PACRG_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|LSLTEKEAVM

>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSLTEKEAV 9
LS+TEKE +
Sbjct: 438 LSITEKEII 446




2|SequenceR|15|6|DPCKNLSLTE

>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PCKNLSLTE 10
PC NLS +E
Sbjct: 606 PCDNLSGSE 614


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DPCKNLSLTE 10
+PC NL+ +E
Sbjct: 605 EPCDNLTGSE 614


>sp|DGGGP_METM7|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 2 PCKNLSLTE 10
P K LSLT+
Sbjct: 76 PSKRLSLTD 84


>sp|FEN_META3|FLAP endonuclease 1|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PCKNLSLTE 10
P KN+S+T+
Sbjct: 10 PKKNISITD 18




3|SequenceR|20|11|RKPMKDPCKN

>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 2 KPMKDPCK 9
KP++D C+
Sbjct: 145 KPLRDACR 152


>sp|Y2648_METMA|UPF0280 protein MM_2648|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RKPMKDP 7
RKP+K+P
Sbjct: 6 RKPVKEP 12


>sp|Y426_METJA|UNCHARACTERIZED protein MJ0426|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKPMKDPCK 9
+ P+K+ CK
Sbjct: 119 KNPIKESCK 127




4|SequenceR|25|16|ALLKTRKPMK

>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM

Query: 1 ALLKTRKPM 9
ALL+ RKP+
Sbjct: 71 ALLRLRKPL 79


>sp|AGLC_METVO|DOLICHYL N-acetyl-alpha-D-glucosaminyl phosphate

Query: 2 LLKTRKPM 9
L+KTR+P+
Sbjct: 283 LIKTREPL 290


>sp|RL18_KORCO|LARGE ribosomal subunit protein uL18|Korarchaeum cryptofilum (strain

Query: 1 ALLKTRKP 8
ALLK+RKP
Sbjct: 26 ALLKSRKP 33


>sp|DHYS_HALSA|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LLKTRKPMK 10
++KT KP K
Sbjct: 111 IIKTAKPFK 119


>sp|DHYS_HALS3|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LLKTRKPMK 10
++KT KP K
Sbjct: 111 IIKTAKPFK 119




5|SequenceR|30|21|PLPQQALLKT

>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PLPQQALLK 9
PLPQ+AL K
Sbjct: 168 PLPQEALQK 176


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PLPQQALLKT 10
PLP + L+KT
Sbjct: 593 PLPVEFLIKT 602


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PLPQQALLK 9
PLP Q +LK
Sbjct: 314 PLPFQEILK 322


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PLPQQALLK 9
PLP Q +LK
Sbjct: 314 PLPFQEILK 322




6|SequenceR|35|26|HPQHVPLPQQ

>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HPQHVP 6
HPQHVP
Sbjct: 92 HPQHVP 97


>sp|RRP41_HYPBU|EXOSOME complex component Rrp41|Hyperthermus butylicus (strain DSM 5456

Query: 1 HPQHVPLPQQ 10
HP+HV LP +
Sbjct: 71 HPRHVALPDR 80


>sp|RRP41_SACS2|EXOSOME complex component Rrp41|Saccharolobus solfataricus (strain ATCC

Query: 1 HPQHVPLPQQ 10
HP+H+ LP +
Sbjct: 65 HPRHLSLPDR 74


>sp|RRP41_PYRIL|EXOSOME complex component Rrp41|Pyrobaculum islandicum (strain DSM 4184

Query: 1 HPQHVPLPQQ 10
HP+H+ LP +
Sbjct: 60 HPRHLSLPDR 69


>sp|RRP41_PYRNV|EXOSOME complex component Rrp41|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 HPQHVPLPQQ 10
HP+H+ LP +
Sbjct: 60 HPRHLSLPDR 69


>sp|RRP41_SULAC|EXOSOME complex component Rrp41|Sulfolobus acidocaldarius (strain ATCC

Query: 1 HPQHVPLPQQ 10
HP+H+ LP +
Sbjct: 62 HPRHLALPDK 71


>sp|RRP41_PYRAE|EXOSOME complex component Rrp41|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HPQHVPLPQQ 10
HP+H+ LP +
Sbjct: 60 HPRHLSLPDR 69


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PQHVPLPQ 9
P HVPL Q
Sbjct: 266 PGHVPLDQ 273


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PQHVPLPQ 9
P HVPL Q
Sbjct: 263 PGHVPLDQ 270


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PQHVPLPQ 9
P HVPL Q
Sbjct: 266 PGHVPLDQ 273


>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 PQHVPLPQ 9
P HVPL Q
Sbjct: 266 PGHVPLDQ 273


>sp|RRP41_PYRCJ|EXOSOME complex component Rrp41|Pyrobaculum calidifontis (strain DSM

Query: 1 HPQHVPLPQQ 10
HP+H+ LP +
Sbjct: 60 HPRHLSLPDR 69


>sp|GLPK_THEON|GLYCEROL kinase|Thermococcus onnurineus (strain NA1)

Query: 2 PQHVPLP 8
PQH P P
Sbjct: 35 PQHYPRP 41


>sp|GLPK_THEKO|GLYCEROL kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PQHVPLP 8
PQH P P
Sbjct: 35 PQHYPRP 41


>sp|GLPK_SACI7|GLYCEROL kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PQHVPLP 8
PQH P P
Sbjct: 39 PQHYPQP 45


>sp|GLPK_SACI6|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PQHVPLP 8
PQH P P
Sbjct: 39 PQHYPQP 45


>sp|GLPK_SACI4|GLYCEROL kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PQHVPLP 8
PQH P P
Sbjct: 39 PQHYPQP 45


>sp|GLPK_SACI3|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PQHVPLP 8
PQH P P
Sbjct: 39 PQHYPQP 45


>sp|GLPK_SACI2|GLYCEROL kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PQHVPLP 8
PQH P P
Sbjct: 39 PQHYPQP 45


>sp|RRP41_PYRAR|EXOSOME complex component Rrp41|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 HPQHVPLPQQ 10
HP+H+ LP +
Sbjct: 60 HPRHLSLPDR 69


>sp|GLPK_THEGJ|GLYCEROL kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PQHVPLP 8
PQH P P
Sbjct: 35 PQHYPKP 41


>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PQHVPLP 8
PQH P P
Sbjct: 36 PQHYPSP 42


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 PQHVPLPQ 9
PQ PLP+
Sbjct: 525 PQESPLPE 532


>sp|RTCA_METBF|RNA 3'-terminal phosphate cyclase|Methanosarcina barkeri (strain Fusaro

Query: 2 PQHVPLPQ 9
P HVPL Q
Sbjct: 195 PAHVPLRQ 202


>sp|RRP41_SULTO|EXOSOME complex component Rrp41|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HPQHVPLPQQ 10
HP+H+ LP +
Sbjct: 62 HPRHLALPDR 71


>sp|THIC2_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PQHVPLPQ 9
P H+PL Q
Sbjct: 266 PGHIPLDQ 273


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 1 HPQHVP 6
H QHVP
Sbjct: 315 HDQHVP 320


>sp|Y1533_SACS2|PUTATIVE dioxygenase SSO1533|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HPQHVPL 7
HPQ VP+
Sbjct: 286 HPQSVPI 292


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 HPQHVPLP 8
H QH P P
Sbjct: 35 HEQHYPEP 42


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 HPQHVPLP 8
H QH P P
Sbjct: 35 HEQHYPEP 42


>sp|THIC_THEKO|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PQHVPLPQ 9
P HVP+ Q
Sbjct: 267 PGHVPIDQ 274


>sp|THIC_THEGJ|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PQHVPLPQ 9
P HVP+ Q
Sbjct: 267 PGHVPIDQ 274


>sp|THIC_PYRFU|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PQHVPLPQ 9
P HVP+ Q
Sbjct: 267 PGHVPIDQ 274


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 PQHVPLPQ 9
P HVP+ Q
Sbjct: 267 PGHVPIDQ 274


>sp|METE_PYRFU|METHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HPQHVPL 7
HP VPL
Sbjct: 185 HPSEVPL 191


>sp|METE_PYRHO|METHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HPQHVPL 7
HP VPL
Sbjct: 185 HPDEVPL 191


>sp|METE_PYRAB|METHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 HPQHVPL 7
HP VPL
Sbjct: 185 HPDEVPL 191


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PQHVPLPQ 9
P HVP+ Q
Sbjct: 266 PGHVPITQ 273


>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PQHVPLPQ 9
P+H P PQ
Sbjct: 329 PKHEPKPQ 336


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 PQHVPLPQ 9
P HVPL Q
Sbjct: 267 PGHVPLDQ 274


>sp|RL5_META3|LARGE ribosomal subunit protein uL5|Methanococcus aeolicus (strain ATCC

Query: 2 PQHVPLPQQ 10
P+H+ P Q
Sbjct: 113 PEHIDFPNQ 121


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 1 HPQHVPL 7
HPQH P+
Sbjct: 95 HPQHHPV 101


>sp|SFSA_PYRCJ|SUGAR fermentation stimulation protein homolog|Pyrobaculum

Query: 4 HVPLPQ 9
H PLPQ
Sbjct: 2 HFPLPQ 7


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PQHVPLPQ 9
P HVP+ Q
Sbjct: 261 PGHVPMDQ 268


>sp|HUTI_HALMA|IMIDAZOLONEPROPIONASE marismortui (strain ATCC 43049

Query: 2 PQHVPLPQQ 10
P HV +P Q
Sbjct: 382 PSHVHIPYQ 390




7|SequenceR|40|31|ESVLSHPQHV

>sp|RS8E_ARCFU|SMALL ribosomal subunit protein eS8|Archaeoglobus fulgidus (strain ATCC

Query: 1 ESVLSHPQHV 10
ESV+ +P HV
Sbjct: 77 ESVVENPAHV 86


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 HPQHV 10
HPQHV
Sbjct: 92 HPQHV 96


>sp|IF6_NATPD|TRANSLATION initiation factor 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ESVLSHPQ 8
+ VLSHP+
Sbjct: 152 DGVLSHPK 159


>sp|TRPC_HALVD|INDOLE-3-GLYCEROL phosphate synthase|Haloferax volcanii (strain ATCC 29605

Query: 2 SVLSHPQH 9
SVL+ P+H
Sbjct: 86 SVLTEPEH 93


>sp|RL21_METHJ|LARGE ribosomal subunit protein eL21|Methanospirillum hungatei JF-1

Query: 1 ESVLSHPQHV 10
++V+S PQH+
Sbjct: 83 KTVISRPQHL 92


>sp|AOCD_METMP|ORNITHINE cyclodeaminase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SVLSHPQHV 10
S +HP HV
Sbjct: 98 STTNHPTHV 106




8|SequenceR|45|36|KVTFGESVLS

>sp|KDGK1_HALVD|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 2 VTFGESVL 9
VTFGE++L
Sbjct: 5 VTFGETML 12


>sp|Y266_ARCFU|UNCHARACTERIZED transporter AF_0266|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TFGESVLS 10
TFG+S+LS
Sbjct: 157 TFGKSLLS 164


>sp|ARLY_METVS|ARGININOSUCCINATE lyase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VTFGESVLS 10
VTFG +LS
Sbjct: 163 VTFGHQILS 171


>sp|KDGK2_HALVD|2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 2 VTFGESVL 9
VTFGE+++
Sbjct: 6 VTFGETMI 13


>sp|ARLY_METMP|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VTFGESVLS 10
VTFG +LS
Sbjct: 163 VTFGHQILS 171


>sp|ARLY_METM5|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C5 /

Query: 2 VTFGESVLS 10
VTFG +LS
Sbjct: 163 VTFGHQILS 171


>sp|CAS7_METJA|CRISPR-ASSOCIATED protein Cas7/Cst2/DevR|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VTFGESVLS 10
V FGESV S
Sbjct: 300 VDFGESVSS 308


>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 2 VTFGESVLS 10
VTFG +LS
Sbjct: 163 VTFGHHILS 171




9|SequenceR|50|41|NKMMAKVTFG

***** No hits found ******


10|SequenceR|55|46|GRVVSNKMMA

>sp|RS17_METB6|SMALL ribosomal subunit protein uS17|Methanoregula boonei (strain DSM

Query: 1 GRVVSNKMMA 10
G+VVS+KMM
Sbjct: 36 GKVVSDKMMG 45


>sp|RS17_METHJ|SMALL ribosomal subunit protein uS17|Methanospirillum hungatei JF-1

Query: 1 GRVVSNKM 8
G+VVS+KM
Sbjct: 36 GKVVSDKM 43


>sp|ILVE_METJA|PUTATIVE branched-chain-amino-acid aminotransferase|Methanocaldococcus

