PACRG_HUMAN Blast Output
Archaea
1|Sequence|1|10|MVAEKETLSL

>sp|RFCS_METM6|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C6 /

Query: 2 VAEKETLSL 10
++EKETL+L
Sbjct: 171 ISEKETLTL 179


>sp|RFCS_METM5|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C5 /

Query: 2 VAEKETLSL 10
++EKETL+L
Sbjct: 171 ISEKETLTL 179




2|Sequence|6|15|ETLSLNKCPD

>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ETLSLNKCPD 10
ET+S + CPD
Sbjct: 121 ETVSQSYCPD 130


>sp|NOP10_METS3|RIBOSOME biogenesis protein Nop10|Methanobrevibacter smithii (strain ATCC

Query: 2 TLSLNKCPD 10
+ +NKCPD
Sbjct: 2 NMKMNKCPD 10


>sp|CSG_METAC|MAJOR S-layer protein|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ETLSLNKCPD 10
ETLS+ PD
Sbjct: 74 ETLSIEDVPD 83


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TLSLNKCP 9
TLS KCP
Sbjct: 629 TLSDQKCP 636


>sp|NOP10_PYRAE|RIBOSOME biogenesis protein Nop10|Pyrobaculum aerophilum (strain ATCC

Query: 2 TLSLNKCP 9
TLS +KCP
Sbjct: 15 TLSKDKCP 22




3|Sequence|11|20|NKCPDKMPKR

>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CPDKMPKR 10
CP K+P+R
Sbjct: 132 CPGKIPER 139


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 4 PDKMPKR 10
PD +PKR
Sbjct: 100 PDHVPKR 106


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CPDKMPKR 10
CP K+P+R
Sbjct: 138 CPGKIPER 145


>sp|COFH_METBU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcoides burtonii (strain DSM

Query: 3 CPDKMPKR 10
CPDK+ ++
Sbjct: 180 CPDKLTRQ 187


>sp|PURA_THEKO|ADENYLOSUCCINATE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 DKMPKR 10
DK+PKR
Sbjct: 299 DKLPKR 304


>sp|T2M6_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 KCPDKMPKR 10
KCP+ PK+
Sbjct: 176 KCPNGKPKK 184


>sp|Y1775_ARCFU|PUTATIVE aminohydrolase AF_1775|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NKCPDKM 7
N CP+K+
Sbjct: 205 NSCPEKI 211


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 NKCPDKMP 8
N C DK P
Sbjct: 235 NMCTDKKP 242


>sp|Y086_METJA|UNCHARACTERIZED protein MJ0086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KCPDKMPKR 10
K PDK P++
Sbjct: 4 KSPDKSPEK 12


>sp|HIS51_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 NKCPDKMP 8
NKC K+P
Sbjct: 70 NKCVQKVP 77




4|Sequence|16|25|KMPKRTKLLA

>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 KMPKRTKLL 9
K+PK +KLL
Sbjct: 581 KIPKSSKLL 589


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KMPKRTKLL 9
++PK TKLL
Sbjct: 591 RVPKTTKLL 599


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KMPKRTKLL 9
++PK TKLL
Sbjct: 582 QVPKSTKLL 590


>sp|NPPNK_METMP|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanococcus maripaludis (strain DSM

Query: 1 KMPKRTKLLA 10
K+ KRTKL+
Sbjct: 404 KVEKRTKLMG 413


>sp|CDC62_THEAC|ORC1-TYPE DNA replication protein 2|Thermoplasma acidophilum (strain ATCC

Query: 1 KMPKRTKL 8
KMPK+T+
Sbjct: 395 KMPKQTRF 402


>sp|GUAAA_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus furiosus

Query: 1 KMPKRTKLLA 10
K+P + KLLA
Sbjct: 133 KLPPKFKLLA 142


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 PKRTKLLA 10
PKR KLLA
Sbjct: 359 PKRLKLLA 366




5|Sequence|21|30|TKLLAQQPLP

>sp|ARGX_SULAC|GLUTAMATE--LYSW ligase ArgX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LAQQPLP 10
+AQ+PLP
Sbjct: 33 VAQEPLP 39


>sp|NIFH_METMA|NITROGENASE iron protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TKLLAQQPLP 10
TKL+ PLP
Sbjct: 248 TKLVVPTPLP 257


>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 LAQQPLP 10
+AQ+PLP
Sbjct: 33 VAQEPLP 39




6|Sequence|26|35|QQPLPVHQPH

>sp|COFH_METTH|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanothermobacter thermautotrophicus

Query: 3 PLPVHQPH 10
PLP PH
Sbjct: 251 PLPFMHPH 258


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 VHQPH 10
VHQPH
Sbjct: 9 VHQPH 13


>sp|GGGPS_PYRHO|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QPLPVHQP 9
+P+P H+P
Sbjct: 150 RPIPRHKP 157


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PLPVHQPH 10
P PVH H
Sbjct: 738 PAPVHYAH 745


>sp|GGGPS_PYRFU|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QPLPVHQP 9
+P+P H+P
Sbjct: 147 KPIPRHKP 154


>sp|GGGPS_PYRAB|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 QPLPVHQP 9
+P+P H+P
Sbjct: 149 KPIPRHKP 156


>sp|Y1688_HALSA|UNCHARACTERIZED protein VNG_1688C|Halobacterium salinarum (strain ATCC 700922

Query: 1 QQPLPVHQP 9
Q P+ +H+P
Sbjct: 127 QHPISLHEP 135


>sp|GGGPS_THEGJ|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 QPLPVHQP 9
+P+P H+P
Sbjct: 148 KPIPRHKP 155


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 QQPLPVHQ 8
Q+PLPV Q
Sbjct: 88 QRPLPVLQ 95


>sp|GGGPS_THEKO|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QPLPVHQP 9
+P+P H+P
Sbjct: 148 KPIPRHKP 155


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 QQPLPVHQP 9
Q P+P H P
Sbjct: 96 QMPVPDHVP 104


>sp|THII_HALSA|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 700922

Query: 4 LPVHQP 9
LPVH+P
Sbjct: 315 LPVHRP 320


>sp|THII_HALS3|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 29341

Query: 4 LPVHQP 9
LPVH+P
Sbjct: 315 LPVHRP 320




7|Sequence|31|40|VHQPHSLVSE

>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VHQPHSLVSE 10
VHQPH L E
Sbjct: 9 VHQPHRLNKE 18


>sp|TRM1_META3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus aeolicus

Query: 2 HQPHSLVSE 10
H PHS+ S+
Sbjct: 350 HNPHSIKSD 358


>sp|RIBL_METLZ|FAD synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VHQPHSLVSE 10
VH+P +VSE
Sbjct: 42 VHKPRPIVSE 51


>sp|SPEE_PYRAE|POLYAMINE aminopropyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HQPHSLVSE 10
H PHSL +E
Sbjct: 247 HDPHSLSAE 255


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VHQPHSLVS 9
VH H L+S
Sbjct: 220 VHSEHGLIS 228




8|Sequence|36|45|SLVSEGFTVK

>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 VSEGFTVK 10
V EGFTVK
Sbjct: 481 VPEGFTVK 488


>sp|DNLI_THEVO|DNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SLVSEGFTVK 10
SLV+E TVK
Sbjct: 104 SLVNEDLTVK 113


>sp|HYD2A_PYRFU|SULFHYDROGENASE 2 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LVSEGFTVK 10
LV EG T+K
Sbjct: 131 LVKEGLTIK 139




9|Sequence|41|50|GFTVKAMMKN

>sp|HPRT_META3|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 GFTVKAMMK 9
G TVK +MK
Sbjct: 164 GHTVKTLMK 172


>sp|MCRB_METVA|METHYL-COENZYME M reductase subunit beta|Methanococcus vannielii

Query: 3 TVKAMMKN 10
T+K+M+KN
Sbjct: 34 TIKSMLKN 41




10|Sequence|46|55|AMMKNSVVRG

>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 2 MMKNSVVRG 10
MM N+VV+G
Sbjct: 159 MMLNAVVQG 167


>sp|GLMM_PYRHO|PROBABLE phosphoglucosamine mutase|Pyrococcus horikoshii (strain ATCC

Query: 2 MMKNSVVRG 10
M+KN+V+ G
Sbjct: 51 MLKNAVISG 59


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 KNSVVRG 10
KN+VVRG
Sbjct: 372 KNNVVRG 378




11|Sequence|51|60|SVVRGPPAAG

>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC

Query: 2 VVRGPPAAG 10
+ RGPP G
Sbjct: 59 IARGPPGTG 67


>sp|MTNA_METJA|PUTATIVE methylthioribose-1-phosphate isomerase|Methanocaldococcus

Query: 2 VVRGPPAAG 10
VVRG PA G
Sbjct: 48 VVRGAPAIG 56


>sp|KAD6_THEVO|PUTATIVE adenylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SVVRGPPAAG 10
+ + GPP AG
Sbjct: 5 ACITGPPGAG 14


>sp|KCY_HALWD|CYTIDYLATE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 VRGPPAAG 10
V GPP AG
Sbjct: 5 VSGPPGAG 12


>sp|NADE_PICTO|NH(3)-DEPENDENT NAD(+) synthetase|Picrophilus torridus (strain ATCC 700027

Query: 1 SVVRGPPAAG 10
S++R P+AG
Sbjct: 174 SIIRKKPSAG 183


>sp|KAD_ARCFU|ADENYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GPPAAG 10
GPP AG
Sbjct: 7 GPPGAG 12


>sp|MTNA_METTH|PUTATIVE methylthioribose-1-phosphate isomerase|Methanothermobacter

Query: 2 VVRGPPAAG 10
VVRG PA G
Sbjct: 44 VVRGAPAIG 52


>sp|ACYP_SACS2|ACYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 2 VVRGPPAA 9
+ +GPPAA
Sbjct: 72 IKQGPPAA 79


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VRGPPAAG 10
+ GPP AG
Sbjct: 52 ITGPPGAG 59


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 3 VRGPPAAG 10
+ GPP AG
Sbjct: 50 ITGPPGAG 57


>sp|CDC66_HALSA|ORC1-TYPE DNA replication protein 6|Halobacterium salinarum (strain ATCC

Query: 2 VVRGPPAAG 10
V RGPP G
Sbjct: 59 VARGPPGTG 67


>sp|ACYP_AERPE|ACYLPHOSPHATASE pernix (strain ATCC 700893

Query: 3 VRGPPAA 9
+RGPPAA
Sbjct: 72 LRGPPAA 78


>sp|ACYP_CALMQ|ACYLPHOSPHATASE maquilingensis (strain ATCC 700844

Query: 4 RGPPAA 9
RGPPAA
Sbjct: 66 RGPPAA 71


>sp|RADB_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 5 GPPAAG 10
GPPAAG
Sbjct: 33 GPPAAG 38


>sp|RADB_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 5 GPPAAG 10
GPPAAG
Sbjct: 33 GPPAAG 38


>sp|HIS5_ARCFU|IMIDAZOLE glycerol phosphate synthase subunit|Archaeoglobus fulgidus (strain

Query: 2 VVRGPPAAG 10
VVR PP+ G
Sbjct: 100 VVRFPPSVG 108


>sp|GLCDH_HALMT|GLUCOSE 1-dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 2 VVRGPPAAG 10
VR PPA+G
Sbjct: 86 TVRRPPASG 94




12|Sequence|56|65|PPAAGAFKER

>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PPAAGAFKE 9
PP G FKE
Sbjct: 73 PPKKGGFKE 81


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PPAAGAFKER 10
P AAGAF+ R
Sbjct: 350 PSAAGAFRLR 359


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain

Query: 2 PAAGAFKER 10
P AGA KE+
Sbjct: 49 PEAGASKEK 57


>sp|AMPPA_HYPBU|AMP phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 1 PPAAGAFKER 10
PP+ AFK+R
Sbjct: 86 PPSFDAFKKR 95




