1|Sequence|1|10|MPCVQAQYGS
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 PCVQAQYGS 10
PC+ +YGS
Sbjct: 284 PCIPLRYGS 292
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 2 PCVQAQ 7
PC+QA+
Sbjct: 607 PCIQAK 612
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 PCVQAQ 7
PC+Q+Q
Sbjct: 212 PCIQSQ 217
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 PCVQAQ 7
PC+Q+Q
Sbjct: 212 PCIQSQ 217
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 2 PCVQAQ 7
PC+Q+Q
Sbjct: 212 PCIQSQ 217
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 PCVQAQ 7
PC+Q+Q
Sbjct: 212 PCIQSQ 217
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 PCVQAQ 7
PC+Q+Q
Sbjct: 212 PCIQSQ 217
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 PCVQAQ 7
PC+Q+Q
Sbjct: 212 PCIQSQ 217
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 PCVQAQ 7
PC+Q+Q
Sbjct: 212 PCIQSQ 217
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 PCVQAQ 7
PC+Q+Q
Sbjct: 212 PCIQSQ 217
2|Sequence|6|15|AQYGSSPQGA
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 YGSSPQGA 10
YGS P G+
Sbjct: 2036 YGSMPSGS 2043
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 YGSSPQGA 10
YGS P G+
Sbjct: 2035 YGSMPSGS 2042
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 YGSSPQGA 10
YGS P G+
Sbjct: 2033 YGSMPSGS 2040
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 YGSSPQGA 10
YGS P G+
Sbjct: 2035 YGSMPSGS 2042
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 3 YGSSPQG 9
Y S+PQG
Sbjct: 152 YASAPQG 158
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 3 YGSSPQG 9
Y S+PQG
Sbjct: 152 YASAPQG 158
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 3 YGSSPQG 9
Y S+PQG
Sbjct: 152 YASAPQG 158
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 3 YGSSPQ 8
YGS PQ
Sbjct: 368 YGSCPQ 373
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 AQYGSSPQG 9
+QYG P G
Sbjct: 384 SQYGLDPSG 392
3|Sequence|11|20|SPQGASPASQ
>sp|CEP3_HHV1K|CYTOPLASMIC envelopment protein 3|Human herpesvirus 1 (strain KOS)
Query: 1 SPQGASPASQ 10
+P GA PA+Q
Sbjct: 78 TPGGACPATQ 87
>sp|CEP3_HHV11|CYTOPLASMIC envelopment protein 3|Human herpesvirus 1 (strain 17)
Query: 1 SPQGASPASQ 10
+P GA PA+Q
Sbjct: 78 TPGGACPATQ 87
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 PQGASPAS 9
P GASP S
Sbjct: 2277 PSGASPWS 2284
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 PQGASPASQ 10
P+G P SQ
Sbjct: 1511 PKGTFPVSQ 1519
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PQGASPA 8
P GASP+
Sbjct: 178 PSGASPS 184
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 PQGASPASQ 10
P+G P SQ
Sbjct: 1503 PKGTFPVSQ 1511
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 PQGASPASQ 10
P+G P SQ
Sbjct: 1502 PKGTFPVSQ 1510
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 2 PQGASPASQ 10
P G PAS+
Sbjct: 724 PDGTIPASK 732
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 2 PQGASPASQ 10
P G PAS+
Sbjct: 724 PDGTIPASK 732
>sp|VP6_ROTGI|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Rat/United
Query: 2 PQGASP 7
PQG SP
Sbjct: 306 PQGTSP 311
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 2 PQGASPASQ 10
PQGA P S
Sbjct: 269 PQGAEPQSN 277
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 2 PQGASPASQ 10
PQGA P S
Sbjct: 269 PQGAEPQSN 277
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 2 PQGASPAS 9
PQGA P S
Sbjct: 269 PQGAEPQS 276
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 2 PQGASPASQ 10
PQGA P S
Sbjct: 269 PQGAEPQSN 277
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 2 PQGASPAS 9
PQGA P S
Sbjct: 269 PQGAEPQS 276
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 2 PQGASPASQ 10
PQGA P S
Sbjct: 269 PQGAEPQSN 277
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 2 PQGASPASQ 10
PQ +SP SQ
Sbjct: 500 PQDSSPQSQ 508
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PQGASPA 8
P+G SPA
Sbjct: 393 PEGTSPA 399
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 1 SPQGASPASQ 10
+P+GA ASQ
Sbjct: 125 APKGAPNASQ 134
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SPQGASPAS 9
+P+GA+P++
Sbjct: 467 TPRGATPSA 475
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SPQGASPAS 9
+P+GA+P++
Sbjct: 467 TPRGATPSA 475
4|Sequence|16|25|SPASQSYSYH
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 SQSYSYH 10
S SY YH
Sbjct: 816 SHSYRYH 822
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 PASQSYSY 9
P+S SY+Y
Sbjct: 690 PSSASYTY 697
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 PASQSYSY 9
P+S SY+Y
Sbjct: 690 PSSASYTY 697
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 2 PASQSYSY 9
P+S SY+Y
Sbjct: 690 PSSASYTY 697
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 PASQSYSYH 10
P QSY++H
Sbjct: 201 PLFQSYAHH 209
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 SQSYSYH 10
SQ+YS+H
Sbjct: 217 SQNYSFH 223
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 SQSYSYH 10
SQ+YS+H
Sbjct: 218 SQNYSFH 224
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 SPASQSY 7
+PA QSY
Sbjct: 1354 APAEQSY 1360
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 SPASQSY 7
+PA QSY
Sbjct: 1354 APAEQSY 1360
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 SPASQSY 7
+PA QSY
Sbjct: 1354 APAEQSY 1360
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 SPASQSY 7
+PA QSY
Sbjct: 1354 APAEQSY 1360
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 SQSYSYH 10
SQ+YS+H
Sbjct: 218 SQNYSFH 224
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 4 SQSYSYH 10
SQ+YS+H
Sbjct: 217 SQNYSFH 223
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 SPASQSY 7
+PA QSY
Sbjct: 1354 APAEQSY 1360
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 PASQSYSY 9
P+S +Y+Y
Sbjct: 685 PSSATYTY 692
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 PASQSYSYH 10
P QSY++H
Sbjct: 201 PLFQSYAHH 209
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 4 SQSYSYH 10
+Q YSYH
Sbjct: 24 NQQYSYH 30
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 1 SPASQSYSY 9
SP++ +YSY
Sbjct: 342 SPSTNNYSY 350
5|Sequence|21|30|SYSYHSSGEY
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 SYSYHSSGEY 10
S+S HS GE+
Sbjct: 3326 SWSIHSKGEW 3335
Query: 1 SYSYHSS 7
SY YH+S
Sbjct: 352 SYCYHAS 358
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 SYSYHSSGEY 10
S+S HS GE+
Sbjct: 3326 SWSIHSKGEW 3335
Query: 1 SYSYHSS 7
SY YH+S
Sbjct: 352 SYCYHAS 358
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 SYSYHSSGEY 10
S+S HS GE+
Sbjct: 3326 SWSIHSKGEW 3335
Query: 1 SYSYHSS 7
SY YH+S
Sbjct: 352 SYCYHAS 358
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 SYSYHSSGEY 10
S+S HS GE+
Sbjct: 3326 SWSIHSKGEW 3335
Query: 1 SYSYHSS 7
SY YH+S
Sbjct: 352 SYCYHAS 358
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 SYSYHSSGEY 10
S+S H++GE+
Sbjct: 3328 SWSVHATGEW 3337
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 SYSYHSSGEY 10
++S H+SGE+
Sbjct: 3307 TWSIHASGEW 3316
>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SYSYHSSGEY 10
S SYH +G Y
Sbjct: 355 STSYHETGVY 364
>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SYSYHSSGEY 10
S SYH +G Y
Sbjct: 354 STSYHETGVY 363
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 SYSYHSS 7
SY YH+S
Sbjct: 280 SYCYHAS 286
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 SYSYHSSGEY 10
++S H++GE+
Sbjct: 3286 TWSIHATGEW 3295
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 YSYHSSGEY 10
+SYH SG +
Sbjct: 136 WSYHMSGTH 144
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 YSYHSSGEY 10
+SYH SG +
Sbjct: 136 WSYHMSGTH 144
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 SYSYHSS 7
SY YH+S
Sbjct: 352 SYCYHAS 358
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 SYSYHSS 7
SY YH+S
Sbjct: 352 SYCYHAS 358
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 SYSYHSS 7
SY YH+S
Sbjct: 352 SYCYHAS 358
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 SYSYHSS 7
SY YH+S
Sbjct: 352 SYCYHAS 358
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 YSYHSSGE 9
Y Y SSGE
Sbjct: 1500 YRYVSSGE 1507
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 YSYHSSGEY 10
+SYH SG +
Sbjct: 136 WSYHMSGTH 144
>sp|VP7_ROTGA|OUTER capsid glycoprotein VP7|Rotavirus B (isolate
Query: 2 YSYHSSGEY 10
Y++HSS E+
Sbjct: 176 YTFHSSEEF 184
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 SYSYHSSGEY 10
++S H+ GE+
Sbjct: 3324 TWSIHAKGEW 3333
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 SYSYHSSGEY 10
++S H+ GE+
Sbjct: 3327 TWSIHAGGEW 3336
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 SYSYHSSGEY 10
++S H+ GE+
Sbjct: 3327 TWSIHAGGEW 3336
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 YSYHSSGE 9
Y Y SSGE
Sbjct: 1503 YRYVSSGE 1510
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 4 YHSSGEY 10
Y SSG+Y
Sbjct: 32 YRSSGDY 38
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 YSYHSSGE 9
Y Y SSGE
Sbjct: 1503 YRYVSSGE 1510
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 SYSYHSS 7
SY YH S
Sbjct: 818 SYRYHPS 824
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3303 TWSIHGKGEW 3312
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 YSYHSSGE 9
Y Y SSGE
Sbjct: 1500 YRYVSSGE 1507
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 YSYHSSG 8
Y++H SG
Sbjct: 825 YAFHPSG 831
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3322 TWSIHGKGEW 3331
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 YSYHSSGE 9
Y Y SSGE
Sbjct: 1503 YRYVSSGE 1510
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 YSYHSSGE 9
Y Y SSGE
Sbjct: 1503 YRYVSSGE 1510
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3305 TWSVHGKGEW 3314
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3305 TWSVHGKGEW 3314
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3316 TWSIHGKGEW 3325
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3316 TWSIHGKGEW 3325
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3312 TWSIHGKGEW 3321
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3304 TWSIHGKGEW 3313
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3304 TWSIHGKGEW 3313
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3304 TWSIHGKGEW 3313
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3304 TWSIHGKGEW 3313
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3304 TWSIHGKGEW 3313
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3304 TWSIHGKGEW 3313
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3297 TWSIHGKGEW 3306
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3319 TWSIHGKGEW 3328
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3323 TWSIHGKGEW 3332
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3319 TWSIHGKGEW 3328
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3328 TWSIHGKGEW 3337
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 SYSYHSSGEY 10
++S H GE+
Sbjct: 3317 TWSIHGKGEW 3326
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 SYSYHSSGEY 10
+Y+Y SG++
Sbjct: 3386 AYTYFYSGDF 3395
6|Sequence|26|35|SSGEYSSDFL
>sp|US8A_HHV2H|PROTEIN US8.5|Human herpesvirus 2 (strain HG52)
Query: 1 SSGEYSSD 8
SSG+ SSD
Sbjct: 48 SSGKASSD 55
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 4 EYSSDFL 10
EYS++FL
Sbjct: 862 EYSAEFL 868
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SSGEYSSDF 9
SSG Y+S F
Sbjct: 295 SSGAYTSLF 303
>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65
Query: 5 YSSDFL 10
YSSDF+
Sbjct: 497 YSSDFV 502
>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 SSGEYSSDF 9
SSG Y+S F
Sbjct: 295 SSGAYTSLF 303
7|Sequence|31|40|SSDFLTPEFV
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 1 SSDFLTPEF 9
S +F+TPEF
Sbjct: 23 SRNFITPEF 31
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 1 SSDFLTPEF 9
S F+TPEF
Sbjct: 23 SRSFITPEF 31
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 SDFLTPEFV 10
+ FLTP FV
Sbjct: 2285 ATFLTPVFV 2293
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 4 FLTPEFV 10
FL PEFV
Sbjct: 198 FLVPEFV 204
>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8
Query: 4 FLTPEFV 10
FLTP FV
Sbjct: 27 FLTPPFV 33
>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9
Query: 4 FLTPEFV 10
FLTP FV
Sbjct: 27 FLTPPFV 33
>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9
Query: 4 FLTPEFV 10
FLTP FV
Sbjct: 27 FLTPPFV 33
>sp|SPIKE_ADE15|FIBER protein|Human adenovirus D serotype 15
Query: 4 FLTPEFV 10
FLTP FV
Sbjct: 27 FLTPPFV 33
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 4 FLTPEFV 10
FLTP FV
Sbjct: 28 FLTPPFV 34
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 4 FLTPEFV 10
FLTP FV
Sbjct: 28 FLTPPFV 34
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SDFLTPEFV 10
+ FLTP FV
Sbjct: 706 TKFLTPVFV 714
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 2 SDFLTPEFV 10
+ FLTP FV
Sbjct: 383 TKFLTPVFV 391
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 DFLTPEF 9
D+LTP F
Sbjct: 73 DWLTPSF 79
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 DFLTPEF 9
D+LTP F
Sbjct: 73 DWLTPSF 79
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 3 DFLTPEF 9
D+LTP F
Sbjct: 73 DWLTPSF 79
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 3 DFLTPEF 9
D+LTP F
Sbjct: 73 DWLTPSF 79
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 3 DFLTPEF 9
D+LTP F
Sbjct: 73 DWLTPSF 79
>sp|PHOSP_ISFV|PHOSPHOPROTEIN virus (ISFV)
Query: 5 LTPEFV 10
+TPEFV
Sbjct: 284 ITPEFV 289
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 4 FLTPEFV 10
+LTPE V
Sbjct: 229 YLTPEMV 235
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 3 DFLTPEFV 10
+FL PE V
Sbjct: 107 EFLAPELV 114
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 FLTPEFV 10
+LTPE V
Sbjct: 229 YLTPEIV 235
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 SDFLTPE 8
S F+TPE
Sbjct: 2211 STFITPE 2217
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 3 DFLTPEFV 10
+FL PE V
Sbjct: 107 EFLAPELV 114
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 SDFLTPE 8
S F+TPE
Sbjct: 2211 STFITPE 2217
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 3 DFLTPEFV 10
DF P FV
Sbjct: 517 DFFLPAFV 524
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SSDFLTPEFV 10
+ D L+P+F+
Sbjct: 629 TDDDLSPDFI 638
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SSDFLTPEFV 10
+ D L+P+F+
Sbjct: 629 TDDDLSPDFI 638
>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)
Query: 4 FLTPEF 9
FLTPE
Sbjct: 43 FLTPEM 48
8|Sequence|36|45|TPEFVKFSMD
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 PEFVKFSMD 10
PEFVK +M+
Sbjct: 123 PEFVKLTME 131
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 PEFVKFSMD 10
PEFVK +M+
Sbjct: 123 PEFVKLTME 131
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 PEFVKFSMD 10
PEFVK +M+
Sbjct: 123 PEFVKLTME 131
>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain JI)
Query: 1 TPEFVKFSM 9
+P F+KFS+
Sbjct: 256 SPNFIKFSL 264
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 TPEFVKFSMD 10
TPE +K+ D
Sbjct: 1445 TPEIIKYCQD 1454
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 TPEFVKFSMD 10
TPE +K+ D
Sbjct: 1434 TPEVIKYCQD 1443
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 TPEFVKFSMD 10
TPE +K+ D
Sbjct: 1438 TPEVIKYCQD 1447
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 TPEFVKFSMD 10
TPE +K+ D
Sbjct: 1438 TPEVIKYCQD 1447
>sp|UL61_HCMVA|UNCHARACTERIZED protein UL61|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TPEFVKFSM 9
TP F+ F M
Sbjct: 382 TPGFIGFQM 390
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 1 TPEFVK 6
TPE++K
Sbjct: 108 TPEYIK 113
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TPEFVK 6
TPE++K
Sbjct: 108 TPEYIK 113
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 1 TPEFVK 6
TPE++K
Sbjct: 108 TPEYIK 113
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 1 TPEFVK 6
TPE++K
Sbjct: 108 TPEYIK 113
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 1 TPEFVK 6
TPE++K
Sbjct: 108 TPEYIK 113
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PEFVK 6
PEFVK
Sbjct: 1056 PEFVK 1060
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PEFVK 6
PEFVK
Sbjct: 1056 PEFVK 1060
9|Sequence|41|50|KFSMDLTNTE
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 KFSMDL 6
KFS+DL
Sbjct: 516 KFSLDL 521
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 KFSMDLTNT 9
KF+ +TNT
Sbjct: 817 KFAFSITNT 825
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KFSMDLTNT 9
KF+ +TNT
Sbjct: 817 KFAFSITNT 825
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 FSMDLTN 8
F MDLT+
Sbjct: 1069 FGMDLTS 1075
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 FSMDLTN 8
F MDLT+
Sbjct: 1069 FGMDLTS 1075
10|Sequence|46|55|LTNTEITATT
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 1 LTNTEITA 8
+TNTEI +
Sbjct: 109 ITNTEINS 116
11|Sequence|51|60|ITATTSLPSF
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 ITATTSLPSF 10
I ATT+LP F
Sbjct: 1398 IIATTNLPKF 1407
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 1 ITATTSLPSF 10
+ ATT+LP F
Sbjct: 1404 VVATTNLPEF 1413
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 ITATTSLPSF 10
+ ATT+LP F
Sbjct: 1402 VVATTNLPEF 1411
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 ITATTSLPSF 10
+ ATT+LP F
Sbjct: 1404 VVATTNLPEF 1413
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 ITATTSLPSF 10
+ ATT+LP F
Sbjct: 1405 VVATTNLPEF 1414
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 ITATTSLPSF 10
+ ATT+LP F
Sbjct: 1404 VVATTNLPEF 1413
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ITATTSLPSF 10
ITA TS P F
Sbjct: 129 ITAVTSDPEF 138
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 1 ITATTSLPSF 10
ITA TS P F
Sbjct: 129 ITAVTSDPEF 138
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 1 ITATTSLPSF 10
ITA TS P F
Sbjct: 129 ITAVTSDPEF 138
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 ITATTSLPSF 10
+ ATT+LP F
Sbjct: 1221 LIATTNLPDF 1230
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ITATTSLPS 9
ITA S+PS
Sbjct: 759 ITANLSIPS 767
12|Sequence|56|65|SLPSFSTFMD
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 SLPSFSTFMD 10
S PS STF+D
Sbjct: 676 SGPSLSTFLD 685
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 SLPSFSTF 8
SLP+FST
Sbjct: 2172 SLPAFSTL 2179
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2178 TLPAFSTL 2185
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2167 TLPAFSTL 2174
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2188 TLPAFSTL 2195
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2176 TLPAFSTL 2183
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2168 TLPAFSTL 2175
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2168 TLPAFSTL 2175
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2179 TLPAFSTL 2186
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2169 TLPAFSTL 2176
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2170 TLPAFSTL 2177
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2170 TLPAFSTL 2177
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2178 TLPAFSTL 2185
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2181 TLPAFSTL 2188
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2169 TLPAFSTL 2176
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 SLPSFST 7
+LP+FST
Sbjct: 2170 TLPAFST 2176
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 1 SLPSFST 7
S+P+FST
Sbjct: 122 SVPNFST 128
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2186 TLPAFSTL 2193
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 SLPSFSTF 8
+LP+FST
Sbjct: 2180 TLPAFSTL 2187
>sp|NCAP_CVHN1|NUCLEOPROTEIN coronavirus HKU1 (isolate N1)
Query: 1 SLPSFSTFM 9
+LP F T M
Sbjct: 357 TLPGFETIM 365
>sp|BILF1_EBVB9|G-PROTEIN coupled receptor BILF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 SFSTFMD 10
SFS FMD
Sbjct: 285 SFSHFMD 291
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 1 SLPSFSTFM 9
+LP F T M
Sbjct: 357 TLPGFETIM 365
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 1 SLPSFSTFM 9
+LP F T M
Sbjct: 357 TLPGFETIM 365
13|Sequence|61|70|STFMDNYSTG
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 STFMDNYSTG 10
+TFM N+ +G
Sbjct: 1147 TTFMQNFFSG 1156
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 TFMDNYSTG 10
T MD++S+G
Sbjct: 1735 TSMDSWSSG 1743
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 2 TFMDNY 7
TF++NY
Sbjct: 64 TFLNNY 69
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 TFMDNYSTG 10
T MD +S+G
Sbjct: 1735 TCMDRWSSG 1743
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 3 FMDNY 7
+MDNY
Sbjct: 486 YMDNY 490
>sp|UL124_HCMVM|UNCHARACTERIZED protein UL124|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 STFMDNYSTG 10
S+F D Y T
Sbjct: 72 SSFSDTYPTA 81
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 STFMDNY 7
+TF+D Y
Sbjct: 1076 NTFLDKY 1082
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 STFMDNY 7
+TF+D Y
Sbjct: 1076 NTFLDKY 1082
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 STFMDNY 7
+TF+D Y
Sbjct: 1076 NTFLDKY 1082
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 STFMDNYST 9
+TF NY+T
Sbjct: 96 NTFSHNYAT 104
>sp|NSS_BUNL8|NON-STRUCTURAL protein NS-S|Bunyavirus La Crosse (isolate Human/United
Query: 4 MDNYST 9
M NYST
Sbjct: 24 MQNYST 29
14|Sequence|66|75|NYSTGYDVKP
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 NYSTGYDVKP 10
NY YDVKP
Sbjct: 2834 NYHGSYDVKP 2843
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 NYSTGYDVKP 10
NY Y+VKP
Sbjct: 2831 NYHGSYEVKP 2840
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 NYSTGYDVKP 10
NY Y+VKP
Sbjct: 2830 NYHGSYEVKP 2839
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 NYSTGYDVKP 10
NY Y+VKP
Sbjct: 2834 NYHGSYEVKP 2843
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 NYSTGYDVKP 10
NY Y+VKP
Sbjct: 2828 NYHGSYEVKP 2837
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 NYSTGYDVKP 10
NY Y+VKP
Sbjct: 2826 NYHGSYEVKP 2835
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 YSTGYDVKP 10
++TGY +KP
Sbjct: 1982 FATGYLIKP 1990
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 YSTGYDVKP 10
++TGY +KP
Sbjct: 1982 FATGYLIKP 1990
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 2 YSTGYDVK 9
++TGY++K
Sbjct: 158 FATGYNIK 165
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 YSTGYDVKP 10
+ +GY +KP
Sbjct: 1979 FGSGYLIKP 1987
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 2 YSTGYDVK 9
Y+T Y+VK
Sbjct: 892 YTTYYEVK 899
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 NYSTGYDVK 9
NY Y+VK
Sbjct: 2826 NYHGSYEVK 2834
>sp|NSP5_ROTGA|NON-STRUCTURAL protein 5|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 1 NYSTGYD 7
NYS YD
Sbjct: 55 NYSDAYD 61
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 YSTGYDVKP 10
+ +GY +KP
Sbjct: 1979 FGSGYLIKP 1987
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 YSTGYDVKP 10
YST Y KP
Sbjct: 813 YSTNYHYKP 821
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 STGYDVK 9
+TG+DV+
Sbjct: 1727 ATGFDVR 1733
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 2 YSTGYDV 8
+STGY V
Sbjct: 188 WSTGYGV 194
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 NYSTGYDV 8
+YS YDV
Sbjct: 883 SYSNKYDV 890
15|Sequence|71|80|YDVKPPCLYQ
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 5 PPCLYQ 10
PPC+Y+
Sbjct: 197 PPCMYE 202
>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 YDVKPPCLYQ 10
Y V P C YQ
Sbjct: 127 YRVSPRCDYQ 136
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YDVKPPCLYQ 10
YD + CLY+
Sbjct: 140 YDAQEDCLYE 149
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 YDVKPPCLYQ 10
Y V P C YQ
Sbjct: 127 YRVSPRCEYQ 136
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YDVKPPCLYQ 10
YD + CLY+
Sbjct: 139 YDAQEDCLYE 148
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YDVKPPCLYQ 10
YD + CLY+
Sbjct: 140 YDAQEDCLYE 149
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 YDVKPPCLYQ 10
Y V P C YQ
Sbjct: 127 YRVSPRCEYQ 136
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 3 VKPPCLY 9
+KP CLY
Sbjct: 241 IKPYCLY 247
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 3 VKPPCLYQ 10
V+PP L+Q
Sbjct: 206 VRPPALFQ 213
>sp|MATRX_HRSV|MATRIX protein|Human respiratory syncytial virus
Query: 1 YDVKPPC 7
YDV PC
Sbjct: 104 YDVTTPC 110
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 5 PPCLYQ 10
PPCL Q
Sbjct: 37 PPCLRQ 42
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 5 PPCLYQ 10
PPCL Q
Sbjct: 37 PPCLRQ 42
>sp|MATRX_HRSVA|MATRIX protein|Human respiratory syncytial virus A
Query: 1 YDVKPPC 7
YDV PC
Sbjct: 104 YDVTTPC 110
>sp|MATRX_HRSS2|MATRIX protein|Human respiratory syncytial virus A
Query: 1 YDVKPPC 7
YDV PC
Sbjct: 104 YDVTTPC 110
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 5 PPCLYQ 10
PPCL Q
Sbjct: 37 PPCLRQ 42
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain
Query: 5 PPCLYQ 10
PPCL Q
Sbjct: 37 PPCLRQ 42
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V+P C YQ
Sbjct: 129 VRPRCEYQ 136
>sp|MATRX_HRSVB|MATRIX protein|Human respiratory syncytial virus B
Query: 1 YDVKPPC 7
YDV PC
Sbjct: 104 YDVTTPC 110
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 3 VKPPCL 8
V PPC+
Sbjct: 682 VSPPCI 687
Query: 2 DVKPPCLYQ 10
+VK P LY+
Sbjct: 1445 EVKRPLLYK 1453
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 YDVKPPCLY 9
++V P CL+
Sbjct: 826 FNVNPSCLF 834
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 YDVKPPCLY 9
YD P C Y
Sbjct: 248 YDYSPSCSY 256
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 YDVKPPCLY 9
++V P CL+
Sbjct: 826 FNVNPSCLF 834
>sp|VEMP_CVHOC|ENVELOPE small membrane protein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 DVKPPCL 8
DVKPP L
Sbjct: 73 DVKPPVL 79
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 YDVKP 5
YDVKP
Sbjct: 2839 YDVKP 2843
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 2 DVKPPC 7
+ KPPC
Sbjct: 240 EAKPPC 245
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 1 YDVKPPCLY 9
YD P C Y
Sbjct: 248 YDYSPSCSY 256
>sp|3BHS_VACCC|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 YDVKPPCLY 9
YD P C Y
Sbjct: 248 YDYSPSCSY 256
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 2 DVKPPC 7
+++PPC
Sbjct: 89 NIEPPC 94
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 2 DVKPPCL 8
D+K PC+
Sbjct: 35 DLKKPCI 41
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 DVKPPCL 8
D+K PC+
Sbjct: 35 DLKKPCI 41
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 DVKPPCL 8
D+K PC+
Sbjct: 35 DLKKPCI 41
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 DVKPPCL 8
D+K PC+
Sbjct: 35 DLKKPCI 41
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 2 DVKPPCL 8
D+K PC+
Sbjct: 35 DLKKPCI 41
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 DVKPPCL 8
D+K PC+
Sbjct: 35 DLKKPCI 41
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 DVKPPCL 8
D+K PC+
Sbjct: 35 DLKKPCI 41
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 DVKPPCL 8
D+K PC+
Sbjct: 35 DLKKPCI 41
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 VKPPCL 8
+KPPC+
Sbjct: 1286 LKPPCV 1291
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 2 DVKPPCL 8
D+K PC+
Sbjct: 35 DLKKPCI 41
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 VKPPCL 8
++PPCL
Sbjct: 93 LEPPCL 98
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 VKPPCL 8
+KPPC+
Sbjct: 1286 LKPPCV 1291
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 YDVKPP 6
YDV PP
Sbjct: 359 YDVTPP 364
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 VKPPCL 8
++PPCL
Sbjct: 93 LEPPCL 98
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 DVKPPCL 8
D++P CL
Sbjct: 832 DIQPECL 838
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DVKPPCL 8
D++P CL
Sbjct: 833 DIQPECL 839
>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V P C YQ
Sbjct: 129 VSPSCEYQ 136
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 DVKPPCL 8
D++P CL
Sbjct: 833 DIQPECL 839
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 VKPPCLY 9
+KP C+Y
Sbjct: 241 IKPFCMY 247
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 5 PPCL 8
PPCL
Sbjct: 2353 PPCL 2356
>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V P C YQ
Sbjct: 129 VSPSCEYQ 136
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 3 VKPPCLY 9
++P CLY
Sbjct: 254 IQPICLY 260
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 5 PPCL 8
PPCL
Sbjct: 2353 PPCL 2356
>sp|VIF_HV1JR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V P C YQ
Sbjct: 129 VSPRCEYQ 136
>sp|UL110_HCMVA|UNCHARACTERIZED protein UL110|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PPCLYQ 10
PPCL Q
Sbjct: 27 PPCLLQ 32
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 YDVKPPC 7
YD+ P C
Sbjct: 281 YDISPRC 287
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PPCLY 9
PPC Y
Sbjct: 409 PPCPY 413
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PPCLY 9
PPC Y
Sbjct: 409 PPCPY 413
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PPCLY 9
PPC Y
Sbjct: 409 PPCPY 413
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 5 PPCL 8
PPCL
Sbjct: 576 PPCL 579
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 5 PPCL 8
PPCL
Sbjct: 576 PPCL 579
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 DVKPPCLYQ 10
D PPC ++
Sbjct: 1082 DGAPPCTFK 1090
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V P C YQ
Sbjct: 129 VSPRCEYQ 136
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V P C YQ
Sbjct: 129 VSPRCEYQ 136
>sp|M21_HMPVC|PROTEIN M2-1|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 KPPCLYQ 10
K PC Y+
Sbjct: 4 KAPCKYE 10
>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 YDVKPPCLYQ 10
+ V P C YQ
Sbjct: 128 HRVSPRCNYQ 137
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 3 VKPPCLY 9
+KP C+Y
Sbjct: 236 LKPQCVY 242
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V P C YQ
Sbjct: 129 VSPRCEYQ 136
>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V P C YQ
Sbjct: 130 VSPRCNYQ 137
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V P C YQ
Sbjct: 129 VSPRCEYQ 136
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V P C YQ
Sbjct: 129 VSPRCEYQ 136
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V P C YQ
Sbjct: 129 VSPRCEYQ 136
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V P C YQ
Sbjct: 129 VSPRCEYQ 136
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 5 PPCL 8
PPCL
Sbjct: 2436 PPCL 2439
>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V P C YQ
Sbjct: 129 VSPRCEYQ 136
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 YDVKPPCLYQ 10
+ V P C YQ
Sbjct: 127 HRVSPRCEYQ 136
>sp|BLLF2_EBVA8|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 KPPCLYQ 10
KPPCL +
Sbjct: 130 KPPCLSR 136
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V P C YQ
Sbjct: 129 VSPRCEYQ 136
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 5 PPCL 8
PPCL
Sbjct: 2409 PPCL 2412
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VKPPCLYQ 10
V P C YQ
Sbjct: 129 VSPRCEYQ 136
16|Sequence|76|85|PCLYQMPLSG
>sp|REX_HTL1F|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 1 PCLYQMPLSG 10
PCL+Q P SG
Sbjct: 149 PCLFQTPASG 158
>sp|REX_HTL1A|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 1 PCLYQMPLSG 10
PCL+Q P SG
Sbjct: 149 PCLFQTPDSG 158
>sp|REX_HTL1C|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 1 PCLYQMPLSG 10
PCL+Q P SG
Sbjct: 149 PCLFQTPDSG 158
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 PCLYQMPLS 9
P L Q+PLS
Sbjct: 343 PALIQVPLS 351
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 YQMPLSG 10
Y MPLSG
Sbjct: 341 YYMPLSG 347
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 YQMPLSG 10
Y MPLSG
Sbjct: 347 YYMPLSG 353
>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 1 PCLYQMPL 8
PC Y +PL
Sbjct: 213 PCRYTLPL 220
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CLYQMPL 8
CLYQ P+
Sbjct: 264 CLYQSPV 270
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 LYQMPLS 9
LYQ+PL+
Sbjct: 546 LYQVPLA 552
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 CLYQMPL 8
CL Q+PL
Sbjct: 486 CLPQIPL 492
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 3 LYQMPL 8
LYQMP
Sbjct: 346 LYQMPF 351
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CLYQMPLSG 10
CL +M L+G
Sbjct: 892 CLVEMALAG 900
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CLYQMPLSG 10
CL +M L+G
Sbjct: 892 CLVEMALAG 900
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CLYQMPLSG 10
CL +M L+G
Sbjct: 892 CLVEMALAG 900
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 3 LYQMPLS 9
LYQ PL+
Sbjct: 87 LYQKPLN 93
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 PCLYQMPL 8
PC Q PL
Sbjct: 16 PCTGQFPL 23
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CLYQMP 7
CLYQ P
Sbjct: 264 CLYQSP 269
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CLYQMP 7
CLYQ P
Sbjct: 264 CLYQSP 269
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 LYQMPLS 9
+YQ+PL+
Sbjct: 408 MYQIPLN 414
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CLYQMPLSG 10
CLY L+G
Sbjct: 182 CLYTSGLNG 190
17|Sequence|81|90|MPLSGQQSSI
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 MPLSGQQSS 9
+P SG+QSS
Sbjct: 70 LPTSGRQSS 78
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 MPLSGQQSS 9
+P SG+QSS
Sbjct: 70 LPTSGRQSS 78
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 MPLSGQQSS 9
+P SG+QSS
Sbjct: 70 LPTSGRQSS 78
>sp|PG001_MONPV|CHEMOKINE-BINDING protein|Monkeypox virus (MPXV)
Query: 1 MPLSGQQSS 9
MP S QQSS
Sbjct: 17 MPTSLQQSS 25
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 MPLSGQQSS 9
+PL+GQ S+
Sbjct: 793 VPLAGQAST 801
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 MPLSGQQSS 9
+PL+GQ S+
Sbjct: 793 VPLAGQAST 801
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MPLSGQQ 7
+PL GQQ
Sbjct: 610 LPLLGQQ 616
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MPLSGQQ 7
+PL GQQ
Sbjct: 610 LPLLGQQ 616
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 PLSGQQ 7
PL GQQ
Sbjct: 1578 PLEGQQ 1583
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 PLSGQQ 7
PL GQQ
Sbjct: 1578 PLEGQQ 1583
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 PLSGQQS 8
PL GQ+S
Sbjct: 1579 PLEGQRS 1585
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 MPLSGQQSSI 10
+P+SG SS+
Sbjct: 218 LPVSGGTSSV 227
18|Sequence|86|95|QQSSIKVEDI
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 2 QSSIKVEDI 10
QSS+K E+I
Sbjct: 185 QSSMKAEEI 193
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 2 QSSIKVEDI 10
QSS+K E+I
Sbjct: 185 QSSMKAEEI 193
>sp|M2_I81A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I18A0|MATRIX protein 2|Influenza A virus (strain A/Brevig
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I85A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SSIKVED 9
+SIKVED
Sbjct: 65 TSIKVED 71