Query: 1 GRVVSNKMMA 10
GRV++NK +
Sbjct: 255 GRVINNKQVG 264


>sp|PSB_HALSA|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 1 GRVVSNK 7
GRV+SNK
Sbjct: 72 GRVISNK 78


>sp|PSB_HALS3|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 29341

Query: 1 GRVVSNK 7
GRV+SNK
Sbjct: 72 GRVISNK 78


>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 1 GRVVSNKM 8
GR++ NK+
Sbjct: 287 GRIIKNKL 294


>sp|NTPTH_SULAC|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GRVVSNK 7
GRV SNK
Sbjct: 163 GRVTSNK 169




11|SequenceR|60|51|GAAPPGRVVS

>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GAAPPGRVVS 10
GA P G+VVS
Sbjct: 141 GAVPCGKVVS 150


>sp|NASB_HALMT|PROBABLE nitrate transporter|Haloferax mediterranei (strain ATCC 33500

Query: 2 AAPPGRVVS 10
+APPGR+++
Sbjct: 57 SAPPGRILT 65


>sp|DNAG_NANEQ|DNA primase DnaG|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 APPGRVV 9
APPGR V
Sbjct: 246 APPGREV 252


>sp|HDRC1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C1|Methanococcus

Query: 1 GAAPPGRVVS 10
GA P GR+ +
Sbjct: 42 GACPSGRITA 51


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PPGRVVS 10
PPG +VS
Sbjct: 178 PPGTIVS 184


>sp|MFNB_METM5|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 2 AAPPGRVVS 10
A P GR+VS
Sbjct: 48 ATPEGRLVS 56


>sp|SUCC_PYRAR|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum arsenaticum (strain

Query: 4 PPGRVVS 10
PPGRV +
Sbjct: 20 PPGRVAT 26


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GAAPPGRVV 9
GA+P GR +
Sbjct: 320 GASPVGRTI 328




12|SequenceR|65|56|REKFAGAAPP

>sp|UREG_HALMA|UREASE accessory protein UreG|Haloarcula marismortui (strain ATCC 43049

Query: 1 REKFAGAAP 9
RE+FAG P
Sbjct: 56 RERFAGVVP 64


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 REKFAGAAPP 10
+E FA APP
Sbjct: 99 KESFAIIAPP 108


>sp|UREG_NATPD|UREASE accessory protein UreG|Natronomonas pharaonis (strain ATCC 35678

Query: 1 REKFAGAAPP 10
RE F G PP
Sbjct: 54 RESFEGILPP 63




13|SequenceR|70|61|TPKTPREKFA

>sp|Y1382_METJA|UPF0310 protein MJ1382|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TPKTPREKF 9
TP+ P EKF
Sbjct: 79 TPRNPNEKF 87


>sp|COBS_METKA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 PKTPRE 7
PK+PRE
Sbjct: 22 PKSPRE 27


>sp|Y3536_METJA|UPF0310 protein MJECL36|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TPKTPREKF 9
TP+ P EKF
Sbjct: 79 TPRNPNEKF 87


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PKTPREKF 9
PK P+E F
Sbjct: 549 PKNPKEAF 556


>sp|TRPG_METJA|ANTHRANILATE synthase component 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PKTPRE 7
PKTP+E
Sbjct: 56 PKTPKE 61


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TPKTPREKF 9
T KTP EKF
Sbjct: 331 TEKTPGEKF 339


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 TPKTPREKF 9
T KTP EKF
Sbjct: 331 TEKTPGEKF 339


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TPKTPREKF 9
T KTP EKF
Sbjct: 331 TEKTPGEKF 339


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 TPKTPREKF 9
T KTP EKF
Sbjct: 331 TEKTPGEKF 339


>sp|COMD_METJA|SULFOPYRUVATE decarboxylase subunit alpha|Methanocaldococcus jannaschii (strain

Query: 2 PKTPREKF 9
PKTP E +
Sbjct: 130 PKTPEEAY 137


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TPKTPREKF 9
T KTP EKF
Sbjct: 331 TEKTPGEKF 339


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 TPKTPREKF 9
T KTP EKF
Sbjct: 331 TEKTPGEKF 339


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 TPKTPREKF 9
T KTP EKF
Sbjct: 331 TEKTPGEKF 339


>sp|RL3_METTH|LARGE ribosomal subunit protein uL3|Methanothermobacter

Query: 3 KTPREKF 9
KTP EKF
Sbjct: 167 KTPEEKF 173




14|SequenceR|75|66|FKRFATPKTP

>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 1 FKRFATPKTP 10
+RFA KTP
Sbjct: 48 LRRFAVEKTP 57


>sp|SYS_METHJ|SERINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KRFATPKT 9
KR+ TP+T
Sbjct: 127 KRYGTPRT 134


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 FKRFATPKT 9
F+R A PKT
Sbjct: 556 FERLADPKT 564


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 1 FKRFATPKT 9
FK F PKT
Sbjct: 124 FKEFGMPKT 132


>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 2 KRFATPKTP 10
K+F PK P
Sbjct: 398 KKFVRPKNP 406


>sp|RS4_METHJ|SMALL ribosomal subunit protein uS4|Methanospirillum hungatei JF-1

Query: 2 KRFATPKTP 10
K++ TPK P
Sbjct: 9 KQYQTPKRP 17


>sp|EF1A_METAC|ELONGATION factor 1-alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KRFATPK 8
KRF TPK
Sbjct: 78 KRFDTPK 84


>sp|EF1A_METB6|ELONGATION factor 1-alpha|Methanoregula boonei (strain DSM 21154

Query: 2 KRFATPK 8
KRF TPK
Sbjct: 78 KRFDTPK 84




15|SequenceR|80|71|DGREYFKRFA

>sp|DPHB_METLZ|DIPHTHINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 REYFKRFA 10
REY +RFA
Sbjct: 242 REYLERFA 249


>sp|DPHB_METB6|DIPHTHINE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 REYFKRFA 10
REY RFA
Sbjct: 240 REYLARFA 247


>sp|RLMN_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 2 GREYFKR 8
GR+YFK+
Sbjct: 252 GRDYFKK 258


>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGREYFKRFA 10
D RE+F RFA
Sbjct: 277 DKREFFLRFA 286


>sp|Y163_METJA|UNCHARACTERIZED protein MJ0163|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGREYFKRF 9
+GREY K F
Sbjct: 55 EGREYTKEF 63


>sp|AATC_METJA|A-TYPE ATP synthase subunit C|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DGREYFK 7
DG EYFK
Sbjct: 200 DGTEYFK 206


>sp|BPS2_ACIAM|PROTEIN bps2|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 DGREYFKR 8
DGR Y++R
Sbjct: 69 DGRTYYRR 76


>sp|HIS8_METAC|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DGREYFKR 8
+GREY K+
Sbjct: 285 EGREYLKK 292


>sp|GUAAA_THEVO|GMP synthase [glutamine-hydrolyzing] subunit A|Thermoplasma volcanium

Query: 2 GREYFKRF 9
GRE FK F
Sbjct: 177 GREIFKNF 184


>sp|NFI_SULAC|ENDONUCLEASE V|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DGREYFKRF 9
DG++YF ++
Sbjct: 53 DGKDYFHKY 61


>sp|METK_THEGJ|S-ADENOSYLMETHIONINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 REYFKRFA 10
REY KR+
Sbjct: 51 REYLKRYG 58


>sp|TF2B1_HALSA|TRANSCRIPTION initiation factor IIB 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 DGREYFKRFA 10
D REY R+A
Sbjct: 202 DPREYLPRYA 211


>sp|METK_PYRAB|S-ADENOSYLMETHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 REYFKRFA 10
REY KR+
Sbjct: 48 REYMKRYG 55


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DGREYFKR 8
DG+EY+ R
Sbjct: 306 DGKEYWPR 313


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 3 REYFKRFA 10
REYFK F
Sbjct: 130 REYFKEFG 137


>sp|METK_THEON|S-ADENOSYLMETHIONINE synthase|Thermococcus onnurineus (strain NA1)

Query: 3 REYFKRFA 10
REY KR+
Sbjct: 51 REYIKRYG 58


>sp|GAL1_PYRHO|GALACTOKINASE horikoshii (strain ATCC 700860

Query: 3 REYFKRF 9
REY KRF
Sbjct: 327 REYLKRF 333


>sp|AMPD_METJA|ANHYDROMEVALONATE phosphate decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GREYFKR 8
GRE+F+R
Sbjct: 409 GREHFER 415


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 1 DGREYFKR 8
DG+EY+ R
Sbjct: 325 DGKEYWPR 332


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 1 DGREYFKRF 9
D EY KRF
Sbjct: 520 DKAEYLKRF 528


>sp|TF2B3_HALSA|TRANSCRIPTION initiation factor IIB 3|Halobacterium salinarum (strain ATCC 700922

Query: 1 DGREYFKRFA 10
D +EY RFA
Sbjct: 227 DPKEYLPRFA 236


>sp|TRPC_METTM|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 2 GREYFKRFA 10
G E+F++FA
Sbjct: 266 GDEFFEQFA 274


>sp|METK_ARCFU|S-ADENOSYLMETHIONINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 REYFKRFA 10
REY +RF
Sbjct: 47 REYIRRFG 54


>sp|HIS8_METMA|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DGREYFK 7
+GREY K
Sbjct: 286 EGREYLK 292


>sp|TRPC_METTH|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 2 GREYFKRFA 10
G E+F++FA
Sbjct: 264 GDEFFEQFA 272


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DGREYFKRFA 10
DGR Y K +
Sbjct: 215 DGRNYIKEIS 224


>sp|RL13_METKA|LARGE ribosomal subunit protein uL13|Methanopyrus kandleri (strain AV19 /

Query: 2 GREYFKRF 9
GRE FKR
Sbjct: 101 GREAFKRL 108


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 3 REYFKRF 9
+EYFKR
Sbjct: 31 KEYFKRL 37


>sp|CREN7_PYRAE|CHROMATIN protein Cren7|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DGREYFKR 8
+GR+YF R
Sbjct: 15 EGRKYFLR 22


>sp|Y424_METJA|UNCHARACTERIZED protein MJ0424|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GREYFK 7
G+EYFK
Sbjct: 23 GKEYFK 28


>sp|RL13_METJA|LARGE ribosomal subunit protein uL13|Methanocaldococcus jannaschii

Query: 2 GREYFKR 8
GRE FKR
Sbjct: 91 GREAFKR 97




16|SequenceR|85|76|LAIPFDGREY

>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LAIPFDGRE 9
L +PFDG E
Sbjct: 99 LGVPFDGEE 107


>sp|COFC_HALUD|2-PHOSPHO-L-LACTATE guanylyltransferase|Halorhabdus utahensis (strain DSM 12940

Query: 1 LAIPFDGRE 9
+ +PFDGR+
Sbjct: 3 VVVPFDGRD 11


>sp|CSG_METTL|S-LAYER protein|Methanothermococcus thermolithotrophicus

Query: 1 LAIPFDGREY 10
+ IPF G EY
Sbjct: 231 MRIPFLGEEY 240


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 LAIPFDGRE 9
L + FDGRE
Sbjct: 391 LDVDFDGRE 399


>sp|WTPA_THEKO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LAIPFDGRE 9
L+IPF G E
Sbjct: 46 LSIPFQGLE 54


>sp|APAUH_THEKO|N(1)-AMINOPROPYLAGMATINE ureohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LAIPFDG 7
L +PFDG
Sbjct: 27 LGVPFDG 33


>sp|TBP_THEVO|TATA-BOX-BINDING protein|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LAIPFDGREY 10
+A+ DG EY
Sbjct: 27 IALALDGSEY 36


>sp|TBP_THEAC|TATA-BOX-BINDING protein|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LAIPFDGREY 10
+A+ DG EY
Sbjct: 27 IALALDGSEY 36


>sp|NFI_SULAC|ENDONUCLEASE V|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LAIPFDGREY 10
+++ FDG++Y
Sbjct: 48 VSVMFDGKDY 57


>sp|CAS2_THEPD|CRISPR-ASSOCIATED endoribonuclease Cas2|Thermofilum pendens (strain DSM 2475

Query: 5 FDGREY 10
FDGR+Y
Sbjct: 77 FDGRDY 82


>sp|RIBA_THEVO|GTP cyclohydrolase-2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LAIPFDGREY 10
L +P D R Y
Sbjct: 119 LGLPVDSRNY 128


>sp|AGMT_PYRHO|AGMATINASE horikoshii (strain ATCC 700860

Query: 1 LAIPFDG 7
L +PFDG
Sbjct: 26 LGLPFDG 32


>sp|Y1470_META3|UNCHARACTERIZED solute-binding protein Maeo_1470|Methanococcus aeolicus (strain

Query: 1 LAIPFDGRE 9
LA+ F GRE
Sbjct: 16 LAVMFGGRE 24


>sp|FLPA_METKA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanopyrus kandleri (strain

