NR4A2_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|SGYQAQVCPM

>sp|PIMT_PYRIL|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SGYQAQVC 8
SGYQA VC
Sbjct: 83 SGYQAAVC 90


>sp|PIMT_PYRNV|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 SGYQAQVC 8
SGYQA VC
Sbjct: 83 SGYQAAVC 90


>sp|PIMT_PYRAE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SGYQAQVC 8
SGY A VC
Sbjct: 83 SGYHAAVC 90


>sp|PIMT_PYRAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SGYQAQVC 8
SGY A VC
Sbjct: 83 SGYHAAVC 90


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 1 SGYQAQVCP 9
+ +AQVCP
Sbjct: 139 TAMKAQVCP 147


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 1 SGYQAQVCP 9
+ +AQVCP
Sbjct: 139 TAMKAQVCP 147


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GYQAQVC 8
GY+ QVC
Sbjct: 9 GYKKQVC 15


>sp|PIMT_PYRCJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SGYQAQVC 8
SGY A VC
Sbjct: 83 SGYHAAVC 90


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SGYQAQVCPM 10
SGY + CP+
Sbjct: 10 SGYLRKQCPL 19


>sp|FTR_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GYQAQVCPM 10
GY Q+C M
Sbjct: 71 GYYIQICHM 79


>sp|SYY_METMP|TYROSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GYQAQVC 8
GY+A VC
Sbjct: 196 GYKAPVC 202


>sp|TRKA_ARCFU|TRK system potassium uptake protein|Archaeoglobus fulgidus (strain ATCC

Query: 2 GYQAQVCP 9
GY +CP
Sbjct: 113 GYDVLICP 120




2|SequenceR|15|6|AGQPSSGYQA

>sp|RL10_METKA|LARGE ribosomal subunit protein uL10|Methanopyrus kandleri (strain AV19

Query: 2 GQPSSGYQ 9
GQP SGY+
Sbjct: 7 GQPPSGYE 14


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PSSGYQ 9
PSSGY+
Sbjct: 66 PSSGYE 71


>sp|AROB_AERPE|3-DEHYDROQUINATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AGQPSSGYQ 9
AGQP GY+
Sbjct: 171 AGQPDEGYR 179




3|SequenceR|20|11|QSAPSAGQPS

>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QSAPSAGQPS 10
+ PS GQP+
Sbjct: 106 RGGPSTGQPT 115


>sp|MCRC_METTM|METHYL-COENZYME M reductase I operon|Methanothermobacter marburgensis (strain

Query: 1 QSAPSAGQPS 10
Q APSAG S
Sbjct: 79 QDAPSAGAGS 88


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus (Sulfolobus

Query: 1 QSAPSAGQPS 10
+ PS GQP+
Sbjct: 345 RGGPSTGQPT 354


>sp|MCRC_METTH|METHYL-COENZYME M reductase I operon|Methanothermobacter thermautotrophicus

Query: 1 QSAPSAGQPS 10
Q APSAG S
Sbjct: 79 QDAPSAGAGS 88


>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain ATCC

Query: 1 QSAPSAGQPS 10
+ +PS GQP+
Sbjct: 107 RGSPSTGQPT 116




4|SequenceR|25|16|HYSYSQSAPS

>sp|CBIT_METAC|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 HYSYSQSAP 9
H S S+SAP
Sbjct: 154 HISVSRSAP 162


>sp|GLYA_METS3|SERINE hydroxymethyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 HYSYSQS 7
HYS+SQ+
Sbjct: 408 HYSFSQN 414


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain

Query: 1 HYSYS 5
HYSYS
Sbjct: 78 HYSYS 82




5|SequenceR|30|21|YEGSSHYSYS

>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain

Query: 2 EGSSHYSYS 10
+ +SHYSYS
Sbjct: 74 DSASHYSYS 82


>sp|AAT_METJA|PROBABLE aspartate aminotransferase|Methanocaldococcus jannaschii (strain

Query: 2 EGSSHYS 8
EG +HYS
Sbjct: 51 EGKTHYS 57


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 4 SSHYSY 9
SSHY Y
Sbjct: 312 SSHYDY 317


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 4 SSHYSY 9
SSHY Y
Sbjct: 312 SSHYDY 317


>sp|DCD_THEKO|DCTP deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YEGSSHYSYS 10
Y+GS H + S
Sbjct: 142 YQGSKHLALS 151


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 YEGSSHYSYS 10
Y G+ YSY+
Sbjct: 9 YTGTGGYSYA 18


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YEGSSHYSYS 10
Y G +H SY+
Sbjct: 424 YTGEAHPSYT 433


>sp|RS4_METTP|SMALL ribosomal subunit protein uS4|Methanothrix thermoacetophila

Query: 1 YEGSSHYSY 9
Y G SH +Y
Sbjct: 3 YPGKSHKTY 11




6|SequenceR|35|26|LFDSSYEGSS

>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 FDSSYE 7
FDSSYE
Sbjct: 175 FDSSYE 180


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 LFDSSYEG 8
+ D+SYEG
Sbjct: 760 ILDASYEG 767


>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 1 LFDSSYEGS 9
+FDS EGS
Sbjct: 187 VFDSEKEGS 195


>sp|GATB_METHJ|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 1 LFDSSYEGS 9
+FDS EGS
Sbjct: 186 VFDSEKEGS 194


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DSSYEGSS 10
DSSYEG +
Sbjct: 806 DSSYEGDA 813




7|SequenceR|40|31|VFEPTLFDSS

>sp|THIM_METB6|HYDROXYETHYLTHIAZOLE kinase|Methanoregula boonei (strain DSM 21154

Query: 2 FEPTLFDS 9
F+P LFD+
Sbjct: 241 FKPALFDA 248


>sp|ASPD_META3|L-ASPARTATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VFEPTLFDS 9
VFE T+FD+
Sbjct: 172 VFEGTVFDA 180


>sp|TRMI_METJA|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 3 EPTLFD 8
EPT+FD
Sbjct: 54 EPTMFD 59


>sp|ASPD_METMP|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VFEPTLFDS 9
VFE T+FD+
Sbjct: 173 VFEGTVFDA 181


>sp|AGL11_HALVD|LOW-SALT glycan biosynthesis nucleotidyltransferase Agl11|Haloferax volcanii

Query: 1 VFEPTLFDS 9
VF P +FD+
Sbjct: 174 VFSPAVFDA 182


>sp|UDGA_ARCFU|TYPE-4 uracil-DNA glycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EPTLFD 8
+PTLFD
Sbjct: 192 QPTLFD 197


>sp|DHYS2_ARCFU|PROBABLE deoxyhypusine synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VFEPTLFDSS 10
+F P + DSS
Sbjct: 157 IFSPAIADSS 166


>sp|DHYS2_METAC|PROBABLE deoxyhypusine synthase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 VFEPTLFDSS 10
+F P L DSS
Sbjct: 187 IFVPALSDSS 196


>sp|DHYS2_METMA|PROBABLE deoxyhypusine synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VFEPTLFDSS 10
+F P L DSS
Sbjct: 187 IFVPALSDSS 196


>sp|COBQ_METPE|PROBABLE cobyric acid synthase|Methanosphaerula palustris (strain ATCC

Query: 3 EPTLFDS 9
+PTLF+S
Sbjct: 199 DPTLFES 205




8|SequenceR|45|36|DMSFKVFEPT

>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 1 DMSFKVFEPT 10
DM F+V +P+
Sbjct: 27 DMGFQVVQPS 36


>sp|FAU1_PYRNV|PROBABLE ribonuclease FAU-1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DMSFKVFEPT 10
D FKV +PT
Sbjct: 20 DWGFKVVQPT 29


>sp|FAU1_PYRAR|PROBABLE ribonuclease FAU-1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DMSFKVFEPT 10
D FKV +PT
Sbjct: 20 DWGFKVVQPT 29


>sp|PURP_METTP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothrix thermoacetophila (strain

Query: 1 DMSFKVFE 8
D+ FKVFE
Sbjct: 299 DLDFKVFE 306


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DMSFKVFEPT 10
DM F F PT
Sbjct: 205 DMEFVQFHPT 214


>sp|NADB_PYRHO|L-ASPARTATE oxidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DMSFKVFEPT 10
DM F F PT
Sbjct: 206 DMEFVQFHPT 215


>sp|NADB_PYRAB|L-ASPARTATE oxidase|Pyrococcus abyssi (strain GE5 /

Query: 1 DMSFKVFEPT 10
DM F F PT
Sbjct: 206 DMEFVQFHPT 215


>sp|PURP_PYRNV|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum neutrophilum (strain DSM

Query: 1 DMSFKVFE 8
DMS VFE
Sbjct: 285 DMSISVFE 292


>sp|PURP_PYRIL|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DMSFKVFE 8
DMS VFE
Sbjct: 274 DMSISVFE 281


>sp|PURP_THEKO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Thermococcus kodakarensis (strain ATCC

Query: 1 DMSFKVFE 8
DM F VFE
Sbjct: 273 DMEFVVFE 280


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 1 DMSFKVFE 8
DM F VFE
Sbjct: 275 DMEFVVFE 282




9|SequenceR|50|41|ETNTLDMSFK

>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 TNTLDMSFK 10
TNT ++SFK
Sbjct: 248 TNTFNLSFK 256


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 1 ETNTLDMSF 9
E N+LD+SF
Sbjct: 314 EVNSLDVSF 322


>sp|RPO1C_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus shibatae (strain ATCC

Query: 1 ETNTLDMSF 9
E NTL++SF
Sbjct: 199 EGNTLNISF 207


>sp|RPO1C_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 ETNTLDMSF 9
E NTL++SF
Sbjct: 199 EGNTLNISF 207


>sp|RPO1C_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 ETNTLDMSF 9
E NTL++SF
Sbjct: 199 EGNTLNISF 207


>sp|RPO1C_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 ETNTLDMSF 9
E NTL++SF
Sbjct: 199 EGNTLNISF 207


>sp|RPO1C_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 ETNTLDMSF 9
E NTL++SF
Sbjct: 199 EGNTLNISF 207


>sp|RPO1C_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 ETNTLDMSF 9
E NTL++SF
Sbjct: 199 EGNTLNISF 207


>sp|RPO1C_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 ETNTLDMSF 9
E NTL++SF
Sbjct: 199 EGNTLNISF 207




10|SequenceR|55|46|TTATIETNTL

***** No hits found ******


11|SequenceR|60|51|FSPLSTTATI

>sp|GAD_PICTO|D-GLUCONATE/D-GALACTONATE dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 FSPLSTTATI 10
F P+ T AT+
Sbjct: 303 FGPVQTAATL 312


>sp|MCH_HALHT|MESACONYL-COA hydratase|Haloarcula hispanica (strain ATCC 33960

Query: 2 SPLSTTATI 10
+PLS T+T+
Sbjct: 126 TPLSVTSTV 134


>sp|MCH_HALMA|MESACONYL-COA hydratase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SPLSTTATI 10
+PLS T+T+
Sbjct: 126 TPLSVTSTV 134




12|SequenceR|65|56|DMFTSFSPLS

>sp|Y649_ARCFU|UPF0280 protein AF_0649|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DMFTSFSPL 9
D FTS+ P+
Sbjct: 46 DFFTSYEPI 54


>sp|TAW21_SACS2|TRNA 4-demethylwyosine(37)-methyltransferase Taw21|Saccharolobus

Query: 1 DMFTSFSPLS 10
+MF+ F P S
Sbjct: 123 NMFSGFGPFS 132


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 DMFTSFSPL 9
D+F S+ PL
Sbjct: 277 DLFRSYDPL 285


>sp|COFH_METPE|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanosphaerula palustris (strain ATCC

Query: 3 FTSFSPLS 10
FT F PLS
Sbjct: 248 FTEFVPLS 255


>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain ATCC

Query: 3 FTSFSPLS 10
FT F PLS
Sbjct: 248 FTEFVPLS 255


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 3 FTSFSPLS 10
FT F PLS
Sbjct: 248 FTEFVPLS 255


>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 3 FTSFSPLS 10
FT F PLS
Sbjct: 240 FTEFVPLS 247


>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1 (strain

Query: 3 FTSFSPLS 10
FT F PLS
Sbjct: 248 FTEFVPLS 255


>sp|EPPA_METMP|PREPILIN peptidase EppA|Methanococcus maripaludis (strain DSM 14266

Query: 2 MFTSFSPL 9
MFT+ SPL
Sbjct: 81 MFTALSPL 88


>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MFTSFS 7
MFTSFS
Sbjct: 376 MFTSFS 381


>sp|PRIS_THEVO|DNA primase small subunit PriS|Thermoplasma volcanium (strain ATCC

Query: 1 DMFTSFSPLS 10
D F F PLS
Sbjct: 268 DKFDDFDPLS 277




13|SequenceR|70|61|GTSYNDMFTS

>sp|Y830_METJA|UNCHARACTERIZED protein MJ0830|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GTSYNDMF 8
GT+Y+D+F
Sbjct: 117 GTNYDDLF 124


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 TSYNDMF 8
TS+NDM+
Sbjct: 116 TSFNDMY 122


>sp|DADD_METTP|5'-DEOXYADENOSINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 TSYNDMF 8
T YNDM+
Sbjct: 111 TCYNDMY 117


>sp|GLCU_SACS2|GLUCOSE import system permease protein|Saccharolobus solfataricus (strain

Query: 1 GTSYNDMFTS 10
GT YND F +
Sbjct: 245 GTLYNDTFAA 254


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM 16790

Query: 2 TSYNDMFTS 10
TSY DM T+
Sbjct: 111 TSYADMLTA 119


>sp|AATC_METS3|A-TYPE ATP synthase subunit C|Methanobrevibacter smithii (strain ATCC

Query: 1 GTSYNDMFT 9
GT Y+D+ T
Sbjct: 299 GTKYSDVLT 307


>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 1 GTSYNDMFTS 10
GT ND FT+
Sbjct: 630 GTLTNDFFTT 639


