NUBPL_HUMAN Blast Output
Archaea
1|Sequence|1|10|MGIWQRLLLF

>sp|Y2050_ARCFU|UPF0047 protein AF_2050|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MGIWQRLLLF 10
+G WQR+L
Sbjct: 102 LGTWQRILFL 111


>sp|RS8E_META3|SMALL ribosomal subunit protein eS8|Methanococcus aeolicus (strain

Query: 1 MGIWQ 5
MGIWQ
Sbjct: 1 MGIWQ 5




2|Sequence|6|15|RLLLFGGVSL

>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 RLLLFGGVSL 10
RLL FG V+L
Sbjct: 420 RLLKFGAVAL 429


>sp|GATD_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma volcanium (strain ATCC

Query: 3 LLFGGVSL 10
LLFGG L
Sbjct: 98 LLFGGTEL 105


>sp|Y1546_PYRCJ|UPF0282 protein Pcal_1546|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RLLLFGGVSL 10
R+LL GVSL
Sbjct: 26 RILLDAGVSL 35


>sp|RS6E_ARCFU|SMALL ribosomal subunit protein eS6|Archaeoglobus fulgidus (strain ATCC

Query: 1 RLLLFGGVSL 10
RLLL GGV
Sbjct: 74 RLLLSGGVGF 83


>sp|CAS2_HYPBU|CRISPR-ASSOCIATED endoribonuclease Cas2|Hyperthermus butylicus (strain DSM 5456

Query: 1 RLLLFGGV 8
R+L++GG+
Sbjct: 75 RMLVYGGI 82


>sp|CS1F2_THETK|CRISPR-ASSOCIATED endonuclease Cas1/endonuclease Cas2 fusion|Thermoproteus tenax

Query: 2 LLLFGGVSL 10
LLL GG+S+
Sbjct: 5 LLLTGGISI 13




3|Sequence|11|20|GGVSLRAGGG

>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 GVSLRAGGG 10
G+S+RA GG
Sbjct: 322 GISMRAFGG 330


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 VSLRAGG 9
VSLRAGG
Sbjct: 278 VSLRAGG 284


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 GGVSLRAGGG 10
GG +RA GG
Sbjct: 234 GGAEIRACGG 243


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GVSLRAGG 9
GVS+ AGG
Sbjct: 680 GVSIYAGG 687


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GVSLRAGG 9
GVS+ AGG
Sbjct: 683 GVSIYAGG 690


>sp|SFSA_PYRIL|SUGAR fermentation stimulation protein homolog|Pyrobaculum islandicum

Query: 2 GVSLRAGG 9
GV+L AGG
Sbjct: 132 GVTLEAGG 139


>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GVSLRAGGG 10
G +LRA GG
Sbjct: 185 GTTLRANGG 193


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 GGVSLRAGG 9
GG LR GG
Sbjct: 311 GGYELRVGG 319




4|Sequence|16|25|RAGGGATAPL

>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 AGGGATAPL 10
AGGG APL
Sbjct: 329 AGGGWAAPL 337


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AGGGATAPL 10
AGGG APL
Sbjct: 329 AGGGWAAPL 337


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 AGGGATAPL 10
AGGG APL
Sbjct: 329 AGGGWAAPL 337


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GGATAPL 10
GGAT PL
Sbjct: 1116 GGATLPL 1122


>sp|RL10_METM6|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C6

Query: 4 GGATAP 9
GGATAP
Sbjct: 119 GGATAP 124


>sp|THS_METJA|THERMOSOME subunit|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AGGGAT 7
AGGGAT
Sbjct: 406 AGGGAT 411


>sp|RL10_METM7|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C7

Query: 4 GGATAP 9
GGATAP
Sbjct: 119 GGATAP 124


>sp|DHQS_METMJ|3-DEHYDROQUINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 AGGGATAPL 10
AG GA+ PL
Sbjct: 143 AGAGASVPL 151


>sp|GGGPS_METAC|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RAGGGATAPL 10
AG GA AP+
Sbjct: 173 EAGSGADAPI 182




5|Sequence|21|30|ATAPLGGSRA

>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 TAPLGGSR 9
T P+GG+R
Sbjct: 406 TRPMGGAR 413


>sp|COFH_META3|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus aeolicus (strain ATCC

Query: 1 ATAPLGG 7
AT PLGG
Sbjct: 128 ATKPLGG 134


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TAPLGGS 8
TAP+GG+
Sbjct: 104 TAPMGGA 110


>sp|Y1761_METMA|MEMO1 family protein MM_1761|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ATAPLGGSRA 10
A+ LGGSRA
Sbjct: 231 ASKKLGGSRA 240


>sp|RFCS_METBF|REPLICATION factor C small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 TAPLGGS 8
TAP+GG+
Sbjct: 100 TAPMGGA 106


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TAPLGGS 8
TAP+GG+
Sbjct: 95 TAPIGGA 101


>sp|Y601_METAC|MEMO1 family protein MA_0601|Methanosarcina acetivorans (strain ATCC

Query: 1 ATAPLGGSRA 10
A+ LGGSRA
Sbjct: 231 ASQKLGGSRA 240


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 TAPLGGS 8
TAP+GG+
Sbjct: 104 TAPIGGA 110


>sp|HTR4_HALSA|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 700922

Query: 1 ATAPLGGSRA 10
AT+P+ G+RA
Sbjct: 238 ATSPIVGARA 247


>sp|HTR4_HALS3|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 29341

Query: 1 ATAPLGGSRA 10
AT+P+ G+RA
Sbjct: 238 ATSPIVGARA 247


>sp|COMC_METFV|L-SULFOLACTATE dehydrogenase|Methanothermus fervidus (strain ATCC 43054

Query: 1 ATAPLGG 7
A APLGG
Sbjct: 143 AVAPLGG 149


>sp|NASC_HALMT|PROBABLE molybdenum cofactor guanylyltransferase|Haloferax mediterranei

Query: 1 ATAPLGG 7
ATAP+GG
Sbjct: 32 ATAPVGG 38


>sp|G1PDH_NITMS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ATAPLG 6
ATAPLG
Sbjct: 149 ATAPLG 154




6|Sequence|26|35|GGSRAMVCGR

>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 GSRAMVCGR 10
GSR VCGR
Sbjct: 460 GSRCPVCGR 468


>sp|ECFA2_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 2 GSRAMVCGR 10
GSRA +C R
Sbjct: 320 GSRAKICAR 328


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GSRAMVCGR 10
G R VCGR
Sbjct: 458 GERCAVCGR 466


>sp|ENO_METTH|ENOLASE thermautotrophicus (strain ATCC 29096

Query: 2 GSRAMVCG 9
G R M+CG
Sbjct: 300 GDRCMICG 307


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GSRAMVCGR 10
GS+ VCGR
Sbjct: 460 GSKCPVCGR 468


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 2 GSRAMVCG 9
G R M+CG
Sbjct: 293 GDRTMICG 300


>sp|HPRL2_HALWD|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GGSRAMVCG 9
GG+ A +CG
Sbjct: 126 GGTLAAICG 134


>sp|HPRL2_HALWC|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16854

Query: 1 GGSRAMVCG 9
GG+ A +CG
Sbjct: 126 GGTLAAICG 134


>sp|HPRL2_HALVD|HGPRTASE-LIKE protein 2|Haloferax volcanii (strain ATCC 29605

Query: 1 GGSRAMVCG 9
GG+ A +CG
Sbjct: 126 GGTLAAICG 134


>sp|Y224_METKA|UPF0284 protein MK0224|Methanopyrus kandleri (strain AV19 /

Query: 1 GGSRAMVC 8
GGS MVC
Sbjct: 39 GGSTVMVC 46


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GGSRAMVCG 9
G +AM CG
Sbjct: 864 AGEKAMKCG 872


>sp|FOLD_METB6|BIFUNCTIONAL protein FolD|Methanoregula boonei (strain DSM 21154

Query: 1 GGSRAMVCGR 10
G+RA+V GR
Sbjct: 153 AGARAVVAGR 162


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 2 GSRAMVCG 9
G R ++CG
Sbjct: 288 GDRCLICG 295


>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GSRAMVCGR 10
G R +CGR
Sbjct: 465 GKRCPLCGR 473


>sp|ENO3_METHJ|ENOLASE 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GGSRAMVCG 9
G+R ++CG
Sbjct: 291 AGNRCLICG 299


>sp|COFC_HALMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GGSRAMVC 8
GG+ A VC
Sbjct: 120 GGTNAFVC 127


>sp|TRM56_HYPBU|TRNA (cytidine(56)-2'-O)-methyltransferase|Hyperthermus butylicus

Query: 1 GGSRAMVCG 9
GGS + CG
Sbjct: 66 GGSMELACG 74


>sp|ENO_NATPD|ENOLASE pharaonis (strain ATCC 35678

Query: 2 GSRAMVCG 9
G R ++CG
Sbjct: 292 GDRTLICG 299




7|Sequence|31|40|MVCGRQLSGA

>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MVCGRQL 7
M+CGR+L
Sbjct: 603 MICGREL 609


>sp|RAD50_SULTO|DNA double-strand break repair Rad50|Sulfurisphaera tokodaii (strain

Query: 2 VCGRQLS 8
VCGR+LS
Sbjct: 442 VCGRELS 448


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 MVCGRQLSGA 10
+VCGR+ +G+
Sbjct: 462 LVCGRESTGS 471


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 2 VCGRQLS 8
VCGR+L+
Sbjct: 442 VCGRELT 448


>sp|RAD50_PYRHO|DNA double-strand break repair Rad50|Pyrococcus horikoshii (strain ATCC

Query: 2 VCGRQLS 8
VCGR+L+
Sbjct: 443 VCGRELT 449


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 2 VCGRQLS 8
VCGR+L+
Sbjct: 446 VCGRELT 452


>sp|RAD50_PYRAB|DNA double-strand break repair Rad50|Pyrococcus abyssi (strain GE5 /

Query: 2 VCGRQLS 8
VCGR+L+
Sbjct: 444 VCGRELT 450


>sp|IF6_METST|TRANSLATION initiation factor 6|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VCGRQLSGA 10
+CG L+GA
Sbjct: 51 ICGSNLAGA 59


>sp|HYPA_ARCFU|HYDROGENASE maturation factor HypA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MVCGRQLS 8
++CGR+LS
Sbjct: 74 LLCGRELS 81


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 GRQLSGA 10
GR+LSGA
Sbjct: 115 GRKLSGA 121


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 2 VCGRQL 7
VCGR+L
Sbjct: 439 VCGREL 444


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 VCGRQL 7
VCGR+L
Sbjct: 391 VCGREL 396


>sp|RL34_HYPBU|LARGE ribosomal subunit protein eL34|Hyperthermus butylicus (strain DSM

Query: 2 VCGRQLSG 9
+CGR L+G
Sbjct: 39 ICGRPLNG 46


>sp|RL34_METKA|LARGE ribosomal subunit protein eL34|Methanopyrus kandleri (strain AV19

Query: 3 CGRQLSG 9
CGR+L+G
Sbjct: 40 CGRRLNG 46


>sp|RL34_PYRAB|LARGE ribosomal subunit protein eL34|Pyrococcus abyssi (strain GE5 /

Query: 2 VCGRQLSG 9
+CGR L+G
Sbjct: 38 ICGRPLNG 45


>sp|RL34_PYRHO|LARGE ribosomal subunit protein eL34|Pyrococcus horikoshii (strain ATCC

Query: 2 VCGRQLSG 9
+CGR L+G
Sbjct: 38 ICGRPLNG 45


>sp|RL34_THEGJ|LARGE ribosomal subunit protein eL34|Thermococcus gammatolerans (strain

Query: 2 VCGRQLSG 9
+CGR L+G
Sbjct: 38 MCGRPLNG 45




8|Sequence|36|45|QLSGAGSETL

***** No hits found ******


9|Sequence|41|50|GSETLKQRRT

>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 GSETLKQR 8
G ETLK+R
Sbjct: 109 GDETLKRR 116


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 3 ETLKQRR 9
ETL+QRR
Sbjct: 469 ETLRQRR 475


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 3 ETLKQRR 9
ETL+QRR
Sbjct: 469 ETLRQRR 475


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 3 ETLKQRR 9
ETL+QRR
Sbjct: 469 ETLRQRR 475




10|Sequence|46|55|KQRRTQIMSR

>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 KQRRTQIM 8
K+RRTQ+M
Sbjct: 575 KERRTQLM 582




11|Sequence|51|60|QIMSRGLPKQ

>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 SRGLPKQ 10
SRGLPK+
Sbjct: 75 SRGLPKE 81


>sp|KTHY_METM6|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain C6 /

Query: 3 MSRGLPK 9
MS+G+PK
Sbjct: 95 MSQGIPK 101


>sp|KTHY_METM7|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain C7 /

Query: 3 MSRGLPK 9
MS+G+PK
Sbjct: 95 MSQGIPK 101


>sp|RPO1C_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrobaculum aerophilum (strain ATCC

Query: 3 MSRGLPK 9
M+RGLP+
Sbjct: 87 MARGLPR 93


>sp|RS5_METST|SMALL ribosomal subunit protein uS5|Methanosphaera stadtmanae (strain

Query: 1 QIMSRGLP 8
QI+ +GLP
Sbjct: 42 QILDKGLP 49




12|Sequence|56|65|GLPKQKPIEG

>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GLPKQKPIEG 10
GLP+ KP+EG
Sbjct: 353 GLPELKPVEG 362


>sp|TRUD_HALMA|PROBABLE tRNA pseudouridine synthase D|Haloarcula marismortui (strain ATCC

Query: 1 GLPKQKPIEG 10
GLP +P+EG
Sbjct: 317 GLPFDRPVEG 326


>sp|CIMA_METPE|PUTATIVE (R)-citramalate synthase CimA|Methanosphaerula palustris (strain

Query: 2 LPKQKPIEG 10
LP QKPI G
Sbjct: 272 LPAQKPIVG 280


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLPKQKPIEG 10
G+P+ KP+EG
Sbjct: 726 GMPELKPVEG 735


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 GLPKQKPIEG 10
G+P+ KP+EG
Sbjct: 353 GMPELKPVEG 362


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 1 GLPKQKPIEG 10
GLP +P+EG
Sbjct: 287 GLPVHRPVEG 296


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LPKQKPIEG 10
+PK KPI G
Sbjct: 299 MPKNKPIVG 307


>sp|MFNA_PYRHO|L-ASPARTATE/L-GLUTAMATE decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GLPKQKPIE 9
GLPK+K IE
Sbjct: 7 GLPKEKVIE 15


>sp|EHAA_METJA|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex membrane|Methanocaldococcus

Query: 2 LPKQKPI 8
+PK+KPI
Sbjct: 37 IPKEKPI 43


>sp|RL19E_PYRHO|LARGE ribosomal subunit protein eL19|Pyrococcus horikoshii (strain ATCC

Query: 1 GLPKQKPIEG 10
G+ ++KPIEG
Sbjct: 48 GVIRKKPIEG 57


>sp|ISCU2_ARCFU|IRON-SULFUR cluster assembly scaffold protein|Archaeoglobus fulgidus (strain

Query: 1 GLPKQK 6
GLPKQK
Sbjct: 94 GLPKQK 99


>sp|ISCU1_ARCFU|IRON-SULFUR cluster assembly scaffold protein|Archaeoglobus fulgidus (strain

Query: 1 GLPKQK 6
GLPKQK
Sbjct: 94 GLPKQK 99


>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLPKQKPIEG 10
G+PK+ +EG
Sbjct: 67 GVPKEIDVEG 76


>sp|ARGB_METAR|ACETYLGLUTAMATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LPKQKPIEG 10
LP++K +EG
Sbjct: 19 LPRRKEVEG 27


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GLPKQKP 7
GLP+ KP
Sbjct: 215 GLPENKP 221


>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLPKQKPIEG 10
GL KQ+ +EG
Sbjct: 228 GLAKQEFVEG 237


>sp|PSTK_METMP|L-SERYL-TRNA(SEC) kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LPKQKPIE 9
+PK +P+E
Sbjct: 180 IPKSEPVE 187


>sp|RL19E_THEKO|LARGE ribosomal subunit protein eL19|Thermococcus kodakarensis (strain

Query: 1 GLPKQKPIEG 10
G+ K+KPI+G
Sbjct: 48 GVIKKKPIKG 57


>sp|APGM_AERPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLPKQKP 7
GLP++KP
Sbjct: 244 GLPEEKP 250


>sp|RL19E_PYRFU|LARGE ribosomal subunit protein eL19|Pyrococcus furiosus (strain ATCC

Query: 1 GLPKQKPIEG 10
G+ K+KPI+G
Sbjct: 48 GVIKKKPIKG 57


>sp|HISX_SULTO|HISTIDINOL dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LPKQKP 7
LPKQ+P
Sbjct: 6 LPKQRP 11




13|Sequence|61|70|KPIEGVKQVI

>sp|RLME_METHJ|RIBOSOMAL RNA large subunit methyltransferase|Methanospirillum hungatei

Query: 2 PIEGVKQVI 10
PIEGV+ +I
Sbjct: 75 PIEGVRTII 83


>sp|METK_METTM|S-ADENOSYLMETHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 KPIEGVKQV 9
+ IEGVKQV
Sbjct: 330 ESIEGVKQV 338


>sp|RLME_NATPD|RIBOSOMAL RNA large subunit methyltransferase|Natronomonas pharaonis

Query: 2 PIEGVKQV 9
PIEGV+ V
Sbjct: 74 PIEGVETV 81


>sp|MCRZ_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 KPIEGVKQ 8
+PIEG KQ
Sbjct: 74 EPIEGAKQ 81


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 2 PIEGVKQV 9
P+EG+K V
Sbjct: 114 PLEGIKDV 121


>sp|NAC_PYRHO|NASCENT polypeptide-associated complex protein|Pyrococcus horikoshii

Query: 1 KPIEGVKQVI 10
+ +EGVK+VI
Sbjct: 22 RQLEGVKEVI 31


>sp|METK_METTH|S-ADENOSYLMETHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KPIEGVKQV 9
+ +EGVKQV
Sbjct: 330 ESVEGVKQV 338


>sp|RL34_SULTO|LARGE ribosomal subunit protein eL34|Sulfurisphaera tokodaii (strain

Query: 1 KPIEGVK 7
KP++GVK
Sbjct: 42 KPLQGVK 48


>sp|RL14E_PYRAE|LARGE ribosomal subunit protein eL14|Pyrobaculum aerophilum (strain

Query: 1 KPIEGVKQ 8
KPI GVK+
Sbjct: 40 KPITGVKR 47


>sp|NAC_PYRAB|NASCENT polypeptide-associated complex protein|Pyrococcus abyssi (strain

Query: 1 KPIEGVKQVI 10
K ++GVK+VI
Sbjct: 19 KQLDGVKEVI 28




14|Sequence|66|75|VKQVIVVASG

>sp|GLCAE_SULAC|D-GLUCOSAMINE-6-PHOSPHATE 4-epimerase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VKQVIVVASG 10
VK++IV+ SG
Sbjct: 93 VKEIIVITSG 102


>sp|MOBA_PYRAB|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus abyssi (strain

Query: 1 VKQVIVVAS 9
+K+VI+VAS
Sbjct: 42 IKKVIIVAS 50


>sp|PROB_METBF|GLUTAMATE 5-kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KQVIVVASG 10
K+VIVV+SG
Sbjct: 57 KEVIVVSSG 65


