NUBPL_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|FLLLRQWIGM

>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 6 QWIGM 10
QWIGM
Sbjct: 49 QWIGM 53


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LLLRQWI 8
L+LR+WI
Sbjct: 542 LVLREWI 548


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 FLLLRQWI 8
F +LR WI
Sbjct: 293 FAMLRDWI 300


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLLRQWI 8
L+LR WI
Sbjct: 645 LMLRSWI 651


>sp|MBD_THEAC|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma acidophilum (strain

Query: 2 LLLRQWI 8
L+LR WI
Sbjct: 20 LILRSWI 26


>sp|Y1632_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 2 LLLRQWI 8
L+LR+W+
Sbjct: 5 LMLREWL 11


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FLLLRQWI 8
+ +L+QWI
Sbjct: 751 YFILKQWI 758


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 FLLLRQWI 8
+ +L+QWI
Sbjct: 751 YFILKQWI 758


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FLLLRQWI 8
+ +L+QWI
Sbjct: 688 YYILKQWI 695


>sp|RNP1_ARCFU|RIBONUCLEASE P protein component 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLLRQWIGM 10
L+ R WIG+
Sbjct: 10 LIARDWIGL 18




2|SequenceR|15|6|LSVGGFLLLR

>sp|Y1293_METJA|UNCHARACTERIZED protein MJ1293|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSVGGFLLL 9
LS+GGFL++
Sbjct: 217 LSIGGFLVV 225


>sp|AATC_METTP|A-TYPE ATP synthase subunit C|Methanothrix thermoacetophila (strain DSM

Query: 1 LSVGGFLLLR 10
LSVGG LLL+
Sbjct: 198 LSVGGGLLLK 207


>sp|PSB1_SULTO|PROTEASOME subunit beta 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LSVGGFLLLR 10
LS GGF+L R
Sbjct: 25 LSYGGFVLSR 34


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 LSVGGFLLLR 10
L +GG LLR
Sbjct: 252 LGIGGMRLLR 261


>sp|PSB1_AERPE|PROTEASOME subunit beta 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSVGGFLLLR 10
+S GGF+L R
Sbjct: 25 MSYGGFILSR 34




3|SequenceR|20|11|GGGARLSVGG

>sp|FTSY_METJA|SIGNAL recognition particle receptor FtsY|Methanocaldococcus jannaschii

Query: 2 GGARLSVG 9
GGA LS+G
Sbjct: 357 GGAALSIG 364


>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGARLSVGG 10
GG+ L VGG
Sbjct: 204 GGSTLRVGG 212


>sp|MTNA_METTH|PUTATIVE methylthioribose-1-phosphate isomerase|Methanothermobacter

Query: 1 GGGARLSV 8
G GARLSV
Sbjct: 173 GQGARLSV 180


>sp|PSB1_SACS9|PROTEASOME subunit beta 1|Saccharolobus solfataricus (strain 98/2) (Sulfolobus

Query: 1 GGGARLSVG 9
G GAR+++G
Sbjct: 133 GSGARIAIG 141


>sp|PSB1_SACS2|PROTEASOME subunit beta 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GGGARLSVG 9
G GAR+++G
Sbjct: 133 GSGARIAIG 141


>sp|PSB2_SACI9|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.D.8.5 /

Query: 1 GGGARLSVG 9
G GAR+++G
Sbjct: 133 GSGARIAIG 141


>sp|PSB2_SACI7|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GGGARLSVG 9
G GAR+++G
Sbjct: 133 GSGARIAIG 141


>sp|PSB2_SACI6|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GGGARLSVG 9
G GAR+++G
Sbjct: 133 GSGARIAIG 141


>sp|PSB2_SACI4|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GGGARLSVG 9
G GAR+++G
Sbjct: 133 GSGARIAIG 141


>sp|PSB2_SACI3|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.27)

Query: 1 GGGARLSVG 9
G GAR+++G
Sbjct: 133 GSGARIAIG 141


>sp|PSB2_SACI2|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GGGARLSVG 9
G GAR+++G
Sbjct: 133 GSGARIAIG 141


>sp|PSB1_SACI1|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GGGARLSVG 9
G GAR+++G
Sbjct: 133 GSGARIAIG 141


>sp|APGM_SULAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GGGARLSVG 9
G GARL G
Sbjct: 85 GAGARLKAG 93




4|SequenceR|25|16|LPATAGGGAR

>sp|CAS1_KORCO|CRISPR-ASSOCIATED endonuclease Cas1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LPATAGGGAR 10
+PA AGG AR
Sbjct: 81 IPAKAGGTAR 90


>sp|HIS6_META3|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus aeolicus

Query: 1 LPATAGGGAR 10
+P T GGG R
Sbjct: 75 IPLTVGGGIR 84


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LPATAGGGAR 10
+PAT G G R
Sbjct: 325 IPATRGNGTR 334


>sp|HIS6_METPE|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaerula palustris

Query: 1 LPATAGGGAR 10
LP T GGG R
Sbjct: 76 LPLTVGGGIR 85


>sp|HIS6_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 1 LPATAGGGAR 10
+P T GGG R
Sbjct: 75 IPLTVGGGIR 84


>sp|HIS6_METHJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanospirillum hungatei

Query: 1 LPATAGGGAR 10
LP T GGG R
Sbjct: 76 LPLTVGGGIR 85


>sp|HIS6_METB6|IMIDAZOLE glycerol phosphate synthase subunit|Methanoregula boonei (strain

Query: 1 LPATAGGGAR 10
LP T GGG R
Sbjct: 76 LPLTVGGGLR 85


>sp|HIS6_METMJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanoculleus marisnigri

Query: 1 LPATAGGGAR 10
LP T GGG R
Sbjct: 76 LPLTVGGGIR 85


>sp|HIS6_IGNH4|IMIDAZOLE glycerol phosphate synthase subunit|Ignicoccus hospitalis (strain

Query: 1 LPATAGGGAR 10
+P T GGG R
Sbjct: 76 IPLTVGGGVR 85


>sp|HIS6_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii

Query: 1 LPATAGGGAR 10
+P T GGG R
Sbjct: 75 IPLTVGGGIR 84


>sp|HIS6_METLZ|IMIDAZOLE glycerol phosphate synthase subunit|Methanocorpusculum labreanum

Query: 1 LPATAGGGAR 10
LP T GGG R
Sbjct: 76 LPLTVGGGIR 85


>sp|HIS6_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 1 LPATAGGGAR 10
+P T GGG R
Sbjct: 75 IPLTVGGGIR 84


>sp|HIS6_METS5|IMIDAZOLE glycerol phosphate synthase subunit|Metallosphaera sedula (strain

Query: 1 LPATAGGGAR 10
+P T GGG R
Sbjct: 75 IPLTVGGGVR 84


>sp|HIS6_METVS|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus vannielii

Query: 1 LPATAGGGAR 10
+P T GGG +
Sbjct: 75 IPLTVGGGIK 84


>sp|HIS6_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 LPATAGGGAR 10
+P T GGG +
Sbjct: 75 IPLTVGGGIK 84


>sp|HIS6_METM7|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 LPATAGGGAR 10
+P T GGG +
Sbjct: 75 IPLTVGGGIK 84


>sp|HIS6_METM5|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 LPATAGGGAR 10
+P T GGG +
Sbjct: 75 IPLTVGGGIK 84


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 1 LPATAGGGAR 10
+P T GGG +
Sbjct: 75 IPLTVGGGIK 84


>sp|HIS6_METM6|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 LPATAGGGAR 10
+P T GGG +
Sbjct: 75 IPLTVGGGIK 84


>sp|HIS6_HALSA|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum

Query: 1 LPATAGGGAR 10
+P T GGG R
Sbjct: 81 IPLTVGGGIR 90


>sp|HIS6_HALS3|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum

Query: 1 LPATAGGGAR 10
+P T GGG R
Sbjct: 81 IPLTVGGGIR 90


>sp|HIS6_THEGJ|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus gammatolerans

Query: 1 LPATAGGGAR 10
+P T GGG R
Sbjct: 75 VPFTVGGGIR 84


>sp|HIS6_HALMA|IMIDAZOLE glycerol phosphate synthase subunit|Haloarcula marismortui

Query: 1 LPATAGGGAR 10
+P T GGG R
Sbjct: 81 IPLTVGGGIR 90


>sp|HIS4_META3|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus aeolicus (strain

Query: 1 LPATAGGGAR 10
+P GGG R
Sbjct: 75 VPVEVGGGVR 84


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LPATAGGG 8
LP+ GGG
Sbjct: 351 LPSNVGGG 358


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LPATAGGG 8
LP+ GGG
Sbjct: 358 LPSNVGGG 365


>sp|HIS6_NATPD|IMIDAZOLE glycerol phosphate synthase subunit|Natronomonas pharaonis

Query: 1 LPATAGGGAR 10
+P T GGG R
Sbjct: 81 IPLTVGGGIR 90


>sp|HIS6_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 1 LPATAGGGAR 10
+P T GGG R
Sbjct: 75 VPFTVGGGIR 84


>sp|GLNA_THEKO|GLUTAMINE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LPATAGGGAR 10
+PA G GAR
Sbjct: 311 VPAFKGSGAR 320


>sp|HIS6_HALWD|IMIDAZOLE glycerol phosphate synthase subunit|Haloquadratum walsbyi (strain

Query: 1 LPATAGGGAR 10
+P T GGG R
Sbjct: 80 IPLTVGGGIR 89


>sp|HIS6_NITMS|IMIDAZOLE glycerol phosphate synthase subunit|Nitrosopumilus maritimus

Query: 1 LPATAGGG 8
+P T GGG
Sbjct: 75 IPFTVGGG 82


>sp|HIS6_METAR|IMIDAZOLE glycerol phosphate synthase subunit|Methanocella arvoryzae

Query: 1 LPATAGGGAR 10
+P T GGG +
Sbjct: 79 IPMTVGGGIK 88


>sp|HIS6_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 1 LPATAGGG 8
+P T GGG
Sbjct: 76 IPMTVGGG 83




5|SequenceR|30|21|ARSGGLPATA

>sp|PTH_METS5|PEPTIDYL-TRNA hydrolase|Metallosphaera sedula (strain ATCC 51363

Query: 1 ARSGGLPAT 9
ARS GLP T
Sbjct: 71 ARSQGLPTT 79


>sp|FDHD_SACS2|SULFUR carrier protein FdhD|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SGGLPATA 10
SGGL ATA
Sbjct: 147 SGGLHATA 154


>sp|NADE_HALSA|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 3 SGGLPATA 10
GGLPA+A
Sbjct: 229 DGGLPASA 236


>sp|NADE_HALS3|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 3 SGGLPATA 10
GGLPA+A
Sbjct: 229 DGGLPASA 236


>sp|OGT_METTH|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 ARSGGLPATA 10
AR+GG P +A
Sbjct: 118 ARAGGSPRSA 127


>sp|LYSJ_AERPE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 3 SGGLPATA 10
+GGLPA+A
Sbjct: 243 AGGLPASA 250


>sp|ILVC_SULTO|KETOL-ACID reductoisomerase (NADP(+))|Sulfurisphaera tokodaii (strain DSM

Query: 1 ARSGGLPA 8
A+ GG+PA
Sbjct: 142 AKGGGVPA 149


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 RSGGLPAT 9
R+GG+PA
Sbjct: 317 RAGGIPAV 324


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 RSGGLPAT 9
R+GG+PA
Sbjct: 315 RAGGIPAV 322


>sp|ILVC_SULAC|KETOL-ACID reductoisomerase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ARSGGLPA 8
A+ GG+PA
Sbjct: 142 AKGGGVPA 149


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 2 RSGGLPAT 9
R+GG+PA
Sbjct: 319 RAGGIPAV 326


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RSGGLPAT 9
R+GG+PA
Sbjct: 316 RAGGIPAV 323


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RSGGLPA 8
R+GG+PA
Sbjct: 317 RAGGIPA 323




6|SequenceR|35|26|RGCVMARSGG

>sp|SIHH_METTH|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GCVMARSG 9
GCVMA SG
Sbjct: 286 GCVMANSG 293


>sp|SFSA_SULTO|SUGAR fermentation stimulation protein homolog|Sulfurisphaera tokodaii

Query: 1 RGCVMARSG 9
+GC +AR G
Sbjct: 116 KGCTLARDG 124


>sp|GATB_HALSA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Halobacterium salinarum (strain ATCC

Query: 2 GCVMARSGG 10
G VMA++GG
Sbjct: 469 GQVMAKTGG 477


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RGCVMARSGG 10
RGC A +GG
Sbjct: 215 RGCPRALTGG 224