13|Sequence|61|70|AFKERPTKPT

>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FKERPTKPT 10
FK RPT P+
Sbjct: 514 FKSRPTNPS 522


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 FKERPTKP 9
FK RPT+P
Sbjct: 507 FKSRPTRP 514


>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FKERPTKP 9
FK RP KP
Sbjct: 512 FKSRPNKP 519


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 2 FKERPTKPT 10
FK RPT+P+
Sbjct: 501 FKSRPTRPS 509


>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FKERPTKP 9
FK RP KP
Sbjct: 516 FKSRPNKP 523


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 FKERPTKP 9
F+ RPT+P
Sbjct: 500 FRSRPTRP 507


>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 2 FKERPTKP 9
FKERP+ P
Sbjct: 117 FKERPSDP 124


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FKERPTKPT 10
F+ RPT P+
Sbjct: 501 FRSRPTSPS 509


>sp|PYRG_META3|CTP synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FKERPTKP 9
FK RP KP
Sbjct: 517 FKSRPNKP 524


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FKERPTKP 9
FK RP KP
Sbjct: 507 FKSRPAKP 514


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 FKERPTKPT 10
FK RP P+
Sbjct: 499 FKSRPLNPS 507


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FKERPTKPT 10
F+ PTKP+
Sbjct: 501 FRSSPTKPS 509


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 FKERPTKPT 10
+ +RP KPT
Sbjct: 517 YGDRPIKPT 525


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 FKERPTKP 9
FK RP KP
Sbjct: 508 FKSRPMKP 515


>sp|THIC_THEKO|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KERPTK 8
KERPTK
Sbjct: 398 KERPTK 403


>sp|THIC_THEGJ|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 KERPTK 8
KERPTK
Sbjct: 398 KERPTK 403


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 KERPTK 8
KERPTK
Sbjct: 398 KERPTK 403


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FKERPTKPT 10
FK RP P+
Sbjct: 503 FKSRPLNPS 511


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 FKERPTKPT 10
F+ERP++P
Sbjct: 118 FEERPSEPI 126


>sp|THIC_PYRFU|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KERPTK 8
KERPTK
Sbjct: 398 KERPTK 403


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 4 ERPTKPT 10
+RP KPT
Sbjct: 518 DRPVKPT 524


>sp|PYRG_THEKO|CTP synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FKERPTKP 9
FK RP +P
Sbjct: 508 FKSRPMRP 515


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FKERPTKP 9
FK RP +P
Sbjct: 508 FKSRPMRP 515


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FKERPTKP 9
FK RP +P
Sbjct: 508 FKSRPMRP 515


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 4 ERPTKPT 10
+RP KPT
Sbjct: 518 DRPIKPT 524


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 4 ERPTKPT 10
+RP KPT
Sbjct: 517 DRPIKPT 523




14|Sequence|66|75|PTKPTAFRKF

>sp|PYRE_HYPBU|OROTATE phosphoribosyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 PTKPTAFRK 9
P+KP FR+
Sbjct: 41 PSKPQLFRR 49


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 KPTAFRKF 10
KP A RKF
Sbjct: 378 KPEAIRKF 385


>sp|SYE_NITMS|GLUTAMATE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 KPTAFRKF 10
KP A RKF
Sbjct: 369 KPEAIRKF 376


>sp|EF1A_PYRIL|ELONGATION factor 1-alpha|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PTKPTAFRK 9
P KPTA +K
Sbjct: 7 PPKPTALQK 15


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PTKPTAFRK 9
P KPTA +K
Sbjct: 7 PPKPTALQK 15


>sp|EF1A_PYRAE|ELONGATION factor 1-alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PTKPTAFRK 9
P KPTA +K
Sbjct: 7 PPKPTALQK 15


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PTKPTAFRK 9
P KPTA +K
Sbjct: 7 PPKPTALQK 15




15|Sequence|71|80|AFRKFYERGD

>sp|LEUC_METB6|3-ISOPROPYLMALATE dehydratase large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 AFRKFYERG 9
A RKFYE G
Sbjct: 41 AIRKFYEMG 49


>sp|DNAG_METJA|DNA primase DnaG|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FRKFYER 8
+RKFYE+
Sbjct: 335 YRKFYEK 341


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 AFRKFYERG 9
AF K YE+G
Sbjct: 153 AFLKMYEKG 161


>sp|COXX2_NATPD|PROTOHEME IX farnesyltransferase 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AFRKFYERGD 10
A+R Y RGD
Sbjct: 331 AYRDDYARGD 340


>sp|HIS4_METTH|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermobacter

Query: 3 RKFYERG 9
RKF ERG
Sbjct: 153 RKFQERG 159


>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 1 AFRKFYERGD 10
A R+FY+R D
Sbjct: 258 AVRQFYKRSD 267


>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 RKFYERGD 10
R+F+ RGD
Sbjct: 361 RRFFYRGD 368


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 2 FRKFYERG 9
F KFYE G
Sbjct: 698 FNKFYEGG 705


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 FRKFYER 8
RKFYE+
Sbjct: 252 LRKFYEK 258


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FRKFYERG 9
RK+YE G
Sbjct: 260 LRKYYEEG 267


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 2 FRKFYE 7
FRKF+E
Sbjct: 196 FRKFFE 201


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 AFRKFYERGD 10
A K YERG+
Sbjct: 418 AVLKLYERGN 427


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 FRKFYE 7
FRKF+E
Sbjct: 196 FRKFFE 201


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 2 FRKFYE 7
FRKF+E
Sbjct: 196 FRKFFE 201


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 2 FRKFYE 7
FRKF+E
Sbjct: 196 FRKFFE 201


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 2 FRKFYE 7
FRKF+E
Sbjct: 196 FRKFFE 201


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 FRKFYE 7
FRKF+E
Sbjct: 196 FRKFFE 201


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 FRKFYE 7
FRKF+E
Sbjct: 196 FRKFFE 201


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 2 FRKFYE 7
FRKF+E
Sbjct: 199 FRKFFE 204


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC

Query: 2 FRKFYERGD 10
R++YE+G+
Sbjct: 23 LREYYEKGE 31


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FRKFYE 7
FRKF+E
Sbjct: 198 FRKFFE 203


>sp|PHNC2_NATPD|PHOSPHONATES import ATP-binding protein PhnC|Natronomonas pharaonis (strain

Query: 1 AFRKFYERGD 10
+ RK Y+ GD
Sbjct: 6 SLRKVYDSGD 15


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AFRKFYERGD 10
A K YERG+
Sbjct: 418 AVLKIYERGN 427


>sp|AGL14_HALVD|PROBABLE low-salt glycan biosynthesis reductase|Haloferax volcanii (strain

Query: 5 FYERGD 10
FYE GD
Sbjct: 122 FYEEGD 127


>sp|G1PDH_ARCFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KFYERGD 10
K+Y RGD
Sbjct: 280 KYYGRGD 286


>sp|AROB_SACS2|3-DEHYDROQUINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FRKFYERGD 10
F K ++RGD
Sbjct: 79 FEKNFDRGD 87


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 4 KFYERG 9
+FYERG
Sbjct: 367 EFYERG 372


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 1 AFRKFYERGD 10
AF+ FY+ D
Sbjct: 224 AFKTFYDEQD 233


>sp|ASD_METJA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanocaldococcus

Query: 4 KFYERGD 10
KFYE G+
Sbjct: 49 KFYENGN 55




16|Sequence|76|85|YERGDFPIAL

>sp|COXX_HALSA|PROTOHEME IX farnesyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YERGDFPI 8
YERG FP+
Sbjct: 345 YERGGFPL 352


>sp|COXX_HALS3|PROTOHEME IX farnesyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YERGDFPI 8
YERG FP+
Sbjct: 362 YERGGFPL 369


>sp|COXX_HALWD|PROTOHEME IX farnesyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 YERGDFPI 8
YERG FP+
Sbjct: 382 YERGGFPM 389


>sp|COXX1_NATPD|PROTOHEME IX farnesyltransferase 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YERGDFPI 8
YERG FP+
Sbjct: 357 YERGGFPM 364


>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YERGDFPIAL 10
++RGD+ IAL
Sbjct: 82 FDRGDYVIAL 91


>sp|COXX2_NATPD|PROTOHEME IX farnesyltransferase 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YERGDFPI 8
Y RGD+P+
Sbjct: 336 YARGDYPM 343


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YERGDFPIAL 10
Y RGDF I L
Sbjct: 96 YARGDFYIPL 105


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 2 ERGDFPIAL 10
+R DFPI L
Sbjct: 96 KRSDFPIKL 104


>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 YERGDFPIAL 10
+ER DFP +
Sbjct: 41 HERSDFPAGM 50


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YERGDFPI 8
YE+GDF +
Sbjct: 391 YEKGDFDV 398


>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ERGDFPIA 9
E GD PIA
Sbjct: 358 ESGDVPIA 365


>sp|RRP41_METMA|EXOSOME complex component Rrp41|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YERGDFPIAL 10
Y DFP+A+
Sbjct: 182 YGEADFPVAM 191


>sp|METXA_HALVD|HOMOSERINE O-acetyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 YERGDFPIA 9
+ RGD P+A
Sbjct: 344 FRRGDVPVA 352


>sp|DAPAL_PYRFU|UNCHARACTERIZED DapA-like lyase PF0657|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ERGDFPIAL 10
ER D PI L
Sbjct: 122 ERADIPIIL 130


>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YERGDFPI 8
YE G FP+
Sbjct: 366 YEAGGFPM 373


>sp|HYD2G_PYRFU|SULFHYDROGENASE 2 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GDFPIAL 10
G+FPI+L
Sbjct: 53 GEFPISL 59


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC

Query: 1 YERGDFPI 8
YE+G+F I
Sbjct: 27 YEKGEFSI 34


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 YERGDFPI 8
+E+GDF I
Sbjct: 187 FEKGDFDI 194


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ERGDFPI 8
ERGDF +
Sbjct: 179 ERGDFDV 185




17|Sequence|81|90|FPIALEHDSK

>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 PIALEHDS 9
PI++E+DS
Sbjct: 396 PISVEYDS 403


>sp|KPTA_THEON|PROBABLE RNA 2'-phosphotransferase|Thermococcus onnurineus (strain NA1)

Query: 1 FPIALEHD 8
FP++L+H+
Sbjct: 81 FPVSLDHE 88


>sp|KPTA_THEKO|PROBABLE RNA 2'-phosphotransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 FPIALEHD 8
FP++L+H+
Sbjct: 81 FPVSLDHE 88


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PIALEHDSK 10
P+++E+DS+
Sbjct: 494 PVSMENDSE 502


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 PIALEHDS 9
P+ALE+D+
Sbjct: 230 PLALEYDN 237




18|Sequence|86|95|EHDSKGNKIA

>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 HDSKGNKIA 10
+DSKGN +A
Sbjct: 973 YDSKGNLVA 981


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 HDSKGNKI 9
+DSKGN++
Sbjct: 271 YDSKGNEV 278


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DSKGNKIA 10
DS+G KIA
Sbjct: 780 DSEGEKIA 787


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HDSKGNKI 9
H SKGN I
Sbjct: 535 HKSKGNVI 542


>sp|MCRB_METVO|METHYL-COENZYME M reductase subunit beta|Methanococcus voltae

Query: 3 DSKGNKIA 10
D+KGN++A
Sbjct: 12 DAKGNQVA 19


>sp|CAS1A_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DSKGNKIA 10
D+KGN +A
Sbjct: 66 DAKGNPVA 73


>sp|RL1_PYRAR|LARGE ribosomal subunit protein uL1|Pyrobaculum arsenaticum (strain DSM

Query: 2 HDSKGNKIA 10
H K NKIA
Sbjct: 56 HPPKANKIA 64


>sp|VHUU_METJA|F420-NON-REDUCING hydrogenase vhu subunit U|Methanocaldococcus jannaschii (strain

Query: 3 DSKGNKI 9
D KGNKI
Sbjct: 38 DEKGNKI 44


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EHDSKGNKI 9
+H+ +GN+I
Sbjct: 432 DHEDRGNRI 440