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 1 GTSYNDMFTS 10
GT ND FT+
Sbjct: 630 GTLTNDFFTT 639




14|SequenceR|75|66|PKVDYGTSYN

>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KVDYGTSY 9
KVDYGT Y
Sbjct: 924 KVDYGTDY 931


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 3 VDYGTSY 9
VD+GTSY
Sbjct: 16 VDFGTSY 22


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1 (strain

Query: 3 VDYGTSY 9
VDYGT Y
Sbjct: 1017 VDYGTPY 1023


>sp|HPPA_PYRAE|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Pyrobaculum aerophilum (strain

Query: 4 DYGTSYN 10
DY TSYN
Sbjct: 345 DYYTSYN 351


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 2 KVDYGT 7
KVDYGT
Sbjct: 445 KVDYGT 450


>sp|HCGF_META3|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus aeolicus (strain

Query: 1 PKVDYGTSYN 10
PK DY SY+
Sbjct: 67 PKCDYEYSYS 76




15|SequenceR|80|71|QYLCPPKVDY

>sp|SYS2_METKA|TYPE-2 serine--tRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 YLCPPKVD 9
Y+CPPK D
Sbjct: 271 YVCPPKRD 278


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QYLCPPKVD 9
QY C PK D
Sbjct: 133 QYFCEPKFD 141


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QYLCPPKVD 9
+YLC PK D
Sbjct: 135 RYLCEPKFD 143


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 YLCPPK 7
Y+CPPK
Sbjct: 261 YVCPPK 266


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 YLCPPK 7
Y+CPPK
Sbjct: 260 YVCPPK 265


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QYLCPPKVD 9
+Y+C PK D
Sbjct: 186 EYICEPKFD 194


>sp|DNLJ_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 QYLCPPKVD 9
+Y+C PK D
Sbjct: 143 EYVCEPKFD 151


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YLCPPK 7
Y+CPPK
Sbjct: 273 YVCPPK 278


>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 YLCPPK 7
Y+CPPK
Sbjct: 270 YVCPPK 275


>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 YLCPPK 7
Y+CPPK
Sbjct: 270 YVCPPK 275


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 YLCPPK 7
Y+CPPK
Sbjct: 270 YVCPPK 275


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 YLCPPK 7
Y+CPPK
Sbjct: 270 YVCPPK 275


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 YLCPPK 7
Y+CPPK
Sbjct: 270 YVCPPK 275


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 2 YLCPPKVD 9
Y+C PK D
Sbjct: 134 YVCEPKFD 141


>sp|Y748_ARCFU|UNCHARACTERIZED protein AF_0748|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LCPPKVD 9
LCPP D
Sbjct: 111 LCPPDFD 117


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YLCPPK 7
Y+CPP+
Sbjct: 260 YVCPPQ 265


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 PPKVDY 10
PP VDY
Sbjct: 578 PPSVDY 583


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 PPKVDY 10
PP VDY
Sbjct: 576 PPAVDY 581


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 PPKVDY 10
PP VDY
Sbjct: 576 PPAVDY 581


>sp|T1MH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 4 CPPKVDY 10
CPPK+ Y
Sbjct: 414 CPPKLFY 420


>sp|PYRH_AERPE|URIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 5 PPKVDY 10
PP++DY
Sbjct: 15 PPRLDY 20


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YLCPP 6
+LCPP
Sbjct: 1082 FLCPP 1086


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 YLCPPKVD 9
YL PP++D
Sbjct: 257 YLVPPELD 264


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 PPKVDY 10
PP +DY
Sbjct: 578 PPSIDY 583


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 5 PPKVDY 10
PP +DY
Sbjct: 576 PPSIDY 581


>sp|SYY_METMJ|TYROSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 LCPPKVD 9
CPP+V+
Sbjct: 234 FCPPEVE 240


>sp|AROD_METS3|3-DEHYDROQUINATE dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 CPPKVDY 10
C P VDY
Sbjct: 87 CAPLVDY 93


>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain ATCC

Query: 3 LCPPKVD 9
+CP K+D
Sbjct: 192 ICPDKID 198


>sp|SYY_METHJ|TYROSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LCPPKVD 9
CPP+V+
Sbjct: 234 FCPPEVE 240


>sp|RL30_STAMF|LARGE ribosomal subunit protein uL30|Staphylothermus marinus (strain

Query: 5 PPKVDY 10
PP VDY
Sbjct: 17 PPDVDY 22




16|SequenceR|85|76|GSLPMQYLCP

>sp|DGGGP_METS5|DIGERANYLGERANYLGLYCERYL phosphate synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GSLPMQYL 8
GSLP Q+L
Sbjct: 272 GSLPFQFL 279


>sp|GGGPS_METJA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LPMQYLC 9
+PM YLC
Sbjct: 124 IPMAYLC 130


>sp|Y534_METJA|UNCHARACTERIZED protein MJ0534|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LPMQYLCP 10
L ++Y+CP
Sbjct: 211 LDLEYICP 218


>sp|RL34_PYRHO|LARGE ribosomal subunit protein eL34|Pyrococcus horikoshii (strain ATCC

Query: 4 PMQYLCP 10
PM YLCP
Sbjct: 67 PMPYLCP 73




17|SequenceR|90|81|ISSQQGSLPM

***** No hits found ******


18|SequenceR|95|86|IDEVKISSQQ

>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 IDEVKISSQQ 10
IDE KIS Q+
Sbjct: 232 IDEFKISKQE 241


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IDEVKISSQ 9
ID+VKIS+
Sbjct: 509 IDQVKISAH 517


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IDEVKISSQQ 10
I E+K+SSQ+
Sbjct: 153 IKELKLSSQE 162


>sp|THI4_SULAC|THIAMINE thiazole synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IDEVKIS 7
IDEVKIS
Sbjct: 10 IDEVKIS 16




19|SequenceR|100|91|YNHMQIDEVK

>sp|Y1798_ARCFU|PUTATIVE phosphate permease AF_1798|Archaeoglobus fulgidus (strain ATCC

Query: 2 NHMQIDEVK 10
NH+ +D++K
Sbjct: 126 NHLTLDQIK 134


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YNHMQIDE 8
Y H +IDE
Sbjct: 384 YRHKEIDE 391


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YNHMQIDE 8
Y H +IDE
Sbjct: 384 YRHKEIDE 391


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YNHMQIDEV 9
Y H ++DEV
Sbjct: 40 YEHYEVDEV 48


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YNHMQIDEVK 10
YN +++DE +
Sbjct: 246 YNPLEVDEAR 255


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YNHMQIDEVK 10
Y H+ DE+K
Sbjct: 648 YKHISPDELK 657




20|SequenceR|105|96|HSHQQYNHMQ

>sp|DNAG_METST|DNA primase DnaG|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 SHQQYNHMQ 10
SH YNH Q
Sbjct: 274 SHANYNHNQ 282


>sp|COFG_METVS|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 HQQYNHMQ 10
H++Y H+Q
Sbjct: 221 HEKYGHIQ 228


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 HQQYNHMQ 10
H++Y H+Q
Sbjct: 199 HEKYGHIQ 206


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 3 HQQYNHMQ 10
H++Y H+Q
Sbjct: 221 HEKYGHIQ 228


>sp|COFG_METJA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HQQYNHMQ 10
H++Y H+Q
Sbjct: 221 HEKYGHIQ 228


>sp|ARADH_HALVD|L-ARABINOSE 1-dehydrogenase (NAD(P)(+))|Haloferax volcanii (strain ATCC 29605

Query: 1 HSHQQYN 7
H HQ YN
Sbjct: 107 HVHQMYN 113


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HQQYNHMQ 10
H++Y H+Q
Sbjct: 186 HREYGHIQ 193


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 HQQYNHMQ 10
H++Y H+Q
Sbjct: 186 HREYGHIQ 193


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 HQQYNHMQ 10
H++Y H+Q
Sbjct: 180 HREYGHIQ 187


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 HQQYNHMQ 10
H++Y H+Q
Sbjct: 220 HERYGHIQ 227


>sp|GUAAA_METMJ|GMP synthase [glutamine-hydrolyzing] subunit A|Methanoculleus

Query: 1 HSHQQYNHM 9
++H Q+NH+
Sbjct: 8 NNHGQFNHL 16


>sp|COFG_METKA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 HQQYNHMQ 10
H++Y H+Q
Sbjct: 194 HERYGHVQ 201


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 2 SHQQYNH 8
SH+ +NH
Sbjct: 96 SHESHNH 102




21|SequenceR|110|101|SQPPLHSHQQ

>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 1 SQPPLHSH 8
S PPLH H
Sbjct: 166 SMPPLHEH 173


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 3 PPLHSH 8
PPLH H
Sbjct: 332 PPLHPH 337


>sp|CP119_SULTO|CYTOCHROME P450 119|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SQPPLH 6
S PPLH
Sbjct: 71 SDPPLH 76


>sp|CP119_SULAC|CYTOCHROME P450 119|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SQPPLH 6
S PPLH
Sbjct: 71 SDPPLH 76


>sp|FRHA_METTH|COENZYME F420 hydrogenase subunit alpha|Methanothermobacter

Query: 1 SQPPLHSHQ 9
+QP L SHQ
Sbjct: 206 NQPTLASHQ 214




22|SequenceR|115|106|PMMEESQPPL

>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 2 MMEESQPPL 10
++EE +PPL
Sbjct: 237 LLEELEPPL 245


>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 MEESQPPL 10
+EE QPPL
Sbjct: 402 IEEEQPPL 409




23|SequenceR|120|111|VSGSHPMMEE

>sp|GLKA_PYRHO|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus horikoshii (strain ATCC

Query: 1 VSGSHPMMEE 10
+SG HP+ +E
Sbjct: 234 ISGLHPLTQE 243


>sp|LYEL_HALSA|LYCOPENE elongase/hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VSGSHP 6
VSG+HP
Sbjct: 154 VSGTHP 159


>sp|GSA1_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 1|Cenarchaeum symbiosum (strain A)

Query: 1 VSGSHPMME 9
+SG++P ME
Sbjct: 95 ISGNYPSME 103


>sp|Y34A_METJA|UNCHARACTERIZED protein MJ0347.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSGSHPMMEE 10
+SG HP E+
Sbjct: 156 ISGQHPKEEK 165


>sp|RS4E_METJA|SMALL ribosomal subunit protein eS4|Methanocaldococcus jannaschii

Query: 3 GSHPMME 9
G+HPM E
Sbjct: 35 GAHPMSE 41


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain ATCC

Query: 1 VSGSHPMM 8
VSG+HP++
Sbjct: 257 VSGNHPVV 264


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 GSHPMM 8
GSHP+M
Sbjct: 157 GSHPIM 162


>sp|GLCDH_HALMT|GLUCOSE 1-dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 1 VSGSHPMME 9
V+G HP+ E
Sbjct: 328 VTGVHPLSE 336




24|SequenceR|125|116|SPKYYVSGSH

>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain ATCC

Query: 1 SPKYYVSGSH 10
SP Y VSG+H
Sbjct: 252 SPSYVVSGNH 261


>sp|TRPD_METTH|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 1 SPKYYVSGSH 10
SP+ VSGSH
Sbjct: 66 SPRVRVSGSH 75


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 1 SPKYYVSGSH 10
SP Y V+G+H
Sbjct: 252 SPSYVVTGNH 261


>sp|DNPH1_METBF|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Methanosarcina

Query: 1 SPKYYVSGS 9
SPK ++SGS
Sbjct: 21 SPKIFLSGS 29


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter thermautotrophicus

Query: 2 PKYYVSGSH 10
P Y ++G+H
Sbjct: 253 PSYVITGNH 261


>sp|PUR7_THEVO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 KYYVSGS 9
+YYV+GS
Sbjct: 101 RYYVAGS 107


>sp|KAE1_METS5|TRNA N6-adenosine threonylcarbamoyltransferase|Metallosphaera sedula

Query: 1 SPKYYVSGSH 10
+P Y V G H
Sbjct: 171 APPYIVDGKH 180


>sp|KAE1_SACI7|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 1 SPKYYVSGSH 10
+P Y ++G H
Sbjct: 171 APPYIINGKH 180


>sp|KAE1_SACI6|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 1 SPKYYVSGSH 10
+P Y ++G H
Sbjct: 171 APPYIINGKH 180


>sp|KAE1_SACI4|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 1 SPKYYVSGSH 10
+P Y ++G H
Sbjct: 171 APPYIINGKH 180


>sp|KAE1_SACI3|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 1 SPKYYVSGSH 10
+P Y ++G H
Sbjct: 171 APPYIINGKH 180


>sp|KAE1_SACI2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 1 SPKYYVSGSH 10
+P Y ++G H
Sbjct: 171 APPYIINGKH 180


>sp|KAE1_SACI1|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 1 SPKYYVSGSH 10
+P Y ++G H
Sbjct: 171 APPYIINGKH 180


>sp|KAE1_SULTO|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfurisphaera tokodaii

Query: 1 SPKYYVSGSH 10
+P Y V+G H
Sbjct: 173 APPYIVNGVH 182


>sp|YJ16_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 3 KYYVSG 8
KYY+SG
Sbjct: 263 KYYISG 268


>sp|MRE11_THEVO|DNA double-strand break repair protein|Thermoplasma volcanium (strain

Query: 2 PKYYVSGSH 10
P +YV G H
Sbjct: 78 PVFYVFGDH 86


>sp|KAE1_SULAC|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfolobus acidocaldarius

Query: 1 SPKYYVSGSH 10
+P Y V+G H
Sbjct: 173 APPYVVNGVH 182


>sp|KAE1_HYPBU|TRNA N6-adenosine threonylcarbamoyltransferase|Hyperthermus butylicus

Query: 1 SPKYYVSGSH 10
+P Y VSG H
Sbjct: 200 APPYIVSGLH 209


>sp|KAE1_STAMF|TRNA N6-adenosine threonylcarbamoyltransferase|Staphylothermus marinus