>sp|Y1798_ARCFU|PUTATIVE phosphate permease AF_1798|Archaeoglobus fulgidus (strain ATCC

Query: 1 VKQVIVVAS 9
+KQ+I++AS
Sbjct: 39 LKQIIIIAS 47


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 KQVIVVASG 10
KQ+I+V+SG
Sbjct: 50 KQIILVSSG 58


>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KQVIVVASG 10
K+VI+V+SG
Sbjct: 57 KEVIIVSSG 65




15|Sequence|71|80|VVASGKGGVG

>sp|Y169_METJA|UNCHARACTERIZED ATP-binding protein MJ0169|Methanocaldococcus jannaschii (strain

Query: 2 VASGKGGVG 10
+ASGKGGVG
Sbjct: 8 IASGKGGVG 16


>sp|Y685_METJA|UNCHARACTERIZED ATP-binding protein MJ0685|Methanocaldococcus jannaschii (strain

Query: 1 VVASGKGGVG 10
+ SGKGGVG
Sbjct: 3 IAVSGKGGVG 12


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VASGKGGVG 10
+ SGKGGVG
Sbjct: 12 IISGKGGVG 20


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain

Query: 1 VVASGKGGVG 10
V SGKGGVG
Sbjct: 22 VFFSGKGGVG 31


Query: 4 SGKGGVG 10
+GKGGVG
Sbjct: 349 TGKGGVG 355


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain

Query: 1 VVASGKGGVG 10
V+ SGKGGVG
Sbjct: 43 VILSGKGGVG 52


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM

Query: 2 VASGKGGVG 10
V SGKGGVG
Sbjct: 45 VMSGKGGVG 53


>sp|Y547_METJA|UNCHARACTERIZED ATP-binding protein MJ0547|Methanocaldococcus jannaschii (strain

Query: 2 VASGKGGVG 10
+ASGKGG G
Sbjct: 11 IASGKGGTG 19


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VASGKGGVG 10
V SGKGGVG
Sbjct: 35 VLSGKGGVG 43


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 2 VASGKGGVG 10
V SGKGGVG
Sbjct: 35 VLSGKGGVG 43


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VASGKGGVG 10
V SGKGGVG
Sbjct: 35 VLSGKGGVG 43


>sp|CPGS_METST|CYCLIC 2,3-diphosphoglycerate synthetase|Methanosphaera stadtmanae (strain

Query: 1 VVASGKGG 8
VVA G+GG
Sbjct: 171 VVAMGRGG 178


>sp|Y823_METJA|UNCHARACTERIZED ATP-binding protein MJ0823|Methanocaldococcus jannaschii (strain

Query: 1 VVASGKGGVG 10
+ +GKGGVG
Sbjct: 3 IAITGKGGVG 12


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 3 ASGKGGVG 10
A+G+GGVG
Sbjct: 183 AAGRGGVG 190


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 3 ASGKGGVG 10
A+G+GGVG
Sbjct: 183 AAGRGGVG 190


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 3 ASGKGGVG 10
A+G+GGVG
Sbjct: 183 AAGRGGVG 190


>sp|CPGS_METTH|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermobacter

Query: 1 VVASGKGG 8
VVA G+GG
Sbjct: 171 VVAMGRGG 178


>sp|KADA_METKA|ADENYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 VVASGKGGVG 10
+VA+G GVG
Sbjct: 5 IVATGVPGVG 14


>sp|CPGS_METS3|CYCLIC 2,3-diphosphoglycerate synthetase|Methanobrevibacter smithii

Query: 1 VVASGKGG 8
V+A G+GG
Sbjct: 168 VIAMGRGG 175


>sp|NIFH1_METTL|NITROGENASE iron protein 1|Methanothermococcus thermolithotrophicus

Query: 1 VVASGKGGVG 10
V GKGG+G
Sbjct: 13 VAIYGKGGIG 22




16|Sequence|76|85|KGGVGKSTTA

>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain ATCC

Query: 1 KGGVGKSTTA 10
KGGVGKST A
Sbjct: 351 KGGVGKSTIA 360


Query: 1 KGGVGKSTTA 10
KGGVGKST +
Sbjct: 27 KGGVGKSTVS 36


>sp|NIFH_METMJ|NITROGENASE iron protein|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KGGVGKSTTA 10
KGG+GKSTTA
Sbjct: 9 KGGIGKSTTA 18


>sp|Y169_METJA|UNCHARACTERIZED ATP-binding protein MJ0169|Methanocaldococcus jannaschii (strain

Query: 1 KGGVGKSTTA 10
KGGVGK+TT+
Sbjct: 12 KGGVGKTTTS 21


>sp|Y3524_METJA|UNCHARACTERIZED protein MJECL24|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KGGVGKSTTA 10
KGGVGK+T A
Sbjct: 10 KGGVGKTTIA 19


>sp|NIFH_METHJ|NITROGENASE iron protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KGGVGKSTTA 10
KGG+GKSTT+
Sbjct: 9 KGGIGKSTTS 18


>sp|NIFH1_METTL|NITROGENASE iron protein 1|Methanothermococcus thermolithotrophicus

Query: 1 KGGVGKSTT 9
KGG+GKSTT
Sbjct: 18 KGGIGKSTT 26


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGGVGKSTTA 10
KGGVGKST A
Sbjct: 39 KGGVGKSTVA 48


>sp|NIFH1_METIV|NITROGENASE iron protein 1|Methanobacterium ivanovii

Query: 1 KGGVGKSTT 9
KGG+GKSTT
Sbjct: 10 KGGIGKSTT 18


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 1 KGGVGKSTTA 10
KGGVGKST A
Sbjct: 39 KGGVGKSTVA 48


>sp|NIFH_METJA|NITROGENASE iron protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KGGVGKSTTA 10
KGG+GKSTT
Sbjct: 9 KGGIGKSTTV 18


>sp|NIFH_METMP|NITROGENASE iron protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 KGGVGKSTT 9
KGG+GKSTT
Sbjct: 10 KGGIGKSTT 18


>sp|NIFH_METMI|NITROGENASE iron protein|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 KGGVGKSTT 9
KGG+GKSTT
Sbjct: 10 KGGIGKSTT 18


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGGVGKSTTA 10
KGGVGKST A
Sbjct: 39 KGGVGKSTVA 48


>sp|NIFH2_METTL|NITROGENASE iron protein 2|Methanothermococcus thermolithotrophicus

Query: 1 KGGVGKSTT 9
KGG+GKSTT
Sbjct: 9 KGGIGKSTT 17


>sp|NIFH1_METTM|NITROGENASE iron protein 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 KGGVGKSTT 9
KGG+GKSTT
Sbjct: 10 KGGIGKSTT 18


>sp|NIFH1_METBA|NITROGENASE iron protein 1|Methanosarcina barkeri

Query: 1 KGGVGKSTT 9
KGG+GKSTT
Sbjct: 10 KGGIGKSTT 18


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KGGVGKSTTA 10
KGGVGKS+ +
Sbjct: 16 KGGVGKSSIS 25


>sp|NIFH1_METTH|NITROGENASE iron protein 1|Methanothermobacter thermautotrophicus (strain

Query: 1 KGGVGKSTT 9
KGG+GKSTT
Sbjct: 10 KGGIGKSTT 18


>sp|NIFH_METAR|NITROGENASE iron protein|Methanocella arvoryzae (strain DSM 22066

Query: 1 KGGVGKSTT 9
KGG+GKSTT
Sbjct: 9 KGGIGKSTT 17


>sp|NIFH2_METBA|NITROGENASE iron protein 2|Methanosarcina barkeri

Query: 1 KGGVGKSTT 9
KGG+GKSTT
Sbjct: 9 KGGIGKSTT 17


>sp|RFCS_METS3|REPLICATION factor C small subunit|Methanobrevibacter smithii (strain ATCC

Query: 2 GGVGKSTTA 10
GVGK+TTA
Sbjct: 45 AGVGKTTTA 53


>sp|CFBC_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 1 KGGVGKSTTA 10
KGG+GKS+TA
Sbjct: 12 KGGIGKSSTA 21


>sp|CFBC_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 1 KGGVGKSTTA 10
KGG+GKS+TA
Sbjct: 12 KGGIGKSSTA 21


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM

Query: 1 KGGVGKSTT 9
KGGVGKST
Sbjct: 49 KGGVGKSTV 57


>sp|NIFH_METMA|NITROGENASE iron protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KGGVGKSTT 9
KGG+GKSTT
Sbjct: 9 KGGIGKSTT 17


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain

Query: 1 KGGVGKSTT 9
KGGVGKST
Sbjct: 48 KGGVGKSTV 56


>sp|KCY_HALWD|CYTIDYLATE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GVGKSTTA 10
G GKSTTA
Sbjct: 10 GAGKSTTA 17


>sp|Y410_METJA|UNCHARACTERIZED ATP-binding protein MJ0410|Methanocaldococcus jannaschii (strain

Query: 1 KGGVGKSTTA 10
+GG GK+T A
Sbjct: 9 QGGTGKTTVA 18


>sp|NIFH2_METIV|NITROGENASE iron protein 2|Methanobacterium ivanovii

Query: 1 KGGVGKSTTA 10
KGG+GKST
Sbjct: 10 KGGIGKSTIV 19


>sp|NIFH2_METTH|NITROGENASE iron protein 2|Methanothermobacter thermautotrophicus (strain

Query: 1 KGGVGKST 8
KGG+GKST
Sbjct: 9 KGGIGKST 16


>sp|GCH3_METTH|GTP cyclohydrolase III|Methanothermobacter thermautotrophicus (strain

Query: 1 KGGVGKSTTA 10
K G+GK+ TA
Sbjct: 212 KAGIGKAPTA 221


>sp|PGK2_THEKO|2-PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GVGKSTTA 10
GVGKST A
Sbjct: 100 GVGKSTIA 107


>sp|NIFH_METVO|NITROGENASE iron protein|Methanococcus voltae

Query: 1 KGGVGKST 8
KGG+GKST
Sbjct: 9 KGGIGKST 16


>sp|PGK2_PYRFU|2-PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GVGKSTTA 10
GVGKST A
Sbjct: 100 GVGKSTIA 107


>sp|Y685_METJA|UNCHARACTERIZED ATP-binding protein MJ0685|Methanocaldococcus jannaschii (strain

Query: 1 KGGVGKS 7
KGGVGK+
Sbjct: 8 KGGVGKT 14


>sp|RFCL_THEAC|REPLICATION factor C large subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 GVGKSTTA 10
G GK+TTA
Sbjct: 50 GTGKTTTA 57


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 3 GVGKSTTA 10
G GK+TTA
Sbjct: 49 GTGKTTTA 56


>sp|PGK2_PYRHO|2-PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GVGKSTTA 10
GVGKST A
Sbjct: 100 GVGKSTIA 107


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 GVGKSTT 9
GVGK+TT
Sbjct: 53 GVGKTTT 59


>sp|FTSY_SULAC|SIGNAL recognition particle receptor FtsY|Sulfolobus acidocaldarius

Query: 3 GVGKSTT 9
GVGK+TT
Sbjct: 183 GVGKTTT 189


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGGVGK 6
KGGVGK
Sbjct: 784 KGGVGK 789


>sp|RFCS_METTH|REPLICATION factor C small subunit|Methanothermobacter thermautotrophicus

Query: 2 GGVGKSTTA 10
GVGK+T A
Sbjct: 48 AGVGKTTAA 56


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GVGKSTT 9
GVGK+TT
Sbjct: 106 GVGKTTT 112


>sp|RFCS_METB6|REPLICATION factor C small subunit|Methanoregula boonei (strain DSM 21154

Query: 2 GGVGKSTTA 10
GVGK+T A
Sbjct: 48 AGVGKTTAA 56


>sp|RFCS_METVS|REPLICATION factor C small subunit|Methanococcus vannielii (strain ATCC 35089

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 46 GVGKTTAA 53


>sp|RFCS_METMP|REPLICATION factor C small subunit|Methanococcus maripaludis (strain DSM

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 46 GVGKTTAA 53


>sp|RFCS_METM7|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C7 /

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 46 GVGKTTAA 53


>sp|RFCS_METM6|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C6 /

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 46 GVGKTTAA 53


>sp|RFCS_METM5|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C5 /

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 46 GVGKTTAA 53


>sp|KAD6_PYRHO|PUTATIVE adenylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 10 GVGKTTVA 17


>sp|KAD6_METM7|PUTATIVE adenylate kinase|Methanococcus maripaludis (strain C7 /

Query: 3 GVGKSTTA 10
GVGKST +
Sbjct: 10 GVGKSTVS 17


>sp|PGK2_PYRAB|2-PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 GVGKSTTA 10
GVGKST A
Sbjct: 100 GVGKSTIA 107


>sp|SRP54_METKA|SIGNAL recognition particle 54 kDa|Methanopyrus kandleri (strain AV19 /

Query: 3 GVGKSTTA 10
G+GK+TTA
Sbjct: 111 GMGKTTTA 118


>sp|RFCS_METST|REPLICATION factor C small subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 GGVGKSTTA 10
GVGK+T A
Sbjct: 45 AGVGKTTCA 53


>sp|RFCS_METLZ|REPLICATION factor C small subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 GGVGKSTTA 10
GVGK+T A
Sbjct: 48 AGVGKTTCA 56


>sp|KAD6_PYRAB|PUTATIVE adenylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 10 GVGKTTIA 17


>sp|RFCS_METMJ|REPLICATION factor C small subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 GGVGKSTTA 10
G+GK+T A
Sbjct: 48 AGIGKTTAA 56


>sp|Y1662_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 KGGVGKST 8
K G GKST
Sbjct: 37 KSGAGKST 44


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 51 GVGKTTLA 58


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 51 GVGKTTLA 58


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 50 GVGKTTLA 57


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 50 GVGKTTLA 57


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 50 GVGKTTLA 57


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 50 GVGKTTLA 57


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 50 GVGKTTLA 57


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 50 GVGKTTLA 57


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GVGKST 8
GVGKST
Sbjct: 400 GVGKST 405


>sp|PSTK_METJA|L-SERYL-TRNA(SEC) kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GVGKST 8
GVGKST
Sbjct: 10 GVGKST 15


>sp|KTHY_CALMQ|PROBABLE thymidylate kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 GVGKST 8
GVGKST
Sbjct: 12 GVGKST 17


>sp|KADA_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 GVGKST 8
GVGKST
Sbjct: 12 GVGKST 17


>sp|KADA_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 3 GVGKST 8
GVGKST
Sbjct: 12 GVGKST 17


>sp|KADA_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GVGKST 8
GVGKST
Sbjct: 12 GVGKST 17


>sp|KADA_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 GVGKST 8
GVGKST
Sbjct: 12 GVGKST 17


>sp|KADA_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GVGKST 8
GVGKST
Sbjct: 12 GVGKST 17


>sp|KADA_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GVGKST 8
GVGKST
Sbjct: 12 GVGKST 17


>sp|KADA_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 GVGKST 8
GVGKST
Sbjct: 12 GVGKST 17


>sp|Y823_METJA|UNCHARACTERIZED ATP-binding protein MJ0823|Methanocaldococcus jannaschii (strain

Query: 1 KGGVGKSTTA 10
KGGVGK+ A
Sbjct: 8 KGGVGKTFIA 17


>sp|XACJ_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacJ|Haloferax volcanii (strain ATCC

Query: 3 GVGKSTT 9
G GKSTT
Sbjct: 39 GCGKSTT 45


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GVGKSTT 9
GVGK+TT
Sbjct: 14 GVGKTTT 20


>sp|KAD6_PYRFU|PUTATIVE adenylate kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 10 GVGKTTVA 17


>sp|Y084_METJA|UNCHARACTERIZED ATP-binding protein MJ0084|Methanocaldococcus jannaschii (strain

Query: 1 KGGVGKST 8
KGG GKS+
Sbjct: 8 KGGCGKSS 15


>sp|SRP54_PYRCJ|SIGNAL recognition particle 54 kDa|Pyrobaculum calidifontis (strain DSM

Query: 3 GVGKSTTA 10
G GK+TTA
Sbjct: 108 GSGKTTTA 115


>sp|Y719_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 KGGVGKST 8
+ G+GKST
Sbjct: 118 QNGIGKST 125


>sp|G3P2_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GGVGKSTTA 10
GG+GKS A
Sbjct: 89 GGIGKSNKA 97


>sp|RFCS_NATPD|REPLICATION factor C small subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GGVGKSTTA 10
GVGK+T A
Sbjct: 54 AGVGKTTAA 62


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GVGKSTTA 10
GVGK+T A
Sbjct: 12 GVGKTTIA 19




17|Sequence|81|90|KSTTAVNLAL

>sp|NIFH_METMJ|NITROGENASE iron protein|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KSTTAVNLA 9
KSTTA NL+
Sbjct: 14 KSTTAANLS 22


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KSTTAVNL 8
KST AVNL
Sbjct: 44 KSTVAVNL 51


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KSTTAVNL 8
KST AVNL
Sbjct: 44 KSTVAVNL 51


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 1 KSTTAVNL 8
KST AVNL
Sbjct: 44 KSTVAVNL 51


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain

Query: 1 KSTTAVNLA 9
KST VNLA
Sbjct: 53 KSTVTVNLA 61


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM

Query: 1 KSTTAVNLA 9
KST VNLA
Sbjct: 54 KSTVTVNLA 62


>sp|NIFH_METHJ|NITROGENASE iron protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KSTTAVNLA 9
KSTT+ NL+
Sbjct: 14 KSTTSANLS 22


>sp|NIFH2_METTL|NITROGENASE iron protein 2|Methanothermococcus thermolithotrophicus

Query: 1 KSTTAVNLA 9
KSTT N+A
Sbjct: 14 KSTTVCNIA 22




18|Sequence|86|95|VNLALALAAN

***** No hits found ******


19|Sequence|91|100|ALAANDSSKA

>sp|PURQ_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ALAANDSSK 9
ALA NDSS+
Sbjct: 132 ALAMNDSSR 140


>sp|THII_THEVO|TRNA sulfurtransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ALAANDSSK 9
ALA ND+SK
Sbjct: 419 ALAINDTSK 427


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ALAANDSSK 9
ALA ND SK
Sbjct: 255 ALAGNDGSK 263




20|Sequence|96|105|DSSKAIGLLD

>sp|Y3518_METJA|UNCHARACTERIZED protein MJECL18|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DSSKAIGL 8
DSSKAI L
Sbjct: 114 DSSKAIAL 121


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 1 DSSKAIGLL 9
D KA+GLL
Sbjct: 283 DKGKAVGLL 291


>sp|UPPS_SULAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (GGDP specific)|Sulfolobus acidocaldarius (strain ATCC

Query: 4 KAIGLLD 10
KAIG+LD
Sbjct: 125 KAIGMLD 131




21|Sequence|101|110|IGLLDVDVYG

>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GLLDVDVY 9
GLLDVD Y
Sbjct: 398 GLLDVDAY 405


>sp|ARDF_PYRFU|ARCHAEAL ribosome dimerization factor|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IGLLDVDVYG 10
IGL+DV YG
Sbjct: 199 IGLVDVAFYG 208


>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 1 IGLLDVDVYG 10
+ L+D+D YG
Sbjct: 144 VSLIDIDPYG 153


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain

Query: 1 IGLLDVDVYG 10
+G+LD D++G
Sbjct: 71 VGVLDADIHG 80


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 1 IGLLDVDVYG 10
+G+LD D++G
Sbjct: 62 VGILDADIHG 71