19|Sequence|91|100|GNKIAWKVEI

>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 GNKIAWKVE 9
G K+AWKVE
Sbjct: 233 GGKLAWKVE 241


>sp|SYK_CENSM|LYSINE--TRNA ligase|Cenarchaeum symbiosum

Query: 1 GNKIAWKVE 9
G K+AWKVE
Sbjct: 232 GGKLAWKVE 240


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 GNKIAWKVE 9
G+ IAWK+E
Sbjct: 360 GHSIAWKLE 368


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 GNKIAWKVE 9
G+ IAWK+E
Sbjct: 360 GHSIAWKLE 368


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNKIAWKVE 9
GNK+AW+ E
Sbjct: 360 GNKLAWEKE 368


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 GNKIAWKV 8
G KIAW V
Sbjct: 757 GEKIAWDV 764


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 GNKIAWKVE 9
G+++AWK+E
Sbjct: 360 GHELAWKLE 368


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GNKIAWKVE 9
G+ +AWK+E
Sbjct: 360 GHPVAWKLE 368


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 2 NKIAWKVEI 10
N IAW +EI
Sbjct: 57 NPIAWMIEI 65


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GNKIAWKV 8
G KIAW +
Sbjct: 759 GEKIAWDI 766


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GNKIAWK 7
GN+I WK
Sbjct: 155 GNEIYWK 161


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 NKIAWKVEI 10
N+I W+ EI
Sbjct: 19 NEILWRAEI 27


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GNKIAWKVE 9
G KIAW ++
Sbjct: 636 GEKIAWDLK 644


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GNKIAWKV 8
G KIAW +
Sbjct: 748 GEKIAWDI 755


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 GNKIAWKV 8
G KIAW +
Sbjct: 776 GEKIAWDI 783


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GNKIAWKVE 9
G K+ W+V+
Sbjct: 211 GGKLTWRVD 219


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GNKIAWKVE 9
G K+ W+V+
Sbjct: 207 GGKLTWRVD 215


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GNKIAWKV 8
G KIAW +
Sbjct: 779 GEKIAWDI 786


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 GNKIAWKVE 9
G K+ W+V+
Sbjct: 211 GGKLTWRVD 219


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNKIAWKV 8
G KIAW +
Sbjct: 776 GEKIAWDI 783


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GNKIAWKVE 9
G K+ W+V+
Sbjct: 211 GGKLTWRVD 219


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GNKIAWKV 8
G KIAW +
Sbjct: 763 GEKIAWDL 770


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 KIAWKVE 9
K+ WK+E
Sbjct: 239 KLGWKIE 245


>sp|SURE_CALMQ|5'-NUCLEOTIDASE SurE|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GNKIAWK 7
GNKI W+
Sbjct: 210 GNKIYWR 216


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 GNKIAWKVEI 10
G KI W V +
Sbjct: 799 GEKIGWDVAL 808


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GNKIAWKVE 9
G K+ W+V+
Sbjct: 205 GGKLTWRVD 213


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GNKIAWKV 8
G KIAW +
Sbjct: 777 GEKIAWDI 784


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 NKIAWKVEI 10
N+IAW V++
Sbjct: 272 NEIAWDVKL 280


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NKIAWKVEI 10
N+IAW V++
Sbjct: 272 NEIAWDVKL 280


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NKIAWKVEI 10
N+IAW V++
Sbjct: 272 NEIAWDVKL 280


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GNKIAWKV 8
G K+AW++
Sbjct: 375 GQKVAWEI 382


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 NKIAWKVEI 10
N+IAW V++
Sbjct: 272 NEIAWDVKL 280


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 NKIAWKVEI 10
N+IAW V++
Sbjct: 272 NEIAWDVKL 280


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NKIAWKVEI 10
N+IAW V++
Sbjct: 272 NEIAWDVKL 280


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NKIAWKVEI 10
N+IAW V++
Sbjct: 272 NEIAWDVKL 280




20|Sequence|96|105|WKVEIEKLDY

>sp|Y1880_ARCFU|UNCHARACTERIZED protein AF_1880|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KVEIEKLDY 10
K+EIE LDY
Sbjct: 18 KMEIESLDY 26


>sp|Y1001_ARCFU|UNCHARACTERIZED protein AF_1001|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WKVEIEKLDY 10
W+ E+E +DY
Sbjct: 167 WEYEVETVDY 176


>sp|CSG_HALVD|CELL surface glycoprotein|Haloferax volcanii (strain ATCC 29605

Query: 1 WKVEIEKLDY 10
W VEI+ D+
Sbjct: 722 WMVEIDTTDF 731


>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KVEIEKLDY 10
K+ IE++DY
Sbjct: 326 KLSIERIDY 334


>sp|RPO1C_METAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina acetivorans (strain

Query: 1 WKVEIEKLDY 10
W++E K+D+
Sbjct: 135 WEIEATKIDH 144


>sp|RAD50_SULAC|DNA double-strand break repair Rad50|Sulfolobus acidocaldarius (strain

Query: 1 WKVEIEKLDY 10
K EIEKL+Y
Sbjct: 372 QKNEIEKLNY 381


>sp|Y089_SULAC|MEMO1 family protein Saci_0089|Sulfolobus acidocaldarius (strain ATCC

Query: 4 EIEKLDY 10
EI+KLDY
Sbjct: 216 EIQKLDY 222


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 1 WKVEIEKLDY 10
W++E K+D+
Sbjct: 138 WEIEATKIDH 147


>sp|KHSE_THEKO|HOMOSERINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WKVEIEKLD 9
W++E+E D
Sbjct: 38 WEIEVEGYD 46


>sp|Y045_METJA|UNCHARACTERIZED protein MJ0045|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WKVEIEKLDY 10
+K IEK DY
Sbjct: 198 YKARIEKTDY 207


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 VEIEKLD 9
VE+EKLD
Sbjct: 77 VELEKLD 83


>sp|PSTK_METMP|L-SERYL-TRNA(SEC) kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KVEIEKLDY 10
K+E EKLD+
Sbjct: 231 KIESEKLDF 239


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 WKVEIEKLDY 10
WK E LDY
Sbjct: 170 WKDECIDLDY 179


>sp|DNAG_METMJ|DNA primase DnaG|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 VEIEKLDY 10
+ IEKL+Y
Sbjct: 148 IRIEKLEY 155


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KVEIEKL 8
KVEIEKL
Sbjct: 63 KVEIEKL 69


>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VEIEKLDY 10
VE+EK D+
Sbjct: 164 VEVEKFDF 171


>sp|FLPA_SACI7|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 WKVEIEKLD 9
+K E+EKL+
Sbjct: 196 YKAEVEKLE 204


>sp|FLPA_SACI6|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 WKVEIEKLD 9
+K E+EKL+
Sbjct: 196 YKAEVEKLE 204


>sp|FLPA_SACI4|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 WKVEIEKLD 9
+K E+EKL+
Sbjct: 196 YKAEVEKLE 204


>sp|FLPA_SACI3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 WKVEIEKLD 9
+K E+EKL+
Sbjct: 196 YKAEVEKLE 204


>sp|FLPA_SACI2|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 WKVEIEKLD 9
+K E+EKL+
Sbjct: 196 YKAEVEKLE 204


>sp|FLPA_SACI1|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 WKVEIEKLD 9
+K E+EKL+
Sbjct: 196 YKAEVEKLE 204


>sp|FLPA_SACS2|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus solfataricus (strain

Query: 1 WKVEIEKLD 9
+K E+EKL+
Sbjct: 196 YKTEVEKLE 204


>sp|ACYP_SACS2|ACYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 3 VEIEKLDY 10
E+EK+DY
Sbjct: 79 AEVEKVDY 86




21|Sequence|101|110|EKLDYHHYLP

>sp|Y2310_ARCFU|MEMO1 family protein AF_2310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DYHHYLP 10
D HHYLP
Sbjct: 174 DMHHYLP 180


>sp|CSG_METBF|MAJOR S-layer protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 EKLDYHHYLP 10
+K+DY +Y P
Sbjct: 96 QKVDYEYYKP 105


>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 4 DYHHYLP 10
DYH Y+P
Sbjct: 219 DYHVYIP 225


>sp|GATE_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 1 EKLDYHHYLP 10
EK+ Y YLP
Sbjct: 471 EKIAYSKYLP 480


>sp|GATE_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 1 EKLDYHHYLP 10
EK+ Y YLP
Sbjct: 471 EKVAYSRYLP 480


>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 3 LDYHHYL 9
LDYH Y+
Sbjct: 185 LDYHGYI 191


>sp|CBIG_METJA|PROBABLE cobalt-precorrin-5A hydrolase|Methanocaldococcus jannaschii

Query: 3 LDYHHY 8
LDY+HY
Sbjct: 23 LDYYHY 28


>sp|PELO_METPE|PROTEIN pelota homolog|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 EKLDYHHY 8
EK+++H Y
Sbjct: 70 EKVEFHQY 77


>sp|HEM1_SULAC|GLUTAMYL-TRNA reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 YHHYLP 10
Y HY+P
Sbjct: 27 YEHYIP 32


>sp|PELO_PYRCJ|PROTEIN pelota homolog|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EKLDYHHY 8
EK++YH +
Sbjct: 63 EKIEYHKF 70


>sp|TRPB_METLZ|TRYPTOPHAN synthase beta chain|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EKLDYHHYL 9
+ +DY HYL
Sbjct: 178 KTVDYTHYL 186


>sp|GCSPA_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 5 YHHYLP 10
Y HY+P
Sbjct: 75 YEHYVP 80


>sp|GCSPA_HALS3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 5 YHHYLP 10
Y HY+P
Sbjct: 75 YEHYVP 80


>sp|PELO_METST|PROTEIN pelota homolog|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EKLDYHHY 8
EK+++H Y
Sbjct: 69 EKINFHKY 76


>sp|RL6_THEVO|LARGE ribosomal subunit protein uL6|Thermoplasma volcanium (strain ATCC

Query: 2 KLDYHHY 8
K+DY H+
Sbjct: 90 KIDYSHF 96


>sp|RL6_THEAC|LARGE ribosomal subunit protein uL6|Thermoplasma acidophilum (strain

Query: 2 KLDYHHY 8
K+DY H+
Sbjct: 90 KIDYSHF 96


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 4 DYHHYLP 10
D+H Y P
Sbjct: 229 DFHEYYP 235




22|Sequence|106|115|HHYLPLFFDG

>sp|Y2030_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 3 YLPLFFD 9
YLP FFD
Sbjct: 364 YLPQFFD 370


>sp|Y1893_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 3 YLPLFFD 9
YLP FFD
Sbjct: 364 YLPQFFD 370


>sp|PIMT_PYRIL|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 LPLFFDG 10
LPLFFD
Sbjct: 47 LPLFFDA 53


>sp|GCH1_HYPBU|GTP cyclohydrolase 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 HHYLPLF 7
HH LP F
Sbjct: 75 HHLLPFF 81


>sp|Y678_METJA|UNCHARACTERIZED protein MJ0678|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HYLPLFFD 9
HYLP+ D
Sbjct: 185 HYLPISLD 192


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 2 HYLPLFF 8
HYL +FF
Sbjct: 319 HYLSVFF 325


>sp|NDK_THEAC|NUCLEOSIDE diphosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HYLPLFFD 9
H +P+FF+
Sbjct: 126 HEMPIFFN 133


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 1 HHYLPLFFDG 10
H YL L DG
Sbjct: 105 HPYLSLLVDG 114


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HHYLPLFFD 9
H++ PLF++
Sbjct: 40 HNFPPLFYE 48


>sp|NDK_THEVO|NUCLEOSIDE diphosphate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HHYLPLFF 8
+H +P+FF
Sbjct: 124 NHEMPIFF 131


>sp|PUR5_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HHYLPLFFDG 10
HH +P F G
Sbjct: 311 HHNIPAFVIG 320