Query: 3 IPFDGREY 10
+ +DG+EY
Sbjct: 44 VEYDGKEY 51




17|SequenceR|90|81|KSDHELAIPF

>sp|DTDA_CENSY|D-AMINOACYL-TRNA deacylase|Cenarchaeum symbiosum (strain A)

Query: 2 SDHELAIPF 10
SD E+AIP+
Sbjct: 91 SDREVAIPY 99


>sp|RL22_NANEQ|LARGE ribosomal subunit protein uL22|Nanoarchaeum equitans (strain

Query: 3 DHELAIPF 10
D ELA+PF
Sbjct: 49 DKELAVPF 56


>sp|MTNA_SULAC|PUTATIVE methylthioribose-1-phosphate isomerase|Sulfolobus acidocaldarius

Query: 4 HELAIPF 10
HEL IPF
Sbjct: 281 HELGIPF 287


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 2 SDHELAIPF 10
SDH L IP+
Sbjct: 460 SDHYLEIPY 468


>sp|PANE_HALSA|2-DEHYDROPANTOATE 2-reductase|Halobacterium salinarum (strain ATCC 700922

Query: 3 DHELAIP 9
DH++A+P
Sbjct: 281 DHDIAVP 287


>sp|HTR9_HALSA|HALOBACTERIAL transducer protein 9|Halobacterium salinarum (strain ATCC 700922

Query: 1 KSDHELAIPF 10
K+ HEL PF
Sbjct: 3 KNKHELGSPF 12


>sp|NADE_THEVO|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KSDHELAIPF 10
KSDH+ +P+
Sbjct: 228 KSDHKRRLPY 237


>sp|QUEC_METTH|7-CYANO-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KSDHELAIPF 10
++ HE+ +PF
Sbjct: 173 EAGHEVGLPF 182


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 SDHELAIPF 10
++H L IPF
Sbjct: 170 AEHTLPIPF 178


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SDHELAIPF 10
++H L +PF
Sbjct: 170 AEHTLTVPF 178


>sp|GUAAB_METTH|GMP synthase [glutamine-hydrolyzing] subunit B|Methanothermobacter

Query: 1 KSDHELAIP 9
KS H +A+P
Sbjct: 140 KSHHNVALP 148




18|SequenceR|95|86|AIKNGKSDHE

>sp|MOAA_THEKO|PROBABLE GTP 3',8-cyclase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AIKNGKSDHE 10
A++NG SD E
Sbjct: 281 AMRNGASDEE 290


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 2 IKNGKSDHE 10
+KNG + HE
Sbjct: 402 VKNGTTSHE 410


>sp|HIS2_METPE|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 AIKNGKSD 8
A+KNG+SD
Sbjct: 54 AVKNGESD 61


>sp|PURP_PYRAE|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum aerophilum (strain ATCC

Query: 1 AIKNGKSDH 9
A+K GK +H
Sbjct: 330 AVKRGKIEH 338


>sp|Y436_PYRFU|KELCH domain-containing protein PF0436|Pyrococcus furiosus (strain ATCC

Query: 2 IKNGKSD 8
+KNGKS+
Sbjct: 85 LKNGKSE 91


>sp|RIFK_CALMQ|RIBOFLAVIN kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 IKNGKSDHE 10
++NG +DH+
Sbjct: 23 LQNGVNDHD 31


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AIKNGKSD 8
A+K+GKS+
Sbjct: 246 AVKDGKSE 253


>sp|VHUB_METVO|POLYFERREDOXIN protein VhuB|Methanococcus voltae

Query: 1 AIKNGKSDHE 10
A+K GK HE
Sbjct: 325 ALKMGKITHE 334




19|SequenceR|100|91|IEVKWAIKNG

>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 3 VKWAIKNG 10
VKWAIK G
Sbjct: 176 VKWAIKQG 183


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 3 VKWAIKNG 10
VKWAIK G
Sbjct: 176 VKWAIKQG 183


>sp|Y1241_METJA|UNCHARACTERIZED protein MJ1241|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IEVKWAIKNG 10
+E+KW +K G
Sbjct: 5 MEIKWYVKRG 14


>sp|Y130_ARCFU|PROBABLE deacetylase AF_0130|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IEVKWAIKNG 10
I VKW +K G
Sbjct: 143 IMVKWLLKQG 152


>sp|Y091_METJA|UNCHARACTERIZED membrane protein MJ0091|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IEVKWAIKNG 10
I ++W +KNG
Sbjct: 137 IYLRWTVKNG 146


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EVKWAIKNG 10
EV+ AIKNG
Sbjct: 213 EVRIAIKNG 221


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 KWAIKNG 10
KWA+ NG
Sbjct: 155 KWAVDNG 161


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 4 KWAIKNG 10
KWA+ NG
Sbjct: 589 KWAVDNG 595


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KWAIKNG 10
+WA++NG
Sbjct: 155 RWAVENG 161


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 3 VKWAIKNG 10
++WAI+NG
Sbjct: 214 MEWAIRNG 221


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VKWAIKNG 10
V+WA+K G
Sbjct: 640 VRWAVKEG 647


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 VKWAIKNG 10
V WAI NG
Sbjct: 151 VNWAIDNG 158


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VKWAIKNG 10
V WA++NG
Sbjct: 334 VDWAVENG 341


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 KWAIKNG 10
KWA+ NG
Sbjct: 543 KWAVDNG 549


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VKWAIK 8
VKWA+K
Sbjct: 498 VKWAVK 503


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 2 EVKWAIKNG 10
++ WA+ NG
Sbjct: 411 DMAWAVPNG 419


>sp|RTCB_METTH|TRNA-SPLICING ligase RtcB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 KWAIKNG 10
+WA++NG
Sbjct: 155 EWAVENG 161


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IEVKWAIKNG 10
I+++W IKN
Sbjct: 823 IKLRWPIKNA 832


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 VKWAIKN 9
VK+AIKN
Sbjct: 366 VKYAIKN 372


>sp|RS4E_AERPE|SMALL ribosomal subunit protein eS4|Aeropyrum pernix (strain ATCC

Query: 2 EVKWAIK 8
E KWA+K
Sbjct: 25 EYKWAVK 31


>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 EVKWAIKNG 10
E++W KNG
Sbjct: 194 ELEWHRKNG 202


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VKWAIK 8
+KWA+K
Sbjct: 499 IKWAVK 504


>sp|Y1252_METJA|UNCHARACTERIZED protein MJ1252|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EVKWAIKN 9
++KW IKN
Sbjct: 153 DIKWIIKN 160


>sp|PANB_SACS2|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 IEVKWAIKNG 10
I+VK A+KN
Sbjct: 92 IDVKSAVKNA 101


>sp|PURQ_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanopyrus kandleri (strain AV19 /

Query: 1 IEVKWAIK 8
+E+ WA+K
Sbjct: 16 LEMAWAVK 23


>sp|Y290_METJA|UNCHARACTERIZED protein MJ0290|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EVKWAIKNG 10
E+K IKNG
Sbjct: 9 EIKELIKNG 17


>sp|PURA_ARCFU|ADENYLOSUCCINATE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IEVKWAIKNG 10
+EV AI+NG
Sbjct: 158 LEVNQAIENG 167


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EVKWAIKN 9
EV+W I+N
Sbjct: 543 EVRWYIEN 550


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 5 WAIKNG 10
W IKNG
Sbjct: 210 WRIKNG 215


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 WAIKN 9
WAIKN
Sbjct: 456 WAIKN 460




20|SequenceR|105|96|YDLKEIEVKW

>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 YDLKEIEVKW 10
YD KEIE KW
Sbjct: 10 YDPKEIEPKW 19


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YDLKEIEVKW 10
Y+ KEIE+KW
Sbjct: 18 YNPKEIELKW 27


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YDLKEIEVKW 10
Y+ KE+E KW
Sbjct: 8 YNFKEVEEKW 17


>sp|KAE1_METTP|TRNA N6-adenosine threonylcarbamoyltransferase|Methanothrix

Query: 1 YDLKEIEVKW 10
Y E+EV+W
Sbjct: 314 YRTDEVEVRW 323


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YDLKEIEVKW 10
YD EIE KW
Sbjct: 6 YDPNEIEPKW 15


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YDLKEIEVKW 10
YD EIE KW
Sbjct: 6 YDPNEIEPKW 15


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 YDLKEIEVKW 10
YD EIE KW
Sbjct: 6 YDPNEIEPKW 15


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YDLKEIEVKW 10
YD EIE KW
Sbjct: 6 YDPNEIEPKW 15


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DLKEIEVKW 10
D KEIE KW
Sbjct: 6 DFKEIEKKW 14


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YDLKEIEVKW 10
Y+ KEIE KW
Sbjct: 44 YNPKEIEEKW 53


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YDLKEIEVKW 10
YD E+E KW
Sbjct: 7 YDAHEVEEKW 16


>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 2 DLKEIEVKW 10
D+ ++E KW
Sbjct: 416 DINQMETKW 424


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YDLKEIEVKW 10
Y EIE KW
Sbjct: 6 YSAHEIEAKW 15


>sp|METE_THEVO|METHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DLKEIEVKW 10
+LKEI+ KW
Sbjct: 157 ELKEIQSKW 165


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 KEIEVKW 10
KEIEV W
Sbjct: 126 KEIEVAW 132


>sp|KAE1B_METMJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YDLKEIEVKW 10
Y E+EV W
Sbjct: 314 YRADEVEVAW 323


>sp|MTAP_SACS2|S-METHYL-5'-THIOADENOSINE phosphorylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YDLKEIEVKW 10
+ LKE+ V+W
Sbjct: 77 WALKELGVRW 86


>sp|DPHB_METAR|DIPHTHINE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 YDLKEIEVK 9
YD K+I VK
Sbjct: 10 YDQKDISVK 18


>sp|Y1024_METJA|UNCHARACTERIZED protein MJ1024|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDLKEIEVKW 10
+D+KEI+V +
Sbjct: 54 FDIKEIKVGY 63


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LKEIEVKW 10
LKE+E KW
Sbjct: 226 LKELESKW 233


>sp|KAE1_IGNH4|TRNA N6-adenosine threonylcarbamoyltransferase|Ignicoccus hospitalis

Query: 1 YDLKEIEVKW 10
+ L E+EV W
Sbjct: 319 WRLDEVEVPW 328


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 KEIEVKW 10
KEIEV W
Sbjct: 127 KEIEVAW 133


>sp|METK_METJA|S-ADENOSYLMETHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDLKEIEVK 9
YD+K+IE K
Sbjct: 371 YDIKDIEPK 379


>sp|AROC_PYRAB|CHORISMATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 DLKEIEVK 9
++KE+E+K
Sbjct: 309 EMKEVEIK 316


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 2 DLKEIEVKW 10
+LKE + KW
Sbjct: 514 ELKERKAKW 522


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YDLKEIEVKW 10
Y+ E+E KW
Sbjct: 10 YNANEVEKKW 19


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YDLKEIEVKW 10
Y+ E+E KW
Sbjct: 10 YNANEVEEKW 19


>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 5 EIEVKW 10
E+EVKW
Sbjct: 572 EVEVKW 577


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DLKEIEVKW 10
LK+IE KW
Sbjct: 535 SLKQIEGKW 543


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LKEIEVKW 10
LKEI KW
Sbjct: 12 LKEIAAKW 19


>sp|TAW22_PYRAB|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 1 YDLKEIEVKW 10
Y ++E+EV W
Sbjct: 132 YRIRELEVIW 141


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YDLKEIEVKW 10
Y+ E+E KW
Sbjct: 10 YNASEVEEKW 19




21|SequenceR|110|101|PLYHHYDLKE

>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PLYHHYD 7
PLY HYD
Sbjct: 198 PLYTHYD 204


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PLYHHYD 7
PLY HYD
Sbjct: 198 PLYTHYD 204


>sp|Y136_METHJ|UPF0280 protein Mhun_0136|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LYHHYDLKE 10
L HH++L+E
Sbjct: 3 LRHHFELRE 11


>sp|PDXS_THEKO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus kodakarensis

Query: 1 PLYHHYDLKE 10
P+Y HY +E
Sbjct: 221 PIYGHYTYRE 230


>sp|PDXS_THEON|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus onnurineus (strain

Query: 1 PLYHHYDLKE 10
P+Y HY +E
Sbjct: 221 PVYGHYTYRE 230


>sp|PDXS_THEGJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus gammatolerans

Query: 1 PLYHHYDLKE 10
P+Y HY +E
Sbjct: 221 PVYGHYTYRE 230


>sp|DCDB_METVS|DCTP deaminase, dUMP-forming|Methanococcus vannielii (strain ATCC

Query: 1 PLYHHYDLK 9
PL+HH D K
Sbjct: 69 PLHHHLDEK 77


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PLYHHYD 7
PLY +YD
Sbjct: 202 PLYENYD 208