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IGLLDVDVYG 10
+G+LD D++G
Sbjct: 62 VGILDADIHG 71


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IGLLDVDVYG 10
+G+LD D++G
Sbjct: 62 VGILDADIHG 71


>sp|PGK_PYRAE|PHOSPHOGLYCERATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GLLDVDVY 9
G LDVD+Y
Sbjct: 290 GRLDVDIY 297


>sp|FTSZ1_ARCFU|CELL division protein FtsZ 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LLDVDVYG 10
LLDVDV G
Sbjct: 279 LLDVDVSG 286


>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 1 IGLLDVDVYG 10
+G++DVD +G
Sbjct: 76 VGIVDVDFHG 85


>sp|TRPB_PYRAR|TRYPTOPHAN synthase beta chain|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GLLDVDVY 9
GLLD D Y
Sbjct: 398 GLLDSDAY 405


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 3 LLDVDVY 9
L+DVDVY
Sbjct: 119 LIDVDVY 125


>sp|TRPB_PYRAE|TRYPTOPHAN synthase beta chain|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GLLDVDVY 9
GLLD D Y
Sbjct: 398 GLLDSDAY 405


>sp|Y614A_NATPD|UNCHARACTERIZED protein NP_0614A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GLLDVDVY 9
G LDVD+Y
Sbjct: 47 GTLDVDIY 54


>sp|FTSZ1_PYRHO|CELL division protein FtsZ 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LLDVDVYG 10
LLDVD+ G
Sbjct: 278 LLDVDISG 285


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM

Query: 1 IGLLDVDVYG 10
+G+LD D++G
Sbjct: 72 VGVLDGDIHG 81


>sp|MTAD_HALMA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IGLLDVDVY 9
IGLLD D Y
Sbjct: 237 IGLLDGDTY 245


>sp|FTSZ1_PYRWO|CELL division protein FtsZ 1|Pyrococcus woesei

Query: 3 LLDVDVYG 10
LLDVD+ G
Sbjct: 272 LLDVDISG 279


>sp|Y1515_METJA|UNCHARACTERIZED protein MJ1515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LLDVDVYG 10
LLD++ YG
Sbjct: 157 LLDINYYG 164


>sp|FTSZ1_PYRAB|CELL division protein FtsZ 1|Pyrococcus abyssi (strain GE5 /

Query: 3 LLDVDVYG 10
LLDVD+ G
Sbjct: 278 LLDVDISG 285


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 5 DVDVYG 10
DVDVYG
Sbjct: 328 DVDVYG 333


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 GLLDVDV 8
GL+DVD+
Sbjct: 197 GLVDVDI 203


>sp|PDXT_PYRCJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum calidifontis (strain

Query: 1 IGLLDVDV 8
+GLLDV V
Sbjct: 104 LGLLDVSV 111


>sp|FTSZ1_THEKO|CELL division protein FtsZ 1|Thermococcus kodakarensis (strain ATCC

Query: 3 LLDVDVYG 10
LLDVD+ G
Sbjct: 278 LLDVDISG 285


>sp|FTSZ1_PYRFU|CELL division protein FtsZ 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LLDVDVYG 10
LLDVD+ G
Sbjct: 278 LLDVDISG 285


>sp|COBQ_PICTO|PROBABLE cobyric acid synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 IGLLDVDVY 9
+GLLD++ Y
Sbjct: 345 LGLLDIETY 353


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IGLLDVDVYG 10
IG+LD D G
Sbjct: 537 IGILDADKEG 546


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IGLLDVDVYG 10
IG+LD D G
Sbjct: 537 IGILDADKEG 546


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LLDVDVYG 10
L+D+DV G
Sbjct: 24 LIDIDVIG 31


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GLLDVDV 8
GLLDVD+
Sbjct: 246 GLLDVDI 252


>sp|Y730_METJA|UNCHARACTERIZED protein MJ0730|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LDVDVY 9
LDVD+Y
Sbjct: 31 LDVDIY 36


>sp|Y410_METJA|UNCHARACTERIZED ATP-binding protein MJ0410|Methanocaldococcus jannaschii (strain

Query: 3 LLDVDVYG 10
L+D D+YG
Sbjct: 33 LIDCDIYG 40




22|Sequence|106|115|VDVYGPSVPK

>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 1 VDVYGPSVPK 10
VD +GPSVPK
Sbjct: 81 VDFHGPSVPK 90


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain

Query: 2 DVYGPSVPK 10
D++GP++PK
Sbjct: 77 DIHGPNIPK 85


>sp|MCRW_METFV|METHYL-COENZYME M reductase II operon|Methanothermus fervidus (strain ATCC 43054

Query: 3 VYGPSVPK 10
V+GPS+PK
Sbjct: 43 VHGPSIPK 50


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM

Query: 2 DVYGPSVPK 10
D++GP++P+
Sbjct: 78 DIHGPNIPQ 86


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VDVYGP 6
VDVYGP
Sbjct: 329 VDVYGP 334


>sp|TRMBR_THELN|HTH-TYPE sugar sensing transcriptional regulator|Thermococcus litoralis

Query: 3 VYGPSVPK 10
VYGPS K
Sbjct: 29 VYGPSTAK 36


>sp|TRMBR_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus

Query: 3 VYGPSVPK 10
VYGPS K
Sbjct: 29 VYGPSTAK 36


>sp|GATA_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 3 VYGPSVPK 10
+ GP+VPK
Sbjct: 380 IVGPTVPK 387


>sp|GATA_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus vannielii (strain ATCC

Query: 3 VYGPSVPK 10
+ GP+VPK
Sbjct: 355 IVGPTVPK 362


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VDVYGPS 7
VDV+GP+
Sbjct: 816 VDVFGPT 822


>sp|GGR_HALVD|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Haloferax volcanii (strain ATCC 29605

Query: 1 VDVYGPSVP 9
+D GPS P
Sbjct: 145 IDATGPSAP 153


>sp|GATA_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 3 VYGPSVPK 10
+ GP+VPK
Sbjct: 380 IAGPTVPK 387


>sp|PGK_METKA|PHOSPHOGLYCERATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 DVYGPSVPK 10
DV+GP+ K
Sbjct: 92 DVFGPTAKK 100


>sp|SYH_HALLT|HISTIDINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VDVYGPSVPK 10
+DV+G S P+
Sbjct: 124 IDVFGSSAPE 133


>sp|MCRW_METTH|METHYL-COENZYME M reductase II operon|Methanothermobacter thermautotrophicus

Query: 3 VYGPSVP 9
V+GPS+P
Sbjct: 41 VHGPSIP 47


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DVYGPSVPK 10
D++GP+V K
Sbjct: 68 DIHGPNVAK 76


>sp|GATA_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanothermobacter thermautotrophicus

Query: 3 VYGPSVPK 10
+ GP+VPK
Sbjct: 379 IAGPTVPK 386


>sp|IORB_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorB|Thermococcus kodakarensis (strain

Query: 2 DVYGPSVPK 10
DVYG VP+
Sbjct: 58 DVYGAMVPE 66


>sp|Y954_METVS|UNCHARACTERIZED solute-binding protein Mevan_0954|Methanococcus vannielii (strain

Query: 3 VYGPSVPK 10
VYG +VPK
Sbjct: 273 VYGLTVPK 280


>sp|IORB_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus abyssi (strain GE5 /

Query: 2 DVYGPSVPK 10
DVYG VP+
Sbjct: 58 DVYGAMVPE 66


>sp|IORB_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus horikoshii (strain ATCC

Query: 2 DVYGPSVPK 10
DVYG VP+
Sbjct: 58 DVYGAMVPE 66


>sp|DP2S_HALSA|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 2 DVYGPSVPK 10
D+Y P VP+
Sbjct: 234 DIYFPEVPR 242


>sp|DP2S_HALS3|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 2 DVYGPSVPK 10
D+Y P VP+
Sbjct: 234 DIYFPEVPR 242


>sp|HPPA1_METAC|PUTATIVE K(+)-stimulated pyrophosphate-energized sodium pump|Methanosarcina

Query: 1 VDVYGP 6
VD YGP
Sbjct: 425 VDAYGP 430


>sp|RS6E_METAR|SMALL ribosomal subunit protein eS6|Methanocella arvoryzae (strain DSM

Query: 1 VDVYGPSVPK 10
VDV GP V K
Sbjct: 19 VDVTGPRVNK 28


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 1 VDVYGP 6
VD YGP
Sbjct: 425 VDAYGP 430


>sp|Y1880_METMJ|UNCHARACTERIZED solute-binding protein Memar_1880|Methanoculleus marisnigri (strain

Query: 3 VYGPSVPK 10
VYG +VPK
Sbjct: 295 VYGVTVPK 302


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 3 VYGPSVPK 10
+ GP+VPK
Sbjct: 355 IVGPTVPK 362


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 3 VYGPSVPK 10
+ GP+VPK
Sbjct: 355 IVGPTVPK 362


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 3 VYGPSVPK 10
+ GP+VPK
Sbjct: 355 IVGPTVPK 362


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 3 VYGPSVPK 10
+ GP+VPK
Sbjct: 355 IVGPTVPK 362


>sp|KPRS_METJA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VYGPSVPK 10
+YG +VPK
Sbjct: 138 IYGDAVPK 145


>sp|WTPA_ARCFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VYGPSVPK 10
VYG ++PK
Sbjct: 284 VYGITIPK 291


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 2 DVYGPSVPK 10
D++GP+V K
Sbjct: 68 DIHGPNVAK 76




23|Sequence|111|120|PSVPKMMNLK

>sp|IDI2_PYRIL|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PSVPKMMNL 9
PSVPK+ NL
Sbjct: 115 PSVPKVANL 123


>sp|IDI2_PYRAR|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PSVPKMMNL 9
PS+PK+ NL
Sbjct: 115 PSIPKIANL 123


>sp|IDI2_PYRNV|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PSVPKMMNL 9
P+VPK+ NL
Sbjct: 115 PTVPKVANL 123


>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 1 PSVPKMMNLK 10
PSVPKM+ ++
Sbjct: 86 PSVPKMLGVR 95


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 1 PSVPKMMNL 9
PS+ ++MNL
Sbjct: 344 PSLSRLMNL 352


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PSVPKMMNL 9
PS+ ++MNL
Sbjct: 344 PSLSRLMNL 352


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PSVPKMMNL 9
PS+ ++MNL
Sbjct: 344 PSLSRLMNL 352


>sp|AATB_METB6|A-TYPE ATP synthase subunit B|Methanoregula boonei (strain DSM 21154

Query: 1 PSVPKMMNL 9
PS+ ++MNL
Sbjct: 344 PSLSRLMNL 352


>sp|AATB_METLZ|A-TYPE ATP synthase subunit B|Methanocorpusculum labreanum (strain ATCC

Query: 1 PSVPKMMNL 9
PS+ ++MNL
Sbjct: 344 PSLSRLMNL 352


>sp|CMR1A_PYRFU|CRISPR system Cmr subunit Cmr1-1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SVPKMMNLK 10
S PK +NLK
Sbjct: 80 SSPKRLNLK 88


>sp|Y1341_METJA|UNCHARACTERIZED protein MJ1341|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PKMMNLK 10
PK++NLK
Sbjct: 76 PKLLNLK 82


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain

Query: 1 PSVPKMMNLK 10
P++PKM+ ++
Sbjct: 81 PNIPKMLGVE 90




24|Sequence|116|125|MMNLKGNPEL

>sp|IF6_METTH|TRANSLATION initiation factor 6|Methanothermobacter thermautotrophicus

Query: 2 MNLKGNPEL 10
+NL GNP L
Sbjct: 5 INLSGNPNL 13


>sp|BIOW_METM7|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 MMNLKGNPEL 10
++NLKGN E+
Sbjct: 208 ILNLKGNGEV 217


>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 3 NLKGNPE 9
+L+GNPE
Sbjct: 95 HLEGNPE 101


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 MMNLKGNPE 9
M+ L+G PE
Sbjct: 504 MLGLEGEPE 512


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 2 MNLKGNP 8
+NL GNP
Sbjct: 433 INLSGNP 439


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MMNLKGNPE 9
++N+KG P+
Sbjct: 214 LINIKGKPD 222


>sp|GLMU_METM7|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C7 /

Query: 1 MMNLKGNP 8
M+N+KG P
Sbjct: 340 MVNIKGKP 347


>sp|KORB_METTM|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter marburgensis (strain

Query: 2 MNLKGNPEL 10
MN+K NP L
Sbjct: 1 MNVKENPYL 9




25|Sequence|121|130|GNPELSQSNL

>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GNPELSQ 7
G+PELSQ
Sbjct: 226 GDPELSQ 232


>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NPELSQS 8
NPELS+S
Sbjct: 337 NPELSES 343


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM

Query: 2 NPELSQSNL 10
NPEL +NL
Sbjct: 40 NPELFSNNL 48


>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 PELSQSNL 10
PE+++SNL
Sbjct: 129 PEINRSNL 136




26|Sequence|126|135|SQSNLMRPLL

***** No hits found ******


27|Sequence|131|140|MRPLLNYGIA

>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MRPLLNYGI 9
++PL NYG+
Sbjct: 103 VKPLFNYGL 111


>sp|MTAD2_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MRPLLNYGIA 10
MR +L YG+A
Sbjct: 132 MRAVLGYGMA 141


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MRPLLNYGIA 10
+ PLLN GI
Sbjct: 344 LSPLLNVGIG 353


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 MRPLLNYGIA 10
+ PLLN GI
Sbjct: 344 LSPLLNVGIG 353


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MRPLLNYGIA 10
+ PLLN GI
Sbjct: 344 LSPLLNIGIG 353


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 3 PLLNYG 8
PL+NYG
Sbjct: 586 PLMNYG 591


>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC

Query: 1 MRPLLNYGI 9
M P L YGI
Sbjct: 1 MNPFLKYGI 9


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MRPLLNYGIA 10
+ PLLN G+A
Sbjct: 312 LSPLLNKGVA 321


>sp|AKSF_METJA|HOMOISOCITRATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MRPLLNYGIA 10
+RP+ N+GI
Sbjct: 96 VRPINNFGIG 105


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MRPLLNYGIA 10
+ P +N+G+A
Sbjct: 151 LEPTINFGMA 160


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 MRPLLNYGIA 10
+ P +N+G+A
Sbjct: 151 LEPTINFGMA 160


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MRPLLNYGIA 10
+ P +N+G+A
Sbjct: 151 LEPTINFGMA 160


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 4 LLNYGIA 10
LLNYG A
Sbjct: 199 LLNYGYA 205




28|Sequence|136|145|NYGIACMSMG

>sp|MTM1_METJA|TYPE II methyltransferase M.MjaI|Methanocaldococcus jannaschii (strain

Query: 3 GIACMSMG 10
GIAC+++G
Sbjct: 100 GIACINIG 107


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 YGIACMSMG 10
YG AC++ G
Sbjct: 43 YGGACLNRG 51




29|Sequence|141|150|CMSMGFLVEE

>sp|KPRS_AERPE|RIBOSE-PHOSPHATE pyrophosphokinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 CMSMGFLVEE 10
C S G+LV+E
Sbjct: 191 CRSYGYLVKE 200


>sp|RL18E_METTH|LARGE ribosomal subunit protein eL18|Methanothermobacter

Query: 1 CMSMGFLVEE 10
C+++G +VEE
Sbjct: 101 CLTLGKIVEE 110


>sp|RNZ_METS5|RIBONUCLEASE Z|Metallosphaera sedula (strain ATCC 51363

Query: 3 SMGFLVEE 10
S G+LVEE
Sbjct: 136 SQGYLVEE 143


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 CMSMGFLVEE 10
CM GF ++E
Sbjct: 585 CMMHGFTLDE 594


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CMSMGFLVEE 10
CM GF ++E
Sbjct: 592 CMMHGFTLDE 601


>sp|PUR5_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 MSMGFLV 8
M MGFLV
Sbjct: 292 MGMGFLV 298


>sp|RL11_ARCFU|LARGE ribosomal subunit protein uL11|Archaeoglobus fulgidus (strain ATCC

Query: 1 CMSMGFLVE 9
C SMG VE
Sbjct: 128 CNSMGITVE 136


>sp|FLUC1_METHJ|FLUORIDE-SPECIFIC ion channel FluC 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CMSMGFLVEE 10
C+++GFL+ E
Sbjct: 59 CIAIGFLMYE 68




30|Sequence|146|155|FLVEESEPVV

>sp|PMDHS_PYRAB|PHOSPHOMEVALONATE dehydratase small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 LVEESEPVV 10
+VEE+EP+V
Sbjct: 83 IVEEAEPIV 91


>sp|Y2132_NATPD|UPF0173 metal-dependent hydrolase NP_2132A|Natronomonas pharaonis (strain

Query: 1 FLVEESEP 8
F+V ESEP
Sbjct: 128 FVVSESEP 135


>sp|PMDHS_PYRHO|PHOSPHOMEVALONATE dehydratase small subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 LVEESEPVV 10
+VEE+EP+V
Sbjct: 83 IVEEAEPIV 91


>sp|QUED_HALS3|PROBABLE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Halobacterium

Query: 1 FLVEESEPVV 10
FL+E+ +P+V
Sbjct: 83 FLLEDGDPLV 92


>sp|RS4E_METM6|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain C6

Query: 1 FLVEESEPVV 10
F+V + EPV+
Sbjct: 233 FIVGQDEPVI 242


>sp|G6PI_THELI|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus litoralis

Query: 2 LVEESEPVV 10
+VEE +PVV
Sbjct: 44 MVEEGDPVV 52


>sp|RS4E_METMP|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain DSM

Query: 1 FLVEESEPVV 10
F+V + EPV+
Sbjct: 233 FIVGQDEPVI 242


>sp|RS4E_METM7|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain C7

Query: 1 FLVEESEPVV 10
F+V + EPV+
Sbjct: 233 FIVGQDEPVI 242


>sp|RS4E_METM5|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain C5

Query: 1 FLVEESEPVV 10
F+V + EPV+
Sbjct: 233 FIVGQDEPVI 242


>sp|ISF1_ARCFU|IRON-SULFUR flavoprotein AF_1436|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LVEESEPVV 10
LVEES+ V+
Sbjct: 71 LVEESDAVI 79


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FLVEESEPV 9
F++E SEP+
Sbjct: 420 FIIELSEPI 428


>sp|RS4E_METVS|SMALL ribosomal subunit protein eS4|Methanococcus vannielii (strain ATCC

Query: 1 FLVEESEPVV 10
F+V + EPV+
Sbjct: 233 FIVGQDEPVI 242


>sp|RS4E_METVA|SMALL ribosomal subunit protein eS4|Methanococcus vannielii

Query: 1 FLVEESEPVV 10
F+V + EPV+
Sbjct: 233 FIVGQDEPVI 242




31|Sequence|151|160|SEPVVWRGLM

>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 3 PVVWRG 8
PVVWRG
Sbjct: 130 PVVWRG 135


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EPVVWRG 8
+PV+WRG
Sbjct: 124 QPVIWRG 130


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 2 EPVVWRGLM 10
+P++WRG +
Sbjct: 124 QPIIWRGAL 132


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PVVWRG 8
PV+WRG
Sbjct: 125 PVIWRG 130


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EPVVWRG 8
+P++WRG
Sbjct: 124 QPIIWRG 130


>sp|AROA_METTH|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanothermobacter thermautotrophicus