>sp|PUR5_METM6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C6 /

Query: 1 HHYLPLFFDG 10
HH +P F G
Sbjct: 311 HHNIPAFVIG 320


>sp|PUR5_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C5 /

Query: 1 HHYLPLFFDG 10
HH +P F G
Sbjct: 311 HHNIPAFVIG 320


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HHYLPLFFD 9
H YL +F D
Sbjct: 199 HDYLRIFID 207


>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 1 HHYLPLFFDG 10
H Y P++ +G
Sbjct: 250 HKYAPIYKEG 259




23|Sequence|111|120|LFFDGLCEMT

>sp|RNH_SULTO|RIBONUCLEASE HI|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FFDGLCE 8
+FDGLCE
Sbjct: 5 YFDGLCE 11


>sp|PGP_METMJ|PHOSPHOGLYCOLATE phosphatase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FFDGLCEM 9
F DGLC+M
Sbjct: 48 FMDGLCKM 55


>sp|Y1404_METJA|UNCHARACTERIZED protein MJ1404|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FFDGLCEM 9
F D +CEM
Sbjct: 87 FLDAVCEM 94


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 3 FDGLCE 8
DGLCE
Sbjct: 348 LDGLCE 353


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 FDGLCEM 9
FD LCE+
Sbjct: 203 FDDLCEI 209




24|Sequence|116|125|LCEMTFPYEF

>sp|RLMH_METTP|PUTATIVE ribosomal RNA large subunit|Methanothrix thermoacetophila (strain

Query: 1 LCEMTFPYE 9
L +MTFPY+
Sbjct: 113 LSKMTFPYQ 121


>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 3 EMTFPYEF 10
+MT+PY F
Sbjct: 275 KMTYPYTF 282


>sp|RGYRB_NANEQ|REVERSE gyrse subunit B|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 CEMTFPYE 9
CE +PYE
Sbjct: 27 CENDYPYE 34


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LCEMTFPYEF 10
L E FPY+F
Sbjct: 551 LWEKLFPYDF 560


>sp|MCRD_METFE|METHYL-COENZYME M reductase operon protein|Methanothermus fervidus

Query: 1 LCEMTFPYEF 10
+C+ FP+++
Sbjct: 82 VCDEVFPFKY 91


>sp|TIAS_METJA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocaldococcus jannaschii

Query: 5 TFPYEF 10
TFPY F
Sbjct: 194 TFPYTF 199


>sp|ACDG_METKA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanopyrus kandleri

Query: 5 TFPYEF 10
TFPY F
Sbjct: 271 TFPYAF 276


>sp|SLAB_ACIAM|S-LAYER protein B|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 LCEMTFPYEF 10
L E+T PY +
Sbjct: 182 LAELTVPYVY 191




25|Sequence|121|130|FPYEFFARQG

>sp|SYP_CALMQ|PROLINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 PYEFFARQ 9
PYEFF+++
Sbjct: 76 PYEFFSKE 83


>sp|SYP_PYRIL|PROLINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PYEFFARQ 9
PYEFF+++
Sbjct: 79 PYEFFSKE 86


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PYEFFARQ 9
PYEFF ++
Sbjct: 79 PYEFFGKE 86


>sp|SYP_PYRNV|PROLINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PYEFFARQ 9
PYEFF ++
Sbjct: 78 PYEFFGKE 85


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PYEFFARQ 9
PYEFF ++
Sbjct: 79 PYEFFGKE 86


>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PYEFFARQ 9
PYEFF ++
Sbjct: 79 PYEFFGKE 86


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 FPYEFFAR 8
+PY FF R
Sbjct: 436 YPYNFFFR 443


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 3 YEFFARQG 10
+EFF R G
Sbjct: 182 WEFFGRSG 189


>sp|AROB_PYRCJ|3-DEHYDROQUINATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 YEFFARQG 10
Y+F A QG
Sbjct: 65 YQFLAEQG 72


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PYEFFARQG 10
PY FFA+
Sbjct: 30 PYPFFAKSA 38


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FPYEFFARQ 9
+ YEFF ++
Sbjct: 164 YAYEFFTKE 172


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PYEFFARQG 10
PY FF +G
Sbjct: 30 PYPFFIERG 38


>sp|TRPE_AERPE|ANTHRANILATE synthase component 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 PYEFFARQG 10
PY ++AR G
Sbjct: 220 PYLYYARLG 228


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 FPYEFFARQ 9
+ YEFF R+
Sbjct: 164 YAYEFFTRE 172




26|Sequence|126|135|FARQGIHDML

>sp|UPPP_SACS2|UNDECAPRENYL-DIPHOSPHATASE solfataricus (strain ATCC 35092

Query: 1 FARQGIHDM 9
F R+G+HD+
Sbjct: 139 FPRKGLHDL 147


>sp|FAU1_SULTO|PROBABLE ribonuclease FAU-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FARQGIHDML 10
F+R+GI+D L
Sbjct: 303 FSREGIYDGL 312


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 4 QGIHDML 10
QG+HD+L
Sbjct: 77 QGLHDLL 83


>sp|UPPP_SACI4|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain M.14.25 /

Query: 2 ARQGIHDM 9
+R+G+HD+
Sbjct: 140 SRKGLHDL 147


>sp|UPPP_SACI6|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain M.16.4 /

Query: 3 RQGIHDM 9
R+G+HD+
Sbjct: 141 RKGLHDL 147


>sp|SRP54_AERPE|SIGNAL recognition particle 54 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 2 ARQGIHDML 10
AR+G+ D+L
Sbjct: 166 ARRGLEDLL 174


>sp|NEP1_PYRAR|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum arsenaticum (strain

Query: 3 RQGIHDML 10
RQG+ D+L
Sbjct: 133 RQGLRDLL 140




27|Sequence|131|140|IHDMLEHGGN

>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IHDMLEHGG 9
+ DM EHGG
Sbjct: 288 VRDMHEHGG 296


>sp|OGT_THEKO|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IHDMLEHGG 9
IHD+ EH G
Sbjct: 40 IHDLAEHLG 48


>sp|FLPA_METHJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanospirillum hungatei JF-1

Query: 3 DMLEHGG 9
++LEHGG
Sbjct: 168 NLLEHGG 174


>sp|Y1425_THEVO|PUTATIVE ankyrin repeat protein TV1425|Thermoplasma volcanium (strain ATCC

Query: 4 MLEHGGN 10
+LEHG N
Sbjct: 117 LLEHGAN 123


>sp|RRP42_THEKO|EXOSOME complex component Rrp42|Thermococcus kodakarensis (strain ATCC

Query: 4 MLEHGGN 10
+L+HGGN
Sbjct: 142 VLDHGGN 148


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IHDMLEHGGN 10
+H +LE+GG+
Sbjct: 234 LHMVLEYGGS 243


>sp|RL10E_METHJ|LARGE ribosomal subunit protein uL16|Methanospirillum hungatei JF-1

Query: 1 IHDMLEHGGN 10
I D L HGG+
Sbjct: 145 IKDALRHGGH 154


>sp|CHEB_HALSA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Halobacterium

Query: 1 IHDMLEHGG 9
I D+LE GG
Sbjct: 17 ISDILEDGG 25


>sp|CHEB_HALS3|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Halobacterium

Query: 1 IHDMLEHGG 9
I D+LE GG
Sbjct: 17 ISDILEDGG 25


>sp|G1PDH_THEAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma acidophilum (strain ATCC

Query: 2 HDMLEH 7
HD+LEH
Sbjct: 19 HDVLEH 24


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 2 HDMLEHG 8
HD EHG
Sbjct: 74 HDSREHG 80


>sp|GCS2_HALSA|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 MLEHGG 9
M+EHGG
Sbjct: 212 MVEHGG 217


>sp|GCS2_HALS3|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 MLEHGG 9
M+EHGG
Sbjct: 212 MVEHGG 217




28|Sequence|136|145|EHGGNKILPV

>sp|Y916_METST|UPF0425 pyridoxal phosphate-dependent protein Msp_0916|Methanosphaera

Query: 3 GGNKILPV 10
GG KILPV
Sbjct: 72 GGEKILPV 79


>sp|RRP41_METTH|EXOSOME complex component Rrp41|Methanothermobacter thermautotrophicus

Query: 1 EHGGNKIL 8
E GGNKIL
Sbjct: 46 EFGGNKIL 53


>sp|HEM1_THEVO|GLUTAMYL-TRNA reductase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EHGGNKILPV 10
++GGNKIL V
Sbjct: 155 KNGGNKILLV 164


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 4 GNKILPV 10
GNK++PV
Sbjct: 46 GNKVIPV 52


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 4 GNKILPV 10
GNK++PV
Sbjct: 46 GNKVIPV 52


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 4 GNKILPV 10
GNK++PV
Sbjct: 46 GNKVIPV 52


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 4 GNKILPV 10
GNK++PV
Sbjct: 46 GNKVIPV 52


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 4 GNKILPV 10
GNK++PV
Sbjct: 46 GNKVIPV 52


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 4 GNKILPV 10
GNK++PV
Sbjct: 46 GNKVIPV 52


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 EHGGNKILPV 10
EH G K+ PV
Sbjct: 210 EHNGEKLKPV 219


>sp|RTCA_METKA|RNA 3'-terminal phosphate cyclase|Methanopyrus kandleri (strain AV19 /

Query: 1 EHGGNKILP 9
EH G++ILP
Sbjct: 291 EHMGDQILP 299


>sp|PYRH_HALWD|URIDYLATE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EHGGNKILP 9
EH G I+P
Sbjct: 218 EHNGTDIIP 226


>sp|RRP41_THEAC|EXOSOME complex component Rrp41|Thermoplasma acidophilum (strain ATCC

Query: 1 EHGGNKIL 8
E GGNKI+
Sbjct: 47 EWGGNKIM 54


>sp|UPP_SACI6|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EHGGNKIL 8
E+G NKIL
Sbjct: 173 EYGANKIL 180


>sp|UPP_SACI7|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 EHGGNKIL 8
E+G NKIL
Sbjct: 173 EYGANKIL 180


>sp|UPP_SACI4|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 1 EHGGNKIL 8
E+G NKIL
Sbjct: 173 EYGANKIL 180


>sp|UPP_SACI3|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 EHGGNKIL 8
E+G NKIL
Sbjct: 173 EYGANKIL 180


>sp|UPP_SACI2|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 EHGGNKIL 8
E+G NKIL
Sbjct: 173 EYGANKIL 180


>sp|UPP_SACI1|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 EHGGNKIL 8
E+G NKIL
Sbjct: 173 EYGANKIL 180


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EHGGNKILP 9
E GN+ILP
Sbjct: 434 EDRGNRILP 442


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GGNKILPV 10
G N ILPV
Sbjct: 106 GANAILPV 113


>sp|RRP41_THEVO|EXOSOME complex component Rrp41|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EHGGNKIL 8
E GGNKI+
Sbjct: 47 EWGGNKII 54


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 1 EHGGNKILPV 10
EHG K +PV
Sbjct: 474 EHGLKKDIPV 483


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EHGGNKILPV 10
E+GG I+PV
Sbjct: 207 ENGGKVIIPV 216


>sp|Y045_METJA|UNCHARACTERIZED protein MJ0045|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GGNKIL 8
GGNK+L
Sbjct: 212 GGNKVL 217


>sp|ARFB_METTH|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter thermautotrophicus

Query: 2 HGGNKI 7
HGGNK+
Sbjct: 111 HGGNKL 116


>sp|Y1370_METJA|UPF0285 protein MJ1370|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GGNKILPV 10
G NKILP+
Sbjct: 63 GINKILPI 70


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 EHGGN 5
EHGGN
Sbjct: 286 EHGGN 290




29|Sequence|141|150|KILPVLPQLI

>sp|ECFA1_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 3 LPVLPQLI 10
LP+LP+LI
Sbjct: 239 LPILPKLI 246