>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GCVMARSG 9
GC+ RSG
Sbjct: 486 GCIEGRSG 493


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GCVMARSGG 10
GC+MA+ G
Sbjct: 836 GCLMAKGEG 844


>sp|Y1599_METJA|UNCHARACTERIZED protein MJ1599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CVMARSGG 10
C++A SGG
Sbjct: 60 CILAFSGG 67


>sp|Y550_METJA|UNCHARACTERIZED protein MJ0550|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GCVMARSGG 10
GC A+ GG
Sbjct: 59 GCYYAKEGG 67


>sp|HEM3_METKA|PROBABLE porphobilinogen deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 RGCVMARSGG 10
R C+++R GG
Sbjct: 105 RECLVSRHGG 114




7|SequenceR|40|31|AGSLQRGCVM

>sp|COFG_METPE|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 LQRGCVM 10
+Q+GC+M
Sbjct: 33 IQKGCIM 39


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 4 LQRGCVM 10
+Q GCVM
Sbjct: 33 VQEGCVM 39




8|SequenceR|45|36|LTESGAGSLQ

>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LTESGAGSL 9
LT+SG GS+
Sbjct: 54 LTDSGTGSM 62


>sp|HIS4_METVO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus voltae

Query: 1 LTESGAGSL 9
L E GAGS+
Sbjct: 156 LEEKGAGSI 164


>sp|HIS4_META3|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus aeolicus (strain

Query: 1 LTESGAGSL 9
L E GAGS+
Sbjct: 157 LEEKGAGSI 165




9|SequenceR|50|41|TRRQKLTESG

>sp|RL18E_PYRHO|LARGE ribosomal subunit protein eL18|Pyrococcus horikoshii (strain ATCC

Query: 1 TRRQKLTESG 10
T R+K+TE+G
Sbjct: 88 TARKKITEAG 97


>sp|NADE_METTH|NH(3)-DEPENDENT NAD(+) synthetase|Methanothermobacter thermautotrophicus (strain

Query: 3 RQKLTESG 10
RQK+ ESG
Sbjct: 20 RQKVAESG 27




10|SequenceR|55|46|RSMIQTRRQK

***** No hits found ******


11|SequenceR|60|51|QKPLGRSMIQ

>sp|HEM3_AERPE|PROBABLE porphobilinogen deaminase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KPLGRSMIQ 10
+PLGRSM++
Sbjct: 249 EPLGRSMVR 257


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 QKPLGRSMIQ 10
+KPLG+ +I+
Sbjct: 206 EKPLGKDVIE 215


>sp|ARCC_THEVO|CARBAMATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QKPLGR 6
QKPLGR
Sbjct: 240 QKPLGR 245


>sp|Y1164_METJA|PUTATIVE HTH-type transcriptional regulatory protein|Methanocaldococcus

Query: 2 KPLGRS 7
KPLGRS
Sbjct: 25 KPLGRS 30


>sp|RIBB_METLZ|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanocorpusculum labreanum (strain ATCC

Query: 3 PLGRSMIQ 10
P+GRS+++
Sbjct: 60 PMGRSLVE 67




12|SequenceR|65|56|GEIPKQKPLG

>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GEIPKQKPLG 10
G+ PK+KP G
Sbjct: 57 GQFPKRKPKG 66


>sp|EHAA_METJA|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex membrane|Methanocaldococcus

Query: 3 IPKQKPL 9
IPK+KP+
Sbjct: 37 IPKEKPI 43


>sp|ARCC_THEVO|CARBAMATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PKQKPLG 10
P QKPLG
Sbjct: 238 PDQKPLG 244


>sp|HISX_SULTO|HISTIDINOL dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EIPKQKP 8
E+PKQ+P
Sbjct: 5 ELPKQRP 11


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 1 GEIPKQKPL 9
G +P+++PL
Sbjct: 120 GSVPEREPL 128


>sp|GGGPS_METVS|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 EIPKQKP 8
EIP++KP
Sbjct: 147 EIPQKKP 153




13|SequenceR|70|61|IVQKVGEIPK

>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IVQKVGEIP 9
IV+K GEIP
Sbjct: 308 IVRKAGEIP 316


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 VQKVGEIP 9
V+K+GEIP
Sbjct: 269 VKKIGEIP 276


>sp|AATF_PYRHO|A-TYPE ATP synthase subunit F|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IVQKVGEIPK 10
+ QK+GE+P+
Sbjct: 58 LAQKIGELPQ 67


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IVQKVGEIP 9
+ QK+GEIP
Sbjct: 99 VAQKMGEIP 107


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 QKVGEIPK 10
++VGE+PK
Sbjct: 490 KRVGEVPK 497


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IVQKVGEIPK 10
+++KV EIP+
Sbjct: 391 VIEKVSEIPQ 400


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IVQKVGEIPK 10
+++KV EIP+
Sbjct: 391 VIEKVSEIPQ 400


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 QKVGEIPK 10
KVG+IPK
Sbjct: 97 DKVGKIPK 104


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 QKVGEIPK 10
+VGE+PK
Sbjct: 490 NRVGEMPK 497


>sp|RL11_AERPE|LARGE ribosomal subunit protein uL11|Aeropyrum pernix (strain ATCC

Query: 1 IVQKVGEIP 9
I QK+G++P
Sbjct: 29 IHQKIGDLP 37


>sp|AATF_PYRAB|A-TYPE ATP synthase subunit F|Pyrococcus abyssi (strain GE5 /

Query: 1 IVQKVGEIPK 10
+ Q++G++P+
Sbjct: 58 LAQRIGDLPQ 67




14|SequenceR|75|66|GSAVVIVQKV

***** No hits found ******


15|SequenceR|80|71|GVGGKGSAVV

>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 4 GKGSAVV 10
GKGSAV+
Sbjct: 616 GKGSAVI 622


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GGKGSAVV 10
GGKGSA++
Sbjct: 299 GGKGSAMI 306


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 2 VGGKGSAVV 10
VGGK A+V
Sbjct: 714 VGGKDKAIV 722


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 2 VGGKGSAVV 10
VGGK A+V
Sbjct: 814 VGGKDKAIV 822


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 2 VGGKGSAVV 10
VGGK A+V
Sbjct: 662 VGGKDKAIV 670


>sp|Y2030_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 2 VGGKGSAV 9
+GGKG A+
Sbjct: 276 IGGKGEAL 283


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 2 VGGKGSAVV 10
VGGK A+V
Sbjct: 654 VGGKDKAIV 662




16|SequenceR|85|76|ATTSKGVGGK

>sp|TRUD_PYRFU|PROBABLE tRNA pseudouridine synthase D|Pyrococcus furiosus (strain ATCC

Query: 2 TTSKGVGGK 10
TTS G+GGK
Sbjct: 12 TTSPGIGGK 20


>sp|TRUD_THESM|PROBABLE tRNA pseudouridine synthase D|Thermococcus sibiricus (strain DSM

Query: 2 TTSKGVGGK 10
++SKG+GGK
Sbjct: 14 SSSKGIGGK 22




17|SequenceR|90|81|LALNVATTSK

***** No hits found ******


18|SequenceR|95|86|NAALALALNV

>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 1 NAALALALNV 10
NAA+++ LNV
Sbjct: 58 NAAVSVGLNV 67


>sp|ARCH_PYRAE|PROTEIN archease|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NAALALA 7
NAALALA
Sbjct: 33 NAALALA 39


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 4 LALALNV 10
LALALNV
Sbjct: 817 LALALNV 823




19|SequenceR|100|91|AKSSDNAALA

>sp|MALE_THELN|TREHALOSE/MALTOSE-BINDING protein MalE|Thermococcus litoralis (strain ATCC 51850

Query: 1 AKSSDNAALA 10
+K SDN ALA
Sbjct: 340 SKYSDNKALA 349


>sp|TBP_METM7|TATA-BOX-BINDING protein|Methanococcus maripaludis (strain C7 /

Query: 1 AKSSDNAALA 10
AKS D+A +A
Sbjct: 66 AKSKDDAVIA 75




20|SequenceR|105|96|DLLGIAKSSD

>sp|PCNA_METBF|DNA polymerase sliding clamp|Methanosarcina barkeri (strain Fusaro /

Query: 1 DLLGIAKSSD 10
DLLGIA +D
Sbjct: 75 DLLGIADKND 84


>sp|Y376_METTP|UPF0282 protein Mthe_0376|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DLLGIAKSSD 10
D+ G+A+SSD
Sbjct: 58 DVRGLAESSD 67


>sp|PCNA_METMA|DNA polymerase sliding clamp|Methanosarcina mazei (strain ATCC

Query: 1 DLLGIAKSSD 10
DLLGIA +D
Sbjct: 75 DLLGIADRND 84


>sp|PCNA_METAC|DNA polymerase sliding clamp|Methanosarcina acetivorans (strain ATCC

Query: 1 DLLGIAKSSD 10
DLLGIA +D
Sbjct: 75 DLLGIADRND 84




21|SequenceR|110|101|GYVDVDLLGI

>sp|TYW3_SACS2|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 GYVDVDLLG 9
GY+D D+LG
Sbjct: 22 GYLDPDILG 30


>sp|MCH_METS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GYVDVDLL 8
GYV+VDLL
Sbjct: 308 GYVNVDLL 315


>sp|BPS2_ACIAM|PROTEIN bps2|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 GYVDVDLLG 9
GYV++DL G
Sbjct: 62 GYVELDLDG 70


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GYVDVDLL 8
G +DVDLL
Sbjct: 344 GKIDVDLL 351


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GYVDVDLL 8
G +DVDLL
Sbjct: 344 GKIDVDLL 351


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 DVDLLGI 10
DVDL+GI
Sbjct: 131 DVDLVGI 137


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 GYVDVDLL 8
G VDVD+L
Sbjct: 197 GLVDVDIL 204


>sp|LIPA_PYRAR|LIPOYL synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GYVDVD 6
GYVD+D
Sbjct: 76 GYVDLD 81


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DVDLLGI 10
D+DLLG+
Sbjct: 80 DLDLLGV 86


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 DVDLLGI 10
DVDL+G+
Sbjct: 131 DVDLVGV 137


>sp|ARGC_METVS|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GYVDVDLLGI 10
GY +LLGI
Sbjct: 11 GYTGSELLGI 20


>sp|Y1180_METJA|UNCHARACTERIZED protein MJ1180|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GYVDVDLLG 9
G VDV LLG
Sbjct: 103 GQVDVALLG 111




22|SequenceR|115|106|KPVSPGYVDV

>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 KPVSPGYV 8
KPVSPG+V
Sbjct: 18 KPVSPGFV 25


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PVSPGYVD 9
P+ PGYVD
Sbjct: 144 PMLPGYVD 151


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PVSPGYVD 9
PVSP YV+
Sbjct: 282 PVSPDYVN 289


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PVSPGYVD 9
P+ PGYVD
Sbjct: 144 PMLPGYVD 151


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PVSPGYVD 9
P+ PGYVD
Sbjct: 144 PMLPGYVD 151


>sp|PGK2_PYRAB|2-PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 VSPGYVDV 10
V PG+VDV
Sbjct: 197 VVPGFVDV 204


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PVSPGYVD 9
P+ PGYVD
Sbjct: 144 PMLPGYVD 151


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 1 KPVSPGYVDV 10
K VSPG+V++
Sbjct: 50 KVVSPGFVNL 59


>sp|COME_METTH|SULFOPYRUVATE decarboxylase subunit beta|Methanothermobacter thermautotrophicus

Query: 2 PVSPGYVDV 10
PV PG DV
Sbjct: 153 PVKPGNADV 161


>sp|Y862_METTH|UNCHARACTERIZED protein MTH_862|Methanothermobacter thermautotrophicus (strain

Query: 3 VSPGYVDV 10
+SPG VDV
Sbjct: 78 ISPGNVDV 85


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 PVSPGYV 8
PV PGY+
Sbjct: 4253 PVGPGYL 4259


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PVSPGYVD 9
P+ PG+VD
Sbjct: 144 PMLPGFVD 151


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VSPGYV 8
VSPGY+
Sbjct: 470 VSPGYI 475


>sp|DNAG_THEPD|DNA primase DnaG|Thermofilum pendens (strain DSM 2475

Query: 2 PVSPGYV 8
PVSP YV
Sbjct: 5 PVSPKYV 11


>sp|NUCS_PYRFU|ENDONUCLEASE NucS|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KPVSPGYVDV 10
KP+ G VDV
Sbjct: 154 KPIKHGIVDV 163


>sp|RS4_SULAC|SMALL ribosomal subunit protein uS4|Sulfolobus acidocaldarius (strain