>sp|M2_I02A1|MATRIX protein 2|Influenza A virus (strain A/Guinea
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 73 QQSAVDVDD 81
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 3 SSIKVED 9
SSIKVE+
Sbjct: 88 SSIKVEE 94
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 3 SSIKVED 9
SSIKVE+
Sbjct: 88 SSIKVEE 94
>sp|M2_I61A1|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 3 SSIKVED 9
SSIKVE+
Sbjct: 88 SSIKVEE 94
>sp|M2_I02A5|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I02A7|MATRIX protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 78 QQSAVDVDD 86
>sp|M2_I02A4|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I02A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I03A0|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I54A1|MATRIX protein 2|Influenza A virus (strain A/Swine/May/1954
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I37A0|MATRIX protein 2|Influenza A virus (strain A/Swine/29/1937
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I01A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 83 QQSAVDVDD 91
>sp|M2_I00A0|MATRIX protein 2|Influenza A virus (strain A/Duck/Hong
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I85A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I03A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I05A1|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 2 QSSIKVED 9
+SSI VED
Sbjct: 64 KSSISVED 71
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 2 QSSIKVED 9
+SSI VED
Sbjct: 64 KSSISVED 71
>sp|M2_I88A7|MATRIX protein 2|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I01A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I88A5|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I82A7|MATRIX protein 2|Influenza A virus (strain A/Swine/Hong
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I78A3|MATRIX protein 2|Influenza A virus (strain A/Mallard/New
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I77A9|MATRIX protein 2|Influenza A virus (strain A/Equine/New
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I01A0|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I80A2|MATRIX protein 2|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I02A6|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
>sp|M2_I96A0|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 QQSSIKVED 9
QQS++ V+D
Sbjct: 80 QQSAVDVDD 88
19|Sequence|91|100|KVEDIQMHNY
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 2 VEDIQMHNY 10
V D+QM NY
Sbjct: 342 VLDVQMRNY 350
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 2 VEDIQMHNY 10
V D+QM NY
Sbjct: 342 VLDVQMRNY 350
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 2 VEDIQMHNY 10
V D+QM NY
Sbjct: 342 VLDVQMRNY 350
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 2 VEDIQMHNY 10
V D+QM NY
Sbjct: 342 VLDVQMRNY 350
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 2 VEDIQMHNY 10
V D+QM NY
Sbjct: 342 VLDVQMRNY 350
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 DIQMHNY 10
DIQ+H Y
Sbjct: 169 DIQLHFY 175
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 1 KVEDIQMHNY 10
+ EDI+ H Y
Sbjct: 495 RTEDIRYHTY 504
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 VEDIQMH 8
VE+I MH
Sbjct: 497 VEEIDMH 503
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 VEDIQMH 8
VE+I MH
Sbjct: 497 VEEIDMH 503
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 KVEDIQMHN 9
K+E+IQ N
Sbjct: 103 KIEEIQNKN 111
>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41
Query: 3 EDIQMHN 9
E+I +HN
Sbjct: 36 EEISLHN 42
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 KVEDIQMHN 9
K+E+IQ N
Sbjct: 103 KIEEIQNKN 111
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 KVEDIQMHN 9
K+E+IQ N
Sbjct: 103 KIEEIQNKN 111
20|Sequence|96|105|QMHNYQQHSH
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QMHNYQQH 8
++HNY QH
Sbjct: 620 EIHNYTQH 627
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 HNYQQHS 9
HN+QQ S
Sbjct: 342 HNFQQFS 348
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 QMHNYQQHS 9
Q NY QH+
Sbjct: 26 QAPNYTQHT 34
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 QMHNYQQ 7
++H+YQQ
Sbjct: 1226 RLHHYQQ 1232
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 HNYQQ 7
HNY+Q
Sbjct: 1028 HNYRQ 1032
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 HNYQQ 7
HNY+Q
Sbjct: 1028 HNYRQ 1032
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 HNYQQ 7
HNY+Q
Sbjct: 1028 HNYRQ 1032
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 HNYQQ 7
HNY+Q
Sbjct: 1028 HNYRQ 1032
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 HNYQQ 7
HNY+Q
Sbjct: 1028 HNYRQ 1032
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 QMHNYQQ 7
++HNY Q
Sbjct: 454 RLHNYSQ 460
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QMHNYQQ 7
++HNY Q
Sbjct: 454 RLHNYSQ 460
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 HNYQQ 7
HNY+Q
Sbjct: 66 HNYEQ 70
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 QMHNYQ 6
Q HNY+
Sbjct: 939 QTHNYE 944
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 QMHNYQ 6
Q HNY+
Sbjct: 939 QTHNYE 944
21|Sequence|101|110|QQHSHLPPQS
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 2 QHSHLPP 8
QH+ LPP
Sbjct: 621 QHAALPP 627
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 QQHSHLPP 8
+ HS +PP
Sbjct: 2393 ESHSSMPP 2400
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 2 QHSHLPPQ 9
QH LPP+
Sbjct: 369 QHPPLPPR 376
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 2 QHSHLPPQ 9
QH LPP+
Sbjct: 369 QHPPLPPR 376
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 4 SHLPPQ 9
+H PPQ
Sbjct: 554 AHCPPQ 559
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 HSHLP 7
HSH+P
Sbjct: 82 HSHIP 86
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 HSHLP 7
HSH+P
Sbjct: 82 HSHIP 86
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 QHSHLP 7
QH+H P
Sbjct: 1026 QHNHRP 1031
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 QHSHLP 7
QH+H P
Sbjct: 1026 QHNHRP 1031
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 QHSHLP 7
QH+H P
Sbjct: 1026 QHNHRP 1031
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 QHSHLP 7
QH+H P
Sbjct: 1026 QHNHRP 1031
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 QQHSHLPPQ 9
+ HS+L PQ
Sbjct: 1974 KTHSYLDPQ 1982
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 4 SHLPPQ 9
+H PPQ
Sbjct: 554 AHCPPQ 559
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 SHLPPQ 9
+HLPPQ
Sbjct: 900 AHLPPQ 905
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 QHSHLPPQS 10
+HS PP +
Sbjct: 471 EHSQTPPAA 479
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 QQHSHLPP 8
Q H H+PP
Sbjct: 709 QLHLHVPP 716
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 SHLPPQS 10
+ LPPQS
Sbjct: 1706 TRLPPQS 1712
>sp|ORF28_HHV8P|PROTEIN ORF28|Human herpesvirus 8 type P
Query: 1 QQHSHLPP 8
Q SH PP
Sbjct: 78 QAGSHAPP 85
>sp|MB43_HHV11|MEMBRANE protein UL43|Human herpesvirus 1 (strain 17)
Query: 2 QHSHLPP 8
Q SH PP
Sbjct: 244 QRSHGPP 250
22|Sequence|106|115|LPPQSEEMMP
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 1 LPPQSEEMMP 10
LPP SE+ +P
Sbjct: 20 LPPPSEDSVP 29
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 QSEEMMP 10
QSE+M P
Sbjct: 299 QSEDMFP 305
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LPPQSEEM 8
LPP +EE+
Sbjct: 60 LPPNNEEI 67
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 1 LPPQSEEM 8
LPP +EE+
Sbjct: 60 LPPNNEEI 67
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 LPPQSEE 7
LPP SEE
Sbjct: 743 LPPPSEE 749
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 LPPQSEE 7
LPP SEE
Sbjct: 743 LPPPSEE 749
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 LPPQSEE 7
LPP++EE
Sbjct: 272 LPPKNEE 278
23|Sequence|111|120|EEMMPHSGSV
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 EMMPHSGS 9
E +PHSG+
Sbjct: 479 EQLPHSGN 486
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 EMMPHSGS 9
E +PHSG+
Sbjct: 479 EQLPHSGN 486
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 EMMPHSGS 9
E +PHSG+
Sbjct: 479 EQLPHSGN 486
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 EMMPH 6
E+MPH
Sbjct: 4163 ELMPH 4167
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 EMMPH 6
E+MPH
Sbjct: 4183 ELMPH 4187
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 EMMPH 6
E+MPH
Sbjct: 4213 ELMPH 4217
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 EMMPH 6
E+MPH
Sbjct: 4163 ELMPH 4167
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 EMMPH 6
E+MPH
Sbjct: 4183 ELMPH 4187
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 EMMPH 6
E+MPH
Sbjct: 4213 ELMPH 4217
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 EMMPH 6
EM+PH
Sbjct: 566 EMLPH 570
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 2 EMMPH 6
EM+PH
Sbjct: 566 EMLPH 570
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 EMMPH 6
+MMPH
Sbjct: 529 DMMPH 533
24|Sequence|116|125|HSGSVYYKPS
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 5 VYYKPS 10
VYYKPS
Sbjct: 2661 VYYKPS 2666
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HSG-SVYYKPS 10
HSG V+YKP+
Sbjct: 2614 HSGVDVFYKPT 2624
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HSG-SVYYKPS 10
HSG V+YKP+
Sbjct: 2614 HSGVDVFYKPT 2624
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HSG-SVYYKPS 10
HSG V+YKP+
Sbjct: 2614 HSGVDVFYKPT 2624
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HSG-SVYYKPS 10
HSG V+YKP+
Sbjct: 2614 HSGVDVFYKPT 2624
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HSG-SVYYKPS 10
HSG V+YKP+
Sbjct: 2614 HSGVDVFYKPT 2624
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 HSGSVYYKP 9
HSG +Y+ P
Sbjct: 796 HSGFIYFGP 804
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 SGSVYYKPS 10
SGSV Y PS
Sbjct: 2406 SGSVEYHPS 2414
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 5 VYYKPS 10
V+YKPS
Sbjct: 2661 VFYKPS 2666
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 5 VYYKPS 10
V+YKPS
Sbjct: 2659 VFYKPS 2664
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 5 VYYKPS 10
V+YKPS
Sbjct: 2659 VFYKPS 2664
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 5 VYYKPS 10
V+YKPS
Sbjct: 2659 VFYKPS 2664
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 VYYKPS 10
V+YKPS
Sbjct: 2659 VFYKPS 2664
>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 SGSVYYK 8
+GSVY+K
Sbjct: 113 TGSVYFK 119
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 1 HSGSVYYKPS 10
+ GS+Y PS
Sbjct: 358 YVGSIYVSPS 367
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HSGSVYYKPS 10
+ GS+Y PS
Sbjct: 358 YVGSIYVSPS 367
>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 2 SGSVYYK 8
+GSVY+K
Sbjct: 113 TGSVYFK 119
>sp|VP7_ROTHM|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 SGSVYYK 8
+GSVY+K
Sbjct: 113 TGSVYFK 119
>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 SGSVYYK 8
+GSVY+K
Sbjct: 113 TGSVYFK 119
>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 2 SGSVYYK 8
+GSVY+K
Sbjct: 113 TGSVYFK 119
>sp|VP7_ROTHW|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 SGSVYYK 8
+GSVY+K
Sbjct: 113 TGSVYFK 119
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 SGSVYYK 8
+GSVY+K
Sbjct: 113 TGSVYFK 119
>sp|VP7_ROTHJ|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 SGSVYYK 8
+GSVY+K
Sbjct: 113 TGSVYFK 119
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 SGSVYYK 8
+GSVY+K
Sbjct: 113 TGSVYFK 119
>sp|VP7_ROTHK|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 SGSVYYK 8
+GSVY+K
Sbjct: 113 TGSVYFK 119
>sp|VP7_ROTAD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 SGSVYYK 8
+GSVY+K
Sbjct: 113 TGSVYFK 119
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 SGSVYYKP 9
SG VY KP
Sbjct: 503 SGEVYIKP 510
>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 SGSVYYK 8
+GSVY+K
Sbjct: 113 TGSVYFK 119
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 899 VYYDPS 904
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 902 VYYDPS 907
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 905 VYYDPS 910
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 908 VYYDPS 913
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 899 VYYDPS 904
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 900 VYYDPS 905
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 904 VYYDPS 909
>sp|VP7_ROTH4|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 SGSVYYK 8
+GSVY+K
Sbjct: 113 TGSVYFK 119
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 909 VYYDPS 914
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 904 VYYDPS 909
>sp|VP7_ROTHX|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 SGSVYYK 8
+GSVY+K
Sbjct: 113 TGSVYFK 119
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 906 VYYDPS 911
>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 SGSVYYK 8
+GS+Y+K
Sbjct: 113 TGSIYFK 119
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 SGSVYYK 8
+GS+Y+K
Sbjct: 113 TGSIYFK 119
>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 SGSVYYK 8
+GS+Y+K
Sbjct: 113 TGSIYFK 119
>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 SGSVYYK 8
+GS+Y+K
Sbjct: 113 TGSIYFK 119
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 905 VYYDPS 910
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 904 VYYDPS 909
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 897 VYYDPS 902
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 903 VYYDPS 908
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 904 VYYDPS 909
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 899 VYYDPS 904
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 910 VYYDPS 915
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 903 VYYDPS 908
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 904 VYYDPS 909
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 904 VYYDPS 909
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 916 VYYDPS 921
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 898 VYYDPS 903
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 901 VYYDPS 906
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 916 VYYDPS 921
>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 SGSVYYK 8
+GS+Y+K
Sbjct: 113 TGSIYFK 119
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VYYKPS 10
VYY PS
Sbjct: 916 VYYDPS 921
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 HSGSVYYKPS 10
HS +VY +PS
Sbjct: 390 HSPTVYGRPS 399
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 GSVYYKPS 10
GSVYY S
Sbjct: 2915 GSVYYHNS 2922
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 GSVYYKPS 10
GSVYY S
Sbjct: 2865 GSVYYHNS 2872
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 SGSVYYKP 9
SG VY KP
Sbjct: 512 SGKVYAKP 519
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 SGSVYYKP 9
SG VY KP
Sbjct: 512 SGKVYAKP 519
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 SGSVYYKP 9
SG VY KP
Sbjct: 512 SGKVYAKP 519
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 5 VYYKPS 10
V+Y+PS
Sbjct: 2660 VFYRPS 2665
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 5 VYYKPS 10
V+Y+PS
Sbjct: 2657 VFYRPS 2662
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 5 VYYKPS 10
V+Y+PS
Sbjct: 2660 VFYRPS 2665
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 5 VYYKPS 10
V+YKP+
Sbjct: 2651 VFYKPT 2656
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 5 VYYKPS 10
VY+KP+
Sbjct: 357 VYFKPT 362
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 4 SVYYKPS 10
SVY KPS
Sbjct: 779 SVYRKPS 785
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 GSVYYKPS 10
GSVYY S
Sbjct: 2915 GSVYYHNS 2922
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 5 VYYKPS 10
VY+KP+
Sbjct: 357 VYFKPT 362
>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 3 GSVYYK 8
GSVY+K
Sbjct: 114 GSVYFK 119
>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 GSVYYK 8
GSVY+K
Sbjct: 114 GSVYFK 119
>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 3 GSVYYK 8
GSVY+K
Sbjct: 114 GSVYFK 119
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 GSVYYKPS 10
GSVYY S
Sbjct: 2865 GSVYYHNS 2872
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 4 SVYYKPS 10
SVY KPS
Sbjct: 779 SVYRKPS 785
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 4 SVYYKPS 10
SVY KPS
Sbjct: 779 SVYRKPS 785
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GSVYYKP 9
GS+Y KP
Sbjct: 5040 GSLYVKP 5046
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GSVYYKP 9
GS+Y KP
Sbjct: 5063 GSLYVKP 5069
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HSGSVYYKP 9
++GS YY P
Sbjct: 1189 YTGSGYYYP 1197
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 SVYYKPS 10
S+YY PS
Sbjct: 3047 SMYYPPS 3053
>sp|TRX1_EBVB9|TRIPLEX capsid protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 VYYKPS 10
+YY PS
Sbjct: 295 IYYSPS 300
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 4 SVYYKPS 10
S+YY PS
Sbjct: 3020 SMYYPPS 3026
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 SVYYKPS 10
S+YY PS
Sbjct: 3025 SMYYPPS 3031
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 HSGSVYY 7
HSG +Y+
Sbjct: 798 HSGFIYF 804
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 HSGSVYY 7
HSG +Y+
Sbjct: 798 HSGFIYF 804
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 HSGSVYY 7
HSG +Y+
Sbjct: 798 HSGFIYF 804
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 HSGSVYY 7
HSG +Y+
Sbjct: 798 HSGFIYF 804
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 SGSVYYKP 9
+GS YY P
Sbjct: 1187 TGSSYYYP 1194
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 HSGSVYY 7
HSG +Y+
Sbjct: 798 HSGFIYF 804
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 SGSVYYKP 9
+GS YY P
Sbjct: 1187 TGSSYYYP 1194
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 HSGSVYY 7
HSG +Y+
Sbjct: 795 HSGFIYF 801
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 HSGSVYY 7
HSG +Y+
Sbjct: 795 HSGFIYF 801
25|Sequence|121|130|YYKPSSPPTP
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 YKPSSPPTP 10
Y+PS PPTP
Sbjct: 791 YEPSDPPTP 799
Query: 4 PSSPPTP 10
P SPP P
Sbjct: 472 PKSPPRP 478
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 YKPSSPPTP 10
Y+PS PPTP
Sbjct: 791 YEPSDPPTP 799
Query: 4 PSSPPTP 10
P SPP P
Sbjct: 472 PKSPPRP 478
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 YYKPSSP 7
YYKPS P
Sbjct: 2662 YYKPSEP 2668
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 KPSSPPTP 10
+PS+P TP
Sbjct: 151 RPSAPDTP 158
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 YYKPSSP 7
+YKPS P
Sbjct: 2660 FYKPSEP 2666
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 YYKPSSP 7
+YKPS P
Sbjct: 2660 FYKPSEP 2666
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 YYKPSSP 7
+YKPS P
Sbjct: 2660 FYKPSEP 2666
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 YYKPSSP 7
+YKPS P
Sbjct: 2660 FYKPSEP 2666
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 YKPSSPPT 9
Y+PS PPT
Sbjct: 791 YEPSGPPT 798
Query: 4 PSSPPTP 10
P SPP P
Sbjct: 472 PKSPPRP 478
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 YKPSSPPT 9
Y+PS PPT
Sbjct: 791 YEPSGPPT 798
Query: 4 PSSPPTP 10
P SPP P
Sbjct: 472 PKSPPRP 478
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 YKPSSPPT 9
Y+PS PPT
Sbjct: 791 YEPSGPPT 798
Query: 4 PSSPPTP 10
P SPP P
Sbjct: 472 PKSPPRP 478
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 YKPSSPPT 9
Y+PS PPT
Sbjct: 791 YEPSGPPT 798
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 YKPSSPP 8
+ P SPP
Sbjct: 811 FHPESPP 817
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 4 PSSPP 8
PSSPP
Sbjct: 246 PSSPP 250
>sp|NEC2_HHV2H|NUCLEAR egress protein 2|Human herpesvirus 2 (strain HG52)
Query: 2 YKPSSPPT 9
Y PS+PP+
Sbjct: 41 YSPSNPPS 48
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 YKPSSPPT 9
Y P SP T
Sbjct: 809 YHPESPDT 816
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 5 SSPPT 9
SSPPT
Sbjct: 32 SSPPT 36
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 YYKPSSP 7
YY PSSP
Sbjct: 1415 YYSPSSP 1421
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 YYKPSSP 7
YY PSSP
Sbjct: 1412 YYSPSSP 1418
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 KPSSPPT 9
KP++PP+
Sbjct: 120 KPTAPPS 126
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 2 YKPSSPPTP 10
++PS PTP
Sbjct: 496 FQPSEEPTP 504
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 KPSSPPTP 10
KP S PTP
Sbjct: 1273 KPYSEPTP 1280
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 3 KPSSPPTP 10
+P+SPP P
Sbjct: 597 RPASPPRP 604
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 YYKPSSPPTP 10
+Y+ P TP
Sbjct: 456 HYRNGDPQTP 465
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 YYKPSSPPTP 10
+Y+ P TP
Sbjct: 445 HYRNGDPQTP 454
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 YYKPSSPPTP 10
+Y+ P TP
Sbjct: 445 HYRNGDPQTP 454
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 YYKPSSPPTP 10
+Y+ P TP
Sbjct: 445 HYRNGDPQTP 454
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 YYKPSSPPTP 10
+Y+ P TP
Sbjct: 446 HYRNGDPQTP 455
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 YYKPSSPPTP 10
+Y+ P TP
Sbjct: 446 HYRNGDPQTP 455
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 YYKPSSPPTP 10
+Y+ P TP
Sbjct: 453 HYRNGDPQTP 462
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 1 YYKPSSPPTP 10
+Y+ P TP
Sbjct: 446 HYRNGDPQTP 455
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 YYKPSSPPTP 10
+Y+ P TP
Sbjct: 456 HYRNGDPQTP 465
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 YYKPSSPPTP 10
+Y+ P TP
Sbjct: 456 HYRNGDPQTP 465
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 YYKPSSPPTP 10
+Y+ P TP
Sbjct: 458 HYRNGDPQTP 467
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 YYKPSSPPTP 10
+Y+ P TP
Sbjct: 456 HYRNGDPQTP 465
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 2 YKPSSPPTP 10
++PS PTP
Sbjct: 496 FQPSRDPTP 504
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 YYKPSSPPTP 10
+Y+ P TP
Sbjct: 456 HYRNGDPQTP 465
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 YYKPSSPPTP 10
+Y+ P TP
Sbjct: 462 HYRNGDPQTP 471
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 SSPPTP 10
+SPP+P
Sbjct: 105 TSPPSP 110
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 SSPPTP 10
+SPP+P
Sbjct: 105 TSPPSP 110
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 4 PSSPP 8
PSSPP
Sbjct: 579 PSSPP 583
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YKPSSPPTP 10
++P PTP
Sbjct: 12 FRPEERPTP 20
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YKPSSPPTP 10
++P PTP
Sbjct: 12 FRPEERPTP 20
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 YYKPSSPPT 9
Y++ ++PPT
Sbjct: 1742 YFQNNTPPT 1750
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 6 SPPTP 10
SPPTP
Sbjct: 305 SPPTP 309
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 YYKPSSPPT 9
Y++ ++PPT
Sbjct: 1742 YFQNNTPPT 1750
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PSSPPTP 10
PS PP P
Sbjct: 8 PSGPPLP 14
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PSSPPTP 10
PS PP P
Sbjct: 8 PSGPPLP 14
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 6 SPPTP 10
SPPTP
Sbjct: 305 SPPTP 309
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 PSSPPTP 10
P SPP P
Sbjct: 472 PKSPPRP 478
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 1 YYKPSSPPTP 10
Y K +S PTP
Sbjct: 288 YIKSTSVPTP 297
26|Sequence|126|135|SPPTPTTPGF
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 2 PPTPTTP 8
PP P TP
Sbjct: 1225 PPKPETP 1231
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 3 PTPTTP 8
PTPTTP
Sbjct: 252 PTPTTP 257
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SPPTPTT 7
+PPTP T
Sbjct: 513 APPTPET 519
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 PPTPTT 7
PP PTT
Sbjct: 315 PPLPTT 320
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 2 PPTPT 6
PPTPT
Sbjct: 725 PPTPT 729
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 2 PPTPT 6
PPTPT
Sbjct: 725 PPTPT 729
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 SPPTPTTPG 9
+PP PT+PG
Sbjct: 42 APPRPTSPG 50
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka
Query: 2 PPTPTTP 8
PP TTP
Sbjct: 28 PPESTTP 34
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 2 PPTPTTP 8
PP TTP
Sbjct: 28 PPESTTP 34
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 SPPTPTTPG 9
S P PTTPG
Sbjct: 1065 STPEPTTPG 1073
>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 PTPTTPG 9
P P+ PG
Sbjct: 162 PIPSVPG 168
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 PPTPTTPGF 10
PP+PT F
Sbjct: 624 PPSPTPADF 632
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SPPTP 5
+PPTP
Sbjct: 513 APPTP 517
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 3 PTPTTPG 9
P+P PG
Sbjct: 501 PSPDVPG 507
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 2 PPTPTTPG 9
P T TPG
Sbjct: 410 PQTTETPG 417
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PPTPTTPG 9
P T TPG
Sbjct: 410 PQTTETPG 417
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 2 PPTPTTP 8
PPTPT P
Sbjct: 439 PPTPTDP 445
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PTPTTPG 9
P+P PG
Sbjct: 442 PSPEVPG 448
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 SPPTP 5
SPPTP
Sbjct: 305 SPPTP 309
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PTPTTPG 9
P P TPG
Sbjct: 444 PRPGTPG 450
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 SPPTPTTP 8
SP TP+TP
Sbjct: 132 SPSTPSTP 139
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 3 PTPTTP 8
PTP TP
Sbjct: 423 PTPDTP 428
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 PPTPTTPG 9
PPTP P
Sbjct: 772 PPTPAEPA 779
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 PPTPTTP 8
PP PTTP
Sbjct: 2379 PPDPTTP 2385
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 SPPTP 5
SPPTP
Sbjct: 305 SPPTP 309
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 TPTTPGF 10
TP++P F
Sbjct: 455 TPSSPSF 461
>sp|US32_HCMVM|PROTEIN US32|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SPPTPTTPGF 10
+PP PG+
Sbjct: 128 TPPPRNLPGY 137
>sp|US32_HCMVA|UNCHARACTERIZED protein HHRF7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SPPTPTTPGF 10
+PP PG+
Sbjct: 128 TPPPRNLPGY 137
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 SPPTPTT 7
+PP P+T
Sbjct: 272 TPPNPST 278
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 3 PTPTTP 8
PTPTTP
Sbjct: 314 PTPTTP 319
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 PTPTTP 8
PTPTTP
Sbjct: 314 PTPTTP 319
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 PTPTTP 8
PTPTTP
Sbjct: 314 PTPTTP 319
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 3 PTPTTP 8
PT TTP
Sbjct: 165 PTATTP 170
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 TPTTPG 9
TP++PG
Sbjct: 528 TPSSPG 533
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 TPTTPG 9
TP++PG
Sbjct: 528 TPSSPG 533
27|Sequence|131|140|TTPGFQVQHS
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 3 PGFQVQHS 10
P F+V+HS
Sbjct: 220 PYFKVEHS 227
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 TPGFQVQHS 10
TP Q +HS
Sbjct: 1748 TPAVQREHS 1756
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PGFQVQHS 10
PG+ + HS
Sbjct: 75 PGYALHHS 82
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 PGFQVQHS 10
PG+ + HS
Sbjct: 75 PGYALHHS 82
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 GFQVQH 9
GF++QH
Sbjct: 226 GFELQH 231
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 GFQVQH 9
GF++QH
Sbjct: 226 GFELQH 231
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 GFQVQH 9
GF++QH
Sbjct: 226 GFELQH 231
>sp|GN_HHV8P|ENVELOPE glycoprotein N|Human herpesvirus 8 type P
Query: 1 TTPGF 5
TTPGF
Sbjct: 54 TTPGF 58
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PGFQVQH 9
PG V+H
Sbjct: 440 PGLSVEH 446
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PGFQVQH 9
PG V+H
Sbjct: 440 PGLSVEH 446
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PGFQVQH 9
PG +V+H
Sbjct: 859 PGIKVKH 865
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 TPGFQVQ 8
TPG Q++
Sbjct: 243 TPGMQIR 249
28|Sequence|136|145|QVQHSPMWDD
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 VQHSPMWDD 10
+ H P WDD
Sbjct: 259 ITHQPTWDD 267
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 VQHSPMWDD 10
+ H P WDD
Sbjct: 259 ITHQPTWDD 267
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 VQHSPMWDD 10
+ H P WDD
Sbjct: 259 ITHQPTWDD 267
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 4 HSPMWDD 10
H+P WD+
Sbjct: 1156 HAPRWDN 1162
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 4 HSPMWDD 10
H+P WD+
Sbjct: 1156 HAPCWDN 1162
>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 VQHSPMWDD 10
+ H P WDD
Sbjct: 259 ITHQPTWDD 267
>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 VQHSPMWDD 10
+ H P WDD
Sbjct: 259 ITHQPTWDD 267
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 QVQHSPMW 8
Q+Q SP W
Sbjct: 2033 QIQRSPYW 2040
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 QVQHSPMW 8
Q+Q SP W
Sbjct: 2033 QIQRSPYW 2040
>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 VQHSPMWDD 10
+ H P WDD
Sbjct: 259 ITHQPTWDD 267
>sp|B1_HHV6Z|PROTEIN B1|Human herpesvirus 6B (strain Z29)
Query: 1 QVQHSPMW 8
+V+H+P W
Sbjct: 56 EVRHAPTW 63
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 VQHSPMW 8
+QH P+W
Sbjct: 437 IQHVPLW 443
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 VQHSPMW 8
+QH P W
Sbjct: 197 MQHPPSW 203
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 4 HSPMW 8
H+PMW
Sbjct: 411 HTPMW 415
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 VQHSPMW 8
+QH P W
Sbjct: 197 MQHPPSW 203
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 VQHSPMW 8
+QH P W
Sbjct: 197 MQHPPSW 203
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 1 QVQHSPMWDD 10
Q+QH+P + D
Sbjct: 345 QLQHNPNYYD 354
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 1 QVQHSPMWDD 10
Q+QH+P + D
Sbjct: 345 QLQHNPNYYD 354
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 4 HSPMWD 9
HS +WD
Sbjct: 737 HSAVWD 742
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QVQHSP 6
Q+QH+P
Sbjct: 345 QLQHNP 350
>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P
Query: 4 HSPMWD 9
H P WD
Sbjct: 19 HYPSWD 24
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 1 QVQHSP 6
Q+QH+P
Sbjct: 26 QLQHTP 31
29|Sequence|141|150|PMWDDPGSLH
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 PMWDDPGSLH 10
P+WD P S +
Sbjct: 462 PLWDSPESTY 471
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 PMWDDPGSLH 10
P WD P +L+
Sbjct: 462 PQWDTPEALY 471
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 WDDPG 7
W+DPG
Sbjct: 1275 WNDPG 1279
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 WDDPG 7
W+DPG
Sbjct: 1275 WNDPG 1279
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PMWDDP 6
P+WD P
Sbjct: 491 PLWDRP 496
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PMWDDP 6
P+WD P
Sbjct: 493 PLWDRP 498
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 5 DPGSLH 10
DPG+LH
Sbjct: 881 DPGNLH 886
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 4 DDPGSLH 10
D+P SLH
Sbjct: 411 DEPDSLH 417
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 PMWDDPG 7
P+W PG
Sbjct: 2288 PIWATPG 2294
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 DDPGSLH 10
D+P SLH
Sbjct: 409 DNPQSLH 415
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 WDDP 6
WDDP
Sbjct: 85 WDDP 88
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 WDDP 6
WDDP
Sbjct: 85 WDDP 88
>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 PMWDDPGSL 9
P W PG L
Sbjct: 11 PTWRIPGRL 19
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 WDDP 6
WDDP
Sbjct: 85 WDDP 88
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 MWDDPGSL 9
+W PG L
Sbjct: 1403 LWQGPGEL 1410
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PMWDDPG 7
P+W PG
Sbjct: 2287 PIWARPG 2293
>sp|VIF_HV2D2|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 PMWDDPGSL 9
P W PG L
Sbjct: 11 PTWRIPGRL 19
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 MWDDPGSL 9
+W PG L
Sbjct: 1403 LWKGPGEL 1410
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 MWDDPGSL 9
+W PG L
Sbjct: 1404 LWKGPGEL 1411
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 MWDDPGSL 9
+W PG L
Sbjct: 1405 LWKGPGEL 1412
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 MWDDPGSL 9
+W PG L
Sbjct: 1402 LWKGPGDL 1409
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 MWDDPGSL 9
+W PG L
Sbjct: 1405 LWKGPGEL 1412
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 MWDDPGSL 9
+W PG L
Sbjct: 1404 LWKGPGEL 1411
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 MWDDPGSL 9
+W PG L
Sbjct: 1403 LWKGPGEL 1410
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 MWDDPGSL 9
+W PG L
Sbjct: 1404 LWKGPGEL 1411
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PMWDDPG 7
P+W PG
Sbjct: 2287 PVWARPG 2293
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 PMWDDPGSL 9
P+W PG +
Sbjct: 11 PIWRVPGRM 19
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 2 MWDDP 6
MWD P
Sbjct: 101 MWDAP 105
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 MWDDPGSL 9
+W PG L
Sbjct: 1403 LWKGPGEL 1410
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 MWDDPGSL 9
+W PG L
Sbjct: 1402 LWKGPGEL 1409
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 MWDDPGSL 9
+W PG L
Sbjct: 1404 LWKGPGEL 1411
30|Sequence|146|155|PGSLHNFHQN
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 PGSLHNFHQ 9
PG H HQ
Sbjct: 1593 PGKAHEVHQ 1601
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 PGSLHNFHQ 9
PG H HQ
Sbjct: 1593 PGKAHEVHQ 1601
>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain
Query: 1 PGSLHNFHQ 9
P SLH F Q
Sbjct: 141 PSSLHRFPQ 149
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 PGSLHNFHQ 9
PG H HQ
Sbjct: 1593 PGRAHEVHQ 1601
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 PGSLHNFHQ 9
PG H HQ
Sbjct: 1593 PGRAHEVHQ 1601
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 PGSLHNFHQ 9
PG H HQ
Sbjct: 1593 PGRAHEVHQ 1601
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 PGSLHNFHQ 9
PG H HQ
Sbjct: 1593 PGRAHEVHQ 1601
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 PGSLHNFHQ 9
PG H HQ
Sbjct: 1593 PGRAHETHQ 1601
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 3 SLHNFHQN 10
+LH+FH +
Sbjct: 278 NLHDFHSD 285
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 PGSLHNF 7
P SLH F
Sbjct: 2163 PASLHKF 2169
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 PGSLHNF 7
P SLH F
Sbjct: 2163 PASLHEF 2169
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 PGSLHNF 7
P SLH F
Sbjct: 2163 PASLHEF 2169
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 PGSLHNF 7