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 2 LYHHYDLKE 10
+Y H++LKE
Sbjct: 303 IYGHWELKE 311


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 2 LYHHYDLKE 10
+Y H++LKE
Sbjct: 303 IYGHWELKE 311


>sp|Y3697_METBF|UPF0280 protein Mbar_A3697|Methanosarcina barkeri (strain Fusaro /

Query: 1 PLYHHYDLKE 10
P+ H+ LKE
Sbjct: 16 PIKEHFQLKE 25


>sp|Y2648_METMA|UPF0280 protein MM_2648|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PLYHHYDLKE 10
P+ H+ LKE
Sbjct: 19 PIKEHFQLKE 28


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PLYHHYDLKE 10
PLY Y +KE
Sbjct: 272 PLYDRYTVKE 281


>sp|HOSA_PYRHO|HOMOCITRATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LYHHYDLKE 10
LY+HY +K+
Sbjct: 234 LYYHYGVKK 242


>sp|HOSA_PYRAB|HOMOCITRATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 LYHHYDLKE 10
LY+HY +K+
Sbjct: 234 LYYHYGIKK 242


>sp|GLMS_HALSA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Halobacterium salinarum (strain ATCC

Query: 3 YHHYDLKE 10
Y HY LKE
Sbjct: 244 YDHYMLKE 251


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 3 YHHYDLK 9
Y H+D+K
Sbjct: 223 YQHFDIK 229


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PLYHHYDLKE 10
PLY D+KE
Sbjct: 306 PLYRPRDIKE 315


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 1 PLYHHYDLKE 10
PLY D+KE
Sbjct: 303 PLYRPRDIKE 312


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 HYDLK 9
HYDLK
Sbjct: 204 HYDLK 208


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LYHHYDLKE 10
+Y H+++KE
Sbjct: 302 IYGHWEIKE 310


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 1 PLYHHYDLKE 10
PLY D+KE
Sbjct: 303 PLYRPKDIKE 312


>sp|PURP_CALMQ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Caldivirga maquilingensis (strain ATCC

Query: 1 PLYHHY 6
P Y+HY
Sbjct: 189 PAYYHY 194


>sp|PURP_PYRIL|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PLYHHY 6
P Y+HY
Sbjct: 185 PAYYHY 190


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LYHHYD 7
+YHH D
Sbjct: 318 IYHHLD 323


>sp|PURP_PYRAE|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum aerophilum (strain ATCC

Query: 1 PLYHHY 6
P Y+HY
Sbjct: 193 PAYYHY 198


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 PLYHHY 6
P+Y HY
Sbjct: 322 PVYRHY 327


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PLYHHY 6
P+Y HY
Sbjct: 320 PVYRHY 325


>sp|PURP_PYRAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum arsenaticum (strain DSM

Query: 1 PLYHHY 6
P Y+HY
Sbjct: 187 PAYYHY 192




22|SequenceR|115|106|GDFFLPLYHH

>sp|Y1554_METJA|UNCHARACTERIZED protein MJ1554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FFLPLYHH 10
FFLP Y+H
Sbjct: 547 FFLPAYNH 554


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GDFFLPL 7
GDF++PL
Sbjct: 99 GDFYIPL 105


>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 2 DFFLPLYHH 10
+FF+P HH
Sbjct: 175 EFFVPGKHH 183


>sp|POK_THEKO|PANTOATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FFLPLYH 9
FF+P++H
Sbjct: 14 FFVPVFH 20


>sp|HMDH_SACS2|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GDFFLPL 7
GDF++P+
Sbjct: 89 GDFYVPM 95


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DFFLPLYH 9
DFFL LY+
Sbjct: 106 DFFLDLYN 113


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DFFLPLYH 9
DF P+YH
Sbjct: 42 DFIDPMYH 49


>sp|TRPD_IGNH4|ANTHRANILATE phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 FFLPLYH 9
F PLYH
Sbjct: 150 LFAPLYH 156


>sp|TRPCD_ARCFU|TRYPTOPHAN biosynthesis protein TrpCD|Archaeoglobus fulgidus (strain ATCC

Query: 3 FFLPLYH 9
F PLYH
Sbjct: 364 LFAPLYH 370


>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GDFFLPLYH 9
G+ F+P YH
Sbjct: 263 GERFMPDYH 271


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FFLPLYHH 10
FFLP Y H
Sbjct: 125 FFLPSYRH 132


>sp|MFNA_HALMA|PROBABLE L-aspartate decarboxylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GDFFLPLYHH 10
G F+LP H
Sbjct: 179 GGFYLPFTDH 188


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 1 GDFFLPLYHH 10
GDF + YH+
Sbjct: 490 GDFLMSSYHY 499


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DFFLPLYHH 10
DF P +HH
Sbjct: 48 DFIDPGFHH 56


>sp|HMDH_PYRHO|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GDFFLPL 7
G+F++PL
Sbjct: 96 GEFYIPL 102


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 GDFFLPL 7
G+F++PL
Sbjct: 91 GEFYIPL 97


>sp|HMDH_METJA|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDFFLPL 7
G+F++PL
Sbjct: 90 GEFYIPL 96


>sp|CAS4_SACS2|CRISPR-ASSOCIATED exonuclease Cas4|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 LPLYHH 10
LPL HH
Sbjct: 123 LPLIHH 128


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 LPLYH 9
LPLYH
Sbjct: 263 LPLYH 267


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 LPLYH 9
LPLYH
Sbjct: 263 LPLYH 267


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 5 LPLYH 9
LPLYH
Sbjct: 263 LPLYH 267


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 5 LPLYH 9
LPLYH
Sbjct: 263 LPLYH 267




23|SequenceR|120|111|TMECLGDFFL

>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 TMECLGDFF 9
+ME L DFF
Sbjct: 268 SMETLADFF 276


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 2 MECLGD 7
+ECLGD
Sbjct: 345 LECLGD 350


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 2 MECLGD 7
+ECLGD
Sbjct: 345 LECLGD 350


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 2 MECLGD 7
+ECLGD
Sbjct: 345 LECLGD 350


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 2 MECLGD 7
+ECLGD
Sbjct: 345 LECLGD 350


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 2 MECLGD 7
+ECLGD
Sbjct: 345 LECLGD 350


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 2 MECLGD 7
+ECLGD
Sbjct: 345 LECLGD 350


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 2 MECLGD 7
+ECLGD
Sbjct: 345 LECLGD 350


>sp|Y2121_ARCFU|UNCHARACTERIZED protein AF_2121|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MECLGDFFL 10
+ LGDFF+
Sbjct: 19 LRALGDFFI 27


>sp|PCNA_METST|DNA polymerase sliding clamp|Methanosphaera stadtmanae (strain ATCC

Query: 1 TMECLGDF 8
T+E +GDF
Sbjct: 163 TLEAVGDF 170


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 3 ECLGD 7
ECLGD
Sbjct: 284 ECLGD 288


>sp|DPCKG_THEPD|GTP-DEPENDENT dephospho-CoA kinase|Thermofilum pendens (strain DSM 2475

Query: 5 LGDFFL 10
LGDFF+
Sbjct: 59 LGDFFI 64




24|SequenceR|125|116|FEYPFTMECL

>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM

Query: 2 EYPFTMECL 10
+YPFT E L
Sbjct: 8 KYPFTQEAL 16


>sp|TRM56_AERPE|TRNA (cytidine(56)-2'-O)-methyltransferase|Aeropyrum pernix (strain

Query: 4 PFTMEC 9
PFT+EC
Sbjct: 65 PFTVEC 70


>sp|SPSS_METMP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 YPFTMEC 9
YPF + C
Sbjct: 187 YPFLLNC 193


>sp|SPSS_METM7|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C7 /

Query: 3 YPFTMEC 9
YPF + C
Sbjct: 187 YPFLLNC 193


>sp|SPSS_METM6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C6 /

Query: 3 YPFTMEC 9
YPF + C
Sbjct: 187 YPFLLNC 193


>sp|SPSS_META3|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 YPFTMEC 9
YPF + C
Sbjct: 190 YPFLLNC 196


>sp|SPSS_METM5|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C5 /

Query: 3 YPFTMEC 9
YPF + C
Sbjct: 187 YPFLLNC 193


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EYPFTMECL 10
+Y FT EC+
Sbjct: 101 KYGFTEECV 109


>sp|HYD1D_PYRFU|SULFHYDROGENASE 1 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EYPFTMEC 9
+YP +EC
Sbjct: 160 DYPVCLEC 167




25|SequenceR|130|121|GQRAFFEYPF

>sp|PIMT_PYRFU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QRAFFEYP 9
+RAF +YP
Sbjct: 30 ERAFLKYP 37


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 3 RAFFEYP 9
R FEYP
Sbjct: 291 RVLFEYP 297


>sp|MPTD_PICTO|DIHYDRONEOPTERIN aldolase|Picrophilus torridus (strain ATCC 700027

Query: 2 QRAFFE 7
QRAFFE
Sbjct: 15 QRAFFE 20


>sp|GSA_METS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 RAFFEYPF 10
RAF YPF
Sbjct: 23 RAFEPYPF 30


>sp|AAT_SULTO|ASPARTATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QRAFFEYPF 10
Q AF+ +PF
Sbjct: 321 QGAFYMFPF 329


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus fulgidus

Query: 4 AFFEYP 9
+FFEYP
Sbjct: 292 SFFEYP 297




26|SequenceR|135|126|LMDHIGQRAF

>sp|RL15_PYRAB|LARGE ribosomal subunit protein uL15|Pyrococcus abyssi (strain GE5 /

Query: 3 DHIGQRAF 10
DH+G+R F
Sbjct: 56 DHLGKRGF 63


>sp|RL15_PYRFU|LARGE ribosomal subunit protein uL15|Pyrococcus furiosus (strain ATCC

Query: 3 DHIGQRAF 10
DH+G+R F
Sbjct: 56 DHLGKRGF 63


>sp|RL15_PYRHO|LARGE ribosomal subunit protein uL15|Pyrococcus horikoshii (strain ATCC

Query: 3 DHIGQRAF 10
DH+G+R F
Sbjct: 56 DHLGKRGF 63


>sp|RL15_METKA|LARGE ribosomal subunit protein uL15|Methanopyrus kandleri (strain AV19

Query: 3 DHIGQRAF 10
DH G+R F
Sbjct: 55 DHFGKRGF 62


>sp|HEM1_METMP|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain DSM 14266

Query: 4 HIGQRA 9
H+GQRA
Sbjct: 123 HVGQRA 128


>sp|HEM1_METM7|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C7 /

Query: 4 HIGQRA 9
H+GQRA
Sbjct: 123 HVGQRA 128


>sp|HEM1_METM6|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C6 /

Query: 4 HIGQRA 9
H+GQRA
Sbjct: 123 HVGQRA 128


>sp|HEM1_METM5|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C5 /

Query: 4 HIGQRA 9
H+GQRA
Sbjct: 123 HVGQRA 128


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LMDHIGQRAF 10
LMD GQR F
Sbjct: 299 LMDISGQRIF 308


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 2 MDHIGQR 8
+DH+G+R
Sbjct: 186 LDHVGKR 192


>sp|RFCS_METLZ|REPLICATION factor C small subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 LMDHIGQRAF 10
L+DH+G+ F
Sbjct: 287 LIDHLGEADF 296


>sp|IDI2_METBF|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 2 MDHIGQRAF 10
++++GQR F
Sbjct: 345 LEYLGQRGF 353


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 LMDHIGQRAF 10
L+D+IG+ F
Sbjct: 289 LLDYIGETEF 298


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 3 DHIGQR 8
DH+GQ+
Sbjct: 592 DHVGQK 597




27|SequenceR|140|131|NGGHELMDHI

>sp|PYRH_PYRNV|URIDYLATE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GGHELMD 8
GG+ELMD
Sbjct: 171 GGYELMD 177


>sp|PYRH_PYRIL|URIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GGHELMD 8
GG+ELMD
Sbjct: 171 GGYELMD 177


>sp|PYRH_PYRAE|URIDYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GGHELMD 8
GG+ELMD
Sbjct: 171 GGYELMD 177


>sp|THIM_METMA|HYDROXYETHYLTHIAZOLE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GHELMDHI 10
GHELM I
Sbjct: 180 GHELMGSI 187


>sp|THIM_METBF|HYDROXYETHYLTHIAZOLE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GHELMDHI 10
GHELM I
Sbjct: 180 GHELMGSI 187


>sp|Y830_PYRAE|PROTEIN PAE0830|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GHELMDHI 10
GH+L+ H+
Sbjct: 3 GHDLVSHV 10