Query: 1 KPVSPGYV 8
K SPGYV
Sbjct: 137 KVTSPGYV 144


>sp|AROD_METHJ|3-DEHYDROQUINATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 VSPGYVD 9
+SPG+VD
Sbjct: 221 LSPGFVD 227


>sp|CCA_THEVO|CCA-ADDING enzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KPVSPGYVD 9
KP+ P Y D
Sbjct: 259 KPIKPKYHD 267


>sp|MPGS_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PVSPGYVDV 10
P++P Y++V
Sbjct: 291 PIAPDYIEV 299


>sp|HUTI_HALSA|IMIDAZOLONEPROPIONASE salinarum (strain ATCC 700922

Query: 1 KPVSPGYVD 9
K V PG+VD
Sbjct: 67 KTVLPGFVD 75


>sp|HUTI_HALS3|IMIDAZOLONEPROPIONASE salinarum (strain ATCC 29341

Query: 1 KPVSPGYVD 9
K V PG+VD
Sbjct: 67 KTVLPGFVD 75


>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 SPGYVD 9
SPGYV+
Sbjct: 41 SPGYVE 46


>sp|AROD_METAR|3-DEHYDROQUINATE dehydratase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KPVSPGYVDV 10
+PV+PG + V
Sbjct: 197 RPVAPGQIRV 206


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PVSPGYV 8
P+SPG V
Sbjct: 50 PISPGVV 56


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain ATCC

Query: 5 PGYVDV 10
PGYV+V
Sbjct: 272 PGYVEV 277


>sp|APGM_SULAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 PVSPGYV 8
P+SPG V
Sbjct: 50 PISPGIV 56


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VSPGYVDV 10
V+P YVD+
Sbjct: 470 VNPKYVDI 477


>sp|NUCS_PYRAB|ENDONUCLEASE NucS|Pyrococcus abyssi (strain GE5 /

Query: 1 KPVSPGYVDV 10
KP+ G VDV
Sbjct: 152 KPIRHGIVDV 161




23|SequenceR|120|111|KLNMMKPVSP

>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 KLNMMKPVSP 10
K+ KPVSP
Sbjct: 13 KIEEFKPVSP 22


>sp|BIOD_METVS|ATP-DEPENDENT dethiobiotin synthetase BioD|Methanococcus vannielii (strain ATCC

Query: 2 LNMMKPVSP 10
+N+ KP+SP
Sbjct: 64 VNLKKPLSP 72


>sp|TRPD_METAC|ANTHRANILATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 NMMKPVSP 10
N +KPV+P
Sbjct: 67 NTIKPVTP 74


>sp|CAS6A_METJA|CRISPR-ASSOCIATED endoribonuclease Cas6 1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KLNMMKPVSP 10
K N++K +SP
Sbjct: 124 KFNILKTISP 133




24|SequenceR|125|116|LEPNGKLNMM

>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 2 EPNGKLNMM 10
+PNGKLN++
Sbjct: 166 KPNGKLNII 174


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 EPNGKLNMM 10
+PNGKL M+
Sbjct: 809 DPNGKLAMV 817


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LEPNGKLNMM 10
L PNG+LN++
Sbjct: 471 LPPNGELNVL 480


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EPNGKL 7
EPNGKL
Sbjct: 745 EPNGKL 750


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EPNGKL 7
EPNGKL
Sbjct: 743 EPNGKL 748


>sp|NIFK_METMP|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 2 EPNGKLNMM 10
E NGKLN++
Sbjct: 171 EENGKLNII 179


>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LEPNGKLN 8
L+P+GK+N
Sbjct: 104 LDPSGKVN 111


>sp|SYY_METMA|TYROSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EPNGKLNM 9
EP+GK++M
Sbjct: 37 EPSGKIHM 44


>sp|SYY_METBF|TYROSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EPNGKLNM 9
EP+GK++M
Sbjct: 37 EPSGKIHM 44


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 1 LEPNGKL 7
+EP+GKL
Sbjct: 211 IEPDGKL 217


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LEPNGKL 7
+EP+GKL
Sbjct: 208 IEPDGKL 214


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 1 LEPNGKL 7
+EP+GKL
Sbjct: 208 IEPDGKL 214


>sp|SYY_METBU|TYROSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 EPNGKLNM 9
EP+GK++M
Sbjct: 37 EPSGKIHM 44


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 1 LEPNGKL 7
+EP+GKL
Sbjct: 209 IEPDGKL 215


>sp|SYY_METAC|TYROSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EPNGKLNM 9
EP+GK++M
Sbjct: 37 EPSGKIHM 44


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 LEPNGKLNMM 10
+EP+ K+N+M
Sbjct: 101 VEPSNKINLM 110


>sp|Y1384_THEVO|PROTEIN TV1384|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LEPNGKL 7
+EPNGK+
Sbjct: 192 IEPNGKV 198


>sp|MNTP_METBF|MANGANESE exporter MntP|Methanosarcina barkeri (strain Fusaro /

Query: 2 EPNGKLNMM 10
+P+GK+N +
Sbjct: 92 DPDGKINSL 100


>sp|ASPD_METJA|L-ASPARTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EPNGKLN 8
+PN KLN
Sbjct: 210 DPNAKLN 216


>sp|Y541_PYRHO|UNCHARACTERIZED ATP-binding protein PH0541|Pyrococcus horikoshii (strain ATCC

Query: 1 LEPNGKLNMM 10
L P GKL ++
Sbjct: 304 LRPQGKLELL 313




25|SequenceR|130|121|LNSQSLEPNG

>sp|AATB_HALLT|A-TYPE ATP synthase subunit B|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LNSQSLEP 8
LNSQ L+P
Sbjct: 339 LNSQGLQP 346


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LNSQSLEP 8
LNSQ +EP
Sbjct: 339 LNSQGIEP 346


>sp|IDI_HALMA|ISOPENTENYL-DIPHOSPHATE Delta-isomerase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LNSQSLEPN 9
L+ SLEPN
Sbjct: 138 LHDTSLEPN 146


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 1 LNSQSLEP 8
LNSQ ++P
Sbjct: 338 LNSQGIQP 345




26|SequenceR|135|126|LLPRMLNSQS

>sp|TRUA_ARCFU|TRNA pseudouridine synthase A|Archaeoglobus fulgidus (strain ATCC

Query: 1 LLPRMLNSQ 9
+ PRMLN++
Sbjct: 70 IFPRMLNAE 78


>sp|CYSO_AERPE|PROTEIN CysO|Aeropyrum pernix (strain ATCC 700893

Query: 1 LLPRMLNSQ 9
LLPR+L +Q
Sbjct: 185 LLPRLLGAQ 193




27|SequenceR|140|131|AIGYNLLPRM

>sp|FLAB2_METJA|FLAGELLIN B2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AIGYNLLPR 9
A+G NL+PR
Sbjct: 174 AVGLNLVPR 182


>sp|SYFB_PYRAE|PHENYLALANINE--TRNA ligase beta subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IGYNLLPR 9
+GYN +PR
Sbjct: 327 MGYNQMPR 334


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AIGYNLLPR 9
A G N+LPR
Sbjct: 802 AFGVNVLPR 810


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 1 AIGYNLLPRM 10
AIGYNL M
Sbjct: 395 AIGYNLTDNM 404


>sp|SYY_METLZ|TYROSINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 YNLLPRM 10
YN+ PRM
Sbjct: 250 YNVFPRM 256


>sp|SELB_METJA|SELENOCYSTEINE-SPECIFIC elongation factor|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YNLLPRM 10
YNL P+M
Sbjct: 295 YNLAPKM 301


>sp|ACDG_METKA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanopyrus

Query: 4 YNLLPR 9
YNLLP+
Sbjct: 10 YNLLPK 15


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 1 AIGYNLLPRM 10
A+G ++LPR+
Sbjct: 390 AVGGDILPRI 399


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 1 AIGYNLLPRM 10
A+G +LPR+
Sbjct: 390 AVGAEILPRI 399


>sp|HIS81_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IGYNLLP 8
IGY LLP
Sbjct: 191 IGYALLP 197


>sp|PCNA_METBU|DNA polymerase sliding clamp|Methanococcoides burtonii (strain DSM 6242

Query: 2 IGYNLLPRM 10
IGY L PR+
Sbjct: 234 IGYLLAPRI 242


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 1 AIGYNLLPRM 10
A+G +LPR+
Sbjct: 394 AVGAEILPRI 403


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 2 IGYNLLP 8
IG+N+LP
Sbjct: 248 IGHNVLP 254


>sp|PCNA_METLZ|DNA polymerase sliding clamp|Methanocorpusculum labreanum (strain ATCC

Query: 1 AIGYNLLPRM 10
++GY L PR+
Sbjct: 235 SVGYLLAPRI 244


>sp|REG6_PYRFU|HTH-TYPE transcriptional regulator FL11|Pyrococcus furiosus (strain ATCC

Query: 1 AIGYNLL 7
A+GYN+L
Sbjct: 62 ALGYNIL 68


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AIGYNLLPR 9
AIGYN++ +
Sbjct: 168 AIGYNVVKK 176


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 1 AIGYNL 6
A+GYNL
Sbjct: 324 AVGYNL 329


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GYNLLPR 9
GY LLP+
Sbjct: 435 GYKLLPK 441


>sp|KDPC_THEVO|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 AIGYNL 6
AIGYNL
Sbjct: 72 AIGYNL 77


>sp|TRPD_PYRAE|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AIGYNL 6
A+GYNL
Sbjct: 126 AVGYNL 131


>sp|TRPD_PYRIL|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AIGYNL 6
A+GYNL
Sbjct: 124 AVGYNL 129


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 AIGYNL 6
A+GYNL
Sbjct: 126 AVGYNL 131




28|SequenceR|145|136|GMSMCAIGYN

>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 1 GMSMCAIGYN 10
G +CAIGY+
Sbjct: 324 GAIICAIGYD 333


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 GMSMCAIGYN 10
G +CA+GY+
Sbjct: 321 GTIICAVGYD 330


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 1 GMSMCAIGY 9
G ++C IGY
Sbjct: 17 GKTVCIIGY 25


>sp|Y1434_ARCFU|UNCHARACTERIZED protein AF_1434|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GMSMCAIGY 9
G+ +C IGY
Sbjct: 24 GLILCFIGY 32




29|SequenceR|150|141|EEVLFGMSMC

>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EEVLFGMSMC 10
EE ++G MC
Sbjct: 444 EECIYGTRMC 453


>sp|NADK_METAC|NAD kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EEVLFGMS 8
EEVL+G S
Sbjct: 108 EEVLYGFS 115


>sp|NADK_METBF|NAD kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EEVLFGMS 8
EEVL+G S
Sbjct: 108 EEVLYGFS 115


>sp|Y1386_ARCFU|UNCHARACTERIZED protein AF_1386|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LFGMSMC 10
LFGM++C
Sbjct: 72 LFGMTIC 78


>sp|NADK_METMA|NAD kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EEVLFGMS 8
EEVL+G S
Sbjct: 122 EEVLYGFS 129




30|SequenceR|155|146|VVPESEEVLF

>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 1 VVPESEEVLF 10
V PE++E+LF
Sbjct: 323 VTPEADEILF 332


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VVPESEEVLF 10
V PE++E+LF
Sbjct: 323 VTPEADEILF 332


>sp|DHE3_PYREN|GLUTAMATE dehydrogenase|Pyrococcus endeavori

Query: 1 VVPESEEVLF 10
V PE++E+LF
Sbjct: 323 VTPEADEILF 332


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 VVPESEEVLF 10
V PE++E+LF
Sbjct: 323 VTPEADEILF 332


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVPESEEVLF 10
V PE++E+LF
Sbjct: 323 VTPEADEILF 332


>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VVPESEEVLF 10
+VP+SE +LF
Sbjct: 231 LVPDSEIILF 240


>sp|RL18_AERPE|LARGE ribosomal subunit protein uL18|Aeropyrum pernix (strain ATCC 700893

Query: 2 VPESEEVL 9
+P SEE+L
Sbjct: 131 IPHSEEIL 138


>sp|MPTA_THEVO|GTP cyclohydrolase MptA|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VPESEEVLF 10
+P+SE VL+
Sbjct: 157 IPDSENVLY 165


>sp|GGGPS_NITMS|GERANYLGERANYLGLYCERYL phosphate synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VVPESEEVLF 10
VVP+++ +LF
Sbjct: 88 VVPDADAILF 97


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VVPESEEVL 9
V PE++E+L
Sbjct: 324 VTPEADEIL 332


>sp|RL18_HYPBU|LARGE ribosomal subunit protein uL18|Hyperthermus butylicus (strain DSM