P SLH F
Sbjct: 2163 PASLHEF 2169
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 PGSLHNF 7
P SLH F
Sbjct: 2163 PASLHEF 2169
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 PGSLHNFHQ 9
PG +HN +
Sbjct: 367 PGKVHNLME 375
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 4 LHNFHQN 10
+HN+H N
Sbjct: 55 IHNYHFN 61
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GSLHNF 7
GSLH+F
Sbjct: 408 GSLHHF 413
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 PGSLHNFHQ 9
PG +HN +
Sbjct: 367 PGEVHNLME 375
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 2 GSLHNF 7
GSLH+F
Sbjct: 408 GSLHHF 413
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 PGSLHNF 7
PG +HN
Sbjct: 360 PGEVHNL 366
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 PGSLHNFHQ 9
PG +HN +
Sbjct: 370 PGRVHNLME 378
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 PGSLHNFH 8
PG L N H
Sbjct: 273 PGQLVNLH 280
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 PGSLHNFH 8
PG L N H
Sbjct: 273 PGQLVNLH 280
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 PGSLHNF 7
PG +HN
Sbjct: 368 PGKVHNL 374
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 1 PGSLHNFH 8
PG L N H
Sbjct: 273 PGQLVNLH 280
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 3 SLHNFHQN 10
++H+FH +
Sbjct: 278 NIHDFHSD 285
31|Sequence|151|160|NFHQNYVATT
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 NFHQNY 6
NFH NY
Sbjct: 625 NFHSNY 630
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 NFHQNY 6
NFH NY
Sbjct: 621 NFHSNY 626
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 NFHQNY 6
NFH NY
Sbjct: 619 NFHSNY 624
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 NFHQNY 6
NFH NY
Sbjct: 619 NFHSNY 624
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 NFHQNY 6
NFH NY
Sbjct: 619 NFHSNY 624
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 NFHQNY 6
NFH NY
Sbjct: 619 NFHSNY 624
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 NFHQNY 6
NFH NY
Sbjct: 619 NFHSNY 624
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 NFHQNY 6
NFH NY
Sbjct: 608 NFHSNY 613
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 NFHQNY 6
NFH NY
Sbjct: 608 NFHSNY 613
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 NFHQNY 6
NFH NY
Sbjct: 609 NFHSNY 614
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 NFHQNY 6
NFH NY
Sbjct: 608 NFHSNY 613
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 NFHQNY 6
NFH NY
Sbjct: 616 NFHSNY 621
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 1 NFHQNY 6
NFH NY
Sbjct: 609 NFHSNY 614
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 NFHQNY 6
NFH NY
Sbjct: 609 NFHSNY 614
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 1 NFHQNYV 7
NF Q Y+
Sbjct: 111 NFEQKYI 117
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 NFHQNYV 7
NF Q Y+
Sbjct: 111 NFEQKYI 117
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 1 NFHQNYVAT 9
N HQ Y+ T
Sbjct: 681 NKHQQYLKT 689
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 NFHQNYVAT 9
N HQ Y+ T
Sbjct: 681 NKHQQYLKT 689
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 HQNYVAT 9
H+NY A+
Sbjct: 29 HRNYTAS 35
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 HQNYVAT 9
H+NY A+
Sbjct: 29 HRNYTAS 35
32|Sequence|156|165|YVATTHMIEQ
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 ATTHMIE 9
ATTH I+
Sbjct: 448 ATTHAIQ 454
33|Sequence|161|170|HMIEQRKTPV
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 IEQRKTP 9
+EQR+TP
Sbjct: 496 LEQRETP 502
34|Sequence|166|175|RKTPVSRLSL
>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RKTPVSRL 8
R TP+SRL
Sbjct: 532 RLTPLSRL 539
>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RKTPVSRL 8
R TP+SRL
Sbjct: 532 RITPLSRL 539
>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RKTPVSRL 8
R TP+SRL
Sbjct: 532 RLTPLSRL 539
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 RKTPVS 6
RKTPV+
Sbjct: 471 RKTPVA 476
35|Sequence|171|180|SRLSLFSFKQ
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 1 SRLSLFSFK 9
SRL LF+FK
Sbjct: 613 SRLQLFTFK 621
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 SRLSLFSFK 9
SRL++F+FK
Sbjct: 575 SRLTVFTFK 583
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 1 SRLSLFSFK 9
SR+ LF+FK
Sbjct: 594 SRVQLFTFK 602
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 SRLSLFSFK 9
SRL++F FK
Sbjct: 574 SRLTVFEFK 582
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 SRLSLFSF 8
SRL+LF+F
Sbjct: 575 SRLTLFTF 582
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 1 SRLSLFSFKQ 10
SR++ F FKQ
Sbjct: 550 SRITCFEFKQ 559
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 SRLSLFSF 8
SR+SLF F
Sbjct: 574 SRISLFEF 581
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 1 SRLSLFSF 8
SRL++F+F
Sbjct: 583 SRLTVFTF 590
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 SRLSLFSFKQ 10
SR+++F FK
Sbjct: 541 SRIAIFEFKH 550
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 SRLSLFSFK 9
SRL +F FK
Sbjct: 577 SRLVVFHFK 585
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 SRLSLFSF 8
SRL++F F
Sbjct: 574 SRLTVFEF 581
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 5 LFSFKQ 10
LFSFKQ
Sbjct: 90 LFSFKQ 95
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 1 SRLSLFSF 8
SRL++F F
Sbjct: 578 SRLTVFKF 585
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 1 SRLSLFSF 8
SRL +F+F
Sbjct: 592 SRLQVFTF 599
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 1 SRLSLFSFK 9
SR+S+F F+
Sbjct: 562 SRISVFKFE 570
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 LSLFSFK 9
LSLFS++
Sbjct: 752 LSLFSYR 758
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 1 SRLSLFSF 8
SRL +F+F
Sbjct: 591 SRLQVFTF 598
36|Sequence|176|185|FSFKQSPPGT
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 FSFKQSPPGT 10
+S Q PPGT
Sbjct: 5578 YSTLQGPPGT 5587
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 FSFKQSPPGT 10
+S Q PPGT
Sbjct: 5601 YSTLQGPPGT 5610
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 QSPPGT 10
Q PPGT
Sbjct: 5577 QGPPGT 5582
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 QSPPGT 10
Q PPGT
Sbjct: 5615 QGPPGT 5620
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 QSPPGT 10
Q PPGT
Sbjct: 5635 QGPPGT 5640
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 QSPPGT 10
Q PPGT
Sbjct: 5665 QGPPGT 5670
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 3 FKQSPPG 9
F++SPPG
Sbjct: 39 FQESPPG 45
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 QSPPGT 10
Q PPGT
Sbjct: 5591 QGPPGT 5596
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 3 FKQSPPG 9
F++SPPG
Sbjct: 39 FQESPPG 45
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 SFKQSPPG 9
SF Q PPG
Sbjct: 565 SFYQGPPG 572
>sp|TRX1_EBVB9|TRIPLEX capsid protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FSFKQSPP 8
F FKQS P
Sbjct: 111 FQFKQSDP 118
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 FSFKQSPPGT 10
F+F Q+P T
Sbjct: 594 FAFAQTPVDT 603
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 FSFKQSPPG 9
F Q+PPG
Sbjct: 446 FPVAQAPPG 454
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 3 FKQSPPGT 10
FK+ P GT
Sbjct: 274 FKECPAGT 281
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 FSFKQSPPG 9
F Q PPG
Sbjct: 419 FLLAQCPPG 427
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 FKQSPPG 9
FKQ PP
Sbjct: 2278 FKQFPPA 2284
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 KQSPPG 9
KQ PPG
Sbjct: 156 KQPPPG 161
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 KQSPPG 9
KQ PPG
Sbjct: 156 KQPPPG 161
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 QSPPGT 10
Q+PPG+
Sbjct: 1112 QAPPGS 1117
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 FSFKQSPPGT 10
F F SP G+
Sbjct: 124 FQFPSSPTGS 133
37|Sequence|181|190|SPPGTPVSSC
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PPGTPVSSC 10
PP +P+S+C
Sbjct: 1191 PPESPLSTC 1199
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PPGTPVSSC 10
PP +P+S+C
Sbjct: 1191 PPESPLSTC 1199
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 GTPVSSC 10
GTP+++C
Sbjct: 4267 GTPIANC 4273
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 GTPVSSC 10
GTP+++C
Sbjct: 4267 GTPIANC 4273
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPGTPVSS 9
PPG+P S
Sbjct: 48 PPGSPTDS 55
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPGTPVSS 9
PPG+P S
Sbjct: 48 PPGSPTDS 55
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 SPPGTPVSS 9
SPP +P SS
Sbjct: 670 SPPNSPASS 678
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 14 PPSTPVA 20
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 14 PPSTPVA 20
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 14 PPSTPVA 20
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 PPGTPVSS 9
PPGTP SS
Sbjct: 531 PPGTPNSS 538
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 14 PPATPVA 20
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 14 PPSTPVA 20
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 2 PPGTPVSSC 10
PP P+++C
Sbjct: 627 PPKAPLTAC 635
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 14 PPSTPVA 20
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 PPGTPVSSC 10
PPG+ S C
Sbjct: 5254 PPGSGKSHC 5262
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 14 PPSTPVA 20
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 1 SPPGTP 6
+PPG+P
Sbjct: 201 TPPGSP 206
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 PPGTPVSSC 10
PPG+ S C
Sbjct: 5279 PPGSGKSHC 5287
Query: 3 PGTPVSSC 10
P TP+ SC
Sbjct: 1385 PLTPILSC 1392
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 14 PPSTPVA 20
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 1 SPPGTP 6
+PPG+P
Sbjct: 202 TPPGSP 207
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 PGTPVSSC 10
P TP+ SC
Sbjct: 1385 PLTPILSC 1392
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 43 PPSTPVA 49
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 PPGTPV 7
PPG PV
Sbjct: 740 PPGAPV 745
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 14 PPSTPVA 20
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 PPGTPVSS 9
PPG P ++
Sbjct: 1571 PPGKPATN 1578
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 PPGTPV 7
PPG PV
Sbjct: 740 PPGAPV 745
>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5
Query: 1 SPPGTP 6
+PPG+P
Sbjct: 202 TPPGSP 207
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 PPGTPV 7
PPG PV
Sbjct: 714 PPGAPV 719
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 2 PPGTPVSSC 10
PP P+++C
Sbjct: 611 PPKAPLTAC 619
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 2 PPGTPVSSC 10
PP P+++C
Sbjct: 609 PPKVPLTAC 617
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 15 PPSTPVA 21
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 14 PPSTPVA 20
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 14 PPSTPVA 20
>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b
Query: 1 SPPGTP 6
+PPG+P
Sbjct: 202 TPPGSP 207
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 14 PPSTPVA 20
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 SPPGTPVS 8
+PP +PVS
Sbjct: 669 TPPNSPVS 676
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 2 PPGTPVS 8
PP TPV+
Sbjct: 14 PPSTPVA 20
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 PPGTPVSSC 10
PP P++SC
Sbjct: 995 PPTEPLASC 1003
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 PPGTPVSSC 10
PP P++SC
Sbjct: 995 PPTEPLASC 1003
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 PPGTPVSSC 10
PP P++SC
Sbjct: 995 PPTEPLASC 1003
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 PPGTPVSSC 10
PP P++SC
Sbjct: 995 PPTEPLASC 1003
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 1 SPPGTP 6
+PPG+P
Sbjct: 202 TPPGSP 207
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 PPGTPVSSC 10
PP P++SC
Sbjct: 995 PPTEPLASC 1003
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 PPGTPVSSC 10
PP P++SC
Sbjct: 995 PPTEPLASC 1003
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 PPGTPVSSC 10
PP P++SC
Sbjct: 995 PPTEPLASC 1003
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 PPGTPVSSC 10
PP P++SC
Sbjct: 995 PPTEPLASC 1003
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 1 SPPGTP 6
SPPG P
Sbjct: 391 SPPGIP 396
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 1 SPPGTP 6
+PPG+P
Sbjct: 202 TPPGSP 207
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 GTPVSSC 10
G PV+SC
Sbjct: 333 GMPVASC 339
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 SPPGTPVSSC 10
S PG P SC
Sbjct: 2006 SLPGVPFFSC 2015
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 1 SPPGTPVS 8
+PP TPVS
Sbjct: 91 TPPTTPVS 98
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 SPPGTPVSSC 10
S PG+P S C
Sbjct: 612 SVPGSPDSKC 621
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 2 PPGTP 6
PPG P
Sbjct: 15 PPGVP 19
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PPGTP 6
PPGTP
Sbjct: 428 PPGTP 432
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PPGTP 6
PPG P
Sbjct: 15 PPGVP 19
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 2 PPGTP 6
PPG P
Sbjct: 15 PPGVP 19
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 2 PPGTP 6
PPG P
Sbjct: 15 PPGVP 19
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PPGTP 6
PPG P
Sbjct: 15 PPGVP 19
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 SPPGTPVSS 9
SPP +PV +
Sbjct: 402 SPPESPVPA 410
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 1 SPPGTPVSS 9
+PPG P SS
Sbjct: 285 APPGAPRSS 293
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 PPGTPV 7
PPG PV
Sbjct: 725 PPGAPV 730
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 2 PPGTP 6
PPG P
Sbjct: 15 PPGVP 19
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 2 PPGTPVS 8
P GTP++
Sbjct: 401 PQGTPIA 407
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SPPGTPVSS 9
SPP +PV +
Sbjct: 402 SPPESPVPA 410
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 TPVSSC 10
TPVS+C
Sbjct: 427 TPVSNC 432
38|Sequence|186|195|PVSSCQMRFD
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VSSCQMRF 9
V +CQM+F
Sbjct: 351 VLACQMKF 358
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VSSCQMRF 9
V +CQM+F
Sbjct: 351 VLACQMKF 358
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VSSCQMRF 9
V +CQM+F
Sbjct: 351 VLACQMKF 358
>sp|YL13_ADE41|UNCHARACTERIZED 6.9 kDa protein in|Human adenovirus F serotype 41
Query: 1 PVSSCQMRF 9
P++ CQ+R
Sbjct: 49 PIAVCQVRI 57
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 3 SSCQMRF 9
+ CQM+F
Sbjct: 508 APCQMKF 514
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 3 SSCQMRF 9
+ CQM+F
Sbjct: 511 APCQMKF 517
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 3 SSCQMRF 9
+ CQM+F
Sbjct: 509 APCQMKF 515
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 VSSCQMR 8
VSSC +R
Sbjct: 731 VSSCDLR 737
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 VSSCQMR 8
VSSC +R
Sbjct: 731 VSSCDLR 737
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 5 CQMRF 9
CQM+F
Sbjct: 514 CQMKF 518
39|Sequence|191|200|QMRFDGPLHV
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 5 DGPLHV 10
DGPLHV
Sbjct: 409 DGPLHV 414
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 RFDGP 7
RFDGP
Sbjct: 137 RFDGP 141
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 4 FDGPLHV 10
FDG LH
Sbjct: 929 FDGALHA 935
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 4 FDGPLHV 10
FDG LH
Sbjct: 929 FDGALHA 935
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 MRFDGPLHV 10
+ DGPL++
Sbjct: 1818 LSIDGPLYL 1826
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 MRFDGPLHV 10
+ DGPL++
Sbjct: 1818 LSIDGPLYL 1826
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 MRFDGPLHV 10
+ DGPL++
Sbjct: 1818 LSIDGPLYL 1826
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 MRFDGPLHV 10
+ DGPL++
Sbjct: 1818 LSIDGPLYL 1826
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 MRFDGPLHV 10
+ DGPL++
Sbjct: 1818 LSIDGPLYL 1826
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 MRFDGPLHV 10
+ DGPL++
Sbjct: 1818 LSIDGPLYL 1826
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 MRFDGPLHV 10
+ DGPL++
Sbjct: 1818 LSIDGPLYL 1826
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 MRFDGPLHV 10
+ DGPL++
Sbjct: 1819 LSIDGPLYL 1827
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 MRFDGPLHV 10
+ DGPL++
Sbjct: 1818 LSIDGPLYL 1826
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 MRFDGPLHV 10
+ DGPL++
Sbjct: 1818 LSIDGPLYL 1826
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 6 GPLHV 10
GPLHV
Sbjct: 251 GPLHV 255
40|Sequence|196|205|GPLHVPMNPE
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 4 HVPMNPE 10
H P++PE
Sbjct: 126 HTPIHPE 132
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PLHVPMNPE 10
P+HV PE
Sbjct: 73 PIHVRTEPE 81
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LHVPMNPE 10
L VP+NPE
Sbjct: 202 LAVPVNPE 209
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PLHVPMNPE 10
P+HV PE
Sbjct: 73 PIHVRTEPE 81
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 GPLHVPM 7
GPLHV +
Sbjct: 410 GPLHVSI 416
>sp|PG209_MONPV|PROTEIN OPG209|Monkeypox virus (MPXV)
Query: 2 PLHVPMNP 9
PL++P+ P
Sbjct: 20 PLYIPVIP 27
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 GPLHVPMNPE 10
PL + NPE
Sbjct: 770 APLRLKFNPE 779
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GPLHVPMNP 9
G LHVP P
Sbjct: 574 GKLHVPFVP 582
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GPLHVPMNP 9
G LHVP P
Sbjct: 574 GKLHVPFVP 582
>sp|YVEC_VACCC|UNCHARACTERIZED 8.0 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PLHVPMNP 9
PL+V M+P
Sbjct: 28 PLYVIMSP 35
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GPLHVPMNP 9
G LHVP P
Sbjct: 574 GKLHVPFVP 582
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GPLHVPMNP 9
G LHVP P
Sbjct: 573 GKLHVPFVP 581
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 GPLHVPMNP 9
G LHVP P
Sbjct: 572 GKLHVPFVP 580
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 PLHVPMNP 9
P VPM P
Sbjct: 22 PWQVPMQP 29
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 2 PLHVPMN 8
PLH P N
Sbjct: 198 PLHEPAN 204
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 5 VPMNPE 10
VP+NP+
Sbjct: 928 VPINPQ 933
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 5 VPMNPE 10
VP+NP+
Sbjct: 928 VPINPQ 933
>sp|IORF_CVHN1|PROTEIN I|Human coronavirus HKU1 (isolate N1)
Query: 2 PLHVPMNP 9
P H+PM+P
Sbjct: 122 PAHMPMHP 129
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 PLHVPMNP 9
P VPM P
Sbjct: 22 PWRVPMQP 29
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 2 PLHVPMNPE 10
P P+ PE
Sbjct: 225 PTQAPLGPE 233
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GPLHVPMNPE 10
G HV + PE
Sbjct: 2753 GTRHVAVEPE 2762
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GPLHVPMNPE 10
G HV + PE
Sbjct: 2752 GTRHVAVEPE 2761
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GPLHVPMNPE 10
G HV + PE
Sbjct: 2753 GTRHVAVEPE 2762
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 GPLHVPMN 8
GP VPM+
Sbjct: 1831 GPTDVPMS 1838
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 PLHVPMNP 9
P VPM P
Sbjct: 22 PWRVPMQP 29
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 GPLHVPMN 8
GP VPM+
Sbjct: 1829 GPTDVPMS 1836
41|Sequence|201|210|PMNPEPAGSH
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PMNPEPAGS 9
P NP P GS
Sbjct: 254 PQNPVPVGS 262
Query: 1 PMNPEPAGS 9
P P PAG+
Sbjct: 446 PCGPNPAGA 454
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 1 PMNPEPAGS 9
P P PAG+
Sbjct: 3 PFAPVPAGA 11
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PMNPEPAGS 9
P P PAG+
Sbjct: 3 PFAPVPAGA 11
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PMNPEPAGS 9
P +P PAG+
Sbjct: 446 PRDPSPAGA 454
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PMNPEPAGSH 10
P P PAG++
Sbjct: 444 PRGPSPAGAN 453
Query: 1 PMNPEPAGS 9
P NP P G+
Sbjct: 252 PQNPVPVGN 260
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 MNPEPAG 8
++PEPAG
Sbjct: 1717 VHPEPAG 1723
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 PMNPE 5
P+NPE
Sbjct: 1052 PLNPE 1056
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PMNPEPAGS 9
P NP P G+
Sbjct: 255 PQNPVPVGN 263
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 PMNPE 5
P+NPE
Sbjct: 1052 PLNPE 1056
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 PMNPE 5
P+NPE
Sbjct: 1052 PLNPE 1056
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PMNPEPAGS 9
P NP P GS
Sbjct: 254 PQNPVPVGS 262
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PMNPEP 6
P+NPEP
Sbjct: 205 PVNPEP 210
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PMNPEPAGS 9
P NP P G+
Sbjct: 254 PQNPVPVGN 262
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PMNPEPAGS 9
P NP P G+
Sbjct: 249 PQNPVPVGN 257
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 NPEPAGS 9
NP P GS
Sbjct: 15 NPHPKGS 21
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 PMNPEPAG 8
P N EPA
Sbjct: 277 PKNAEPAA 284
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PMNPEPAGS 9
P NP P G+
Sbjct: 254 PQNPVPVGN 262
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 3 NPEPAGS 9
NP P GS
Sbjct: 15 NPHPKGS 21
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 PMNPEPAG 8
P N EP+G
Sbjct: 74 PENHEPSG 81
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 PMNPEPAG 8
P N EP+G
Sbjct: 74 PENHEPSG 81
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 PMNPEPAG 8
P N EP+G
Sbjct: 74 PENHEPSG 81
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 3 NPEPAGS 9
NP P GS
Sbjct: 15 NPHPKGS 21
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PMNPEPAGS 9
P PE AGS
Sbjct: 2382 PTTPEDAGS 2390
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 3 NPEPAGS 9
NP P GS
Sbjct: 15 NPHPKGS 21
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 NPEPAGS 9
NP P GS
Sbjct: 15 NPHPKGS 21
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 PMNPEPAG 8
P N EP+G
Sbjct: 74 PENHEPSG 81
>sp|VE7_HPV6A|PROTEIN E7|Human papillomavirus type 6a
Query: 4 PEPAGSH 10
P+P G H
Sbjct: 18 PDPVGLH 24
>sp|VE7_HPV6B|PROTEIN E7|Human papillomavirus type 6b
Query: 4 PEPAGSH 10
P+P G H
Sbjct: 18 PDPVGLH 24
>sp|VE7_HPV13|PROTEIN E7|Human papillomavirus 13
Query: 2 MNPEPAGSH 10
+ P+P G H
Sbjct: 15 LTPDPVGLH 23
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PMNPEPAGS 9
P NP P G+
Sbjct: 252 PQNPVPVGN 260
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 PMNPEPAGS 9
P NP+P S
Sbjct: 199 PENPKPGMS 207
42|Sequence|206|215|PAGSHHVVDG
>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)
Query: 2 AGSHHVVDG 10
AGSHH + G
Sbjct: 168 AGSHHNIHG 176
>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 AGSHHVVDG 10
AGSHH + G
Sbjct: 168 AGSHHNIHG 176
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 PAGSHH 6
P GSHH
Sbjct: 3230 PFGSHH 3235
Query: 3 GSHHVVD 9
G+H V+D
Sbjct: 1916 GAHRVID 1922
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PAGSHHVVDG 10
P SHH DG
Sbjct: 18 PLRSHHNTDG 27
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PAGSHHVVDG 10
P SHH DG
Sbjct: 18 PLRSHHNTDG 27
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 3 GSHHVVDG 10
G +HV DG
Sbjct: 50 GEYHVCDG 57
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 3 GSHHVVDG 10
G +HV DG
Sbjct: 50 GEYHVCDG 57
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 PAGSHHVV 8
P+G++H++
Sbjct: 34 PSGNYHIL 41
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 PAGSHHVVD 9
P G H +VD
Sbjct: 1563 PRGRHTMVD 1571
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 1 PAGSHHVV 8
P+G++H++
Sbjct: 30 PSGNYHIL 37
>sp|CAHH_VARV|CELL surface-binding protein OPG105|Variola virus
Query: 3 GSHHVVD 9
GS+H++D
Sbjct: 77 GSNHLID 83
>sp|CAHH_VAR67|CELL surface-binding protein OPG105|Variola virus (isolate
Query: 3 GSHHVVD 9
GS+H++D
Sbjct: 77 GSNHLID 83
>sp|CAHH_VACCT|CELL surface-binding protein OPG105|Vaccinia virus (strain Tian Tan)
Query: 3 GSHHVVD 9
GS+H++D
Sbjct: 77 GSNHLID 83
>sp|CAHH_VACCC|CELL surface-binding protein OPG105|Vaccinia virus (strain Copenhagen)
Query: 3 GSHHVVD 9
GS+H++D
Sbjct: 77 GSNHLID 83
>sp|CAHH_VACCA|CELL surface-binding protein OPG105|Vaccinia virus (strain Ankara)
Query: 3 GSHHVVD 9
GS+H++D
Sbjct: 77 GSNHLID 83
>sp|CAHH_MONPZ|CELL surface-binding protein OPG105|Monkeypox virus (strain
Query: 3 GSHHVVD 9
GS+H++D
Sbjct: 77 GSNHLID 83
>sp|CAHH_MONPV|CELL surface-binding protein OPG105|Monkeypox virus (MPXV)
Query: 3 GSHHVVD 9
GS+H++D
Sbjct: 77 GSNHLID 83
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 PAGSHHVVD 9
P G H +VD
Sbjct: 1563 PHGRHTMVD 1571
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 PAGSHHVVDG 10
P S+H VDG
Sbjct: 330 PWLSYHDVDG 339
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 PAGSHHVVDG 10
P S+H VDG
Sbjct: 329 PWLSYHDVDG 338
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 GSHHVVD 9
G+H V+D
Sbjct: 1918 GAHRVID 1924
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 GSHHVVDG 10
G+H ++DG
Sbjct: 2004 GNHSLLDG 2011
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 GSHHVVD 9
G+H V+D
Sbjct: 1916 GAHRVID 1922
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 PAGSHHVVDG 10
P G + V+DG
Sbjct: 1126 PEGLNKVLDG 1135
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 AGSHHVVDG 10
G+H ++DG
Sbjct: 2002 GGNHMLLDG 2010
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 PAGSHHVVD 9
P G H++ +
Sbjct: 471 PEGQHYITE 479
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 PAGSHHV 7
P+GS H+
Sbjct: 261 PSGSRHI 267
43|Sequence|211|220|HVVDGQTFAV
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 1 HVVDGQTFA 9
H + G TFA
Sbjct: 337 HAIRGDTFA 345
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 1 HVVDGQTFA 9
H + G TFA
Sbjct: 337 HAIRGDTFA 345
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 HVVDGQT 7
+V+DGQT
Sbjct: 119 YVLDGQT 125
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 HVVDGQT 7
+V+DGQT
Sbjct: 118 YVLDGQT 124
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 HVVDGQT 7
+V+DGQT
Sbjct: 119 YVLDGQT 125
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 VDGQTFAV 10
V+GQ FA+
Sbjct: 1094 VEGQDFAI 1101
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 2 VVDGQTF 8
VV+GQ+F
Sbjct: 726 VVNGQSF 732
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VVDGQTF 8
VV+GQ+F
Sbjct: 726 VVNGQSF 732
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 HVVDGQTF 8
H+VDG +
Sbjct: 425 HIVDGHGY 432
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 HVVDGQTF 8
H+VDG +
Sbjct: 425 HIVDGHGY 432
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 HVVDGQTF 8
H+VDG +
Sbjct: 424 HIVDGHGY 431
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 HVVDGQTF 8
H+VDG +
Sbjct: 425 HIVDGHGY 432
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 HVVDGQTF 8
H+VDG +
Sbjct: 425 HIVDGHGY 432
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 GQTFAV 10
GQTF+V
Sbjct: 3372 GQTFSV 3377
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 GQTFAV 10
GQTF+V
Sbjct: 3349 GQTFSV 3354
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 GQTFAV 10
GQTF+V
Sbjct: 3372 GQTFSV 3377
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 GQTFAV 10
GQTF+V
Sbjct: 3349 GQTFSV 3354
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 VDGQTFAV 10
VD Q FA+
Sbjct: 46 VDSQPFAI 53
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 VDGQTFAV 10
VD Q FA+
Sbjct: 46 VDSQPFAI 53
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 3 VDGQTFAV 10
VD Q FA+
Sbjct: 46 VDSQPFAI 53
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 VDGQTFAV 10
VD Q FA+
Sbjct: 46 VDSQPFAI 53
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 VDGQTFAV 10
VD Q FA+
Sbjct: 46 VDSQPFAI 53
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 2 VVDGQTFAV 10
V+ G TFA+
Sbjct: 430 VIQGSTFAL 438
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 HVVDGQTF 8
H++DG +
Sbjct: 424 HIIDGHGY 431
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 HVVDGQ 6
HVV GQ
Sbjct: 374 HVVSGQ 379
44|Sequence|216|225|QTFAVPNPIR
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 TFAVPNP 8
TFA+PNP
Sbjct: 324 TFALPNP 330
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 TFAVPNP 8
TFA+PNP
Sbjct: 455 TFALPNP 461
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 TFAVPNP 8
TFA+PNP
Sbjct: 385 TFALPNP 391
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 TFAVPNP 8
TFA+PNP
Sbjct: 460 TFALPNP 466
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 TFAVPNP 8
TFA+PNP
Sbjct: 451 TFALPNP 457
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 TFAVPNP 8
TFA+PNP
Sbjct: 460 TFALPNP 466
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 2 TFAVPNP 8
TF PNP
Sbjct: 586 TFTFPNP 592
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 1 QTFAVPNP 8
Q F PNP
Sbjct: 584 QVFEFPNP 591
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 2 TFAVPNP 8
TF PNP
Sbjct: 586 TFTFPNP 592
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 2 TFAVPNP 8
TF PNP
Sbjct: 586 TFTFPNP 592
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TFAVPNPI 9
TF +P+P+
Sbjct: 181 TFTIPDPV 188
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TFAVPNPI 9
TF +P+P+
Sbjct: 181 TFTIPDPV 188
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 1 QTFAVPN 7
Q+FA PN
Sbjct: 544 QSFAFPN 550
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 3 FAVPNPIR 10
FA+PN R
Sbjct: 391 FAIPNSRR 398
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 3 FAVPNP 8
F++PNP
Sbjct: 79 FSIPNP 84
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TFAVPNPIR 10
T VP P+R
Sbjct: 312 TIVVPEPMR 320
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TFAVPNPIR 10
T VP P+R
Sbjct: 312 TIVVPEPMR 320
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 QTFAVP-NP 8
QTF VP NP
Sbjct: 1306 QTFGVPYNP 1314
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TFAVPNPIR 10
T VP P+R
Sbjct: 312 TIVVPEPMR 320
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 QTFAVP-NP 8
QTF VP NP
Sbjct: 1307 QTFGVPYNP 1315
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 QTFAVP-NP 8
QTF VP NP
Sbjct: 1305 QTFGVPYNP 1313
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 AVPNPI 9
VPNP+
Sbjct: 906 GVPNPV 911
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 4 AVPNPI 9
VPNP+
Sbjct: 906 GVPNPV 911
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 QTFAVP-NP 8
QTF VP NP
Sbjct: 1305 QTFGVPYNP 1313
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 4 AVPNPIR 10
AVP+PI+
Sbjct: 2045 AVPSPIQ 2051
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 QTFAVPNPI 9
Q +VPNP+
Sbjct: 14 QNLSVPNPL 22
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 QTFAVP-NP 8
QTF VP NP
Sbjct: 1306 QTFGVPYNP 1314
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 AVPNPIR 10
AVP+PI+
Sbjct: 2049 AVPSPIQ 2055
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 AVPNPIR 10
AVP+PI+
Sbjct: 2052 AVPSPIQ 2058
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 QTFAVPNPI 9
Q +VPNP+
Sbjct: 14 QNLSVPNPL 22
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 AVPNPIR 10
AVP+PI+
Sbjct: 2072 AVPSPIQ 2078
>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 QTFAVPNPI 9
Q +VPNP+
Sbjct: 14 QNLSVPNPL 22
>sp|HBSAG_HBVF3|LARGE envelope protein|Hepatitis B virus genotype F1
Query: 1 QTFAVPNPI 9
Q +VPNP+
Sbjct: 14 QNLSVPNPL 22
>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H
Query: 1 QTFAVPNPI 9
Q +VPNP+
Sbjct: 14 QNLSVPNPL 22
>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H
Query: 1 QTFAVPNPI 9
Q +VPNP+
Sbjct: 14 QNLSVPNPL 22
>sp|HBSAG_HBVH1|LARGE envelope protein|Hepatitis B virus genotype H
Query: 1 QTFAVPNPI 9
Q +VPNP+
Sbjct: 14 QNLSVPNPL 22
45|Sequence|221|230|PNPIRKPASM
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 NPIRKP 7
NP RKP
Sbjct: 283 NPSRKP 288
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 2 NPIRKPASM 10
+P RK ASM
Sbjct: 364 SPFRKSASM 372
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 2 NPIRKPASM 10
+P RK ASM
Sbjct: 364 SPFRKSASM 372
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 2 NPIRKPASM 10
+P RK ASM
Sbjct: 364 SPFRKSASM 372
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 2 NPIRKPASM 10
+P RK ASM
Sbjct: 364 SPFRKSASM 372
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 2 NPIRKPASM 10
+P RK ASM
Sbjct: 364 SPFRKSASM 372
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 1 PNPIRKP 7
P P RKP
Sbjct: 255 PRPTRKP 261
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 PNPIRKPA 8
P P+R P
Sbjct: 265 PRPLRTPG 272
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 NPIRKPASM 10
NP+ P SM
Sbjct: 1477 NPVLIPVSM 1485
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 PNPIRKPAS 9
PNP R+PA+
Sbjct: 55 PNPDRRPAA 63
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PNPIRKPAS 9
P P+R P+S
Sbjct: 105 PRPLRPPSS 113
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PNPIRKPAS 9
P P+R P+S
Sbjct: 105 PRPLRPPSS 113
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PNPIRKPASM 10
P P R P +M
Sbjct: 575 PGPQRPPEAM 584
46|Sequence|226|235|KPASMGFPGL
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 1 KPASMGFPGL 10
+P S GFP
Sbjct: 201 EPTSAGFPSF 210
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 1 KPASMGFPGL 10
+P S GFP
Sbjct: 201 EPTSAGFPSF 210
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 1 KPASMGFPGL 10
+P S GFP
Sbjct: 201 EPTSAGFPSF 210
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 1 KPASMGFP 8
+P S GFP
Sbjct: 201 EPTSAGFP 208
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 2 PASMGFPGL 10
P+S G PG+
Sbjct: 31 PSSPGTPGV 39
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 2 PASMGFPGL 10
P+S G PG+
Sbjct: 32 PSSPGTPGV 40
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 2 PASMGFPGL 10
P+S G PG+
Sbjct: 32 PSSPGTPGV 40
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 KPASMGFP 8
+PAS FP
Sbjct: 120 RPASFQFP 127
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 2 PASMGFPGL 10
P S G PG+
Sbjct: 32 PTSPGTPGV 40
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 KPASMGFPG 9
KP M F G
Sbjct: 452 KPEEMSFQG 460
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 KPASMGFPG 9
KP M F G
Sbjct: 452 KPEEMSFQG 460
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 1 KPASMGFPG 9
KP M F G
Sbjct: 452 KPEEMSFQG 460
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 4 SMGFPG 9
++GFPG
Sbjct: 320 TVGFPG 325
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 4 SMGFPG 9
++GFPG
Sbjct: 320 TVGFPG 325
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 1 KPASMGFPG 9
KP M F G
Sbjct: 452 KPEEMSFQG 460
47|Sequence|231|240|GFPGLQIGHA
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 GFPGLQIGHA 10