>sp|GLMS_PYRFU|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus furiosus (strain ATCC

Query: 2 ILPVLPQLI 10
ILP LP++I
Sbjct: 428 ILPRLPEII 436


>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LPVLPQL 9
LPV+P+L
Sbjct: 540 LPVIPEL 546


>sp|Y1317_METJA|UNCHARACTERIZED MFS-type transporter MJ1317|Methanocaldococcus jannaschii (strain

Query: 2 ILPVLPQLI 10
I+P+LP LI
Sbjct: 41 IMPILPMLI 49


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LPVLPQL 9
LPV+P+L
Sbjct: 532 LPVIPEL 538


>sp|RS19_KORCO|SMALL ribosomal subunit protein uS19|Korarchaeum cryptofilum (strain

Query: 3 LPVLPQLI 10
+P+LP+++
Sbjct: 70 MPILPEMV 77


>sp|TMG10_METJA|TRNA (guanine(10)-N2)-dimethyltransferase|Methanocaldococcus jannaschii

Query: 1 KILPVLPQLI 10
KIL LP++I
Sbjct: 300 KILETLPEVI 309




30|Sequence|146|155|LPQLIIPIKN

>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PQLIIPIKN 10
P +++PI+N
Sbjct: 100 PSVVVPIRN 108


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 1 LPQLIIPIKN 10
LP +IP+KN
Sbjct: 290 LPSALIPVKN 299


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPQLIIPIKN 10
LPQL++P N
Sbjct: 264 LPQLVVPTYN 273


>sp|MVK_PYRFU|MEVALONATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPQLIIPI 8
+P+LI+PI
Sbjct: 213 MPELIVPI 220


>sp|QUEC_PYRAE|7-CYANO-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PQLIIPIKN 10
P +++PI+N
Sbjct: 103 PTVVVPIRN 111


>sp|CBID_METM7|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain C7 /

Query: 4 LIIPIKN 10
LIIPIKN
Sbjct: 50 LIIPIKN 56


>sp|PNPH_ARCFU|PROBABLE 6-oxopurine nucleoside phosphorylase|Archaeoglobus fulgidus

Query: 1 LPQLIIP 7
LP LIIP
Sbjct: 92 LPSLIIP 98


>sp|CBID_METMP|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 PQLIIPIKN 10
LIIPIKN
Sbjct: 48 DSLIIPIKN 56


>sp|CBID_METM6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 PQLIIPIKN 10
LIIPIKN
Sbjct: 48 DSLIIPIKN 56


>sp|CBID_METM5|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 PQLIIPIKN 10
LIIPIKN
Sbjct: 48 DSLIIPIKN 56


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LPQLIIPIKN 10
+P+L++ IKN
Sbjct: 281 VPELVLEIKN 290


>sp|SERK_STAMF|ATP-DEPENDENT L-serine kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 LPQLIIPIKN 10
LP+ +IP+K+
Sbjct: 11 LPKTVIPVKH 20


>sp|WTPA_PYRFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPQLIIP 7
+PQL+IP
Sbjct: 100 IPQLLIP 106


>sp|Y476_PYRFU|PROTEIN PF0476|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPQLIIPIKN 10
LP+ IP+KN
Sbjct: 128 LPKGAIPLKN 137


>sp|Y1110_METJA|UNCHARACTERIZED protein MJ1110|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPQLIIPIKN 10
LP+ IP+KN
Sbjct: 404 LPKYQIPLKN 413


>sp|RRP41_PYRFU|EXOSOME complex component Rrp41|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPQLIIPIKN 10
+P I+PIKN
Sbjct: 187 VPVAIMPIKN 196


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 5 IIPIKN 10
IIPIKN
Sbjct: 502 IIPIKN 507


>sp|RRP41_THEGJ|EXOSOME complex component Rrp41|Thermococcus gammatolerans (strain DSM

Query: 1 LPQLIIPIKN 10
+P I+P+KN
Sbjct: 187 VPVAIMPLKN 196


>sp|WTPA_PYRHO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LPQLIIP 7
+PQL+IP
Sbjct: 95 IPQLMIP 101




31|Sequence|151|160|IPIKNALNLR

>sp|DAPA_METPE|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IPIKNALNLR 10
IP+K A+NLR
Sbjct: 252 IPVKKAINLR 261


>sp|LYSZ_SULTO|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PIKNALNLR 10
PI NAL LR
Sbjct: 248 PISNALQLR 256


>sp|DAPA_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IPIKNALNL 9
+P+K ALN+
Sbjct: 255 VPVKEALNM 263


>sp|HPRT_METMA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 IPIKNALNLR 10
IP+ NAL+L+
Sbjct: 65 IPVANALSLK 74


>sp|HPRT_METAC|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 IPIKNALNLR 10
IP+ NAL+L+
Sbjct: 65 IPVANALSLK 74


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IPIKNALNL 9
+P++NA+NL
Sbjct: 305 LPVRNAVNL 313


>sp|HPRT_METBF|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IPIKNALNLR 10
IP+ NAL+L+
Sbjct: 66 IPVANALSLK 75


>sp|DAPA_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IPIKNALNL 9
+PIK A+NL
Sbjct: 247 VPIKTAMNL 255


>sp|DAPA_METBU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IPIKNALNL 9
+PIK A+NL
Sbjct: 249 VPIKRAMNL 257


>sp|DAPA_METJA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IPIKNALNL 9
IP+K ALN+
Sbjct: 248 IPVKTALNM 256


>sp|DAPA_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 IPIKNALNL 9
IPIK A+N+
Sbjct: 247 IPIKTAMNM 255


>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 1 IPIKNALNL 9
IPIK+ LNL
Sbjct: 150 IPIKDLLNL 158


>sp|DAPA_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 IPIKNALNL 9
IPIK A+N+
Sbjct: 247 IPIKTAMNM 255


>sp|DAPA_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 IPIKNALNL 9
IPIK A+N+
Sbjct: 247 IPIKTAMNM 255


>sp|GLNK2_HALMT|NITROGEN regulatory protein GlnK2|Haloferax mediterranei (strain ATCC 33500

Query: 1 IPIKNALNLR 10
+P++NA+ +R
Sbjct: 105 LPVENAIQVR 114


>sp|DAPA_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IPIKNALNL 9
IPIK A+N+
Sbjct: 247 IPIKTAMNM 255


>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IPIKNAL 7
IP++NAL
Sbjct: 260 IPVRNAL 266


>sp|DAPA_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IPIKNALNL 9
IPIK A+N+
Sbjct: 247 IPIKTAMNM 255




32|Sequence|156|165|ALNLRNRQVI

>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ALNLRNR 7
A+NLRNR
Sbjct: 34 AVNLRNR 40


>sp|Y1383_METJA|UNCHARACTERIZED protein MJ1383|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LNLRNRQVI 10
LNL+NR ++
Sbjct: 152 LNLKNRDIV 160




33|Sequence|161|170|NRQVICVTLK

***** No hits found ******


34|Sequence|166|175|CVTLKVLQHL

>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 TLKVLQHL 10
TLK+++HL
Sbjct: 214 TLKIIEHL 221


>sp|DNAG_SULTO|DNA primase DnaG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VTLKVLQHL 10
+T+K+ QH+
Sbjct: 305 ITIKIPQHI 313




35|Sequence|171|180|VLQHLVVSAE

>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus (strain

Query: 2 LQHLVVSAE 10
L H VVSAE
Sbjct: 321 LSHEVVSAE 329




36|Sequence|176|185|VVSAEMVGKA

>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VSAEMVGK 9
V+AEM+G+
Sbjct: 124 VAAEMIGR 131


>sp|RS19_METB6|SMALL ribosomal subunit protein uS19|Methanoregula boonei (strain DSM

Query: 1 VVSAEMVGKA 10
+V EM+GK+
Sbjct: 78 IVMPEMIGKS 87


>sp|RS19_ARCFU|SMALL ribosomal subunit protein uS19|Archaeoglobus fulgidus (strain

Query: 1 VVSAEMVGK 9
VV EMVGK
Sbjct: 72 VVLPEMVGK 80




37|Sequence|181|190|MVGKALVPYY

>sp|TRUA_METST|TRNA pseudouridine synthase A|Methanosphaera stadtmanae (strain ATCC

Query: 1 MVGKALVPY 9
++G+A VPY
Sbjct: 89 IIGEARVPY 97


>sp|Y315_THEKO|UPF0248 protein TK0315|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 MVGKALVPYY 10
VG+A +PY+
Sbjct: 53 FVGEAQIPYH 62


>sp|RS7_DESA1|SMALL ribosomal subunit protein uS7|Desulfurococcus amylolyticus

Query: 3 GKALVP 8
GKALVP
Sbjct: 56 GKALVP 61




38|Sequence|186|195|LVPYYRQILP

>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LVPYYRQILP 10
++ YYR++LP
Sbjct: 175 MIKYYREVLP 184


>sp|KHSE_THEVO|HOMOSERINE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LVPYYRQI 8
+ PYYR++
Sbjct: 233 IFPYYRRV 240


>sp|PSB_METAR|PROTEASOME subunit beta|Methanocella arvoryzae (strain DSM 22066

Query: 3 PYYRQIL 9
PYY Q+L
Sbjct: 103 PYYVQVL 109


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LVPYYRQI 8
LVPYY +
Sbjct: 519 LVPYYEDL 526


>sp|MALE_THELN|TREHALOSE/MALTOSE-BINDING protein MalE|Thermococcus litoralis (strain ATCC 51850

Query: 1 LVPYYRQI 8
+VPYY Q+
Sbjct: 406 IVPYYPQL 413


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LVPYYRQILP 10
+VPYY + +P
Sbjct: 233 IVPYYNREIP 242


>sp|RL22_METKA|LARGE ribosomal subunit protein uL22|Methanopyrus kandleri (strain AV19

Query: 2 VPYYRQILP 10
VP+ RQI P
Sbjct: 74 VPHRRQIRP 82


>sp|RL18_METMJ|LARGE ribosomal subunit protein uL18|Methanoculleus marisnigri (strain

Query: 2 VPYYRQILP 10
VPY ILP
Sbjct: 130 VPYGESILP 138




39|Sequence|191|200|RQILPVLNIF

>sp|GLPK2_SULAC|GLYCEROL kinase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RQILPVLNI 9
R+IL +LNI
Sbjct: 200 REILEILNI 208


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 1 RQILPVLNIF 10
R++ P+++IF
Sbjct: 141 RKLYPIIDIF 150


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 RQILPVLN 8
R+I+P++N
Sbjct: 43 REIVPIIN 50


>sp|Y1317_ARCFU|UNCHARACTERIZED protein AF_1317|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QILPVLN 8
Q+LP+LN
Sbjct: 116 QLLPILN 122




40|Sequence|196|205|VLNIFKNMNG

>sp|PTH_METM7|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain C7 /

Query: 1 VLNIFKNMN 9
+L IFKN+N
Sbjct: 63 LLEIFKNVN 71


>sp|PTH_METM6|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain C6 /

Query: 1 VLNIFKNMN 9
+L IFKN+N
Sbjct: 63 LLEIFKNVN 71


>sp|PTH_METM5|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain C5 /

Query: 1 VLNIFKNMN 9
+L IFKN+N
Sbjct: 63 LLEIFKNVN 71


>sp|PTH_METMP|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VLNIFKNMN 9
+L IFKN+N
Sbjct: 63 LLEIFKNVN 71


>sp|PIP_THEVO|PROLINE iminopeptidase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 NIFKNMNG 10
N+++ MNG
Sbjct: 205 NVYRTMNG 212


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 5 FKNMNG 10
F+NMNG
Sbjct: 377 FQNMNG 382


>sp|VAPC1_METJA|RIBONUCLEASE VapC1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLNIFKNM 8
VLNIFK +
Sbjct: 62 VLNIFKEL 69


>sp|HACA_METTH|PROBABLE methanogen homoaconitase large subunit|Methanothermobacter