Query: 2 VPESEEVL 9
+P SEEVL
Sbjct: 131 IPHSEEVL 138


>sp|CETZ5_HALVD|TUBULIN-LIKE protein CetZ5|Haloferax volcanii (strain ATCC 29605

Query: 1 VVPESEEVLF 10
+VPE +LF
Sbjct: 49 LVPEENRILF 58


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 3 PESEEVLF 10
PE++E+L+
Sbjct: 324 PEADEILY 331


>sp|SYT_THEON|THREONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 VVPESEEVL 9
V+P SEEVL
Sbjct: 517 VIPVSEEVL 525


>sp|Y758_METJA|UNCHARACTERIZED protein MJ0758|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVPESEE 7
VVPE+EE
Sbjct: 144 VVPETEE 150


>sp|RL18_META3|LARGE ribosomal subunit protein uL18|Methanococcus aeolicus (strain ATCC

Query: 2 VPESEEVL 9
+P SEE+L
Sbjct: 130 IPHSEEIL 137


>sp|RL18_ARCFU|LARGE ribosomal subunit protein uL18|Archaeoglobus fulgidus (strain ATCC

Query: 2 VPESEEVL 9
VP S+EVL
Sbjct: 132 VPHSDEVL 139


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VVPESEEV 8
++PE EEV
Sbjct: 410 ILPEQEEV 417


>sp|KUP_METAC|PROBABLE potassium transport system protein|Methanosarcina acetivorans

Query: 3 PESEEVLF 10
PES+ +LF
Sbjct: 267 PESKNILF 274




31|SequenceR|160|151|MLGRWVVPES

>sp|ENDA_THEON|TRNA-SPLICING endonuclease|Thermococcus onnurineus (strain NA1)

Query: 5 WVVPES 10
WVVPE+
Sbjct: 123 WVVPEN 128


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 3 GRWVVP 8
G+WV+P
Sbjct: 171 GKWVIP 176


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WVVPES 10
WVVP S
Sbjct: 329 WVVPSS 334


>sp|ENDA_THEKO|TRNA-SPLICING endonuclease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 WVVPES 10
WVVPE+
Sbjct: 120 WVVPEN 125


>sp|RL3_METB6|LARGE ribosomal subunit protein uL3|Methanoregula boonei (strain DSM

Query: 4 RWVVPES 10
RW VP+S
Sbjct: 247 RWEVPQS 253


>sp|GLMM_THEON|PROBABLE phosphoglucosamine mutase|Thermococcus onnurineus (strain NA1)

Query: 3 GRWVVPE 9
G W++P+
Sbjct: 319 GTWIIPQ 325


>sp|THTR_METTH|PUTATIVE thiosulfate sulfurtransferase|Methanothermobacter

Query: 4 RWVVPE 9
RWV PE
Sbjct: 12 RWVTPE 17


>sp|GLMM_THEKO|PROBABLE phosphoglucosamine mutase|Thermococcus kodakarensis (strain ATCC

Query: 3 GRWVVPE 9
G W++P+
Sbjct: 319 GTWIIPQ 325


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LGRWVVPES 10
+GRW+V +
Sbjct: 1 MGRWIVASA 9




32|SequenceR|165|156|IASMVMLGRW

>sp|POK_THEKO|PANTOATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ASMVMLGR 9
+SM+MLG+
Sbjct: 251 SSMIMLGK 258




33|SequenceR|170|161|RLLKEIASMV

>sp|SYFA_SULAC|PHENYLALANINE--TRNA ligase alpha subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RLLKEIASM 9
RLLKEI M
Sbjct: 277 RLLKEIKEM 285




34|SequenceR|175|166|GWDVQRLLKE

>sp|G1PDH_PYRFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GWDVQRLLKE 10
G DV+R+LKE
Sbjct: 46 GKDVERVLKE 55


>sp|RNZ_METS5|RIBONUCLEASE Z|Metallosphaera sedula (strain ATCC 51363

Query: 2 WDVQRLLKE 10
W V R+LKE
Sbjct: 162 WRVMRMLKE 170


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 GWDVQRLL 8
GW+VQR L
Sbjct: 475 GWEVQRHL 482


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 GWDVQRLL 8
GW+VQR L
Sbjct: 475 GWEVQRHL 482


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 GWDVQRLLKE 10
GW V+R L E
Sbjct: 412 GWTVERQLME 421


>sp|HPRT_METPS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocella paludicola (strain DSM 17711

Query: 1 GWDVQRLLK 9
G+DVQ L+K
Sbjct: 164 GYDVQTLIK 172


>sp|PFDA_PYRAE|PREFOLDIN subunit alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DVQRLLKE 10
DVQRLL+E
Sbjct: 5 DVQRLLEE 12


>sp|PFDA_PYRIL|PREFOLDIN subunit alpha|Pyrobaculum islandicum (strain DSM 4184

Query: 3 DVQRLLKE 10
DVQRLL+E
Sbjct: 5 DVQRLLEE 12


>sp|GCK_PYRHO|GLYCERATE 2-kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GWDVQRLLKE 10
G DV+++LKE
Sbjct: 393 GIDVEKVLKE 402


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 WDVQRLLKE 10
W+++RLL++
Sbjct: 228 WEIKRLLEK 236


>sp|FTSZ2_PYRFU|CELL division protein FtsZ 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WDVQRLLK 9
W +QRLL+
Sbjct: 179 WGIQRLLE 186


>sp|PFDA_PYRCJ|PREFOLDIN subunit alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 DVQRLLKE 10
D+QRLL+E
Sbjct: 7 DIQRLLEE 14


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 GWDVQRLLKE 10
GW+ + +LKE
Sbjct: 930 GWEKKNILKE 939


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DVQRLLKE 10
DVQRL++E
Sbjct: 857 DVQRLIQE 864


>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 WDVQRL 7
WD+QRL
Sbjct: 117 WDLQRL 122


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 1 GWDVQRLLKE 10
G+DV+R++ E
Sbjct: 140 GFDVERIVNE 149


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 1 GWDVQRLLKE 10
G+DV+R++ E
Sbjct: 140 GFDVERIVNE 149


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 2 WDVQRL 7
WD++RL
Sbjct: 117 WDIERL 122


>sp|RNZ_SACI7|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 WDVQRLLKE 10
W V R LKE
Sbjct: 163 WRVMRKLKE 171


>sp|RNZ_SACI6|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.4 /

Query: 2 WDVQRLLKE 10
W V R LKE
Sbjct: 163 WRVMRKLKE 171


>sp|RNZ_SACI4|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.14.25 /

Query: 2 WDVQRLLKE 10
W V R LKE
Sbjct: 163 WRVMRKLKE 171


>sp|RNZ_SACI3|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 WDVQRLLKE 10
W V R LKE
Sbjct: 163 WRVMRKLKE 171


>sp|RNZ_SACI2|RIBONUCLEASE Z|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 WDVQRLLKE 10
W V R LKE
Sbjct: 163 WRVMRKLKE 171


>sp|RNZ_SACI1|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 WDVQRLLKE 10
W V R LKE
Sbjct: 163 WRVMRKLKE 171


>sp|RNZ_SULTO|RIBONUCLEASE Z|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WDVQRLLKE 10
W + R+LKE
Sbjct: 162 WRIIRMLKE 170


>sp|SYH_KORCO|HISTIDINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GWDVQRLLKE 10
W + R+L+E
Sbjct: 350 AWRISRILRE 359


>sp|PELO_ARCFU|PROTEIN pelota homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WDVQRLLKE 10
WDV LL+E
Sbjct: 299 WDVDGLLRE 307


>sp|PGK2_METJA|2-PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GWDVQRLLKE 10
WD+ +LK+
Sbjct: 41 AWDIYEMLKK 50




35|SequenceR|180|171|LYDLQGWDVQ

>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LYDLQGWDV 9
LYD GWDV
Sbjct: 306 LYDHMGWDV 314


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LYDLQGWDVQ 10
L +++GWDV+
Sbjct: 693 LVEIEGWDVE 702


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 2 YDLQGWD 8
Y LQGWD
Sbjct: 343 YILQGWD 349


>sp|SYS_KORCO|SERINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 YDLQGW 7
YDL+GW
Sbjct: 356 YDLEGW 361


>sp|AATC_DESSY|A-TYPE ATP synthase subunit C|Desulfurococcus sp. (strain SY)

Query: 4 LQGWDVQ 10
L+GWDV+
Sbjct: 120 LEGWDVR 126


>sp|Y1873_ARCFU|UNCHARACTERIZED protein AF_1873|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LYDLQGW 7
L DLQGW
Sbjct: 346 LGDLQGW 352


>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 2 YDLQGWD 8
Y L+GWD
Sbjct: 586 YKLRGWD 592


>sp|TRM56_METBU|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcoides burtonii

Query: 1 LYDLQGWDV 9
+YDL W+V
Sbjct: 117 IYDLADWNV 125


>sp|Y1570_METJA|UNCHARACTERIZED protein MJ1570|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YDLQGWD 8
YD+ GWD
Sbjct: 71 YDIPGWD 77


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 LYDLQGW 7
LY+LQ W
Sbjct: 122 LYELQKW 128


>sp|Y014_METJA|UNCHARACTERIZED protein MJ0014|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 GWDVQ 10
GWD+Q
Sbjct: 94 GWDIQ 98


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 QGWDVQ 10
QGWD Q
Sbjct: 121 QGWDTQ 126


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 QGWDVQ 10
QGWD Q
Sbjct: 95 QGWDTQ 100


>sp|HEM1_METM5|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C5 /

Query: 1 LYDLQGWDV 9
L D QG+DV
Sbjct: 58 LKDFQGFDV 66


>sp|COFG_METJA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYDLQGW 7
LYDL+ W
Sbjct: 116 LYDLEEW 122


>sp|SYS2_METKA|TYPE-2 serine--tRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 LYDLQGW 7
LYD GW
Sbjct: 340 LYDCSGW 346


>sp|BACR2_HALMA|BACTERIORHODOPSIN-II marismortui (strain ATCC 43049

Query: 5 QGWDVQ 10
+GWDVQ
Sbjct: 35 KGWDVQ 40


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 QGWDVQ 10
QGWD Q
Sbjct: 112 QGWDTQ 117


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 LYDLQGW 7
LYD GW
Sbjct: 303 LYDHMGW 309


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LYDLQGWDV 9
+YD GW++
Sbjct: 316 VYDYMGWEM 324


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 LYDLQGW 7
+Y+LQ W
Sbjct: 121 IYELQNW 127


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 LYDLQGW 7
+Y+LQ W
Sbjct: 122 IYELQNW 128


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 LYDLQGW 7
+Y+LQ W
Sbjct: 122 IYELQNW 128


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 LYDLQGW 7
+Y+LQ W
Sbjct: 122 IYELQNW 128


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 LYDLQGW 7
+Y+LQ W
Sbjct: 122 IYELQNW 128


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 LYDLQGW 7
+Y+LQ W
Sbjct: 122 IYELQNW 128


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 LYDLQGW 7
+Y+LQ W
Sbjct: 122 IYELQNW 128


>sp|EF1B_STAMF|ELONGATION factor 1-beta|Staphylothermus marinus (strain ATCC 43588

Query: 2 YDLQGWDVQ 10
Y+++G+D++
Sbjct: 34 YEIKGYDIE 42


>sp|SYS_METST|SERINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YDLQGW 7
YDL+ W
Sbjct: 333 YDLEAW 338


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 YDLQGW 7
YDL+ W
Sbjct: 359 YDLEAW 364


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LYDLQGW 7
LYD GW
Sbjct: 314 LYDHMGW 320


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 3 DLQGWDVQ 10
DL+ WD++
Sbjct: 53 DLRSWDMK 60


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LYDLQGWDVQ 10
+ +++ WDVQ
Sbjct: 706 ILNIEDWDVQ 715


>sp|Y049_PYRAE|UNCHARACTERIZED serpin-like protein PAE0049|Pyrobaculum aerophilum (strain ATCC

Query: 5 QGWDVQ 10
+GWDV+
Sbjct: 150 EGWDVR 155


>sp|AATC_METST|A-TYPE ATP synthase subunit C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YDLQGWDVQ 10
Y L+GW ++
Sbjct: 275 YQLRGWKLK 283


>sp|GYAR_AERPE|GLYOXYLATE reductase|Aeropyrum pernix (strain ATCC 700893

Query: 2 YDLQGWD 8
YD++ WD
Sbjct: 24 YDVEVWD 30


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YDLQGWDVQ 10
YD+ G+D++
Sbjct: 24 YDVVGYDIR 32


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YDLQGW 7
YDL+ W
Sbjct: 353 YDLEAW 358