Query: 1 SPKYYVSGSH 10
+P Y V+G H
Sbjct: 172 APPYIVNGKH 181




25|SequenceR|130|121|PTPPSSPKYY

>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 1 PTPPSSPK 8
PTPP +PK
Sbjct: 132 PTPPDAPK 139


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PTPPSSPKY 9
P+PP + KY
Sbjct: 257 PSPPEAQKY 265


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 PTPPSSP 7
P PPSSP
Sbjct: 138 PVPPSSP 144


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 TPPSSPKYY 10
TPP SP Y+
Sbjct: 235 TPPPSPPYH 243


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 1 PTPPSSPKY 9
P+PP+S Y
Sbjct: 670 PSPPNSSAY 678


>sp|Y2133_ARCFU|UNCHARACTERIZED protein AF_2133|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PPSSPKY 9
PPS+P++
Sbjct: 113 PPSNPQF 119


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 PTPPSSP 7
P PPS+P
Sbjct: 142 PVPPSTP 148


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PTPPSSPK 8
P PPSS K
Sbjct: 4 PNPPSSGK 11


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 PPSSPKY 9
PP SP+Y
Sbjct: 512 PPDSPEY 518


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 TPPSSPKYY 10
TP P+Y+
Sbjct: 83 TPSGEPRYF 91


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 PPSSPKYY 10
PPS KY+
Sbjct: 343 PPSKGKYW 350


>sp|Y1427_HALMA|UNCHARACTERIZED protein rrnAC1427|Haloarcula marismortui (strain ATCC 43049

Query: 1 PTPPSSP 7
PTP +SP
Sbjct: 8 PTPATSP 14




26|SequenceR|135|126|FGPTTPTPPS

>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PTTPTPP 9
PT+P+PP
Sbjct: 505 PTSPSPP 511


>sp|Y612_METJA|PROBABLE arogenate/prephenate dehydrogenase|Methanocaldococcus jannaschii

Query: 1 FGPTTPT 7
FGP+TP+
Sbjct: 124 FGPSTPS 130


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGPTTPTPPS 10
F +TP PPS
Sbjct: 1099 FQTSTPYPPS 1108


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 3 PTTPTPP 9
PT P+PP
Sbjct: 505 PTRPSPP 511


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PTTPTPP 9
PT P+PP
Sbjct: 505 PTKPSPP 511


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 TTPTPPS 10
T+P PPS
Sbjct: 2 TSPNPPS 8


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 3 PTTPTP 8
P TPTP
Sbjct: 268 PKTPTP 273


>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FGPTTPTPPS 10
GP TP P +
Sbjct: 299 LGPYTPVPAA 308


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FGPTTPTPP 9
F T PTPP
Sbjct: 118 FFNTKPTPP 126


>sp|PANB_HYPBU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 5 TPTPP 9
TPTPP
Sbjct: 226 TPTPP 230


>sp|DNAG_METST|DNA primase DnaG|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GPTTPT 7
GP TPT
Sbjct: 166 GPNTPT 171


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 2 GPTTPTP 8
GP PTP
Sbjct: 529 GPVNPTP 535


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 5 TPTPP 9
TPTPP
Sbjct: 733 TPTPP 737


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GPTTPTPPS 10
GP+ TPP+
Sbjct: 23 GPSVLTPPT 31


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 2 GPTTP 6
GPTTP
Sbjct: 320 GPTTP 324


>sp|DTDA_AERPE|D-AMINOACYL-TRNA deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPTTPTPP 9
GPTTP+ P
Sbjct: 144 GPTTPSKP 151




27|SequenceR|140|131|SHQVQFGPTT

>sp|TFRA_METTM|FUMARATE reductase (CoM/CoB) subunit A|Methanothermobacter marburgensis

Query: 3 QVQFGPT 9
QVQF PT
Sbjct: 232 QVQFHPT 238


>sp|RS6E_THEAC|SMALL ribosomal subunit protein eS6|Thermoplasma acidophilum (strain ATCC

Query: 4 VQFGPT 9
VQ+GPT
Sbjct: 108 VQYGPT 113


>sp|TRMY_HALSA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halobacterium salinarum

Query: 2 HQVQFGPT 9
H+V+ GPT
Sbjct: 166 HRVRVGPT 173


>sp|TRMY_HALS3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halobacterium salinarum

Query: 2 HQVQFGPT 9
H+V+ GPT
Sbjct: 166 HRVRVGPT 173




28|SequenceR|145|136|DDWMPSHQVQ

>sp|COXX_HYPBU|PROTOHEME IX farnesyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 WMPSH 7
W+PSH
Sbjct: 179 WVPSH 183


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DDWMPSHQ 8
DDW +HQ
Sbjct: 557 DDWAFTHQ 564


>sp|THII_METAC|PROBABLE tRNA sulfurtransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 WMPSHQ 8
W P HQ
Sbjct: 258 WAPGHQ 263


>sp|CDPAS_METPE|CDP-ARCHAEOL synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 WMPSHQV 9
W+P H V
Sbjct: 67 WLPRHTV 73


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DWMPSH 7
DW+ SH
Sbjct: 115 DWLKSH 120


>sp|RS13_HALMA|SMALL ribosomal subunit protein uS13|Haloarcula marismortui (strain

Query: 2 DWMPSHQ 8
+WM +HQ
Sbjct: 91 EWMTNHQ 97


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain

Query: 2 DWMPSHQV 9
+W P H++
Sbjct: 77 EWAPIHEI 84


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 WMPSHQV 9
W P HQ+
Sbjct: 183 WCPRHQM 189




29|SequenceR|150|141|HLSGPDDWMP

>sp|IF2A_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 5 PDDWMP 10
PD+W+P
Sbjct: 156 PDEWLP 161


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 5 PDDWMP 10
PD+W+P
Sbjct: 495 PDEWLP 500


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 PDDWMP 10
PD+W+P
Sbjct: 496 PDEWLP 501


>sp|IF2A_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 5 PDDWMP 10
PD+W+P
Sbjct: 156 PDEWLP 161


>sp|IF2A_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 5 PDDWMP 10
PD+W+P
Sbjct: 156 PDEWLP 161


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PDDWMP 10
PDDW P
Sbjct: 161 PDDWWP 166


>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LSGPDDWMP 10
+S P DW+P
Sbjct: 339 VSSPYDWIP 347


>sp|CBIH_METTH|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanothermobacter

Query: 2 LSGPDDWM 9
+SGPDD M
Sbjct: 327 ISGPDDLM 334


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 SGPDDWMP 10
S DDW+P
Sbjct: 629 SDTDDWIP 636


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LSGPDDWMP 10
L+ DDW+P
Sbjct: 482 LAVSDDWVP 490


>sp|ADEC_METB6|ADENINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 HLSGPD 6
HLSGPD
Sbjct: 201 HLSGPD 206


>sp|METK_THEGJ|S-ADENOSYLMETHIONINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LSGPDDWM 9
+S PDD+M
Sbjct: 226 VSNPDDYM 233


>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PDDWM 9
P+DWM
Sbjct: 95 PEDWM 99


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 PDDWM 9
P+DWM
Sbjct: 212 PEDWM 216


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 PDDWMP 10
P++W+P
Sbjct: 855 PEEWLP 860


>sp|CETZ5_HALVD|TUBULIN-LIKE protein CetZ5|Haloferax volcanii (strain ATCC 29605

Query: 2 LSGPDDWM 9
+SGP +W+
Sbjct: 297 VSGPPEWL 304


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LSGPDDW 8
L+G DDW
Sbjct: 253 LAGADDW 259


>sp|HDRC1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C1|Methanococcus

Query: 2 LSGPDDWM 9
LSG D WM
Sbjct: 69 LSGDDLWM 76


>sp|APGM_AERPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Aeropyrum pernix (strain ATCC 700893

Query: 1 HLSGPDD 7
HL GPD+
Sbjct: 315 HLKGPDE 321


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HLSGPDDWMP 10
H S DD+MP
Sbjct: 44 HFSIGDDYMP 53


>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 1 HLSGPDDWM 9
HL G DW+
Sbjct: 221 HLRGLTDWL 229


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 HLSGPDDWM 9
H+ P DW+
Sbjct: 224 HIDSPRDWI 232


>sp|CBIZ_HALSA|ADENOSYLCOBINAMIDE amidohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LSGPDDWMP 10
++ PDDW P
Sbjct: 38 ITVPDDWAP 46


>sp|Y618_METMP|UNCHARACTERIZED protein MMP0618|Methanococcus maripaludis (strain DSM 14266

Query: 5 PDDW 8
PDDW
Sbjct: 39 PDDW 42


>sp|Y618_METMI|UNCHARACTERIZED protein in radB 5'region|Methanococcus maripaludis (Methanococcus

Query: 5 PDDW 8
PDDW
Sbjct: 39 PDDW 42


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LSGPDDW 8
++GPD W
Sbjct: 366 INGPDKW 372


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 5 PDDWMP 10
P++W+P
Sbjct: 462 PEEWIP 467


>sp|DTDA_NATPD|D-AMINOACYL-TRNA deacylase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 SGPDDW 8
SGPD W
Sbjct: 156 SGPDQW 161


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 2 LSGPDDW 8
++GPD W
Sbjct: 366 INGPDKW 372


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LSGPDDW 8
L G DDW
Sbjct: 271 LCGADDW 277


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 2 LSGPDDW 8
++GPD W
Sbjct: 366 INGPDKW 372


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 5 PDDWM 9
P+DWM
Sbjct: 658 PEDWM 662


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 5 PDDWMP 10
P++W+P
Sbjct: 496 PEEWVP 501


>sp|COFG_METJA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LSGPDDW 8
L+G DDW
Sbjct: 286 LAGVDDW 292


>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 PDDWMP 10
PD W+P
Sbjct: 139 PDPWLP 144


>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LSGPDDWMP 10
L PD W+P
Sbjct: 41 LQAPDVWVP 49


>sp|COBS_THEGJ|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HLSGPDDW 8
HL G DW
Sbjct: 65 HLDGLADW 72


>sp|COBS_PYRHO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HLSGPDDW 8
HL G DW
Sbjct: 65 HLDGLADW 72


>sp|COBS_PYRAB|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 HLSGPDDW 8
HL G DW
Sbjct: 65 HLDGLADW 72


>sp|JAMM2_HALVD|PROBABLE metalloprotease HVO_1016|Haloferax volcanii (strain ATCC 29605

Query: 4 GPDDW 8
GPDDW
Sbjct: 118 GPDDW 122


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 PDDW 8
PDDW
Sbjct: 215 PDDW 218


>sp|COBS_THEKO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 HLSGPDDW 8
HL G DW
Sbjct: 65 HLDGLADW 72


>sp|COBS_PYRFU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HLSGPDDW 8
HL G DW
Sbjct: 65 HLDGLADW 72


>sp|BRIX_PYRAB|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus abyssi

Query: 5 PDDW 8
PDDW
Sbjct: 73 PDDW 76


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 4 GPDDW 8
PDDW
Sbjct: 316 APDDW 320


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 HLSGPDDW 8
+L+ PD+W
Sbjct: 501 NLTTPDEW 508


>sp|RL24_NANEQ|LARGE ribosomal subunit protein uL24|Nanoarchaeum equitans (strain

Query: 5 PDDWMP 10
P DW P
Sbjct: 9 PSDWSP 14




30|SequenceR|155|146|NQHFNHLSGP

>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NQHFNH 6
N HFNH
Sbjct: 229 NTHFNH 234


>sp|PELO_METMJ|PROTEIN pelota homolog|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 HFNHLSGP 10
H +HL GP
Sbjct: 27 HLSHLVGP 34


>sp|AGLS_HALVD|DOLICHOL phosphate-mannose mannosyltransferase|Haloferax volcanii (strain

Query: 2 QHFNHLSG 9
Q F HLSG
Sbjct: 381 QQFAHLSG 388


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 4 FNHLSG 9
FNHL+G
Sbjct: 144 FNHLTG 149


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 4 FNHLSG 9
FNHL+G
Sbjct: 142 FNHLTG 147


>sp|GLYA_METS3|SERINE hydroxymethyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 NQHFNHLSG 9
N H +HL+G
Sbjct: 258 NHHLHHLAG 266


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 NQHFNHLSG 9
N H +H++G
Sbjct: 263 NHHLHHMAG 271


>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NQHFNH 6
N H+NH
Sbjct: 239 NTHYNH 244


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NQHFNHLSG 9
N H +H++G
Sbjct: 261 NHHLHHMAG 269


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 NQHFNHLSG 9
N H +H++G
Sbjct: 261 NHHLHHMAG 269


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NQHFNHLSG 9
N H +H++G
Sbjct: 261 NHHLHHMAG 269


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 NQHFNHLSG 9
N H +H++G
Sbjct: 261 NHHLHHMAG 269


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 1 NQHFNHLSG 9
N H +H++G
Sbjct: 261 NHHLHHMAG 269


>sp|Y1128_METJA|UNCHARACTERIZED protein MJ1128|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NQHFNHL 7
N+H+ HL
Sbjct: 276 NKHYEHL 282


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 3 HFNHLSG 9
HF HL G
Sbjct: 367 HFGHLLG 373




31|SequenceR|160|151|TTAVYNQHFN

>sp|RIBL_PICTO|FAD synthase|Picrophilus torridus (strain ATCC 700027

Query: 5 YNQHFN 10
Y+QHFN
Sbjct: 91 YDQHFN 96


>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 YNQHFN 10
+NQHF+
Sbjct: 91 FNQHFD 96


>sp|THIM_PYRHO|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TTAVYNQH 8
T AVYN H
Sbjct: 177 TFAVYNGH 184




32|SequenceR|165|156|QEIMHTTAVY

>sp|Y3946_HALS3|PUTATIVE HTH-type transcriptional regulatory protein|Halobacterium salinarum