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 HELMDHI 10
HEL+ HI
Sbjct: 70 HELISHI 76


>sp|PYRH_CENSY|URIDYLATE kinase|Cenarchaeum symbiosum (strain A)

Query: 2 GGHELMD 8
GG++LMD
Sbjct: 180 GGYDLMD 186


>sp|PYRH_PYRAR|URIDYLATE kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GGHELMD 8
GG+EL+D
Sbjct: 171 GGYELID 177


>sp|ARLY_METM5|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C5 /

Query: 3 GHELMDHI 10
GH+++ HI
Sbjct: 166 GHQILSHI 173


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GGHELMD 8
G H+LMD
Sbjct: 194 GDHDLMD 200


>sp|THIM_METAC|HYDROXYETHYLTHIAZOLE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GHELMDHI 10
GHELM I
Sbjct: 180 GHELMGSI 187


>sp|G1PDH_THEAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma acidophilum (strain ATCC

Query: 3 GHELMDHI 10
GH++++HI
Sbjct: 18 GHDVLEHI 25


>sp|PYRH_PYRCJ|URIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GGHELMD 8
GG+EL+D
Sbjct: 171 GGYELVD 177


>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 3 GHELMDHI 10
GH++++H+
Sbjct: 325 GHQILNHL 332


>sp|ARLY_METVS|ARGININOSUCCINATE lyase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GHELMDHI 10
GH+++ H+
Sbjct: 166 GHQILSHV 173


>sp|HEM1_CENSY|GLUTAMYL-TRNA reductase|Cenarchaeum symbiosum (strain A)

Query: 1 NGGHELMDHI 10
+GG E+++H+
Sbjct: 89 SGGGEVLEHL 98


>sp|ARLY_METMP|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GHELMDHI 10
GH+++ H+
Sbjct: 166 GHQILSHV 173




28|SequenceR|145|136|VPLIKNGGHE

>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 VPLIKNG 7
VPLIKNG
Sbjct: 500 VPLIKNG 506


>sp|RLME_PICTO|RIBOSOMAL RNA large subunit methyltransferase|Picrophilus torridus (strain

Query: 1 VPLIKNGGH 9
+P +KNGG+
Sbjct: 138 IPRLKNGGN 146


>sp|KUP_METAC|PROBABLE potassium transport system protein|Methanosarcina acetivorans

Query: 1 VPLIKNG 7
VPLIK+G
Sbjct: 85 VPLIKSG 91


>sp|TIAS_CENSY|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Cenarchaeum symbiosum (strain

Query: 2 PLIKNGGH 9
P+++ GGH
Sbjct: 285 PVVREGGH 292


>sp|RRP41_PYRAE|EXOSOME complex component Rrp41|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VPLIKNG 7
VPL++NG
Sbjct: 6 VPLLQNG 12


>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein MJ0993|Methanocaldococcus

Query: 2 PLIKNGG 8
P++KNGG
Sbjct: 275 PVVKNGG 281


>sp|RRP41_PYRCJ|EXOSOME complex component Rrp41|Pyrobaculum calidifontis (strain DSM

Query: 1 VPLIKNG 7
VPL++NG
Sbjct: 6 VPLLQNG 12


>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 3 LIKNGGH 9
L+K GGH
Sbjct: 124 LVKGGGH 130


>sp|RRP41_PYRAR|EXOSOME complex component Rrp41|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VPLIKNG 7
VPL++NG
Sbjct: 6 VPLLQNG 12


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 5 KNGGHE 10
KNGGH+
Sbjct: 547 KNGGHK 552


>sp|RPIA_HALLT|RIBOSE-5-PHOSPHATE isomerase A|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PLIKNGG 8
PLIK GG
Sbjct: 108 PLIKGGG 114


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 1 VPLIKNGGHE 10
+ LIKN G E
Sbjct: 526 IDLIKNSGFE 535


>sp|CBIT_THEVO|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 4 IKNGGH 9
++NGGH
Sbjct: 42 VRNGGH 47


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LIKNGGHE 10
LI+NGG++
Sbjct: 458 LIENGGYD 465


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 VPLIKNG 7
+PL++NG
Sbjct: 466 IPLVENG 472


>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VPLIKN 6
VPLIKN
Sbjct: 512 VPLIKN 517


>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 LIKNGGH 9
L+KNGG+
Sbjct: 411 LLKNGGY 417


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 LIKNGGH 9
L+KNG H
Sbjct: 369 LLKNGDH 375


>sp|Y1403_ARCFU|UNCHARACTERIZED protein AF_1403|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LIKNGGHE 10
LIK+G HE
Sbjct: 37 LIKHGEHE 44


>sp|MBHLB_PYRFU|MEMBRANE-BOUND hydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LIKNGGH 9
++KN GH
Sbjct: 158 MVKNAGH 164




29|SequenceR|150|141|ILQPLVPLIK

>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ILQPLVPLI 9
IL P +P+I
Sbjct: 408 ILSPYIPMI 416


>sp|RPO3_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Picrophilus torridus (strain ATCC

Query: 2 LQPLVPLIK 10
+ P++P++K
Sbjct: 130 VDPMIPIVK 138


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILQPLVPLIK 10
+L P P+IK
Sbjct: 786 VLSPYAPVIK 795


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LQPLVPLI 9
L P+VPLI
Sbjct: 205 LPPVVPLI 212


>sp|PYRK_METKA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanopyrus kandleri

Query: 4 PLVPLIK 10
PLVPL++
Sbjct: 113 PLVPLVE 119




30|SequenceR|155|146|NKIPIILQPL

>sp|THIM_METB6|HYDROXYETHYLTHIAZOLE kinase|Methanoregula boonei (strain DSM 21154

Query: 2 KIPIILQPL 10
KIPIIL P+
Sbjct: 88 KIPIILDPV 96


>sp|Y513_METJA|UNCHARACTERIZED protein MJ0513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKIPIILQP 9
N IP+I+QP
Sbjct: 194 NDIPVIVQP 202


>sp|THIM_CALMQ|HYDROXYETHYLTHIAZOLE kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 NKIPIILQPL 10
N +PI+L P+
Sbjct: 88 NNVPILLDPV 97


>sp|THIM_METHJ|HYDROXYETHYLTHIAZOLE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 IPIILQPL 10
IPIIL P+
Sbjct: 98 IPIILDPV 105


>sp|THIM_METAR|HYDROXYETHYLTHIAZOLE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 IPIILQPL 10
IPIIL P+
Sbjct: 89 IPIILDPV 96


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 3 IPIILQP 9
IP+++QP
Sbjct: 636 IPVVVQP 642


>sp|THIM_METLZ|HYDROXYETHYLTHIAZOLE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 IPIILQPL 10
IPI+L P+
Sbjct: 87 IPIVLDPV 94


>sp|END4_NITMS|PROBABLE endonuclease 4|Nitrosopumilus maritimus (strain SCM1)

Query: 2 KIPIILQ 8
KIPIIL+
Sbjct: 253 KIPIILE 259


>sp|Y557_PICTO|PUTATIVE HTH-type transcriptional regulatory protein|Picrophilus torridus

Query: 1 NKIPIILQ 8
N IP+I+Q
Sbjct: 264 NNIPLIIQ 271


>sp|THIM_METPE|HYDROXYETHYLTHIAZOLE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 KIPIILQPL 10
++P+IL P+
Sbjct: 87 EVPVILDPV 95


>sp|GGGPS_CALMQ|GERANYLGERANYLGLYCERYL phosphate synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 KIPIILQP 9
K+PIIL P
Sbjct: 72 KLPIILFP 79




31|SequenceR|160|151|RLNLANKIPI

>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain ATCC

Query: 1 RLNLANKIP 9
RLN+A+K+P
Sbjct: 294 RLNVADKMP 302


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 1 RLNLANKIP 9
RLN+A+K+P
Sbjct: 294 RLNVADKMP 302


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 1 RLNLANKIP 9
RLN+A+K+P
Sbjct: 294 RLNVADKMP 302


>sp|Y367_PYRAB|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus abyssi

Query: 1 RLNLANKIPI 10
R+ + NK+PI
Sbjct: 280 RIEVVNKVPI 289


>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 1 RLNLANKIP 9
RLN+ +K+P
Sbjct: 295 RLNVCDKMP 303


>sp|MDH_SULTO|MALATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LNLANKIP 9
++LANK+P
Sbjct: 100 MDLANKLP 107


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LNLANKIPI 10
L ANKIP+
Sbjct: 364 LRYANKIPL 372


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 2 LNLANKIPI 10
L ANKIP+
Sbjct: 399 LRYANKIPL 407


>sp|Y738_METJA|UNCHARACTERIZED protein MJ0738|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LNLANKIPI 10
+ LANK PI
Sbjct: 80 MKLANKCPI 88


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 2 LNLANKIPI 10
L ANKIP+
Sbjct: 371 LRYANKIPL 379


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LNLANKIPI 10
L ANKIP+
Sbjct: 366 LRYANKIPL 374


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 LANKIPI 10
LAN++PI
Sbjct: 240 LANRVPI 246




32|SequenceR|165|156|IVQRNRLNLA

>sp|KTHY_METMJ|PROBABLE thymidylate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VQRNRLNLA 10
VQ N LNLA
Sbjct: 157 VQENYLNLA 165


>sp|PURP_METS5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Metallosphaera sedula (strain ATCC

Query: 2 VQRNRLN 8
+Q+NRLN
Sbjct: 322 IQKNRLN 328




33|SequenceR|170|161|KLTVCIVQRN

>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain ATCC

Query: 1 KLTVCIVQ 8
KLT C++Q
Sbjct: 536 KLTTCVIQ 543




34|SequenceR|175|166|LHQLVKLTVC

>sp|PYRC_METST|DIHYDROOROTASE stadtmanae (strain ATCC 43021

Query: 1 LHQLVKLT 8
L QLVKLT
Sbjct: 339 LEQLVKLT 346




35|SequenceR|180|171|EASVVLHQLV

***** No hits found ******


36|SequenceR|185|176|AKGVMEASVV

>sp|PDXT_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Metallosphaera sedula (strain

Query: 3 GVMEASVV 10
GVM+ASV+
Sbjct: 106 GVMDASVI 113




37|SequenceR|190|181|YYPVLAKGVM

>sp|DHYS_METKA|PROBABLE deoxyhypusine synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 YPVLAKGVM 10
+P+LA GVM
Sbjct: 283 FPLLASGVM 291


>sp|DP2S_METTH|DNA polymerase II small subunit|Methanothermobacter thermautotrophicus

Query: 3 PVLAKGVM 10
PVL +GVM
Sbjct: 469 PVLNRGVM 476


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 YPVLAK 7
YPVLAK
Sbjct: 78 YPVLAK 83


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YPVLAK 7
YPVLAK
Sbjct: 75 YPVLAK 80


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 YPVLAK 7
YP+LAK
Sbjct: 75 YPILAK 80


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 2 YPVLAKG 8
YP+++KG
Sbjct: 103 YPIVSKG 109


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 2 YPVLAKG 8
YP+++KG
Sbjct: 103 YPIVSKG 109


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 1 YYPVLAKGVM 10
YY V+ +G++
Sbjct: 347 YYAVVGRGIV 356


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 YYPVLAKGVM 10
YYP + G M
Sbjct: 328 YYPAVVGGTM 337


>sp|DTDA_AERPE|D-AMINOACYL-TRNA deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 YPVLAKGVM 10
YP LAK ++
Sbjct: 110 YPALAKALL 118


>sp|RIFK_METAR|RIBOFLAVIN kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 YPVLAKGV 9
YPV KGV
Sbjct: 165 YPVRIKGV 172




38|SequenceR|195|186|PLIQRYYPVL

>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LIQRYYPV 9
LI+RYYPV
Sbjct: 482 LIKRYYPV 489


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LIQRYYP 8
LIQ+YYP
Sbjct: 97 LIQKYYP 103


>sp|KDGK_SULTO|2-DEHYDRO-3-DEOXYGLUCONOKINASE tokodaii (strain DSM 16993

Query: 2 LIQRYYPV 9
IQR+YPV
Sbjct: 91 FIQRHYPV 98


>sp|PSB_METBU|PROTEASOME subunit beta|Methanococcoides burtonii (strain DSM 6242

Query: 4 QRYYPVL 10
QRYYP++
Sbjct: 99 QRYYPLM 105


>sp|GSA_ARCFU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LIQRYYPVL 10
LIQ+Y+P +
Sbjct: 97 LIQKYFPSM 105


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 2 LIQRYYPVL 10
+I+ YYP+L
Sbjct: 560 IIEEYYPLL 568


>sp|MPTE_METTH|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 1 PLIQRYYPVL 10
P ++RY P+L
Sbjct: 129 PALRRYLPLL 138