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 2 YDLQGWD 8
+DL GW+
Sbjct: 464 FDLMGWE 470


>sp|TRM56_METTP|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanothrix thermoacetophila

Query: 1 LYDLQGWDV 9
+YD+ W+V
Sbjct: 116 VYDIADWNV 124


>sp|DPHB_METKA|DIPHTHINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 5 QGWDVQ 10
+GWDV+
Sbjct: 106 RGWDVE 111


>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 YDLQGW 7
YDL+ W
Sbjct: 358 YDLEAW 363


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LYDLQGWDVQ 10
L +++ WD++
Sbjct: 699 LIEIENWDIE 708


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 LYDLQGWD 8
+YD GW+
Sbjct: 314 IYDYFGWE 321


>sp|SYE_HALSA|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 DLQGWD 8
+L+GWD
Sbjct: 361 ELEGWD 366


>sp|SYE_HALS3|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 DLQGWD 8
+L+GWD
Sbjct: 361 ELEGWD 366




36|SequenceR|185|176|PMDVVLYDLQ

>sp|RS4E_PYRIL|SMALL ribosomal subunit protein eS4|Pyrobaculum islandicum (strain DSM

Query: 3 DVVLYDLQ 10
D VLYDLQ
Sbjct: 157 DTVLYDLQ 164


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 2 MDVVLYD 8
MDVVLYD
Sbjct: 252 MDVVLYD 258


>sp|TOP6A_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PMDVVLYDL 9
P D+V YDL
Sbjct: 283 PTDIVKYDL 291


>sp|KCY_METKA|CYTIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 PMDVVLYDL 9
P D+ LYDL
Sbjct: 156 PTDLSLYDL 164


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PMDVVLYD 8
P DVV YD
Sbjct: 250 PRDVVTYD 257


>sp|NIFH2_METTL|NITROGENASE iron protein 2|Methanothermococcus thermolithotrophicus

Query: 2 MDVVLYDL 9
+D+VLYD+
Sbjct: 129 LDIVLYDV 136


>sp|BRIX_SACS2|PROBABLE Brix domain-containing ribosomal biogenesis|Saccharolobus

Query: 1 PMDVVLYDLQ 10
P+ +++YDL+
Sbjct: 69 PLRIIVYDLE 78


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 2 MDVVLYD 8
+DV+LYD
Sbjct: 248 LDVILYD 254


>sp|IF2P_METAC|PROBABLE translation initiation factor IF-2|Methanosarcina acetivorans

Query: 2 MDVVLYD 8
+DV+LYD
Sbjct: 257 LDVILYD 263


>sp|IF2P_METBF|PROBABLE translation initiation factor IF-2|Methanosarcina barkeri (strain

Query: 2 MDVVLYD 8
+DV+LYD
Sbjct: 251 LDVILYD 257


>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 2 MDVVLYD 8
+DV+LYD
Sbjct: 261 LDVILYD 267


>sp|RL4_NANEQ|LARGE ribosomal subunit protein uL4|Nanoarchaeum equitans (strain

Query: 2 MDVVLYDLQ 10
M+V LY+LQ
Sbjct: 1 MEVPLYNLQ 9


>sp|NIFH2_METTH|NITROGENASE iron protein 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 MDVVLYDL 9
+DVV+YD+
Sbjct: 113 IDVVIYDV 120


>sp|TOP6A_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 1 PMDVVLYDL 9
P D+V YDL
Sbjct: 289 PQDIVDYDL 297


>sp|TOP6A_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 1 PMDVVLYDL 9
P D+V YDL
Sbjct: 289 PQDIVDYDL 297


>sp|NIFH_METJA|NITROGENASE iron protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DVVLYDL 9
DVV+YD+
Sbjct: 118 DVVIYDI 124


>sp|TOP6A_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PMDVVLYDL 9
P D+V YDL
Sbjct: 291 PADIVEYDL 299


>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PMDVVLYDL 9
P D++ YDL
Sbjct: 288 PQDIIDYDL 296


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PMDVVLYD 8
P+D++L+D
Sbjct: 415 PIDLILHD 422


>sp|SUMT_METIV|UROPORPHYRINOGEN-III C-methyltransferase|Methanobacterium ivanovii

Query: 3 DVVLYD 8
DVVLYD
Sbjct: 28 DVVLYD 33


>sp|IF2P_METMA|PROBABLE translation initiation factor IF-2|Methanosarcina mazei (strain

Query: 2 MDVVLYD 8
+D++LYD
Sbjct: 251 LDIILYD 257


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 2 MDVVLYD 8
+DVVLYD
Sbjct: 277 VDVVLYD 283


>sp|NIFH_METVO|NITROGENASE iron protein|Methanococcus voltae

Query: 3 DVVLYDL 9
DVV+YD+
Sbjct: 118 DVVIYDI 124


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 PMDVVLYD 8
P++V++YD
Sbjct: 467 PLEVLVYD 474


>sp|RS4E_PYRNV|SMALL ribosomal subunit protein eS4|Pyrobaculum neutrophilum (strain DSM

Query: 3 DVVLYDLQ 10
D VLYDL+
Sbjct: 157 DSVLYDLK 164


>sp|RS4E_PYRAR|SMALL ribosomal subunit protein eS4|Pyrobaculum arsenaticum (strain DSM

Query: 3 DVVLYDLQ 10
D +LYDL+
Sbjct: 157 DTILYDLE 164


>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 2 MDVVLYD 8
+D+VLYD
Sbjct: 259 LDIVLYD 265


>sp|RS4E_PYRAE|SMALL ribosomal subunit protein eS4|Pyrobaculum aerophilum (strain ATCC

Query: 3 DVVLYDLQ 10
D VLYDL+
Sbjct: 157 DSVLYDLR 164


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 3 DVVLYD 8
DV+LYD
Sbjct: 253 DVILYD 258




37|SequenceR|190|181|DGTGPPMDVV

>sp|RLME_HALMA|RIBOSOMAL RNA large subunit methyltransferase|Haloarcula marismortui (strain

Query: 1 DGTGPPMDVV 10
DG+G P+DVV
Sbjct: 106 DGSGGPVDVV 115


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 1 DGTGPPMD 8
DGTG P+D
Sbjct: 96 DGTGKPID 103


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 GTGPPMDVV 10
GT P MDVV
Sbjct: 364 GTKPTMDVV 372


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 2 GTGPPMDVV 10
GT P MDVV
Sbjct: 364 GTKPTMDVV 372


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 1 DGTGPPMD 8
DGTG P+D
Sbjct: 89 DGTGQPID 96


>sp|CCA_THEAC|CCA-ADDING enzyme|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 TGPPMD 8
TGPP+D
Sbjct: 338 TGPPVD 343


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DGTGPPMD 8
DGT PP +
Sbjct: 298 DGTPPPAE 305


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 DGTGP 5
DGTGP
Sbjct: 23 DGTGP 27


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DGTGPPMD 8
DG+G P+D
Sbjct: 89 DGSGQPID 96


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 DGTGPPMDV 9
+GTG P+ V
Sbjct: 65 EGTGAPLSV 73


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 DGTGPPMD 8
DG+G P+D
Sbjct: 89 DGSGQPID 96


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 DGTGPPMDV 9
+GTG P+ V
Sbjct: 65 EGTGAPLSV 73


>sp|RPO3_METS3|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanobrevibacter smithii (strain ATCC

Query: 1 DGTGPPMDVV 10
DG+ PP +V+
Sbjct: 242 DGSMPPKEVL 251


>sp|AATB_HALLT|A-TYPE ATP synthase subunit B|Halorubrum lacusprofundi (strain ATCC

Query: 1 DGTGPPMD 8
DG+G P+D
Sbjct: 89 DGSGRPID 96




38|SequenceR|195|186|VSLQVDGTGP

>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LQVDGTG 9
L+VDGTG
Sbjct: 255 LKVDGTG 261


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VSLQVDGTGP 10
+ ++VDG GP
Sbjct: 189 IYVRVDGDGP 198


>sp|G3P_HALSA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LQVDGTGP 10
L +DGTGP
Sbjct: 254 LGIDGTGP 261


>sp|G3P_HALS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 3 LQVDGTGP 10
L +DGTGP
Sbjct: 254 LGIDGTGP 261


>sp|HIS7_METTH|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VSLQVDGTG 9
V L++DG+G
Sbjct: 20 VDLEIDGSG 28


>sp|KTHY_THEVO|PROBABLE thymidylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LQVDGTGP 10
++VDGT P
Sbjct: 165 IKVDGTDP 172


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 VSLQVDGTG 9
VSL DGTG
Sbjct: 7579 VSLDSDGTG 7587


>sp|PGP_PYRFU|PHOSPHOGLYCOLATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VSLQVDGT 8
+SL +DGT
Sbjct: 6 ISLDIDGT 13


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 3 LQVDGTG 9
++VDGTG
Sbjct: 167 VEVDGTG 173


>sp|HPPA1_METAC|PUTATIVE K(+)-stimulated pyrophosphate-energized sodium pump|Methanosarcina

Query: 1 VSLQVDGTGP 10
+SL VD GP
Sbjct: 421 ISLSVDAYGP 430


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 1 VSLQVDGTGP 10
+SL VD GP
Sbjct: 421 ISLSVDAYGP 430




39|SequenceR|200|191|PINQSVSLQV

>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 1 PINQSVSLQV 10
P NQ + LQ+
Sbjct: 254 PYNQKIYLQI 263


>sp|HDRB1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina acetivorans

Query: 2 INQSVSLQV 10
+N+S SLQV
Sbjct: 222 LNKSTSLQV 230




40|SequenceR|205|196|VAGTIPINQS

>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 VAGTIPI 7
VAGT+P+
Sbjct: 255 VAGTVPL 261


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 AGTIPINQ 9
AGTI +NQ
Sbjct: 1282 AGTITLNQ 1289


>sp|DLDH_HALSA|DIHYDROLIPOYL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VAGTIPINQS 10
V GT P N S
Sbjct: 380 VVGTFPFNAS 389




41|SequenceR|210|201|PTSVIVAGTI

>sp|HACB2_METAC|METHANOGEN homoaconitase small subunit 2|Methanosarcina acetivorans (strain

Query: 1 PTSVIVAGT 9
P +IVAGT
Sbjct: 53 PGDIIVAGT 61




42|SequenceR|215|206|LAIDQPTSVI

>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LAIDQPTSV 9
L ID+PT V
Sbjct: 810 LPIDEPTKV 818


>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 1 LAIDQPTS 8
LA+D+PT+
Sbjct: 854 LALDEPTA 861


>sp|SRP19_CALMQ|SIGNAL recognition particle 19 kDa|Caldivirga maquilingensis (strain

Query: 1 LAIDQPT 7
LA+D+PT
Sbjct: 30 LAVDKPT 36


>sp|Y870_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 LAIDQPTS 8
+ +DQPTS
Sbjct: 228 IVLDQPTS 235




43|SequenceR|220|211|KHADMLAIDQ

>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KHADMLA 7
+HADMLA
Sbjct: 230 RHADMLA 236


>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KHADMLAIDQ 10
KH DM+ D+
Sbjct: 405 KHGDMVMFDK 414


>sp|NTPTH_SACS2|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 ADMLAIDQ 10
AD+LAID+
Sbjct: 104 ADVLAIDE 111


>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 1 KHADMLAIDQ 10
+HAD++ +D+
Sbjct: 118 EHADIIIVDE 127


>sp|NTPTH_HYPBU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Hyperthermus butylicus (strain DSM 5456

Query: 3 ADMLAIDQ 10
AD++AID+
Sbjct: 98 ADLIAIDE 105


>sp|RL10_METST|LARGE ribosomal subunit protein uL10|Methanosphaera stadtmanae (strain

Query: 3 ADMLAIDQ 10
AD+LAID+
Sbjct: 198 ADVLAIDE 205


>sp|RL11_HALMA|LARGE ribosomal subunit protein uL11|Haloarcula marismortui (strain ATCC

Query: 1 KHADMLAID 9
KH D+L+ D
Sbjct: 108 KHPDLLSYD 116




44|SequenceR|225|216|FMEAGKHADM

>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 1 FMEAGKHA 8
F E+GKHA
Sbjct: 180 FAESGKHA 187


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 2 MEAGKHADM 10
M AG+H D+
Sbjct: 676 MNAGRHTDI 684


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 3 EAGKHAD 9
EAG+HAD
Sbjct: 179 EAGRHAD 185


>sp|FWDD_METJA|PROTEIN FwdD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MEAGKHADM 10
MEAGK+ D+
Sbjct: 17 MEAGKNLDL 25


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 MEAGKHADM 10
+E+GK AD+
Sbjct: 694 IESGKRADL 702


