY 563
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LCSEYTP 9
+CS+Y P
Sbjct: 610 ICSKYLP 616
>sp|VE8E2_HPV35|PROTEIN E8^E2C|Human papillomavirus 35
Query: 4 CSEYTPVV 11
CS TP+V
Sbjct: 95 CSTTTPIV 102
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 2 LLCSEYTPVV 11
++C TP+V
Sbjct: 179 MICLSATPIV 188
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 2 LLCSEYTPVV 11
L CS YT V+
Sbjct: 587 LDCSRYTAVM 596
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 2 LLCSEYTPVV 11
L CS YT V+
Sbjct: 587 LDCSRYTAVM 596
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 4 CSEYTPVV 11
C + TP+V
Sbjct: 277 CGDTTPIV 284
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 NLLCSEYTPVV 11
NL+ SEY V
Sbjct: 5 NLILSEYLSFV 15
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 NLLCSEYTPVV 11
NL+ SEY V
Sbjct: 5 NLILSEYLSFV 15
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 NLLCSEYTPVV 11
NL+ SEY V
Sbjct: 5 NLILSEYLSFV 15
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 NLLCSEYTPVV 11
NL+ SEY V
Sbjct: 5 NLILSEYLSFV 15
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 NLLCSEYTPVV 11
NL+ SEY V
Sbjct: 5 NLILSEYLSFV 15
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 NLLCSEYTPVV 11
NL+ SEY V
Sbjct: 5 NLILSEYLSFV 15
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 NLLCSEYTPVV 11
NL+ + +TP+V
Sbjct: 3002 NLIANIFTPLV 3012
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 NLLCSEYTPVV 11
NL+ + +TP+V
Sbjct: 3002 NLIANIFTPLV 3012
>sp|VP8_VACCC|CORE protein VP8|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 SEYTPV 10
+EYTP+
Sbjct: 161 TEYTPI 166
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 3 LCSEYT 8
LC EYT
Sbjct: 1755 LCFEYT 1760
>sp|VP8_VARV|CORE protein VP8|Variola virus
Query: 5 SEYTPV 10
+EYTP+
Sbjct: 161 TEYTPI 166
>sp|VP8_VAR67|CORE protein VP8|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 SEYTPV 10
+EYTP+
Sbjct: 161 TEYTPI 166
>sp|VP8_MONPV|CORE protein VP8|Monkeypox virus (MPXV)
Query: 5 SEYTPV 10
+EYTP+
Sbjct: 161 TEYTPI 166
>sp|VE6_HPV2A|PROTEIN E6|Human papillomavirus type 2a
Query: 2 LLCSEY 7
LLC EY
Sbjct: 13 LLCKEY 18
THE END