>sp|PSB_METMS|PROTEASOME subunit beta|Methanohalophilus mahii (strain ATCC 35705

Query: 4 QRYYPVL 10
QRY+P++
Sbjct: 99 QRYFPLM 105


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PLIQRYYP 8
PL++R YP
Sbjct: 351 PLLKRPYP 358


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 LIQRYYPVL 10
L+ RY PVL
Sbjct: 60 LLDRYEPVL 68


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 LIQRYYPVL 10
L+ RY PVL
Sbjct: 60 LLDRYEPVL 68


>sp|FAU1_THEPD|PROBABLE ribonuclease FAU-1|Thermofilum pendens (strain DSM 2475

Query: 2 LIQRYYPVL 10
L RYYP L
Sbjct: 253 LRSRYYPTL 261


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LIQRYYP 8
LIQ+Y+P
Sbjct: 447 LIQKYHP 453


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LIQRYYP 8
LIQ+Y+P
Sbjct: 447 LIQKYHP 453


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LIQRYYP 8
LIQRY P
Sbjct: 178 LIQRYAP 184


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 LIQRYYPVL 10
+I+ YYP+L
Sbjct: 511 IIRDYYPLL 519


>sp|TRPC_AERPE|INDOLE-3-GLYCEROL phosphate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PLIQRYYPVL 10
P RY PVL
Sbjct: 101 PYFARYKPVL 110


>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 2 LIQRYYP 8
LIQRY P
Sbjct: 178 LIQRYAP 184


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 2 LIQRYYP 8
LIQRY P
Sbjct: 178 LIQRYAP 184


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LIQRYYP 8
LIQRY P
Sbjct: 178 LIQRYAP 184


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PLIQRYYPVL 10
PL+ R P+L
Sbjct: 285 PLVNRKVPIL 294


>sp|RNH2_METTH|RIBONUCLEASE HII|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 RYYPV 9
RYYPV
Sbjct: 136 RYYPV 140


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 2 LIQRYYPVL 10
++ +YYP+L
Sbjct: 516 VLNQYYPLL 524


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 3 IQRYYP 8
+QR+YP
Sbjct: 365 VQRFYP 370


>sp|ENDA_NANEQ|TRNA-SPLICING endonuclease|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PLIQRYY 7
PLI+ YY
Sbjct: 18 PLIEAYY 24




39|SequenceR|200|191|FINLVPLIQR

>sp|CAPPA_PICTO|PHOSPHOENOLPYRUVATE carboxylase|Picrophilus torridus (strain ATCC 700027

Query: 2 INLVPLIQ 9
IN++PLI+
Sbjct: 179 INIIPLIE 186


>sp|RL30_PICTO|LARGE ribosomal subunit protein uL30|Picrophilus torridus (strain ATCC

Query: 1 FINLVPLIQ 9
F NLVP+I+
Sbjct: 107 FKNLVPVIR 115




40|SequenceR|205|196|GNMNKFINLV

>sp|RS2_METB6|SMALL ribosomal subunit protein uS2|Methanoregula boonei (strain DSM

Query: 2 NMNKFINLV 10
NM KF++LV
Sbjct: 154 NMTKFVDLV 162


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GNMNKFINL 9
GN+ FINL
Sbjct: 99 GNVEHFINL 107


>sp|MTRA_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina acetivorans (strain

Query: 1 GNMNKF 6
GN+NKF
Sbjct: 205 GNLNKF 210


>sp|Y504_METJA|UNCHARACTERIZED protein MJ0504|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNMNKFINL 9
NMN F N+
Sbjct: 168 ANMNTFFNI 176


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GNMNKFINL 9
GN+N+ IN+
Sbjct: 689 GNINRAINI 697


>sp|MTRA_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 1 GNMNKF 6
GN+NKF
Sbjct: 205 GNLNKF 210


>sp|MTRA_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina barkeri (strain Fusaro

Query: 1 GNMNKF 6
GN+NKF
Sbjct: 205 GNLNKF 210


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GNMNKFINLV 10
G+M K INL+
Sbjct: 194 GDMRKAINLL 203


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GNMNKFINLV 10
G+M K INL+
Sbjct: 194 GDMRKAINLL 203


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GNMNKFINLV 10
G+M K INL+
Sbjct: 194 GDMRKAINLL 203


>sp|SRP54_SACI7|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 2 NMNKFINLV 10
NMNK + +V
Sbjct: 423 NMNKLLKMV 431


>sp|SRP54_SACI6|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain M.16.4

Query: 2 NMNKFINLV 10
NMNK + +V
Sbjct: 423 NMNKLLKMV 431


>sp|SRP54_SACI4|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 2 NMNKFINLV 10
NMNK + +V
Sbjct: 423 NMNKLLKMV 431


>sp|SRP54_SACI3|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 2 NMNKFINLV 10
NMNK + +V
Sbjct: 423 NMNKLLKMV 431


>sp|SRP54_SACI2|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 2 NMNKFINLV 10
NMNK + +V
Sbjct: 423 NMNKLLKMV 431


>sp|SRP54_SACI1|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 2 NMNKFINLV 10
NMNK + +V
Sbjct: 423 NMNKLLKMV 431




41|SequenceR|210|201|PLSYSGNMNK

>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 PLSYSGNMNK 10
PL Y GN NK
Sbjct: 635 PLEYMGNCNK 644


>sp|AATE_METBF|A-TYPE ATP synthase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 2 LSYSGNMN 9
LSY+GN++
Sbjct: 135 LSYAGNLD 142


>sp|AATE_METMA|A-TYPE ATP synthase subunit E|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LSYSGNMN 9
LSY+GN++
Sbjct: 135 LSYAGNID 142


>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 PLSYSG 6
P+SYSG
Sbjct: 294 PISYSG 299


>sp|Y256_SACS2|UPF0215 protein SSO0256|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PLSYSGNMNK 10
PLSY G K
Sbjct: 12 PLSYKGGKGK 21


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PLSYSGNM 8
PL Y GN+
Sbjct: 469 PLGYGGNI 476


>sp|Y960_SACI1|UPF0215 protein YN1551_0960|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PLSYSGNMNK 10
PLSY G K
Sbjct: 12 PLSYKGGKGK 21


>sp|Y1993_SACI2|UPF0215 protein LS215_1993|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PLSYSGNMNK 10
PLSY G K
Sbjct: 12 PLSYKGGKGK 21


>sp|Y1961_SACI3|UPF0215 protein M1627_1961|Saccharolobus islandicus (strain M.16.27)

Query: 1 PLSYSGNMNK 10
PLSY G K
Sbjct: 12 PLSYKGGKGK 21


>sp|Y1960_SACI7|UPF0215 protein YG5714_1960|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PLSYSGNMNK 10
PLSY G K
Sbjct: 12 PLSYKGGKGK 21


>sp|Y1891_SACI6|UPF0215 protein M164_1891|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PLSYSGNMNK 10
PLSY G K
Sbjct: 12 PLSYKGGKGK 21


>sp|Y1884_SACI4|UPF0215 protein M1425_1884|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PLSYSGNMNK 10
PLSY G K
Sbjct: 12 PLSYKGGKGK 21


>sp|GLYA_METPE|SERINE hydroxymethyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 PLSYSGNM 8
P+S+SG M
Sbjct: 129 PVSFSGKM 136




42|SequenceR|215|206|SCELRPLSYS

>sp|Y160_METLZ|PUTATIVE HTH-type transcriptional regulatory protein|Methanocorpusculum

Query: 2 CELRPLSY 9
CE+RP S+
Sbjct: 25 CEIRPRSF 32


>sp|Y1633_METJA|UNCHARACTERIZED protein MJ1633|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CELRPLSY 9
CEL P SY
Sbjct: 87 CELSPNSY 94


>sp|ECFA_METTH|ENERGY-COUPLING factor transporter ATP-binding protein|Methanothermobacter

Query: 3 ELRPLSYS 10
ELR LSYS
Sbjct: 3 ELRDLSYS 10


>sp|MTNA_METAC|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosarcina acetivorans

Query: 1 SCELRPLS 8
+CE RPL+
Sbjct: 195 ACETRPLN 202


>sp|MTNA_ARCFU|PUTATIVE methylthioribose-1-phosphate isomerase|Archaeoglobus fulgidus

Query: 1 SCELRPLS 8
+CE RPL+
Sbjct: 183 ACETRPLN 190


>sp|RS28_NANEQ|SMALL ribosomal subunit protein eS28|Nanoarchaeum equitans (strain

Query: 3 ELRPLSYS 10
E RPL YS
Sbjct: 80 EARPLEYS 87


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 CELRP 6
CELRP
Sbjct: 494 CELRP 498


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 CELRPLS 8
C+LRP S
Sbjct: 87 CDLRPTS 93


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 2 CELRPLS 8
C+LRP S
Sbjct: 87 CDLRPTS 93


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4

Query: 2 CELRPLS 8
C+LRP S
Sbjct: 87 CDLRPTS 93


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 2 CELRPLS 8
C+LRP S
Sbjct: 87 CDLRPTS 93


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 2 CELRPLS 8
C+LRP S
Sbjct: 87 CDLRPTS 93


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 2 CELRPLS 8
C+LRP S
Sbjct: 87 CDLRPTS 93


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 2 CELRPLS 8
C+LRP S
Sbjct: 87 CDLRPTS 93


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 CELRPLS 8
C+LRP S
Sbjct: 87 CDLRPTS 93


>sp|Y1526_METAR|PUTATIVE HTH-type transcriptional regulatory protein|Methanocella

Query: 2 CELRPLSY 9
C++RP S+
Sbjct: 25 CDIRPRSF 32




43|SequenceR|220|211|AMIAGSCELR

>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 3 IAGSCEL 9
++GSCE+
Sbjct: 448 VSGSCEI 454


>sp|MTRA_METHJ|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanospirillum hungatei JF-1

Query: 1 AMIAGSCE 8
A IAGSC+
Sbjct: 46 AAIAGSCK 53




44|SequenceR|225|216|DLNCRAMIAG

>sp|RL2_ARCFU|LARGE ribosomal subunit protein uL2|Archaeoglobus fulgidus (strain ATCC

Query: 3 NCRAMIA 9
NCRAMI
Sbjct: 151 NCRAMIG 157


>sp|Y719_THEVO|UNCHARACTERIZED protein TV0719|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DLNCRAMI 8
D+NC A++
Sbjct: 20 DVNCEAIV 27


>sp|TRM9_HALVD|TRNA (carboxymethyluridine(34)-5-O)-methyltransferase|Haloferax volcanii

Query: 3 NCRAMIAG 10
NC A++AG
Sbjct: 209 NCYAVVAG 216




45|SequenceR|230|221|SSGLHDLNCR

>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 1 SSGLHDLNC 9
S+ LH LNC
Sbjct: 132 SAALHSLNC 140


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 SSGLHDLNC 9
S+ +H LNC
Sbjct: 132 SAAIHSLNC 140


>sp|Y1617_METMA|PUTATIVE nickel insertion protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SSGLHDLNC 9
S+ +H LNC
Sbjct: 132 SAAIHSLNC 140


>sp|PMD_HALVD|PHOSPHOMEVALONATE decarboxylase|Haloferax volcanii (strain ATCC 29605

Query: 2 SGLHDLNCR 10
SG++D +CR
Sbjct: 153 SGMNDTDCR 161


>sp|AROE_SULTO|SHIKIMATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 LHDLNC 9
LHDL+C
Sbjct: 136 LHDLDC 141


>sp|TRMY_META3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus aeolicus

Query: 1 SSGLHDLNCR 10
SSG DL CR
Sbjct: 25 SSGRMDLVCR 34


>sp|RF1_HALWD|PEPTIDE chain release factor subunit|Haloquadratum walsbyi (strain DSM

Query: 2 SGLHDL 7
SGLHDL
Sbjct: 263 SGLHDL 268


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 5 HDLNCR 10
H++NCR
Sbjct: 367 HEINCR 372


>sp|FAU1_PYRNV|PROBABLE ribonuclease FAU-1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 SSGLHDL 7
S+GLHD+
Sbjct: 86 SAGLHDV 92


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SSGLHDL 7
S+GLHD+
Sbjct: 86 SAGLHDV 92


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 SSGLHDLNCR 10
SSG DL CR
Sbjct: 25 SSGRLDLICR 34


>sp|TRMY_METM7|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 SSGLHDLNCR 10
SSG DL CR
Sbjct: 25 SSGRLDLLCR 34


>sp|TRMY_METVS|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 SSGLHDLNCR 10
SSG DL CR
Sbjct: 25 SSGRLDLICR 34


>sp|TRMY_METMP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 SSGLHDLNCR 10
SSG DL CR
Sbjct: 25 SSGRLDLLCR 34