G+ LQ+GHA
Sbjct: 395 GYNPLQVGHA 404
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 GFPGLQIGHA 10
G+ LQ+GHA
Sbjct: 395 GYNPLQVGHA 404
>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1
Query: 1 GFPGLQIGH 9
GFP Q GH
Sbjct: 90 GFPCNQFGH 98
>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PGLQIG 8
PG+Q+G
Sbjct: 49 PGVQVG 54
>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PGLQIG 8
PG+Q+G
Sbjct: 49 PGVQVG 54
>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PGLQIG 8
PG+Q+G
Sbjct: 49 PGVQVG 54
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 1 GFPGLQIG 8
G P LQ+G
Sbjct: 63 GIPPLQLG 70
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 3 PGLQIGHA 10
PG Q+G+
Sbjct: 270 PGAQVGNG 277
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 GFPGLQIGH 9
G P + GH
Sbjct: 1247 GIPEMNFGH 1255
48|Sequence|236|245|QIGHASQLLD
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 1 QIGHASQ 7
Q GH+SQ
Sbjct: 334 QFGHSSQ 340
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 2 IGHASQL 8
+ HASQL
Sbjct: 563 VAHASQL 569
49|Sequence|241|250|SQLLDTQVPS
>sp|LF3_EBVG|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SQLLDTQVP 9
S++L+T+VP
Sbjct: 905 SEILETRVP 913
>sp|LF3_EBVB9|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SQLLDTQVP 9
S++L+T+VP
Sbjct: 905 SEILETRVP 913
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 2 QLLDTQVPS 10
+L DT++PS
Sbjct: 224 ELQDTELPS 232
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 QLLDTQVPS 10
QLLD Q P+
Sbjct: 1623 QLLDVQGPN 1631
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SQLLDT 6
SQLLDT
Sbjct: 504 SQLLDT 509
>sp|PHOSP_PI4HA|PHOSPHOPROTEIN parainfluenza 4a virus (strain
Query: 5 DTQVPS 10
DTQ+PS
Sbjct: 106 DTQLPS 111
50|Sequence|246|255|TQVPSPPSRG
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 TQVPSPPSR 9
T PSPP+R
Sbjct: 29 TWRPSPPTR 37
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 3 VPSPPSRG 10
VPS P RG
Sbjct: 247 VPSKPERG 254
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VPSPPSRG 10
VPS P RG
Sbjct: 247 VPSKPERG 254
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 VPSPPSRG 10
VPSPP G
Sbjct: 1482 VPSPPPMG 1489
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 VPSPPSRG 10
VPSPP G
Sbjct: 1482 VPSPPPMG 1489
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 VPSPPSRG 10
VPSPP G
Sbjct: 1482 VPSPPPMG 1489
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 4 PSPPSR 9
PSPP R
Sbjct: 49 PSPPPR 54
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 PSPPSR 9
PSPP R
Sbjct: 49 PSPPPR 54
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 VPSPPSRG 10
VPSPP G
Sbjct: 1482 VPSPPPVG 1489
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 VPSPPSRG 10
VPSPP G
Sbjct: 1482 VPSPPPVG 1489
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 VPSPPSRG 10
VPSPP G
Sbjct: 1482 VPSPPPVG 1489
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 VPSPPSRG 10
VPSPP G
Sbjct: 1482 VPSPPPVG 1489
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 VPSPPSRG 10
VPSPP G
Sbjct: 1072 VPSPPPVG 1079
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 TQVPSPPS 8
T +P PPS
Sbjct: 1768 TLIPGPPS 1775
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TQVPSPPS 8
T PSPP+
Sbjct: 120 TATPSPPN 127
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 TQVPSPPSR 9
T+ PSPPS+
Sbjct: 1772 TRAPSPPSQ 1780
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 1 TQVPSPP 7
TQ PSPP
Sbjct: 287 TQTPSPP 293
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VPSPP 7
VPSPP
Sbjct: 1480 VPSPP 1484
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VPSPP 7
VPSPP
Sbjct: 1480 VPSPP 1484
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 4 PSPPSRG 10
P PP RG
Sbjct: 497 PGPPDRG 503
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VPSPP 7
VPSPP
Sbjct: 1480 VPSPP 1484
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VPSPP 7
VPSPP
Sbjct: 1480 VPSPP 1484
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VPSPP 7
VPSPP
Sbjct: 1480 VPSPP 1484
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 4 PSPPSRG 10
P PP RG
Sbjct: 497 PGPPDRG 503
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 VPSPPSRG 10
PSPP+R
Sbjct: 353 TPSPPTRN 360
>sp|PHOSP_CHAV|PHOSPHOPROTEIN virus (strain I653514) (CHPV)
Query: 1 TQVPSPPS 8
T++P PP+
Sbjct: 71 TEIPDPPT 78
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 VPSPPSRG 10
VPS SRG
Sbjct: 131 VPSTSSRG 138
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VPSPPSRG 10
VPS SRG
Sbjct: 131 VPSTSSRG 138
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 VPSPPSRG 10
VPS SRG
Sbjct: 131 VPSTSSRG 138
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 2 QVPSPPSRG 10
+ PSP +RG
Sbjct: 466 EAPSPRARG 474
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TQVPSPPSRG 10
TQV PP G
Sbjct: 867 TQVFDPPVTG 876
>sp|YVAT_VACCC|UNCHARACTERIZED 8.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 VPSPPSRG 10
+P+PP G
Sbjct: 23 IPTPPPTG 30
>sp|PHOSP_RABVH|PHOSPHOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 4 PSPPSR 9
P+PP R
Sbjct: 134 PNPPGR 139
51|Sequence|251|260|PPSRGSPSNE
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 PPSRGSPSNE 10
PPS G+P+ E
Sbjct: 776 PPSGGAPTRE 785
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 1 PPSRGSPSN 9
PPS G PS+
Sbjct: 75 PPSLGKPSH 83
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 PPSRGSPSN 9
PPS G PS+
Sbjct: 75 PPSLGKPSH 83
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 PPSRGSPSNE 10
PP RG P E
Sbjct: 1815 PPGRGDPFPE 1824
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 PPSRGSPSNE 10
PP RG P E
Sbjct: 1815 PPGRGDPFPE 1824
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 RGSPSNE 10
RG P+NE
Sbjct: 727 RGQPANE 733
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 1 PPSRGSPSN 9
PPS G P++
Sbjct: 75 PPSLGKPAH 83
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 1 PPSRGSPSN 9
PPS G P++
Sbjct: 75 PPSLGKPAH 83
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PPSRGSPSN 9
PPS G P++
Sbjct: 75 PPSLGKPAH 83
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PPSRGSPSN 9
PPS G P++
Sbjct: 75 PPSLGKPAH 83
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 RGSPSNE 10
RG P+NE
Sbjct: 730 RGQPANE 736
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 RGSPSNE 10
RG P+NE
Sbjct: 726 RGQPANE 732
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 RGSPSNE 10
RG P+NE
Sbjct: 725 RGQPANE 731
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 RGSPSNE 10
RG P+NE
Sbjct: 729 RGQPANE 735
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 RGSPSNE 10
RG P+NE
Sbjct: 717 RGQPANE 723
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 2 PSRGSPSN 9
P RG+P N
Sbjct: 363 PQRGAPRN 370
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 RGSPSNE 10
RG P+NE
Sbjct: 718 RGQPANE 724
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 PSRGSPSN 9
P+RG P N
Sbjct: 10 PTRGGPRN 17
>sp|DUT_ORFN2|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Orf virus (strain NZ2) (OV
Query: 2 PSRGSP 7
P+RGSP
Sbjct: 21 PARGSP 26
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 PPSRGSPSN 9
PP G P N
Sbjct: 466 PPGAGVPKN 474
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PSRGSPSN 9
PSRG P++
Sbjct: 185 PSRGHPNH 192
52|Sequence|256|265|SPSNEGLCAV
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PSNEGLCAV 10
P NEG+ AV
Sbjct: 1347 PLNEGIMAV 1355
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PSNEGLCAV 10
P NEG+ AV
Sbjct: 1347 PLNEGIMAV 1355
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PSNEGLCAV 10
P NEG+ AV
Sbjct: 1347 PLNEGIMAV 1355
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PSNEGLCAV 10
P NEG+ AV
Sbjct: 1347 PLNEGIMAV 1355
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PSNEGLCAV 10
P NEG+ AV
Sbjct: 1347 PLNEGIMAV 1355
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PSNEGLCAV 10
P NEG+ AV
Sbjct: 1348 PLNEGIMAV 1356
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PSNEGLCAV 10
P NEG+ AV
Sbjct: 1347 PLNEGIMAV 1355
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PSNEGLCAV 10
P NEG+ AV
Sbjct: 1346 PLNEGVMAV 1354
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PSNEGLCAV 10
P NEG+ AV
Sbjct: 1346 PLNEGVMAV 1354
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PSNEGLCAV 10
P NEG+ AV
Sbjct: 1346 PLNEGVMAV 1354
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PSNEGLCAV 10
P NEG+ AV
Sbjct: 1346 PLNEGVMAV 1354
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PSNEGLCAV 10
P NEG+ AV
Sbjct: 1346 PLNEGVMAV 1354
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PSNEGLCAV 10
P NEG+ A+
Sbjct: 1348 PLNEGIMAI 1356
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 SNEGLCA 9
SNE LCA
Sbjct: 1574 SNEQLCA 1580
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 SNEGLCA 9
SNE LCA
Sbjct: 1574 SNEQLCA 1580
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 PSNEGLCAV 10
PS EG C +
Sbjct: 3095 PSREGGCVM 3103
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 PSNEGLCAV 10
P EG+C V
Sbjct: 580 PFPEGVCVV 588
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SPSNEGLCA 9
+PS+EG+ A
Sbjct: 453 APSHEGIQA 461
>sp|UL24_HHV7J|PROTEIN UL24 homolog|Human herpesvirus 7 (strain JI)
Query: 4 NEGLCAV 10
NE LC V
Sbjct: 132 NESLCKV 138
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 NEGLC 8
N+GLC
Sbjct: 486 NQGLC 490
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 SPSNEGL 7
+PSN+G+
Sbjct: 85 NPSNDGV 91
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 NEGLC 8
N+GLC
Sbjct: 486 NQGLC 490
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 SPSNEGLCAV 10
+P +EG C V
Sbjct: 2412 APPSEGECEV 2421
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 SPSNEGLCAV 10
+P +EG C V
Sbjct: 2412 APPSEGECEV 2421
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 4 NEGLCA 9
NE LCA
Sbjct: 43 NEALCA 48
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 4 NEGLCA 9
NE LCA
Sbjct: 43 NEALCA 48
53|Sequence|261|270|GLCAVCGDNA
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GLCAVCG 7
GLC VCG
Sbjct: 4973 GLCVVCG 4979
Query: 5 VCGDN 9
VCGDN
Sbjct: 5663 VCGDN 5667
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GLCAVCG 7
GLC VCG
Sbjct: 4998 GLCVVCG 5004
Query: 2 LCAVCG 7
+C VCG
Sbjct: 4048 VCKVCG 4053
>sp|GLYC_HRSVB|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 3 CAVCGDN 9
C++CG+N
Sbjct: 173 CSICGNN 179
>sp|GLYC_HRSV8|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 3 CAVCGDN 9
C++CG+N
Sbjct: 173 CSICGNN 179
>sp|GLYC_HRSV1|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 3 CAVCGDN 9
C++CG+N
Sbjct: 173 CSICGNN 179
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GLCAVCG 7
GLC CG
Sbjct: 470 GLCEACG 476
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GLCAVCG 7
GLC CG
Sbjct: 470 GLCEACG 476
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 2 LCAVCGD 8
+CAVC D
Sbjct: 125 VCAVCTD 131
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 LCAVCGDNA 10
+CA CG +A
Sbjct: 1050 VCAQCGADA 1058
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 2 LCAVCGD 8
+CAVC D
Sbjct: 115 VCAVCTD 121
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 3 CAVCGD 8
CA CGD
Sbjct: 19 CADCGD 24
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 CAVCGD 8
CA CGD
Sbjct: 351 CADCGD 356
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 CAVCGD 8
CA CGD
Sbjct: 351 CADCGD 356
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 LCAVCGDNA 10
+CA CG +A
Sbjct: 1054 VCAHCGADA 1062
Query: 2 LCAVCGDNA 10
LC CG +
Sbjct: 1081 LCPACGQTS 1089
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 CAVCGD 8
CA CGD
Sbjct: 353 CADCGD 358
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 3 CAVCGDN 9
C VCG N
Sbjct: 363 CRVCGIN 369
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 3 CAVCGDN 9
C VCG N
Sbjct: 363 CRVCGIN 369
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 3 CAVCGDN 9
C VCG N
Sbjct: 363 CRVCGIN 369
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 3 CAVCGDN 9
C VCG N
Sbjct: 363 CRVCGIN 369
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 3 CAVCGDN 9
C VCG N
Sbjct: 363 CRVCGIN 369
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 CAVCGD 8
CA CGD
Sbjct: 353 CADCGD 358
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 AVCGDNA 10
AVC DN+
Sbjct: 121 AVCDDNS 127
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 4 AVCGDNA 10
AVC DN+
Sbjct: 121 AVCDDNS 127
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 5 VCGDNA 10
VC DNA
Sbjct: 2084 VCSDNA 2089
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 2 LCAVCGD 8
LC VC D
Sbjct: 258 LCLVCHD 264
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 2 LCAVCGDN 9
LC VC N
Sbjct: 169 LCTVCSVN 176
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 LCAVCGDNA 10
+C+ CG +A
Sbjct: 923 VCSYCGADA 931
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 2 LCAVCGDNA 10
+ VCG+N+
Sbjct: 402 IAVVCGNNS 410
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LCAVCGDNA 10
+ VCG+N+
Sbjct: 401 IAVVCGNNS 409
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LCAVCG 7
+C VCG
Sbjct: 4369 VCTVCG 4374
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 VCGDNA 10
+CGDN+
Sbjct: 5285 LCGDNS 5290
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 LCAVCG 7
+C VCG
Sbjct: 4369 VCTVCG 4374
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 LCAVCGDN 9
LC + GDN
Sbjct: 77 LCDLVGDN 84
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 4 AVCGDNA 10
A+C DN+
Sbjct: 113 AICDDNS 119
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LCAVCG 7
+C VCG
Sbjct: 4346 VCTVCG 4351
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 GLCAVCG 7
G C+ CG
Sbjct: 605 GFCSDCG 611
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 LCAVCGDN 9
LC + GDN
Sbjct: 77 LCDLVGDN 84
>sp|VE6_HPV58|PROTEIN E6|Human papillomavirus 58
Query: 1 GLCAVC 6
G CAVC
Sbjct: 134 GRCAVC 139
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 AVCGD 8
AVCGD
Sbjct: 541 AVCGD 545
Query: 2 LCAVCG 7
+C VCG
Sbjct: 4385 VCQVCG 4390
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 LCAVCG 7
+C VCG
Sbjct: 4346 VCTVCG 4351
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 LCAVCGDN 9
LC + GDN
Sbjct: 77 LCDLVGDN 84
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 AVCGD 8
AVCGD
Sbjct: 541 AVCGD 545
Query: 2 LCAVCG 7
+C VCG
Sbjct: 4385 VCQVCG 4390
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 AVCGD 8
AVCGD
Sbjct: 541 AVCGD 545
Query: 2 LCAVCG 7
+C VCG
Sbjct: 4435 VCQVCG 4440
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 AVCGD 8
AVCGD
Sbjct: 541 AVCGD 545
Query: 2 LCAVCG 7
+C VCG
Sbjct: 4405 VCQVCG 4410
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 AVCGD 8
AVCGD
Sbjct: 541 AVCGD 545
Query: 2 LCAVCG 7
+C VCG
Sbjct: 4435 VCQVCG 4440
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 AVCGD 8
AVCGD
Sbjct: 541 AVCGD 545
Query: 2 LCAVCG 7
+C VCG
Sbjct: 4405 VCQVCG 4410
>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)
Query: 2 LCAVCGDNA 10
LCA+C A
Sbjct: 147 LCALCEKQA 155
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 LCAVCGDNA 10
LC V GD +
Sbjct: 1699 LCLVVGDGS 1707
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 LCAVCGDNA 10
LC V GD +
Sbjct: 1699 LCLVVGDGS 1707
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 LCAVCGDNA 10
LC V GD +
Sbjct: 1699 LCLVVGDGS 1707
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 LCAVCGDNA 10
LC V GD +
Sbjct: 1699 LCLVVGDGS 1707
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 LCAVCGDNA 10
LC V GD +
Sbjct: 1699 LCLVVGDGS 1707
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 LCAVCGDNA 10
LC V GD +
Sbjct: 1699 LCLVVGDGS 1707
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 LCAVCGDNA 10
LC V GD +
Sbjct: 1699 LCLVVGDGS 1707
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 LCAVCGDNA 10
LC V GD +
Sbjct: 1700 LCLVVGDGS 1708
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 GLCAVCG 7
LC CG
Sbjct: 47 ALCKTCG 53
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 GLCAVCG 7
LC CG
Sbjct: 47 ALCKTCG 53
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GLCAVCG 7
LC CG
Sbjct: 47 ALCKTCG 53
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GLCAVCG 7
LC CG
Sbjct: 47 ALCKTCG 53
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 GLCAVCG 7
LC CG
Sbjct: 47 ALCKTCG 53
>sp|M1_INBYA|MATRIX protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 2 LCAVCGDNA 10
LCA+C A
Sbjct: 147 LCALCEKQA 155
>sp|M1_INBSI|MATRIX protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 LCAVCGDNA 10
LCA+C A
Sbjct: 147 LCALCEKQA 155
>sp|M1_INBMP|MATRIX protein 1|Influenza B virus (strain B/Memphis/12/1997)
Query: 2 LCAVCGDNA 10
LCA+C A
Sbjct: 147 LCALCEKQA 155
>sp|M1_INBAD|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 2 LCAVCGDNA 10
LCA+C A
Sbjct: 147 LCALCEKQA 155
>sp|M1_INBAC|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 2 LCAVCGDNA 10
LCA+C A
Sbjct: 147 LCALCEKQA 155
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 6 CGDNA 10
CGDN
Sbjct: 140 CGDNG 144
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GLCAVCGDNA 10
G C +CG N
Sbjct: 79 GNCELCGWNG 88
>sp|PG166_MONPV|PROTEIN OPG166|Monkeypox virus (MPXV)
Query: 6 CGDN 9
CGDN
Sbjct: 99 CGDN 102
>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 6 CGDN 9
CGDN
Sbjct: 15 CGDN 18
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 LCAVCGDNA 10
LC V GD +
Sbjct: 1699 LCLVIGDGS 1707
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 LCAVCGDNA 10
LC V GD +
Sbjct: 1699 LCLVIGDGS 1707
>sp|UL135_HCMVT|PROTEIN UL135|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 GLCAVCGDN 9
G CA C N
Sbjct: 53 GACACCYRN 61
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 GLCAVCG 7
G CA CG
Sbjct: 337 GWCADCG 343
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 GLCAVCG 7
G C CG
Sbjct: 2476 GRCQACG 2482
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 GLCAVCG 7
G C CG
Sbjct: 605 GFCTDCG 611
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 LCAVCG 7
+C VCG
Sbjct: 4048 VCKVCG 4053
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 CAVCGDNA 10
C VC D A
Sbjct: 225 CIVCIDRA 232
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 CAVCGDNA 10
C VC D A
Sbjct: 225 CIVCIDRA 232
54|Sequence|266|275|CGDNAACQHY
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 DNAACQHY 10
D A CQHY
Sbjct: 533 DMAGCQHY 540
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 DNAACQHY 10
D A CQHY
Sbjct: 533 DMAGCQHY 540
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 DNAACQHY 10
D A CQHY
Sbjct: 533 DMAGCQHY 540
>sp|NSS_PUUMG|NON-STRUCTURAL protein NS-S|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 DNAACQHY 10
DN CQH+
Sbjct: 34 DNKQCQHW 41
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CGDNAACQ 8
CGD AAC+
Sbjct: 821 CGDYAACK 828
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 CGDNAA 6
CGDN+A
Sbjct: 5286 CGDNSA 5291
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CGDNAACQH 9
C D+ C+H
Sbjct: 110 CMDSKTCEH 118
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 CGDNAACQH 9
CG CQH
Sbjct: 987 CGGILRCQH 995
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 CGDNAACQH 9
CG CQH
Sbjct: 987 CGGILRCQH 995
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 CGDNAACQH 9
CG CQH
Sbjct: 988 CGGILRCQH 996
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 CGDNAACQH 9
CG CQH
Sbjct: 988 CGGILRCQH 996
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 CGDNAACQH 9
CG CQH
Sbjct: 972 CGGILRCQH 980
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 CGDNAACQH 9
CG CQH
Sbjct: 972 CGGILRCQH 980
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 CGDNAACQH 9
CG CQH
Sbjct: 972 CGGILRCQH 980
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 CGDNAACQH 9
CG CQH
Sbjct: 972 CGGILRCQH 980
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 CGDNAACQH 9
CG CQH
Sbjct: 972 CGGILRCQH 980
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 4 NAACQHY 10
NAAC+++
Sbjct: 1382 NAACENF 1388
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 4 NAACQHY 10
NAAC+++
Sbjct: 1381 NAACENF 1387
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 4 NAACQHY 10
NAAC+++
Sbjct: 1381 NAACENF 1387
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 CGDNAACQH 9
CG C+H
Sbjct: 972 CGGKLLCKH 980
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 CGDNAACQH 9
CG C+H
Sbjct: 956 CGGKLLCKH 964
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 CGDNAACQH 9
CG C+H
Sbjct: 959 CGGKLLCKH 967
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 CGDNAACQH 9
CG C+H
Sbjct: 951 CGGKLLCKH 959
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 CGDNAACQH 9
CG C+H
Sbjct: 963 CGGKLLCRH 971
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 CGDNAACQH 9
CG C+H
Sbjct: 963 CGGKLLCRH 971
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CGDNAAC 7
CG++A C
Sbjct: 5776 CGNSATC 5782
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 6 ACQHY 10
AC+HY
Sbjct: 299 ACEHY 303
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 6 ACQHY 10
AC+HY
Sbjct: 299 ACEHY 303
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 AACQHY 10
A C+HY
Sbjct: 65 AYCRHY 70
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 AACQHY 10
A C+HY
Sbjct: 65 AYCRHY 70
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 AACQHY 10
A C+HY
Sbjct: 65 AYCRHY 70
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 CGDNAACQHY 10
CG +C+ Y
Sbjct: 274 CGTIVSCEGY 283
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 1 CGDNAACQ 8
CG + CQ
Sbjct: 178 CGPKSFCQ 185
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CGDNAACQ 8
CG + CQ
Sbjct: 178 CGPKSFCQ 185
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 1 CGDNAACQ 8
CG + CQ
Sbjct: 178 CGPKSFCQ 185
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 5 AACQHY 10
A C+HY
Sbjct: 407 AMCKHY 412
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 2 GDNAACQH 9
GD C H
Sbjct: 215 GDTFVCNH 222
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 ACQHY 10
AC HY
Sbjct: 280 ACPHY 284
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 ACQHY 10
AC HY
Sbjct: 280 ACPHY 284
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 CGDNAACQH 9
CG C+H
Sbjct: 977 CGGILRCEH 985
>sp|PRO_ADE04|PROTEASE adenovirus E serotype 4
Query: 1 CGDNAAC 7
CG +AAC
Sbjct: 121 CGFSAAC 127
55|Sequence|271|280|ACQHYGVRTC
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 CQHYGVR 8
C+H+GVR
Sbjct: 240 CKHWGVR 246
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 CQHYGVR 8
C+H+GVR
Sbjct: 240 CKHWGVR 246
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 CQHYGVR 8
C+H+GVR
Sbjct: 240 CKHWGVR 246
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 CQHYGVR 8
C+H+GVR
Sbjct: 240 CKHWGVR 246
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 CQHYGVR 8
C+H+GVR
Sbjct: 240 CKHWGVR 246
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 CQHYGVR 8
C+H+GVR
Sbjct: 240 CKHWGVR 246
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 2 CQHYGVR 8
C+H+GVR
Sbjct: 240 CKHWGVR 246
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CQHYGV 7
C+HYGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CQHYGV 7
C+HYGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CQHYGV 7
C+HYGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CQHYGV 7
C+HYGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CQHYGV 7
C+HYGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CQHYGV 7
C+HYGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CQHYGV 7
C+HYGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CQHYGV 7
C+HYGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CQHYGV 7
C+HYGV
Sbjct: 1248 CKHYGV 1253
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CQHYGVR 8
C+HYG R
Sbjct: 67 CRHYGPR 73
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CQHYGVR 8
C+HYG R
Sbjct: 67 CRHYGPR 73
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CQHYGVR 8
C+HYG R
Sbjct: 67 CRHYGPR 73
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CQHYGVRTC 10
C HY +R C
Sbjct: 486 CWHYALRPC 494
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 QHYGVR 8
+HYGVR
Sbjct: 834 KHYGVR 839
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 487 CWHYAPRPC 495
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 4 HYGVR 8
HYGVR
Sbjct: 6 HYGVR 10
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 3 QHYGVRTC 10
QH+ +R C
Sbjct: 377 QHHALRPC 384
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 487 CWHYAPRPC 495
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 487 CWHYAPRPC 495
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 486 CWHYAPRPC 494
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 487 CWHYAPRPC 495
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 486 CWHYAPRPC 494
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 486 CWHYAPRPC 494
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 486 CWHYAPRPC 494
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 487 CWHYAPRPC 495
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 486 CWHYAPRPC 494
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 486 CWHYAPRPC 494
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 487 CWHYAPRPC 495
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 486 CWHYAPRPC 494
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ACQHY 5
CQHY
Sbjct: 536 GCQHY 540
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ACQHY 5
CQHY
Sbjct: 536 GCQHY 540
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ACQHY 5
CQHY
Sbjct: 536 GCQHY 540
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 488 CWHYPPRPC 496
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 487 CWHYAPRPC 495
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 487 CWHYAPRPC 495
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 488 CWHYPPRPC 496
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 488 CWHYPPRPC 496
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 487 CWHYAPREC 495
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 486 CWHYAPRQC 494
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 488 CWHYPPRPC 496
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 487 CWHYPPRPC 495
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 487 CWHYPPRPC 495
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 486 CWHYPPRPC 494
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 486 CWHYPPRPC 494
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 486 CWHYPPRPC 494
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ACQHYGV 7
AC HY V
Sbjct: 280 ACPHYAV 286
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ACQHYGV 7
AC HY V
Sbjct: 280 ACPHYAV 286
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 CQHYGVRTC 10
C HY R C
Sbjct: 488 CWHYPPRQC 496
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 3 QHYGV 7
QHYGV
Sbjct: 274 QHYGV 278
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 HYGVRTC 10
H GV TC
Sbjct: 77 HVGVITC 83
>sp|VE7_HPV11|PROTEIN E7|Human papillomavirus 11
Query: 3 QHYGVRTC 10
QHY + TC
Sbjct: 50 QHYQILTC 57
56|Sequence|276|285|GVRTCEGCKG
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 VRTCEGCKG 10
+R+C C+G
Sbjct: 1197 LRSCHACRG 1205
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 RTCEGCK 9
R C GCK
Sbjct: 954 RACAGCK 960
>sp|VLTF3_VARV|VIRAL late gene transcription factor|Variola virus
Query: 2 VRTCEGCK 9
+R C GC+
Sbjct: 3 LRLCSGCR 10
>sp|VLTF3_VAR67|VIRAL late gene transcription factor|Variola virus (isolate
Query: 2 VRTCEGCK 9
+R C GC+
Sbjct: 3 LRLCSGCR 10
>sp|VLTF3_VACCC|VIRAL late gene transcription factor|Vaccinia virus (strain Copenhagen)
Query: 2 VRTCEGCK 9
+R C GC+
Sbjct: 3 LRLCSGCR 10
>sp|VLTF3_VACCA|VIRAL late gene transcription factor|Vaccinia virus (strain Ankara)
Query: 2 VRTCEGCK 9
+R C GC+
Sbjct: 3 LRLCSGCR 10
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 RTCEGCK 9
R C GC+
Sbjct: 956 RACAGCR 962
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 RTCEGCK 9
R C GC+
Sbjct: 956 RACAGCR 962
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 RTCEGCK 9
R C GC+
Sbjct: 956 RACAGCR 962
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 RTCEGCK 9
R C GC+
Sbjct: 956 RACAGCR 962
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 RTCEGCK 9
R C GC+
Sbjct: 956 RACAGCR 962
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 RTCEGCK 9
R CE C+
Sbjct: 820 RACESCQ 826
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RTCEGCK 9
R CE C+
Sbjct: 820 RACESCQ 826
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 RTCEGCK 9
R CE C+
Sbjct: 820 RACESCQ 826
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 VRTCEGCK 9
+R C+GC+
Sbjct: 1031 LRGCQGCE 1038
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 GVRTCEGCKG 10
G+R + CKG
Sbjct: 972 GIRARKQCKG 981
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 GVRTCEGCKG 10
G+R + CKG
Sbjct: 972 GIRARKQCKG 981
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 3 RTCEGC 8
+ CEGC
Sbjct: 116 KGCEGC 121
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 RTCEGCK 9
R C+GC+
Sbjct: 1032 RGCQGCE 1038
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 RTCEGCK 9
R C+GC+
Sbjct: 1032 RGCQGCE 1038
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 RTCEGCK 9
R C+GC+
Sbjct: 1032 RGCQGCE 1038
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 RTCEGCK 9
R C+GC+
Sbjct: 1032 RGCQGCE 1038
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 RTCEGCK 9
R C+GC+
Sbjct: 1032 RGCQGCE 1038
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 RTCEGCK 9
R C+GC+
Sbjct: 1032 RGCQGCE 1038
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 RTCEGCK 9
R C+GC+
Sbjct: 1032 RGCQGCE 1038
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 RTCEGCK 9
R C+GC+
Sbjct: 1032 RGCQGCE 1038
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 3 RTCEGCK 9
R C GC+
Sbjct: 970 RACVGCR 976
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2608 GVRVCE 2613
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2608 GVRVCE 2613
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 VRTCEGCK 9
+R+C C+
Sbjct: 1197 LRSCHACR 1204
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 VRTCEGCK 9
+R+C C+
Sbjct: 1197 LRSCHACR 1204
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2598 GVRVCE 2603
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2608 GVRVCE 2613
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 RTCEGC 8
R C GC
Sbjct: 971 RACAGC 976
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2596 GVRVCE 2601
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 RTCEGC 8
R C GC
Sbjct: 971 RACAGC 976
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2591 GVRVCE 2596
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2608 GVRVCE 2613
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2590 GVRVCE 2595
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2585 GVRVCE 2590
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2596 GVRVCE 2601
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2585 GVRVCE 2590
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2585 GVRVCE 2590
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2612 GVRVCE 2617
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2588 GVRVCE 2593
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2593 GVRVCE 2598
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2585 GVRVCE 2590
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2585 GVRVCE 2590
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2608 GVRVCE 2613
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2585 GVRVCE 2590
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2589 GVRVCE 2594
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2589 GVRVCE 2594
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2586 GVRVCE 2591
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2585 GVRVCE 2590
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2586 GVRVCE 2591
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2594 GVRVCE 2599
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CEGCKG 10
CE C G
Sbjct: 472 CEACGG 477
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CEGCKG 10
CE C G
Sbjct: 472 CEACGG 477
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2586 GVRVCE 2591
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2594 GVRICE 2599
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2586 GVRVCE 2591
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GVRTCE 6
GVR CE
Sbjct: 2586 GVRVCE 2591
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 3 RTCEGCK 9
+TCE C+
Sbjct: 597 QTCEFCQ 603
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 RTCEGCK 9
+TCE C+
Sbjct: 597 QTCEFCQ 603
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 3 RTCEGCK 9
+TCE C+
Sbjct: 597 QTCEFCQ 603
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 1 GVRTCEGCK 9
VRT GC+
Sbjct: 222 AVRTWPGCE 230
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 5 CEGCKG 10
CE C+G
Sbjct: 464 CEFCEG 469
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 5 CEGCKG 10
C GC G
Sbjct: 29 CNGCVG 34
>sp|EV45_HHV2H|ENVELOPE protein UL45|Human herpesvirus 2 (strain HG52)
Query: 1 GVRTC 5
G+RTC
Sbjct: 123 GIRTC 127
57|Sequence|281|290|EGCKGFFKRT
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 EGCKGFFK 8
EGC G+F+
Sbjct: 12 EGCTGWFE 19
Query: 1 EGCKGFFKRT 10
E K FF RT
Sbjct: 603 ENWKSFFSRT 612
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 1 EGCKGFF 7
EGC G+F
Sbjct: 14 EGCSGWF 20
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 2 GCKGFF 7
GC GFF
Sbjct: 1141 GCCGFF 1146
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 EGCKGFFKRT 10
E K FF RT
Sbjct: 600 ENWKSFFSRT 609
Query: 2 GCKGFFK 8
GC G+F+
Sbjct: 13 GCTGWFE 19
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 EGCKGFFKRT 10
E K FF RT
Sbjct: 600 ENWKSFFSRT 609
Query: 2 GCKGFFK 8
GC G+F+
Sbjct: 13 GCTGWFE 19
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 4 KGFFKRT 10
K FFKR+
Sbjct: 593 KSFFKRS 599
Query: 2 GCKGFF 7
GC G+F
Sbjct: 13 GCNGWF 18
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 EGCKGFFKRT 10
E K FF+R+
Sbjct: 606 ENWKSFFRRS 615
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 4 KGFFKR 9
KGFF R
Sbjct: 190 KGFFNR 195
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 4 KGFFKR 9
KGFF R
Sbjct: 190 KGFFNR 195
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 4 KGFFKR 9
KGFF R
Sbjct: 190 KGFFNR 195
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 5 GFFKRT 10