Query: 2 EPVVWRGL 9
EP V+RGL
Sbjct: 219 EPAVYRGL 226


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 3 PVVWRG 8
P++WRG
Sbjct: 126 PIIWRG 131


>sp|Y652_METJA|PROBABLE RNA-binding protein MJ0652|Methanocaldococcus jannaschii (strain

Query: 2 EPVVWRG 8
EPVVW G
Sbjct: 29 EPVVWVG 35


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 2 EPVVWRGLM 10
EP RGLM
Sbjct: 123 EPATMRGLM 131


>sp|FEN_METB6|FLAP endonuclease 1|Methanoregula boonei (strain DSM 21154

Query: 3 PVVWRGL 9
PV W GL
Sbjct: 15 PVTWEGL 21


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 SEPVVWRGLM 10
+ PVVW G++
Sbjct: 192 NNPVVWHGIV 201


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 PVVWRG 8
P VWRG
Sbjct: 269 PTVWRG 274


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 3 PVVWRG 8
P VWRG
Sbjct: 269 PTVWRG 274


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 2 EPVVWRGLM 10
EP RGLM
Sbjct: 117 EPATMRGLM 125


>sp|Y1069_METJA|UNCHARACTERIZED glycosyltransferase MJ1069|Methanocaldococcus jannaschii (strain

Query: 3 PVVWRGL 9
P+++RGL
Sbjct: 185 PIIYRGL 191


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 SEPVVWRG 8
SEP +WR
Sbjct: 258 SEPDLWRA 265


>sp|COBD_ARCFU|PROBABLE cobalamin biosynthesis protein CobD|Archaeoglobus fulgidus

Query: 3 PVVWRG 8
PVVW G
Sbjct: 27 PVVWYG 32


>sp|PYRH_HALLT|URIDYLATE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 EPVVWRG 8
EP+ W G
Sbjct: 231 EPIYWTG 237


>sp|Y133_THEAC|PUTATIVE quercetin 2,3-dioxygenase Ta0133|Thermoplasma acidophilum (strain

Query: 1 SEPVVWRG 8
+EP+ W G
Sbjct: 223 NEPIAWYG 230


>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PVVWRGL 9
P +WRG+
Sbjct: 320 PHIWRGI 326


>sp|RNH2_PYRNV|RIBONUCLEASE HII|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 VWRGLM 10
VWRGL+
Sbjct: 76 VWRGLL 81


>sp|DHYS_IGNH4|PROBABLE deoxyhypusine synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PVVWRGLM 10
P++W G++
Sbjct: 306 PIIWAGVL 313




32|Sequence|156|165|WRGLMVMSAI

>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 1 WRGLMVMSAI 10
WRG + SAI
Sbjct: 133 WRGAIKHSAI 142


>sp|THIM_NATPD|HYDROXYETHYLTHIAZOLE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 WRGLMVMS 8
W GL VMS
Sbjct: 43 WGGLPVMS 50


>sp|THIM_HALWD|HYDROXYETHYLTHIAZOLE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 WRGLMVMS 8
W GL VMS
Sbjct: 49 WGGLPVMS 56




33|Sequence|161|170|VMSAIEKLLR

>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 1 VMSAIEKLLR 10
V +AIE+LLR
Sbjct: 123 VKAAIERLLR 132


>sp|PURQ_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 AIEKLLR 10
A+EKLLR
Sbjct: 202 AVEKLLR 208


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VMSAIEKLL 9
VMSA+E +L
Sbjct: 108 VMSAVEAIL 116


>sp|ARLY_PYRIL|ARGININOSUCCINATE lyase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VMSAIEKLLR 10
V+ A+EKLL+
Sbjct: 176 VLKAVEKLLK 185


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 1 VMSAIEKLLR 10
V+ A+E++LR
Sbjct: 737 VLPAVERILR 746


>sp|PELO_METTH|PROTEIN pelota homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 MSAIEKLL 9
M A+EKLL
Sbjct: 293 MGAVEKLL 300


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 1 VMSAIEKLLR 10
V+ A+E++LR
Sbjct: 737 VLPAVERILR 746


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VMSAIEKLLR 10
V+ A+E++LR
Sbjct: 1634 VLPAVERILR 1643


>sp|Y1608_METJA|UNCHARACTERIZED protein MJ1608|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MSAIEKLLR 10
+S IEK+LR
Sbjct: 26 LSQIEKILR 34


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 VMSAIEKLLR 10
V+ A+E++LR
Sbjct: 1661 VLPAVERILR 1670


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 1 VMSAIEKLLR 10
V+ A+E++LR
Sbjct: 737 VLPAVERILR 746


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 VMSAIEKLLR 10
V+ A+E++LR
Sbjct: 737 VLPAVERILR 746


>sp|PELO_METST|PROTEIN pelota homolog|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 MSAIEKLL 9
M A+EKLL
Sbjct: 292 MGAVEKLL 299




34|Sequence|166|175|EKLLRQVDWG

>sp|Y062_PYRAR|MEMO1 family protein Pars_0062|Pyrobaculum arsenaticum (strain DSM

Query: 1 EKLLRQVDW 9
EKL++Q+DW
Sbjct: 18 EKLIQQIDW 26


>sp|Y1105_PYRIL|MEMO1 family protein Pisl_1105|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EKLLRQVDWG 10
EKLL+Q++W
Sbjct: 18 EKLLQQLEWA 27


>sp|HIS2_PYRFU|HISTIDINE biosynthesis bifunctional protein HisIE|Pyrococcus furiosus

Query: 1 EKLLRQVDW 9
EKLL QV+W
Sbjct: 4 EKLLEQVNW 12


>sp|TSR3_METBU|16S rRNA aminocarboxypropyltransferase|Methanococcoides burtonii

Query: 1 EKLLRQVDWG 10
EK+L + +WG
Sbjct: 133 EKILSKFNWG 142


>sp|TSR3_METBF|16S rRNA aminocarboxypropyltransferase|Methanosarcina barkeri (strain

Query: 1 EKLLRQVDWG 10
EK+L + +WG
Sbjct: 133 EKVLSKFNWG 142


>sp|FEN_THEPD|FLAP endonuclease 1|Thermofilum pendens (strain DSM 2475

Query: 1 EKLLRQVDWG 10
EK+ R V+W
Sbjct: 263 EKIFRSVEWS 272


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 1 EKLLRQVDW 9
E L+R+V W
Sbjct: 247 EALIREVRW 255


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM

Query: 1 EKLLRQVDW 9
+KL +Q++W
Sbjct: 17 DKLKKQIEW 25


>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EKLLRQVDWG 10
E+L+R +D+G
Sbjct: 356 EELMRSLDFG 365


>sp|TSR3_METAC|16S rRNA aminocarboxypropyltransferase|Methanosarcina acetivorans

Query: 1 EKLLRQVDWG 10
EK++ + +WG
Sbjct: 134 EKVMSKFNWG 143


>sp|Y992_IGNH4|MEMO1 family protein Igni_0992|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EKLLRQVDW 9
E+L+R ++W
Sbjct: 18 EELIRLIEW 26


>sp|TSR3_METMA|16S rRNA aminocarboxypropyltransferase|Methanosarcina mazei (strain

Query: 1 EKLLRQVDWG 10
EK++ + +WG
Sbjct: 133 EKVMSKFNWG 142


>sp|FPOI_METMA|F(420)H(2) dehydrogenase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EKLLRQVD 8
EKL R+VD
Sbjct: 163 EKLAREVD 170


>sp|MTNA_METAC|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosarcina acetivorans

Query: 3 LLRQVDW 9
L+R +DW
Sbjct: 9 LMRTIDW 15


>sp|CAS1A_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LLRQVDWG 10
+LR+V WG
Sbjct: 252 MLRKVVWG 259




35|Sequence|171|180|QVDWGQLDYL

>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 2 VDWGQLDYL 10
V+WG+LDYL
Sbjct: 149 VNWGELDYL 157


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 2 VDWGQLDYL 10
V+WG+LD+L
Sbjct: 145 VNWGELDFL 153


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VDWGQLDYL 10
V WG+LDYL
Sbjct: 144 VVWGELDYL 152


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VDWGQLDYL 10
V WG LD++
Sbjct: 144 VKWGSLDFM 152


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 2 VDWGQLDYL 10
V WG LD++
Sbjct: 144 VKWGSLDFM 152


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VDWGQLDYL 10
V WG+LD++
Sbjct: 144 VMWGELDFM 152


>sp|AROB_PYRIL|3-DEHYDROQUINATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 DWGQLDY 9
DWG L+Y
Sbjct: 192 DWGALEY 198


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 QVDWGQLD 8
+VD+GQ+D
Sbjct: 160 EVDYGQVD 167


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 DWGQLDYL 10
D G+LDYL
Sbjct: 636 DMGRLDYL 643


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 3 DWGQLDYL 10
DW +LD L
Sbjct: 597 DWSELDTL 604


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VDWGQLDYL 10
++ G+LDYL
Sbjct: 1032 IERGELDYL 1040


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WGQLDYL 10
WG L+Y+
Sbjct: 258 WGALEYI 264


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VDWGQLDY 9
+DW DY
Sbjct: 98 IDWSNKDY 105


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 WGQLDY 9
WG +DY
Sbjct: 98 WGLMDY 103


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 2 VDWGQL 7
VDWG+L
Sbjct: 146 VDWGEL 151


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 4 WGQLDYL 10
WG L+Y+
Sbjct: 261 WGALEYI 267




36|Sequence|176|185|QLDYLVVDMP

>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 1 QLDYLVVDMP 10
+LDYL++DMP
Sbjct: 153 ELDYLIIDMP 162


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QLDYLVVDMP 10
+LDYL++D P
Sbjct: 148 ELDYLLIDTP 157


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LDYLVVDMP 10
+DY V+D+P
Sbjct: 275 IDYTVIDIP 283


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 QLDYLVVDMP 10
+LD+L++D P
Sbjct: 149 ELDFLLIDTP 158


>sp|Y4342_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 DYLVVDMP 10
DYLV+D P
Sbjct: 158 DYLVLDEP 165


>sp|Y1038_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 3 DYLVVDMP 10
DYLV+D P
Sbjct: 158 DYLVLDEP 165


>sp|ENGB_METJA|PROBABLE GTP-binding protein EngB|Methanocaldococcus jannaschii (strain

Query: 3 DYLVVDMP 10
+Y++VDMP
Sbjct: 69 EYILVDMP 76


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QLDYLVVDMP 10
+LD++++D P
Sbjct: 148 ELDFMIIDFP 157


>sp|DNAG_METMP|DNA primase DnaG|Methanococcus maripaludis (strain DSM 14266

Query: 1 QLDYLVVDMP 10
++D+ DMP
Sbjct: 387 KMDFFAADMP 396


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 QLDYLVVD 8
Q DY+VVD
Sbjct: 325 QADYVVVD 332


>sp|EF1A_METS3|ELONGATION factor 1-alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 QLDYLVVDMP 10
+ DY VVD P
Sbjct: 74 KYDYTVVDCP 83


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 2 LDYLVVDMP 10
LD++++D P
Sbjct: 149 LDFMIIDFP 157


>sp|DNAG_METM5|DNA primase DnaG|Methanococcus maripaludis (strain C5 /

Query: 1 QLDYLVVDMP 10
++D+ DMP
Sbjct: 389 KMDFFAADMP 398


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 3 DYLVVDMP 10
DYL+V++P
Sbjct: 315 DYLIVEVP 322


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LDYLVVDMP 10
LD++++D P
Sbjct: 149 LDFMIIDFP 157


>sp|DTDA_HALSA|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 700922

Query: 4 YLVVDMP 10
YLVV++P
Sbjct: 300 YLVVELP 306


>sp|DTDA_HALS3|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 29341

Query: 4 YLVVDMP 10
YLVV++P
Sbjct: 300 YLVVELP 306


>sp|DNAG_METM7|DNA primase DnaG|Methanococcus maripaludis (strain C7 /

Query: 1 QLDYLVVDMP 10
++D+ DMP
Sbjct: 390 KMDFFAADMP 399


>sp|DNAG_METM6|DNA primase DnaG|Methanococcus maripaludis (strain C6 /

Query: 1 QLDYLVVDMP 10
++D+ DMP
Sbjct: 389 KMDFFAADMP 398


>sp|GFPS_METMA|GERANYLFARNESYL diphosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DYLVVDM 9
DY+ VDM
Sbjct: 285 DYITVDM 291


>sp|Y169_METJA|UNCHARACTERIZED ATP-binding protein MJ0169|Methanocaldococcus jannaschii (strain

Query: 2 LDYLVVDMP 10
DY+++D P
Sbjct: 112 FDYVIIDAP 120


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 3 DYLVVD 8
DYLVVD
Sbjct: 155 DYLVVD 160


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 DYLVVDMP 10
D++V+D+P
Sbjct: 427 DFMVLDIP 434




37|Sequence|181|190|VVDMPPGTGD

>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 1 VVDMPPGTGD 10
++DMPPGTGD
Sbjct: 158 IIDMPPGTGD 167


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 1 VVDMPPGTGD 10
++D PPGTGD
Sbjct: 153 IIDFPPGTGD 162


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VVDMPPGTGD 10
++D PPGTGD
Sbjct: 153 IIDFPPGTGD 162


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVDMPPGTGD 10
++D PPGTGD
Sbjct: 153 IIDFPPGTGD 162


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VVDMPPGTGD 10
++D PPGTGD
Sbjct: 153 LIDTPPGTGD 162


>sp|Y130_ARCFU|PROBABLE deacetylase AF_0130|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VDMPPGTGD 10
+ +PPGTGD
Sbjct: 211 IPLPPGTGD 219


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 VVDMPPGTGD 10
++D PPG+GD
Sbjct: 154 LIDTPPGSGD 163


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVDMPPGTG 9
++D PPG G
Sbjct: 167 IIDGPPGVG 175


>sp|RL24E_SACS2|LARGE ribosomal subunit protein eL24|Saccharolobus solfataricus (strain

Query: 3 DMPPGTG 9
++PPGTG
Sbjct: 13 EIPPGTG 19


>sp|RL24E_SACI7|LARGE ribosomal subunit protein eL24|Saccharolobus islandicus (strain

Query: 3 DMPPGTG 9
++PPGTG
Sbjct: 13 EIPPGTG 19


>sp|RL24E_SACI6|LARGE ribosomal subunit protein eL24|Saccharolobus islandicus (strain

Query: 3 DMPPGTG 9
++PPGTG
Sbjct: 13 EIPPGTG 19


>sp|RL24E_SACI2|LARGE ribosomal subunit protein eL24|Saccharolobus islandicus (strain

Query: 3 DMPPGTG 9
++PPGTG
Sbjct: 13 EIPPGTG 19


>sp|RL24E_SACI1|LARGE ribosomal subunit protein eL24|Saccharolobus islandicus (strain

Query: 3 DMPPGTG 9
++PPGTG
Sbjct: 13 EIPPGTG 19


>sp|RL24E_SACI4|LARGE ribosomal subunit protein eL24|Saccharolobus islandicus (strain

Query: 3 DMPPGTG 9
++PPGTG
Sbjct: 13 EIPPGTG 19


>sp|RL24E_SACI3|LARGE ribosomal subunit protein eL24|Saccharolobus islandicus (strain

Query: 3 DMPPGTG 9
++PPGTG
Sbjct: 13 EIPPGTG 19


>sp|RL24E_METS5|LARGE ribosomal subunit protein eL24|Metallosphaera sedula (strain ATCC

Query: 3 DMPPGTG 9
D+PP TG
Sbjct: 13 DIPPATG 19


>sp|RL24E_PYRCJ|LARGE ribosomal subunit protein eL24|Pyrobaculum calidifontis (strain

Query: 3 DMPPGTG 9
D+PPG G
Sbjct: 12 DIPPGYG 18


>sp|RL24E_PYRAR|LARGE ribosomal subunit protein eL24|Pyrobaculum arsenaticum (strain

Query: 3 DMPPGTG 9
D+PPG G
Sbjct: 12 DIPPGYG 18


>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DMPPGTGD 10
++PP TGD
Sbjct: 264 NLPPVTGD 271


>sp|KCY_SULTO|CYTIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VVDMPPGTG 9
V+ PPG+G
Sbjct: 4 VISGPPGSG 12


>sp|KCY_IGNH4|CYTIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VVDMPPGTG 9
V+ PPG+G
Sbjct: 5 VISGPPGSG 13


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 VVDMPPGTGD 10
VVD+ PG G+
Sbjct: 567 VVDIGPGAGE 576


>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VVDMPPGTG 9
VVDMP G G
Sbjct: 276 VVDMPTGPG 284


>sp|EF1A_IGNH4|ELONGATION factor 1-alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VVDMPPGTG 9
VV MPPG G
Sbjct: 269 VVFMPPGVG 277


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 5 PPGTG 9
PPGTG
Sbjct: 208 PPGTG 212


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 5 PPGTG 9
PPGTG
Sbjct: 45 PPGTG 49


>sp|RFCS_SULTO|REPLICATION factor C small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 PPGTG 9
PPGTG
Sbjct: 48 PPGTG 52


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 5 PPGTG 9
PPGTG
Sbjct: 46 PPGTG 50


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 5 PPGTG 9
PPGTG
Sbjct: 52 PPGTG 56


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 5 PPGTG 9
PPGTG
Sbjct: 49 PPGTG 53


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 PPGTG 9
PPGTG
Sbjct: 45 PPGTG 49


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 PPGTG 9
PPGTG
Sbjct: 43 PPGTG 47


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PPGTG 9
PPGTG
Sbjct: 46 PPGTG 50


>sp|RFCS_AERPE|REPLICATION factor C small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 5 PPGTG 9
PPGTG
Sbjct: 48 PPGTG 52


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 5 PPGTG 9
PPGTG
Sbjct: 45 PPGTG 49


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 PPGTG 9
PPGTG
Sbjct: 45 PPGTG 49


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 PPGTG 9
PPGTG
Sbjct: 45 PPGTG 49


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 5 PPGTG 9
PPGTG
Sbjct: 45 PPGTG 49


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 PPGTG 9
PPGTG
Sbjct: 45 PPGTG 49


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 PPGTG 9
PPGTG
Sbjct: 76 PPGTG 80


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC

Query: 5 PPGTG 9
PPGTG
Sbjct: 60 PPGTG 64


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 5 PPGTG 9
PPGTG
Sbjct: 60 PPGTG 64


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 PPGTG 9
PPGTG
Sbjct: 45 PPGTG 49


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 5 PPGTG 9
PPGTG
Sbjct: 46 PPGTG 50


>sp|CDC6_PYRFU|ORC1-TYPE DNA replication protein|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DMPPGTGD 10
D+P TGD
Sbjct: 327 DLPANTGD 334


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VDMPPG 7
+D+PPG
Sbjct: 748 IDIPPG 753


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC

Query: 1 VVDMPPG 7
VVD PPG
Sbjct: 60 VVDKPPG 66


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PPGTG 9
PPGTG
Sbjct: 162 PPGTG 166


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 5 PPGTG 9
PPGTG
Sbjct: 49 PPGTG 53


>sp|KCY_SULAC|CYTIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VVDMPPGTG 9
++ PPG+G
Sbjct: 4 IISGPPGSG 12


>sp|KCY_SACS2|CYTIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VVDMPPGTG 9
++ PPG+G
Sbjct: 4 IISGPPGSG 12


>sp|KCY_SACI7|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VVDMPPGTG 9
++ PPG+G
Sbjct: 4 IISGPPGSG 12