Query: 2 EIMHTTAVY 10
E+ HT AVY
Sbjct: 269 EVTHTRAVY 277


>sp|Y2112_HALSA|PUTATIVE HTH-type transcriptional regulatory protein|Halobacterium salinarum

Query: 2 EIMHTTAVY 10
E+ HT AVY
Sbjct: 269 EVTHTRAVY 277


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IMHTTAVY 10
++H TAVY
Sbjct: 249 LIHATAVY 256


>sp|RS19_IGNH4|SMALL ribosomal subunit protein uS19|Ignicoccus hospitalis (strain KIN4/I

Query: 2 EIMHTTAV 9
E HTTAV
Sbjct: 112 EFSHTTAV 119




33|SequenceR|170|161|VPTKRQEIMH

>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 VPTKRQEIMH 10
VPT R +I+H
Sbjct: 319 VPTYRADILH 328


>sp|Y2613_METAC|UNCHARACTERIZED serpin-like protein MA_2613/MA_2612|Methanosarcina acetivorans

Query: 2 PTKRQEI 8
PTKR+E+
Sbjct: 224 PTKREEV 230


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VPTKRQEIMH 10
VP R +IMH
Sbjct: 319 VPAYRADIMH 328


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 1 VPTKRQEIMH 10
VP R+E+ H
Sbjct: 504 VPVFREEVKH 513




34|SequenceR|175|166|LSLRSVPTKR

>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSLRSVPTK 9
L LRS PTK
Sbjct: 304 LLLRSKPTK 312




35|SequenceR|180|171|QKFSFLSLRS

***** No hits found ******


36|SequenceR|185|176|TGPPSQKFSF

>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 2 GPPSQKFS 9
GPP Q FS
Sbjct: 90 GPPCQDFS 97


>sp|RLME_METTP|RIBOSOMAL RNA large subunit methyltransferase|Methanothrix thermoacetophila

Query: 2 GPPSQKFSF 10
GP Q+F+F
Sbjct: 240 GPVKQRFAF 248


>sp|TOP6A_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GPPSQKFSF 10
G P +KFS+
Sbjct: 6 GKPKEKFSY 14


>sp|AROA_METPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 TGPPSQKFS 9
T PPS+ F+
Sbjct: 16 TAPPSKSFT 24


>sp|RL2_PYRIL|LARGE ribosomal subunit protein uL2|Pyrobaculum islandicum (strain DSM

Query: 1 TGPPSQKFSF 10
T PP QK F
Sbjct: 218 TAPPGQKVGF 227


>sp|RL2_PYRNV|LARGE ribosomal subunit protein uL2|Pyrobaculum neutrophilum (strain DSM

Query: 1 TGPPSQKFSF 10
T PP QK F
Sbjct: 217 TAPPGQKVGF 226


>sp|RL2_PYRAR|LARGE ribosomal subunit protein uL2|Pyrobaculum arsenaticum (strain DSM

Query: 1 TGPPSQKFSF 10
T PP QK F
Sbjct: 218 TAPPGQKVGF 227


>sp|RL2_PYRAE|LARGE ribosomal subunit protein uL2|Pyrobaculum aerophilum (strain ATCC

Query: 1 TGPPSQKFSF 10
T PP QK F
Sbjct: 218 TAPPGQKVGF 227


>sp|FEN_METPE|FLAP endonuclease 1|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 TGPPSQK 7
+GPP QK
Sbjct: 321 SGPPGQK 327


>sp|RL2_PYRCJ|LARGE ribosomal subunit protein uL2|Pyrobaculum calidifontis (strain DSM

Query: 1 TGPPSQKFSF 10
T PP QK F
Sbjct: 216 TAPPGQKVGF 225




37|SequenceR|190|181|CSSVPTGPPS

>sp|PGP_METHJ|PHOSPHOGLYCOLATE phosphatase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CSSVPTG 7
CSSVP G
Sbjct: 209 CSSVPYG 215


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 2 SSVPTGP 8
S +PTGP
Sbjct: 681 SVIPTGP 687


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SVPTGPPS 10
SVPT P S
Sbjct: 84 SVPTAPSS 91


>sp|GLPB_HALSA|PROBABLE anaerobic glycerol-3-phosphate dehydrogenase subunit|Halobacterium

Query: 4 VPTGPPS 10
VP GPPS
Sbjct: 252 VPMGPPS 258


>sp|GLPB_HALS3|PROBABLE anaerobic glycerol-3-phosphate dehydrogenase subunit|Halobacterium

Query: 4 VPTGPPS 10
VP GPPS
Sbjct: 252 VPMGPPS 258


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 5 PTGPPS 10
P GPPS
Sbjct: 114 PNGPPS 119


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 1 CSSVPTGPPS 10
CS+VP P +
Sbjct: 346 CSAVPAHPST 355


>sp|RS25_AERPE|SMALL ribosomal subunit protein eS25|Aeropyrum pernix (strain ATCC 700893

Query: 4 VPTGPP 9
VPT PP
Sbjct: 95 VPTAPP 100




38|SequenceR|195|186|DFRMQCSSVP

>sp|DAPA_METMA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DFRMQCSSVP 10
D ++CS VP
Sbjct: 61 DIAVECSKVP 70


>sp|DAPA_METBF|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DFRMQCSSVP 10
D ++CS VP
Sbjct: 61 DIAVECSKVP 70


>sp|NEP1_THEVO|RIBOSOMAL RNA small subunit methyltransferase|Thermoplasma volcanium (strain

Query: 1 DFRMQCSSVP 10
DFR S++P
Sbjct: 183 DFRSDVSNIP 192


>sp|TRPG_METTM|ANTHRANILATE synthase component 2|Methanothermobacter marburgensis (strain ATCC

Query: 2 FRMQCSSVP 10
R +CS VP
Sbjct: 139 LRCECSGVP 147


>sp|DAPA_METBU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DFRMQCSSVP 10
D ++C++VP
Sbjct: 61 DIAVECANVP 70


>sp|TRMBR_HALSA|HTH-TYPE sugar sensing transcriptional regulator|Halobacterium salinarum

Query: 1 DFRMQCSSVP 10
DF + CS P
Sbjct: 133 DFELVCSLTP 142




39|SequenceR|200|191|VHLPGDFRMQ

>sp|ENDA_HALVD|TRNA-SPLICING endonuclease|Haloferax volcanii (strain ATCC 29605

Query: 1 VHLPGDFRMQ 10
VHLPGD R +
Sbjct: 10 VHLPGDARQR 19


>sp|AROA_NATPD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 HLPGDF 7
H+PGDF
Sbjct: 243 HVPGDF 248


>sp|PRIS_HYPBU|DNA primase small subunit PriS|Hyperthermus butylicus (strain DSM

Query: 1 VHLPGDFRMQ 10
V LPGDF ++
Sbjct: 28 VKLPGDFSLR 37


>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 2 HLPGDFR 8
HLP DFR
Sbjct: 202 HLPVDFR 208


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PGDFRM 9
PGD+RM
Sbjct: 582 PGDYRM 587


>sp|CBIA_HALSA|COBYRINATE a,c-diamide synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LPGDFRMQ 10
LP D RMQ
Sbjct: 347 LPADVRMQ 354


>sp|AROA_PYRAB|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 HLPGDF 7
H+PGD+
Sbjct: 223 HVPGDY 228


>sp|HPCAS_METS5|3-HYDROXYPROPIONYL-COENZYME A synthetase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VHLPGDFRM 9
++ PGDF M
Sbjct: 504 LYYPGDFAM 512


>sp|PSB2_KORCO|PROTEASOME subunit beta 2|Korarchaeum cryptofilum (strain OPF8)

Query: 3 LPGDFR 8
LPGDF+
Sbjct: 51 LPGDFQ 56


>sp|KHSE_METJA|HOMOSERINE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VHLPGDFRM 9
+H+P DF++
Sbjct: 158 LHIPIDFKL 166


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 1 VHLPGDFR 8
+HL GD+R
Sbjct: 363 LHLEGDYR 370


>sp|LPLAC_THEAC|LIPOATE-PROTEIN ligase A subunit 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VHLPGDFRM 9
+H+ GDF M
Sbjct: 36 IHISGDFFM 44


>sp|SAT_IGNH4|SULFATE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PGDFR 8
PGDFR
Sbjct: 225 PGDFR 229




40|SequenceR|205|196|EPNMPVHLPG

>sp|FTSZ1_THEKO|CELL division protein FtsZ 1|Thermococcus kodakarensis (strain ATCC

Query: 2 PNMPVHL 8
PN+P+H+
Sbjct: 204 PNLPIHM 210


>sp|Y891_SULAC|UPF0147 protein Saci_0891|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EPNMPVH 7
+PNMP+H
Sbjct: 66 DPNMPMH 72


>sp|Y460A_SULTO|UPF0147 protein STK_04605|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EPNMPVH 7
+PNMP H
Sbjct: 66 DPNMPTH 72


>sp|Y239_PYRFU|UPF0147 protein PF0239|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EPNMPVH 7
+PNMP+H
Sbjct: 71 DPNMPLH 77


>sp|YJ2B_PYRHO|UPF0147 protein PH1921.2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EPNMPVH 7
+PNMP+H
Sbjct: 71 DPNMPLH 77


>sp|Y1698_PYRAB|UPF0147 protein PYRAB16980|Pyrococcus abyssi (strain GE5 /

Query: 1 EPNMPVH 7
+PNMP+H
Sbjct: 64 DPNMPLH 70


>sp|Y2131_THEKO|UPF0147 protein TK2131|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EPNMPVH 7
+PNMP+H
Sbjct: 61 DPNMPMH 67


>sp|DTDA_METJA|D-AMINOACYL-TRNA deacylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EPNMPVHLPG 10
+P++ VH PG
Sbjct: 60 KPSLTVHTPG 69


>sp|FLAK_METJA|PREFLAGELLIN peptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NMPVHLP 9
NMP+H P
Sbjct: 94 NMPIHTP 100


>sp|YN7A_ARCFU|UPF0147 protein AF_2370.1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EPNMPVHL 8
+PN+P+H+
Sbjct: 63 DPNLPMHV 70


>sp|DTDA_SULTO|D-AMINOACYL-TRNA deacylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PNMPVHLPG 10
P++ VH PG
Sbjct: 55 PSLTVHYPG 63


>sp|Y733_METJA|UNCHARACTERIZED protein MJ0733|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EPNMPVHL 8
+PNMPV +
Sbjct: 20 QPNMPVMM 27


>sp|DTDA_SACI7|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PNMPVHLPG 10
P++ VH PG
Sbjct: 55 PSLTVHYPG 63


>sp|DTDA_SACI6|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PNMPVHLPG 10
P++ VH PG
Sbjct: 55 PSLTVHYPG 63


>sp|DTDA_SACI4|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PNMPVHLPG 10
P++ VH PG
Sbjct: 55 PSLTVHYPG 63


>sp|DTDA_SACI3|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PNMPVHLPG 10
P++ VH PG
Sbjct: 55 PSLTVHYPG 63


>sp|DTDA_SACI2|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PNMPVHLPG 10
P++ VH PG
Sbjct: 55 PSLTVHYPG 63


>sp|DTDA_SACI1|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PNMPVHLPG 10
P++ VH PG
Sbjct: 55 PSLTVHYPG 63


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 EPNMPVHLPG 10
+P++ VH+PG
Sbjct: 86 KPSLTVHVPG 95


>sp|Y6503_SACS2|UPF0147 protein SSO6503|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EPNMPVH 7
+PNMP H
Sbjct: 66 DPNMPTH 72


>sp|Y1489_SACI1|UPF0147 protein YN1551_1489|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 EPNMPVH 7
+PNMP H
Sbjct: 66 DPNMPTH 72


>sp|Y1454_SACI2|UPF0147 protein LS215_1454|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EPNMPVH 7
+PNMP H
Sbjct: 66 DPNMPTH 72


>sp|Y1408_SACI3|UPF0147 protein M1627_1408|Saccharolobus islandicus (strain M.16.27)

Query: 1 EPNMPVH 7
+PNMP H
Sbjct: 66 DPNMPTH 72


>sp|Y1358_SACI4|UPF0147 protein M1425_1358|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EPNMPVH 7
+PNMP H
Sbjct: 66 DPNMPTH 72


>sp|Y1352_SACI7|UPF0147 protein YG5714_1352|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EPNMPVH 7
+PNMP H
Sbjct: 66 DPNMPTH 72


>sp|Y1350_SACI6|UPF0147 protein M164_1350|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EPNMPVH 7
+PNMP H
Sbjct: 66 DPNMPTH 72


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PNMPVHLPG 10
P++ VH PG
Sbjct: 55 PSLTVHYPG 63


>sp|DTDA_METM5|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C5 /

Query: 1 EPNMPVHLPG 10
+P + VH PG
Sbjct: 61 KPTLTVHTPG 70


>sp|Y1407_METTH|UPF0147 protein MTH_1407|Methanothermobacter thermautotrophicus (strain

Query: 1 EPNMPVH 7
+PN+P+H
Sbjct: 79 DPNIPIH 85


>sp|DHYS_THEAC|PROBABLE deoxyhypusine synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 NMPVHLPG 10
N+PV +PG
Sbjct: 183 NIPVFVPG 190


>sp|Y1419_METJA|UPF0147 protein MJ1419|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EPNMPVH 7
+PNMP+H
Sbjct: 71 DPNMPLH 77


>sp|RTCA_METAC|RNA 3'-terminal phosphate cyclase|Methanosarcina acetivorans (strain

Query: 3 NMPVHLPG 10
N+P H+P
Sbjct: 217 NLPAHVPA 224


>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 3 NMPVHLPG 10
N+P H+P
Sbjct: 214 NLPAHVPA 221


>sp|DTDA_METVS|D-AMINOACYL-TRNA deacylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EPNMPVHLPG 10
+P + VH PG
Sbjct: 61 KPTLTVHTPG 70


>sp|Y600_THEAC|UPF0147 protein Ta0600|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EPNMPVH 7
+PN+P H
Sbjct: 64 DPNVPAH 70