GF++RT
Sbjct: 504 GFYRRT 509
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 KGFFK 8
KGFFK
Sbjct: 4818 KGFFK 4822
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 KGFFK 8
KGFFK
Sbjct: 4795 KGFFK 4799
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 KGFFK 8
KGFFK
Sbjct: 4804 KGFFK 4808
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 2 GCKGFF 7
GC G+F
Sbjct: 13 GCNGWF 18
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 2 GCKGFF 7
GC G+F
Sbjct: 14 GCNGWF 19
Query: 4 KGFFKRT 10
K FF RT
Sbjct: 596 KSFFSRT 602
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 2 GCKGFF 7
GC G+F
Sbjct: 14 GCNGWF 19
Query: 4 KGFFKRT 10
K FF RT
Sbjct: 610 KSFFSRT 616
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 GCKGFF 7
GC G+F
Sbjct: 13 GCSGWF 18
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 2 GCKGFF 7
GC G+F
Sbjct: 12 GCSGWF 17
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 2 GCKGFF 7
GC G+F
Sbjct: 13 GCNGWF 18
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 2 GCKGFF 7
GC G+F
Sbjct: 12 GCSGWF 17
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 4 KGFFKR 9
K FFKR
Sbjct: 568 KSFFKR 573
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 4 KGFFKR 9
K FFKR
Sbjct: 566 KSFFKR 571
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 1 EGCKGFFKRT 10
E K FF+R+
Sbjct: 606 ENWKSFFQRS 615
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 2 GCKGFF 7
GC G+F
Sbjct: 11 GCSGWF 16
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 2 GCKGFF 7
GC G+F
Sbjct: 12 GCNGWF 17
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 GCKGFF 7
GC G+F
Sbjct: 13 GCNGWF 18
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 2 GCKGFF 7
GC G+F
Sbjct: 13 GCSGWF 18
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 2 GCKGFF 7
GC G+F
Sbjct: 13 GCSGWF 18
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 2 GCKGFF 7
GC G+F
Sbjct: 13 GCTGWF 18
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 2 GCKGFF 7
GC G+F
Sbjct: 13 GCTGWF 18
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 2 GCKGFF 7
GC G+F
Sbjct: 13 GCTGWF 18
>sp|ORF2P_POL1M|ORF2P protein|Poliovirus type 1 (strain Mahoney)
Query: 2 GCKGFFKRT 10
GC GF +
Sbjct: 54 GCSGFITES 62
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 2 GCKGFF 7
GC G+F
Sbjct: 12 GCTGWF 17
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 2 GCKGFF 7
GC G+F
Sbjct: 12 GCTGWF 17
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 2 GCKGFF 7
GC G+F
Sbjct: 13 GCNGWF 18
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 2 GCKGFF 7
GC G+F
Sbjct: 13 GCTGWF 18
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 2 GCKGFF 7
GC G+F
Sbjct: 13 GCNGWF 18
Query: 4 KGFFKRT 10
K FF RT
Sbjct: 590 KSFFSRT 596
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 2 GCKGFF 7
GC G+F
Sbjct: 13 GCNGWF 18
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 1 EGCKGFF 7
+GC G F
Sbjct: 526 DGCLGMF 532
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 EGCKGFF 7
+GC G F
Sbjct: 526 DGCLGMF 532
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 1 EGCKGFF 7
+GC G F
Sbjct: 526 DGCLGMF 532
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 1 EGCKGFF 7
+GC G F
Sbjct: 526 DGCLGMF 532
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 1 EGCKGFF 7
+GC G F
Sbjct: 526 DGCLGMF 532
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 EGCKGFF 7
+GC G F
Sbjct: 526 DGCLGMF 532
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 1 EGCKGFF 7
+GC G F
Sbjct: 526 DGCLGMF 532
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 1 EGCKGFF 7
+GC G F
Sbjct: 526 DGCLGMF 532
58|Sequence|286|295|FFKRTVQKNA
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 FFKRTVQKNA 10
FFKR +KNA
Sbjct: 915 FFKRASRKNA 924
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 FFKRTVQKNA 10
FF+R +NA
Sbjct: 894 FFERKASRNA 903
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 FKRTVQK 8
FKRTV K
Sbjct: 6090 FKRTVAK 6096
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 1 FFKRTVQK 8
FF++T+Q+
Sbjct: 251 FFRQTLQQ 258
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 FFKRTVQK 8
FF++T+Q+
Sbjct: 248 FFRQTLQQ 255
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 1 FFKRTVQK 8
FF++T+Q+
Sbjct: 248 FFRQTLQQ 255
59|Sequence|291|300|VQKNAKYVCL
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 NAKYVCL 10
NAK VC+
Sbjct: 542 NAKMVCM 548
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 VQKNAKYV 8
V KN KY+
Sbjct: 641 VDKNGKYI 648
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 KNAKYVCL 10
KNA +CL
Sbjct: 848 KNASKLCL 855
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 KNAKYVCL 10
KNA +CL
Sbjct: 848 KNASKLCL 855
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 KNAKYVCL 10
KNA +CL
Sbjct: 852 KNASKLCL 859
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 1 VQKNAKYVCL 10
V+KN + +CL
Sbjct: 324 VKKNKRELCL 333
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VQKNAKYVCL 10
V+KN + +CL
Sbjct: 324 VKKNKREMCL 333
>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)
Query: 1 VQKNAKYVC 9
+ NA+Y C
Sbjct: 24 TKANARYTC 32
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 VQKNAKYVCL 10
+QK +CL
Sbjct: 1871 IQKGKSVICL 1880
60|Sequence|296|305|KYVCLANKNC
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CLANKNC 10
CL +KNC
Sbjct: 109 CLPDKNC 115
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 1 KYVCLANKN 9
K +C+ NKN
Sbjct: 111 KAICIENKN 119
>sp|REV_HV2BE|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 KYVCLANKNC 10
+ V LANK C
Sbjct: 49 RLVALANKLC 58
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 YVCLAN 7
Y+CL+N
Sbjct: 1998 YLCLSN 2003
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 YVCLAN 7
Y+CL+N
Sbjct: 1998 YLCLSN 2003
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 YVCLAN 7
Y+CL+N
Sbjct: 1999 YLCLSN 2004
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 4 CLANKNC 10
C+ KNC
Sbjct: 1810 CIVYKNC 1816
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 4 CLANKNC 10
C+ KNC
Sbjct: 1810 CIVYKNC 1816
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 YVCLAN 7
Y+CL+N
Sbjct: 1999 YLCLSN 2004
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 4 CLANKNC 10
C+ KNC
Sbjct: 1810 CIVYKNC 1816
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 YVCLANKN 9
Y+C + KN
Sbjct: 1800 YICESEKN 1807
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 YVCLANKN 9
Y+C + KN
Sbjct: 1800 YICESEKN 1807
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 YVCLANKN 9
Y+C + KN
Sbjct: 1800 YICESEKN 1807
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 YVCLANKN 9
Y+C + KN
Sbjct: 1800 YICESEKN 1807
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 YVCLANKN 9
Y+C + KN
Sbjct: 1800 YICESEKN 1807
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 3 VCLAN 7
VCLAN
Sbjct: 50 VCLAN 54
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VCLAN 7
VCLAN
Sbjct: 50 VCLAN 54
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 VCLAN 7
VCLAN
Sbjct: 598 VCLAN 602
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 VCLAN 7
VCLAN
Sbjct: 598 VCLAN 602
>sp|GG_HHV11|ENVELOPE glycoprotein G|Human herpesvirus 1 (strain 17)
Query: 1 KYVCLANK 8
+YVCL ++
Sbjct: 229 RYVCLPSE 236
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 VCLANKNC 10
VC+ K C
Sbjct: 965 VCMGEKPC 972
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 KYVCLANKN 9
+ VC A KN
Sbjct: 1524 RMVCQATKN 1532
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 KYVCLANKN 9
+ VC A KN
Sbjct: 1524 RMVCQATKN 1532
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 YVCLANKNC 10
+ C+ +K C
Sbjct: 108 FACMDSKTC 116
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 KYVCLANKNC 10
KY KNC
Sbjct: 95 KYAAKLKKNC 104
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 3 VCLANKN 9
VCL N N
Sbjct: 93 VCLLNPN 99
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 3 VCLANKN 9
VCL N N
Sbjct: 93 VCLLNPN 99
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 3 VCLANKN 9
VCL N N
Sbjct: 93 VCLLNPN 99
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 KYVCLANK 8
K VC NK
Sbjct: 147 KKVCFVNK 154
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KYVCLANK 8
K VC NK
Sbjct: 147 KKVCFVNK 154
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 KYVCLANK 8
K VC NK
Sbjct: 147 KKVCFVNK 154
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 KYVCLANK 8
K VC NK
Sbjct: 147 KKVCFVNK 154
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 KYVCLANK 8
K VC NK
Sbjct: 147 KKVCFVNK 154
61|Sequence|301|310|ANKNCPVDKR
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 5 CPVDKR 10
CP+DKR
Sbjct: 922 CPLDKR 927
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 5 CPVDKR 10
CP+DKR
Sbjct: 922 CPLDKR 927
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 KNCPVDKR 10
K CP +KR
Sbjct: 926 KECPEEKR 933
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 1 ANKNCPVDK 9
NK+CP +K
Sbjct: 456 GNKDCPGNK 464
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 ANKNCPVD 8
A+ NCP D
Sbjct: 767 ADPNCPPD 774
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CPVDKR 10
CP DKR
Sbjct: 303 CPKDKR 308
>sp|IR01_HCMVA|UNCHARACTERIZED protein HKLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CPVDKR 10
CP DKR
Sbjct: 304 CPKDKR 309
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 NCPVDK 9
+CP+DK
Sbjct: 714 SCPLDK 719
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 NCPVDK 9
+CP+DK
Sbjct: 714 SCPLDK 719
>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain
Query: 2 NKNCPVD 8
NKN P++
Sbjct: 112 NKNSPIN 118
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 KNCP 6
KNCP
Sbjct: 128 KNCP 131
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 NCPVDK 9
NC VDK
Sbjct: 6280 NCNVDK 6285
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 NCPVDK 9
NC VDK
Sbjct: 6318 NCNVDK 6323
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 NCPVDK 9
NC VDK
Sbjct: 6338 NCNVDK 6343
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 NCPVDK 9
NC VDK
Sbjct: 6368 NCNVDK 6373
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 2 NKNCPVD 8
N N PVD
Sbjct: 407 NNNYPVD 413
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 2 NKNCPVD 8
N NC +D
Sbjct: 293 NTNCDID 299
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 NKNCPVD 8
N NC +D
Sbjct: 293 NTNCDID 299
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NKNCPVD 8
N NC +D
Sbjct: 293 NTNCDID 299
62|Sequence|306|315|PVDKRRRNRC
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PTDPRRRSR 117
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PTDPRRRSR 117
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PTDPRRRSR 117
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PTDPRRRSR 117
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PTDPRRRSR 117
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PTDPRRRSR 117
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PTDPRRRSR 117
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PTDPRRRSR 117
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PTDPRRRSR 117
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PTDPRRRSR 117
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PSDPRRRSR 117
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PSDPRRRSR 117
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PTDPRRRSR 117
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PTDPRRRSR 117
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 1 PVDKRRRNR 9
P D RRR+R
Sbjct: 109 PTDPRRRSR 117
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 PVDKRRRNR 9
P D R R+R
Sbjct: 109 PTDPRHRSR 117
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PVDKRRRNR 9
P D R R+R
Sbjct: 109 PTDPRHRSR 117
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 1 PVDKRRRNRC 10
P D+ ++N C
Sbjct: 190 PADQTKKNIC 199
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 PVDKRR 6
P+DKRR
Sbjct: 923 PLDKRR 928
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 PVDKRRRNR 9
P D R R+R
Sbjct: 109 PTDPRHRSR 117
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 PVDKRR 6
P+DKRR
Sbjct: 923 PLDKRR 928
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PVDKRRR 7
P+DK+RR
Sbjct: 160 PIDKQRR 166
>sp|PHOSP_MUMPJ|PHOSPHOPROTEIN virus genotype A (strain
Query: 1 PVDKRRRN 8
PVD+ RR+
Sbjct: 285 PVDELRRS 292
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 1 PVDKRR 6
P+D+RR
Sbjct: 287 PIDERR 292
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 PVDKRR 6
P+D+RR
Sbjct: 287 PIDERR 292
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 KRRRNRC 10
KRR N C
Sbjct: 2524 KRRLNNC 2530
>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)
Query: 1 PVDKRRRN 8
PVD+ RR+
Sbjct: 285 PVDELRRS 292
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 KRRRNRC 10
KRR N C
Sbjct: 2524 KRRLNNC 2530
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 KRRRNRC 10
KRR N C
Sbjct: 2524 KRRLNNC 2530
>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain
Query: 1 PVDKRRRN 8
PVD+ RR+
Sbjct: 285 PVDELRRS 292
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 KRRRNRC 10
KRR N C
Sbjct: 2524 KRRLNNC 2530
>sp|PHOSP_MUMPS|PHOSPHOPROTEIN virus (strain SBL) (MuV)
Query: 1 PVDKRRRN 8
PVD+ RR+
Sbjct: 285 PVDELRRS 292
>sp|PHOSP_MUMP1|PHOSPHOPROTEIN virus (strain SBL-1) (MuV)
Query: 1 PVDKRRRN 8
PVD+ RR+
Sbjct: 284 PVDELRRS 291
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PVDKRR 6
P+D+RR
Sbjct: 287 PIDERR 292
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PVDKRR 6
P+D+RR
Sbjct: 287 PIDERR 292
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 KRRRNRC 10
KRR N C
Sbjct: 2524 KRRLNNC 2530
>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain
Query: 1 PVDKRRRN 8
PVD+ RR+
Sbjct: 285 PVDELRRS 292
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 PVDKRRRNR 9
P D R R+R
Sbjct: 109 PTDPRHRSR 117
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 5 RRRNRC 10
+RRN C
Sbjct: 302 KRRNHC 307
63|Sequence|311|320|RRNRCQYCRF
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 3 NRCQYC 8
NRC+YC
Sbjct: 151 NRCEYC 156
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 3 NRCQYC 8
+RCQYC
Sbjct: 226 HRCQYC 231
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 3 NRCQYC 8
+RCQYC
Sbjct: 226 HRCQYC 231
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 6 QYCRF 10
QYCRF
Sbjct: 2966 QYCRF 2970
Query: 5 CQYCR 9
C YCR
Sbjct: 4311 CLYCR 4315
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 6 QYCRF 10
QYCRF
Sbjct: 2966 QYCRF 2970
Query: 5 CQYCR 9
C YCR
Sbjct: 4311 CLYCR 4315
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 RNRCQYCR 9
+++C YC+
Sbjct: 499 KDQCAYCK 506
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 RNRCQYCR 9
+++C YC+
Sbjct: 499 KDQCAYCK 506
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 RNRCQYCR 9
+++C YC+
Sbjct: 499 KDQCAYCK 506
>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 RNRCQYCR 9
+++C YC+
Sbjct: 499 KDQCAYCK 506
>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 RNRCQYCR 9
+++C YC+
Sbjct: 499 KDQCAYCK 506
>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 RNRCQYCR 9
+++C YC+
Sbjct: 499 KDQCAYCK 506
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 4 RCQYC 8
RC+YC
Sbjct: 218 RCEYC 222
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 RRNRCQY 7
R+N CQ+
Sbjct: 924 RKNNCQF 930
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 RRNRCQY 7
R+N CQ+
Sbjct: 924 RKNNCQF 930
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 RRNRCQYCRF 10
++ RCQ C +
Sbjct: 2951 QQGRCQSCVY 2960
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 RRNRCQYCRF 10
++ RCQ C +
Sbjct: 2951 QQGRCQSCVY 2960
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 RRNRCQYCRF 10
++ RCQ C +
Sbjct: 2951 QQGRCQSCVY 2960
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RNRCQYCR 9
R+RCQ R
Sbjct: 148 RHRCQAIR 155
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RNRCQYCR 9
R+RCQ R
Sbjct: 148 RHRCQAIR 155
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 RNRCQYCR 9
R+RCQ R
Sbjct: 148 RHRCQAIR 155
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 RCQYC 8
+C+YC
Sbjct: 1958 KCKYC 1962
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 4 RCQYC 8
+C+YC
Sbjct: 1958 KCKYC 1962
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 4 RCQYC 8
+C+YC
Sbjct: 1958 KCKYC 1962
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 CQYCR 9
C YCR
Sbjct: 4327 CLYCR 4331
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 1 RRNRCQYCR 9
R CQ CR
Sbjct: 52 RNTACQMCR 60
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 CQYCR 9
C YCR
Sbjct: 4304 CLYCR 4308
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 5 CQYCR 9
C YCR
Sbjct: 3982 CLYCR 3986
>sp|PG176_MONPV|PROTEIN OPG176|Monkeypox virus (MPXV)
Query: 1 RRNRCQYCR 9
R N C+Y R
Sbjct: 201 RYNLCKYLR 209
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 5 CQYCR 9
C YCR
Sbjct: 335 CPYCR 339
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 RRNRCQYC 8
+ N CQ C
Sbjct: 1116 KENPCQLC 1123
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 RCQYC 8
RCQ C
Sbjct: 846 RCQQC 850
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 CQYCR 9
C YCR
Sbjct: 4327 CLYCR 4331
>sp|PG176_VAR67|PROTEIN OPG176|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RRNRCQYCR 9
R N C+Y R
Sbjct: 201 RYNLCKYLR 209
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 CQYCR 9
C YCR
Sbjct: 4304 CLYCR 4308
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 CQYCR 9
C YCR
Sbjct: 919 CPYCR 923
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 CQYCR 9
C YCR
Sbjct: 3982 CLYCR 3986
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 5 CQYCR 9
C YCR
Sbjct: 4394 CIYCR 4398
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 5 CQYCR 9
C YCR
Sbjct: 4007 CIYCR 4011
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 5 CQYCR 9
C YCR
Sbjct: 4364 CIYCR 4368
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RNRCQYCRF 10
R+R YC +
Sbjct: 328 RSRVAYCTY 336
>sp|VE6_HPV23|PROTEIN E6|Human papillomavirus 23
Query: 4 RCQYC 8
RCQYC
Sbjct: 116 RCQYC 120
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 5 CQYCR 9
C YCR
Sbjct: 4344 CIYCR 4348
>sp|VE6_HPV03|PROTEIN E6|Human papillomavirus 3
Query: 2 RNRCQYC 8
R CQYC
Sbjct: 136 RGSCQYC 142
>sp|VE6_HPV28|PROTEIN E6|Human papillomavirus 28
Query: 2 RNRCQYC 8
R CQYC
Sbjct: 130 RGSCQYC 136
>sp|VE6_HPV22|PROTEIN E6|Human papillomavirus 22
Query: 4 RCQYC 8
RCQYC
Sbjct: 124 RCQYC 128
>sp|M21_HRSV|PROTEIN M2-1|Human respiratory syncytial virus
Query: 1 RRNRCQY 7
RRN C++
Sbjct: 3 RRNPCKF 9
>sp|VE6_HPV38|PROTEIN E6|Human papillomavirus 38
Query: 4 RCQYC 8
RCQYC
Sbjct: 100 RCQYC 104
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 CQYCR 9
C YCR
Sbjct: 4306 CIYCR 4310
>sp|M21_HRSVA|PROTEIN M2-1|Human respiratory syncytial virus A
Query: 1 RRNRCQY 7
RRN C++
Sbjct: 3 RRNPCKF 9
>sp|M21_HRSVB|PROTEIN M2-1|Human respiratory syncytial virus B
Query: 1 RRNRCQY 7
RRN C++
Sbjct: 3 RRNPCKF 9
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 4 RCQYC 8
RC++C
Sbjct: 222 RCEHC 226
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 CQYCR 9
C YCR
Sbjct: 4007 CIYCR 4011
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 CQYCR 9
C YCR
Sbjct: 4394 CIYCR 4398
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 CQYCR 9
C YCR
Sbjct: 4306 CIYCR 4310
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 CQYCR 9
C YCR
Sbjct: 4364 CIYCR 4368
>sp|Z_LASSJ|RING finger protein Z|Lassa virus (strain Mouse/Sierra
Query: 3 NRCQYCR 9
NRC C+
Sbjct: 62 NRCPICK 68
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 CQYCR 9
C YCR
Sbjct: 4344 CIYCR 4348
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 NRCQYC 8
N C++C
Sbjct: 462 NLCEFC 467
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 3 NRCQYC 8
N C++C
Sbjct: 462 NLCEFC 467
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 3 NRCQYC 8
N C++C
Sbjct: 462 NLCEFC 467
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 RCQYC 8
RC YC
Sbjct: 744 RCPYC 748
64|Sequence|316|325|QYCRFQKCLA
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 QYCRFQKCLA 10
Q+C +++C A
Sbjct: 2700 QHCGYRRCRA 2709
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 1 QYCRFQKCLA 10
+Y R+ KC++
Sbjct: 344 KYTRYFKCMS 353
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 CRFQKCL 9
C+F++C+
Sbjct: 217 CKFRRCI 223
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 CRFQKCL 9
C+F++C+
Sbjct: 217 CKFRRCI 223
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 CRFQKCL 9
C+F++C+
Sbjct: 217 CKFRRCI 223
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 QYCRFQKCL 9
+YCR +C+
Sbjct: 2693 KYCRVGECV 2701
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 2 YCRFQKCL 9
YC Q C+
Sbjct: 82 YCYLQNCV 89
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 QYCRFQKCL 9
+YCR +C+
Sbjct: 2693 KYCRVGECV 2701
>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus
Query: 2 YCRFQKCL 9
Y F+KCL
Sbjct: 351 YFSFKKCL 358
>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate
Query: 2 YCRFQKCL 9
Y F+KCL
Sbjct: 351 YFSFKKCL 358
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 2 YCRFQKCL 9
Y F+KCL
Sbjct: 351 YFSFKKCL 358
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 2 YCRFQKCL 9
Y F+KCL
Sbjct: 351 YFSFKKCL 358
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YCRFQKCL 9
Y F+KCL
Sbjct: 351 YFSFKKCL 358
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 2 YCRFQKCL 9
Y F+KCL
Sbjct: 351 YFSFKKCL 358
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 2 YCRFQKCL 9
Y F+KCL
Sbjct: 351 YFSFKKCL 358
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 2 YCRFQKCL 9
Y F+KCL
Sbjct: 351 YFSFKKCL 358
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 2 YCRFQKCL 9
Y F+KCL
Sbjct: 351 YFSFKKCL 358
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 1 QYCRFQKCLA 10
++C Q+C
Sbjct: 276 KFCNVQQCFG 285
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 1 QYCRFQKCLA 10
++C Q+C
Sbjct: 276 KFCNVQQCFG 285
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2695 QQCGYRRCRA 2704
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2695 QQCGYRRCRA 2704
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2714 QTCGYRRCRA 2723
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2714 QTCGYRRCRA 2723
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2694 QSCGYRRCRA 2703
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2714 QSCGYRRCRA 2723
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2714 QSCGYRRCRA 2723
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2703 QSCGYRRCRA 2712
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2714 QSCGYRRCRA 2723
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2718 QSCGYRRCRA 2727
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 3 CRFQKCL 9
CR+ KC+
Sbjct: 141 CRYLKCV 147
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2699 QSCGYRRCRA 2708
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2700 QSCGYRRCRA 2709
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2692 QNCGYRRCRA 2701
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2692 QNCGYRRCRA 2701
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2691 QNCGYRRCRA 2700
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2691 QNCGYRRCRA 2700
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2691 QNCGYRRCRA 2700
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2691 QNCGYRRCRA 2700
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2691 QNCGYRRCRA 2700
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1
Query: 1 QYCRFQKCLA 10
+Y R+ C++
Sbjct: 304 EYARYHHCVS 313
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2691 QNCGYRRCRA 2700
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 CRFQK 7
CRFQ+
Sbjct: 4511 CRFQR 4515
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QYCRFQKCLA 10
Q C +++C A
Sbjct: 2691 QNCGYRRCRA 2700
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 CRFQK 7
CRFQ+
Sbjct: 4481 CRFQR 4485
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 CRFQK 7
CRFQ+
Sbjct: 4461 CRFQR 4465
>sp|E312_ADE05|EARLY E3A 12.5 kDa protein|Human adenovirus C serotype 5
Query: 2 YCRFQKCLA 10
+CR KC A
Sbjct: 16 HCRRHKCFA 24
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 CRFQK 7
CRFQ+
Sbjct: 4423 CRFQR 4427
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 CRFQKC 8
CR Q C
Sbjct: 1161 CRLQSC 1166
65|Sequence|321|330|QKCLAVGMVK
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 CLAVGMV 9
C+AVGMV
Sbjct: 759 CIAVGMV 765
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 CLAVGMV 9
C+AVGMV
Sbjct: 758 CIAVGMV 764
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 CLAVGMV 9
C+AVGMV
Sbjct: 759 CIAVGMV 765
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 CLAVGMV 9
C+AVGMV
Sbjct: 759 CIAVGMV 765
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 CLAVGMV 9
C+AVGMV
Sbjct: 759 CIAVGMV 765
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 QKCLAVG 7
Q CLA+G
Sbjct: 1486 QSCLAIG 1492
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 QKCLAVGMVK 10
Q C+ MV+
Sbjct: 473 QSCIGTAMVR 482
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QKCLAVGMVK 10
Q C+ MV+
Sbjct: 473 QSCIGTAMVR 482
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QKCLAV 6
Q+CLAV
Sbjct: 1986 QQCLAV 1991
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QKCLAV 6
Q+CLAV
Sbjct: 1986 QQCLAV 1991
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QKCLAV 6
Q+CLAV
Sbjct: 1986 QQCLAV 1991
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QKCLAV 6
Q+CLAV
Sbjct: 1986 QQCLAV 1991
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QKCLAV 6
Q+CLAV
Sbjct: 1986 QQCLAV 1991
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 QKCLAVGM 8
Q C AVG+
Sbjct: 618 QNCTAVGV 625
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 CLAVGMV 9
C+ +GM+
Sbjct: 14 CMVIGMI 20
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 3 CLAVGMV 9
CL VG++
Sbjct: 14 CLVVGLI 20
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 CLAVGMV 9
C+A+G++
Sbjct: 757 CIAIGII 763
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 CLAVGMV 9
C+A+G++
Sbjct: 757 CIAIGII 763
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 CLAVGMV 9
C+A+G++
Sbjct: 757 CIAIGII 763
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 CLAVGMV 9
C+A+G++
Sbjct: 757 CIAIGII 763
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 CLAVGMV 9
C+A+G++
Sbjct: 757 CIAIGII 763
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 5 AVGMVK 10
AVGM+K
Sbjct: 1243 AVGMIK 1248
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1
Query: 1 QKCLAVGMV 9
+KC VG+V
Sbjct: 441 EKCPVVGVV 449
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 CLAVGMV 9
CL+VG V
Sbjct: 1675 CLSVGCV 1681
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 CLAVGMV 9
CL+VG V
Sbjct: 1676 CLSVGCV 1682
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 CLAVGMV 9
CL+VG V
Sbjct: 1682 CLSVGCV 1688
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 CLAVGMV 9
CL+VG V
Sbjct: 1680 CLSVGCV 1686
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 CLAVGMV 9
CL+VG V
Sbjct: 1680 CLSVGCV 1686
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 CLAVGMV 9
CL+VG V
Sbjct: 1678 CLSVGCV 1684
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 CLAVGMV 9
CL+VG V
Sbjct: 1679 CLSVGCV 1685
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 CLAVGMV 9
CL+VG V
Sbjct: 1679 CLSVGSV 1685
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 CLAVGMV 9
CL+VG V
Sbjct: 1674 CLSVGSV 1680
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 QKCLAVGMV 9
+KC A G+V
Sbjct: 1053 KKCSATGLV 1061
66|Sequence|326|335|VGMVKEVVRT
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 4 VKEVVRT 10
+K+VVRT
Sbjct: 414 IKQVVRT 420
67|Sequence|331|340|EVVRTDSLKG
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 5 TDSLKG 10
TD+LKG
Sbjct: 311 TDTLKG 316
68|Sequence|336|345|DSLKGRRGRL
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 DSLKGRRGRL 10
D +GRRG+L
Sbjct: 216 DLTEGRRGKL 225
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 DSLKGRRGRL 10
D +GRRG+L
Sbjct: 216 DLTEGRRGKL 225
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DSLKGRRGRL 10
DSL+GR RL
Sbjct: 1016 DSLEGRGWRL 1025
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 DSLKGRRGRL 10
D +GRRG+L
Sbjct: 216 DLSEGRRGKL 225
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 DSLKGRRGRL 10
D +GRRG+L
Sbjct: 216 DLSEGRRGKL 225
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 DSLKGRRGRL 10
D +GRRG+L
Sbjct: 216 DLSEGRRGKL 225
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DSLKGRRGRL 10
DSL+GR RL
Sbjct: 1016 DSLEGRGLRL 1025
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 4 KGRRGRL 10
+GRRG+L
Sbjct: 218 EGRRGKL 224
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 4 KGRRGRL 10
+GRRG+L
Sbjct: 218 EGRRGKL 224
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 1 DSLKGRRGRL 10
D KGR GR+
Sbjct: 490 DQRKGRVGRV 499
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 DSLKGRRGRL 10
D KGR GR+
Sbjct: 490 DQRKGRVGRV 499
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 1 DSLKGRRGRL 10
D KGR GR+
Sbjct: 490 DQRKGRVGRV 499
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DSLKGRRGRL 10
D KGR GR+
Sbjct: 490 DQRKGRVGRV 499
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DSLKGRRGRL 10
D KGR GR+
Sbjct: 490 DQRKGRVGRV 499
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 1 DSLKGRRGRL 10
D KGR GR+
Sbjct: 490 DQRKGRVGRV 499
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 DSLKGRRGR 9
++L+GR+GR
Sbjct: 263 EALEGRQGR 271
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain GD1)
Query: 1 DSLKGRRGR 9
++L+GR+GR
Sbjct: 263 EALEGRQGR 271
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 DSLKGRRGR 9
++L+GR+GR
Sbjct: 263 EALEGRQGR 271
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 DSLKGRRGR 9
DSL RRG+
Sbjct: 87 DSLNKRRGK 95
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 LKGRRG 8
LKGR+G
Sbjct: 1532 LKGRKG 1537
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 LKGRRG 8
LKGR+G
Sbjct: 1532 LKGRKG 1537
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 DSLKGRRGR 9
DSL RRG+
Sbjct: 87 DSLNRRRGK 95
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 LKGRRGRL 10
+KGR GR+
Sbjct: 1415 IKGRLGRV 1422
Query: 3 LKGRRGRL 10
+KG+RG L
Sbjct: 162 IKGQRGSL 169
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 LKGRRGRL 10
+KGR GR+
Sbjct: 1415 IKGRLGRV 1422
Query: 3 LKGRRGRL 10
+KG+RG L
Sbjct: 162 IKGQRGSL 169
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 LKGRRGRL 10
+KGR GR+
Sbjct: 1415 IKGRLGRV 1422
Query: 3 LKGRRGRL 10
+KG+RG L
Sbjct: 162 IKGQRGSL 169
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 LKGRRGRL 10
+KGR GR+
Sbjct: 1415 IKGRLGRV 1422
Query: 3 LKGRRGRL 10
+KG+RG L
Sbjct: 162 IKGQRGSL 169
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 LKGRRGRL 10
+KGR GR+
Sbjct: 1415 IKGRLGRV 1422
Query: 3 LKGRRGRL 10
+KG+RG L
Sbjct: 162 IKGQRGSL 169
>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GRRGR 9
GRRGR
Sbjct: 100 GRRGR 104
>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GRRGR 9
GRRGR
Sbjct: 100 GRRGR 104
>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)
Query: 4 KGRRGRL 10
+GR+GR+
Sbjct: 14 RGRQGRI 20
69|Sequence|341|350|RRGRLPSKPK
>sp|VIL6_HHV8P|VIRAL interleukin-6 homolog|Human herpesvirus 8 type P
Query: 2 RGRLPSKPK 10
RG+LP P+
Sbjct: 21 RGKLPDAPE 29
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 RRGRLPSKPK 10
RRGR+ PK
Sbjct: 1932 RRGRIGRNPK 1941
>sp|F_HCV77|F protein|Hepatitis C virus genotype 1a
Query: 1 RRGRLPS 7
RRGRLPS
Sbjct: 49 RRGRLPS 55
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RRGRLPSKPK 10
RRGR+ PK
Sbjct: 1932 RRGRIGRNPK 1941
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RRGRLPSKPK 10
RRGR+ PK
Sbjct: 1932 RRGRIGRNPK 1941
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RRGRLPSKPK 10
RRGR+ PK
Sbjct: 1932 RRGRIGRNPK 1941
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RRGRLPSKPK 10
RRGR+ PK
Sbjct: 1932 RRGRIGRNPK 1941
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RRGRLP 6
RRGR+P
Sbjct: 232 RRGRIP 237
>sp|RP19_VAR67|DNA-DIRECTED RNA polymerase 19 kDa|Variola virus (isolate
Query: 1 RRGRLP 6
+RGRLP
Sbjct: 94 QRGRLP 99
>sp|RP19_VACCC|DNA-DIRECTED RNA polymerase 19 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RRGRLP 6
+RGRLP
Sbjct: 94 QRGRLP 99
>sp|RP19_VACCA|DNA-DIRECTED RNA polymerase 19 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RRGRLP 6
+RGRLP
Sbjct: 94 QRGRLP 99
>sp|RP19_MONPV|DNA-DIRECTED RNA polymerase 19 kDa|Monkeypox virus (MPXV)
Query: 1 RRGRLP 6
+RGRLP
Sbjct: 91 QRGRLP 96
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 3 GRLPSKPK 10
G+LP PK
Sbjct: 1309 GKLPGDPK 1316
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 5 LPSKPK 10
LP KPK
Sbjct: 982 LPGKPK 987
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 1 RRGRLPSK 8
R GR+PS+
Sbjct: 21 RPGRIPSR 28
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 1 RRGRLPSK 8
R GR+PS+
Sbjct: 21 RPGRIPSR 28
>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 RRGRLPSKP 9
RRG LP+ P
Sbjct: 2 RRGVLPTAP 10
>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 RRGRLPSKPK 10
+LPSKP+
Sbjct: 21 HENQLPSKPQ 30
>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 RRGRLPSKP 9
RRG LP+ P
Sbjct: 2 RRGVLPTAP 10
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 RLPSKPK 10
RLPS PK
Sbjct: 139 RLPSPPK 145
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 RLPSKPK 10
RLPS PK
Sbjct: 139 RLPSPPK 145
70|Sequence|346|355|PSKPKSPQEP
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 PSKPKSPQE 9
P K +SPQ+
Sbjct: 2238 PEKQRSPQD 2246
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 PSKPKSPQE 9
P K +SPQ+
Sbjct: 2242 PEKQRSPQD 2250
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 PSKPKSPQE 9
P K +SPQ+
Sbjct: 2242 PEKQRSPQD 2250
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 SKPKSPQEP 10
S KSPQ P
Sbjct: 1698 SAVKSPQAP 1706
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 PSKPKSPQ 8
P KP++PQ
Sbjct: 1225 PPKPETPQ 1232
>sp|RNB_HHV11|ACCESSORY factor US11|Human herpesvirus 1 (strain 17)
Query: 1 PSKPKSPQEP 10
P +P+SP+EP
Sbjct: 124 PRQPRSPREP 133
Query: 1 PSKPKSPQEP 10
P +P+SP+EP
Sbjct: 130 PREPRSPREP 139
Query: 1 PSKPKSPQEP 10
P +P+SP+EP
Sbjct: 136 PREPRSPREP 145
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 1 PSKPKSPQE 9
PS P +PQE
Sbjct: 600 PSSPSAPQE 608
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 1 PSKPKSPQE 9