>sp|TFE_METMJ|TRANSCRIPTION factor E|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FMEAGKHAD 9
F E G+H+D
Sbjct: 32 FPEGGEHSD 40


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 EAGKHADM 10
EAG +ADM
Sbjct: 203 EAGLYADM 210


>sp|PDXT_META3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus aeolicus (strain

Query: 1 FMEAGKHADM 10
F+EA K+AD+
Sbjct: 60 FIEALKNADL 69


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 1 FMEAGKHADM 10
F A KHAD+
Sbjct: 256 FSYAAKHADV 265


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FMEAGKHADM 10
F A KHAD+
Sbjct: 254 FSYAAKHADV 263


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 FMEAGKHADM 10
F A KHAD+
Sbjct: 254 FSYAAKHADV 263


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 FMEAGKHADM 10
F A KHAD+
Sbjct: 254 FSYAAKHADV 263


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 1 FMEAGKHADM 10
F A KHAD+
Sbjct: 255 FSYASKHADV 264


>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FMEAGKHADM 10
F A KHAD+
Sbjct: 254 FSYAAKHADV 263




45|SequenceR|230|221|VHVRRFMEAG

>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VRRFMEAG 10
VR+F+EAG
Sbjct: 185 VRKFVEAG 192


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 1 VHVRRFMEAG 10
VH R+F+E G
Sbjct: 527 VHPRKFIEEG 536


>sp|PHAC_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula marismortui (strain ATCC 43049

Query: 3 VRRFMEAG 10
VRR +EAG
Sbjct: 105 VRRLLEAG 112


>sp|PHAC_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula hispanica (strain ATCC 33960

Query: 3 VRRFMEAG 10
VRR +EAG
Sbjct: 105 VRRLLEAG 112


>sp|KAD_NATPD|ADENYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 RRFMEAG 10
R FMEAG
Sbjct: 52 REFMEAG 58


>sp|RFRNP_HYPBU|RNA-FREE ribonuclease P|Hyperthermus butylicus (strain DSM 5456

Query: 2 HVRRFMEAG 10
HVRR EAG
Sbjct: 125 HVRRAFEAG 133


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 VRRFMEAG 10
VRRF+E G
Sbjct: 221 VRRFVEEG 228


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VRRFMEAG 10
VRRF+E G
Sbjct: 221 VRRFVEEG 228


>sp|HDRB2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B2|Methanococcus

Query: 1 VHVRRFME 8
VHVR F E
Sbjct: 117 VHVRHFAE 124


>sp|RS3_METMJ|SMALL ribosomal subunit protein uS3|Methanoculleus marisnigri (strain

Query: 3 VRRFMEAG 10
+RR ME+G
Sbjct: 117 IRRIMESG 124


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VRRFMEAG 10
VRRF+E G
Sbjct: 221 VRRFVEEG 228


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VRRFMEAG 10
VRRF+E G
Sbjct: 221 VRRFVEEG 228


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 VRRFMEAG 10
VRRF+E G
Sbjct: 221 VRRFVEEG 228


>sp|XERA_THEON|TYROSINE recombinase XerA|Thermococcus onnurineus (strain NA1)

Query: 2 HVRRFMEAG 10
+VRR++E G
Sbjct: 31 YVRRYLEGG 39


>sp|RS3_STAMF|SMALL ribosomal subunit protein uS3|Staphylothermus marinus (strain ATCC

Query: 3 VRRFMEAG 10
+RR MEAG
Sbjct: 120 LRRVMEAG 127


>sp|TRMY_METKA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanopyrus kandleri

Query: 1 VHVRRFMEA 9
+H+RR +EA
Sbjct: 85 IHLRRALEA 93




46|SequenceR|235|226|LGLVPVHVRR

>sp|RL10_SULTO|LARGE ribosomal subunit protein uL10|Sulfurisphaera tokodaii (strain DSM

Query: 1 LGLVPVHVR 9
LG++PVH++
Sbjct: 180 LGIMPVHIK 188


>sp|Y802_METJA|UNCHARACTERIZED protein MJ0802|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGLVPVHVRR 10
LG++P H RR
Sbjct: 50 LGVLPKHTRR 59


>sp|AMZA_HALSA|ARCHAEMETZINCIN salinarum (strain ATCC 700922

Query: 1 LGLVPVHVRR 10
+G VP HV+R
Sbjct: 8 VGDVPAHVKR 17


>sp|AMZA_HALS3|ARCHAEMETZINCIN salinarum (strain ATCC 29341

Query: 1 LGLVPVHVRR 10
+G VP HV+R
Sbjct: 8 VGDVPAHVKR 17


>sp|Y738_ARCFU|UPF0058 protein AF_0738|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGLVPVHVRR 10
LG+ PVH+ +
Sbjct: 36 LGVQPVHIHK 45


>sp|RL10_SULAC|LARGE ribosomal subunit protein uL10|Sulfolobus acidocaldarius (strain

Query: 1 LGLVPVHVR 9
LG++PV+V+
Sbjct: 182 LGIMPVYVK 190


>sp|DAPF_METTP|DIAMINOPIMELATE epimerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GLVPVHVRR 10
G++P+ VRR
Sbjct: 105 GVIPIQVRR 113


>sp|PANB_HALSA|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 LGLVPVHVRR 10
LGL P HV +
Sbjct: 140 LGLTPQHVNQ 149


>sp|PANB_HALS3|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LGLVPVHVRR 10
LGL P HV +
Sbjct: 140 LGLTPQHVNQ 149


>sp|RL10_SACI7|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 LGLVPVHVR 9
LG++PV+V+
Sbjct: 183 LGIMPVYVK 191


>sp|RL10_SACI2|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 LGLVPVHVR 9
LG++PV+V+
Sbjct: 183 LGIMPVYVK 191


>sp|RL10_SACI1|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 LGLVPVHVR 9
LG++PV+V+
Sbjct: 183 LGIMPVYVK 191


>sp|RL10_SACI3|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 LGLVPVHVR 9
LG++PV+V+
Sbjct: 183 LGIMPVYVK 191


>sp|RL10_SACI6|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 LGLVPVHVR 9
LG++PV+V+
Sbjct: 183 LGIMPVYVK 191


>sp|RL10_SACI4|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 LGLVPVHVR 9
LG++PV+V+
Sbjct: 183 LGIMPVYVK 191


>sp|AMPK_PYRFU|LYSYL aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGLVPVHVRR 10
+G++P H+RR
Sbjct: 111 VGVLPPHLRR 120


>sp|RL10_SACS2|LARGE ribosomal subunit protein uL10|Saccharolobus solfataricus (strain

Query: 1 LGLVPVHVR 9
LG++PV+V+
Sbjct: 183 LGIMPVYVK 191


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 LGLVPVHVRR 10
LG+VP+ RR
Sbjct: 504 LGVVPIEERR 513


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 2 GLVPVHV 8
G VPVH+
Sbjct: 639 GFVPVHI 645


>sp|PDXT_METMJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanoculleus marisnigri

Query: 1 LGLVPVHVRR 10
L L+P+HV R
Sbjct: 100 LSLIPMHVAR 109


>sp|RPO6_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo6|Sulfurisphaera tokodaii (strain DSM

Query: 2 GLVPVHVRR 10
G++P+ VRR
Sbjct: 60 GVLPITVRR 68


>sp|RPO6_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo6|Archaeoglobus fulgidus (strain ATCC

Query: 2 GLVPVHVRR 10
G++P+ VRR
Sbjct: 53 GVIPITVRR 61


>sp|SUCD_METTH|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanothermobacter

Query: 1 LGLVPVHV 8
LG++P H+
Sbjct: 138 LGIMPTHI 145


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GLVPVH 7
G+VPVH
Sbjct: 329 GVVPVH 334




47|SequenceR|240|231|SMNQVLGLVP

>sp|DAPB_METS3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SMNQVLGL 8
SMN VLGL
Sbjct: 265 SMNDVLGL 272


>sp|RS19_METAR|SMALL ribosomal subunit protein uS19|Methanocella arvoryzae (strain DSM

Query: 2 MNQVLGLVP 10
MNQV L+P
Sbjct: 34 MNQVAALLP 42


>sp|SRP54_METVS|SIGNAL recognition particle 54 kDa|Methanococcus vannielii (strain ATCC

Query: 2 MNQVLGLVP 10
M Q++G++P
Sbjct: 344 MKQIMGMIP 352


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SMNQVLGLVP 10
++NQ+ GL+P
Sbjct: 328 TINQLAGLLP 337


>sp|SRP54_METS3|SIGNAL recognition particle 54 kDa|Methanobrevibacter smithii (strain ATCC

Query: 2 MNQVLGLVP 10
M QVL ++P
Sbjct: 342 MQQVLSMIP 350


>sp|PFDA_METBU|PREFOLDIN subunit alpha|Methanococcoides burtonii (strain DSM 6242

Query: 1 SMNQVLGLV 9
S+NQ LG+V
Sbjct: 25 SVNQQLGMV 33




48|SequenceR|245|236|PCQFVSMNQV

>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PCQFVSMN 8
P +FV MN
Sbjct: 323 PAEFVEMN 330




49|SequenceR|250|241|KHKCKPCQFV

>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KHKCKPC 7
K CKPC
Sbjct: 202 KDNCKPC 208


>sp|PYRK_THEAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma acidophilum

Query: 2 HKCKPCQFV 10
H KP QFV
Sbjct: 25 HDVKPGQFV 33


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KHKCKPC 7
K KCK C
Sbjct: 12 KQKCKTC 18


>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 1 KHKCKPC 7
KHK PC
Sbjct: 162 KHKYNPC 168


>sp|RL37_METS5|LARGE ribosomal subunit protein eL37|Metallosphaera sedula (strain ATCC

Query: 1 KHKCKPCQF 9
KHKC C F
Sbjct: 31 KHKCAACGF 39


>sp|Y587_METJA|UNCHARACTERIZED protein MJ0587|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KHKCKPCQFV 10
+H KP +FV
Sbjct: 110 EHPLKPIEFV 119


>sp|Y1679_METMP|UPF0179 protein MMP1679|Methanococcus maripaludis (strain DSM 14266

Query: 2 HKCKPCQF 9
+C+PC+F
Sbjct: 25 EECEPCRF 32


>sp|Y993_METM6|UPF0179 protein MmarC6_0993|Methanococcus maripaludis (strain C6 /

Query: 3 KCKPCQF 9
+C+PC+F
Sbjct: 26 ECEPCRF 32


>sp|Y952_METM7|UPF0179 protein MmarC7_0952|Methanococcus maripaludis (strain C7 /

Query: 3 KCKPCQF 9
+C+PC+F
Sbjct: 26 ECEPCRF 32


>sp|Y1728_METM5|UPF0179 protein MmarC5_1728|Methanococcus maripaludis (strain C5 /

Query: 3 KCKPCQF 9
+C+PC+F
Sbjct: 26 ECEPCRF 32


>sp|RNH2_METAR|RIBONUCLEASE HII|Methanocella arvoryzae (strain DSM 22066

Query: 1 KHKCKP 6
KHKC P
Sbjct: 193 KHKCLP 198




50|SequenceR|255|246|GFIHTKHKCK

>sp|ILVC_METB6|KETOL-ACID reductoisomerase (NADP(+))|Methanoregula boonei (strain DSM 21154

Query: 3 IHTKHKCK 10
IH H CK
Sbjct: 152 IHQDHTCK 159


>sp|TRXB_METJA|PUTATIVE thioredoxin reductase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GFIHTKHKCK 10
GFI T C+
Sbjct: 252 GFIKTDENCR 261


>sp|PURA_METS3|ADENYLOSUCCINATE synthetase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GFIHTKHK 8
GF+HT K
Sbjct: 60 GFVHTDAK 67


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 GFIHTKH 7
G++ TKH
Sbjct: 7 GYVETKH 13


>sp|AKSA_METTH|HOMOCITRATE synthase AksA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 IHTKHKCK 10
+H KHK K
Sbjct: 116 LHLKHKLK 123




51|SequenceR|260|251|RAGDAGFIHT

>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 2 AGDAGFIH 9
A DAGF+H
Sbjct: 212 AADAGFVH 219


>sp|SYS_METST|SERINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 AGDAGFIHT 10
AGDA +HT
Sbjct: 371 AGDAQILHT 379


>sp|Y1577_METJA|UNCHARACTERIZED protein MJ1577|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AGDAGF 7
AGDAGF
Sbjct: 323 AGDAGF 328


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 RAGDAGFIH 9
+AGD GF++
Sbjct: 543 QAGDTGFVN 551