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PNMPVHLP 9
PN P+++P
Sbjct: 592 PNRPLYMP 599


>sp|DTDA_METM7|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C7 /

Query: 1 EPNMPVHLPG 10
+P + VH PG
Sbjct: 61 KPTLTVHTPG 70


>sp|DTDA_METMP|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EPNMPVHLPG 10
+P + VH PG
Sbjct: 61 KPTLTVHTPG 70


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PNMPVHLP 9
PN P+++P
Sbjct: 592 PNRPLYMP 599


>sp|Y092_METAC|UPF0147 protein MA_0092|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EPNMPVH 7
+PN+P+H
Sbjct: 72 DPNLPLH 78


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EPNMPVHL 8
+ NMPVH+
Sbjct: 651 QANMPVHV 658


>sp|RL24_STAMF|LARGE ribosomal subunit protein uL24|Staphylothermus marinus (strain

Query: 3 NMPVHL 8
NMP+HL
Sbjct: 18 NMPLHL 23


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PNMPVHL 8
PN P+HL
Sbjct: 49 PNSPMHL 55


>sp|RTCA_METBF|RNA 3'-terminal phosphate cyclase|Methanosarcina barkeri (strain Fusaro

Query: 3 NMPVHLP 9
N+P H+P
Sbjct: 193 NLPAHVP 199


>sp|DHYS_METS5|PROBABLE deoxyhypusine synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EPNMPVHLPG 10
E N P+ +PG
Sbjct: 181 ETNTPIIVPG 190


>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EPNMPVHLP 9
EP PV+LP
Sbjct: 218 EPQKPVNLP 226


>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus

Query: 2 PNMPVHL 8
P++PVHL
Sbjct: 14 PSIPVHL 20


>sp|Y215_METJA|UNCHARACTERIZED protein MJ0215|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PNMPVHL 8
PN P HL
Sbjct: 31 PNFPFHL 37


>sp|Y1385_METMA|UPF0147 protein MM_1385|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EPNMPVH 7
+PN+P+H
Sbjct: 68 DPNLPLH 74


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PNMPVHL 8
PN P HL
Sbjct: 38 PNSPFHL 44


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NMPVHLPG 10
N PVHL G
Sbjct: 222 NKPVHLFG 229


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 3 NMPVHLPG 10
N PVHL G
Sbjct: 221 NKPVHLFG 228


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 3 NMPVHLPG 10
N PVHL G
Sbjct: 221 NKPVHLFG 228


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 3 NMPVHLPG 10
N PVHL G
Sbjct: 221 NKPVHLFG 228


>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 4 MPVHLPG 10
MP H+PG
Sbjct: 37 MPDHVPG 43


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PNMPVHL 8
PN P HL
Sbjct: 37 PNSPFHL 43


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 3 NMPVHLPG 10
N PVHL G
Sbjct: 221 NKPVHLFG 228


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 3 NMPVHLPG 10
N PVHL G
Sbjct: 221 NKPVHLFG 228


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 NMPVHLPG 10
N PVHL G
Sbjct: 221 NKPVHLFG 228


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 NMPVHLPG 10
N PVHL G
Sbjct: 213 NKPVHLFG 220


>sp|DTDA_SULAC|D-AMINOACYL-TRNA deacylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PNMPVHLPG 10
P + VH PG
Sbjct: 55 PALTVHYPG 63


>sp|Y151_ARCFU|UNCHARACTERIZED protein AF_0151|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EPNMPVHLP 9
EP PVH P
Sbjct: 73 EPQQPVHSP 81


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 PNMPVHL 8
PN P HL
Sbjct: 49 PNSPFHL 55




41|SequenceR|210|201|HSGAPEPNMP

>sp|GGGPS_SULTO|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SGAPEPNMP 10
SGAPEP P
Sbjct: 173 SGAPEPIRP 181


>sp|GGGPS_SACS2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SGAPEPNMP 10
SGAPEP P
Sbjct: 187 SGAPEPIRP 195


>sp|GGGPS_SACI7|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 SGAPEPNMP 10
SGAPEP P
Sbjct: 187 SGAPEPIRP 195


>sp|GGGPS_SACI6|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SGAPEPNMP 10
SGAPEP P
Sbjct: 187 SGAPEPIRP 195


>sp|GGGPS_SACI4|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SGAPEPNMP 10
SGAPEP P
Sbjct: 187 SGAPEPIRP 195


>sp|GGGPS_SACI3|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.27)

Query: 2 SGAPEPNMP 10
SGAPEP P
Sbjct: 187 SGAPEPIRP 195


>sp|GGGPS_SACI2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 SGAPEPNMP 10
SGAPEP P
Sbjct: 187 SGAPEPIRP 195


>sp|GGGPS_SACI1|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 SGAPEPNMP 10
SGAPEP P
Sbjct: 187 SGAPEPIRP 195


>sp|PUR7_THEVO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SGAPEPNMP 10
+G PEP++P
Sbjct: 260 NGLPEPDIP 268


>sp|FAU1_IGNH4|PROBABLE ribonuclease FAU-1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 HSGAPEP 7
H G+PEP
Sbjct: 40 HEGSPEP 46


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GAPEPNMP 10
G PEP++P
Sbjct: 261 GMPEPDIP 268


>sp|YA57_NATPD|UNCHARACTERIZED protein NP_1057A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SGAPEPNMP 10
SG+ EPN P
Sbjct: 64 SGSEEPNQP 72


>sp|TRMY_META3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus aeolicus

Query: 1 HSGAPEP 7
H GAP P
Sbjct: 56 HYGAPNP 62


>sp|GGGPS_PYRIL|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 SGAPEPNMP 10
SGAP+P P
Sbjct: 171 SGAPQPAPP 179


>sp|NIFH_METMP|NITROGENASE iron protein|Methanococcus maripaludis (strain DSM 14266

Query: 2 SGAPEPNM 9
SG PEP +
Sbjct: 88 SGGPEPGV 95


>sp|NIFH_METMI|NITROGENASE iron protein|Methanococcus maripaludis (Methanococcus deltae)

Query: 2 SGAPEPNM 9
SG PEP +
Sbjct: 88 SGGPEPGV 95


>sp|NIFH_METAR|NITROGENASE iron protein|Methanocella arvoryzae (strain DSM 22066

Query: 2 SGAPEPNM 9
SG PEP +
Sbjct: 85 SGGPEPGV 92


>sp|NIFH2_METIV|NITROGENASE iron protein 2|Methanobacterium ivanovii

Query: 2 SGAPEPNM 9
SG PEP +
Sbjct: 83 SGGPEPGV 90


>sp|NIFH2_METBA|NITROGENASE iron protein 2|Methanosarcina barkeri

Query: 2 SGAPEPNM 9
SG PEP +
Sbjct: 86 SGGPEPGV 93


>sp|NIFH1_METIV|NITROGENASE iron protein 1|Methanobacterium ivanovii

Query: 2 SGAPEPNM 9
SG PEP +
Sbjct: 89 SGGPEPGV 96


>sp|NIFH1_METBA|NITROGENASE iron protein 1|Methanosarcina barkeri

Query: 2 SGAPEPNM 9
SG PEP +
Sbjct: 88 SGGPEPGV 95


>sp|NIFH1_METTM|NITROGENASE iron protein 1|Methanothermobacter marburgensis (strain ATCC

Query: 2 SGAPEPNM 9
SG PEP +
Sbjct: 88 SGGPEPGV 95


>sp|NIFH1_METTH|NITROGENASE iron protein 1|Methanothermobacter thermautotrophicus (strain

Query: 2 SGAPEPNM 9
SG PEP +
Sbjct: 88 SGGPEPGV 95


>sp|NIFH_METJA|NITROGENASE iron protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SGAPEPNM 9
SG PEP +
Sbjct: 85 SGGPEPGV 92


>sp|NIFH2_METTH|NITROGENASE iron protein 2|Methanothermobacter thermautotrophicus (strain

Query: 2 SGAPEPNM 9
SG PEP +
Sbjct: 82 SGGPEPGV 89


>sp|NIFH_METMA|NITROGENASE iron protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SGAPEPNM 9
SG PEP +
Sbjct: 86 SGGPEPGV 93


>sp|NIFH1_METTL|NITROGENASE iron protein 1|Methanothermococcus thermolithotrophicus

Query: 2 SGAPEPNM 9
SG PEP +
Sbjct: 96 SGGPEPGV 103


>sp|GGGPS_PYRHO|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SGAPEP 7
SGAPEP
Sbjct: 181 SGAPEP 186


>sp|GGGPS_METKA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 SGAPEPNMP 10
SGAPEP P
Sbjct: 172 SGAPEPVPP 180


>sp|NIFH_METVO|NITROGENASE iron protein|Methanococcus voltae

Query: 2 SGAPEPNM 9
SG PEP +
Sbjct: 85 SGGPEPGV 92


>sp|DTDA_HYPBU|D-AMINOACYL-TRNA deacylase|Hyperthermus butylicus (strain DSM 5456

Query: 1 HSGAPEPNMP 10
H+G P P P
Sbjct: 87 HTGNPGPEAP 96


>sp|GGGPS_PYRNV|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 SGAPEPNMP 10
SGAP+P P
Sbjct: 171 SGAPQPAPP 179


>sp|METAA_METII|HOMOSERINE O-acetyltransferase|Methanomassiliicoccus intestinalis (strain

Query: 2 SGAPEPNMP 10
+GAP NMP
Sbjct: 106 TGAPVENMP 114


>sp|RUBPP_HALXS|RIBULOSE-1,5-BISPHOSPHATE 5-phosphatase|Halopiger xanaduensis (strain DSM 18323

Query: 1 HSGAPEP 7
H+G+P P
Sbjct: 78 HTGSPRP 84


>sp|GGGPS_PYRCJ|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 SGAPEPNMP 10
SGAP+P P
Sbjct: 172 SGAPQPVPP 180


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 HSGAPEPN 8
HSG+P P+
Sbjct: 1069 HSGSPAPS 1076


>sp|GGGPS_PYRAR|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SGAPEPNMP 10
SGAP+P P
Sbjct: 171 SGAPQPVPP 179


>sp|Y284_PYRHO|UPF0273 protein PH0284|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HSGAPEPNM 9
H G PE N+
Sbjct: 17 HGGIPERNV 25


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 1 HSGAPEPNM 9
H G PE N+
Sbjct: 17 HGGIPERNV 25


>sp|Y1931_PYRFU|UPF0273 protein PF1931|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HSGAPEPNM 9
H G PE N+
Sbjct: 17 HGGIPERNV 25


>sp|Y1590_THEKO|UPF0273 protein TK1590|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HSGAPEPNM 9
H G PE N+
Sbjct: 17 HGGIPERNV 25


>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HSGAPEPNM 9
H G PE N+
Sbjct: 16 HGGIPERNV 24


>sp|APGM_METS5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Metallosphaera sedula (strain ATCC 51363

Query: 1 HSGAPEPNM 9
HSG P P M
Sbjct: 357 HSGDPVPLM 365


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 5 PEPNMP 10
P PNMP
Sbjct: 197 PSPNMP 202


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 PEPNMP 10
P PNMP
Sbjct: 197 PSPNMP 202


>sp|GGGPS_THEGJ|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 SGAPEPNMP 10
SGAP+P P
Sbjct: 179 SGAPQPVPP 187




42|SequenceR|215|206|GDVVHHSGAP

>sp|GCH1L_METJA|GTP cyclohydrolase 1 type 2|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GDVVHHS 7
GD+ HHS
Sbjct: 194 GDLTHHS 200


>sp|Y208_METBF|UPF0285 protein Mbar_A0208|Methanosarcina barkeri (strain Fusaro /

Query: 2 DVVHHSGAP 10
D + HSG P
Sbjct: 101 DAIRHSGVP 109


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GDVVHHSGAP 10
GD+V G P
Sbjct: 276 GDIVEQEGTP 285


>sp|DTDA_HYPBU|D-AMINOACYL-TRNA deacylase|Hyperthermus butylicus (strain DSM 5456

Query: 4 VHHSGAP 10
VHH+G P
Sbjct: 85 VHHTGNP 91


>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GDVVHHSGAP 10
GD+ GAP
Sbjct: 281 GDIASQEGAP 290


>sp|FENR_SACS2|FERREDOXIN--NADP reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GDVVHHSGAP 10
GD+V G+P
Sbjct: 280 GDIVQMEGSP 289


>sp|THIN_METTH|THIAMINE-PHOSPHATE synthase ThiN|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DVVHHSGA 9
DV++H GA
Sbjct: 147 DVIYHRGA 154


>sp|SMC_METJA|CHROMOSOME partition protein Smc|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GDVVHHSGA 9
GDV+ SGA
Sbjct: 649 GDVIEPSGA 657


>sp|GGGPS_NATPD|GERANYLGERANYLGLYCERYL phosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GDVVHHSGA 9
GD+VH GA
Sbjct: 212 GDLVHDEGA 220


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 1 GDVVHHSGAP 10
G HH+G P
Sbjct: 307 GIAYHHAGLP 316


>sp|SYY_METAC|TYROSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GDVVHHSGA 9
GD+ +HS A
Sbjct: 273 GDITYHSYA 281


>sp|PYRB_PYRAE|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum aerophilum

Query: 1 GDVVHHSGA 9
GDV+ SGA
Sbjct: 68 GDVIGFSGA 76


>sp|IPK_HALVD|ISOPENTENYL phosphate kinase|Haloferax volcanii (strain ATCC 29605

Query: 1 GDVVHHSG 8
GDV+ H+G
Sbjct: 137 GDVISHAG 144


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 GDVVHHSGA 9
G++ H +GA
Sbjct: 228 GEIAHEAGA 236


>sp|GGGPS_HALSA|GERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GDVVHHSG 8
GD+VH +G
Sbjct: 211 GDLVHEAG 218