PS P +PQE
Sbjct: 600 PSSPSAPQE 608
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 1 PSKPKSPQE 9
PS P +PQE
Sbjct: 600 PSSPSAPQE 608
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 1 PSKPKSPQE 9
PS P +PQE
Sbjct: 600 PSSPSAPQE 608
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 1 PSKPKSPQE 9
PS P +PQE
Sbjct: 600 PSSPSAPQE 608
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 PSKPKSPQEP 10
PS+ + P+EP
Sbjct: 16 PSERQEPREP 25
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 PSKPKSPQEP 10
PS+ + P+EP
Sbjct: 16 PSERQEPREP 25
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2215 PEKQRTPQD 2223
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2215 PEKQRTPQD 2223
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2216 PEKQRTPQD 2224
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2215 PEKQRTPQD 2223
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2215 PEKQRTPQD 2223
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2215 PEKQRTPQD 2223
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2213 PEKQRTPQD 2221
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2216 PEKQRTPQD 2224
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2215 PEKQRTPQD 2223
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2216 PEKQRTPQD 2224
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2216 PEKQRTPQD 2224
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2215 PEKQRTPQD 2223
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2216 PEKQRTPQD 2224
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2216 PEKQRTPQD 2224
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 4 PKSPQE 9
PKSP E
Sbjct: 94 PKSPTE 99
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2215 PEKQRTPQD 2223
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2215 PEKQRTPQD 2223
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PSKPKSPQE 9
P K ++PQ+
Sbjct: 2215 PEKQRTPQD 2223
71|Sequence|351|360|SPQEPSPPSP
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SPQEPSPPS 9
+P++P+PP+
Sbjct: 24 TPEQPAPPA 32
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SPQEPSPPS 9
+P++P+PP+
Sbjct: 24 TPEQPAPPA 32
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SPQEPSPPS 9
+P++P+PP+
Sbjct: 24 TPEQPAPPA 32
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SPQEPSPPSP 10
+P+ P PP P
Sbjct: 155 APRRPKPPVP 164
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 1 SPQEPSPPSP 10
+PQ PP P
Sbjct: 20 APQVTEPPLP 29
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SPQEPSPP 8
SP+EP P
Sbjct: 713 SPREPDRP 720
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 1 SPQEPSPPSP 10
S Q PS P P
Sbjct: 242 SAQAPSSPPP 251
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 5 PSPPSP 10
P PPSP
Sbjct: 626 PPPPSP 631
>sp|VIF_HV1V9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SPQEPSPPSP 10
SP+ PP P
Sbjct: 155 SPKRTKPPLP 164
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 5 PSPPSP 10
P PPSP
Sbjct: 622 PRPPSP 627
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 4 EPSPP 8
+PSPP
Sbjct: 48 QPSPP 52
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 EPSPP 8
+PSPP
Sbjct: 48 QPSPP 52
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PQEPSPPSP 10
PQ P PSP
Sbjct: 441 PQLPRGPSP 449
>sp|VP12_CTFVL|UNCHARACTERIZED protein VP12|Colorado tick fever virus (strain
Query: 2 PQEPSPPS 9
P+EP+PP+
Sbjct: 136 PREPAPPA 143
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 3 QEPSPP 8
Q+P PP
Sbjct: 13 QKPGPP 18
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 QEPSPP 8
Q+PSPP
Sbjct: 256 QKPSPP 261
72|Sequence|356|365|SPPSPPVSLI
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 2 PPSPPVSLI 10
PP+PPV+ +
Sbjct: 14 PPTPPVARV 22
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 2 PPSPPVSLI 10
PP+PPV+ +
Sbjct: 14 PPTPPVARV 22
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 2 PPSPPVSLI 10
PP+PPV+ +
Sbjct: 14 PPTPPVARV 22
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 2 PPSPPVSLI 10
PP+PPV+ +
Sbjct: 14 PPTPPVARV 22
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 2 PPSPPVSLI 10
PP+PPV+ +
Sbjct: 14 PPTPPVARV 22
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 2 PPSPPVSLI 10
PP+PPV+ +
Sbjct: 14 PPTPPVARV 22
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 SPPSPP 6
+PP PP
Sbjct: 2863 APPPPP 2868
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 2 PPSPPVSL 9
PPSPP L
Sbjct: 648 PPSPPAPL 655
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 PPSPPVSL 9
PPSPP L
Sbjct: 649 PPSPPAPL 656
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 2 PPSPPVSL 9
PP+ PV L
Sbjct: 384 PPTDPVEL 391
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 14 PPSTPVARV 22
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 14 PPSTPVARV 22
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 14 PPSTPVARV 22
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPSPP 6
PP+PP
Sbjct: 1952 PPNPP 1956
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPSPP 6
PP+PP
Sbjct: 1952 PPNPP 1956
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPSPP 6
PP+PP
Sbjct: 1952 PPNPP 1956
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 14 PPSTPVARV 22
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPSPP 6
PP+PP
Sbjct: 1952 PPNPP 1956
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 PPSPPVS 8
PP+PP +
Sbjct: 183 PPTPPAT 189
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 2 PPSPPVSL 9
PP+ PV L
Sbjct: 384 PPTDPVEL 391
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 14 PPSTPVARV 22
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPSPP 6
PP+PP
Sbjct: 1952 PPNPP 1956
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 14 PPSTPVARV 22
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 14 PPSTPVARV 22
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 1 SPPSPPVSLI 10
SPPSPP ++
Sbjct: 115 SPPSPPSHIL 124
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 14 PPSAPVARV 22
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 14 PPSTPVARV 22
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 43 PPSTPVARV 51
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 15 PPSTPVARV 23
>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 SPPSPPVS 8
+PP+PP +
Sbjct: 23 TPPTPPAA 30
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 SPPSPPVS 8
+PP+ PVS
Sbjct: 669 TPPNSPVS 676
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 14 PPSTPVAKV 22
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 14 PPSTPVARV 22
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 1 SPPSPP 6
+PP+PP
Sbjct: 597 NPPAPP 602
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 SPPSPPVS 8
+PP+PP +
Sbjct: 19 TPPAPPAA 26
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 SPPSPPVSLI 10
SPP+ P S +
Sbjct: 670 SPPNSPASSV 679
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 14 PPSTPVARV 22
>sp|REX_HTL32|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 1 SPPSPPVSL 9
SPPSPP L
Sbjct: 95 SPPSPPREL 103
>sp|REX_HTL3P|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 1 SPPSPPVSL 9
SPPSPP L
Sbjct: 95 SPPSPPKEL 103
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 2 PPSPPVSLI 10
PPS PV+ +
Sbjct: 14 PPSTPVARV 22
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 1 SPPSPPVSL 9
+PP PP+ L
Sbjct: 85 APPDPPMDL 93
73|Sequence|361|370|PVSLISALVR
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 1 PVSLISALV 9
P SLI+ALV
Sbjct: 656 PESLITALV 664
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 1 PVSLISALV 9
P SLI+ALV
Sbjct: 656 PESLITALV 664
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 1 PVSLISALV 9
P SLI+ALV
Sbjct: 656 PESLITALV 664
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 1 PVSLISALV 9
P SLI+ALV
Sbjct: 656 PESLITALV 664
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 1 PVSLISALV 9
P SL++ALV
Sbjct: 656 PESLVTALV 664
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 VSLISALV 9
V LISALV
Sbjct: 1059 VKLISALV 1066
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 VSLISALV 9
V LISALV
Sbjct: 1059 VKLISALV 1066
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 VSLISALV 9
+ LISALV
Sbjct: 1059 IKLISALV 1066
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 VSLISALV 9
+ LISALV
Sbjct: 1059 IKLISALV 1066
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 VSLISALV 9
+ LISALV
Sbjct: 1059 IKLISALV 1066
74|Sequence|366|375|SALVRAHVDS
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 2 ALVRAHVDS 10
+L R HVDS
Sbjct: 7 SLFREHVDS 15
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 SALVRAHVDS 10
S L+R H DS
Sbjct: 1504 SDLIRVHPDS 1513
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 SALVRAHVDS 10
S L+R H DS
Sbjct: 173 SDLIRVHPDS 182
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 LVRAHVDS 10
LVR H DS
Sbjct: 1507 LVRVHPDS 1514
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 LVRAHVDS 10
LVR H DS
Sbjct: 1511 LVRVHPDS 1518
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 LVRAHVDS 10
LVR H DS
Sbjct: 1507 LVRVHPDS 1514
75|Sequence|371|380|AHVDSNPAMT
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 1 AHVDSNPAMT 10
HV +NPA T
Sbjct: 736 GHVSTNPADT 745
>sp|YVFF_VACCC|UNCHARACTERIZED 8.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HVDSNPA 8
HV++NP
Sbjct: 65 HVNTNPG 71
>sp|PAX_I57A3|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 VDSNPAMT 10
+DSNP T
Sbjct: 234 MDSNPTAT 241
>sp|PAX_I57A2|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 VDSNPAMT 10
+DSNP T
Sbjct: 234 MDSNPTAT 241
>sp|PAX_I57A1|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 VDSNPAMT 10
+DSNP T
Sbjct: 234 MDSNPTAT 241
>sp|TRM2_VZVD|TRIPARTITE terminase subunit 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 DSNPAM 9
DSNP+M
Sbjct: 24 DSNPSM 29
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 AHVDSNPA 8
HV NPA
Sbjct: 738 GHVSINPA 745
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 AHVDSNP 7
A+VD NP
Sbjct: 473 AYVDHNP 479
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 AHVDSNP 7
A+VD NP
Sbjct: 473 AYVDHNP 479
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HVDSNPAMT 10
++D+NP T
Sbjct: 43 YIDNNPECT 51
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 2 HVDSNPAMT 10
++D+NP T
Sbjct: 43 YIDNNPECT 51
76|Sequence|376|385|NPAMTSLDYS
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 PAMTSL 7
PAMTS+
Sbjct: 139 PAMTSI 144
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 NPAMTSLDY 9
NPA + DY
Sbjct: 670 NPARSKKDY 678
77|Sequence|381|390|SLDYSRFQAN
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype
Query: 1 SLDYSRFQAN 10
S DY+RF AN
Sbjct: 49 SFDYTRFVAN 58
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 DYSRFQ 8
+YSRFQ
Sbjct: 38 EYSRFQ 43
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 SLDYSRFQAN 10
++D++ QAN
Sbjct: 207 AMDFTTLQAN 216
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 3 DYSRFQAN 10
DYSR+ N
Sbjct: 514 DYSRYYGN 521
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 LDYSRFQA 9
LDY F+A
Sbjct: 599 LDYVNFEA 606
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 SLDYSRFQAN 10
++D++ QAN
Sbjct: 205 AMDFASLQAN 214
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 SLDYSRFQAN 10
++D++ QAN
Sbjct: 205 AMDFASLQAN 214
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 SLDYSRFQAN 10
++D++ QAN
Sbjct: 207 AMDFTTLQAN 216
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 DYSRFQAN 10
DYSR+ N
Sbjct: 518 DYSRYFGN 525
78|Sequence|386|395|RFQANPDYQM
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 FQANPDY 8
F+ANP+Y
Sbjct: 838 FKANPNY 844
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 FQANPDY 8
F+ANP+Y
Sbjct: 838 FKANPNY 844
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RFQANPDYQ 9
+FQ +P YQ
Sbjct: 830 KFQKDPPYQ 838
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RFQANPDYQ 9
+FQ +P YQ
Sbjct: 831 KFQKDPPYQ 839
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 RFQANP 6
RFQ NP
Sbjct: 2031 RFQTNP 2036
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 1 RFQANPDYQM 10
RF+ P Y++
Sbjct: 126 RFRVYPSYKL 135
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RFQANPDYQ 9
+FQ +P Y+
Sbjct: 831 KFQKDPPYK 839
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 RFQANPDY 8
+ NPDY
Sbjct: 506 KLSKNPDY 513
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RFQANPDYQ 9
+FQ +P Y+
Sbjct: 829 KFQKDPPYR 837
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 RFQANPDY 8
+ NPDY
Sbjct: 507 KLSKNPDY 514
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 RFQANPDY 8
+ NPDY
Sbjct: 506 KLSKNPDY 513
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RFQANPDYQ 9
+FQ +P Y+
Sbjct: 831 KFQKDPPYR 839
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 5 NPDYQ 9
NPDY+
Sbjct: 1837 NPDYK 1841
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 5 NPDYQ 9
NPDY+
Sbjct: 1837 NPDYK 1841
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 RFQANPDY 8
+ NPDY
Sbjct: 506 KLSKNPDY 513
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 5 NPDYQ 9
NPDY+
Sbjct: 1837 NPDYK 1841
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 5 NPDYQ 9
NPDY+
Sbjct: 1837 NPDYK 1841
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 5 NPDYQ 9
NPDY+
Sbjct: 1837 NPDYK 1841
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 3 QANPDYQ 9
+A PDY+
Sbjct: 317 EAEPDYK 323
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 5 NPDYQ 9
NPDY+
Sbjct: 1837 NPDYK 1841
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 5 NPDYQ 9
NPDY+
Sbjct: 1837 NPDYK 1841
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 5 NPDYQ 9
NPDY+
Sbjct: 1838 NPDYR 1842
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 RFQANPDYQ 9
R PDYQ
Sbjct: 884 RSMERPDYQ 892
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 4 ANPDYQ 9
+NP+YQ
Sbjct: 488 SNPNYQ 493
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 RFQANPDY 8
+ NPDY
Sbjct: 506 KLSKNPDY 513
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 RFQANPDYQ 9
R PDYQ
Sbjct: 884 RSMERPDYQ 892
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 RFQANPDY 8
+ NPDY
Sbjct: 507 KLSKNPDY 514
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 RFQANPDY 8
+ NPDY
Sbjct: 506 KLSKNPDY 513
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 RFQANPDY 8
+ NPDY
Sbjct: 506 KLSKNPDY 513
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 QANPDYQ 9
Q N DYQ
Sbjct: 474 QTNDDYQ 480
79|Sequence|391|400|PDYQMSGDDT
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 PDYQMSGD 8
PDY + GD
Sbjct: 2252 PDYDIHGD 2259
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 PDYQMSGD 8
PDY + GD
Sbjct: 2252 PDYDIHGD 2259
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 PDYQMSGD 8
PDY + GD
Sbjct: 2252 PDYDIHGD 2259
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PDYQMSGDD 9
PD+ + GDD
Sbjct: 2741 PDFLVCGDD 2749
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PDYQMSGDD 9
PD+ + GDD
Sbjct: 2741 PDFLVCGDD 2749
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 DY--QMSGDD 9
DY QM+GDD
Sbjct: 1418 DYGKQMAGDD 1427
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1422 QMAGDD 1427
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1421 QMAGDD 1426
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1415 QMAGDD 1420
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1420 QMAGDD 1425
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1416 QMAGDD 1421
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1421 QMAGDD 1426
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1421 QMAGDD 1426
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1425 QMAGDD 1430
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1433 QMAGDD 1438
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1423 QMAGDD 1428
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1421 QMAGDD 1426
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1421 QMAGDD 1426
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1422 QMAGDD 1427
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1426 QMAGDD 1431
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1433 QMAGDD 1438
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1433 QMAGDD 1438
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1418 QMAGDD 1423
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1421 QMAGDD 1426
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1416 QMAGDD 1421
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1419 QMAGDD 1424
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1418 QMAGDD 1423
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1420 QMAGDD 1425
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1418 QMAGDD 1423
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1421 QMAGDD 1426
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1416 QMAGDD 1421
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 1414 QMAGDD 1419
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 PDYQMSGDDT 10
P Y DDT
Sbjct: 525 PTYSWGADDT 534
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 DYQMSGDD 9
D+ M GDD
Sbjct: 1186 DFCMQGDD 1193
>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)
Query: 1 PDYQMSG 7
PD +MSG
Sbjct: 176 PDARMSG 182
>sp|POL_HV1Z6|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QMSGDD 9
QM+GDD
Sbjct: 134 QMAGDD 139
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 PDYQMSGDD 9
P+Y ++GD
Sbjct: 197 PEYCLAGDS 205
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 2 DYQMSGDDT 10
DY SGD T
Sbjct: 247 DYAASGDPT 255
>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)
Query: 1 PDYQMSG 7
PD +MSG
Sbjct: 136 PDARMSG 142
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 2 DYQMSGDDT 10
DY SGD T
Sbjct: 290 DYAASGDPT 298
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 2 DYQMSGDDT 10
DY SGD T
Sbjct: 290 DYAASGDPT 298
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 DYQMSGDDT 10
DY SGD T
Sbjct: 290 DYAASGDPT 298
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 2 DYQMSGDDT 10
DY SGD T
Sbjct: 290 DYAASGDPT 298
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 2 DYQMSGDDT 10
DY SGD T
Sbjct: 290 DYAASGDPT 298
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 2 DYQMSGDDT 10
DY SGD T
Sbjct: 290 DYAASGDPT 298
80|Sequence|396|405|SGDDTQHIQQ
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 SGDDTQHI 8
+G +TQHI
Sbjct: 496 TGPNTQHI 503
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 4 DTQHIQQ 10
DT HI+Q
Sbjct: 568 DTTHIEQ 574
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 4 DTQHIQQ 10
DT HI+Q
Sbjct: 568 DTTHIEQ 574
>sp|U23_HHV6U|GLYCOPROTEIN U23|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GDDTQHIQ 9
GD+TQ+I+
Sbjct: 113 GDETQNIE 120
>sp|E3B14_ADE07|EARLY E3B 14.9 kDa protein|Human adenovirus B serotype 7
Query: 6 QHIQQ 10
QHIQQ
Sbjct: 101 QHIQQ 105
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 4 DTQHIQQ 10
DT HI Q
Sbjct: 567 DTSHISQ 573
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 4 DTQHIQQ 10
DT HI Q
Sbjct: 566 DTNHISQ 572
>sp|E3B14_ADE03|EARLY E3B 14.5 kDa protein|Human adenovirus B serotype 3
Query: 6 QHIQQ 10
QHIQQ
Sbjct: 101 QHIQQ 105
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 4 DTQHI 8
DTQHI
Sbjct: 412 DTQHI 416
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 4 DTQHI 8
DTQHI
Sbjct: 412 DTQHI 416
81|Sequence|401|410|QHIQQFYDLL
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 QHIQQFYDL 9
QHI FYD+
Sbjct: 380 QHIPGFYDV 388
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QHIQQFYDL 9
QHI FYD+
Sbjct: 395 QHIPGFYDV 403
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 HIQQFYDLL 10
HI+QF D
Sbjct: 1036 HIKQFLDFF 1044
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 2 HIQQFYDLL 10
H++ FY +L
Sbjct: 652 HVKSFYGML 660
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 QHIQQFYDLL 10
QH+ Y++L
Sbjct: 458 QHLNAVYEIL 467
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 2 HIQQFYDLL 10
H++ FY +L
Sbjct: 656 HLKSFYGML 664
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 HIQQFYDLL 10
H++ FY +L
Sbjct: 656 HLKSFYGML 664
>sp|VE6_HPV23|PROTEIN E6|Human papillomavirus 23
Query: 2 HIQQFYDL 9
IQQFY L
Sbjct: 88 EIQQFYQL 95
>sp|VE6_HPV38|PROTEIN E6|Human papillomavirus 38
Query: 2 HIQQFYDL 9
QQFY+L
Sbjct: 72 ECQQFYEL 79
82|Sequence|406|415|FYDLLTGSME
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 YDLLTGSME 10
+D+L+GS E
Sbjct: 446 FDVLSGSQE 454
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 FYDLLTGSM 9
FY L+TG +
Sbjct: 531 FYKLITGPL 539
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 FYDLLTGSME 10
F D +TGS++
Sbjct: 991 FLDSITGSLK 1000
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FYDLLTGSM 9
F L+TG+M
Sbjct: 1167 FLTLITGNM 1175
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 LTGSME 10
+TGSME
Sbjct: 1230 ITGSME 1235
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FYDLLTGSM 9
F L+TG+M
Sbjct: 887 FVTLITGNM 895
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FYDLLTGSM 9
F L+TG+M
Sbjct: 1167 FVTLITGNM 1175
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FYDLLTGSM 9
F L+TG+M
Sbjct: 1167 FVTLITGNM 1175
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FYDLLTGSM 9
F L+TG+M
Sbjct: 1167 FVTLITGNM 1175
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 FYDLLTGSM 9
F L+TG+M
Sbjct: 1167 FVTLITGNM 1175
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 DLLTGS 8
D+LTGS
Sbjct: 434 DILTGS 439
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 DLLTGS 8
D+LTGS
Sbjct: 434 DILTGS 439
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 DLLTGS 8
D+LTGS
Sbjct: 434 DILTGS 439
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 FYDLLTGS 8
YD +TGS
Sbjct: 1049 LYDKVTGS 1056
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 YDLLTGSM 9
YDL G+M
Sbjct: 2937 YDLYDGNM 2944
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 YDLLTGSM 9
YDL G+M
Sbjct: 2937 YDLYDGNM 2944
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YDLLTGSME 10
YD++ S+E
Sbjct: 267 YDIIKSSLE 275
83|Sequence|411|420|TGSMEIIRGW
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 1 TGSMEIIRGW 10
TGS E +R W
Sbjct: 256 TGSCEKLRTW 265
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 2 GSMEIIRGW 10
GS++ RGW
Sbjct: 555 GSLDRPRGW 563
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 1 TGSMEIIR 8
TG ME+ R
Sbjct: 123 TGGMELTR 130
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 1 TGSMEIIR 8
TG ME+ R
Sbjct: 123 TGGMELTR 130
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 TGSMEIIR 8
TG ME+ R
Sbjct: 123 TGGMELTR 130
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 1 TGSMEIIR 8
TG ME+ R
Sbjct: 123 TGGMELTR 130
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 1 TGSMEIIR 8
TG ME+ R
Sbjct: 123 TGGMELTR 130
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 TGSMEIIR 8
TG ME+ R
Sbjct: 123 TGGMELTR 130
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 1 TGSMEIIR 8
TG ME+ R
Sbjct: 123 TGGMELTR 130
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 1 TGSMEIIR 8
TG ME+ R
Sbjct: 123 TGGMELTR 130
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 TGSMEIIR 8
TG ME+ R
Sbjct: 123 TGGMELTR 130
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 TGSMEIIR 8
TG ME+ R
Sbjct: 123 TGGMELTR 130
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 TGSMEIIR 8
TG ME+ R
Sbjct: 123 TGGMELTR 130
>sp|VP7_ROTH4|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 TGSMEII 7
TGSM+I+
Sbjct: 60 TGSMDIV 66
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 4 MEIIRGW 10
+E+I GW
Sbjct: 459 IELISGW 465
84|Sequence|416|425|IIRGWAEKIP
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 IIRGWAE 7
I+RGW E
Sbjct: 2090 IVRGWGE 2096
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 IIRGWAEKI 9
I++GW E +
Sbjct: 2090 IVKGWGESV 2098
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 IIRGWAE 7
I+RGW E
Sbjct: 222 ILRGWTE 228
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 IIRGWAE 7
I+RGW E
Sbjct: 222 ILRGWTE 228
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 IIRGWAE 7
I+RGW E
Sbjct: 222 ILRGWTE 228
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 IIRGWAEKI 9
+++GW E I
Sbjct: 2092 VVKGWGETI 2100
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IRGWAEKI 9
IRGW K+
Sbjct: 131 IRGWGNKL 138
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 IIRGWAEKI 9
+++GW E +
Sbjct: 2092 VVKGWGETV 2100
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 IIRGWAEKI 9
+++GW E +
Sbjct: 2092 VVKGWGETV 2100
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 IRGWAEKIP 10
IR W ++IP
Sbjct: 339 IRTWFQRIP 347
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 IRGWAEKIP 10
IR W ++IP
Sbjct: 339 IRTWFQRIP 347
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 IRGWAEKIP 10
IR W ++IP
Sbjct: 339 IRTWFQRIP 347
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 IIRGWAE 7
I++GW E
Sbjct: 2092 IVKGWGE 2098
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 IIRGWAE 7
I++GW E
Sbjct: 2095 IVKGWGE 2101
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 IIRGWAE 7
I++GW E
Sbjct: 2090 IVKGWGE 2096
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 IIRGW 5
IIRGW
Sbjct: 100 IIRGW 104
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 RGWAEKIP 10
RGW K+P
Sbjct: 145 RGWWWKLP 152
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 RGWAEKIP 10
RGW K+P
Sbjct: 145 RGWWWKLP 152
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 RGWAEKIP 10
RGW K+P
Sbjct: 145 RGWWWKLP 152
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 RGWAEKIP 10
RGW K+P
Sbjct: 145 RGWWWKLP 152
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 RGWAEKIP 10
RGW K+P
Sbjct: 145 RGWWWKLP 152
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 RGWAEKIP 10
RGW K+P
Sbjct: 145 RGWWWKLP 152
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 RGWAEKIP 10
RGW K+P
Sbjct: 145 RGWWWKLP 152
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IRGWAEK 8
IRGW K
Sbjct: 131 IRGWGNK 137
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IRGWAEK 8
IRGW K
Sbjct: 131 IRGWGNK 137
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IRGWAEK 8
IRGW K
Sbjct: 131 IRGWGNK 137
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IRGWAEK 8
IRGW K
Sbjct: 131 IRGWGNK 137
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 4 GWAEKIP 10
GWA +IP
Sbjct: 1064 GWAMRIP 1070
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 IIRGWAE 7
+++GW E
Sbjct: 2095 VVKGWGE 2101
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 RGWAEKIP 10
+GW K+P
Sbjct: 145 KGWCWKLP 152
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 RGWAEKIP 10
+GW K+P
Sbjct: 145 KGWCWKLP 152
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 4 GWAEKIP 10
GWA +IP
Sbjct: 1064 GWAMRIP 1070
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 2 IRGWA 6
IRGWA
Sbjct: 78 IRGWA 82
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 2 IRGWA 6
IRGWA
Sbjct: 66 IRGWA 70
>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 3 RGWAEKIP 10
+ W +KIP
Sbjct: 340 KSWLQKIP 347
>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 3 RGWAEKIP 10
+ W +KIP
Sbjct: 340 KSWLQKIP 347
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 IIRGWAEK 8
+++ WAEK
Sbjct: 2646 LLKAWAEK 2653
>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 RGWAEKIP 10
+ W +KIP
Sbjct: 340 KSWLQKIP 347
>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 RGWAEKIP 10
+ W +KIP
Sbjct: 340 KSWLQKIP 347
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 2 IRGWA 6
IRGWA
Sbjct: 79 IRGWA 83
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 IIRGWAEK 8
+++ WAEK
Sbjct: 2646 LLKAWAEK 2653
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 2 IRGWA 6
IRGWA
Sbjct: 94 IRGWA 98
>sp|NRAM_I82A2|NEURAMINIDASE A virus (strain A/Camel/Mongolia/1982
Query: 2 IRGWA 6
IRGWA
Sbjct: 77 IRGWA 81
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 IIRGW 5
++RGW
Sbjct: 97 VVRGW 101
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 5 WAEKIP 10
W E++P
Sbjct: 1380 WGEEVP 1385
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 5 WAEKIP 10
W EK P
Sbjct: 146 WTEKTP 151
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 RGWAEKIP 10
+GW K+P
Sbjct: 145 KGWWWKLP 152
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 RGWAEKIP 10
+GW K+P
Sbjct: 145 KGWWWKLP 152
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 RGWAEKIP 10
+GW K+P
Sbjct: 145 KGWWWKLP 152
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 RGWAEKIP 10
+GW K+P
Sbjct: 145 KGWWWKLP 152
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 RGWAEKI 9
R W EK+
Sbjct: 1222 RSWLEKV 1228
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 2 IRGWAEKI 9
++ W EKI
Sbjct: 229 VKDWPEKI 236
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 2 IRGWAEKI 9
++ W EKI
Sbjct: 229 VKDWPEKI 236
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 IRGWAEKI 9
++ W EKI
Sbjct: 229 VKDWPEKI 236
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 2 IRGWAEKI 9
++ W EKI
Sbjct: 229 VKDWPEKI 236
>sp|YVAE_VACCC|UNCHARACTERIZED 18.2 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 WAEKIP 10
+AEKIP
Sbjct: 135 YAEKIP 140
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 2 IRGWAEKI 9
++ W+E+I
Sbjct: 229 VKDWSERI 236
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WAEKIP 10
WA+ IP
Sbjct: 3349 WAQNIP 3354
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WAEKIP 10
WA+ IP
Sbjct: 3349 WAQNIP 3354
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 RGWAEKIP 10
R W +IP
Sbjct: 1028 RSWYNRIP 1035
85|Sequence|421|430|AEKIPGFADL
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 4 IPGFADL 10
IPGFA++
Sbjct: 971 IPGFAEM 977
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 4 IPGFADL 10
IPGFA++
Sbjct: 971 IPGFAEM 977
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 4 IPGFADL 10
IPGFA++
Sbjct: 971 IPGFAEM 977
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 AEKIPGF 7
AEKIP F
Sbjct: 151 AEKIPRF 157
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 4 IPGFAD 9
IPGF D
Sbjct: 479 IPGFLD 484
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 AEKIPGF 7
+EK PGF
Sbjct: 179 SEKPPGF 185
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 AEKIPGF 7
+EK PGF
Sbjct: 179 SEKPPGF 185
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 EKIPGF 7
EKIPG
Sbjct: 863 EKIPGL 868
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 EKIPGFA 8
EK+ GFA
Sbjct: 4409 EKVAGFA 4415
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 4 IPGFADL 10
IP FAD+
Sbjct: 196 IPEFADI 202
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 KIPGF 7
K+PGF
Sbjct: 9 KVPGF 13
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 KIPGF 7
K+PGF
Sbjct: 9 KVPGF 13
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 IPGFADL 10
IP FA+L
Sbjct: 404 IPNFAEL 410
86|Sequence|426|435|GFADLPKADQ
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 GFADLPKA 8
G++DLP+A
Sbjct: 1087 GWSDLPEA 1094
87|Sequence|431|440|PKADQDLLFE
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 2 KADQDLLF 9
+AD+DLLF
Sbjct: 354 QADEDLLF 361
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PKADQD 6
PK DQD
Sbjct: 657 PKGDQD 662
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 1 PKADQD 6
PK DQD
Sbjct: 657 PKGDQD 662
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KADQDLLF 9
+AD D+LF
Sbjct: 341 QADADVLF 348
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 KADQDLL 8
KAD+D+L
Sbjct: 1509 KADKDVL 1515
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 KADQDLL 8
KAD+D+L
Sbjct: 1509 KADKDVL 1515
88|Sequence|436|445|DLLFESAFLE
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 1 DLLFESAFLE 10
D+LF+ FLE
Sbjct: 113 DVLFDVQFLE 122
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DLLFESAFLE 10
D+LF+ FLE
Sbjct: 53 DVLFDVQFLE 62
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LLFESAFL 9
L+E+AFL
Sbjct: 3605 FLYENAFL 3612
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 LLFESAFL 9
L+E+AFL
Sbjct: 3605 FLYENAFL 3612
89|Sequence|441|450|SAFLELFVLR
>sp|VP40_EBOZM|MATRIX protein VP40|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 AFLELFVL 9
AFL+ FVL
Sbjct: 156 AFLQEFVL 163
>sp|VP40_EBOZ5|MATRIX protein VP40|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 AFLELFVL 9
AFL+ FVL
Sbjct: 156 AFLQEFVL 163
>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 AFLELFVL 9
AFL+ FVL
Sbjct: 156 AFLQEFVL 163
>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 AFLELFVL 9
AFL+ FVL
Sbjct: 156 AFLQEFVL 163
>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 AFLELFVL 9
AFL+ FVL
Sbjct: 156 AFLQEFVL 163
>sp|VP40_EBOG4|MATRIX protein VP40|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 AFLELFVL 9
AFL+ FVL
Sbjct: 156 AFLQEFVL 163
>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)
Query: 2 AFLELFVLR 10
+FLE F++R
Sbjct: 420 SFLEKFIMR 428
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 2 AFLELFVLR 10
+FLE F++R
Sbjct: 420 SFLEKFIMR 428
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 AFLELFVLR 10
+FLE F++R
Sbjct: 420 SFLEKFIMR 428
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 1 SAFLELFVLR 10
S FL+ F+LR
Sbjct: 156 SLFLQFFMLR 165
>sp|VPK2_VACCP|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 AFLELFVLR 10
+FLE F++R
Sbjct: 386 SFLEKFIMR 394
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 2 AFLELFVLR 10
+FLE F++R
Sbjct: 420 SFLEKFIMR 428
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 AFLELFVLR 10
+FLE F++R
Sbjct: 420 SFLEKFIMR 428
90|Sequence|446|455|LFVLRLAYRS
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 LFVLRLAYRS 10
LF+L LAY S
Sbjct: 2117 LFMLPLAYFS 2126
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 LFVLRLAYRS 10
LF+L LAY S
Sbjct: 2117 LFMLPLAYFS 2126
91|Sequence|451|460|LAYRSNPVEG
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 1 LAYRSNPV 8
L+Y SNPV
Sbjct: 448 LSYMSNPV 455
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LAYRSNPV 8
L+Y SNPV
Sbjct: 448 LSYMSNPV 455
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LAYRSNPVE 9
+AY +NP E
Sbjct: 319 VAYVANPTE 327
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LAYRSNPVE 9
+AY +NP E
Sbjct: 319 VAYVANPTE 327
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 1 LAYRSNPVEG 10
+ +RSN V+G
Sbjct: 437 IRFRSNKVQG 446
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 3 YRSNPVE 9
Y+S+P+E
Sbjct: 126 YKSSPIE 132
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 YRSNPV 8
YR NP+
Sbjct: 2041 YRDNPI 2046
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 2 AYRSNPVEG 10
A++ NP++G