>sp|KCY_SACI6|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VVDMPPGTG 9
++ PPG+G
Sbjct: 4 IISGPPGSG 12


>sp|KCY_SACI4|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VVDMPPGTG 9
++ PPG+G
Sbjct: 4 IISGPPGSG 12


>sp|KCY_SACI3|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VVDMPPGTG 9
++ PPG+G
Sbjct: 4 IISGPPGSG 12


>sp|KCY_SACI2|CYTIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VVDMPPGTG 9
++ PPG+G
Sbjct: 4 IISGPPGSG 12


>sp|KCY_SACI1|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VVDMPPGTG 9
++ PPG+G
Sbjct: 4 IISGPPGSG 12


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 5 PPGTG 9
PPGTG
Sbjct: 52 PPGTG 56


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 PPGTG 9
PPGTG
Sbjct: 195 PPGTG 199


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VDMPPG 7
+D+PPG
Sbjct: 750 IDIPPG 755


>sp|PRIS_THEVO|DNA primase small subunit PriS|Thermoplasma volcanium (strain ATCC

Query: 2 VDMPPG 7
+D+PPG
Sbjct: 307 IDLPPG 312


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC

Query: 5 PPGTG 9
PPGTG
Sbjct: 63 PPGTG 67


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 PPGTG 9
PPGTG
Sbjct: 195 PPGTG 199


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 PPGTG 9
PPGTG
Sbjct: 176 PPGTG 180


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 5 PPGTG 9
PPGTG
Sbjct: 221 PPGTG 225


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 PPGTG 9
PPGTG
Sbjct: 176 PPGTG 180


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 PPGTG 9
PPGTG
Sbjct: 176 PPGTG 180


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 PPGTG 9
PPGTG
Sbjct: 176 PPGTG 180


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 PPGTG 9
PPGTG
Sbjct: 176 PPGTG 180


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 PPGTG 9
PPGTG
Sbjct: 176 PPGTG 180


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 PPGTG 9
PPGTG
Sbjct: 193 PPGTG 197


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VVDMPPGTG 9
++D+P GTG
Sbjct: 4 ILDLPIGTG 12


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 PPGTG 9
PPGTG
Sbjct: 176 PPGTG 180


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 PPGTG 9
PPGTG
Sbjct: 176 PPGTG 180


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 5 PPGTG 9
PPGTG
Sbjct: 220 PPGTG 224


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 5 PPGTG 9
PPGTG
Sbjct: 364 PPGTG 368


>sp|PURE_PYRAB|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide mutase|Pyrococcus abyssi (strain GE5 /

Query: 1 VVDMPPG 7
+V MPPG
Sbjct: 106 IVQMPPG 112


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 PPGTG 9
PPGTG
Sbjct: 195 PPGTG 199


>sp|CDC66_HALSA|ORC1-TYPE DNA replication protein 6|Halobacterium salinarum (strain ATCC

Query: 5 PPGTG 9
PPGTG
Sbjct: 63 PPGTG 67


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 5 PPGTG 9
PPGTG
Sbjct: 221 PPGTG 225


Query: 5 PPGTG 9
PPGTG
Sbjct: 494 PPGTG 498


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 5 PPGTG 9
PPGTG
Sbjct: 190 PPGTG 194


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PPGTG 9
PPGTG
Sbjct: 212 PPGTG 216


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 5 PPGTG 9
PPGTG
Sbjct: 190 PPGTG 194


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 5 PPGTG 9
PPGTG
Sbjct: 190 PPGTG 194


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PPGTG 9
PPGTG
Sbjct: 183 PPGTG 187


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 5 PPGTG 9
PPGTG
Sbjct: 192 PPGTG 196


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 5 PPGTG 9
PPGTG
Sbjct: 190 PPGTG 194


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 5 PPGTG 9
PPGTG
Sbjct: 201 PPGTG 205


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 1 VVDMPPGTG 9
VV +PPG G
Sbjct: 313 VVILPPGCG 321


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 5 PPGTG 9
PPGTG
Sbjct: 190 PPGTG 194


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 PPGTG 9
PPGTG
Sbjct: 389 PPGTG 393


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 PPGTG 9
PPGTG
Sbjct: 254 PPGTG 258


Query: 5 PPGTG 9
PPGTG
Sbjct: 529 PPGTG 533


>sp|GPMI_HALSA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Halobacterium salinarum (strain ATCC 700922

Query: 2 VDMPPGTGD 10
V +PP +GD
Sbjct: 464 VSLPPASGD 472


>sp|AMPPA_HYPBU|AMP phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 1 VVDMPPGTG 9
V+D+P G G
Sbjct: 279 VIDLPTGRG 287


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 PPGTG 9
PPGTG
Sbjct: 232 PPGTG 236


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PPGTG 9
PPGTG
Sbjct: 224 PPGTG 228


Query: 5 PPGTG 9
PPGTG
Sbjct: 497 PPGTG 501


>sp|PURE_METSM|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanobrevibacter

Query: 2 VDMPPG 7
V+MPPG
Sbjct: 291 VNMPPG 296


>sp|AROC_AERPE|CHORISMATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 DMPPGTGD 10
++PPG GD
Sbjct: 219 NVPPGLGD 226


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 5 PPGTG 9
PPGTG
Sbjct: 190 PPGTG 194


>sp|SRP54_HALSA|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 1 VVDMPPGTG 9
V+DM PG G
Sbjct: 346 VMDMIPGMG 354


>sp|SRP54_HALS3|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 1 VVDMPPGTG 9
V+DM PG G
Sbjct: 346 VMDMIPGMG 354


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 5 PPGTG 9
PPGTG
Sbjct: 194 PPGTG 198


>sp|SRP54_NATPD|SIGNAL recognition particle 54 kDa|Natronomonas pharaonis (strain ATCC

Query: 1 VVDMPPGTG 9
V+DM PG G
Sbjct: 345 VMDMIPGLG 353




38|Sequence|186|195|PGTGDVQLSV

>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 1 PGTGDVQLSV 10
PGTGD LS+
Sbjct: 163 PGTGDEALSI 172


>sp|Y535_METJA|UNCHARACTERIZED protein MJ0535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGTGDV 6
PGTGD+
Sbjct: 194 PGTGDI 199


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 PGTGDVQLS 9
PG+GD+Q++
Sbjct: 159 PGSGDIQIT 167


>sp|RIFK_METAC|RIBOFLAVIN kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PGTGDVQLS 9
PGT +VQLS
Sbjct: 138 PGTLNVQLS 146


>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 2 GTGDVQL 8
GTGDV+L
Sbjct: 366 GTGDVEL 372


>sp|RIFK_METMA|RIBOFLAVIN kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGTGDVQLS 9
PGT +VQLS
Sbjct: 126 PGTLNVQLS 134


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PGTGDVQLSV 10
PG G+V +S+
Sbjct: 61 PGVGEVPISI 70


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PGTGDVQLSV 10
PG GDV +
Sbjct: 327 PGHGDVDFEI 336


>sp|PDXS_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Metallosphaera sedula (strain

Query: 1 PGTGDVQLSV 10
PGTG+V +V
Sbjct: 193 PGTGNVSEAV 202


>sp|RFRNP_METTH|RNA-FREE ribonuclease P|Methanothermobacter thermautotrophicus (strain

Query: 2 GTGDVQLSV 10
G GD+ LSV
Sbjct: 24 GDGDLNLSV 32


>sp|PDXS_DESA1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Desulfurococcus amylolyticus

Query: 1 PGTGDVQLSV 10
PGTG+V +V
Sbjct: 187 PGTGNVAEAV 196


>sp|MUTL_HALSA|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 2 GTGDVQ 7
GTGDVQ
Sbjct: 203 GTGDVQ 208


>sp|MUTL_HALS3|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 2 GTGDVQ 7
GTGDVQ
Sbjct: 203 GTGDVQ 208


>sp|MTRD_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina barkeri (strain

Query: 2 GTGDVQLS 9
GTG VQL+
Sbjct: 45 GTGTVQLA 52


>sp|MTRD_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 2 GTGDVQLS 9
GTG VQL+
Sbjct: 45 GTGTVQLA 52


>sp|MTRD_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina acetivorans (strain

Query: 2 GTGDVQLS 9
GTG VQL+
Sbjct: 45 GTGTVQLA 52




39|Sequence|191|200|VQLSVSQNIP

>sp|K6PF_THEKO|ADP-SPECIFIC phosphofructokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QLSVSQNIP 10
Q+SV N+P
Sbjct: 388 QISVGMNVP 396


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VQLSVSQNI 9
V +SVS+NI
Sbjct: 82 VSISVSENI 90




40|Sequence|196|205|SQNIPITGAV

>sp|CAS4_HALVD|CRISPR-ASSOCIATED exonuclease Cas4|Haloferax volcanii (strain ATCC 29605

Query: 1 SQNIPITG 8
S N+PITG
Sbjct: 20 SPNVPITG 27


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QNIPITGAV 10
+N+P+TG +
Sbjct: 239 RNVPVTGVI 247




41|Sequence|201|210|ITGAVIVSTP

>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ITGAVIVSTP 10
I GA+IV+TP
Sbjct: 174 IDGAIIVTTP 183


>sp|M556_METJA|METHYLATED protein MJ0556|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ITGAVIVSTP 10
I+G VI++TP
Sbjct: 29 ISGDVIITTP 38


>sp|RS8_METTH|SMALL ribosomal subunit protein uS8|Methanothermobacter

Query: 3 GAVIVSTP 10
G +IVSTP
Sbjct: 100 GIIIVSTP 107


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TGAVIVST 9
TGAV++ST
Sbjct: 279 TGAVMIST 286


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TGAVIVST 9
TGAV++ST
Sbjct: 297 TGAVMIST 304


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TGAVIVST 9
TGAV++ST
Sbjct: 305 TGAVMIST 312


>sp|RS8_DESA1|SMALL ribosomal subunit protein uS8|Desulfurococcus amylolyticus (strain

Query: 3 GAVIVSTP 10
G +IVSTP
Sbjct: 103 GVIIVSTP 110


>sp|TRM1_PYRAE|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum aerophilum

Query: 3 GAVIVSTP 10
G+VIV TP
Sbjct: 174 GSVIVKTP 181


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 ITGAVIVSTP 10
I G VIV+TP
Sbjct: 175 IDGVVIVTTP 184


>sp|RS8_METS5|SMALL ribosomal subunit protein uS8|Metallosphaera sedula (strain ATCC

Query: 3 GAVIVSTP 10
G +IVSTP
Sbjct: 103 GVIIVSTP 110


>sp|PELO_METPE|PROTEIN pelota homolog|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 ITGAVIVSTP 10
ITG VI++ P
Sbjct: 186 ITGPVIIAGP 195


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 3 GAVIVST 9
GAVIVST
Sbjct: 320 GAVIVST 326


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ITGAVIVST 9
I GAVIVS+
Sbjct: 306 IKGAVIVSS 314


>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 1 ITGAVIVSTP 10
ITG VIV+ P
Sbjct: 179 ITGFVIVTIP 188


>sp|THS2_HALVD|CHAPERONIN subunit CTT2|Haloferax volcanii (strain ATCC 29605

Query: 1 ITGAVIVS 8
ITGA +VS
Sbjct: 330 ITGAAVVS 337


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 3 GAVIVST 9
GA+IVST
Sbjct: 320 GAIIVST 326




42|Sequence|206|215|IVSTPQDIAL

>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 1 IVSTPQDIAL 10
IV+TPQ++AL
Sbjct: 178 IVTTPQEVAL 187


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IVSTPQDIAL 10
IV+TPQ++AL
Sbjct: 178 IVTTPQEVAL 187


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IVSTPQDIAL 10
+V+TPQ++AL
Sbjct: 178 VVTTPQEVAL 187


>sp|RL30_PYRAE|LARGE ribosomal subunit protein uL30|Pyrobaculum aerophilum (strain

Query: 1 IVSTPQDIAL 10
I +TP+DIA+
Sbjct: 21 IPTTPRDIAV 30


>sp|RL30_PYRAR|LARGE ribosomal subunit protein uL30|Pyrobaculum arsenaticum (strain

Query: 1 IVSTPQDIA 9
I +TP+DIA
Sbjct: 20 IPTTPRDIA 28


>sp|RADA_SULAC|DNA repair and recombination protein|Sulfolobus acidocaldarius

Query: 2 VSTPQDIAL 10
V+TPQD+++
Sbjct: 38 VATPQDLSV 46


>sp|RL30_PYRNV|LARGE ribosomal subunit protein uL30|Pyrobaculum neutrophilum (strain

Query: 1 IVSTPQDIA 9
I +TP+DIA
Sbjct: 18 IPTTPRDIA 26


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VSTPQDI 8
V TPQD+
Sbjct: 372 VKTPQDV 378


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VSTPQDI 8
V TPQD+
Sbjct: 357 VKTPQDV 363


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VSTPQDI 8
V TPQD+
Sbjct: 357 VKTPQDV 363


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 VSTPQDI 8
V TPQD+
Sbjct: 357 VKTPQDV 363


>sp|RL30_PYRIL|LARGE ribosomal subunit protein uL30|Pyrobaculum islandicum (strain DSM

Query: 1 IVSTPQDIA 9
I +TP+DIA
Sbjct: 21 IPTTPRDIA 29


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VSTPQDI 8
V TPQD+
Sbjct: 357 VKTPQDV 363


>sp|PGK_METKA|PHOSPHOGLYCERATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 IVSTPQDIAL 10
++ P+D+AL
Sbjct: 271 VILVPEDVAL 280


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VSTPQD 7
+STPQD
Sbjct: 637 ISTPQD 642




43|Sequence|211|220|QDIALMDAHK

>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IALMDAH 9
IA+MDAH
Sbjct: 205 IAVMDAH 211


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 QDIALMDAH 9
QD+A++D H
Sbjct: 605 QDLAMVDDH 613


>sp|OGG1_ARCFU|8-OXOGUANINE DNA glycosylase/AP lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QDIALMDAH 9
+D+A++D H
Sbjct: 134 EDVAIIDRH 142




44|Sequence|216|225|MDAHKGAEMF

>sp|PYRF_METTH|OROTIDINE 5'-phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 3 AHKGAEMF 10
+H GAEMF
Sbjct: 127 SHPGAEMF 134


>sp|Y273_HALLT|PUTATIVE HTH-type transcriptional regulatory protein|Halorubrum

Query: 1 MDAHKGAEM 9
+DA GAEM
Sbjct: 54 LDAETGAEM 62


>sp|GLFT_THEAC|GLUTAMATE formimidoyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 MDAHKG 6
MDAH+G
Sbjct: 74 MDAHRG 79


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 3 AHKGAEMF 10
+HK AEM+
Sbjct: 2 SHKSAEMY 9


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 3 AHKGAEMF 10
+HK AEM+
Sbjct: 2 SHKSAEMY 9


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain

Query: 3 AHKGAEMF 10
+HK AEM+
Sbjct: 2 SHKSAEMY 9


>sp|NUSA_THEAC|PROBABLE transcription termination protein NusA|Thermoplasma acidophilum

Query: 4 HKGAEMF 10
HK AEMF
Sbjct: 44 HKMAEMF 50


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 MDAHKGAEMF 10
+DAHKG F
Sbjct: 973 VDAHKGEIWF 982


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 MDAHKGAE 8
+ +HKGAE
Sbjct: 238 ISSHKGAE 245


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 1 MDAHKGAE 8
+ +HKGAE
Sbjct: 218 ISSHKGAE 225




45|Sequence|221|230|GAEMFRRVHV

>sp|GATA_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanothermobacter thermautotrophicus

Query: 1 GAEMFRRVHV 10
G+E+ RR+H+
Sbjct: 332 GSEVLRRIHM 341


>sp|RACD_PYRHO|ASPARTATE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AEMFRRV 8
AE+FRR+
Sbjct: 16 AELFRRI 22


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 1 GAEMFRRVH 9
GAE+FR H
Sbjct: 487 GAEIFRVQH 495


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GAEMFRRVH 9
G+E +RVH
Sbjct: 561 GSEYLKRVH 569


>sp|GATA_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 1 GAEMFRRVHV 10
GAE+ RR+ +
Sbjct: 333 GAEVARRIEI 342


>sp|TRPA_METTH|TRYPTOPHAN synthase alpha chain|Methanothermobacter thermautotrophicus

Query: 2 AEMFRRVH 9
AEMFRR
Sbjct: 10 AEMFRRAD 17


>sp|AROB_THEAC|3-DEHYDROQUINATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GAEMFRRV 8
G +MFR+V
Sbjct: 191 GGDMFRKV 198


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain

Query: 2 AEMFRRVH 9
AE+FR+ H
Sbjct: 25 AELFRKQH 32


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GAEMFRRVH 9
G+E +RVH
Sbjct: 561 GSEYLKRVH 569


>sp|RS19E_ARCFU|SMALL ribosomal subunit protein eS19|Archaeoglobus fulgidus (strain

Query: 2 AEMFRRVHV 10
A +FRRV++
Sbjct: 54 ASIFRRVYI 62




46|Sequence|226|235|RRVHVPVLGL

>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 3 VHVPVLGL 10
VHVPV+G+
Sbjct: 462 VHVPVVGI 469


>sp|SRP54_METJA|SIGNAL recognition particle 54 kDa|Methanocaldococcus jannaschii (strain

Query: 2 RVHVPVLG 9
++HVP+ G
Sbjct: 153 KIHVPIYG 160


>sp|SIHH_METKA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 2 RVHVPVLG 9
R H+PVLG
Sbjct: 28 RDHMPVLG 35


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RVHVPVLGL 10
R+H P+L L
Sbjct: 25 RLHSPILSL 33


>sp|GUAAA_METMA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina mazei

Query: 1 RRVHVPVLGL 10
R + VP+LG+
Sbjct: 69 REIDVPILGI 78


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 HVPVLGL 10
H+P LGL
Sbjct: 294 HLPTLGL 300


>sp|THIE_METAR|THIAMINE-PHOSPHATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 RRVHVPVLGL 10
RRV +PV+ +
Sbjct: 152 RRVSIPVVAI 161


>sp|GUAAA_METAC|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina

Query: 1 RRVHVPVLGL 10
R + +P+LG+
Sbjct: 69 REIDIPILGI 78




47|Sequence|231|240|PVLGLVQNMS

>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PVLGLVQNMS 10
P++G+++NMS
Sbjct: 204 PIIGIIENMS 213


>sp|RNZ_THEAC|RIBONUCLEASE Z|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VLGLVQNMS 10
+LGLVQ+MS
Sbjct: 73 LLGLVQSMS 81


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 PVLGLVQNM 9
P++G+V+NM
Sbjct: 205 PIIGIVENM 213


>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 2 VLGLVQNMS 10
+LG+V+NMS
Sbjct: 210 ILGVVENMS 218


>sp|RNZ_THEVO|RIBONUCLEASE Z|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VLGLVQNMS 10
++GLVQ+MS
Sbjct: 73 LIGLVQSMS 81




48|Sequence|236|245|VQNMSVFQCP

>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 1 VQNMSVFQCP 10
V+NMS F CP
Sbjct: 214 VENMSHFVCP 223


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VQNMSVFQCP 10
++NMS F CP
Sbjct: 209 IENMSGFVCP 218


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VQNMSVFQCP 10
V+NMS CP
Sbjct: 208 VENMSYLICP 217


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 1 VQNMSVFQCP 10
V+NMS CP
Sbjct: 208 VENMSYLICP 217