>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 3 GLHDLNC 9
G+H +NC
Sbjct: 109 GVHPVNC 115


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 2 SGLHDLNC 9
+GLHD C
Sbjct: 354 AGLHDQYC 361




46|SequenceR|235|226|STPPDSSGLH

>sp|KAE1_CALMQ|TRNA N6-adenosine threonylcarbamoyltransferase|Caldivirga

Query: 2 TPPDSSGLH 10
TPP SG+H
Sbjct: 32 TPPQGSGIH 40


>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 STPPDSSG 8
S+PP SSG
Sbjct: 221 SSPPQSSG 228


>sp|HIS4_METPE|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosphaerula palustris

Query: 1 STPPDSSGLH 10
S+P D GLH
Sbjct: 199 SSPADLQGLH 208


>sp|THI4_METMJ|THIAMINE thiazole synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TPPDSSGLH 10
TP D +GLH
Sbjct: 146 TPVDMAGLH 154


>sp|GVPA1_HALSA|GAS vesicle protein A1|Halobacterium salinarum (strain ATCC 700922

Query: 4 PDSSGL 9
PDSSGL
Sbjct: 4 PDSSGL 9


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 PDSSGLH 10
PDS GLH
Sbjct: 34 PDSGGLH 40


>sp|Y273_METTH|UPF0098 protein MTH_273|Methanothermobacter thermautotrophicus (strain

Query: 1 STPPDSSGLH 10
+ PPDS+GL
Sbjct: 62 NIPPDSTGLE 71


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PDSSGLH 10
PD GLH
Sbjct: 238 PDQKGLH 244


>sp|DP2S_HALSA|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 1 STPPDSSGLH 10
STPPD + H
Sbjct: 77 STPPDEATTH 86


>sp|DP2S_HALS3|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 1 STPPDSSGLH 10
STPPD + H
Sbjct: 77 STPPDEATTH 86


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 4 PDSSGLH 10
PD+ GLH
Sbjct: 9057 PDTRGLH 9063


>sp|KAE1_METTP|TRNA N6-adenosine threonylcarbamoyltransferase|Methanothrix

Query: 1 STPPDSSGL 9
STP +SSG+
Sbjct: 302 STPIESSGV 310


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 PDSSGLH 10
PDS G+H
Sbjct: 36 PDSGGIH 42


>sp|KAE1B_HALMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 PDSSGLH 10
PDS G+H
Sbjct: 41 PDSGGIH 47


>sp|KAE1_PYRIL|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum islandicum

Query: 3 PPDSSGLH 10
PP +G+H
Sbjct: 33 PPSGAGIH 40


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 3 PPDSSGL 9
P DSSGL
Sbjct: 224 PTDSSGL 230


>sp|LIPA_PICTO|LIPOYL synthase|Picrophilus torridus (strain ATCC 700027

Query: 4 PDSSGLH 10
PD SG+H
Sbjct: 134 PDFSGVH 140




47|SequenceR|240|231|AVQSASTPPD

>sp|GPMI_HALWD|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AVQSASTP 8
AVQ+ASTP
Sbjct: 21 AVQTASTP 28


>sp|DP2S_HALSA|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 5 ASTPPD 10
ASTPPD
Sbjct: 76 ASTPPD 81


>sp|DP2S_HALS3|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 5 ASTPPD 10
ASTPPD
Sbjct: 76 ASTPPD 81




48|SequenceR|245|236|NVIIEAVQSA

***** No hits found ******


49|SequenceR|250|241|IGDGSNVIIE

>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 GDGSNVIIE 10
GDG+ V+IE
Sbjct: 169 GDGTPVVIE 177


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 IGDGSNVIIE 10
IG+G VI+E
Sbjct: 121 IGEGKKVIVE 130


>sp|OTC_METLZ|ORNITHINE carbamoyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 IGDGSNV 7
IGDG+NV
Sbjct: 156 IGDGNNV 162


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 1 IGDGSNVIIE 10
IGD NVI E
Sbjct: 386 IGDDKNVIAE 395


>sp|OTC_METHJ|ORNITHINE carbamoyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IGDGSNV 7
IGDG+NV
Sbjct: 156 IGDGNNV 162


>sp|OTC_METMA|ORNITHINE carbamoyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IGDGSNV 7
IGDG+NV
Sbjct: 156 IGDGNNV 162


>sp|OTC_CENSY|ORNITHINE carbamoyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 IGDGSNV 7
IGDG+NV
Sbjct: 157 IGDGNNV 163


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IGDGSNV 7
+GDG+NV
Sbjct: 161 VGDGNNV 167


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 IGDGSNV 7
+GDG+NV
Sbjct: 161 VGDGNNV 167


>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 IGDGSNV 7
+GDG+NV
Sbjct: 162 VGDGNNV 168


>sp|OTC_ARCFU|ORNITHINE carbamoyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IGDGSNV 7
+GDG+NV
Sbjct: 155 VGDGNNV 161


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 1 IGDGSNV 7
+GDG+NV
Sbjct: 161 VGDGNNV 167


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 2 GDGSNVII 9
GDG NVI+
Sbjct: 330 GDGKNVIM 337


>sp|PSTOM_PYRHO|STOMATIN homolog PH1511|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GDGSNVII 9
GD SNVI+
Sbjct: 230 GDKSNVIV 237


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IGDGSNVIIE 10
IG G VI+E
Sbjct: 115 IGKGKKVIVE 124


>sp|OTC_METAC|ORNITHINE carbamoyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IGDGSNV 7
+GDG+NV
Sbjct: 156 VGDGNNV 162


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IGDGSNVIIE 10
IG G VI+E
Sbjct: 115 IGKGKKVIVE 124


>sp|OTC_METBF|ORNITHINE carbamoyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IGDGSNV 7
+GDG+NV
Sbjct: 156 VGDGNNV 162


>sp|OTC_METMJ|ORNITHINE carbamoyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IGDGSNV 7
+GDG+NV
Sbjct: 156 VGDGNNV 162


>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IGDGSNV 7
+GDG+NV
Sbjct: 161 VGDGNNV 167


>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IGDGSNVI 8
+GDG NV+
Sbjct: 143 VGDGDNVV 150


>sp|OTC_METST|ORNITHINE carbamoyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IGDGSNV 7
IGDG+NV
Sbjct: 151 IGDGNNV 157


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 1 IGDGSNVIIE 10
I DG N+I++
Sbjct: 160 IADGPNIILQ 169


>sp|OTC_HALWD|ORNITHINE carbamoyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IGDGSNV 7
IGDG+NV
Sbjct: 154 IGDGNNV 160


>sp|OTC_METTH|ORNITHINE carbamoyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 IGDGSNV 7
+GDG+NV
Sbjct: 149 VGDGNNV 155


>sp|PURA_HALSA|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IGDGSNVIIE 10
I DG NV++E
Sbjct: 218 IADGDNVMLE 227


>sp|PURA_HALS3|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 1 IGDGSNVIIE 10
I DG NV++E
Sbjct: 218 IADGDNVMLE 227


>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IGDGSNV 7
+GDG+NV
Sbjct: 151 VGDGNNV 157


>sp|OTCC_HALSA|ORNITHINE carbamoyltransferase, catabolic|Halobacterium salinarum (strain

Query: 1 IGDGSNV 7
+GDG+NV
Sbjct: 150 VGDGNNV 156


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IGDGSNVIIE 10
+G G VI+E
Sbjct: 120 LGSGKKVIVE 129


>sp|Y231_METTH|UNCHARACTERIZED methyltransferase MTH_231|Methanothermobacter thermautotrophicus

Query: 1 IGDGSNVII 9
+ DG NVII
Sbjct: 169 VADGCNVII 177


>sp|RS4E_METS3|SMALL ribosomal subunit protein eS4|Methanobrevibacter smithii (strain

Query: 1 IGDGSNVIIE 10
+ DG NVII+
Sbjct: 140 LHDGKNVIID 149


>sp|PUR2_METBU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 DGSNVIIE 10
DG NV++E
Sbjct: 178 DGDNVVVE 185


>sp|RGYRB_NANEQ|REVERSE gyrse subunit B|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 GDGSNVII 9
GDG N++I
Sbjct: 512 GDGINILI 519


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC

Query: 1 IGDGSNVI 8
+GDGS+++
Sbjct: 77 LGDGSSIV 84




50|SequenceR|255|246|QQSYDIGDGS

>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 QQSYDIGDGS 10
+Q+YDI +GS
Sbjct: 730 KQTYDIKEGS 739


>sp|MPGP_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QSYDIGDG 9
+SY +GDG
Sbjct: 198 ESYAVGDG 205


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 2 QSYDIGDG 9
Q+Y++GDG
Sbjct: 332 QAYELGDG 339


>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 2 QSYDIGDG 9
+SY +GDG
Sbjct: 198 RSYAVGDG 205


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QSYDIGD 8
+ YDIGD
Sbjct: 316 KEYDIGD 322


>sp|Y221_METM6|UPF0305 protein MmarC6_0221|Methanococcus maripaludis (strain C6 /

Query: 1 QQSYDIG 7
++SYD+G
Sbjct: 12 EESYDVG 18


>sp|Y1841_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus

Query: 3 SYDIGDGS 10
SYD DGS
Sbjct: 14 SYDYPDGS 21


>sp|GLNB2_METTH|NITROGEN regulatory protein P-II 2|Methanothermobacter thermautotrophicus

Query: 2 QSYDIGDG 9
Q+ DIGDG
Sbjct: 85 QTGDIGDG 92


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QSYDIGDG 9
QS +IGDG
Sbjct: 185 QSTNIGDG 192


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 4 YDIGDGS 10
+D+GDGS
Sbjct: 78 HDMGDGS 84




51|SequenceR|260|251|INERKQQSYD

***** No hits found ******


52|SequenceR|265|256|QILDGINERK

>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 2 ILDGINERK 10
ILD +NERK
Sbjct: 75 ILDKVNERK 83


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ILDGINERK 10
ILD +NERK
Sbjct: 75 ILDKVNERK 83


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 2 ILDGINERK 10
ILD +NERK
Sbjct: 75 ILDRVNERK 83


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 2 ILDGINERK 10
ILD +NERK
Sbjct: 75 ILDRVNERK 83


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ILDGINERK 10
+LD +NERK
Sbjct: 75 VLDRVNERK 83


>sp|Y1808_PYRHO|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus horikoshii

Query: 1 QILDGINERK 10
++L GI+ERK
Sbjct: 241 ELLTGIDERK 250


>sp|Y1409_KORCO|UPF0179 protein Kcr_1409|Korarchaeum cryptofilum (strain OPF8)

Query: 2 ILDGINERK 10
++ G+NERK
Sbjct: 44 VVKGVNERK 52


>sp|Y539_THEKO|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 1 QILDGINERK 10
++L GI+ERK
Sbjct: 238 RLLTGIDERK 247


>sp|XACR_HALVD|HTH-TYPE transcriptional regulator XacR|Haloferax volcanii (strain ATCC

Query: 1 QILDGINER 9
Q+L+G+ ER
Sbjct: 177 QVLEGVRER 185


>sp|Y130_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5

Query: 2 ILDGINER 9
I+DGIN R
Sbjct: 59 IIDGINTR 66


>sp|APGM_METMJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanoculleus marisnigri (strain ATCC

Query: 2 ILDGINER 9
+LDGI++R
Sbjct: 10 VLDGISDR 17


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QILDGINERK 10
+ILD + ERK
Sbjct: 422 KILDSLGERK 431


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 2 ILDGINER 9
I++GINE+
Sbjct: 309 IIEGINEK 316


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ILDGINERK 10
+ DG+NE+K
Sbjct: 444 VKDGLNEKK 452


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LDGINERK 10
++G+NER+
Sbjct: 689 IEGVNERR 696


>sp|Y1562_METJA|PUTATIVE membrane protein MJ1562|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QILDGINER 9
+++D +NER
Sbjct: 180 RVMDDVNER 188


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 2 ILDGINERK 10
++D INE K
Sbjct: 588 VIDAINEEK 596


>sp|SUI1_AERPE|PROTEIN translation factor SUI1 homolog|Aeropyrum pernix (strain ATCC

Query: 2 ILDGINERK 10
I++GINE++
Sbjct: 40 IIEGINEKE 48


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 2 ILDGINERK 10
++D INE K
Sbjct: 588 VIDAINEEK 596


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 ILDGINERK 10
++D INE K
Sbjct: 588 VIDAINEEK 596


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 ILDGINERK 10
++D INE K
Sbjct: 588 VIDAINEEK 596


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 ILDGINERK 10
++D INE K
Sbjct: 588 VIDAINEEK 596


>sp|HEM1_METBU|GLUTAMYL-TRNA reductase|Methanococcoides burtonii (strain DSM 6242