Sbjct: 63 AHQLNPIDG 71
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LAYRSNP 7
L YR NP
Sbjct: 337 LRYRQNP 343
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 6 NPVEG 10
NPVEG
Sbjct: 1241 NPVEG 1245
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 1 LAYRSNPVE 9
L+YR +P++
Sbjct: 380 LSYRPSPIK 388
>sp|REV_HV1H2|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 LAYRSNP 7
L Y+SNP
Sbjct: 21 LLYQSNP 27
>sp|REV_HV1A2|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 LAYRSNP 7
L Y+SNP
Sbjct: 21 LLYQSNP 27
>sp|REV_HV1V9|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 LAYRSNP 7
L Y+SNP
Sbjct: 21 LLYQSNP 27
92|Sequence|456|465|NPVEGKLIFC
>sp|VE7_HPV04|PROTEIN E7|Human papillomavirus 4
Query: 3 VEGKLIFC 10
VEGKL FC
Sbjct: 80 VEGKLTFC 87
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 PVEGKLIFC 10
PV GKL+ C
Sbjct: 463 PVHGKLVKC 471
>sp|VE7_HPV65|PROTEIN E7|Human papillomavirus 65
Query: 3 VEGKLIFC 10
V+GKL FC
Sbjct: 79 VDGKLTFC 86
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PVEGKLI 8
P+EGK++
Sbjct: 404 PIEGKVV 410
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PVEGKLI 8
P+EGK++
Sbjct: 404 PIEGKVV 410
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PVEGKLI 8
P+EGK++
Sbjct: 404 PIEGKVV 410
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 NPVEGK 6
NPVEG+
Sbjct: 1241 NPVEGE 1246
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 GKLIFC 10
G+L+FC
Sbjct: 374 GRLLFC 379
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 GKLIFC 10
G+L+FC
Sbjct: 374 GRLLFC 379
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 GKLIFC 10
G+L+FC
Sbjct: 374 GRLLFC 379
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 GKLIFC 10
G+L+FC
Sbjct: 374 GRLLFC 379
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 GKLIFC 10
G+L+FC
Sbjct: 374 GRLLFC 379
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 GKLIFC 10
G+L+FC
Sbjct: 374 GRLLFC 379
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 GKLIFC 10
G+L+FC
Sbjct: 374 GRLLFC 379
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 GKLIFC 10
G+L+FC
Sbjct: 374 GRLLFC 379
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 GKLIFC 10
G+L+FC
Sbjct: 353 GRLLFC 358
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 GKLIFC 10
G+L+FC
Sbjct: 374 GRLLFC 379
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 GKLIFC 10
G+L+FC
Sbjct: 374 GRLLFC 379
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 GKLIFC 10
G+L+FC
Sbjct: 374 GRLLFC 379
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 PVEGKLIFC 10
PV G ++ C
Sbjct: 1435 PVSGDVVVC 1443
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 5 GKLIFC 10
GKLI C
Sbjct: 446 GKLIIC 451
93|Sequence|461|470|KLIFCNGVVL
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 IFCNGVVL 10
IFC GVV
Sbjct: 883 IFCPGVVF 890
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 IFCNGVVL 10
IFC GVV
Sbjct: 883 IFCPGVVF 890
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 IFCNGV 8
++CNGV
Sbjct: 438 VYCNGV 443
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 2 LIFCNGVV 9
L+ CNG+V
Sbjct: 412 LVKCNGMV 419
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 2 LIFCNGVV 9
L+ CNG+V
Sbjct: 397 LVKCNGMV 404
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 IFCNGV 8
++CNGV
Sbjct: 443 VYCNGV 448
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 IFCNGVVL 10
IFC GV+
Sbjct: 883 IFCPGVLF 890
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 KLIFCN 6
K+I+CN
Sbjct: 1660 KIIYCN 1665
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 4 FCNGVV 9
FC G+V
Sbjct: 824 FCQGIV 829
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 CNGVV 9
CNGV+
Sbjct: 103 CNGVI 107
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 5 CNGVV 9
CNGV+
Sbjct: 103 CNGVI 107
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 CNGVV 9
CNGV+
Sbjct: 103 CNGVI 107
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 5 CNGVV 9
CNGV+
Sbjct: 103 CNGVI 107
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 5 CNGVV 9
CNGV+
Sbjct: 103 CNGVI 107
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 5 CNGVV 9
CNGV+
Sbjct: 103 CNGVI 107
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 IFCNGV 8
+FC+GV
Sbjct: 1594 VFCDGV 1599
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 IFCNGV 8
+FC+GV
Sbjct: 1594 VFCDGV 1599
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 KLIFCNGVVL 10
KLI CN V+
Sbjct: 190 KLINCNTSVI 199
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 2 LIFCN 6
L+FCN
Sbjct: 644 LLFCN 648
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 2 LIFCN 6
L+FCN
Sbjct: 644 LLFCN 648
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LIFCN 6
L+FCN
Sbjct: 644 LLFCN 648
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 CNGVVL 10
C GVVL
Sbjct: 818 CGGVVL 823
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 5 CNGVVL 10
C GVVL
Sbjct: 818 CGGVVL 823
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 CNGVVL 10
C GVVL
Sbjct: 818 CGGVVL 823
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 CNGVVL 10
C GVVL
Sbjct: 818 CGGVVL 823
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 LIFCNGVVL 10
L+F NG V+
Sbjct: 780 LLFPNGTVI 788
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 LIFCNGVVL 10
L+F NG V+
Sbjct: 780 LLFPNGTVI 788
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 LIFCNGVVL 10
L+F NG V+
Sbjct: 780 LLFPNGTVI 788
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 LIFCNGVVL 10
L+F NG V+
Sbjct: 780 LLFPNGTVI 788
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 3 IFCNGV 8
++CNG+
Sbjct: 443 VYCNGM 448
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 IFCNGV 8
++CNG+
Sbjct: 443 VYCNGM 448
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 3 IFCNGV 8
++CNG+
Sbjct: 443 VYCNGM 448
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 KLIFCNGVVL 10
+L+ C+ +VL
Sbjct: 235 ELVLCSEIVL 244
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 KLIFCNGVVL 10
+L+ C+ +VL
Sbjct: 235 ELVLCSEIVL 244
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KLIFCNGVVL 10
+L+ C+ +VL
Sbjct: 235 ELVLCSEIVL 244
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 KLIFCNGVVL 10
+L+ C+ +VL
Sbjct: 235 ELVLCSEIVL 244
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 KLIFCNGVVL 10
+L+ C+ +VL
Sbjct: 235 ELVLCSEIVL 244
94|Sequence|466|475|NGVVLHRLQC
>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)
Query: 2 GVVLHRLQ 9
GV++HRL+
Sbjct: 293 GVIVHRLE 300
>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)
Query: 2 GVVLHRLQ 9
GV++HRL+
Sbjct: 293 GVIVHRLE 300
>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)
Query: 2 GVVLHRLQ 9
GV++HRL+
Sbjct: 293 GVIVHRLE 300
>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)
Query: 2 GVVLHRLQ 9
GV++HRL+
Sbjct: 293 GVIVHRLE 300
>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)
Query: 2 GVVLHRLQ 9
GV++HRL+
Sbjct: 293 GVIVHRLE 300
>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)
Query: 2 GVVLHRLQ 9
GV++HRL+
Sbjct: 293 GVIVHRLE 300
>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 GVVLHRLQ 9
GV++HRL+
Sbjct: 293 GVIVHRLE 300
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 GVVLHRLQ 9
GV++HRL+
Sbjct: 293 GVIVHRLE 300
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 2 GVVLHRLQ 9
GV++HRL+
Sbjct: 293 GVIVHRLE 300
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 1 NGVVLHRLQ 9
+GVVL RL+
Sbjct: 411 DGVVLERLE 419
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 5 LHRLQC 10
LHR QC
Sbjct: 580 LHRSQC 585
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 GVVLHRLQC 10
G V+H L C
Sbjct: 120 GRVIHTLTC 128
>sp|US32_HCMVA|UNCHARACTERIZED protein HHRF7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 LHRLQC 10
LHRL C
Sbjct: 63 LHRLWC 68
>sp|US32_HCMVM|PROTEIN US32|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 LHRLQC 10
LHRL C
Sbjct: 63 LHRLWC 68
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 NGVVLHRL 8
NG V+H L
Sbjct: 784 NGTVIHLL 791
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 NGVVLHRL 8
NG V+H L
Sbjct: 784 NGTVIHLL 791
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 NGVVLHRL 8
NG V+H L
Sbjct: 784 NGTVIHLL 791
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 NGVVLHRL 8
NG V+H L
Sbjct: 784 NGTVIHLL 791
95|Sequence|471|480|HRLQCVRGFG
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 HRLQCVRGF 9
HR QC +G
Sbjct: 581 HRSQCFKGL 589
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 QCVRGF 9
QC+RG+
Sbjct: 666 QCIRGY 671
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 HRLQCVRG 8
H L CV+G
Sbjct: 559 HNLSCVQG 566
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 HRLQCVRG 8
H L CV+G
Sbjct: 559 HNLSCVQG 566
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 HRLQCVRG 8
H L CV+G
Sbjct: 559 HNLSCVQG 566
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 HRLQCVRG 8
H L CV+G
Sbjct: 559 HNLSCVQG 566
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 QCVRGFG 10
QCV FG
Sbjct: 812 QCVTAFG 818
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 LQCVRGFG 10
++C R FG
Sbjct: 1382 IRCARAFG 1389
Query: 1 HRLQCVR 7
H L+C R
Sbjct: 795 HHLRCAR 801
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 5 CVRGFG 10
CV GFG
Sbjct: 1216 CVDGFG 1221
Query: 4 QCVRG 8
QC+RG
Sbjct: 1095 QCIRG 1099
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 CVRGFG 10
CV GFG
Sbjct: 1216 CVDGFG 1221
Query: 4 QCVRG 8
QC+RG
Sbjct: 1095 QCIRG 1099
Query: 2 RLQCVRGF 9
R++C GF
Sbjct: 5335 RVECYSGF 5342
Query: 1 HRLQCVRGFG 10
H L C R F
Sbjct: 5662 HSLFCTRDFA 5671
>sp|VE6_HPV54|PROTEIN E6|Human papillomavirus type 54
Query: 2 RLQCVRGF 9
R CVRG+
Sbjct: 126 RFHCVRGY 133
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 QCVRG 8
QC+RG
Sbjct: 719 QCIRG 723
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 QCVRG 8
QC+RG
Sbjct: 719 QCIRG 723
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 LQCVRGF 9
L C RGF
Sbjct: 2010 LSCQRGF 2016
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 LQCVRGF 9
L C RGF
Sbjct: 2011 LSCQRGF 2017
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 RLQCVRGF 9
R++C GF
Sbjct: 5310 RVECYSGF 5317
Query: 1 HRLQCVRGFG 10
H L C R F
Sbjct: 5637 HSLFCTRDFA 5646
Query: 1 HRLQCV 6
H+L+C+
Sbjct: 1008 HQLECI 1013
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 HRLQCVRG 8
HR C+ G
Sbjct: 564 HRQSCING 571
>sp|VE7_HPV68|PROTEIN E7|Human papillomavirus 68
Query: 1 HRLQCV 6
HR+QC+
Sbjct: 63 HRIQCL 68
>sp|VEMP_MERS1|ENVELOPE small membrane protein|Middle East respiratory syndrome-related
Query: 3 LQCVRGF 9
+QC+ GF
Sbjct: 41 VQCMTGF 47
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 HRLQCVRG 8
HR CV G
Sbjct: 52 HRKDCVVG 59
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 HRLQCVR 7
H LQC +
Sbjct: 1838 HNLQCAQ 1844
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 HRLQCV 6
H+L+C+
Sbjct: 1008 HQLECI 1013
96|Sequence|476|485|VRGFGEWIDS
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 VRGFGEWID 9
+ FGEWI+
Sbjct: 2157 IESFGEWIE 2165
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 2 RGFGEW 7
RGF EW
Sbjct: 739 RGFAEW 744
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 GEWIDS 10
GEW+DS
Sbjct: 157 GEWVDS 162
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 GEWIDS 10
GEW+DS
Sbjct: 157 GEWVDS 162
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 GEWIDS 10
GEW+DS
Sbjct: 157 GEWVDS 162
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 GEWIDS 10
GEW+DS
Sbjct: 157 GEWVDS 162
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 GEWIDS 10
GEW+DS
Sbjct: 157 GEWVDS 162
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 5 GEWIDS 10
GEW+DS
Sbjct: 157 GEWVDS 162
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 VRGFGEW 7
V G+GEW
Sbjct: 101 VVGYGEW 107
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 RGFGEW 7
RG GEW
Sbjct: 1111 RGHGEW 1116
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 RGFGEW 7
RG GEW
Sbjct: 1111 RGHGEW 1116
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 GEWIDS 10
GEW+DS
Sbjct: 157 GEWVDS 162
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 VRGFGEWI 8
V GFG WI
Sbjct: 1131 VGGFGTWI 1138
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 VRGFGEW 7
+ G+GEW
Sbjct: 101 IVGYGEW 107
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 VRGFGEW 7
+ G+GEW
Sbjct: 101 IVGYGEW 107
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 VRGFGEW 7
+ G+GEW
Sbjct: 101 IVGYGEW 107
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VRGFGEWID 9
VRGFG+ ++
Sbjct: 28 VRGFGDSVE 36
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VRGFGEWID 9
VRGFG+ ++
Sbjct: 28 VRGFGDSVE 36
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VRGFGEWID 9
VRGFG+ ++
Sbjct: 28 VRGFGDSVE 36
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VRGFGEWID 9
VRGFG+ ++
Sbjct: 28 VRGFGDSVE 36
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 2 RGFGEWID 9
+ F EW+D
Sbjct: 1658 KTFSEWLD 1665
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 RGFGEWID 9
+ F EW+D
Sbjct: 1658 KTFSEWLD 1665
Query: 1 VRGFGEWI 8
VRG+GE +
Sbjct: 2091 VRGWGECV 2098
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 RGFGEWID 9
+ F EW+D
Sbjct: 1658 KTFSEWLD 1665
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 3 GFGEW 7
GFG+W
Sbjct: 12 GFGDW 16
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 VRGFGEWID 9
V G+G W D
Sbjct: 101 VVGYGRWPD 109
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 VRGFGEW 7
V GF EW
Sbjct: 3166 VDGFNEW 3172
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 RGFGEWI 8
+G+ EW+
Sbjct: 655 KGYAEWV 661
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 RGFGEWI 8
R GEW+
Sbjct: 601 RNLGEWV 607
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 3 GFGEW 7
GFG+W
Sbjct: 14 GFGDW 18
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 VRGFGEW 7
V GF EW
Sbjct: 3166 VDGFNEW 3172
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 4 FGEWIDS 10
FGE IDS
Sbjct: 398 FGELIDS 404
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 4 FGEWIDS 10
FGE IDS
Sbjct: 398 FGELIDS 404
Query: 6 EWIDS 10
+WIDS
Sbjct: 1662 QWIDS 1666
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 3 GFGEW 7
GFG+W
Sbjct: 14 GFGDW 18
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 3 GFGEW 7
GFG+W
Sbjct: 12 GFGDW 16
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 VRGFGEWI 8
+RG+ WI
Sbjct: 2104 LRGYNRWI 2111
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 3 GFGEW 7
GFG+W
Sbjct: 12 GFGDW 16
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 VRGFGEWI 8
+RG+ WI
Sbjct: 2103 LRGYNRWI 2110
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 VRGFGEWI 8
+RG+ WI
Sbjct: 2104 LRGYNRWI 2111
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 VRGFGEWID 9
V G+G W D
Sbjct: 101 VVGYGTWPD 109
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VRGFGEWIDS 10
V G GE +DS
Sbjct: 690 VDGLGELMDS 699
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VRGFGEWIDS 10
V G GE +DS
Sbjct: 690 VDGLGELMDS 699
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VRGFGEWIDS 10
V G GE +DS
Sbjct: 690 VDGLGELMDS 699
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 4 FGEWID 9
FG+W++
Sbjct: 2163 FGDWVE 2168
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 FGEWIDS 10
FGE IDS
Sbjct: 399 FGEIIDS 405
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 4 FGEWIDS 10
FGE IDS
Sbjct: 398 FGEVIDS 404
>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GFGEWID 9
G G WID
Sbjct: 241 GVGLWID 247
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 4 FGEWID 9
FG+W++
Sbjct: 2161 FGDWLE 2166
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 6 EWIDS 10
EWID+
Sbjct: 628 EWIDT 632
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 VRGFGEWID 9
V G+G W D
Sbjct: 101 VVGYGVWPD 109
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 VRGFGEWID 9
V G+G W D
Sbjct: 101 VVGYGVWPD 109
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 VRGFGEWID 9
V G+G W D
Sbjct: 101 VVGYGVWPD 109
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 VRGFGEWID 9
V G+G W D
Sbjct: 101 VVGYGVWPD 109
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 VRGFGEWID 9
V G+G W D
Sbjct: 101 VVGYGVWPD 109
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 1 VRGFG 5
VRGFG
Sbjct: 97 VRGFG 101
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 1 VRGFG 5
VRGFG
Sbjct: 97 VRGFG 101
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 FGEWID 9
FG W D
Sbjct: 655 FGNWFD 660
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 RGFGEWID 9
+G+ E++D
Sbjct: 1518 KGYAEYVD 1525
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 FGEWID 9
FG W D
Sbjct: 667 FGNWFD 672
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 FGEWID 9
FG W D
Sbjct: 666 FGNWFD 671
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 VRGFGEWIDS 10
+R F WI +
Sbjct: 400 LRSFSSWIQN 409
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 VRGFGEWIDS 10
+R F WI +
Sbjct: 400 LRSFSSWIQN 409
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 VRGFGEWIDS 10
+R F WI +
Sbjct: 400 LRSFSSWIQN 409
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 FGEWID 9
FG W D
Sbjct: 664 FGNWFD 669
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 FGEWID 9
FG W D
Sbjct: 656 FGNWFD 661
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 FGEWID 9
FG W D
Sbjct: 654 FGNWFD 659
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 VRGFGEWID 9
V+G+GE I+
Sbjct: 2093 VKGWGETIN 2101
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 FGEWID 9
FG W D
Sbjct: 656 FGNWFD 661
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 FGEWID 9
FG W D
Sbjct: 658 FGNWFD 663
>sp|TAT_HV2UC|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 2 RGFGEWID 9
+G G W D
Sbjct: 70 KGLGIWYD 77
>sp|TAT_HV2NZ|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 2 RGFGEWID 9
+G G W D
Sbjct: 70 KGLGIWYD 77
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 FGEWID 9
+G+W D
Sbjct: 4620 YGQWYD 4625
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 FGEWID 9
+G+W D
Sbjct: 4640 YGQWYD 4645
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 FGEWID 9
+G+W D
Sbjct: 4670 YGQWYD 4675
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 FGEWIDS 10
FG WI +
Sbjct: 95 FGTWIQN 101
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 FGEWIDS 10
FG WI +
Sbjct: 95 FGTWIQN 101
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 VRGFGEWI 8
++G+ WI
Sbjct: 2103 LKGYNRWI 2110
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 GFGEWI 8
G G WI
Sbjct: 2018 GIGNWI 2023
97|Sequence|481|490|EWIDSIVEFS
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EWIDSIVE 8
EW D ++E
Sbjct: 814 EWTDRVIE 821
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 WIDSIVE 8
W DS+VE
Sbjct: 1020 WSDSVVE 1026
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 2 WIDSIVEFS 10
W+DSI + S
Sbjct: 324 WLDSIYQES 332
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 2 WIDSI 6
WIDSI
Sbjct: 209 WIDSI 213
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 2 WIDSI 6
WIDSI
Sbjct: 209 WIDSI 213
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 WIDSI 6
WIDSI
Sbjct: 209 WIDSI 213
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 2 WIDSI 6
WIDSI
Sbjct: 209 WIDSI 213
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 WIDSI 6
WIDSI
Sbjct: 209 WIDSI 213
>sp|A28_MCV1|ENVELOPE protein A28 homolog|Molluscum contagiosum virus subtype 1
Query: 1 EWIDSIVEFS 10
E DSI+EF+
Sbjct: 28 ENFDSILEFN 37
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 EWIDSI 6
EW DSI
Sbjct: 1241 EWADSI 1246
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 WIDSIVEFS 10
W+DSI + S
Sbjct: 324 WLDSIYQES 332
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 2 WIDSIVEFS 10
+IDSIV+ S
Sbjct: 58 YIDSIVKSS 66
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 2 WIDSIVEFS 10
+IDSIV+ S
Sbjct: 58 YIDSIVKSS 66
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 WIDSIVE 8
W+DSI +
Sbjct: 324 WLDSIYQ 330
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 WIDSIVE 8
W+DSI +
Sbjct: 324 WLDSIYQ 330
98|Sequence|486|495|IVEFSSNLQN
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 IVEFSSNLQN 10
I EF SNL N
Sbjct: 1214 ITEFFSNLGN 1223
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 IVEFSSNLQN 10
I EF SNL N
Sbjct: 1211 ITEFFSNLGN 1220
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 EFSSNLQN 10
EFSSN+ N
Sbjct: 5562 EFSSNVAN 5569
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 EFSSNLQN 10
EFSSN+ N
Sbjct: 5585 EFSSNVAN 5592
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 VEFSSN 7
VEFSSN
Sbjct: 562 VEFSSN 567
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 VEFSSN 7
VEFSSN
Sbjct: 558 VEFSSN 563
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 VEFSSN 7
VEFSSN
Sbjct: 562 VEFSSN 567
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 IVEFSSNLQ 9
+V F+SNL+
Sbjct: 627 VVAFASNLR 635
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 IVEFSSNLQ 9
+V F+SNL+
Sbjct: 627 VVAFASNLR 635
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 3 EFSSNLQN 10
EFS N+QN
Sbjct: 244 EFSINIQN 251
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EFSSNLQN 10
EF NL+N
Sbjct: 2167 EFEQNLEN 2174
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EFSSNLQN 10
EF NL+N
Sbjct: 2167 EFEQNLEN 2174
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EFSSNLQN 10
EF NL+N
Sbjct: 2167 EFEQNLEN 2174
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EFSSNLQN 10
EF NL+N
Sbjct: 2167 EFEQNLEN 2174
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EFSSNLQN 10
EF NL+N
Sbjct: 2167 EFEQNLEN 2174
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EFSSNLQN 10
EF NL+N
Sbjct: 2165 EFEQNLEN 2172
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EFSSNLQN 10
EF NL+N
Sbjct: 2167 EFEQNLEN 2174
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EFSSNLQN 10
EF NL+N
Sbjct: 2168 EFEQNLEN 2175
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EFSSNLQN 10
EF NL+N
Sbjct: 2168 EFEQNLEN 2175
99|Sequence|491|500|SNLQNMNIDI
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 LQNMNIDI 10
L+N+NIDI
Sbjct: 6531 LRNLNIDI 6538
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 LQNMNIDI 10
L+N+NIDI
Sbjct: 6551 LRNLNIDI 6558
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 LQNMNIDI 10
L+N+NIDI
Sbjct: 6581 LRNLNIDI 6588
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 NLQNMNIDI 10
N ++MN+DI
Sbjct: 594 NFKSMNVDI 602
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 SNLQNMNIDI 10
+NLQN+ I++
Sbjct: 868 ANLQNLEIEV 877
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 NLQNMNIDI 10
N ++MN+DI
Sbjct: 594 NFRSMNVDI 602
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 2 NLQNMNIDI 10
NLQ++++DI
Sbjct: 374 NLQDLSLDI 382
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 NLQNMNIDI 10
NLQ++++DI
Sbjct: 374 NLQDLSLDI 382
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LQNMNIDI 10
+N+NID+
Sbjct: 6493 FRNLNIDV 6500
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 SNLQNMNI 8
SNL N+NI
Sbjct: 635 SNLTNLNI 642
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 SNLQNMNI 8
SNL N+NI
Sbjct: 635 SNLTNLNI 642
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 SNLQNMNI 8
SNL N+NI
Sbjct: 635 SNLTNLNI 642
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SNLQNMNI 8
SNL N+NI
Sbjct: 635 SNLTNLNI 642
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SNLQNMNI 8
SNL N+NI
Sbjct: 635 SNLTNLNI 642
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 SNLQNMNID 9
SN+Q N+D
Sbjct: 26 SNIQPQNVD 34
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 SNLQNMNIDI 10
S++ NM+ID+
Sbjct: 175 SSISNMDIDM 184
100|Sequence|496|505|MNIDISAFSC
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 ISAFSC 10
+SAF+C
Sbjct: 203 VSAFAC 208
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 ISAFSC 10
+SAF+C
Sbjct: 203 VSAFAC 208
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 IDISAFSC 10
+D+S F+C
Sbjct: 6704 LDLSKFNC 6711
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 3 IDISAFSC 10
IDIS+ SC
Sbjct: 416 IDISSSSC 423
101|Sequence|501|510|SAFSCIAALA
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 1 SAFSCIAALA 10
+AF C+ ALA
Sbjct: 662 AAFVCLVALA 671
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 1 SAFSCIAALA 10
+AF C+ ALA
Sbjct: 660 AAFVCLVALA 669
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AFSCIA 7
+FSCIA
Sbjct: 754 SFSCIA 759
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AFSCIA 7
+FSCIA
Sbjct: 754 SFSCIA 759
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AFSCIA 7
+FSCIA
Sbjct: 754 SFSCIA 759
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AFSCIA 7
+FSCIA
Sbjct: 754 SFSCIA 759
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AFSCIA 7
+FSCIA
Sbjct: 754 SFSCIA 759
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 4 SCIAAL 9
SC+AAL
Sbjct: 298 SCLAAL 303
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 1 SAFSCIAA 8
SAF C+ A
Sbjct: 11 SAFLCVRA 18
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 1 SAFSCIAA 8
SAF C+ A
Sbjct: 11 SAFLCVRA 18
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 1 SAFSCIAA 8
SAF C+ A
Sbjct: 11 SAFLCVRA 18
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 1 SAFSCIAA 8
SAF C+ A
Sbjct: 11 SAFLCVRA 18
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 1 SAFSCIAA 8
SAF C+ A
Sbjct: 11 SAFLCVRA 18
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 1 SAFSCIAA 8
SAF C+ A
Sbjct: 11 SAFLCVRA 18
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 1 SAFSCIAA 8
SAF C+ A
Sbjct: 11 SAFLCVRA 18
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 1 SAFSCIAA 8
SAF C+ A
Sbjct: 11 SAFLCVRA 18
102|Sequence|506|515|IAALAMVTER
***** No hits found ******
103|Sequence|511|520|MVTERHGLKE
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 MVTERHGLKE 10
++T +HGLKE
Sbjct: 12 LITPQHGLKE 21
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 MVTERHGLK 9
++ RHGLK
Sbjct: 1879 LLNSRHGLK 1887
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 3 TERHGL 8
T+RHGL
Sbjct: 375 TQRHGL 380
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 3 TERHGL 8
T+RHGL
Sbjct: 375 TQRHGL 380
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 MVTERHGLK 9
++ RHGLK
Sbjct: 1903 LLGSRHGLK 1911
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 VTERHGLK 9
+ E HGLK
Sbjct: 961 IIENHGLK 968
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 MVTERHGLK 9
++ RHGLK
Sbjct: 1903 LLGARHGLK 1911
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 VTERH 6
VTERH
Sbjct: 457 VTERH 461
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 VTERH 6
VTERH
Sbjct: 457 VTERH 461
104|Sequence|516|525|HGLKEPKRVE
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 2 GLKEPKRVE 10
GLKE KR+E
Sbjct: 389 GLKEYKRME 397
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 GLKEPKRVE 10
GLKE KR+E
Sbjct: 389 GLKEYKRME 397
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GLKEPKRVE 10
GLKE KR+E
Sbjct: 389 GLKEYKRME 397
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 HGLKEPKRV 9
HG+ +PK+V
Sbjct: 1500 HGVTKPKQV 1508
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 HGLKEPKRV 9
HG+ +PK+V
Sbjct: 1500 HGVTKPKQV 1508
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 HGLKEPKRV 9
HG+ +PK+V
Sbjct: 1500 HGVTKPKQV 1508
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 HGLKEPKRV 9
HG+ +PK+V
Sbjct: 1500 HGVTKPKQV 1508
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 HGLKEPKRV 9
HG+ +PK+V
Sbjct: 1500 HGVTKPKQV 1508
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 HGLKEPKRV 9
HG+ +PK+V
Sbjct: 1334 HGVTKPKQV 1342
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 HGLKEPKRV 9
HG+ +PK+V
Sbjct: 1500 HGVTKPKQV 1508
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 HGLKEPKRV 9
HG+ +PK+V
Sbjct: 1498 HGVTKPKQV 1506
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 HGLKEPKRV 9
HG+ +PK+V
Sbjct: 1500 HGVTKPKQV 1508
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 HGLKEPKRVE 10
H +K P RVE
Sbjct: 585 HPVKAPSRVE 594
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 HGLKEPKRVE 10
H +K P RVE
Sbjct: 585 HPVKAPSRVE 594
>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HGLKEPKR 8
HG+++P+R
Sbjct: 172 HGMEDPER 179
>sp|NEF_HV1SC|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HGLKEPKR 8
HG+++P+R
Sbjct: 171 HGMEDPER 178
>sp|LEAD_ADE05|I-LEADER protein|Human adenovirus C serotype 5
Query: 1 HGLKEPKR 8
HGL+ P+R
Sbjct: 130 HGLELPRR 137
>sp|LEAD_ADE02|I-LEADER protein|Human adenovirus C serotype 2
Query: 1 HGLKEPKR 8
HGL+ P+R
Sbjct: 130 HGLELPRR 137
>sp|NEF_HV1V9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HGLKEPKR 8
HG+++P+R
Sbjct: 172 HGIEDPER 179
>sp|NEF_HV1LW|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HGLKEPKR 8
HG+ +P+R
Sbjct: 171 HGMDDPER 178
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 HGLKEP 6
+GLKEP
Sbjct: 904 NGLKEP 909
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HGLKEPKRVE 10
HGL+ R+E
Sbjct: 326 HGLRRAARLE 335
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 GLKEPKRVE 10
G+K+P +VE
Sbjct: 2043 GVKKPFKVE 2051
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 GLKEPKRVE 10
G+K+P +VE
Sbjct: 2043 GVKKPFKVE 2051
>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HGLKEPKR 8
HG+ +P+R
Sbjct: 171 HGMDDPER 178
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HGLKEPKR 8
HG+ +P+R
Sbjct: 173 HGMDDPER 180
>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HGLKEPKR 8
HG+ +P+R
Sbjct: 183 HGMDDPER 190
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HGLKEPKR 8
HG+ +P+R
Sbjct: 170 HGMDDPER 177
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HGLKEPKRVE 10
HGL+ R+E
Sbjct: 326 HGLRRAARLE 335
>sp|NEF_HV1Y2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HGLKEPKR 8
HG+ +P+R
Sbjct: 180 HGMDDPER 187
>sp|NEF_HV1BR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HGLKEPKR 8
HG+ +P+R
Sbjct: 171 HGMDDPER 178
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 LKEPKRVE 10
LK P R+E
Sbjct: 1837 LKTPMRIE 1844
>sp|NEF_HV1H2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HGLKEPKR 8
HG+ +P+R
Sbjct: 171 HGMDDPER 178
>sp|NEF_HV1B1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HGLKEPKR 8
HG+ +P+R
Sbjct: 171 HGMDDPER 178
>sp|NEF_HV112|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HGLKEPKR 8
HG+ +P+R
Sbjct: 171 HGMDDPER 178
>sp|NEF_HV1H3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HGLKEPKR 8
HG+ +P+R
Sbjct: 171 HGMDDPER 178
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 GLKEPK 7
G KEPK
Sbjct: 640 GFKEPK 645
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 1 HGLKEPK 7
HG ++PK
Sbjct: 385 HGYRQPK 391
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 1 HGLKEPKRV 9
H K PKR+
Sbjct: 367 HTQKAPKRI 375
105|Sequence|521|530|PKRVEELQNK
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 KRVEELQNK 10
KR+ EL+NK
Sbjct: 1199 KRIRELKNK 1207
>sp|LMP1_EBVR|LATENT membrane protein 1|Epstein-Barr virus (strain Raji) (HHV-4)
Query: 1 PKRVEELQNK 10
P+ EE++NK
Sbjct: 321 PQLTEEVENK 330
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEELQNK 10
++EE+QNK
Sbjct: 103 KIEEMQNK 110
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEELQNK 10
++EE+QNK
Sbjct: 103 KIEEMQNK 110
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 KRVEELQNK 10
KR+ +L+NK
Sbjct: 1198 KRIRDLKNK 1206
>sp|LMP1_EBVB9|LATENT membrane protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PKRVEELQNK 10
P+ EE++NK
Sbjct: 321 PQLTEEVENK 330
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEELQNK 10
++EE+QNK
Sbjct: 103 KIEEIQNK 110
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEELQNK 10
++EE+QNK
Sbjct: 103 KIEEIQNK 110
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEELQNK 10
++EE+QNK
Sbjct: 103 KIEEIQNK 110
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEELQNK 10
++EE+QNK
Sbjct: 103 KIEEIQNK 110
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEELQNK 10
++EE+QNK
Sbjct: 103 KIEEIQNK 110
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEELQNK 10
++EE+QNK
Sbjct: 103 KIEEIQNK 110
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEELQNK 10
++EE+QNK
Sbjct: 103 KIEEIQNK 110
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEELQNK 10
++EE+QNK
Sbjct: 103 KIEEIQNK 110
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEELQNK 10
++EE+QNK
Sbjct: 103 KIEEIQNK 110
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEELQNK 10
++EE+QNK
Sbjct: 103 KIEEIQNK 110
>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PKRVEELQNK 10
P EE++NK
Sbjct: 311 PNLTEEVENK 320
>sp|LMP1_EBVA8|LATENT membrane protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PKRVEELQNK 10
P EE++NK
Sbjct: 316 PNLTEEVENK 325
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 KRVEELQNK 10
KR+EEL K
Sbjct: 189 KRIEELLYK 197
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 2 KRVEELQN 9
KR+EE++N
Sbjct: 397 KRLEEVEN 404
106|Sequence|526|535|ELQNKIVNCL
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 1 ELQNKIVNCL 10
EL+NK+ +C+
Sbjct: 650 ELENKLTDCI 659
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 ELQNKIVNCL 10
EL+NK+ +C+
Sbjct: 651 ELENKLADCM 660
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 ELQNKIVN 8
EL+NK+VN
Sbjct: 1203 ELKNKMVN 1210
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 ELQNKIVNCL 10
ELQ ++NCL
Sbjct: 702 ELQVYLLNCL 711
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 ELQNKIVNCL 10
ELQ ++NCL
Sbjct: 702 ELQVYLLNCL 711
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 3 QNKIVNC 9
QNKI++C
Sbjct: 12 QNKILDC 18
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 QNKIVNCL 10
QN+I+N L
Sbjct: 1000 QNRIINSL 1007
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 QNKIVNCL 10
QN+I+N L
Sbjct: 1000 QNRIINSL 1007
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LQNKIVNCL 10
L+ KIV CL
Sbjct: 137 LRPKIVGCL 145
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 QNKIVNCL 10
QN+I+N L
Sbjct: 1000 QNRIINSL 1007
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 QNKIVNCL 10
QN+I+N L
Sbjct: 1000 QNRIINSL 1007
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 QNKIVNCL 10
QN+I+N L
Sbjct: 1000 QNRIINSL 1007
>sp|A49_VARV|PROTEIN A49|Variola virus
Query: 3 QNKIVNCL 10
NKI++C+
Sbjct: 87 DNKIIDCI 94
>sp|A49_VAR67|PROTEIN A49|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 QNKIVNCL 10
NKI++C+
Sbjct: 87 DNKIIDCI 94
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 ELQNKIVNCL 10
++ N+I CL
Sbjct: 1870 KMSNEIAQCL 1879
107|Sequence|531|540|IVNCLKDHVT