Query: 1 VLNIFKNMNG 10
++NIF+N G
Sbjct: 96 IVNIFQNAAG 105


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC 43049

Query: 1 VLNIFKNM 8
V NI+KN+
Sbjct: 439 VFNIYKNL 446


>sp|FUCA_META3|L-FUCULOSE phosphate aldolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LNIFKNMNG 10
LNI+K NG
Sbjct: 74 LNIYKKRNG 82


>sp|Y1336_METJA|UNCHARACTERIZED protein MJ1336|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLNIFKNMNG 10
+L + KN+NG
Sbjct: 26 ILGVIKNLNG 35




41|Sequence|201|210|KNMNGSYSLP

>sp|RLME_NATPD|RIBOSOMAL RNA large subunit methyltransferase|Natronomonas pharaonis (strain

Query: 2 NMNGSYSL 9
NM G YSL
Sbjct: 111 NMTGEYSL 118


>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 1 KNMNGSYSL 9
K +NG+Y+L
Sbjct: 156 KKLNGTYAL 164


>sp|CCA_METJA|CCA-ADDING enzyme|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNMNGSYSL 9
K +NGSY++
Sbjct: 98 KRLNGSYNI 106


>sp|Y1285_METJA|UNCHARACTERIZED protein MJ1285|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNMNGSYSLP 10
+N+NGSY +
Sbjct: 89 ENLNGSYIIA 98


>sp|RNH_SULTO|RIBONUCLEASE HI|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KNMNGSYSL 9
K MNG Y +
Sbjct: 82 KQMNGEYKV 90




42|Sequence|206|215|SYSLPRLECS

>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 2 YSLPRLEC 9
Y+LP+L C
Sbjct: 671 YTLPKLFC 678


>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 4 LPRLEC 9
LPRL+C
Sbjct: 28 LPRLKC 33




43|Sequence|211|220|RLECSGAIMA

>sp|PROB_METBF|GLUTAMATE 5-kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RLECSGAIMA 10
RLEC G + A
Sbjct: 329 RLECEGRVFA 338


>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RLECSGAIMA 10
+LEC G I A
Sbjct: 329 KLECDGKIFA 338


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 RLECSGAIMA 10
R EC GA+ A
Sbjct: 16 RAECGGAVTA 25


>sp|PROB_METAC|GLUTAMATE 5-kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RLECSGAIMA 10
+LEC G + A
Sbjct: 329 KLECEGKVFA 338


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 1 RLECSG 6
RLEC+G
Sbjct: 453 RLECAG 458


>sp|PRIS_HYPBU|DNA primase small subunit PriS|Hyperthermus butylicus (strain DSM 5456

Query: 3 ECSGAIM 9
ECSG+I+
Sbjct: 109 ECSGSIV 115


>sp|AROA_METPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaerula palustris (strain ATCC

Query: 2 LECSGAIMA 10
LE +GA+MA
Sbjct: 200 LEITGAVMA 208


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 3 ECSGAIMA 10
EC GA+ A
Sbjct: 18 ECGGAVTA 25


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 3 ECSGAIMA 10
EC GA+ A
Sbjct: 20 ECGGAVTA 27




44|Sequence|216|225|GAIMARCNLD

>sp|IDSA_METJA|SHORT chain isoprenyl diphosphate synthase|Methanocaldococcus jannaschii

Query: 1 GAIMARCN 8
GA+MA CN
Sbjct: 188 GAVMADCN 195


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 2 AIMARCNLD 10
++ RCN+D
Sbjct: 116 GVLPRCNMD 124


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 1 GAIMARC 7
A+MARC
Sbjct: 486 AAVMARC 492


>sp|PYRH_METBU|URIDYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 3 IMARCNLD 10
I+ RCN+D
Sbjct: 190 IIERCNID 197


>sp|DCD_PYRCJ|DCTP deaminase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GAIMARCNLD 10
GA++ C+LD
Sbjct: 47 GAVVRPCDLD 56


>sp|YNH2_METBA|UNCHARACTERIZED protein in nifH2 5'region|Methanosarcina barkeri

Query: 1 GAIMARCNLD 10
GA++ RC D
Sbjct: 101 GAVLDRCRYD 110


>sp|DCD_PYRNV|DCTP deaminase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GAIMARCNLD 10
GA++ C LD
Sbjct: 47 GAVVKPCELD 56




45|Sequence|221|230|RCNLDHLGSS

>sp|RL14E_METKA|LARGE ribosomal subunit protein eL14|Methanopyrus kandleri (strain AV19

Query: 1 RCNLDHL 7
RCN+ HL
Sbjct: 49 RCNIKHL 55


>sp|RL14E_METJA|LARGE ribosomal subunit protein eL14|Methanocaldococcus jannaschii

Query: 1 RCNLDHL 7
RCN+ HL
Sbjct: 43 RCNIKHL 49


>sp|RL14E_METTH|LARGE ribosomal subunit protein eL14|Methanothermobacter

Query: 1 RCNLDHL 7
RCN+ HL
Sbjct: 44 RCNVSHL 50


>sp|RL14E_METM7|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 RCNLDHL 7
RCNL H+
Sbjct: 43 RCNLKHV 49


>sp|RL14E_METMP|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 RCNLDHL 7
RCNL H+
Sbjct: 43 RCNLKHV 49


>sp|RL14E_METM6|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 RCNLDHL 7
RCNL H+
Sbjct: 43 RCNLKHV 49


>sp|SYFB_THEAC|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 NLDHLG 8
N+DHLG
Sbjct: 537 NMDHLG 542


>sp|RL14E_METM5|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 RCNLDHL 7
RCNL H
Sbjct: 43 RCNLKHF 49


>sp|Y1105_METKA|PUTATIVE nickel insertion protein|Methanopyrus kandleri (strain AV19 /

Query: 2 CNLDHLGSS 10
C+L LGSS
Sbjct: 115 CHLHELGSS 123


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 CNLDHLG 8
CNL H G
Sbjct: 171 CNLSHPG 177




46|Sequence|226|235|HLGSSDPPTS

>sp|THIE_PICTO|THIAMINE-PHOSPHATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 HLGSSDPP 8
H+G DPP
Sbjct: 81 HIGKDDPP 88


>sp|THIE_THEVO|THIAMINE-PHOSPHATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HLGSSDPP 8
H+G DPP
Sbjct: 84 HIGRDDPP 91


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LGSSDPPT 9
+G+S PPT
Sbjct: 233 MGTSQPPT 240


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 4 SSDPPTS 10
S DPPTS
Sbjct: 401 SDDPPTS 407


>sp|THIE_HALMA|THIAMINE-PHOSPHATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HLGSSDPPTS 10
HLG D P S
Sbjct: 83 HLGDDDLPVS 92


>sp|Y630_METJA|PUTATIVE phosphate permease MJ0630|Methanocaldococcus jannaschii (strain

Query: 1 HLGSSDPPT 9
+LGS+D PT
Sbjct: 171 NLGSNDLPT 179


>sp|FAU1_IGNH4|PROBABLE ribonuclease FAU-1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 HLGSSDPP 8
H GS +PP
Sbjct: 40 HEGSPEPP 47


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HLGSSDPPTS 10
H G +D PT+
Sbjct: 92 HFGMTDDPTT 101


>sp|THIE_METAR|THIAMINE-PHOSPHATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 HLGSSDPP 8
H+G SD P
Sbjct: 82 HIGQSDMP 89


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 3 GSSDPPT 9
G+S PPT
Sbjct: 236 GASQPPT 242


>sp|THIE_METS3|THIAMINE-PHOSPHATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 HLGSSDPP 8
H+G SD P
Sbjct: 84 HVGQSDMP 91


>sp|CRYD_NATPD|CRYPTOCHROME DASH|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LGSSDPPT 9
LG S+PPT
Sbjct: 193 LGVSEPPT 200


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 LGSSDPPTS 10
LGS+ PP +
Sbjct: 217 LGSASPPAT 225


>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 1 HLGSSDPP 8
+LG S+PP
Sbjct: 61 NLGHSEPP 68


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 LGSSDPPTS 10
LGS+ PP +
Sbjct: 217 LGSASPPAT 225


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LGSSDPPTS 10
LGS+ PP +
Sbjct: 217 LGSASPPAT 225


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LGSSDPPTS 10
LGS+ PP +
Sbjct: 215 LGSASPPAT 223


>sp|COBQ_METB6|PROBABLE cobyric acid synthase|Methanoregula boonei (strain DSM 21154

Query: 1 HLGSSDPPT 9
H+G +DP T
Sbjct: 392 HMGVTDPGT 400


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LGSSDPPTS 10
LGS+ PP +
Sbjct: 217 LGSASPPAT 225


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 4 SSDPPTS 10
S DPPT+
Sbjct: 361 SQDPPTT 367


>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 1 HLGSSDPPTS 10
H+G+ DP S
Sbjct: 36 HIGTLDPGVS 45




47|Sequence|231|240|DPPTSASQVA

>sp|COFH_HALSA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Halobacterium salinarum (strain ATCC

Query: 1 DPPTSASQVA 10
DP T A+Q+A
Sbjct: 175 DPTTYAAQIA 184




48|Sequence|236|245|ASQVAEIIVN

>sp|Y1540_METJA|UNCHARACTERIZED protein MJ1540|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ASQVAEIIVN 10
AS++AEI+VN
Sbjct: 80 ASKIAEILVN 89


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VAEIIVN 10
VAEII+N
Sbjct: 208 VAEIIIN 214




49|Sequence|241|250|EIIVNSGDGI

>sp|OFOB_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Saccharolobus solfataricus

Query: 1 EIIVNSGDG 9
E+IVN GDG
Sbjct: 83 EVIVNGGDG 91


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EIIVNSGDGI 10
EI+VN GD I
Sbjct: 444 EILVNPGDKI 453


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain

Query: 1 EIIVNSGDG 9
E+IVN GDG
Sbjct: 83 EVIVNVGDG 91


>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IIVNSGDGI 10
IIVN GD I
Sbjct: 453 IIVNPGDKI 461


>sp|PYRB_SACS2|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus solfataricus

Query: 3 IVNSGDG 9
I+N+GDG
Sbjct: 119 IINAGDG 125


>sp|PYRB_SACI6|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 3 IVNSGDG 9
I+N+GDG
Sbjct: 119 IINAGDG 125


>sp|PYRB_SACI4|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 3 IVNSGDG 9
I+N+GDG
Sbjct: 119 IINAGDG 125


>sp|PYRB_SACI7|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 3 IVNSGDG 9
I+N+GDG
Sbjct: 119 IINAGDG 125


>sp|PYRB_SACI2|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 3 IVNSGDG 9
I+N+GDG
Sbjct: 119 IINAGDG 125


>sp|PYRB_SACI1|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 3 IVNSGDG 9
I+N+GDG
Sbjct: 119 IINAGDG 125


>sp|PYRB_SACI3|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 3 IVNSGDG 9
I+N+GDG
Sbjct: 119 IINAGDG 125


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 EIIVNSGDG 9
EI VNS DG
Sbjct: 566 EIYVNSDDG 574


>sp|PYRB_METJA|ASPARTATE carbamoyltransferase catalytic subunit|Methanocaldococcus

Query: 3 IVNSGDG 9
I+N+GDG
Sbjct: 121 IINAGDG 127


>sp|LEU3_HALVD|3-ISOPROPYLMALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 EIIVNSGDGI 10
EI+V GDGI
Sbjct: 4 EIVVIPGDGI 13


>sp|PYRB_METBF|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina barkeri

Query: 3 IVNSGDG 9
I+N GDG
Sbjct: 125 IINGGDG 131


>sp|PYRB_HALLT|ASPARTATE carbamoyltransferase catalytic subunit|Halorubrum lacusprofundi

Query: 3 IVNSGDG 9
+VN+GDG
Sbjct: 121 VVNAGDG 127


>sp|PYRB_THEPD|ASPARTATE carbamoyltransferase catalytic subunit|Thermofilum pendens (strain