>sp|PELO_METBU|PROTEIN pelota homolog|Methanococcoides burtonii (strain DSM 6242

Query: 4 DAGFIHT 10
DAGF HT
Sbjct: 93 DAGFYHT 99


>sp|ARLY_METST|ARGININOSUCCINATE lyase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 DAGFIHT 10
+AGF+HT
Sbjct: 97 EAGFMHT 103


>sp|ARLY_METTH|ARGININOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 DAGFIHT 10
+AGF+HT
Sbjct: 97 EAGFMHT 103


>sp|RL3_THESM|LARGE ribosomal subunit protein uL3|Thermococcus sibiricus (strain DSM

Query: 1 RAGDAGFIH 9
RAG GF H
Sbjct: 265 RAGQMGFHH 273


>sp|KAE1B_HALMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 RAGDAGFIH 9
R DAGF+H
Sbjct: 450 RIHDAGFVH 458


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 3 GDAGFIHT 10
GD+ F HT
Sbjct: 468 GDSTFFHT 475


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 3 GDAGFIHT 10
GD+ F HT
Sbjct: 468 GDSTFFHT 475


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GDAGFIHT 10
GD GFI T
Sbjct: 455 GDVGFIVT 462


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 4 DAGFIHT 10
DAG +HT
Sbjct: 155 DAGSVHT 161


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 2 AGDAGFI 8
AG+AGF+
Sbjct: 738 AGNAGFV 744


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GDAGFIH 9
G+AG IH
Sbjct: 327 GEAGLIH 333


>sp|IMDH_NITMS|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RAGDAGFIH 9
RAG G IH
Sbjct: 62 RAGGIGIIH 70




52|SequenceR|265|256|TQALKRAGDA

>sp|HUTI_THEVO|IMIDAZOLONEPROPIONASE volcanium (strain ATCC 51530

Query: 1 TQALKRAGDA 10
TQ++KR DA
Sbjct: 119 TQSMKRIADA 128


>sp|AROD_PYRAE|3-DEHYDROQUINATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QALKRAGD 9
Q L+RAGD
Sbjct: 275 QVLRRAGD 282


>sp|HPRT_METIM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocaldococcus infernus (strain DSM

Query: 2 QALKRAG 8
+ALKRAG
Sbjct: 134 EALKRAG 140


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 2 QALKRAGDA 10
+ LK+AGDA
Sbjct: 88 EILKKAGDA 96




53|SequenceR|270|261|VELGLTQALK

>sp|FRHD_METTH|COENZYME F420 hydrogenase subunit delta|Methanothermobacter

Query: 1 VELGLTQALK 10
VE+GLT +K
Sbjct: 131 VEMGLTPPVK 140




54|SequenceR|275|266|PIDGLVELGL

>sp|CRTD_HALJT|CAROTENOID 3,4-desaturase|Haloarcula japonica (strain ATCC 49778

Query: 2 IDGLVELG 9
+DGLVELG
Sbjct: 232 VDGLVELG 239


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PIDGLVELG 9
PID L+E+G
Sbjct: 132 PIDKLIEIG 140


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PIDGLVEL 8
P++GLVEL
Sbjct: 120 PLEGLVEL 127


>sp|ALAXM_METAC|ALANYL-TRNA editing protein AlaX-M|Methanosarcina acetivorans (strain ATCC

Query: 1 PIDGLVELGL 10
P+DG LGL
Sbjct: 76 PVDGNAALGL 85


>sp|Y772_METJA|UNCHARACTERIZED protein MJ0772|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IDGLVELGL 10
+D LVELG+
Sbjct: 288 LDELVELGI 296


>sp|PURO_META3|IMP cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IDGLVELG 9
IDG +ELG
Sbjct: 194 IDGDIELG 201


>sp|RPO7_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo7|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PIDGLVEL 8
P+DGLV +
Sbjct: 103 PVDGLVHI 110


>sp|GGR1_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PIDGLVE 7
PI+GL+E
Sbjct: 259 PINGLIE 265


>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PIDGLVELG 9
P++G++E G
Sbjct: 54 PVNGIIEKG 62


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PIDGLVEL 8
P+D L+EL
Sbjct: 450 PVDELIEL 457


>sp|RS5_IGNH4|SMALL ribosomal subunit protein uS5|Ignicoccus hospitalis (strain

Query: 3 DGLVELGL 10
DGLV LG+
Sbjct: 83 DGLVGLGM 90


>sp|THSB_ARCFU|THERMOSOME subunit beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIDGLVEL 8
PID LVEL
Sbjct: 459 PIDVLVEL 466


>sp|GVPF_HALMT|GAS vesicle protein F|Haloferax mediterranei (strain ATCC 33500

Query: 2 IDGLVELGL 10
I+G VELG+
Sbjct: 108 IEGTVELGV 116


>sp|THSA_ARCFU|THERMOSOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIDGLVEL 8
PID LVEL
Sbjct: 459 PIDILVEL 466


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 PIDGLVELGL 10
PI+G+ +GL
Sbjct: 114 PIEGIARVGL 123


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 DGLVELGL 10
DGL LGL
Sbjct: 144 DGLTSLGL 151


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 DGLVELGL 10
DGL LGL
Sbjct: 144 DGLTSLGL 151


>sp|TPIS_THEAC|TRIOSEPHOSPHATE isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PIDGLVELGL 10
P+D +++LG+
Sbjct: 73 PMDMMIDLGI 82


>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 2 IDGLVELG 9
IDGL++LG
Sbjct: 330 IDGLLKLG 337


>sp|PGK_AERPE|PHOSPHOGLYCERATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PIDGLVELG 9
PID +VE+G
Sbjct: 281 PIDFVVEVG 289


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 PIDGLVELGL 10
P++GL LG+
Sbjct: 92 PVEGLKVLGI 101


>sp|RPO7_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo7|Saccharolobus shibatae (strain ATCC

Query: 1 PIDGLVEL 8
P+DGLV +
Sbjct: 103 PMDGLVHI 110


>sp|RPO7_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo7|Saccharolobus solfataricus (strain ATCC

Query: 1 PIDGLVEL 8
P+DGLV +
Sbjct: 103 PMDGLVHI 110


>sp|AGOG_THEKO|N-GLYCOSYLASE/DNA lyase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IDGLVELGL 10
++GL ELG+
Sbjct: 22 VEGLKELGI 30




55|SequenceR|280|271|INLHLPIDGL

>sp|GCH1L_HALSA|GTP cyclohydrolase 1 type 2|Halobacterium salinarum (strain ATCC 700922

Query: 4 HLPIDG 9
HLP+DG
Sbjct: 97 HLPLDG 102


>sp|PGK_HALSA|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LHLPID 8
LHLP+D
Sbjct: 271 LHLPVD 276


>sp|PGK_HALS3|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 3 LHLPID 8
LHLP+D
Sbjct: 271 LHLPVD 276


>sp|HTPX1_METMA|PROTEASE HtpX homolog 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NLHLPIDGL 10
NLH +DGL
Sbjct: 69 NLHRIVDGL 77


>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NLHLPIDG 9
++H PIDG
Sbjct: 416 DIHSPIDG 423


>sp|RS19_METLZ|SMALL ribosomal subunit protein uS19|Methanocorpusculum labreanum (strain

Query: 1 INLHLPIDGL 10
IN+ +P++G+
Sbjct: 94 INVEIPVEGV 103


>sp|HTPX1_METAC|PROTEASE HtpX homolog 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NLHLPIDGL 10
NLH +DGL
Sbjct: 69 NLHRIVDGL 77


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 INLHLP 6
INLH+P
Sbjct: 208 INLHVP 213


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 NLHLPIDGL 10
+L LP+DG+
Sbjct: 62 SLKLPVDGV 70


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 HLPIDG 9
HLP DG
Sbjct: 695 HLPADG 700


>sp|KHSE_METJA|HOMOSERINE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LHLPID 8
LH+PID
Sbjct: 158 LHIPID 163


>sp|PCNA_HALLT|DNA polymerase sliding clamp|Halorubrum lacusprofundi (strain ATCC

Query: 3 LHLPIDGL 10
LH+ IDGL
Sbjct: 97 LHIEIDGL 104


>sp|Y1295_ARCFU|UNCHARACTERIZED protein AF_1295|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LHLPIDG 9
LHL +DG
Sbjct: 8 LHLSVDG 14


>sp|PCNA_HALMA|DNA polymerase sliding clamp|Haloarcula marismortui (strain ATCC 43049

Query: 3 LHLPIDGL 10
LH+ IDGL
Sbjct: 97 LHISIDGL 104


>sp|KHSE_METMP|HOMOSERINE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LHLPID 8
LH+P+D
Sbjct: 161 LHIPVD 166


>sp|PCNA_HALSA|DNA polymerase sliding clamp|Halobacterium salinarum (strain ATCC

Query: 2 NLHLPIDGL 10
LH+ IDGL
Sbjct: 96 KLHIQIDGL 104


>sp|PCNA_HALS3|DNA polymerase sliding clamp|Halobacterium salinarum (strain ATCC 29341

Query: 2 NLHLPIDGL 10
LH+ IDGL
Sbjct: 96 KLHIQIDGL 104


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 NLHLPIDG 9
N+H+ +DG
Sbjct: 749 NVHVAVDG 756


>sp|ENDA_HALSA|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 700922

Query: 5 LPIDGL 10
LP+DGL
Sbjct: 130 LPVDGL 135


>sp|ENDA_HALS3|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 29341

Query: 5 LPIDGL 10
LP+DGL
Sbjct: 130 LPVDGL 135


>sp|KHSE_METM5|HOMOSERINE kinase|Methanococcus maripaludis (strain C5 /

Query: 3 LHLPID 8
LH+P+D
Sbjct: 161 LHIPVD 166


>sp|KHSE_METM7|HOMOSERINE kinase|Methanococcus maripaludis (strain C7 /

Query: 3 LHLPID 8
LH+P+D
Sbjct: 161 LHIPVD 166


>sp|KHSE_METM6|HOMOSERINE kinase|Methanococcus maripaludis (strain C6 /

Query: 3 LHLPID 8
LH+P+D
Sbjct: 161 LHIPVD 166




56|SequenceR|285|276|DSAERINLHL

>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DSAERINLHL 10
D ERI +HL
Sbjct: 385 DVTERIGIHL 394


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DSAERINLHL 10
D AER+ HL
Sbjct: 385 DVAERVGAHL 394


>sp|HIS1_SACS2|ATP phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 DSAERINLHL 10
D A+RINL L
Sbjct: 197 DEADRINLLL 206


>sp|PELO_PYRFU|PROTEIN pelota homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AERINLH 9
AE+INLH
Sbjct: 67 AEKINLH 73


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 3 AERINLH 9
AE+INLH
Sbjct: 67 AEKINLH 73




57|SequenceR|290|281|IPQGTDSAER

>sp|TRPD_METTH|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 1 IPQGTDSAER 10
+P+GT++A+R
Sbjct: 320 LPEGTETAKR 329


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 IPQGTDSAER 10
IPQ TD A R
Sbjct: 41 IPQATDMAGR 50


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC

Query: 1 IPQGTDSAER 10
IPQ TD A R
Sbjct: 41 IPQATDMAGR 50


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IPQGTDSAE 9
+P+GT SAE
Sbjct: 945 LPEGTASAE 953


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PQGTDSAE 9
P GTDS E
Sbjct: 140 PNGTDSPE 147


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IPQGTDSAE 9
+P+GT SAE
Sbjct: 945 LPEGTASAE 953


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IPQGTDSAE 9
+P+GT SAE
Sbjct: 945 LPEGTASAE 953


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain

Query: 1 IPQGTDSAER 10
+PQ TD A R
Sbjct: 44 VPQATDMAGR 53


>sp|PELO_IGNH4|PROTEIN pelota homolog|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IPQGTDSAER 10
+P+GT++ ER
Sbjct: 320 VPKGTEAWER 329


>sp|RL32_THESM|LARGE ribosomal subunit protein eL32|Thermococcus sibiricus (strain DSM

Query: 2 PQGTDSAER 10
P+GTDS R
Sbjct: 41 PKGTDSKMR 49


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 1 IPQGTDS 7
IP+GTD+
Sbjct: 279 IPEGTDA 285


>sp|SYP_HALSA|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IPQGTDSAER 10
+P G DSA R
Sbjct: 455 VPLGEDSAAR 464


>sp|SYP_HALS3|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 IPQGTDSAER 10
+P G DSA R
Sbjct: 455 VPLGEDSAAR 464


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 IPQGTDSAER 10
IP TD A+R
Sbjct: 43 IPSATDLADR 52


>sp|SYS_HALWD|SERINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IPQGTDSAE 9
+P GTD +E
Sbjct: 114 VPVGTDESE 122