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 VQNMSVFQCP 10
V+NM F CP
Sbjct: 210 VENMGGFVCP 219


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VQNMSVFQCP 10
++NMS CP
Sbjct: 208 IENMSYLICP 217




49|Sequence|241|250|VFQCPKCKHK

>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 VFQCPKCKH 9
+F+CPKC H
Sbjct: 700 LFKCPKCGH 708


Query: 2 FQCPKCKHK 10
+ CPKC K
Sbjct: 745 YTCPKCNVK 753


Query: 2 FQCPKCKHK 10
F+C KC K
Sbjct: 1284 FRCVKCNTK 1292


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 FQCPKCKH 9
F+CPKC H
Sbjct: 713 FKCPKCGH 720


Query: 2 FQCPKC 7
++CPKC
Sbjct: 757 YRCPKC 762


Query: 3 QCPKCKHK 10
+CPKC K
Sbjct: 1620 KCPKCGGK 1627


Query: 1 VFQCPKC 7
++ CPKC
Sbjct: 737 LWHCPKC 743


Query: 2 FQCPKCKHK 10
F+C KC K
Sbjct: 1603 FRCVKCNTK 1611


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FQCPKCKH 9
F+CPKC H
Sbjct: 702 FKCPKCGH 709


Query: 2 FQCPKCKHK 10
+ CPKC K
Sbjct: 746 YSCPKCNVK 754


Query: 1 VFQCPKC 7
++ CPKC
Sbjct: 726 IWTCPKC 732


Query: 2 FQCPKCKHK 10
F+C KC K
Sbjct: 1119 FRCVKCNTK 1127


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 FQCPKCKH 9
F+CPKC H
Sbjct: 704 FKCPKCGH 711


Query: 2 FQCPKCKHK 10
+ CPKC K
Sbjct: 748 YTCPKCNVK 756


Query: 2 FQCPKCKHK 10
F+C KC K
Sbjct: 1306 FRCVKCNTK 1314


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 FQCPKCK 8
F+CPKCK
Sbjct: 1058 FRCPKCK 1064


Query: 1 VFQCPKCKH 9
V++CP C
Sbjct: 666 VYRCPHCNQ 674


Query: 3 QCPKC 7
+CPKC
Sbjct: 643 RCPKC 647


Query: 4 CPKC 7
CPKC
Sbjct: 683 CPKC 686


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 VFQCPKC 7
VF+CP+C
Sbjct: 649 VFRCPRC 655


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 1 VFQCPKCKHK 10
+ QCPKC ++
Sbjct: 234 IHQCPKCPYR 243


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 1 VFQCPKCKHK 10
V QCPKC ++
Sbjct: 234 VMQCPKCLYR 243


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 2 FQCPKCKHK 10
F+CPKC +
Sbjct: 382 FRCPKCGRR 390


>sp|TFE_METS5|TRANSCRIPTION factor E|Metallosphaera sedula (strain ATCC 51363

Query: 2 FQCPKC 7
F+CPKC
Sbjct: 135 FKCPKC 140


>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 2 FQCPKCKHK 10
++CPKC ++
Sbjct: 244 YECPKCGYR 252


>sp|TFE_SULTO|TRANSCRIPTION factor E|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FQCPKC 7
F+CPKC
Sbjct: 135 FKCPKC 140


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 2 FQCPKCKHK 10
++CPKC ++
Sbjct: 382 YKCPKCGYR 390


Query: 4 CPKC 7
CPKC
Sbjct: 366 CPKC 369


>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 1 VFQCPKC 7
VF+CP C
Sbjct: 326 VFKCPSC 332


>sp|TFE_META3|TRANSCRIPTION factor E|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FQCPKCKHK 10
F CP+C+ K
Sbjct: 115 FYCPRCEFK 123


>sp|TFE_METKA|TRANSCRIPTION factor E|Methanopyrus kandleri (strain AV19 /

Query: 2 FQCPKC 7
F+CPKC
Sbjct: 145 FRCPKC 150


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VFQCPKCK 8
V+ CPKC+
Sbjct: 168 VYWCPKCR 175


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VFQCPKCK 8
V+ CPKC+
Sbjct: 168 VYWCPKCR 175


>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 1 VFQCPKCKHK 10
V QCP C ++
Sbjct: 234 VMQCPNCLYR 243


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 1 VFQCPKCKHK 10
+ QCP C ++
Sbjct: 234 ILQCPTCAYR 243


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VFQCPKCK 8
V+ CPKC+
Sbjct: 186 VYWCPKCE 193


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VFQCPKCK 8
V+ CPKC+
Sbjct: 203 VYWCPKCE 210


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 2 FQCPKCKHK 10
++CPKC ++
Sbjct: 389 YKCPKCGYR 397


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 QCPKC 7
QCPKC
Sbjct: 708 QCPKC 712


>sp|HYPA_METS3|HYDROGENASE maturation factor HypA|Methanobrevibacter smithii (strain ATCC

Query: 1 VFQCPKCKHK 10
+ +CPKC +K
Sbjct: 93 IVECPKCGNK 102


>sp|TFE_NANEQ|TRANSCRIPTION factor E|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VFQCPKCKHK 10
+F CPKC K
Sbjct: 106 LFICPKCGRK 115


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 3 QCPKCKHK 10
+CPKC K
Sbjct: 689 KCPKCNSK 696


Query: 4 CPKC 7
CPKC
Sbjct: 1080 CPKC 1083


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VFQCPKCK 8
V+ CP+C+
Sbjct: 168 VYWCPRCR 175


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 2 FQCPKCKHK 10
F+CP+C ++
Sbjct: 136 FECPECGNQ 144


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 3 QCPKC 7
QCPKC
Sbjct: 360 QCPKC 364


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 3 QCPKCK 8
+CPKCK
Sbjct: 356 KCPKCK 361


>sp|TFE_THEKO|TRANSCRIPTION factor E|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FQCPKC 7
FQCP C
Sbjct: 135 FQCPIC 140


>sp|TFE_NATPD|TRANSCRIPTION factor E|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FQCPKC 7
F+CP+C
Sbjct: 136 FECPEC 141


>sp|TFE_HALSA|TRANSCRIPTION factor E|Halobacterium salinarum (strain ATCC 700922

Query: 2 FQCPKC 7
F+CP+C
Sbjct: 136 FECPEC 141


>sp|TFE_METMJ|TRANSCRIPTION factor E|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FQCPKCK 8
F+CP C+
Sbjct: 138 FECPNCE 144


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 FQCPKC 7
++CPKC
Sbjct: 322 YRCPKC 327


>sp|TFE_PYRFU|TRANSCRIPTION factor E|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FQCPKC 7
FQCP C
Sbjct: 136 FQCPIC 141


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VFQCPKCK 8
+ QCP+C+
Sbjct: 181 ISQCPRCE 188


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VFQCPKCK 8
+ QCP+C+
Sbjct: 181 ISQCPRCE 188


>sp|RL37A_HALSA|LARGE ribosomal subunit protein eL43|Halobacterium salinarum (strain

Query: 1 VFQCPKCKHK 10
++QC KC +K
Sbjct: 53 IWQCGKCGYK 62


>sp|RL37A_HALS3|LARGE ribosomal subunit protein eL43|Halobacterium salinarum (strain

Query: 1 VFQCPKCKHK 10
++QC KC +K
Sbjct: 53 IWQCGKCGYK 62


>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 1 VFQCPKC 7
+ +CPKC
Sbjct: 55 IMKCPKC 61


>sp|TFE_METMP|TRANSCRIPTION factor E|Methanococcus maripaludis (strain DSM 14266

Query: 2 FQCPKC 7
F+CP+C
Sbjct: 134 FRCPQC 139


>sp|TFE_METM7|TRANSCRIPTION factor E|Methanococcus maripaludis (strain C7 /

Query: 2 FQCPKC 7
F+CP+C
Sbjct: 134 FRCPQC 139


>sp|TFE_METM5|TRANSCRIPTION factor E|Methanococcus maripaludis (strain C5 /

Query: 2 FQCPKC 7
F+CP+C
Sbjct: 134 FRCPQC 139


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 QCPKCK 8
QCP+C+
Sbjct: 183 QCPRCE 188


>sp|RL37A_PYRIL|LARGE ribosomal subunit protein eL43|Pyrobaculum islandicum (strain DSM

Query: 1 VFQCPKC 7
++QCPKC
Sbjct: 56 IWQCPKC 62


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VFQCPKCK 8
V+ CP+C+
Sbjct: 168 VYWCPRCR 175


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CPKCK 8
CPKCK
Sbjct: 57 CPKCK 61


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 CPKCK 8
CPKCK
Sbjct: 128 CPKCK 132


>sp|TFE_METVS|TRANSCRIPTION factor E|Methanococcus vannielii (strain ATCC 35089

Query: 2 FQCPKC 7
F+CP+C
Sbjct: 134 FRCPQC 139


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 4 CPKCKHK 10
CP C H+
Sbjct: 385 CPACPHR 391


>sp|TIAS_ARCFU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Archaeoglobus fulgidus (strain

Query: 2 FQCPKCKHK 10
F+C KC+ K
Sbjct: 368 FRCKKCRTK 376


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VFQCPKCK 8
V+ CP+C+
Sbjct: 178 VYWCPRCE 185


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 4 CPKCKHK 10
CP C H+
Sbjct: 385 CPACPHR 391


>sp|Y4320_HALS3|UPF0148 protein OE_4320R|Halobacterium salinarum (strain ATCC 29341

Query: 4 CPKCKH 9
CP C+H
Sbjct: 65 CPTCQH 70


>sp|Y2366_HALSA|UPF0148 protein VNG_2366C|Halobacterium salinarum (strain ATCC 700922

Query: 4 CPKCKH 9
CP C+H
Sbjct: 65 CPTCQH 70


>sp|TFE_ARCFU|TRANSCRIPTION factor E|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FQCPKC 7
F CP+C
Sbjct: 137 FTCPRC 142


>sp|TFE_AERPE|TRANSCRIPTION factor E|Aeropyrum pernix (strain ATCC 700893

Query: 2 FQCPKC 7
F CP+C
Sbjct: 147 FTCPRC 152


Query: 2 FQCPKCKHK 10
+ CP+C K
Sbjct: 128 YTCPRCGSK 136


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 QCPKCK 8
QCP CK
Sbjct: 16 QCPLCK 21


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 QCPKCK 8
QCP CK
Sbjct: 16 QCPLCK 21


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 QCPKCK 8
QCP CK
Sbjct: 21 QCPLCK 26


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 QCPKCK 8
QCP CK
Sbjct: 16 QCPLCK 21


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 QCPKCK 8
QCP CK
Sbjct: 16 QCPLCK 21


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 4 CPKCKHK 10
CP C H+
Sbjct: 385 CPACPHR 391


>sp|TFE_CALMQ|TRANSCRIPTION factor E|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VFQCPKC 7
++ CPKC
Sbjct: 123 IYICPKC 129


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 4 CPKCKHK 10
CPKC K
Sbjct: 692 CPKCGRK 698


Query: 2 FQCPKCK 8
CP+CK
Sbjct: 677 LSCPRCK 683


Query: 4 CPKC 7
CPKC
Sbjct: 1082 CPKC 1085


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 4 CPKCKHK 10
CPKC K
Sbjct: 686 CPKCGRK 692


Query: 4 CPKCK 8
CP+CK
Sbjct: 673 CPRCK 677


Query: 4 CPKC 7
CPKC
Sbjct: 1076 CPKC 1079


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 4 CPKCKHK 10
CPKC K
Sbjct: 685 CPKCGRK 691


Query: 2 FQCPKCK 8
CP+CK
Sbjct: 670 LSCPRCK 676


Query: 4 CPKC 7
CPKC
Sbjct: 1075 CPKC 1078


>sp|TFE_METLZ|TRANSCRIPTION factor E|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 FQCPKC 7
F CP+C
Sbjct: 176 FSCPQC 181


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 VFQCPKCKHK 10
++ CP C+ K
Sbjct: 673 LYYCPSCRMK 682


>sp|TFE_METTH|TRANSCRIPTION factor E|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 FQCPKCKHK 10
F CP+C K
Sbjct: 135 FTCPECGSK 143


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 4 CPKCKHK 10
CP C H+
Sbjct: 372 CPGCPHR 378


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 4 CPKCKHK 10
CP C H+
Sbjct: 372 CPGCPHR 378


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 1 VFQCPKC 7
+ +CPKC
Sbjct: 348 LLKCPKC 354


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VFQCPKCK 8
V CPKC+
Sbjct: 212 VIWCPKCE 219


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VFQCPKCKH 9
V CP+C H
Sbjct: 473 VDSCPECGH 481


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 CPKCK 8
CPKCK
Sbjct: 128 CPKCK 132


>sp|RL37A_PICTO|LARGE ribosomal subunit protein eL43|Picrophilus torridus (strain ATCC

Query: 2 FQCPKCKHK 10
+ CPKCK K
Sbjct: 37 YVCPKCKQK 45


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VFQCPKC 7
VF+C KC
Sbjct: 1160 VFRCTKC 1166


Query: 3 QCPKC 7
+CPKC
Sbjct: 1178 KCPKC 1182


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VFQCPKC 7
V +CPKC
Sbjct: 463 VDECPKC 469


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FQCPKC 7
F+CP C
Sbjct: 499 FKCPTC 504


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 CPKCK 8
CP+CK
Sbjct: 186 CPRCK 190


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FQCPKCK 8
F CP CK
Sbjct: 124 FYCPNCK 130


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VFQCPKC 7
+F CP C
Sbjct: 13 LFSCPNC 19


>sp|TF2B_METPE|TRANSCRIPTION initiation factor IIB|Methanosphaerula palustris (strain ATCC

Query: 4 CPKCKHK 10
CP+CK +
Sbjct: 38 CPECKSR 44


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QCPKC-KH 9
+CPKC KH
Sbjct: 22 RCPKCGKH 29


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VFQCPKC 7
V +CPKC
Sbjct: 975 VGKCPKC 981


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VFQCPKC 7
V+ CPKC
Sbjct: 409 VWYCPKC 415


>sp|AMZA_THEKO|ARCHAEMETZINCIN kodakarensis (strain ATCC BAA-918

Query: 2 FQCPKCKHK 10
+ CP C+ K
Sbjct: 169 YYCPNCERK 177


>sp|TFE_IGNH4|TRANSCRIPTION factor E|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 FQCPKC 7
F CP+C
Sbjct: 134 FTCPRC 139


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 VFQCPKC 7
+ +CPKC
Sbjct: 356 ITKCPKC 362


>sp|TF2B3_HALSA|TRANSCRIPTION initiation factor IIB 3|Halobacterium salinarum (strain ATCC

Query: 3 QCPKC 7
QCP+C
Sbjct: 24 QCPEC 28


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 2 FQCPKC 7
++CP+C
Sbjct: 374 YRCPRC 379


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FQCPKC 7
+ CPKC
Sbjct: 207 YYCPKC 212


>sp|TFE_CENSY|TRANSCRIPTION factor E|Cenarchaeum symbiosum (strain A)

Query: 1 VFQCPKC 7
+F+CP C
Sbjct: 134 MFKCPSC 140


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QCPKC 7
QCP+C
Sbjct: 152 QCPRC 156


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 QCPKC 7
+CPKC
Sbjct: 127 KCPKC 131


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 QCPKC 7
+CPKC
Sbjct: 127 KCPKC 131


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 QCPKC 7
+CPKC
Sbjct: 127 KCPKC 131


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 QCPKC 7
+CPKC
Sbjct: 127 KCPKC 131


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 QCPKC 7
+CPKC
Sbjct: 19 KCPKC 23


>sp|NPD_THEKO|NAD-DEPENDENT protein deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 QCPKC 7
+CPKC
Sbjct: 150 KCPKC 154


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 3 QCPKC 7
+CPKC
Sbjct: 77 KCPKC 81


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain

Query: 3 QCPKC 7
+CPKC
Sbjct: 89 KCPKC 93


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FQCPKCKHK 10
F+C KC K
Sbjct: 1000 FRCTKCNAK 1008


Query: 4 CPKC 7
CPKC
Sbjct: 635 CPKC 638


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 FQCPKCKHK 10
F+C KC K
Sbjct: 995 FRCTKCNAK 1003


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC 700027

Query: 2 FQCPKCKHK 10
F+C KC K
Sbjct: 993 FRCTKCNAK 1001


Query: 3 QCPKC 7
+CPKC
Sbjct: 627 RCPKC 631


>sp|TFS_METTH|TRANSCRIPTION factor S|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 FQCPKCKH 9
F+C +CKH
Sbjct: 91 FRCTRCKH 98


>sp|Y748_METKA|UPF0212 protein MK0748|Methanopyrus kandleri (strain AV19 /

Query: 2 FQCPKC 7
++CP+C
Sbjct: 55 YECPEC 60


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 4 CPKCKH 9
CPKC++
Sbjct: 192 CPKCEN 197


>sp|HYPA_PYRAB|HYDROGENASE maturation factor HypA|Pyrococcus abyssi (strain GE5 /

Query: 1 VFQCPKCKHK 10
VF+C C H+
Sbjct: 70 VFRCRNCGHE 79


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 1 VFQCPKCKHK 10
+ CP C H+
Sbjct: 242 IAHCPNCLHR 251


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 QCPKC 7
+CPKC
Sbjct: 127 RCPKC 131


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QCPKC 7
+CPKC
Sbjct: 129 RCPKC 133


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 QCPKC 7
+CPKC
Sbjct: 18 RCPKC 22


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 QCPKC 7
+CPKC
Sbjct: 355 RCPKC 359


>sp|NPD_PYRFU|NAD-DEPENDENT protein deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 QCPKC 7
+CPKC
Sbjct: 149 RCPKC 153


>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 QCPKC 7
+CPKC
Sbjct: 155 RCPKC 159


>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 QCPKC 7
+CPKC
Sbjct: 153 RCPKC 157


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19

Query: 1 VFQCPKCK 8
V +CP+C+
Sbjct: 15 VGECPECR 22


>sp|NPD_PYRHO|NAD-DEPENDENT protein deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 QCPKC 7
+CPKC
Sbjct: 149 KCPKC 153


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 CPKCKH 9
CPKC++
Sbjct: 192 CPKCEN 197


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 4 CPKCKH 9
CPKC++
Sbjct: 192 CPKCEN 197


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM 22066

Query: 2 FQCPKCK 8
+ CP CK
Sbjct: 293 YTCPGCK 299


>sp|HYPA_THEON|HYDROGENASE maturation factor HypA|Thermococcus onnurineus (strain NA1)

Query: 1 VFQCPKCKHK 10
VF+C C H+
Sbjct: 70 VFKCRDCGHE 79


Query: 4 CPKC 7
CPKC
Sbjct: 110 CPKC 113


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 2 FQCPKC 7
F CP C
Sbjct: 138 FTCPNC 143


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 4 CPKCKHK 10
CPKC HK
Sbjct: 678 CPKC-HK 683


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 QCPKCKH 9
+CP C H
Sbjct: 23 RCPYCGH 29


>sp|TFE_HYPBU|TRANSCRIPTION factor E|Hyperthermus butylicus (strain DSM 5456

Query: 2 FQCPKC 7
F CP+C
Sbjct: 134 FICPRC 139


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 CPKCKH 9
CPKC++
Sbjct: 189 CPKCEN 194


>sp|TF2B_PYRIL|TRANSCRIPTION initiation factor IIB|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VFQCPKC 7
V++CP C
Sbjct: 34 VYRCPIC 40