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 132 VINAGDG 138


>sp|PYRB_THEON|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus onnurineus

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 125 VINAGDG 131


>sp|PYRB_METS5|ASPARTATE carbamoyltransferase catalytic subunit|Metallosphaera sedula

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 117 VINAGDG 123


>sp|PYRB_METPE|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaerula palustris

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 118 VINAGDG 124


>sp|PYRB_METMJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanoculleus marisnigri

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 118 VINAGDG 124


>sp|PYRB_KORCO|ASPARTATE carbamoyltransferase catalytic subunit|Korarchaeum cryptofilum

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 118 VINAGDG 124


>sp|PYRB_IGNH4|ASPARTATE carbamoyltransferase catalytic subunit|Ignicoccus hospitalis

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 121 VINAGDG 127


>sp|PYRB_HYPBU|ASPARTATE carbamoyltransferase catalytic subunit|Hyperthermus butylicus

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 129 VINAGDG 135


>sp|PYRB_CALMQ|ASPARTATE carbamoyltransferase catalytic subunit|Caldivirga maquilingensis

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 123 VINAGDG 129


>sp|PYRB_PYRIL|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum islandicum

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 122 VINAGDG 128


>sp|PYRB_SULTO|ASPARTATE carbamoyltransferase catalytic subunit|Sulfurisphaera tokodaii

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 118 VINAGDG 124


>sp|PYRB_PYRCJ|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum calidifontis

Query: 3 IVNSGDG 9
+VN GDG
Sbjct: 122 VVNGGDG 128


>sp|PYRB_THEGJ|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus gammatolerans

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 125 VINAGDG 131


>sp|PYRB_PYRAB|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus abyssi (strain

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 125 VINAGDG 131


>sp|PYRB_METAR|ASPARTATE carbamoyltransferase catalytic subunit|Methanocella arvoryzae

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 123 VINAGDG 129


>sp|PYRB_THEVO|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma volcanium

Query: 3 IVNSGDG 9
I+N+GDG
Sbjct: 124 IINAGDG 130


>sp|PYRB_THEKO|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus kodakarensis

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 125 VINAGDG 131


>sp|PYRB_METBU|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcoides burtonii

Query: 3 IVNSGDG 9
I+N+GDG
Sbjct: 125 ILNAGDG 131


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus (strain

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 125 VINAGDG 131


>sp|PYRB_HALMA|ASPARTATE carbamoyltransferase catalytic subunit|Haloarcula marismortui

Query: 3 IVNSGDG 9
+VN+GDG
Sbjct: 121 LVNAGDG 127


>sp|PYRB_NATPD|ASPARTATE carbamoyltransferase catalytic subunit|Natronomonas pharaonis

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 121 VINAGDG 127


>sp|PYRB_PYRHO|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus horikoshii

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 125 VINAGDG 131


>sp|PYRB_METTH|ASPARTATE carbamoyltransferase catalytic subunit|Methanothermobacter

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 122 VINAGDG 128


>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 125 VINAGDG 131


>sp|PYRB_HALWD|ASPARTATE carbamoyltransferase catalytic subunit|Haloquadratum walsbyi

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 121 VINAGDG 127


>sp|PYRB_ARCFU|ASPARTATE carbamoyltransferase catalytic subunit|Archaeoglobus fulgidus

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 122 VINAGDG 128


>sp|PYRB_META3|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus aeolicus

Query: 3 IVNSGDG 9
I+N+GDG
Sbjct: 121 IINAGDG 127


>sp|PYRB_METST|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaera stadtmanae

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 125 VINAGDG 131


>sp|PYRB_STAMF|ASPARTATE carbamoyltransferase catalytic subunit|Staphylothermus marinus

Query: 3 IVNSGDG 9
++N GDG
Sbjct: 125 VINGGDG 131


>sp|PYRB_PYRNV|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum neutrophilum

Query: 3 IVNSGDG 9
++N GDG
Sbjct: 122 VINGGDG 128


>sp|PYRB_PYRAR|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum arsenaticum

Query: 3 IVNSGDG 9
++N GDG
Sbjct: 122 VINGGDG 128


>sp|PYRB_METMA|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina mazei (strain

Query: 3 IVNSGDG 9
++N GDG
Sbjct: 126 VINGGDG 132


>sp|PYRB_METAC|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina acetivorans

Query: 3 IVNSGDG 9
++N GDG
Sbjct: 125 VINGGDG 131


>sp|PYRB_AERPE|ASPARTATE carbamoyltransferase catalytic subunit|Aeropyrum pernix (strain

Query: 3 IVNSGDG 9
++N GDG
Sbjct: 124 VINGGDG 130


>sp|PYRB_METLZ|ASPARTATE carbamoyltransferase catalytic subunit|Methanocorpusculum labreanum

Query: 3 IVNSGDG 9
++N GDG
Sbjct: 122 VINGGDG 128


>sp|PYRB_SULAC|ASPARTATE carbamoyltransferase catalytic subunit|Sulfolobus acidocaldarius

Query: 3 IVNSGDG 9
++N+GDG
Sbjct: 119 VINAGDG 125


>sp|TOP6B_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IIVNSGDG 9
+I N+GDG
Sbjct: 517 VIKNNGDG 524


>sp|LEU3_ARCFU|3-ISOPROPYLMALATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EIIVNSGDGI 10
+I+V GDGI
Sbjct: 3 KIVVIPGDGI 12




50|Sequence|246|255|SGDGIDYSQQ

>sp|PSB_FERPA|PROTEASOME subunit beta|Ferroglobus placidus (strain DSM 10642

Query: 1 SGDGID 6
SGDGID
Sbjct: 180 SGDGID 185


>sp|SURE_THEKO|5'-NUCLEOTIDASE SurE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GDGIDYS 8
G+GID+S
Sbjct: 137 GEGIDFS 143


>sp|PSB1_NITMS|PROTEASOME subunit beta 1|Nitrosopumilus maritimus (strain SCM1)

Query: 1 SGDGID 6
SGDG+D
Sbjct: 176 SGDGVD 181


>sp|PSB1_DESA1|PROTEASOME subunit beta 1|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 SGDGID 6
SGDGID
Sbjct: 177 SGDGID 182


>sp|PSB2_KORCO|PROTEASOME subunit beta 2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 SGDGID 6
SGDGID
Sbjct: 174 SGDGID 179


>sp|THI4_THEKO|THIAMINE thiazole synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GIDYSQ 9
G+DYSQ
Sbjct: 86 GVDYSQ 91


>sp|PSB1_IGNH4|PROTEASOME subunit beta 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 SGDGID 6
SGDGID
Sbjct: 174 SGDGID 179


>sp|PSB1_SULAC|PROTEASOME subunit beta 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SGDGID 6
SGDGID
Sbjct: 174 SGDGID 179


>sp|BIOB_CENSY|BIOTIN synthase|Cenarchaeum symbiosum (strain A)

Query: 1 SGDGIDYSQ 9
+GDG+D Q
Sbjct: 44 NGDGVDVEQ 52


>sp|PSB1_SULTO|PROTEASOME subunit beta 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SGDGID 6
SGDGID
Sbjct: 174 SGDGID 179


>sp|PSB_ARCPA|PROTEASOME subunit beta|Archaeoglobus profundus (strain DSM 5631

Query: 1 SGDGID 6
SGDGID
Sbjct: 183 SGDGID 188


>sp|PSB2_CALMQ|PROTEASOME subunit beta 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 SGDGID 6
SGDGID
Sbjct: 179 SGDGID 184


>sp|PSB2_SACI9|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.D.8.5 /

Query: 1 SGDGIDYS 8
SGDGID +
Sbjct: 174 SGDGIDLA 181


>sp|PSB2_SACI7|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 SGDGIDYS 8
SGDGID +
Sbjct: 174 SGDGIDLA 181


>sp|PSB2_SACI6|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SGDGIDYS 8
SGDGID +
Sbjct: 174 SGDGIDLA 181


>sp|PSB2_SACI4|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SGDGIDYS 8
SGDGID +
Sbjct: 174 SGDGIDLA 181


>sp|PSB2_SACI3|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.27)

Query: 1 SGDGIDYS 8
SGDGID +
Sbjct: 174 SGDGIDLA 181


>sp|PSB2_SACI2|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 SGDGIDYS 8
SGDGID +
Sbjct: 174 SGDGIDLA 181


>sp|PSB1_SACI1|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 SGDGIDYS 8
SGDGID +
Sbjct: 174 SGDGIDLA 181


>sp|PSB1_SACS9|PROTEASOME subunit beta 1|Saccharolobus solfataricus (strain 98/2) (Sulfolobus

Query: 1 SGDGIDYS 8
SGDGID +
Sbjct: 174 SGDGIDLA 181


>sp|PSB1_SACS2|PROTEASOME subunit beta 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SGDGIDYS 8
SGDGID +
Sbjct: 174 SGDGIDLA 181


>sp|PSB_ARCFU|PROTEASOME subunit beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SGDGID 6
SGDGID
Sbjct: 182 SGDGID 187


>sp|PSB1_STAMF|PROTEASOME subunit beta 1|Staphylothermus marinus (strain ATCC 43588

Query: 1 SGDGID 6
SGDG+D
Sbjct: 187 SGDGVD 192


>sp|PSB2_METS5|PROTEASOME subunit beta 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 SGDGID 6
SGDGID
Sbjct: 174 SGDGID 179


>sp|SURE_THEGJ|5'-NUCLEOTIDASE SurE|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GDGIDYS 8
G+G+D+S
Sbjct: 137 GEGVDFS 143


>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 1 SGDGIDYSQ 9
+GDG+D Q
Sbjct: 359 AGDGVDADQ 367


>sp|PSB1_HYPBU|PROTEASOME subunit beta 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 SGDGID 6
SGDGID
Sbjct: 179 SGDGID 184


>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GDGIDYSQ 9
GDG+ YS+
Sbjct: 210 GDGVYYSK 217




51|Sequence|251|260|DYSQQKRENI

>sp|AGL5_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl5|Haloferax volcanii

Query: 1 DYSQQKREN 9
DY +QK E+
Sbjct: 191 DYDEQKEED 199


>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DYSQQKRENI 10
DY +Q +ENI
Sbjct: 169 DYKRQDQENI 178


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DYSQQKRENI 10
DY KREN+
Sbjct: 329 DYQIGKRENV 338


>sp|TOP6A_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 DYSQQKRE 8
DYS +KRE
Sbjct: 117 DYSGRKRE 124


>sp|NDK_STAMF|NUCLEOSIDE diphosphate kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 DYSQQKRENI 10
DYS K +N+
Sbjct: 106 DYSLSKSQNV 115


>sp|Y1679_PYRNV|DNA-BINDING protein Tneu_1679|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 YSQQKRE 8
YSQ KRE
Sbjct: 99 YSQSKRE 105




52|Sequence|256|265|KRENIGDLIQ

>sp|HIS7_METS5|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KRENIGDL 8
KRE IGDL
Sbjct: 123 KREKIGDL 130


>sp|RIBB_METLZ|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanocorpusculum labreanum (strain ATCC

Query: 2 RENIGDLI 9
REN GDLI
Sbjct: 28 RENEGDLI 35


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 ENIGDLIQ 10
+NIGDLI+
Sbjct: 45 KNIGDLIK 52


>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 1 KRENIGDLI 9
+RE +GD++
Sbjct: 37 RREEVGDIV 45


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 1 KRENIGDLI 9
KRE GD++
Sbjct: 393 KREGFGDIL 401


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 1 KRENIGDLI 9
KRE GD++
Sbjct: 393 KREGFGDIL 401


>sp|HIS7_METJA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRENIGDL 8
KRE +GDL
Sbjct: 125 KREFVGDL 132


>sp|RAD50_PYRHO|DNA double-strand break repair Rad50|Pyrococcus horikoshii (strain ATCC