>sp|GGGPS_HALS3|GERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GDVVHHSG 8
GD+VH +G
Sbjct: 211 GDLVHEAG 218


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 GDVVHHSGA 9
G++ H +GA
Sbjct: 228 GEIAHEAGA 236




43|SequenceR|220|211|VAFTQGDVVH

>sp|GLPK2_SULAC|GLYCEROL kinase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VAFTQGDV 8
+AF QGDV
Sbjct: 250 IAFNQGDV 257


>sp|RL21_METMP|LARGE ribosomal subunit protein eL21|Methanococcus maripaludis (strain

Query: 3 FTQGDVVH 10
+T+GD+VH
Sbjct: 34 YTEGDLVH 41


>sp|RL21_METTH|LARGE ribosomal subunit protein eL21|Methanothermobacter

Query: 2 AFTQGDVVH 10
+F +GD+VH
Sbjct: 33 SFNEGDLVH 41


>sp|RL21_METVS|LARGE ribosomal subunit protein eL21|Methanococcus vannielii (strain

Query: 3 FTQGDVVH 10
+T+GD VH
Sbjct: 34 YTEGDTVH 41


>sp|Y655_ARCFU|METALLOPROTEASE AF_0655|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AFTQGD 7
AFTQGD
Sbjct: 64 AFTQGD 69


>sp|RL21_METS3|LARGE ribosomal subunit protein eL21|Methanobrevibacter smithii (strain

Query: 3 FTQGDVVH 10
F +GD+VH
Sbjct: 34 FEEGDLVH 41


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FTQGDVV 9
+TQGDV+
Sbjct: 1523 YTQGDVI 1529


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FTQGDVV 9
+TQGDV+
Sbjct: 1112 YTQGDVI 1118


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 3 FTQGDVV 9
+TQGDV+
Sbjct: 1112 YTQGDVI 1118


>sp|RFCS_METST|REPLICATION factor C small subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VAFTQGDV 8
V FTQGD+
Sbjct: 187 VYFTQGDM 194


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FTQGDVV 9
+TQGD++
Sbjct: 1609 YTQGDII 1615


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 1 VAFTQGDVV 9
VAF QG+V+
Sbjct: 392 VAFLQGNVL 400


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VAFTQGDVV 9
VAF QG+V+
Sbjct: 392 VAFLQGNVL 400


>sp|ILVC_UNCAG|KETOL-ACID reductoisomerase (NAD(+))|Uncultured archaeon GZfos26G2

Query: 2 AFTQGDVVH 10
A +GDVVH
Sbjct: 74 AAEKGDVVH 82


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 TQGDVV 9
TQGDVV
Sbjct: 334 TQGDVV 339


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VAFTQGD 7
+AFT GD
Sbjct: 218 IAFTDGD 224


>sp|NADA_METMA|QUINOLINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VAFTQGDVVH 10
VA T+G +VH
Sbjct: 211 VASTRGMIVH 220


>sp|DHQS_HALMA|3-DEHYDROQUINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 AFTQGDV 8
AFT GDV
Sbjct: 54 AFTNGDV 60




44|SequenceR|225|216|RIPNPVAFTQ

>sp|PYRB_METLZ|ASPARTATE carbamoyltransferase catalytic subunit|Methanocorpusculum labreanum

Query: 1 RIPNPVAF 8
R P+PVAF
Sbjct: 231 RFPDPVAF 238


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 4 NPVAFTQ 10
+PVAFTQ
Sbjct: 1304 SPVAFTQ 1310


>sp|RL1_CENSY|LARGE ribosomal subunit protein uL1|Cenarchaeum symbiosum (strain A)

Query: 1 RIPNPVAF 8
++P PVAF
Sbjct: 127 KMPTPVAF 134


>sp|CDPAS_METB6|CDP-ARCHAEOL synthase|Methanoregula boonei (strain DSM 21154

Query: 2 IPNPVA 7
IPNPVA
Sbjct: 6 IPNPVA 11


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 1 RIPNPVAFT 9
R P PV FT
Sbjct: 192 RTPVPVVFT 200


>sp|RRP42_PYRHO|EXOSOME complex component Rrp42|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RIPNPVAFTQ 10
RIP PV F +
Sbjct: 191 RIPIPVTFAK 200


>sp|Y1546_ARCFU|UNCHARACTERIZED MscS family protein AF_1546|Archaeoglobus fulgidus (strain ATCC

Query: 1 RIPNPVAFT 9
RIPN FT
Sbjct: 153 RIPNEKVFT 161




45|SequenceR|230|221|MSAPKRIPNP

>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 2 SAPKRIPN 9
S P RIPN
Sbjct: 927 SMPNRIPN 934


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 SAPKRIPN 9
S P RIPN
Sbjct: 927 SIPNRIPN 934


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 SAPKRIPN 9
S P RIPN
Sbjct: 927 SIPNRIPN 934


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 SAPKRIPN 9
S P RIPN
Sbjct: 927 SIPNRIPN 934


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 SAPKRIPN 9
S P RIPN
Sbjct: 927 SIPNRIPN 934


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 SAPKRIPN 9
S P RIPN
Sbjct: 927 SIPNRIPN 934


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 SAPKRIPN 9
S P RIPN
Sbjct: 927 SIPNRIPN 934


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 2 SAPKRIPN 9
S+P +IPN
Sbjct: 927 SSPNKIPN 934


>sp|DNAJ_METMZ|CHAPERONE protein DnaJ|Methanosarcina mazei (Methanosarcina frisia)

Query: 2 SAPKRIPN 9
++PKR PN
Sbjct: 156 TSPKRCPN 163


>sp|DNAJ_METMA|CHAPERONE protein DnaJ|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SAPKRIPN 9
++PKR PN
Sbjct: 156 TSPKRCPN 163


>sp|CP119_SULTO|CYTOCHROME P450 119|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PKRIPNP 10
P R PNP
Sbjct: 300 PDRTPNP 306


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 APKRIPN 9
APK +PN
Sbjct: 380 APKNLPN 386


>sp|CRYD_NATPD|CRYPTOCHROME DASH|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SAPKRIPNP 10
SAP+ +P P
Sbjct: 171 SAPETVPTP 179




46|SequenceR|235|226|LGPFGMSAPK

>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGPFGMSAP 9
L PFG SAP
Sbjct: 136 LPPFGASAP 144


>sp|NTPTH_SULTO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LGPFGMSAPK 10
+GP +S PK
Sbjct: 106 IGPMELSVPK 115


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 FGMSAPK 10
FG+SAP+
Sbjct: 943 FGLSAPE 949


>sp|THI4_SULAC|THIAMINE thiazole synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GPFGMSA 8
GP GMSA
Sbjct: 41 GPAGMSA 47


>sp|RL11_METS3|LARGE ribosomal subunit protein uL11|Methanobrevibacter smithii (strain

Query: 1 LGPFGMS 7
LGPFG++
Sbjct: 25 LGPFGIN 31




47|SequenceR|240|231|AHGIQLGPFG

>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AHGIQLGPFG 10
A+GI++ P+G
Sbjct: 482 AYGIEVAPYG 491


>sp|THIE_PYRHO|THIAMINE-PHOSPHATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AHGIQLGP 8
A G+QLGP
Sbjct: 79 ADGVQLGP 86


>sp|THIE_PYRFU|THIAMINE-PHOSPHATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AHGIQLGP 8
A G+QLGP
Sbjct: 79 ADGVQLGP 86


>sp|THIE_PYRAB|THIAMINE-PHOSPHATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 AHGIQLGP 8
A G+QLGP
Sbjct: 79 ADGVQLGP 86


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 2 HGIQLGPFG 10
HGI PFG
Sbjct: 463 HGIGYFPFG 471


>sp|Y253_METJA|PUTATIVE hydrogenase maturation protease MJ0253|Methanocaldococcus

Query: 1 AHGIQLGPF 9
AH + L PF
Sbjct: 95 AHNVPLAPF 103


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AHGIQLGPFG 10
A+GI+LG G
Sbjct: 16 ANGIKLGKMG 25


>sp|HDRB1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B1|Methanococcus

Query: 3 GIQLGPF 9
GIQL PF
Sbjct: 35 GIQLHPF 41


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HGIQLGP 8
HGI +GP
Sbjct: 269 HGIDMGP 275


>sp|GAPN_THETE|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Thermoproteus tenax

Query: 2 HGIQLGPFG 10
HGI PFG
Sbjct: 455 HGIGYYPFG 463


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HGIQLGP 8
HGI +GP
Sbjct: 269 HGIDMGP 275


>sp|ADHS2_ARCFU|PUTATIVE 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase

Query: 2 HGIQLGP 8
HG+ +GP
Sbjct: 28 HGVSMGP 34


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 2 HGIQLG 7
HGI+LG
Sbjct: 239 HGIELG 244


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HGIQLG 7
HGI+LG
Sbjct: 230 HGIELG 235


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 2 HGIQLG 7
HGI+LG
Sbjct: 475 HGIELG 480


>sp|KCY_METMJ|CYTIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 HGIQLGPFG 10
HG+ L FG
Sbjct: 42 HGMDLADFG 50


>sp|ALF1_THETK|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermoproteus tenax (strain ATCC 35583

Query: 2 HGIQLGP 8
HGI+ GP
Sbjct: 25 HGIEHGP 31




48|SequenceR|245|236|DLLQSAHGIQ

>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 1 DLLQSAHGI 9
DLL+S +GI
Sbjct: 436 DLLKSVYGI 444


>sp|RIMK_METBU|PROBABLE alpha-L-glutamate ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DLLQSAHG 8
DLL+S HG
Sbjct: 248 DLLRSNHG 255


>sp|RIBL_METS3|FAD synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DLLQSAHGI 9
DLL HGI
Sbjct: 11 DLLHPGHGI 19




49|SequenceR|250|241|SPVQTDLLQS

>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 PVQTDLL 8
PV TDLL
Sbjct: 87 PVSTDLL 93




50|SequenceR|255|246|GRSPPSPVQT

>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC 29605

Query: 3 SPPSPVQT 10
SPP P+Q+
Sbjct: 117 SPPEPIQS 124


>sp|RF1_HALWD|PEPTIDE chain release factor subunit|Haloquadratum walsbyi (strain DSM

Query: 3 SPPSPVQT 10
SPP PVQ+
Sbjct: 117 SPPEPVQS 124


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 4 PPSPVQT 10
PP P+QT
Sbjct: 110 PPEPIQT 116


>sp|RF1_HALLT|PEPTIDE chain release factor subunit|Halorubrum lacusprofundi (strain ATCC

Query: 3 SPPSPVQT 10
SPP PV++
Sbjct: 117 SPPQPVES 124


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 4 PPSPVQT 10
PP PV+T
Sbjct: 112 PPEPVKT 118


>sp|RF1_METMP|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain DSM

Query: 4 PPSPVQT 10
PP PV+T
Sbjct: 112 PPEPVKT 118


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7 /

Query: 4 PPSPVQT 10
PP PV+T
Sbjct: 112 PPEPVKT 118


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 4 PPSPVQT 10
PP PV+T
Sbjct: 112 PPEPVKT 118


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5 /

Query: 4 PPSPVQT 10
PP PV+T
Sbjct: 112 PPEPVKT 118


>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 3 SPPSPVQT 10
SPP P+++
Sbjct: 117 SPPDPIES 124


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PPSPVQT 10
PP+P++T
Sbjct: 258 PPTPIET 264


>sp|Y308_METJA|UNCHARACTERIZED protein MJ0308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RSPPSPVQT 10
R+PP P+ T
Sbjct: 82 RNPPEPLAT 90


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 1 GRSPPSPV 8
G+ PPSP+
Sbjct: 326 GKIPPSPL 333


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 4 PPSPVQT 10
PP P++T
Sbjct: 112 PPEPIKT 118


>sp|RF1_HALSA|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 3 SPPSPVQT 10
SPP P+++
Sbjct: 117 SPPQPIES 124


>sp|RF1_HALS3|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 3 SPPSPVQT 10
SPP P+++
Sbjct: 117 SPPQPIES 124


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 4 PPSPVQT 10
PP P++T
Sbjct: 112 PPEPIKT 118


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 1 GRSPPSPV 8
G PPSP+
Sbjct: 328 GEIPPSPM 335




51|SequenceR|260|251|ENSPSGRSPP

>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ENSPSGRSP 9
ENS GR P
Sbjct: 809 ENSIKGRQP 817




52|SequenceR|265|256|VACLGENSPS

>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 VACLGENSP 9
V+ LGEN P
Sbjct: 1016 VSSLGENGP 1024


>sp|RPIA_METVS|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus vannielii (strain ATCC 35089

Query: 1 VACLGENSP 9
V LGEN+P
Sbjct: 139 VDSLGENTP 147


>sp|RPIA_META3|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VACLGENSP 9
V LGEN+P
Sbjct: 134 VDSLGENTP 142




53|SequenceR|270|261|ANDGCVACLG

>sp|LEUC_HALMA|3-ISOPROPYLMALATE dehydratase large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 NDGCVACLG 10
N GC CLG
Sbjct: 405 NAGCSMCLG 413


>sp|HACA_METTH|PROBABLE methanogen homoaconitase large subunit|Methanothermobacter

Query: 2 NDGCVACLG 10
N GC CLG
Sbjct: 361 NPGCGPCLG 369


>sp|LEUC_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NDGCVACLG 10
N C AC+G
Sbjct: 362 NPSCSACMG 370


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NDGCVAC 8
ND CV C
Sbjct: 461 NDKCVIC 467


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 NDGCVAC 8
ND CV C
Sbjct: 461 NDKCVIC 467


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 NDGCVAC 8
ND CV C
Sbjct: 461 NDKCVIC 467


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 NDGCVAC 8
ND CV C
Sbjct: 461 NDKCVIC 467


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 NDGCVAC 8
ND CV C
Sbjct: 461 NDKCVIC 467


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NDGCVAC 8
ND CV C
Sbjct: 461 NDKCVIC 467