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 VFQCPKCKHK 10
++ CP C +
Sbjct: 234 LYHCPSCPER 243


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 2 FQCPKCKHK 10
F+C +C H+
Sbjct: 71 FKCAECGHR 79


Query: 2 FQCPKC 7
+CPKC
Sbjct: 107 LKCPKC 112


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VFQCPKC 7
V++CP C
Sbjct: 34 VYRCPIC 40


>sp|SCAF_METJA|DUF35 domain-containing scaffold protein|Methanocaldococcus jannaschii

Query: 4 CPKCKHK 10
CPKC+ K
Sbjct: 44 CPKCRRK 50


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VFQCPKCKHK 10
++ CP C+ +
Sbjct: 528 LYLCPNCRKR 537


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 3 QCPKC 7
CPKC
Sbjct: 355 HCPKC 359


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 QCPKC 7
CPKC
Sbjct: 355 HCPKC 359


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 3 QCPKC 7
+CPKC
Sbjct: 1070 KCPKC 1074


>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VFQCPKC 7
V++CP C
Sbjct: 34 VYKCPIC 40


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 4 CPKCKHK 10
CP C H+
Sbjct: 73 CPYCGHE 79


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 4 CPKCKHK 10
CP C H+
Sbjct: 73 CPYCGHE 79


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 4 CPKCKHK 10
CP C H+
Sbjct: 73 CPYCGHE 79


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 4 CPKCKHK 10
CP C H+
Sbjct: 73 CPYCGHE 79


>sp|IF2G_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 4 CPKCKHK 10
CP C H+
Sbjct: 73 CPYCGHE 79


>sp|TFS_METJA|TRANSCRIPTION factor S|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FQCPKCKH 9
+CPKC H
Sbjct: 67 IECPKCGH 74


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VFQCPKC 7
+F CP C
Sbjct: 7 LFGCPNC 13


>sp|TFE_METBU|TRANSCRIPTION factor E|Methanococcoides burtonii (strain DSM 6242

Query: 2 FQCPKC 7
F CP C
Sbjct: 133 FMCPAC 138


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FQCPKC 7
++CPKC
Sbjct: 648 WKCPKC 653


>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 2 FQCPKC 7
+ CPKC
Sbjct: 113 YVCPKC 118


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VFQCPKCKH 9
V++C +C H
Sbjct: 482 VWECEECGH 490


>sp|TFE_METST|TRANSCRIPTION factor E|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FQCPKCKHK 10
F CP+C K
Sbjct: 147 FICPRCNEK 155


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 QCPKCK 8
+CP CK
Sbjct: 169 RCPTCK 174


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 QCPKCK 8
+CP CK
Sbjct: 169 RCPTCK 174


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 3 QCPKC 7
+CPKC
Sbjct: 355 KCPKC 359


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 4 CPKCKHK 10
CPKC +
Sbjct: 356 CPKCNSQ 362


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VFQCPKCKHK 10
V++C KC +
Sbjct: 18 VYKCKKCGER 27


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 2 FQCPKC 7
F CP+C
Sbjct: 216 FVCPEC 221


>sp|RL37A_PYRAE|LARGE ribosomal subunit protein eL43|Pyrobaculum aerophilum (strain

Query: 1 VFQCPKC 7
+++CPKC
Sbjct: 56 IWRCPKC 62


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 2 FQCPKCKHK 10
++C C H+
Sbjct: 327 YECASCGHR 335


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 VFQCPKC 7
V +CPKC
Sbjct: 608 VGKCPKC 614


>sp|HYPA_PYRFU|HYDROGENASE maturation factor HypA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VFQCPKCKH 9
VF+C C H
Sbjct: 70 VFKCRNCGH 78


Query: 2 FQCPKC 7
CPKC
Sbjct: 108 LSCPKC 113


>sp|Y819_METVS|UPF0212 protein Mevan_0819|Methanococcus vannielii (strain ATCC 35089

Query: 4 CPKC 7
CPKC
Sbjct: 52 CPKC 55


>sp|Y753_METM7|UPF0212 protein MmarC7_0753|Methanococcus maripaludis (strain C7 /

Query: 4 CPKC 7
CPKC
Sbjct: 52 CPKC 55


>sp|Y273_META3|UPF0212 protein Maeo_0273|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 CPKC 7
CPKC
Sbjct: 52 CPKC 55


>sp|Y1509_METMP|UPF0212 protein MMP1509|Methanococcus maripaludis (strain DSM 14266

Query: 4 CPKC 7
CPKC
Sbjct: 52 CPKC 55


>sp|Y1509_METMI|UPF0212 protein in gatA 3'region|Methanococcus maripaludis (Methanococcus

Query: 4 CPKC 7
CPKC
Sbjct: 52 CPKC 55


>sp|Y1165_METM6|UPF0212 protein MmarC6_1165|Methanococcus maripaludis (strain C6 /

Query: 4 CPKC 7
CPKC
Sbjct: 52 CPKC 55


>sp|Y068_METM5|UPF0212 protein MmarC5_0068|Methanococcus maripaludis (strain C5 /

Query: 4 CPKC 7
CPKC
Sbjct: 52 CPKC 55


>sp|Y068_METJA|UPF0212 protein MJ0068|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CPKC 7
CPKC
Sbjct: 52 CPKC 55


>sp|THIRX_METJA|THIOREDOXIN jannaschii (strain ATCC 43067

Query: 4 CPKCKH 9
CPKC
Sbjct: 15 CPKCNQ 20


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 4 CPKC 7
CPKC
Sbjct: 738 CPKC 741


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CPKC 7
CPKC
Sbjct: 598 CPKC 601


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 4 CPKC 7
CPKC
Sbjct: 359 CPKC 362


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 4 CPKC 7
CPKC
Sbjct: 355 CPKC 358


>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain DSM

Query: 4 CPKC 7
CPKC
Sbjct: 354 CPKC 357


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 4 CPKC 7
CPKC
Sbjct: 355 CPKC 358


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 4 CPKC 7
CPKC
Sbjct: 171 CPKC 174


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 4 CPKC 7
CPKC
Sbjct: 171 CPKC 174


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 CPKC 7
CPKC
Sbjct: 128 CPKC 131


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain DSM

Query: 4 CPKC 7
CPKC
Sbjct: 1044 CPKC 1047


>sp|RL37A_THEAC|LARGE ribosomal subunit protein eL43|Thermoplasma acidophilum (strain

Query: 1 VFQCPKCKHK 10
++ CP CK K
Sbjct: 36 LYTCPSCKKK 45


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 4 CPKC 7
CPKC
Sbjct: 128 CPKC 131


>sp|HYPA_THEGJ|HYDROGENASE maturation factor HypA|Thermococcus gammatolerans (strain DSM

Query: 1 VFQCPKCKH 9
VF+C C H
Sbjct: 70 VFKCRNCGH 78


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FQCPKC 7
+ CPKC
Sbjct: 149 YICPKC 154


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VFQCPKC 7
V +CPKC
Sbjct: 603 VGKCPKC 609


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 4 CPKCKH 9
CP C H
Sbjct: 377 CPGCPH 382


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CPKCK 8
CPKC+
Sbjct: 124 CPKCQ 128


>sp|HYPA_METM7|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C7 /

Query: 4 CPKCKHK 10
CPKC+ +
Sbjct: 97 CPKCESR 103


>sp|HYPA_METM6|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C6 /

Query: 3 QCPKCK 8
+CPKC+
Sbjct: 96 RCPKCE 101


>sp|HYPA_METJA|HYDROGENASE maturation factor HypA|Methanocaldococcus jannaschii (strain ATCC

Query: 4 CPKCK 8
CPKCK
Sbjct: 97 CPKCK 101


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VFQCPKCKHK 10
V QCP C ++
Sbjct: 140 VGQCPYCGYE 149


>sp|HYPA_METMP|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain DSM 14266

Query: 4 CPKCKHK 10
CPKC+ +
Sbjct: 97 CPKCESR 103


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CPKC 7
CPKC
Sbjct: 432 CPKC 435


>sp|HYPA_IGNH4|HYDROGENASE maturation factor HypA|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VFQCPKC 7
+ +CPKC
Sbjct: 108 LLKCPKC 114


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VFQCPKCKH 9
++ CPKC +
Sbjct: 398 LWYCPKCGY 406


Query: 4 CPKCKHK 10
CP+C K
Sbjct: 425 CPRCNTK 431


>sp|HYPA_METVS|HYDROGENASE maturation factor HypA|Methanococcus vannielii (strain ATCC 35089

Query: 3 QCPKC 7
+CPKC
Sbjct: 96 KCPKC 100


>sp|HYPA_METM5|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C5 /

Query: 4 CPKCKHK 10
CPKC+ +
Sbjct: 97 CPKCESR 103


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 3 QCPKC 7
+CPKC
Sbjct: 351 RCPKC 355


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 3 QCPKC 7
CPKC
Sbjct: 250 HCPKC 254


>sp|Y282_ARCFU|UPF0212 protein AF_0282|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CPKC 7
CPKC
Sbjct: 51 CPKC 54


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 4 CPKCKHK 10
CPK K+K
Sbjct: 392 CPKLKNK 398


>sp|Y972_METJA|UPF0056 membrane protein MJ0972|Methanocaldococcus jannaschii (strain ATCC

Query: 3 QCPKCKHK 10
+ PK KHK
Sbjct: 110 EIPKTKHK 117


>sp|RL37A_PYRNV|LARGE ribosomal subunit protein eL43|Pyrobaculum neutrophilum (strain

Query: 1 VFQCPKC 7
+++CPKC
Sbjct: 56 IWKCPKC 62


>sp|RL37A_THEVO|LARGE ribosomal subunit protein eL43|Thermoplasma volcanium (strain

Query: 1 VFQCPKCKHK 10
++ CP CK K
Sbjct: 36 LYTCPSCKKK 45


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 CPKC 7
CPKC
Sbjct: 131 CPKC 134


>sp|SCAF_METTH|DUF35 domain-containing scaffold protein|Methanothermobacter

Query: 4 CPKCKHK 10
CP+C+ K
Sbjct: 37 CPECRRK 43


>sp|KPTA_PYRAE|PROBABLE RNA 2'-phosphotransferase|Pyrobaculum aerophilum (strain ATCC

Query: 1 VFQCPKC 7
V++CP C
Sbjct: 4 VYKCPVC 10


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 3 QCPKC 7
+CPKC
Sbjct: 313 KCPKC 317


>sp|AMZA_PYRAE|ARCHAEMETZINCIN aerophilum (strain ATCC 51768

Query: 4 CPKCK 8
CPKC+
Sbjct: 144 CPKCR 148


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 4 CPKCKHK 10
CPK K+K
Sbjct: 392 CPKLKNK 398


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 4 CPKCKHK 10
CPK K+K
Sbjct: 392 CPKLKNK 398


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VFQCPKC 7
++ CPKC
Sbjct: 136 LYICPKC 142


>sp|RS27_ARCFU|SMALL ribosomal subunit protein eS27|Archaeoglobus fulgidus (strain

Query: 3 QCPKCKHK 10
+CP C+H+
Sbjct: 9 KCPDCEHE 16


>sp|PRIS_METJA|DNA primase small subunit PriS|Methanocaldococcus jannaschii (strain

Query: 1 VFQCPKCKHK 10
V + KCKH+
Sbjct: 100 VHKTKKCKHE 109


>sp|RS34_SACS2|SMALL ribosomal subunit protein aS34|Saccharolobus solfataricus (strain

Query: 1 VFQCPKCKHK 10
+++CPKC+ K
Sbjct: 35 LYKCPKCEKK 44


>sp|RUBY_METJA|PUTATIVE rubrerythrin|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QCPKCKH 9
+CP C H
Sbjct: 186 KCPSCSH 192


>sp|Z143_THEKO|ZINC-FINGER protein TK0143|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VFQCPKC 7
+F+CP+C
Sbjct: 17 LFRCPRC 23


>sp|HYPA_THEKO|HYDROGENASE maturation factor HypA|Thermococcus kodakarensis (strain ATCC

Query: 4 CPKC 7
CPKC
Sbjct: 110 CPKC 113


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 4 CPKC 7
CPKC
Sbjct: 251 CPKC 254


>sp|Y416_METJA|DOUBLE zinc ribbon protein MJ0416|Methanocaldococcus jannaschii (strain

Query: 1 VFQCPKCK 8
V +CP CK
Sbjct: 162 VLRCPNCK 169


>sp|CS12F_UNCAX|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f1|Uncultured archaeon

Query: 2 FQCPKCKHK 10
F+C KC K
Sbjct: 498 FKCEKCNFK 506




50|Sequence|246|255|KCKHKTHIFG

>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KCKHKTHI 8
+C H+THI
Sbjct: 196 ECMHRTHI 203


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 KCKHKTHI 8
+C H+THI
Sbjct: 196 ECMHRTHI 203


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KCKHKTHIFG 10
KC HIFG
Sbjct: 671 KCNDGMHIFG 680


>sp|KAD6_THEVO|PUTATIVE adenylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 CKHKTHIFG 10
C H +H+ G
Sbjct: 66 CSHYSHLLG 74


>sp|Y094_METJA|UNCHARACTERIZED protein MJ0094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KHKTHIF 9
K+KTH+F
Sbjct: 149 KNKTHLF 155


>sp|MRE11_METJA|DNA double-strand break repair protein|Methanocaldococcus jannaschii

Query: 1 KCKHKTHIFG 10
+CK+K +FG
Sbjct: 269 RCKNKPVVFG 278


>sp|CBPX1_SACS2|THERMOSTABLE carboxypeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 CKHKTHI 8
C H TH+
Sbjct: 106 CGHDTHV 112


>sp|CBPX2_SACS2|THERMOSTABLE carboxypeptidase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 CKHKTHI 8
C H TH+
Sbjct: 106 CGHDTHV 112




51|Sequence|251|260|THIFGADGAR

>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HIFGADGAR 10
HIFG DG+R
Sbjct: 126 HIFGVDGSR 134


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IFGADGAR 10
+FGADG+R
Sbjct: 366 LFGADGSR 373


>sp|Y949_METTH|UPF0216 protein MTH_949|Methanothermobacter thermautotrophicus (strain

Query: 2 HIFGADGAR 10
H+ GADG R
Sbjct: 38 HVTGADGTR 46


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 THIFGADG 8
T I+GADG
Sbjct: 457 TRIYGADG 464


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 THIFGADGAR 10
THI ADG R
Sbjct: 181 THILFADGRR 190


>sp|Y2340_ARCFU|UNCHARACTERIZED protein AF_2340|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 THIFGADG 8
THIF A+G
Sbjct: 53 THIFRAEG 60


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 IFGADGAR 10
+FGADG +
Sbjct: 1050 LFGADGTK 1057


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 IFGADGAR 10
+FGADG +
Sbjct: 1460 LFGADGTK 1467


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HIFGADGA 9
+IFG DGA
Sbjct: 407 NIFGNDGA 414


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IFGADGAR 10
I GADGA+
Sbjct: 142 IVGADGAK 149


>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IFGADGAR 10
+FG DG R
Sbjct: 4 LFGTDGVR 11


>sp|Y1382_METTH|UNCHARACTERIZED transporter MTH_1382|Methanothermobacter thermautotrophicus (strain

Query: 1 THIFGADGAR 10
+HI G +G+R
Sbjct: 148 SHISGGEGSR 157


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 IFGADGA 9
++GADGA
Sbjct: 700 VYGADGA 706




52|Sequence|256|265|ADGARKLAQT

>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ADGARKLAQT 10
ADG RKLA T
Sbjct: 252 ADGTRKLAHT 261


>sp|SYP_PYRNV|PROLINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ADGARKLAQT 10
ADG RKLA T
Sbjct: 251 ADGTRKLAHT 260


>sp|SYP_PYRIL|PROLINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DGARKLAQT 10
DG RKLA T
Sbjct: 253 DGTRKLAHT 261


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ADGARKLAQT 10
ADG R+LA T
Sbjct: 252 ADGTRRLAHT 261


>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DGARKLAQT 10
DG+R+LA T
Sbjct: 253 DGSRRLAHT 261


>sp|SECD_METTH|PROTEIN-EXPORT membrane protein SecD|Methanothermobacter thermautotrophicus

Query: 2 DGARKLAQ 9
DGARK A+
Sbjct: 146 DGARKFAE 153


>sp|PSB1_CENSY|PROTEASOME subunit beta 1|Cenarchaeum symbiosum (strain A)

Query: 1 ADGARKLAQ 9
A+GAR++AQ
Sbjct: 183 ANGAREIAQ 191


>sp|SECD_METKA|PROTEIN-EXPORT membrane protein SecD|Methanopyrus kandleri (strain AV19 /

Query: 1 ADGARKLAQ 9
A+GARK A+
Sbjct: 148 AEGARKFAE 156




53|Sequence|261|270|KLAQTLGLEV

>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 KLAQTLGLEV 10
KLA+ LGLE+
Sbjct: 502 KLAKMLGLEL 511


>sp|RNZ_METVS|RIBONUCLEASE Z|Methanococcus vannielii (strain ATCC 35089

Query: 1 KLAQTLGLEV 10
K A+TLG+E+
Sbjct: 166 KKAETLGIEI 175


>sp|LIVH_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 1 KLAQTLGLEV 10
LAQT+G++V
Sbjct: 187 SLAQTMGIDV 196


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLAQTLGLE 9
K+A+T GLE
Sbjct: 256 KVAETFGLE 264


>sp|DTDA_PYRAB|D-AMINOACYL-TRNA deacylase|Pyrococcus abyssi (strain GE5 /

Query: 2 LAQTLGLE 9
LAQ LGLE
Sbjct: 261 LAQELGLE 268


>sp|DTDA_PYRHO|D-AMINOACYL-TRNA deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LAQTLGLE 9
LAQ LGLE
Sbjct: 263 LAQELGLE 270


>sp|TAW22_PYRAB|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 2 LAQTLGLEV 10
+A++LGLEV
Sbjct: 46 IAKSLGLEV 54


>sp|METXA_METRM|HOMOSERINE O-acetyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 4 QTLGLEV 10
QTLG+EV
Sbjct: 332 QTLGVEV 338


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 4 QTLGLEV 10
QTLGL+V
Sbjct: 264 QTLGLDV 270


>sp|HCP_METMA|HYDROXYLAMINE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KLAQTLGLE 9
KLA+ GLE
Sbjct: 460 KLAEAFGLE 468


>sp|PANE_PYRAE|2-DEHYDROPANTOATE 2-reductase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 AQTLGLEV 10
AQTL LEV
Sbjct: 185 AQTLALEV 192


>sp|RS24_AERPE|SMALL ribosomal subunit protein eS24|Aeropyrum pernix (strain ATCC

Query: 1 KLAQTLGLEV 10
KLA+ LG+++
Sbjct: 56 KLAEVLGVDI 65


>sp|PGP_METAC|PHOSPHOGLYCOLATE phosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KLAQTLGLE 9
KLA+ +GLE
Sbjct: 156 KLAEIMGLE 164


>sp|IF6_HYPBU|TRANSLATION initiation factor 6|Hyperthermus butylicus (strain DSM 5456

Query: 1 KLAQTLGLEV 10
K+ +TLG+EV
Sbjct: 37 KIEETLGVEV 46




54|Sequence|266|275|LGLEVLGDIP

>sp|KTHY2_SACS2|PROBABLE thymidylate kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GLEVLGDIP 10
G+++LG+IP
Sbjct: 151 GIDILGEIP 159