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 NCLKDHV 9
NC+ DHV
Sbjct: 623 NCIWDHV 629
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 IVNCLKDHVT 10
++ C+ DHVT
Sbjct: 220 LLGCICDHVT 229
Query: 3 NCLKDH 8
NC+KD+
Sbjct: 108 NCIKDY 113
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 184 MLNCVGDH 191
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 189 MLNCVGDH 196
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 189 MLNCVGDH 196
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 189 MLNCVGDH 196
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 187 MLNCVGDH 194
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 189 MLNCVGDH 196
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 190 MLNCVGDH 197
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 189 MLNCVGDH 196
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 189 MLNCVGDH 196
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 189 MLNCVGDH 196
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 184 MLNCVGDH 191
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 189 MLNCVGDH 196
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 189 MLNCVGDH 196
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 189 MLNCVGDH 196
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 187 MLNCVGDH 194
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 189 MLNCVGDH 196
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 190 MLNCVGDH 197
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 189 MLNCVGDH 196
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 189 MLNCVGDH 196
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 IVNCLKDH 8
++NC+ DH
Sbjct: 189 MLNCVGDH 196
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 1 IVNCLKDHV 9
+ NC DHV
Sbjct: 62 LANCSYDHV 70
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 3 NCLKDHVT 10
NC HVT
Sbjct: 736 NCFGQHVT 743
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 3 NCLKDHVT 10
NC HVT
Sbjct: 736 NCFGQHVT 743
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 3 NCLKDHVT 10
NC HVT
Sbjct: 736 NCFGQHVT 743
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 3 NCLKDHVT 10
NC HVT
Sbjct: 736 NCFGQHVT 743
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 3 NCLKDHVT 10
NC HVT
Sbjct: 736 NCFGQHVT 743
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 NCLKDHVT 10
NC HVT
Sbjct: 736 NCFGQHVT 743
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 NCLKDHVT 10
NC HVT
Sbjct: 736 NCFGQHVT 743
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 NCLKDHVT 10
NC HVT
Sbjct: 728 NCFGQHVT 735
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 3 NCLKDHVT 10
NC HVT
Sbjct: 736 NCFGQHVT 743
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 IVNCLKD 7
IV CL+D
Sbjct: 1665 IVRCLRD 1671
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 IVNCLKD 7
IV CL+D
Sbjct: 1662 IVRCLRD 1668
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 1 IVNCLK 6
I+NCLK
Sbjct: 208 ILNCLK 213
>sp|PG036_VARV|PROTEIN OPG036|Variola virus
Query: 1 IVNCLKDHV 9
I+NC+ H+
Sbjct: 33 IINCINRHI 41
>sp|PG036_VAR67|PROTEIN OPG036|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 IVNCLKDHV 9
I+NC+ H+
Sbjct: 33 IINCINRHI 41
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IVNCLK 6
I+NCLK
Sbjct: 208 ILNCLK 213
Query: 1 IVNCLKDHV 9
++NC K V
Sbjct: 39 VINCTKSEV 47
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 IVNCLKDHVT 10
+ NC K H++
Sbjct: 119 VKNCHKHHIS 128
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 IVNCLKDHVT 10
+ NC K H++
Sbjct: 119 VKNCHKHHIS 128
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 IVNCLKDHVT 10
+ NC K H++
Sbjct: 119 VKNCHKHHIS 128
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 1 IVNCLKDHVT 10
+V +KDH T
Sbjct: 255 VVAMIKDHFT 264
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 1 IVNCLKDHVT 10
I+N +DHV+
Sbjct: 181 ILNGCQDHVS 190
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 1 IVNCLKDHVT 10
I+N +DHV+
Sbjct: 181 ILNGCQDHVS 190
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 1 IVNCLKDHVT 10
I+N +DHV+
Sbjct: 181 ILNGCQDHVS 190
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 1 IVNCLKDHVT 10
I+N +DHV+
Sbjct: 181 ILNGCQDHVS 190
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 NCLKDH 8
+CL DH
Sbjct: 925 DCLADH 930
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 NCLKDH 8
+CL DH
Sbjct: 926 DCLADH 931
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 NCLKDH 8
+CL DH
Sbjct: 925 DCLADH 930
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 NCLKDH 8
+CL DH
Sbjct: 925 DCLADH 930
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 NCLKDH 8
+CL DH
Sbjct: 926 DCLADH 931
>sp|UL06_HCMVA|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 NCLKDHVT 10
NC H+T
Sbjct: 162 NCTDKHIT 169
>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NCLKDHVT 10
NC H+T
Sbjct: 158 NCTDKHIT 165
>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P
Query: 2 VNCLKDHV 9
+ CL++HV
Sbjct: 67 IACLREHV 74
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 VNCLKDHV 9
V+ L+DHV
Sbjct: 603 VSLLRDHV 610
>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35
Query: 4 CLKDHV 9
CL DH+
Sbjct: 26 CLSDHI 31
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 NCLKDHV 9
+C+++HV
Sbjct: 2111 SCMQEHV 2117
>sp|CEP1_HHV2H|CYTOPLASMIC envelopment protein 1|Human herpesvirus 2 (strain HG52)
Query: 3 NCLKDHVT 10
NC + H T
Sbjct: 150 NCPRSHAT 157
>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)
Query: 3 NCLKDHVT 10
NC + H T
Sbjct: 150 NCPRSHAT 157
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 4 CLKDHV 9
C K+H+
Sbjct: 228 CFKEHI 233
108|Sequence|536|545|KDHVTFNNGG
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 KDHVTFNNG 9
KD+ T+NNG
Sbjct: 882 KDYETYNNG 890
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 KDHVTFNNG 9
KD+ T+NNG
Sbjct: 882 KDYETYNNG 890
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 DHVTFNNGG 10
D + FNN G
Sbjct: 2284 DFIVFNNNG 2292
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 DHVTFNNGG 10
D + FNN G
Sbjct: 2284 DFIVFNNNG 2292
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 DHVTFN 7
DHV FN
Sbjct: 2000 DHVVFN 2005
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 DHVTFN 7
DHV FN
Sbjct: 1991 DHVVFN 1996
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 DHVTFN 7
DHV FN
Sbjct: 1992 DHVVFN 1997
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 2 DHVTFNNG 9
DH FN G
Sbjct: 305 DHQVFNPG 312
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DHVTFNNGG 10
D VT+ GG
Sbjct: 382 DGVTYTTGG 390
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 2 DHVTFN 7
+HVT+N
Sbjct: 626 EHVTYN 631
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 VTFNNGG 10
VTF +GG
Sbjct: 1061 VTFTSGG 1067
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 4 VTFNNG 9
+TFNNG
Sbjct: 372 LTFNNG 377
Query: 2 DHVTFNNG 9
D +TF+NG
Sbjct: 291 DGLTFDNG 298
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 DHVTFNN 8
DH+ NN
Sbjct: 439 DHIIVNN 445
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 4 VTFNNGG 10
+ FN+GG
Sbjct: 919 IQFNHGG 925
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 4 VTFNNGG 10
+ FN+GG
Sbjct: 919 IQFNHGG 925
>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)
Query: 3 HVTFNNGG 10
H T+ +GG
Sbjct: 66 HTTYYDGG 73
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 HVTFNNG 9
HV NNG
Sbjct: 319 HVNNNNG 325
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 3 HVTFNNG 9
HV NNG
Sbjct: 319 HVNNNNG 325
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 HVTFNNG 9
HV NNG
Sbjct: 319 HVNNNNG 325
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 HVTFNNG 9
HV NNG
Sbjct: 319 HVNNNNG 325
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 3 HVTFNNG 9
HV NNG
Sbjct: 319 HVNNNNG 325
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KDHVTFNNGG 10
K H + NGG
Sbjct: 1002 KSHTLWINGG 1011
109|Sequence|541|550|FNNGGLNRPN
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 FNNGGLNRP 9
+NN G NRP
Sbjct: 943 YNNKGENRP 951
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 FNNGGLNRP 9
+NN G NRP
Sbjct: 935 YNNKGENRP 943
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 FNNGGLNRP 9
+NN G NRP
Sbjct: 943 YNNKGENRP 951
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 FNNGGLNRP 9
+NN G NRP
Sbjct: 943 YNNKGENRP 951
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FNNGGLNRP 9
+NN G NRP
Sbjct: 943 YNNKGENRP 951
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 FNNGGLNRP 9
+NN G NRP
Sbjct: 943 YNNKGENRP 951
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 1 FNNGGLNRP 9
+NN G NRP
Sbjct: 943 YNNKGENRP 951
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 FNNGGLNRP 9
+NN G NRP
Sbjct: 943 YNNKGENRP 951
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 FNNGGLNRP 9
+NN G NRP
Sbjct: 943 YNNKGENRP 951
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 1 FNNGGLNRP 9
FNN G NRP
Sbjct: 37 FNNDGNNRP 45
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 FNNGGLNRP 9
FNN G NRP
Sbjct: 37 FNNDGNNRP 45
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 FNNGGLNRP 9
FN+ LNRP
Sbjct: 2991 FNDHHLNRP 2999
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 FNNGGLNRP 9
FN+ LNRP
Sbjct: 2991 FNDHHLNRP 2999
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 1 FNNGGLNR 8
F N GLNR
Sbjct: 515 FVNAGLNR 522
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 FNNGGLNR 8
F N GLNR
Sbjct: 515 FVNAGLNR 522
>sp|C_MEASE|PROTEIN C|Measles virus (strain Edmonston) (MeV)
Query: 1 FNNGGLNRPN 10
+N GL+RP+
Sbjct: 6 WNASGLSRPS 15
>sp|C_MEASC|PROTEIN C|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 FNNGGLNRPN 10
+N GL+RP+
Sbjct: 6 WNASGLSRPS 15
>sp|C_MEASA|PROTEIN C|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 FNNGGLNRPN 10
+N GL+RP+
Sbjct: 6 WNASGLSRPS 15
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 FNNGGLN 7
N+GGLN
Sbjct: 2251 LNDGGLN 2257
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 FNNGGLNRP 9
+ +GGLN P
Sbjct: 369 WGDGGLNDP 377
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FNNGGLNRP 9
+ +GGLN P
Sbjct: 369 WGDGGLNDP 377
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 FNNGGLN 7
FNN G N
Sbjct: 2288 FNNNGTN 2294
Query: 5 GLNRPN 10
GLN PN
Sbjct: 3514 GLNAPN 3519
>sp|PG170_VACCC|PROTEIN OPG170|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NNGGLN 7
+NGGLN
Sbjct: 65 SNGGLN 70
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 FNNGGL 6
FN+GGL
Sbjct: 921 FNHGGL 926
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 FNNGGL 6
FN+GGL
Sbjct: 921 FNHGGL 926
>sp|PG170_VAR67|PROTEIN OPG170|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 NNGGLN 7
+NGGLN
Sbjct: 65 SNGGLN 70
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 FNNGGLN 7
FNN G N
Sbjct: 2288 FNNNGTN 2294
Query: 5 GLNRPN 10
GLN PN
Sbjct: 3514 GLNAPN 3519
>sp|PG170_MONPV|PROTEIN OPG170|Monkeypox virus (MPXV)
Query: 2 NNGGLN 7
+NGGLN
Sbjct: 67 SNGGLN 72
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 FNNGGLNR 8
FNN LN+
Sbjct: 314 FNNPSLNK 321
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 FNNGGLN 7
+N GGLN
Sbjct: 531 WNEGGLN 537
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 FNNGGLNR 8
FNN LN+
Sbjct: 314 FNNPSLNK 321
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NNGGLNRP 9
N GG +RP
Sbjct: 721 NRGGPDRP 728
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 FNNGGLN 7
+N GGLN
Sbjct: 531 WNEGGLN 537
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 FNNGGLNR 8
FNN LN+
Sbjct: 304 FNNPSLNK 311
110|Sequence|546|555|LNRPNYLSKL
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 2 NRPNYLS 8
NRPNY++
Sbjct: 211 NRPNYIA 217
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 2 NRPNYLS 8
NRPNY++
Sbjct: 334 NRPNYIA 340
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 2 NRPNYLS 8
NRPNY++
Sbjct: 215 NRPNYIA 221
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 2 NRPNYLS 8
NRPNY++
Sbjct: 194 NRPNYIA 200
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 2 NRPNYLS 8
NRPNY++
Sbjct: 322 NRPNYIA 328
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 2 NRPNYL 7
NRPNY+
Sbjct: 204 NRPNYI 209
>sp|PG122_VACCC|MRNA-DECAPPING protein OPG122|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LNRPNYLSK 9
LN NYLSK
Sbjct: 89 LNYSNYLSK 97
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 2 NRPNYL 7
NRPNY+
Sbjct: 305 NRPNYI 310
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 2 NRPNYL 7
NRPNY+
Sbjct: 310 NRPNYI 315
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 2 NRPNYL 7
NRPNY+
Sbjct: 311 NRPNYI 316
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 2 NRPNYL 7
NRPNY+
Sbjct: 239 NRPNYI 244
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 2 NRPNYL 7
NRPNY+
Sbjct: 315 NRPNYI 320
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 2 NRPNYL 7
NRPNY+
Sbjct: 298 NRPNYI 303
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 2 NRPNYL 7
NRPNY+
Sbjct: 295 NRPNYI 300
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 LNRPNYL 7
L+ PNYL
Sbjct: 56 LSEPNYL 62
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 LNRPNYLSKL 10
+NRP Y L
Sbjct: 311 VNRPGYYELL 320
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 LNRPNYLSKL 10
+NRP Y L
Sbjct: 311 VNRPGYYELL 320
>sp|ARBH_HHV8P|APOPTOSIS regulator Bcl-2 homolog|Human herpesvirus 8 type P
Query: 1 LNRPNYL 7
LN P YL
Sbjct: 22 LNEPEYL 28
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 1 LNRPNYLSKL 10
LN P LSKL
Sbjct: 361 LNNPVILSKL 370
>sp|PHOSP_HRSVA|PHOSPHOPROTEIN respiratory syncytial virus A
Query: 2 NRPNYLSK 9
N+PNY K
Sbjct: 75 NKPNYQRK 82
>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 3 RPNYLS 8
+PNY+S
Sbjct: 304 KPNYIS 309
>sp|PHOSP_HRSV|PHOSPHOPROTEIN respiratory syncytial virus
Query: 2 NRPNYLSK 9
N+PNY K
Sbjct: 75 NKPNYQRK 82
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LNRPNYLSKL 10
LN P LSKL
Sbjct: 365 LNNPVILSKL 374
111|Sequence|551|560|YLSKLLGKLP
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 YLSKLLGKLP 10
YLS +LG +P
Sbjct: 2012 YLSTILGDVP 2021
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 YLSKLLGKLP 10
YLS +LG +P
Sbjct: 2013 YLSTVLGDVP 2022
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SKLLGKLP 10
SKLL KLP
Sbjct: 1997 SKLLPKLP 2004
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 LSKLLGK 8
LSKL+GK
Sbjct: 1159 LSKLIGK 1165
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 SKLLGKLP 10
SKLL K+P
Sbjct: 2001 SKLLPKMP 2008
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SKLLGKLP 10
SKLL +LP
Sbjct: 1997 SKLLPRLP 2004
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 1 YLSKLLGK 8
+LS++LGK
Sbjct: 6 FLSEILGK 13
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SKLLGKLP 10
SKLL +LP
Sbjct: 1997 SKLLPRLP 2004
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SKLLGKLP 10
SKLL +LP
Sbjct: 1997 SKLLPRLP 2004
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SKLLGKLP 10
SKLL +LP
Sbjct: 1997 SKLLPRLP 2004
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SKLLGKLP 10
SKLL +LP
Sbjct: 1997 SKLLPRLP 2004
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 5 LLGKLP 10
LLG+LP
Sbjct: 263 LLGRLP 268
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 LSKLLGKLP 10
L ++LGK+P
Sbjct: 2129 LIEVLGKMP 2137
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SKLLGKLP 10
SKLL +LP
Sbjct: 1997 SKLLPQLP 2004
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LSKLLGKLP 10
SK+ GK P
Sbjct: 2061 FSKIFGKSP 2069
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LSKLLGKLP 10
SK+ GK P
Sbjct: 2061 FSKIFGKSP 2069
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LSKLLGKLP 10
SK+ GK P
Sbjct: 2061 FSKIFGKSP 2069
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LSKLLGKLP 10
SK+ GK P
Sbjct: 1895 FSKIFGKSP 1903
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LSKLLGKLP 10
SK+ GK P
Sbjct: 2061 FSKIFGKSP 2069
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LSKLLGKLP 10
SK+ GK P
Sbjct: 2061 FSKIFGKSP 2069
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 SKLLGKLP 10
SKL KLP
Sbjct: 2001 SKLFPKLP 2008
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 LLGKLP 10
LLG+LP
Sbjct: 375 LLGRLP 380
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 LLGKLP 10
LLG+LP
Sbjct: 375 LLGRLP 380
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LSKLLGKL 9
+ KL+GKL
Sbjct: 843 IQKLIGKL 850
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 YLSKLLG 7
YL+K+LG
Sbjct: 116 YLNKILG 122
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 YLSKLLG 7
YL+K+LG
Sbjct: 116 YLNKILG 122
112|Sequence|556|565|LGKLPELRTL
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 4 LPELRTL 10
LPELRTL
Sbjct: 233 LPELRTL 239
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 1 LGKLPELRT 9
LG+ P+L+T
Sbjct: 43 LGRAPDLKT 51
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 1 LGKLPELRTL 10
+GK+P++ TL
Sbjct: 424 IGKVPQILTL 433
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 LGKLPELRTL 10
+GK+P++ TL
Sbjct: 424 IGKVPQILTL 433
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11])
Query: 1 LGKLPELRTL 10
+GK+P++ TL
Sbjct: 424 IGKVPQILTL 433
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 LGKLPELRTL 10
+GK+P++ TL
Sbjct: 424 IGKVPQILTL 433
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 LGKLPELRTL 10
+GK+P++ TL
Sbjct: 424 IGKVPQILTL 433
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 1 LGKLPELRTL 10
+GK+P++ TL
Sbjct: 424 IGKVPQILTL 433
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 1 LGKLPELRTL 10
+GK+P++ TL
Sbjct: 424 IGKVPQILTL 433
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 LGKLPELRTL 10
+GK+P++ TL
Sbjct: 424 VGKVPQILTL 433
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 5 PELRTL 10
PELRTL
Sbjct: 404 PELRTL 409
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 5 PELRTL 10
PELRTL
Sbjct: 404 PELRTL 409
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 LGKLPE 6
LGK+PE
Sbjct: 2133 LGKMPE 2138
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 LGKLPE 6
LGK+PE
Sbjct: 2133 LGKMPE 2138
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 2 GKLPELR 8
GK PEL+
Sbjct: 473 GKYPELK 479
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 2 GKLPELR 8
GKLP+L+
Sbjct: 42 GKLPQLK 48
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 2 GKLPELR 8
GKLP+L+
Sbjct: 42 GKLPQLK 48
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 1 LGKLPELRT 9
LG+ P+L T
Sbjct: 43 LGRAPDLST 51
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 LPELRTL 10
LPEL++L
Sbjct: 3825 LPELKSL 3831
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 LGKLPE 6
LGK PE
Sbjct: 293 LGKFPE 298
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 LGKLPE 6
LGK PE
Sbjct: 293 LGKFPE 298
>sp|PHOSP_RABVN|PHOSPHOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 GKLPEL 7
GKLP+L
Sbjct: 61 GKLPDL 66
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LGKLPELRTL 10
+GKLP+ TL
Sbjct: 2104 IGKLPQHLTL 2113
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 LGKLPEL 7
LGK P+L
Sbjct: 43 LGKAPDL 49
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LGKLPEL 7
LG+LP+L
Sbjct: 305 LGELPQL 311
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 LGKLPE 6
LGK PE
Sbjct: 293 LGKFPE 298
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 2 GKLPELRTL 10
+LP+L+T+
Sbjct: 532 ARLPDLKTV 540
113|Sequence|561|570|ELRTLCTQGL
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LRTLCTQGL 10
L+TL T GL
Sbjct: 2119 LKTLATHGL 2127
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 LRTLCTQGL 10
L+TL T GL
Sbjct: 2119 LKTLATHGL 2127
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 1 ELRTLCTQ 8
E+R +CT+
Sbjct: 313 EIRLMCTE 320
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 1 ELRTLCTQ 8
E+R +CT+
Sbjct: 312 EIRLMCTE 319
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 1 ELRTLCTQ 8
E+R +CT+
Sbjct: 312 EIRLMCTE 319
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 1 ELRTLCTQ 8
E+R +CT+
Sbjct: 312 EIRLMCTE 319
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 1 ELRTLCTQ 8
E+R +CT+
Sbjct: 313 EIRLMCTE 320
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 1 ELRTLCTQ 8
E+R +CT+
Sbjct: 313 EIRLMCTE 320
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 1 ELRTLCTQ 8
E+R +CT+
Sbjct: 312 EIRLMCTE 319
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 1 ELRTLCTQ 8
E+R +CT+
Sbjct: 312 EIRLMCTE 319
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 1 ELRTLCTQ 8
E+R +CT+
Sbjct: 313 EIRLMCTE 320
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 1 ELRTLCTQ 8
E+R +CT+
Sbjct: 313 EIRLMCTE 320
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 1 ELRTLCTQ 8
E+R +CT+
Sbjct: 313 EIRLMCTE 320
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 1 ELRTLCTQ 8
E+R +CT+
Sbjct: 313 EIRLMCTK 320
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ELRTLCTQG 9
++ T+C+QG
Sbjct: 60 KMGTVCSQG 68
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 1 ELRTLCTQG 9
++ T+C+QG
Sbjct: 60 KMGTVCSQG 68
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 4 TLCTQGL 10
T+C +GL
Sbjct: 97 TVCVEGL 103
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 4 TLCTQGL 10
T+C +GL
Sbjct: 97 TVCVEGL 103
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 4 TLCTQG 9
T+C QG
Sbjct: 189 TICVQG 194
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 4 TLCTQG 9
T+C QG
Sbjct: 189 TICVQG 194
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 RTLCTQG 9
+T CT+G
Sbjct: 149 KTSCTEG 155
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RTLCTQG 9
+T CT+G
Sbjct: 149 KTSCTEG 155
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 RTLCTQG 9
+T CT+G
Sbjct: 149 KTSCTEG 155
114|Sequence|566|575|CTQGLQRIFY
>sp|REX_HTL1F|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 2 TQGLQRIFY 10
+QGL R+F+
Sbjct: 23 SQGLDRVFF 31
>sp|REX_HTL1C|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 2 TQGLQRIFY 10
+QGL R+F+
Sbjct: 23 SQGLDRVFF 31
>sp|REX_HTL1A|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 2 TQGLQRIFY 10
+QGL R+F+
Sbjct: 23 SQGLDRVFF 31
>sp|REX_HTL1L|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 2 TQGLQRIFY 10
+QGL ++F+
Sbjct: 23 SQGLDKVFF 31
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 GLQRIFY 10
G+QR FY
Sbjct: 2178 GVQRSFY 2184
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 GLQRIFY 10
G+QR FY
Sbjct: 2178 GVQRSFY 2184
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 LQRIFY 10
LQ++FY
Sbjct: 780 LQKVFY 785
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 LQRIFY 10
LQ++FY
Sbjct: 780 LQKVFY 785
>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 4 GLQRIFY 10
GL+ IFY
Sbjct: 128 GLEGIFY 134
>sp|NEF_HV2BE|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 4 GLQRIFY 10
GLQ +FY
Sbjct: 128 GLQGMFY 134
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CTQGLQRIFY 10
CT L+R Y
Sbjct: 328 CTPSLERTGY 337
>sp|NSP6_ROT41|NON-STRUCTURAL protein 6|Rotavirus A (isolate
Query: 1 CTQGLQRIF 9
C Q LQ+I
Sbjct: 33 CCQNLQKIL 41
115|Sequence|571|580|QRIFYLKLED
>sp|DUT_VACCP|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain L-IVP)
Query: 1 QRIFYLKLED 10
QRI+Y +LE+
Sbjct: 118 QRIYYPELEE 127
>sp|DUT_VACCC|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 1 QRIFYLKLED 10
QRI+Y +LE+
Sbjct: 118 QRIYYPELEE 127
>sp|DUT_VACCA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain Ankara)
Query: 1 QRIFYLKLED 10
QRI+Y +LE+
Sbjct: 118 QRIYYPELEE 127
>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /
Query: 1 QRIFYLKLED 10
QRI+Y +LE+
Sbjct: 118 QRIYYPELEE 127
>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)
Query: 1 QRIFYLKLED 10
QRI+Y +LE+
Sbjct: 122 QRIYYPELEE 131
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 QRIFYLKLED 10
R+F LKL D
Sbjct: 71 HRVFRLKLPD 80
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 1 QRIFYLKLED 10
R+F LKL D
Sbjct: 71 HRVFRLKLPD 80
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 QRIFYLKLED 10
R+F LKL D
Sbjct: 100 HRVFRLKLPD 109
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 1 QRIFYLKLED 10
R+F LKL D
Sbjct: 71 HRVFRLKLPD 80
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 QRIFYLKLED 10
R+F LKL D
Sbjct: 71 HRVFRLKLPD 80
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 QRIFYLKLED 10
R+F LKL D
Sbjct: 71 HRVFRLKLPD 80
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 QRIFYLKLED 10
R+F LKL D
Sbjct: 71 HRVFRLKLPD 80
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 1 QRIFYLKLED 10
R+F LKL D
Sbjct: 71 HRVFRLKLPD 80
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 QRIFYLKLED 10
R+F LKL D
Sbjct: 71 HRVFRLKLPD 80
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 1 QRIFYLKLED 10
R+F LKL D
Sbjct: 71 HRVFRLKLPD 80
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 QRIFYLKLED 10
R+F LKL D
Sbjct: 71 HRVFRLKLPD 80
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 QRIFYLKLED 10
Q+IFY +ED
Sbjct: 2726 QQIFYNHVED 2735
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 1 QRIFYLKLED 10
R+F LKL D
Sbjct: 71 HRVFRLKLPD 80
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 2 RIFYLKLED 10
R+F +KL D
Sbjct: 100 RVFRIKLPD 108
>sp|NCAP_BUNYW|NUCLEOPROTEIN virus (BUNV)
Query: 2 RIFYLK 7
RIFY+K
Sbjct: 40 RIFYIK 45
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 4 FYLKLED 10
YLKL+D
Sbjct: 58 LYLKLQD 64
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 QRIFYLKLED 10
Q+IF+ +ED
Sbjct: 2638 QQIFFNHVED 2647
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 4 FYLKLED 10
YLKL+D
Sbjct: 58 LYLKLQD 64
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 4 FYLKLED 10
YLKL+D
Sbjct: 58 LYLKLQD 64
116|Sequence|576|585|LKLEDLVPPP
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LKLEDLVP 8
LKLED +P
Sbjct: 6692 LKLEDFIP 6699
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 KLEDLVPP 9
KL DL+PP
Sbjct: 1932 KLYDLLPP 1939
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 KLEDLVPP 9
KL DL+PP
Sbjct: 1932 KLYDLLPP 1939
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 KLEDLVPP 9
KL DL+PP
Sbjct: 1932 KLYDLLPP 1939
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 KLEDLVPP 9
KL DL+PP
Sbjct: 1932 KLYDLLPP 1939
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KLEDLVP 8
+LEDLVP
Sbjct: 226 RLEDLVP 232
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 2 KLEDLVP 8
+LEDLVP
Sbjct: 226 RLEDLVP 232
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 2 KLEDLVP 8
+LEDLVP
Sbjct: 226 RLEDLVP 232
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 KLEDLVP 8
+LEDLVP
Sbjct: 226 RLEDLVP 232
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain
Query: 2 KLEDLVPP 9
+LED +PP
Sbjct: 29 RLEDPLPP 36
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 KLEDLVPP 9
+LED +PP
Sbjct: 29 RLEDPLPP 36
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 LKLEDLVPPP 10
+KL+D +P P
Sbjct: 76 IKLQDWIPTP 85
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 4 EDLVPPP 10
ED+ PPP
Sbjct: 360 EDMTPPP 366
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 4 EDLVPPP 10
ED+ PPP
Sbjct: 360 EDMTPPP 366
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 LKLEDLVPPP 10
+KL+D +P P
Sbjct: 76 IKLQDWIPTP 85
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 1 LKLEDLVP 8
L LEDL P
Sbjct: 23 LMLEDLAP 30
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 2 KLEDLVP 8
KLE+L+P
Sbjct: 305 KLEELIP 311
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 LKLEDLVP 8
L LEDL P
Sbjct: 40 LMLEDLAP 47
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 LKLEDLVP 8
L LEDL P
Sbjct: 58 LMLEDLAP 65
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 LKLEDLVP 8
L LEDL P
Sbjct: 58 LMLEDLAP 65
>sp|VE7_HPV69|PROTEIN E7|Human papillomavirus 69
Query: 5 DLVPPP 10
DLVP P
Sbjct: 14 DLVPQP 19
>sp|VE7_HPV26|PROTEIN E7|Human papillomavirus type 26
Query: 5 DLVPPP 10
DLVP P
Sbjct: 14 DLVPQP 19
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LEDLVP 8
L+DLVP
Sbjct: 584 LDDLVP 589
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LEDLVP 8
L+DLVP
Sbjct: 584 LDDLVP 589
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 LKLEDLV 7
LKL+DLV
Sbjct: 1344 LKLKDLV 1350
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 LKLEDLV 7
LKL+DLV
Sbjct: 1352 LKLKDLV 1358
117|Sequence|581|590|LVPPPAIIDK
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1445 PPPAIAD 1451
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1465 PPPAIAD 1471
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1456 PPPAIAD 1462
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1446 PPPAIAD 1452
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1457 PPPAIAD 1463
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1455 PPPAIAD 1461
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1446 PPPAIAD 1452
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1449 PPPAIAD 1455
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1444 PPPAIAD 1450
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1455 PPPAIAD 1461
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1447 PPPAIAD 1453
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1447 PPPAIAD 1453
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1458 PPPAIAD 1464
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1421 PPPAITD 1427
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1418 PPPAITD 1424
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1425 PPPAIAD 1431
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 PPPAIID 9
PPPAI D
Sbjct: 1432 PPPAIAD 1438
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 PPPAIID 9
PPP I D
Sbjct: 1463 PPPVIAD 1469
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LVPPPAIID 9
L+PPP + D
Sbjct: 113 LLPPPNLED 121
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LVPPPAIID 9
L+PPP + D
Sbjct: 113 LLPPPNLED 121
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LVPPPAIID 9
L+PPP + D
Sbjct: 113 LLPPPNLED 121
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 VPPPAIID 9
+ PP +ID
Sbjct: 1687 ISPPEVID 1694
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 LVPPPAI 7
L+PPP +
Sbjct: 1841 LIPPPTL 1847
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 2 VPPPAI 7
VPPP+I
Sbjct: 156 VPPPSI 161
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 2 VPPPAI 7
VPPP+I
Sbjct: 156 VPPPSI 161
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain GD1)
Query: 2 VPPPAI 7
VPPP+I
Sbjct: 156 VPPPSI 161
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 1 LVPPPAIID 9
++ PP ++D
Sbjct: 274 IINPPGVLD 282
>sp|TRX1_EBVB9|TRIPLEX capsid protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LVPPPA 6
L+PPPA
Sbjct: 19 LLPPPA 24
>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1
Query: 1 LVPPPA 6
L+PPPA
Sbjct: 210 LLPPPA 215
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 1 LVPPPAIID 9
++ PP ++D
Sbjct: 274 IINPPGVLD 282
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 LVPPPA 6
L PPPA
Sbjct: 1825 LAPPPA 1830
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 1 LVPPPAIID 9
++ PP ++D
Sbjct: 274 IINPPGVLD 282
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 1 LVPPPAIID 9
++ PP ++D
Sbjct: 274 IINPPGVLD 282
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LVPPPA 6
L+PPP+
Sbjct: 33 LLPPPS 38
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 LVPPPAIID 9
++PP ++D
Sbjct: 2026 IIPPQKVLD 2034
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LVPPPA 6
L+PPP+
Sbjct: 33 LLPPPS 38
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 PAIIDK 10
PA++DK
Sbjct: 4449 PALVDK 4454
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 2 VPPPAIID 9
V PP+++D
Sbjct: 496 VVPPSLVD 503
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 LVPPPAII 8
L PPP I
Sbjct: 1565 LTPPPKTI 1572
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 LVPPPAII 8
L PPP I
Sbjct: 1565 LTPPPKTI 1572
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 LVPPPAI 7
+VPPP I
Sbjct: 869 VVPPPYI 875
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 VPPPAIIDK 10
VPP IDK
Sbjct: 303 VPPNPTIDK 311
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 VPPPAIIDK 10
VPP IDK
Sbjct: 303 VPPNPTIDK 311
118|Sequence|586|598|AIIDKLFLDTLPF
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 IIDKLFLDTLPF 13
I+ K+F+D +PF
Sbjct: 4707 IVRKIFVDGVPF 4718
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 IIDKLFLDTLPF 13
++ K+F+D +PF
Sbjct: 4698 LVRKIFVDGVPF 4709
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 IIDKLFLDTLPF 13
++ K+F+D +PF
Sbjct: 4721 LVRKIFVDGVPF 4732
>sp|B1_HHV6Z|PROTEIN B1|Human herpesvirus 6B (strain Z29)
Query: 3 IDKLFLDTLP 12
ID+L L LP
Sbjct: 124 IDRLLLSVLP 133
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 IIDKLFLDTLPF 13
++ ++F+D +PF
Sbjct: 4694 LVRQIFVDGVPF 4705
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 7 FLDTLPF 13
FL+T PF
Sbjct: 574 FLNTFPF 580
>sp|VE7_HPV68|PROTEIN E7|Human papillomavirus 68
Query: 3 IDKLFLDTLPF 13
+ +LF+D+L F
Sbjct: 90 LQQLFMDSLNF 100
>sp|VE7_HPV39|PROTEIN E7|Human papillomavirus 39
Query: 3 IDKLFLDTLPF 13
+ +LF+D+L F
Sbjct: 89 LQQLFMDSLGF 99
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 IIDKLFLDTLPF 13
++ ++F+D +PF
Sbjct: 4732 LVRQIFVDGVPF 4743
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 IIDKLFLDTLPF 13
++ ++F+D +PF
Sbjct: 4752 LVRQIFVDGVPF 4763
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 IIDKLFLDTLPF 13
++ ++F+D +PF
Sbjct: 4782 LVRQIFVDGVPF 4793
>sp|VE7_HPVME|PROTEIN E7|Human papillomavirus type ME180
Query: 3 IDKLFLDTLPF 13
++ LF+D+L F
Sbjct: 90 VELLFMDSLNF 100
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 6 LFLDTLPF 13
LFLD PF
Sbjct: 665 LFLDKSPF 672
>sp|VE7_HPV70|PROTEIN E7|Human papillomavirus type 70
Query: 5 KLFLDTLPF 13
+LF++TL F
Sbjct: 91 QLFMETLSF 99
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 1 AIIDKLFLDTLPF 13
+ +DK LD+L F
Sbjct: 207 SFLDKPLLDSLYF 219
>sp|M2_I88A7|MATRIX protein 2|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 2 IIDKLFL 8
I+D+LFL
Sbjct: 42 ILDRLFL 48
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 2 IIDKLFLDTLPF 13
+ID + LDT+ F
Sbjct: 1151 MIDNIQLDTVMF 1162
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 2 IIDKLFLDTLPF 13
+ID + LDT+ F
Sbjct: 1151 MIDNIQLDTVMF 1162
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 1 AIIDKLFLD 9
AI++ LF+D
Sbjct: 193 AIVEALFID 201
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AIIDKLFLD 9
AI++ LF+D
Sbjct: 193 AIVEALFID 201
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 IIDKLFLDTLP 12
+I L DTLP
Sbjct: 787 VIHLLAFDTLP 797