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 NDGCVAC 8
ND CV C
Sbjct: 461 NDKCVIC 467


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 4 GCVACLG 10
GC CLG
Sbjct: 407 GCSMCLG 413


>sp|HACA_METMA|PROBABLE methanogen homoaconitase large subunit|Methanosarcina mazei (strain

Query: 1 ANDGCVACLG 10
A GC CLG
Sbjct: 329 ATPGCGPCLG 338


>sp|LEUC_NATPD|3-ISOPROPYLMALATE dehydratase large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 4 GCVACLG 10
GC CLG
Sbjct: 407 GCSMCLG 413


>sp|LEUC_HALLT|3-ISOPROPYLMALATE dehydratase large subunit|Halorubrum lacusprofundi (strain ATCC

Query: 4 GCVACLG 10
GC CLG
Sbjct: 407 GCSMCLG 413


>sp|HACA_METAC|PROBABLE methanogen homoaconitase large subunit|Methanosarcina acetivorans

Query: 1 ANDGCVACLG 10
A GC CLG
Sbjct: 362 ATPGCGPCLG 371


>sp|Y1433_ARCFU|UPF0215 protein AF_1433|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GCVACLG 10
GCV C G
Sbjct: 22 GCVTCGG 28


>sp|TF2B6_HALSA|TRANSCRIPTION initiation factor IIB 6|Halobacterium salinarum (strain ATCC

Query: 1 ANDGCVACLG 10
+ DGC C G
Sbjct: 21 STDGCPECGG 30


>sp|TRUB_HALMA|PROBABLE tRNA pseudouridine synthase B|Haloarcula marismortui (strain ATCC

Query: 3 DGCVACLG 10
DG CLG
Sbjct: 286 DGAAVCLG 293


>sp|LEUC_THEKO|3-ISOPROPYLMALATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 4 GCVACLG 10
GC CLG
Sbjct: 319 GCGPCLG 325


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GCVACLG 10
GC CLG
Sbjct: 319 GCGPCLG 325


>sp|LEUC2_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GCVACLG 10
GC CLG
Sbjct: 319 GCGPCLG 325


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 4 GCVACLG 10
GC CLG
Sbjct: 319 GCGPCLG 325


>sp|RPO3_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo3|Aeropyrum pernix (strain ATCC 700893

Query: 1 ANDGCVACL 9
A D C+ CL
Sbjct: 186 AGDECLECL 194


>sp|LEUC2_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 NDGCVACLG 10
N GC C+G
Sbjct: 353 NPGCGPCVG 361


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 ANDGCVACLG 10
AND C+ G
Sbjct: 222 ANDTCITICG 231


>sp|LEUC2_METKA|3-ISOPROPYLMALATE dehydratase large subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 1 ANDGCVACLG 10
A GC CLG
Sbjct: 337 APPGCGPCLG 346


>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 3 DGCVACLG 10
+GC C+G
Sbjct: 83 EGCDLCMG 90


>sp|RS14Z_THEVO|SMALL ribosomal subunit protein uS14|Thermoplasma volcanium (strain

Query: 3 DGCVAC 8
DGCV C
Sbjct: 16 DGCVRC 21


>sp|RS14Z_THEAC|SMALL ribosomal subunit protein uS14|Thermoplasma acidophilum (strain

Query: 3 DGCVAC 8
DGCV C
Sbjct: 16 DGCVRC 21


>sp|HACA_METJA|METHANOGEN homoaconitase large subunit|Methanocaldococcus jannaschii (strain

Query: 4 GCVACLG 10
GC CLG
Sbjct: 361 GCGPCLG 367




54|SequenceR|275|266|YHQCAANDGC

>sp|Y2106_PYRCJ|UPF0179 protein Pcal_2106|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 QCAANDGC 10
+CA DGC
Sbjct: 97 ECAGCDGC 104


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 3 QCAAND 8
QC AND
Sbjct: 308 QCGAND 313


>sp|COFH2_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina barkeri (strain Fusaro

Query: 3 QCAAND 8
QC AND
Sbjct: 308 QCGAND 313


>sp|COFH2_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina acetivorans (strain

Query: 3 QCAAND 8
QC AND
Sbjct: 308 QCGAND 313


>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain Fusaro

Query: 3 QCAAND 8
QC AND
Sbjct: 305 QCGAND 310


>sp|NUCS_METJA|ENDONUCLEASE NucS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YHQCAAN 7
YH CA N
Sbjct: 114 YHACAFN 120


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 QCAANDGC 10
+CAA GC
Sbjct: 181 ECAAMPGC 188


>sp|HIS6_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 YHQCAAND 8
Y +C ND
Sbjct: 251 YRECTVND 258


>sp|HIS6_METM7|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 YHQCAAND 8
Y +C ND
Sbjct: 251 YRECTVND 258


>sp|HIS6_METM6|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 YHQCAAND 8
Y +C ND
Sbjct: 251 YRECTVND 258


>sp|HIS6_METM5|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 YHQCAAND 8
Y +C ND
Sbjct: 251 YRECTVND 258




55|SequenceR|280|271|CTRVGYHQCA

>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 3 RVGYHQ 8
RVGYH+
Sbjct: 420 RVGYHR 425


>sp|RL3_METKA|LARGE ribosomal subunit protein uL3|Methanopyrus kandleri (strain AV19 /

Query: 3 RVGYHQ 8
+VGYHQ
Sbjct: 258 QVGYHQ 263


>sp|TDH_PYRFU|L-THREONINE 3-dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CTRVGYHQC 9
C R YH C
Sbjct: 103 CKRGQYHVC 111


>sp|TDH_PYRHO|L-THREONINE 3-dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CTRVGYHQC 9
C R YH C
Sbjct: 103 CRRGQYHVC 111


>sp|TDH_PYRAB|L-THREONINE 3-dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 CTRVGYHQC 9
C R YH C
Sbjct: 103 CRRGQYHVC 111


>sp|HACA_METJA|METHANOGEN homoaconitase large subunit|Methanocaldococcus jannaschii (strain

Query: 3 RVGYHQCA 10
+VGY CA
Sbjct: 11 KVGYEVCA 18




56|SequenceR|285|276|GKCGECTRVG

>sp|Y1450_METJA|UNCHARACTERIZED protein MJ1450|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KCGECTR 8
KCGEC R
Sbjct: 121 KCGECAR 127


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5

Query: 1 GKCGECT 7
GKCG CT
Sbjct: 65 GKCGGCT 71


>sp|QUEC_METB6|7-CYANO-7-DEAZAGUANINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 GKCGECT 7
GKCG CT
Sbjct: 192 GKCGACT 198


>sp|MOAA_METM6|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C6 /

Query: 3 CGECTRV 9
CG CTR+
Sbjct: 243 CGHCTRI 249


>sp|MOAA_METVS|PROBABLE GTP 3',8-cyclase|Methanococcus vannielii (strain ATCC 35089

Query: 3 CGECTRV 9
CG CTR+
Sbjct: 242 CGHCTRI 248


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 CGECTRV 9
CGEC R+
Sbjct: 328 CGECKRM 334


>sp|MOAA_METM7|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C7 /

Query: 3 CGECTRV 9
CG CTR+
Sbjct: 243 CGHCTRI 249


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 GECTRV 9
GECTRV
Sbjct: 400 GECTRV 405


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CGECTR 8
CGEC R
Sbjct: 332 CGECKR 337


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CGECTR 8
CGEC R
Sbjct: 332 CGECKR 337


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 CGECTR 8
CGEC R
Sbjct: 332 CGECKR 337


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GKCGEC 6
GKCG C
Sbjct: 256 GKCGHC 261


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GKCGEC 6
GKCG C
Sbjct: 437 GKCGPC 442


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GKCGEC 6
GKCG C
Sbjct: 438 GKCGPC 443


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GKCGEC 6
GKCG C
Sbjct: 435 GKCGPC 440


>sp|PYRC_THEKO|DIHYDROOROTASE kodakarensis (strain ATCC BAA-918

Query: 1 GKCGECTR 8
G CGE +R
Sbjct: 125 GNCGEASR 132


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain

Query: 1 GKCGEC 6
GKCG C
Sbjct: 91 GKCGGC 96


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 CGECTRVG 10
CGEC ++
Sbjct: 334 CGECKQIA 341


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 1 GKCGEC 6
GKCG C
Sbjct: 66 GKCGGC 71


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 1 GKCGEC 6
GKCG C
Sbjct: 67 GKCGGC 72


>sp|ARLMC_PYRFU|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus furiosus

Query: 1 GKCGEC 6
GKCG C
Sbjct: 65 GKCGGC 70


>sp|KPTA_METMA|PROBABLE RNA 2'-phosphotransferase|Methanosarcina mazei (strain ATCC

Query: 1 GKCGECTRVG 10
G C +C R G
Sbjct: 14 GSCQQCKRPG 23


>sp|KPTA_METAC|PROBABLE RNA 2'-phosphotransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 GKCGECTRVG 10
G C +C R G
Sbjct: 14 GSCQQCKRPG 23


>sp|FER1_METJA|UNCHARACTERIZED ferredoxin MJ0061|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KCGECTRV 9
KCGEC +V
Sbjct: 62 KCGECLKV 69


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKCGEC 6
GKC EC
Sbjct: 581 GKCPEC 586


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 1 GKCGEC 6
GKC EC
Sbjct: 452 GKCPEC 457


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 1 GKCGEC 6
GKC EC
Sbjct: 452 GKCPEC 457


>sp|GLYA_METJA|SERINE hydroxymethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 ECTRVG 10
ECTR+G
Sbjct: 368 ECTRLG 373


>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 5 ECTRVG 10
ECTR+G
Sbjct: 368 ECTRLG 373


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GKCGEC 6
GKC EC
Sbjct: 147 GKCDEC 152


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 CGECTRV 9
CGE TRV
Sbjct: 278 CGENTRV 284


>sp|MVHB_METFE|POLYFERREDOXIN protein MvhB|Methanothermus fervidus

Query: 2 KCGECTRV 9
KCGEC +V
Sbjct: 77 KCGECVKV 84


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 GKCGECT 7
G+CG C+
Sbjct: 65 GRCGGCS 71


>sp|RASEA_METAC|ARCHAEOSINE synthase subunit beta|Methanosarcina acetivorans (strain ATCC

Query: 1 GKCGECTRVG 10
GK G CT G
Sbjct: 54 GKAGGCTMCG 63


>sp|ACDG_METAC|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 GKCGECT 7
G+CGE T
Sbjct: 19 GECGEAT 25


>sp|ACDG2_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 GKCGECT 7
G+CGE T
Sbjct: 19 GECGEAT 25


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 CGECTRV 9
C EC RV
Sbjct: 415 CSECGRV 421


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 CGECTRV 9
C EC RV
Sbjct: 173 CSECGRV 179


>sp|SYW_THESM|TRYPTOPHAN--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 3 CGECTR 8
CG+C R
Sbjct: 331 CGQCKR 336


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 CGECTR 8
CG+C R
Sbjct: 331 CGQCKR 336


>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 CGECTR 8
CG+C R
Sbjct: 331 CGQCKR 336


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 2 KCGECTRVG 10
KCG CT +G
Sbjct: 275 KCGGCTVLG 283


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 GKCGEC 6
G+C EC
Sbjct: 857 GRCSEC 862


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 CGECTR 8
CG+C R
Sbjct: 127 CGDCQR 132


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 KCGEC 6
KCGEC
Sbjct: 418 KCGEC 422


>sp|QUEC_METJA|7-CYANO-7-DEAZAGUANINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKCGECTR 8
GKC C R
Sbjct: 207 GKCESCMR 214


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 KCGEC 6
KCGEC
Sbjct: 418 KCGEC 422


>sp|QUEC_METMA|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GKCGECTR 8
GKC C R
Sbjct: 204 GKCESCVR 211


>sp|KPTA_METBF|PROBABLE RNA 2'-phosphotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GKCGECTRVG 10
G C +C R G
Sbjct: 14 GSCLQCKRPG 23


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKCGECTRVG 10
GKC C R G
Sbjct: 453 GKCVVCGREG 462


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 CGECTRV 9
CGEC ++
Sbjct: 335 CGECKQM 341


>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 4 GECTRVG 10
GEC R G
Sbjct: 357 GECARTG 363


>sp|RPO3_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Archaeoglobus fulgidus (strain ATCC

Query: 3 CGECTRV 9
CGEC V
Sbjct: 206 CGECVEV 212


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 KCGEC 6
+CGEC
Sbjct: 501 ECGEC 505


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi

Query: 1 GKCGEC 6
G+CG C
Sbjct: 65 GRCGGC 70


>sp|Y675_METJA|UNCHARACTERIZED protein MJ0675|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KCGECTRVG 10
KCG+ +VG
Sbjct: 354 KCGKIHKVG 362


>sp|RNP4_METS3|RIBONUCLEASE P protein component 4|Methanobrevibacter smithii (strain ATCC

Query: 3 CGECTRV 9
CGEC V
Sbjct: 89 CGECGHV 95


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 2 KCGECTRV 9
+CGEC V
Sbjct: 410 ECGECAVV 417


>sp|Y3412_METJA|UNCHARACTERIZED protein MJECS12|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CGECTRV 9
CG C+++
Sbjct: 43 CGNCSKI 49


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 GKCGECTRVG 10
G C EC +G
Sbjct: 284 GACPECNGLG 293


>sp|Y851_PICTO|UPF0179 protein PTO0851|Picrophilus torridus (strain ATCC 700027

Query: 1 GKCGECT 7
GKC EC+
Sbjct: 26 GKCDECS 32


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 3 CGECTRV 9
CG C+RV
Sbjct: 251 CGRCSRV 257


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 3 CGECTRV 9
CG+C RV
Sbjct: 393 CGDCERV 399


>sp|TF2B1_THEVO|TRANSCRIPTION initiation factor IIB 1|Thermoplasma volcanium (strain ATCC 51530