Query: 2 ILDGINER 9
ILDG+N++
Sbjct: 167 ILDGLNDK 174


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 2 ILDGINERK 10
++D INE K
Sbjct: 588 VIDAINEEK 596




53|SequenceR|270|261|AELTEQILDG

>sp|THI4_AERPE|THIAMINE thiazole synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AELTEQILDG 10
A++TE ILDG
Sbjct: 9 ADVTEAILDG 18


>sp|THYX_HALSA|FLAVIN-DEPENDENT thymidylate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ELTEQILDG 10
ELTEQ+LD
Sbjct: 214 ELTEQLLDA 222


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 AELTEQILD 9
AEL E+ILD
Sbjct: 447 AELKEEILD 455


>sp|UPPS_METMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 1 AELTEQILD 9
AE+TEQ+++
Sbjct: 56 AEVTEQVIE 64


>sp|HEM1_METBF|GLUTAMYL-TRNA reductase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ELTEQILDG 10
+L E+ILDG
Sbjct: 161 DLAEEILDG 169


>sp|UPPS_METAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 1 AELTEQILD 9
AE+TEQ+++
Sbjct: 56 AEVTEQVIE 64


>sp|OTC_META3|ORNITHINE carbamoyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ELTEQILDG 10
E+T++++DG
Sbjct: 270 EITDEVIDG 278


>sp|OTC_METMA|ORNITHINE carbamoyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ELTEQILDG 10
E+T++++DG
Sbjct: 269 EITDEVMDG 277


>sp|OTC_PYRCJ|ORNITHINE carbamoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ELTEQILDG 10
E+T++++DG
Sbjct: 272 EVTDEVIDG 280


>sp|OTC_METM7|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 ELTEQILDG 10
E+T++++DG
Sbjct: 270 EITDEVIDG 278


>sp|HTAXP_HALS3|HEAT repeat-containing taxis protein OE_2401F|Halobacterium salinarum

Query: 4 TEQILDG 10
TEQ LDG
Sbjct: 186 TEQALDG 192


>sp|OTC_METMP|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ELTEQILDG 10
E+T++++DG
Sbjct: 270 EITDEVIDG 278


>sp|OTC_METM5|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 ELTEQILDG 10
E+T++++DG
Sbjct: 270 EITDEVIDG 278


>sp|OTC_METAC|ORNITHINE carbamoyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ELTEQILDG 10
E+T++++DG
Sbjct: 269 EITDEVMDG 277




54|SequenceR|275|266|GYREFAELTE

>sp|Y658_METJA|UNCHARACTERIZED protein MJ0658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GYREFAELTE 10
GYR+F +TE
Sbjct: 151 GYRKFISITE 160


>sp|NCSA_HALVD|TRNA 2-thiolation protein NcsA|Haloferax volcanii (strain ATCC 29605

Query: 1 GYREFAELT 9
GY E AELT
Sbjct: 274 GYEELAELT 282


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 2 YREFAELTE 10
YRE AEL +
Sbjct: 548 YREVAELPD 556


>sp|Y1289_HALVD|UNCHARACTERIZED protein HVO_1289|Haloferax volcanii (strain ATCC 29605

Query: 4 EFAELTE 10
EFAE+TE
Sbjct: 99 EFAEITE 105


>sp|REG2_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB00690|Pyrococcus abyssi

Query: 2 YREFAEL 8
YRE AEL
Sbjct: 23 YRELAEL 29


>sp|RIFK_THEVO|RIBOFLAVIN kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YREFAELT 9
Y EFAEL+
Sbjct: 77 YTEFAELS 84


>sp|GUAAA_THEKO|GMP synthase [glutamine-hydrolyzing] subunit A|Thermococcus

Query: 2 YREFAEL 8
YR FAEL
Sbjct: 178 YRNFAEL 184


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 2 YREFAELTE 10
Y FAELT+
Sbjct: 282 YEAFAELTD 290


>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 2 YREFAELTE 10
Y+EF+EL +
Sbjct: 171 YKEFSELVD 179


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GYREFAE 7
GY EFAE
Sbjct: 68 GYEEFAE 74


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 2 YREFAELTE 10
+REF+E+ E
Sbjct: 360 FREFSEILE 368


>sp|AATB3_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 1 GYREFAELT 9
GY E AE+T
Sbjct: 29 GYGEIAEIT 37


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 1 GYREFAEL 8
GYR+ AEL
Sbjct: 369 GYRQRAEL 376


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 REFAELTE 10
+ FAELTE
Sbjct: 207 KRFAELTE 214




55|SequenceR|280|271|FANEGGYREF

>sp|CBIF_METJA|COBALT-PRECORRIN-4 C(11)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 EGGYRE 9
EGGYRE
Sbjct: 182 EGGYRE 187


>sp|MTAD2_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ANEGGYREF 10
A EGGYR +
Sbjct: 330 ATEGGYRAY 338


>sp|GYRB_HALVD|DNA gyrase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 FANEGGYREF 10
F EGG REF
Sbjct: 220 FLFEGGIREF 229


>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 1 FANEGGYREF 10
F EGG REF
Sbjct: 220 FLFEGGIREF 229


>sp|ACTH_THEAC|ARCHAEAL actin homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FANEGGYRE 9
FAN GYR+
Sbjct: 312 FANALGYRD 320


>sp|ACTH_THEVO|ARCHAEAL actin homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FANEGGYRE 9
FAN GYR+
Sbjct: 312 FANALGYRD 320


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus fulgidus

Query: 2 ANEGGYREF 10
A EG ++EF
Sbjct: 194 ATEGNWKEF 202


>sp|Y527_METM7|UPF0200 protein MmarC7_0527|Methanococcus maripaludis (strain C7 /

Query: 3 NEGGYREF 10
NEG Y +F
Sbjct: 161 NEGNYNDF 168


>sp|RIFK_METB6|RIBOFLAVIN kinase|Methanoregula boonei (strain DSM 21154

Query: 1 FANEGGY 7
FA+EGG+
Sbjct: 86 FAHEGGH 92


>sp|Y1392_METM6|UPF0200 protein MmarC6_1392|Methanococcus maripaludis (strain C6 /

Query: 3 NEGGYREF 10
NEG Y +F
Sbjct: 161 NEGNYMDF 168


>sp|Y311_METM5|UPF0200 protein MmarC5_0311|Methanococcus maripaludis (strain C5 /

Query: 3 NEGGYREF 10
NEG Y +F
Sbjct: 161 NEGNYMDF 168




56|SequenceR|285|276|YKINIFANEG

>sp|CBID_THEAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 INIFANEG 10
INIFA EG
Sbjct: 94 INIFAGEG 101


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 2 KINIFANE 9
K N+FANE
Sbjct: 125 KFNLFANE 132


>sp|TRKA2_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 4 NIFANEG 10
N+F NEG
Sbjct: 221 NVFGNEG 227


>sp|RL18E_PYRFU|LARGE ribosomal subunit protein eL18|Pyrococcus furiosus (strain ATCC

Query: 2 KINIFANEG 10
KIN +AN+G
Sbjct: 51 KINRYANDG 59


>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 3 INIFANEG 10
+NIF+N G
Sbjct: 260 VNIFSNAG 267


>sp|HMVA_METVO|DNA-BINDING protein HmvA|Methanococcus voltae

Query: 2 KINIFANE 9
K+N+ ANE
Sbjct: 80 KVNMLANE 87


>sp|BPS2_ACIAM|PROTEIN bps2|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 INIFANEG 10
+N+FAN G
Sbjct: 55 LNVFANSG 62


>sp|RL18E_METHJ|LARGE ribosomal subunit protein eL18|Methanospirillum hungatei JF-1

Query: 2 KINIFANEG 10
KIN +A EG
Sbjct: 52 KINRYAQEG 60


>sp|Y1544_METJA|UNCHARACTERIZED protein MJ1544|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 INIFANE 9
IN+FANE
Sbjct: 254 INLFANE 260




57|SequenceR|290|281|YTPVVYKINI

>sp|PYRC_PYRAE|DIHYDROOROTASE aerophilum (strain ATCC 51768

Query: 3 PVVYKINI 10
P++YK+++
Sbjct: 103 PIIYKVHM 110




58|SequenceR|296|286|NLLCSEYTPVV

>sp|AROC_METS5|CHORISMATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LLCSEYTPV 10
+LCS+Y+PV
Sbjct: 173 ILCSKYSPV 181


>sp|AROC_SULTO|CHORISMATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LLCSEYTPV 10
+LCS+Y+PV
Sbjct: 174 VLCSKYSPV 182


>sp|AROC_SACS2|CHORISMATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LLCSEYTPV 10
+LCS+Y+PV
Sbjct: 174 VLCSKYSPV 182


>sp|AROC_SACI7|CHORISMATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LLCSEYTPV 10
+LCS+Y+PV
Sbjct: 174 VLCSKYSPV 182


>sp|AROC_SACI6|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LLCSEYTPV 10
+LCS+Y+PV
Sbjct: 174 VLCSKYSPV 182


>sp|AROC_SACI4|CHORISMATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LLCSEYTPV 10
+LCS+Y+PV
Sbjct: 174 VLCSKYSPV 182


>sp|AROC_SACI3|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 LLCSEYTPV 10
+LCS+Y+PV
Sbjct: 174 VLCSKYSPV 182


>sp|AROC_SACI2|CHORISMATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LLCSEYTPV 10
+LCS+Y+PV
Sbjct: 174 VLCSKYSPV 182


>sp|AROC_SACI1|CHORISMATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LLCSEYTPV 10
+LCS+Y+PV
Sbjct: 174 VLCSKYSPV 182


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 3 LCSEYTP 9
+CSEYTP
Sbjct: 284 VCSEYTP 290


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LCSEYTP 9
+CSEYTP
Sbjct: 284 VCSEYTP 290


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 3 LCSEYTP 9
+CSEYTP
Sbjct: 284 VCSEYTP 290


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 3 LCSEYTP 9
+CSEYTP
Sbjct: 284 VCSEYTP 290


>sp|OGT_PYRAE|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LLCSEYTPVV 11
++CS+Y PVV
Sbjct: 1 MICSQYGPVV 10


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 3 LCSEYTP 9
+CSEYTP
Sbjct: 284 VCSEYTP 290


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LLCSEYTPV 10
+ CS+Y+PV
Sbjct: 174 IFCSKYSPV 182


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LCSEYTP 9
+CS+YTP
Sbjct: 282 ICSKYTP 288


>sp|ARGB_METPE|ACETYLGLUTAMATE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LLCSEYTPVV 11
LL +EY PVV
Sbjct: 164 LLSNEYIPVV 173


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LCSEYTP 9
+CS+YTP
Sbjct: 283 VCSKYTP 289


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LCSEYTP 9
+CS+YTP
Sbjct: 283 VCSKYTP 289


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 3 LCSEYTP 9
+C+EY+P
Sbjct: 283 ICTEYSP 289


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 3 LCSEYTP 9
+CS YTP
Sbjct: 279 VCSRYTP 285


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LCSEYTP 9
+CS YTP
Sbjct: 279 VCSRYTP 285


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 3 LCSEYTP 9
+CS YTP
Sbjct: 283 VCSRYTP 289


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 3 LCSEYTP 9
+CS YTP
Sbjct: 276 VCSRYTP 282


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LCSEYTP 9
+CS YTP
Sbjct: 285 VCSSYTP 291


>sp|COBQ_METPE|PROBABLE cobyric acid synthase|Methanosphaerula palustris (strain ATCC

Query: 3 LCSEYTP 9
LCS++TP
Sbjct: 477 LCSDHTP 483


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 3 LCSEYTP 9
+C++YTP
Sbjct: 280 VCTDYTP 286


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 LCSEYTP 9
+C EYTP
Sbjct: 284 VCIEYTP 290


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 1 NLLCSEYTPVV 11
NLL E PVV
Sbjct: 387 NLLAGEKLPVV 397


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NLLCSEYTPVV 11
N+L +YT VV
Sbjct: 829 NILVKQYTDVV 839


>sp|FEN_METPE|FLAP endonuclease 1|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 NLLCSEY 7
+LLC EY
Sbjct: 300 DLLCGEY 306


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LCSEYTP 9
+CS Y+P
Sbjct: 279 ICSRYSP 285


>sp|PURA_PICTO|ADENYLOSUCCINATE synthetase|Picrophilus torridus (strain ATCC 700027

Query: 1 NLLCSEYTPVV 11
+ LCS Y VV
Sbjct: 20 DYLCSNYDDVV 30


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 4 CSEYTPV 10
C EY P+
Sbjct: 657 CKEYCPI 663


>sp|Y1307_METJA|UNCHARACTERIZED protein MJ1307|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 EYTPVV 11
EYTP++
Sbjct: 107 EYTPII 112




THE END