>sp|Y823_METJA|UNCHARACTERIZED ATP-binding protein MJ0823|Methanocaldococcus jannaschii (strain

Query: 1 LGLEVLGDIP 10
LGLEVLG +P
Sbjct: 209 LGLEVLGFVP 218


>sp|MRE11_THEAC|DNA double-strand break repair protein|Thermoplasma acidophilum (strain

Query: 1 LGLEVLGDI 9
+GLE+ GDI
Sbjct: 281 VGLEIHGDI 289


>sp|BIOD_NITMS|ATP-DEPENDENT dethiobiotin synthetase BioD|Nitrosopumilus maritimus (strain SCM1)

Query: 2 GLEVLGDIP 10
G++VLG IP
Sbjct: 195 GVKVLGSIP 203


>sp|GGGPS_META3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 EVLGDIP 10
E++GDIP
Sbjct: 65 EIIGDIP 71


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 GLEVLGDI 9
GLE+LG I
Sbjct: 405 GLEILGGI 412


>sp|SPSS1_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGLEVLGDIP 10
LG++ LGD P
Sbjct: 288 LGIKQLGDNP 297


>sp|RS8_CENSY|SMALL ribosomal subunit protein uS8|Cenarchaeum symbiosum (strain A)

Query: 1 LGLEVLGDI 9
LG+EVLG +
Sbjct: 33 LGVEVLGTL 41


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 1 LGLEVLGD 8
LGLE LG+
Sbjct: 281 LGLEALGE 288


>sp|CDC6G_HALMA|ORC1-TYPE DNA replication protein 7|Haloarcula marismortui (strain ATCC 43049

Query: 1 LGLEVLGDI 9
+GL+++GD+
Sbjct: 377 VGLDIVGDV 385


>sp|CAS6L_PYRFU|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6|Pyrococcus

Query: 4 EVLGDIP 10
EV+GD+P
Sbjct: 170 EVMGDLP 176


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 EVLGDIP 10
EV+GD+P
Sbjct: 339 EVVGDVP 345


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 EVLGDIP 10
EV+GD+P
Sbjct: 341 EVVGDVP 347


>sp|DNAK_METAR|CHAPERONE protein DnaK|Methanocella arvoryzae (strain DSM 22066

Query: 1 LGLEVLGDI 9
LG+E LG++
Sbjct: 370 LGIETLGNV 378


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GLEVLGDIP 10
G+E L D+P
Sbjct: 87 GIEALPDLP 95


>sp|G3P_METMJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GLEVLGDI 9
G+EV GD+
Sbjct: 65 GIEVAGDV 72


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 5 VLGDIP 10
VLGDIP
Sbjct: 504 VLGDIP 509


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GLEVLGDI 9
LE+LGD+
Sbjct: 288 ALEILGDL 295


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 3 LEVLGDIP 10
LE+L D+P
Sbjct: 667 LEILKDVP 674




55|Sequence|271|280|LGDIPLHLNI

>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 GDIPLHLNI 10
GD+PLH I
Sbjct: 95 GDLPLHKRI 103


>sp|LYSK_AERPE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Aeropyrum pernix (strain

Query: 2 GDIPLHL 8
GD PLH+
Sbjct: 142 GDTPLHI 148


>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LGDIPLHL 8
L ++PLHL
Sbjct: 65 LSNVPLHL 72


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LGDIPL 6
LGDIPL
Sbjct: 283 LGDIPL 288


>sp|RRP42_METKA|EXOSOME complex component Rrp42|Methanopyrus kandleri (strain AV19 /

Query: 1 LGDIPLHL 8
LGD P HL
Sbjct: 237 LGDFPEHL 244


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LGDIPL 6
LGDIPL
Sbjct: 277 LGDIPL 282


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 3 DIPLHLNI 10
DIP+H+++
Sbjct: 214 DIPVHIHL 221


>sp|COFD_METTH|2-PHOSPHO-L-LACTATE transferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LGDIPLH 7
LG++PLH
Sbjct: 109 LGEMPLH 115


>sp|AMZA_HALSA|ARCHAEMETZINCIN salinarum (strain ATCC 700922

Query: 1 LGDIPLHL 8
+GD+P H+
Sbjct: 8 VGDVPAHV 15


>sp|AMZA_HALS3|ARCHAEMETZINCIN salinarum (strain ATCC 29341

Query: 1 LGDIPLHL 8
+GD+P H+
Sbjct: 8 VGDVPAHV 15


>sp|PRIS_METTP|DNA primase small subunit PriS|Methanothrix thermoacetophila (strain

Query: 1 LGDIPLHLNI 10
GD P+H+ I
Sbjct: 347 FGDDPVHVEI 356


>sp|PMDHS_METKA|PHOSPHOMEVALONATE dehydratase small subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 LGDIPL 6
LGDIPL
Sbjct: 102 LGDIPL 107


>sp|PFDA_METLZ|PREFOLDIN subunit alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GDIPLHLNI 10
GD+P LN+
Sbjct: 60 GDVPTLLNL 68


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 1 LGDIPLHL 8
LG+IP H+
Sbjct: 232 LGEIPHHM 239




56|Sequence|276|285|LHLNIREASD

>sp|CHEB_THEKO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Thermococcus

Query: 3 LNIREASD 10
LN++EA D
Sbjct: 218 LNVKEAED 225


>sp|TRMJ_METJA|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Methanocaldococcus

Query: 1 LHLNIREAS 9
L +N+REAS
Sbjct: 167 LDINMREAS 175




57|Sequence|281|290|REASDTGQPI

>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 REASDTGQPI 10
REASD G PI
Sbjct: 253 REASDLGIPI 262


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 1 REASDTGQPI 10
REASD G PI
Sbjct: 253 REASDLGIPI 262


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 REASDTGQPI 10
REASD G PI
Sbjct: 253 REASDLGIPI 262


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 REASDTGQPI 10
REASD G P+
Sbjct: 254 REASDKGIPM 263


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 EASDTGQPI 10
EAS+ G P+
Sbjct: 521 EASEKGHPV 529


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 EASDTGQPI 10
EAS+ G P+
Sbjct: 521 EASEKGHPV 529


>sp|RS2_METS5|SMALL ribosomal subunit protein uS2|Metallosphaera sedula (strain ATCC

Query: 1 REASDTGQPI 10
+EA+D G P+
Sbjct: 152 KEAADMGIPV 161


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 REASDTGQPI 10
+EAS G PI
Sbjct: 342 KEASAAGMPI 351


>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 2 EASDTGQP 9
EA+D G+P
Sbjct: 260 EANDAGEP 267




58|Sequence|286|295|TGQPIVFSQP

>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GQPIVFSQP 10
G PIV SQP
Sbjct: 117 GNPIVMSQP 125


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GQPIVFSQP 10
G PIV SQP
Sbjct: 117 GNPIVMSQP 125


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 GQPIVFSQP 10
G PIV SQP
Sbjct: 114 GNPIVMSQP 122


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 GQPIVFSQ 9
GQPIVF Q
Sbjct: 495 GQPIVFGQ 502


>sp|G1PDH_HALMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloarcula marismortui (strain ATCC 43049

Query: 1 TGQPIVFSQP 10
TG+P+V S P
Sbjct: 34 TGRPLVVSSP 43


>sp|G1PDH_HALSA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halobacterium salinarum (strain ATCC

Query: 1 TGQPIVFSQP 10
TG+P+V + P
Sbjct: 34 TGRPLVVTSP 43


>sp|G1PDH_HALS3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halobacterium salinarum (strain ATCC

Query: 1 TGQPIVFSQP 10
TG+P+V + P
Sbjct: 34 TGRPLVVTSP 43


>sp|G1PDH_HALLT|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halorubrum lacusprofundi (strain ATCC

Query: 1 TGQPIVFSQP 10
TG+P++ + P
Sbjct: 34 TGRPLIVTSP 43


>sp|FTSY_METAC|SIGNAL recognition particle receptor FtsY|Methanosarcina acetivorans

Query: 1 TGQPIVF 7
TG+PI+F
Sbjct: 386 TGKPILF 392


>sp|FTSY_HALVD|SIGNAL recognition particle receptor FtsY|Haloferax volcanii (strain ATCC

Query: 1 TGQPIVF 7
TG+PI+F
Sbjct: 423 TGKPILF 429


>sp|TTDA_METJA|PUTATIVE L(+)-tartrate dehydratase subunit alpha|Methanocaldococcus

Query: 1 TGQPIVF 7
TG PIVF
Sbjct: 63 TGVPIVF 69


>sp|WTPA_ARCFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TGQPIVF 7
TG+PIV+
Sbjct: 279 TGKPIVY 285




59|Sequence|291|300|VFSQPESDEA

>sp|WTPC_PYRHO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus horikoshii (strain ATCC

Query: 1 VFSQPESDE 9
VFS+P+S+E
Sbjct: 218 VFSKPKSEE 226


>sp|WTPC_PYRFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus furiosus (strain ATCC

Query: 1 VFSQPESDE 9
VFS+P S+E
Sbjct: 218 VFSRPNSEE 226


>sp|DAPF_META3|DIAMINOPIMELATE epimerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VFSQPESDE 9
+F QP +DE
Sbjct: 51 IFVQPATDE 59


>sp|WTPC_THEKO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Thermococcus kodakarensis (strain

Query: 1 VFSQPESDE 9
VFS+P S+E
Sbjct: 219 VFSRPASEE 227


>sp|HCY_NATPH|HALOCYANIN pharaonis (Natronobacterium pharaonis)

Query: 1 VFSQPESD 8
V S+PESD
Sbjct: 112 VVSEPESD 119


>sp|KAD_HALMA|ADENYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 2 FSQPESD 8
F+QPE D
Sbjct: 140 FNQPEED 146




60|Sequence|296|305|ESDEAKAYLR

>sp|MVK_SACS2|MEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ESDEAKAYLR 10
ESDEAK LR
Sbjct: 66 ESDEAKKVLR 75


>sp|GLKA_THELN|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus litoralis (strain ATCC

Query: 1 ESDEAKAYLR 10
ES+E + YLR
Sbjct: 100 ESEEVRRYLR 109


>sp|RL22_AERPE|LARGE ribosomal subunit protein uL22|Aeropyrum pernix (strain ATCC

Query: 3 DEAKAYLR 10
DEA+ YLR
Sbjct: 44 DEARRYLR 51


>sp|PSA_METMJ|PROTEASOME subunit alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ESDEAKAYL 9
E DE KAY+
Sbjct: 227 EKDEVKAYV 235


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DEAKAYL 9
DEAK+YL
Sbjct: 494 DEAKSYL 500


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 SDEAKAYL 9
S+EAK YL
Sbjct: 386 SNEAKVYL 393


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SDEAKAYLR 10
SDE K Y+R
Sbjct: 50 SDEEKEYIR 58


>sp|CAPPA_SULAC|PHOSPHOENOLPYRUVATE carboxylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DEAKAYLR 10
DEAK Y++
Sbjct: 494 DEAKTYIK 501


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 SDEAKAYL 9
S+EAK YL
Sbjct: 388 SNEAKVYL 395


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 ESDEAKAYL 9
E DEAK Y+
Sbjct: 338 EKDEAKKYV 346


>sp|Y945_METJA|UNCHARACTERIZED protein MJ0945|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESDEAKAYLR 10
ESD K Y R
Sbjct: 115 ESDSPKIYFR 124


>sp|FLPA_PYRFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 3 DEAKAYLR 10
D AKAYL+
Sbjct: 162 DNAKAYLK 169




61|Sequence|301|310|KAYLRIAVEV

>sp|SYK_METMJ|LYSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KAYLRIAVEV 10
K YLRIA E+
Sbjct: 222 KLYLRIAPEL 231


>sp|TYW32_THEKO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 AYLRIAVEV 10
YLR AVE+
Sbjct: 156 GYLRFAVEI 164


>sp|SYK_METHJ|LYSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KAYLRIAVEV 10
K YLRIA E+
Sbjct: 222 KLYLRIAPEL 231




62|Sequence|306|319|IAVEVVRRLPSPSE

>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 VVRRLPSPSE 14
VVR LPSP E
Sbjct: 257 VVRHLPSPKE 266


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 VVRRLPSPSE 14
VVR LPSP E
Sbjct: 252 VVRHLPSPIE 261


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 5 VVRRLPSPSE 14
VVR LPSP E
Sbjct: 252 VVRHLPSPIE 261


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 5 VVRRLPSPSE 14
VVR LPSP E
Sbjct: 252 VVRHLPSPIE 261


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VEVVRRLPSPSE 14
VEVVR LP+ S+
Sbjct: 294 VEVVRTLPTQSK 305


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 3 VEVVRRLPSPSE 14
VEVVR LP+ S+
Sbjct: 294 VEVVRTLPTQSK 305


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC 43049

Query: 3 VEVVRRLPSPSE 14
VEVVR LP+ S+
Sbjct: 406 VEVVRTLPTQSK 417


>sp|CDC67_HALSA|ORC1-TYPE DNA replication protein 7|Halobacterium salinarum (strain ATCC

Query: 3 VEVVRRLPSPSE 14
VEVVR LP+ S+
Sbjct: 399 VEVVRTLPTQSK 410


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 4 EVVRRLPSPS 13
E+VR+LP PS
Sbjct: 409 EMVRKLPVPS 418


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 VVRRLPSPSE 14
V+R LPSP E
Sbjct: 250 VIRHLPSPIE 259


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 VVRRLPSPSE 14
VV LPSP+E
Sbjct: 252 VVEHLPSPAE 261


>sp|NDK_PYRAE|NUCLEOSIDE diphosphate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AVEVVRRLPSPS 13
AVE+VR+L P+
Sbjct: 115 AVEIVRKLVGPT 126


>sp|TRUD_THEKO|PROBABLE tRNA pseudouridine synthase D|Thermococcus kodakarensis (strain

Query: 2 AVEVVRRLPSP 12
++E RRLP P
Sbjct: 356 SLETFRRLPKP 366


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 5 VVRRLPSPSE 14
VVR LP+P E
Sbjct: 252 VVRHLPNPVE 261


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IAVEVVRRLPSPSE 14
+AVEVV+ SPS+
Sbjct: 249 LAVEVVQERRSPSD 262


>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 1 IAVEVVRRLPS 11
IAVE++RRL +
Sbjct: 545 IAVELLRRLEN 555


>sp|GSA_METS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IAVEVVRRLPS 11
+A EVV R+PS
Sbjct: 91 LAKEVVDRIPS 101


>sp|MOAA_HALWD|PROBABLE GTP 3',8-cyclase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 EVVRRLPSPSE 14
E++RR PS E
Sbjct: 82 EIIRRTPSSME 92


>sp|MIG_PYRAE|THYMINE/URACIL-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IAVEVVRRLPSPS 13
I E +RR PSP+
Sbjct: 60 IYREFLRRYPSPA 72


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 3 VEVVRRLP 10
+EVV+RLP
Sbjct: 918 IEVVKRLP 925


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IAVEVVRRLP 10
+A EVV+R+P
Sbjct: 96 LAKEVVKRVP 105


>sp|NFI_DESA1|ENDONUCLEASE V|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 AVEVVRRLPSPS 13
AVEVVR L P
Sbjct: 184 AVEVVRHLMEPG 195


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 VVRRLPSPSE 14
V++ LPSP E
Sbjct: 252 VIKHLPSPPE 261


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IAVEVVRRLP 10
+A EV++R+P
Sbjct: 94 LAKEVIKRVP 103


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IAVEVVRRLP 10
+A E+++R+P
Sbjct: 101 LAKEIIKRMP 110


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 5 VVRRLPSPSE 14
VVR LP+P E
Sbjct: 252 VVRHLPNPLE 261


>sp|HMD_METTH|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 EVVRRLPSPSE 14
EV + LP P E
Sbjct: 102 EVAKELPKPPE 112


>sp|HMD_METTF|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus

Query: 4 EVVRRLPSPSE 14
EV + LP P E
Sbjct: 102 EVAKELPKPPE 112


>sp|NDK_PYRHO|NUCLEOSIDE diphosphate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AVEVVRRLPSPSE 14
AVEVVR++ ++
Sbjct: 83 AVEVVRKMAGATD 95


>sp|HMD_METTW|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus (strain Winter)

Query: 4 EVVRRLPSPSE 14
EV + LP P E
Sbjct: 102 EVAKELPKPPE 112


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 5 VVRRLPSPSE 14
VVR LP+P E
Sbjct: 252 VVRHLPNPLE 261


>sp|HMD_METTM|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 EVVRRLPSPSE 14
EV + LP P E
Sbjct: 102 EVAKELPKPPE 112


>sp|RTCA_PYRIL|RNA 3'-terminal phosphate cyclase|Pyrobaculum islandicum (strain DSM

Query: 1 IAVEVVRRLPSP 12
IA+E+VRR P
Sbjct: 148 IAIELVRRGHYP 159


>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 5 VVRRLPSPS 13
VV+ LPSP+
Sbjct: 252 VVKHLPSPN 260


>sp|SYH_PYRAR|HISTIDINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 AVEVVRRLPS 11
AVEV+RRL
Sbjct: 230 AVEVLRRLDG 239


>sp|NDK_HYPBU|NUCLEOSIDE diphosphate kinase|Hyperthermus butylicus (strain DSM 5456

Query: 2 AVEVVRRLPSPSE 14
A+EVVR + P++
Sbjct: 82 AIEVVRLMIGPTD 94


>sp|NADE_SULTO|NH(3)-DEPENDENT NAD(+) synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 EVVRRLPSPS 13
E+V++ PSP+
Sbjct: 186 EIVKKPPSPA 195


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 3 VEVVRRLP 10
VE++RRLP
Sbjct: 596 VELLRRLP 603


>sp|RL6_METTP|LARGE ribosomal subunit protein uL6|Methanothrix thermoacetophila

Query: 4 EVVRRLPSPS 13
EVVRRL P
Sbjct: 4 EVVRRLDIPD 13


>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 5 VVRRLPSP 12
V+R LPSP
Sbjct: 252 VIRFLPSP 259


>sp|THIL_PYRCJ|THIAMINE-MONOPHOSPHATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 VVRRLPSPSE 14
VV+ LP+P E
Sbjct: 213 VVKELPAPRE 222


>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 5 VVRRLPSP 12
V+R LPSP
Sbjct: 252 VIRFLPSP 259


>sp|RS15_PYRAR|SMALL ribosomal subunit protein uS15|Pyrobaculum arsenaticum (strain

Query: 1 IAVEVVRRLPSPSE 14
+AVE+ RR PS+
Sbjct: 39 LAVELARRGFQPSQ 52


>sp|TRUD_PYRHO|PROBABLE tRNA pseudouridine synthase D|Pyrococcus horikoshii (strain ATCC

Query: 1 IAVEVVRRLPSP 12
+++E +RLP P
Sbjct: 349 VSLENFKRLPKP 360


>sp|NFI_IGNH4|ENDONUCLEASE V|Ignicoccus hospitalis (strain KIN4/I /

Query: 6 VRRLPSP 12
VRRLP P
Sbjct: 187 VRRLPEP 193


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 VVRRLPSPSE 14
++R LPSP E
Sbjct: 252 IIRFLPSPLE 261


>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC 700922

Query: 4 EVVRRLPSP 12
EVVRR+ +P
Sbjct: 133 EVVRRVDAP 141


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 5 VVRRLPSPSE 14
V++ LP+P E
Sbjct: 252 VIKNLPNPRE 261






THE END