>sp|DNAG_METAC|DNA primase DnaG|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IPQGTDSAER 10
+P+G SAE+
Sbjct: 386 VPRGKPSAEK 395




58|SequenceR|295|286|PQSFVIPQGT

>sp|AATC_PYRHO|A-TYPE ATP synthase subunit C|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PQSFVIPQG 9
PQ F+IP G
Sbjct: 143 PQDFIIPAG 151


>sp|AATC_PYRAB|A-TYPE ATP synthase subunit C|Pyrococcus abyssi (strain GE5 /

Query: 1 PQSFVIPQG 9
PQ F++P G
Sbjct: 143 PQDFIMPAG 151


>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PQSFVIPQG 9
PQ+ V+P G
Sbjct: 49 PQTIVVPDG 57


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 QSFVIPQGT 10
Q++VIP GT
Sbjct: 561 QTYVIPVGT 569


>sp|Y426_ARCFU|UNCHARACTERIZED protein AF_0426|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SFVIPQG 9
S+V+PQG
Sbjct: 28 SYVLPQG 34


>sp|SYH_PYRAB|HISTIDINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PQSFVIPQG 9
P FVIP G
Sbjct: 338 PDVFVIPVG 346


>sp|THYX_THEKO|FLAVIN-DEPENDENT thymidylate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QSFVIPQG 9
++FVIP G
Sbjct: 106 ETFVIPSG 113


>sp|AATC_PYRFU|A-TYPE ATP synthase subunit C|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QSFVIPQG 9
Q FVIP G
Sbjct: 144 QDFVIPVG 151


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 PQSFVIPQG 9
PQ ++P+G
Sbjct: 788 PQDILVPEG 796


>sp|Y672_METJA|UNCHARACTERIZED transporter MJ0672|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SFVIPQGT 10
SF++P GT
Sbjct: 386 SFILPVGT 393


>sp|RL1_NATPD|LARGE ribosomal subunit protein uL1|Natronomonas pharaonis (strain ATCC

Query: 2 QSFVIPQGT 10
+S V+P GT
Sbjct: 45 ESIVLPSGT 53


>sp|RL1_HALVD|LARGE ribosomal subunit protein uL1|Haloferax volcanii (strain ATCC

Query: 2 QSFVIPQGT 10
+S V+P GT
Sbjct: 45 ESIVLPSGT 53




59|SequenceR|300|291|AEDSEPQSFV

>sp|Y910_METJA|UNCHARACTERIZED protein MJ0910|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DSEPQSFV 10
D+EPQSF+
Sbjct: 129 DTEPQSFI 136


>sp|ARGDC_SACS2|ARGININE decarboxylase proenzyme|Saccharolobus solfataricus (strain ATCC

Query: 1 AEDSEPQS 8
EDS+PQS
Sbjct: 103 GEDSDPQS 110


>sp|ARGDC_SACI7|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 AEDSEPQS 8
EDS+PQS
Sbjct: 103 GEDSDPQS 110


>sp|ARGDC_SACI6|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 1 AEDSEPQS 8
EDS+PQS
Sbjct: 103 GEDSDPQS 110


>sp|ARGDC_SACI4|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 1 AEDSEPQS 8
EDS+PQS
Sbjct: 103 GEDSDPQS 110


>sp|ARGDC_SACI3|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain M.16.27)

Query: 1 AEDSEPQS 8
EDS+PQS
Sbjct: 103 GEDSDPQS 110


>sp|ARGDC_SACI2|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 AEDSEPQS 8
EDS+PQS
Sbjct: 103 GEDSDPQS 110


>sp|ARGDC_SACI1|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 AEDSEPQS 8
EDS+PQS
Sbjct: 103 GEDSDPQS 110


>sp|ARGDC_METS5|ARGININE decarboxylase proenzyme|Metallosphaera sedula (strain ATCC 51363

Query: 1 AEDSEPQS 8
EDS+PQ+
Sbjct: 97 GEDSDPQA 104




60|SequenceR|305|296|RLYAKAEDSE

>sp|RL11_THEGJ|LARGE ribosomal subunit protein uL11|Thermococcus gammatolerans (strain

Query: 2 LYAKAEDSE 10
L+AKAE++E
Sbjct: 157 LFAKAEEAE 165


>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 LYAKAEDS 9
+YAK EDS
Sbjct: 311 VYAKPEDS 318


>sp|AATE_HALWD|A-TYPE ATP synthase subunit E|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RLYAKAEDSE 10
+LYA+A+D++
Sbjct: 123 KLYARADDAD 132


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LYAKAEDSE 10
+Y+KAE++E
Sbjct: 426 IYSKAEETE 434




61|SequenceR|310|301|VEVAIRLYAK

>sp|Y27A_AERPE|UPF0175 protein APE_0276a|Aeropyrum pernix (strain ATCC 700893

Query: 1 VEVAIRLYAK 10
+E+A+RLY K
Sbjct: 30 IELALRLYEK 39


>sp|PDXS_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Hyperthermus butylicus (strain

Query: 4 AIRLYAK 10
AIRLYAK
Sbjct: 220 AIRLYAK 226


>sp|HISX_NATPD|HISTIDINOL dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EVAIRLYAK 10
+VA+R YAK
Sbjct: 43 DVALRSYAK 51


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 1 VEVAIRLYAK 10
VEVAIR++ +
Sbjct: 361 VEVAIRVHER 370




62|SequenceR|319|306|ESPSPLRRVVEVAI

>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SPSPLRRVVEVA 13
+P LRR+VE A
Sbjct: 586 APGDLRRIVETA 597


>sp|RRP41_PYRIL|EXOSOME complex component Rrp41|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ESPSPLRRVVEVA 13
+SP+P RR +E++
Sbjct: 88 KSPTPTRREIEIS 100


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 SPSPLRRVVEV 12
+P P++RVVE+
Sbjct: 103 APDPVKRVVEL 113


>sp|RRP41_PYRCJ|EXOSOME complex component Rrp41|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ESPSPLRRVVEVA 13
+SP+P RR +E++
Sbjct: 88 KSPTPSRREIEIS 100


>sp|RRP41_PYRAE|EXOSOME complex component Rrp41|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ESPSPLRRVVEVA 13
+SP+P RR +E++
Sbjct: 88 KSPTPSRREIEIS 100


>sp|RRP41_PYRAR|EXOSOME complex component Rrp41|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ESPSPLRRVVEVA 13
+SP+P RR +E++
Sbjct: 88 KSPTPSRREIEIS 100


>sp|RRP41_PYRNV|EXOSOME complex component Rrp41|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ESPSPLRRVVEVA 13
+SP+P RR +E++
Sbjct: 88 KSPTPSRREIEIS 100


>sp|MTHT_METTF|TYPE II methyltransferase M.MthTI|Methanothermobacter thermautotrophicus

Query: 1 ESPSPLRRV 9
ESP P RR+
Sbjct: 268 ESPKPYRRL 276


>sp|RRP41_NITMS|EXOSOME complex component Rrp41|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ESPSPLRRVVEVA 13
++P+P RR +E++
Sbjct: 90 KNPAPSRREIEIS 102


>sp|ADHS_METJA|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SPSPLRRVV 10
SP+PL++V+
Sbjct: 93 SPNPLKKVI 101


>sp|KDGK_SULTO|2-DEHYDRO-3-DEOXYGLUCONOKINASE tokodaii (strain DSM 16993

Query: 2 SPSPLRRV 9
SP PLR V
Sbjct: 18 SPGPLRHV 25


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ESPSPLRRVVE 11
E+PS +R++VE
Sbjct: 265 ENPSYVRKIVE 275


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 SPSPLRRVVEV 12
SP P RRV EV
Sbjct: 559 SPLPKRRVSEV 569


>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PSPLRRVVEVA 13
P P+R + E+A
Sbjct: 176 PHPIREIAEIA 186


>sp|FLPA_HALWD|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloquadratum walsbyi (strain DSM

Query: 2 SPSPLRRVVEVA 13
+P P+R ++EVA
Sbjct: 94 APRPVRDLLEVA 105


>sp|RRP41_THEGJ|EXOSOME complex component Rrp41|Thermococcus gammatolerans (strain DSM

Query: 1 ESPSPLRRVVEVA 13
+ P P RR VE++
Sbjct: 90 KKPGPDRRSVEIS 102


>sp|RL11_AERPE|LARGE ribosomal subunit protein uL11|Aeropyrum pernix (strain ATCC

Query: 5 PLRRVVEVAI 14
P ++VE+AI
Sbjct: 37 PFEKIVEIAI 46


>sp|CAS1_NANEQ|CRISPR-ASSOCIATED endonuclease Cas1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ESPSPLRRVVEVAI 14
+SP PL + E+ I
Sbjct: 28 KSPIPLESIKEIFI 41


>sp|RRP41_THEON|EXOSOME complex component Rrp41|Thermococcus onnurineus (strain NA1)

Query: 1 ESPSPLRRVVEVA 13
+ P P RR VE++
Sbjct: 90 KKPGPDRRSVEIS 102


>sp|ADEC_ARCFU|ADENINE deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 LRRVVEVA 13
LRR++EVA
Sbjct: 11 LRRIIEVA 18


>sp|KCY_NATPD|CYTIDYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SPSPLRRVVEVAI 14
SP +R VVE A+
Sbjct: 159 SPDGVRAVVESAV 171


>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PSPLRRVVEV 12
P P RR+VE+
Sbjct: 261 PQPDRRIVEL 270


>sp|RRP41_CENSY|EXOSOME complex component Rrp41|Cenarchaeum symbiosum (strain A)

Query: 1 ESPSPLRRVVEVA 13
+ P+P RR +E++
Sbjct: 90 KKPAPSRREIEIS 102


>sp|AROA_METKA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 ESPSPLRRVVEV 12
+S P RR+VE+
Sbjct: 265 DSSHPDRRIVEI 276


>sp|GLYA_PYRCJ|SERINE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 PSPLRRVVEVA 13
P P++ V E+A
Sbjct: 176 PHPIKEVAEIA 186


>sp|UPPS_METTH|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanothermobacter

Query: 3 PSPLRRVVEVA 13
P +RR +E+A
Sbjct: 127 PEDVRRAIEIA 137


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 PSPLRRVVEV 12
P P+ RVVE+
Sbjct: 673 PDPVLRVVEI 682


>sp|RRP41_PYRFU|EXOSOME complex component Rrp41|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ESPSPLRRVVEVA 13
+ P P RR +E++
Sbjct: 90 KKPGPDRRSIEIS 102


>sp|RRP41_METMA|EXOSOME complex component Rrp41|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PSPLRRVVEVA 13
P P RR +E++
Sbjct: 92 PGPSRRSIEIS 102


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 SPLRRVVEV 12
SP+ R+VE+
Sbjct: 688 SPILRIVEI 696


>sp|RRP41_PYRHO|EXOSOME complex component Rrp41|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ESPSPLRRVVEVA 13
+ P P RR +E++
Sbjct: 90 KKPGPDRRSIEIS 102


>sp|RRP41_THEKO|EXOSOME complex component Rrp41|Thermococcus kodakarensis (strain ATCC

Query: 1 ESPSPLRRVVEVA 13
+ P P RR VE++
Sbjct: 90 KKPGPDRRSVEIS 102


>sp|RRP41_METTH|EXOSOME complex component Rrp41|Methanothermobacter thermautotrophicus

Query: 3 PSPLRRVVEVA 13
P P RR VE++
Sbjct: 92 PGPDRRSVEIS 102


>sp|RPO1C_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Aeropyrum pernix (strain ATCC 700893

Query: 1 ESPSPLRR 8
E PSPL R
Sbjct: 349 EKPSPLAR 356


>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 2 SPSPLRRVVEVAI 14
SP ++R E+AI
Sbjct: 603 SPEEVKRAKEIAI 615


>sp|WTPA_PYRHO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PSPLRRVVEV 12
P +RR+VEV
Sbjct: 329 PPEIRRLVEV 338


>sp|PYRDB_METKA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanopyrus kandleri (strain

Query: 2 SPSPLRRVVEV 12
+P P R VVE+
Sbjct: 75 NPGPDRMVVEI 85


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PSPLRRVVEVA 13
P P++ + EVA
Sbjct: 176 PHPVKEIAEVA 186


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 ESPSPLRRVV 10
E P PL+ V+
Sbjct: 445 EPPEPLKEVI 454


>sp|RL10E_METPE|LARGE ribosomal subunit protein uL16|Methanosphaerula palustris (strain

Query: 3 PSPLRRVVE 11
PSP R V+E
Sbjct: 157 PSPARLVIE 165




THE END