Query: 1 KRENIGDLIQ 10
K ENI DLI+
Sbjct: 190 KTENIEDLIR 199


>sp|OTC_METST|ORNITHINE carbamoyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KRENIGDLIQ 10
K EN+ +L+Q
Sbjct: 101 KHENVEELVQ 110


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii

Query: 1 KRENIGDLI 9
KREN+G I
Sbjct: 46 KRENVGRAI 54


>sp|LONH_METTH|PUTATIVE lon protease homolog|Methanothermobacter thermautotrophicus (strain

Query: 1 KRENIGDLI 9
+R++IGDL+
Sbjct: 159 RRKHIGDLL 167


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 ENIGDL 8
EN+GDL
Sbjct: 291 ENVGDL 296


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 ENIGDL 8
EN+GDL
Sbjct: 291 ENVGDL 296




53|Sequence|261|270|GDLIQETLEA

>sp|PFDA_METS3|PREFOLDIN subunit alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GDLIQETLE 9
GDLIQ+ +E
Sbjct: 21 GDLIQQQIE 29


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DLIQETLEA 10
DLI +T+EA
Sbjct: 100 DLIADTIEA 108


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DLIQETLEA 10
DLI +T+EA
Sbjct: 100 DLIADTIEA 108


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 DLIQETLEA 10
DLI +T+EA
Sbjct: 100 DLIADTIEA 108


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DLIQETLEA 10
DLI +T+EA
Sbjct: 100 DLIADTIEA 108




54|Sequence|266|275|ETLEAFERYG

>sp|METE_THEAC|METHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ETLEAFERYG 10
ETLE FER G
Sbjct: 41 ETLEVFERSG 50


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ETLEAFERY 9
E LE FERY
Sbjct: 230 EKLECFERY 238


>sp|ENGB_METJA|PROBABLE GTP-binding protein EngB|Methanocaldococcus jannaschii (strain

Query: 1 ETLEAFERY 9
ET++ FERY
Sbjct: 3 ETMDFFERY 11


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain

Query: 3 LEAFERY 9
+EAFERY
Sbjct: 72 MEAFERY 78


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 4 EAFERYG 10
EAF++YG
Sbjct: 96 EAFQKYG 102


>sp|OTC_META3|ORNITHINE carbamoyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 TLEAFERYG 10
TLE F +YG
Sbjct: 104 TLEDFTKYG 112


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ETLEAFERYG 10
E +EA +RYG
Sbjct: 592 EKIEAAKRYG 601


>sp|IF2P_META3|PROBABLE translation initiation factor IF-2|Methanococcus aeolicus (strain

Query: 4 EAFERY 9
EAFERY
Sbjct: 578 EAFERY 583


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 4 EAFERYG 10
EAFER+G
Sbjct: 98 EAFERFG 104


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 4 EAFERYG 10
EAFER+G
Sbjct: 98 EAFERFG 104


>sp|SYH_METJA|HISTIDINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EAFERYG 10
E FERYG
Sbjct: 31 EVFERYG 37


>sp|URED_NATPD|UREASE accessory protein UreD|Natronomonas pharaonis (strain ATCC 35678

Query: 4 EAFERYG 10
+AF+RYG
Sbjct: 6 DAFQRYG 12


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ETLEAFERY 9
E EAFE Y
Sbjct: 310 EVCEAFEEY 318


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LEAFERYG 10
LEAF+RY
Sbjct: 115 LEAFDRYA 122


>sp|G3P2_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 LEAFERYG 10
LEAFE+ G
Sbjct: 59 LEAFEKAG 66


>sp|G3P2_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LEAFERYG 10
LEAFE+ G
Sbjct: 59 LEAFEKAG 66


>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 3 LEAFERYG 10
LEAFE+ G
Sbjct: 59 LEAFEKAG 66


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 5 AFERYG 10
A+ERYG
Sbjct: 34 AYERYG 39


>sp|TTDB_METJA|PUTATIVE L(+)-tartrate dehydratase subunit beta|Methanocaldococcus

Query: 1 ETLEAFERYG 10
E L+ FE YG
Sbjct: 110 ELLKTFEDYG 119


>sp|QUEC_HALMA|7-CYANO-7-DEAZAGUANINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 LEAFERYG 10
LEAF+R G
Sbjct: 210 LEAFQRIG 217


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 ETLEAFERY 9
E +AFERY
Sbjct: 729 EVTDAFERY 737


>sp|HLY_HALMT|HALOLYSIN mediterranei (strain ATCC 33500

Query: 1 ETLEAFERYG 10
ETL ++ YG
Sbjct: 309 ETLASYSNYG 318


>sp|SYW_METJA|TRYPTOPHAN--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ETLEAFERYG 10
ETLE ++YG
Sbjct: 287 ETLEEHKKYG 296


>sp|RISB_THEGJ|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 TLEAFERYG 10
L+ FER+G
Sbjct: 36 ALDCFERHG 44


>sp|AROA_METKA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 TLEAFERYG 10
T+E ER+G
Sbjct: 205 TVETLERFG 213


>sp|KAD6_METTH|PUTATIVE adenylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 2 TLEAFERYG 10
T+EAFE +G
Sbjct: 120 TVEAFEIHG 128


>sp|KCY_PYRFU|CYTIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TLEAFERYG 10
TLE F++Y
Sbjct: 50 TLEEFQKYA 58


>sp|Y586_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0586|Methanocaldococcus

Query: 2 TLEAFERY 9
TL+ FERY
Sbjct: 114 TLQKFERY 121


>sp|VPB15_ARCFU|PUTATIVE antitoxin VapB15|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TLEAFER 8
TLEA+ER
Sbjct: 9 TLEAYER 15




55|Sequence|271|280|FERYGGENAF

>sp|AROE_HALMA|SHIKIMATE dehydrogenase (NADP(+))|Haloarcula marismortui (strain ATCC 43049

Query: 1 FERYGGENA 9
FER+ GE+A
Sbjct: 244 FERWTGEDA 252


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FERYGGE 7
+ERYGGE
Sbjct: 773 WERYGGE 779


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ERYGGENAF 10
E+YG NAF
Sbjct: 43 EKYGDPNAF 51


>sp|GFCR_METPE|TRANSCRIPTIONAL regulator GfcR|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 FERYGGENA 9
F + GGENA
Sbjct: 141 FSQVGGENA 149


>sp|URED_NATPD|UREASE accessory protein UreD|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FERYGGEN 8
F+RYG E+
Sbjct: 8 FQRYGAES 15


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 FERYGGENA 9
+E+Y GE A
Sbjct: 792 YEKYAGEKA 800


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ERYGGENAF 10
E+YG NAF
Sbjct: 43 EKYGDPNAF 51


>sp|PORB_PYRAB|PYRUVATE synthase subunit PorB|Pyrococcus abyssi (strain GE5 /

Query: 2 ERYGGENAF 10
E+YG NAF
Sbjct: 43 EKYGDPNAF 51


>sp|Y564_METTH|UNCHARACTERIZED protein MTH_564|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FERYGGEN 8
F+ YGGE+
Sbjct: 119 FDTYGGED 126


>sp|ARGB_METMP|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FERYGGEN 8
ERYGG++
Sbjct: 111 LERYGGKS 118


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 FERYGGE 7
+E+YGG+
Sbjct: 563 YEKYGGQ 569


>sp|Y1565_METJA|PROBABLE helicase MJ1565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RYGGEN 8
RYGGE+
Sbjct: 474 RYGGED 479


>sp|ARGB_METM6|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 FERYGGE 7
ERYGG+
Sbjct: 111 LERYGGK 117


>sp|ARGB_METM5|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 FERYGGE 7
ERYGG+
Sbjct: 111 LERYGGK 117


>sp|MDH_SULAC|MALATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FERYGGEN 8
F +Y GEN
Sbjct: 129 FMKYSGEN 136


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FERYGGE----NAF 10
FER GGE NAF
Sbjct: 131 FERLGGEKFNLNAF 144


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 ERYGGEN 8
ERYGG +
Sbjct: 430 ERYGGNS 436


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ERYGGE 7
+RYGGE
Sbjct: 124 KRYGGE 129


>sp|Y1676_METJA|UNCHARACTERIZED protein MJ1676|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FERYGGEN 8
F+ YGGE+
Sbjct: 117 FDTYGGES 124


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 ERYGGE 7
ER+GGE
Sbjct: 92 ERFGGE 97


>sp|FEOA_METJA|PUTATIVE Fe(2+) transport protein A|Methanocaldococcus jannaschii (strain

Query: 4 YGGEN 8
YGGEN
Sbjct: 75 YGGEN 79




56|Sequence|276|285|GENAFINIKY

>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 ENAFINIKY 10
EN++IN KY
Sbjct: 307 ENSYINPKY 315


>sp|Y182_THEAC|UPF0145 protein Ta0182|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GENAFINIKY 10
G NA IN+++
Sbjct: 76 GANAVINVRF 85


>sp|Y873_SACI7|UPF0145 protein YG5714_0873|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GENAFINIKY 10
G NA +NI++
Sbjct: 80 GANAVVNIRF 89


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 ENAFINIK 9
EN FIN++
Sbjct: 501 ENRFINVE 508


>sp|Y1269_PYRHO|UPF0098 protein PH1269|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GENAFINIKY 10
G N FI KY
Sbjct: 53 GNNEFIPAKY 62


>sp|Y1926_THEKO|UPF0145 protein TK1926|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GENAFINIKY 10
G NA +N+++
Sbjct: 79 GANAVVNVRF 88


>sp|Y1976_SACS2|UPF0145 protein SSO1976|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GENAFINIKY 10
G NA +N+++
Sbjct: 80 GANAVVNVRF 89




57|Sequence|281|290|INIKYVVPTY

>sp|DTDA_PICTO|D-AMINOACYL-TRNA deacylase|Picrophilus torridus (strain ATCC 700027

Query: 1 INIKYVVPTY 10
INI +++P Y
Sbjct: 194 INIGHIIPKY 203


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NIKYVVPTY 10
N++YV PTY
Sbjct: 2000 NLQYVKPTY 2008


>sp|AGCS_METMP|SODIUM/ALANINE symporter AgcS|Methanococcus maripaludis (strain DSM 14266

Query: 1 INIKYVVPTY 10
+NI Y++P +
Sbjct: 233 MNIGYIIPAF 242


>sp|FWDF_METJA|POLYFERREDOXIN protein FwdF|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INIKYVVPT 9
IN+KY PT
Sbjct: 171 INLKYNYPT 179


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INIKYVVPTY 10
INI+ VVP +
Sbjct: 423 INIRQVVPFF 432


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 INIKYVVPTY 10
IN+K+V+ Y
Sbjct: 220 INMKHVIDAY 229




58|Sequence|286|296|VVPTYESCLLN

>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 2 VPTYESCLLN 11
+P E CLLN
Sbjct: 226 IPDEEECLLN 235


>sp|Y1289_HALVD|UNCHARACTERIZED protein HVO_1289|Haloferax volcanii (strain ATCC 29605

Query: 1 VVPTYESCLL 10
+V TY SC L
Sbjct: 41 LVATYASCFL 50


>sp|RPO3_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum arsenaticum (strain DSM

Query: 2 VPTYESC 8
+PTYE C
Sbjct: 75 LPTYEEC 81


>sp|THIM_HALWD|HYDROXYETHYLTHIAZOLE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VVPTYESCLLN 11
+V E+CLLN
Sbjct: 65 MVNAAEACLLN 75


>sp|Y1607_METJA|UNCHARACTERIZED glycosyltransferase MJ1607|Methanocaldococcus jannaschii (strain

Query: 4 TYESC 8
TYESC
Sbjct: 146 TYESC 150


>sp|QUED_METTH|PUTATIVE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Methanothermobacter

Query: 1 VVPTYESC 8
++P +ESC
Sbjct: 22 MIPEHESC 29


>sp|THIM_NATPD|HYDROXYETHYLTHIAZOLE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VVPTYESCLLN 11
+V T + CL+N
Sbjct: 59 MVATADGCLIN 69






THE END