Query: 3 CGECTRV 9
CGEC V
Sbjct: 35 CGECGAV 41




57|SequenceR|290|281|TRKFFGKCGE

>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 3 KFFGKCG 9
K FGKCG
Sbjct: 63 KVFGKCG 69


>sp|CBIA_METTH|COBYRINATE a,c-diamide synthase|Methanothermobacter thermautotrophicus (strain

Query: 2 RKFFGKCG 9
R FG+CG
Sbjct: 323 RPIFGECG 330


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5

Query: 3 KFFGKCG 9
K FGKCG
Sbjct: 62 KAFGKCG 68


>sp|Y1962_ARCFU|UNCHARACTERIZED protein AF_1962|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RKFFGKCG 9
R+ +GKCG
Sbjct: 20 RRSWGKCG 27


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 3 KFFGKCG 9
K FG+CG
Sbjct: 62 KVFGRCG 68


>sp|KAE1_METAR|TRNA N6-adenosine threonylcarbamoyltransferase|Methanocella arvoryzae

Query: 2 RKFFGKCG 9
RKFFG G
Sbjct: 278 RKFFGDNG 285


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi

Query: 3 KFFGKCG 9
++FG+CG
Sbjct: 62 RYFGRCG 68


>sp|DNAK_METAR|CHAPERONE protein DnaK|Methanocella arvoryzae (strain DSM 22066

Query: 2 RKFFGK 7
+KFFGK
Sbjct: 325 KKFFGK 330


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 KFFGKC 8
K+FG+C
Sbjct: 241 KYFGEC 246


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 KFFGKC 8
K+FG+C
Sbjct: 241 KYFGEC 246


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 KFFGKC 8
K+FG+C
Sbjct: 241 KYFGEC 246


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 KFFGKC 8
K+FG+C
Sbjct: 241 KYFGEC 246


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 KFFGKC 8
K+FG+C
Sbjct: 241 KYFGEC 246


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 3 KFFGKC 8
K+FG+C
Sbjct: 241 KYFGEC 246


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 KFFGKC 8
K+FG+C
Sbjct: 241 KYFGEC 246


>sp|Y909_METM5|UPF0305 protein MmarC5_0909|Methanococcus maripaludis (strain C5 /

Query: 1 TRKFFGKCGE 10
+RKFF K E
Sbjct: 3 SRKFFSKLKE 12


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 2 RKFFGK 7
+KFFGK
Sbjct: 815 KKFFGK 820


>sp|Y665_METMP|UPF0305 protein MMP0665|Methanococcus maripaludis (strain DSM 14266

Query: 1 TRKFFGKCGE 10
+RKFF K E
Sbjct: 3 SRKFFSKLKE 12


>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 KFFGKCGE 10
K FG CG+
Sbjct: 409 KGFGNCGD 416


>sp|Y002_METJA|UNCHARACTERIZED protein MJ0002|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KFFGKC 8
K FGKC
Sbjct: 56 KMFGKC 61


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 5 FGKCG 9
FGKCG
Sbjct: 66 FGKCG 70




58|SequenceR|295|286|ANKQVTRKFF

>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ANKQVTRKFF 10
A Q+T+KF+
Sbjct: 448 ARPQITQKFY 457


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ANKQVTRKFF 10
A Q+T+KF+
Sbjct: 448 ARPQITQKFY 457


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ANKQVTRKFF 10
A Q+T+KF+
Sbjct: 448 ARPQITQKFY 457


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ANKQVTRKFF 10
A Q+T+KF+
Sbjct: 448 ARPQITQKFY 457


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ANKQVTRKFF 10
A Q+T+KF+
Sbjct: 448 ARPQITQKFY 457




59|SequenceR|300|291|LCVYKANKQV

>sp|LEU3_SULTO|3-ISOPROPYLMALATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 CVYKAN 7
CV+KAN
Sbjct: 167 CVHKAN 172


>sp|LEU3_SACS2|3-ISOPROPYLMALATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 CVYKAN 7
CV+KAN
Sbjct: 167 CVHKAN 172


>sp|Y1443_METJA|UPF0132 membrane protein MJ1443|Methanocaldococcus jannaschii (strain

Query: 1 LCVYKANK 8
+C+YKA K
Sbjct: 85 VCMYKAYK 92




60|SequenceR|305|296|CNKNALCVYK

>sp|G3P_METB6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoregula boonei (strain DSM 21154

Query: 2 NKNALCVYK 10
NKN LC ++
Sbjct: 289 NKNELCFFQ 297


>sp|G3P_METKA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 CNKNALC 7
CN ALC
Sbjct: 148 CNTTALC 154


>sp|G3P2_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 CNKNALC 7
CN ALC
Sbjct: 141 CNTTALC 147


>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 CNKNALC 7
CN ALC
Sbjct: 141 CNTTALC 147




61|SequenceR|310|301|RKDVPCNKNA

>sp|Y500_METJA|UNCHARACTERIZED protein MJ0500|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKDVPCNKN 9
RKD+ NKN
Sbjct: 64 RKDLNINKN 72


>sp|PYRH_METMP|URIDYLATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KDVPCNKNA 10
KD CN+NA
Sbjct: 149 KDPRCNENA 157


>sp|MTD_METAC|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 2 KDVPC 6
KDVPC
Sbjct: 84 KDVPC 88


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 2 KDVPC 6
KDVPC
Sbjct: 84 KDVPC 88




62|SequenceR|315|306|CRNRRRKDVP

>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 NRRRKDVP 10
++RRKD+P
Sbjct: 397 DKRRKDIP 404


>sp|TRPC_METTH|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 CRNRRRK 7
CR+RRR+
Sbjct: 255 CRDRRRR 261


>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 CRNRRRKDVP 10
CR+ +R DVP
Sbjct: 289 CRDGKRVDVP 298


>sp|Y085_METJA|UNCHARACTERIZED lipoprotein MJ0085|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NRRRKDVP 10
N R KD+P
Sbjct: 200 NERTKDIP 207


>sp|KPTA_PYRAE|PROBABLE RNA 2'-phosphotransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CRNRRRKDVP 10
C+N RR+ +P
Sbjct: 159 CQNARRRPLP 168




63|SequenceR|320|311|FRCYQCRNRR

>sp|TIAS_ARCFU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Archaeoglobus fulgidus (strain

Query: 1 FRCYQCRNR 9
FRC +CR +
Sbjct: 368 FRCKKCRTK 376


>sp|TDH_THEON|L-THREONINE 3-dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 2 RCYQCRNRR 10
+CY C++ R
Sbjct: 99 KCYACKHNR 107


>sp|TDH_THEKO|L-THREONINE 3-dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RCYQCRNRR 10
+CY C++ R
Sbjct: 99 KCYACKHNR 107


>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 2 RCYQCRNRR 10
RC CRN +
Sbjct: 97 RCLNCRNHQ 105


>sp|TRPC_METTH|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 5 QCRNRR 10
QCR+RR
Sbjct: 254 QCRDRR 259


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain

Query: 2 RCYQCRN 8
RCY C+N
Sbjct: 54 RCYICKN 60


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FRCYQCRN 8
FRC C+N
Sbjct: 84 FRCLHCQN 91


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 2 RCYQCR 7
+CY CR
Sbjct: 297 KCYSCR 302


>sp|TDH_PYRHO|L-THREONINE 3-dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RCYQCR 7
+CY CR
Sbjct: 99 KCYACR 104


>sp|TDH_PYRAB|L-THREONINE 3-dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 2 RCYQCR 7
+CY CR
Sbjct: 99 KCYACR 104


>sp|ARGC_METTP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RCYQCRNRR 10
RCY+ N R
Sbjct: 195 RCYRVTNHR 203


>sp|VHUD_METVO|F420-NON-REDUCING hydrogenase vhu iron-sulfur subunit|Methanococcus voltae

Query: 1 FRCYQC 6
F CYQC
Sbjct: 9 FICYQC 14


>sp|IF2B_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 2 RCYQC 6
RCY+C
Sbjct: 102 RCYEC 106


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 1 FRCYQCR 7
+CY CR
Sbjct: 297 LKCYGCR 303


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FRCYQCRNRR 10
++CY C+ R
Sbjct: 185 YKCYFCQTPR 194


>sp|TFE_METM5|TRANSCRIPTION factor E|Methanococcus maripaludis (strain C5 /

Query: 1 FRCYQC 6
FRC QC
Sbjct: 134 FRCPQC 139


>sp|TFE_META3|TRANSCRIPTION factor E|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FRCYQC 6
FRC QC
Sbjct: 134 FRCSQC 139


>sp|TFE_METVS|TRANSCRIPTION factor E|Methanococcus vannielii (strain ATCC 35089

Query: 1 FRCYQC 6
FRC QC
Sbjct: 134 FRCPQC 139


>sp|TFE_METM7|TRANSCRIPTION factor E|Methanococcus maripaludis (strain C7 /

Query: 1 FRCYQC 6
FRC QC
Sbjct: 134 FRCPQC 139


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 RCYQCRN 8
RC CRN
Sbjct: 427 RCVICRN 433


>sp|TFE_METMP|TRANSCRIPTION factor E|Methanococcus maripaludis (strain DSM 14266

Query: 1 FRCYQC 6
FRC QC
Sbjct: 134 FRCPQC 139


>sp|IF2B_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 RCYQC 6
RCY+C
Sbjct: 102 RCYEC 106


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 RCYQCRN 8
+CY CR+
Sbjct: 288 KCYGCRD 294


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 CYQC 6
CYQC
Sbjct: 3 CYQC 6


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 3 CYQC 6
CYQC
Sbjct: 3 CYQC 6


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FRCYQC 6
++CY C
Sbjct: 656 YKCYNC 661


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 RCYQCRN 8
+CY CR+
Sbjct: 282 KCYGCRD 288


>sp|HDRC1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C1|Methanococcus

Query: 2 RCYQC 6
+CYQC
Sbjct: 33 KCYQC 37


>sp|ENDA_PICTO|TRNA-SPLICING endonuclease|Picrophilus torridus (strain ATCC 700027

Query: 3 CYQCRNRR 10
C+ CR R
Sbjct: 85 CFMCRKSR 92


>sp|Y830_METJA|UNCHARACTERIZED protein MJ0830|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RCYQCR 7
RCY C+
Sbjct: 90 RCYLCK 95


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 2 RCYQCRN 8
+CY CR+
Sbjct: 282 KCYGCRD 288


>sp|IF2B_PICTO|TRANSLATION initiation factor 2 subunit|Picrophilus torridus (strain ATCC

Query: 3 CYQCRN 8
CY+C++
Sbjct: 103 CYECKS 108




64|SequenceR|325|316|ALCKQFRCYQ

>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CKQFRCYQ 10
C + RCY+
Sbjct: 135 CSELRCYR 142


>sp|GLYA_NATPD|SERINE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ALCKQFRCYQ 10
ALC+++ YQ
Sbjct: 406 ALCEEYPLYQ 415




65|SequenceR|330|321|KVMGVALCKQ

>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 MGVALCK 9
MGVA+C+
Sbjct: 240 MGVAICE 246




66|SequenceR|335|326|TRVVEKVMGV

>sp|MIG_AERPE|THYMINE-DNA glycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RVVEKVMGV 10
R++E+V+GV
Sbjct: 150 RILERVLGV 158


>sp|MIG_PYRAE|THYMINE/URACIL-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RVVEKVMGV 10
RV+E+V G+
Sbjct: 153 RVIERVFGI 161


>sp|RS8E_PYRAE|SMALL ribosomal subunit protein eS8|Pyrobaculum aerophilum (strain ATCC

Query: 1 TRVVEKVMG 9
TR+VE+V G
Sbjct: 46 TRIVERVRG 54


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 2 RVVEKVMG 9
RV+E+V+G
Sbjct: 870 RVIERVIG 877


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RVVEKVMGV 10
R VEK +GV
Sbjct: 904 RYVEKALGV 912


>sp|MOAC_THEKO|PROBABLE cyclic pyranopterin monophosphate synthase|Thermococcus

Query: 2 RVVEKVMG 9
RVVEKV G
Sbjct: 147 RVVEKVKG 154


>sp|MOAC_ARCFU|PROBABLE cyclic pyranopterin monophosphate synthase|Archaeoglobus fulgidus

Query: 2 RVVEKVMG 9
RVVEKV G
Sbjct: 146 RVVEKVKG 153




67|SequenceR|340|331|GKLSDTRVVE

>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC

Query: 1 GKLSDTRV 8
G +SDTR+
Sbjct: 63 GSMSDTRI 70


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC

Query: 1 GKLSDTRV 8
G +SDTR+
Sbjct: 63 GSMSDTRI 70


>sp|ENDA_METVS|TRNA-SPLICING endonuclease|Methanococcus vannielii (strain ATCC 35089

Query: 1 GKLSDTRVV 9
KLSD R+V
Sbjct: 11 AKLSDERIV 19


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 GKLSDTRVV 9
GK++D RV+
Sbjct: 408 GKITDPRVI 416


>sp|IF6_HALWD|TRANSLATION initiation factor 6|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GKLSDTRVV 9
GKL+D R V
Sbjct: 135 GKLADVRTV 143


>sp|ENDA_METMP|TRNA-SPLICING endonuclease|Methanococcus maripaludis (strain DSM 14266

Query: 1 GKLSDTRVV 9
KLSD R+V
Sbjct: 11 AKLSDERIV 19


>sp|RS8E_STAMF|SMALL ribosomal subunit protein eS8|Staphylothermus marinus (strain

Query: 1 GKLSDTRVVE 10
GK++ TR++E
Sbjct: 71 GKVTKTRILE 80


>sp|FEN_METTH|FLAP endonuclease 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GKLSDTRVVE 10
GKL D ++E
Sbjct: 192 GKLEDPEIIE 201




68|SequenceR|345|336|LRGRRGKLSD

>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LRGRRGKLSD 10
++GRRG++ D
Sbjct: 645 IQGRRGRVDD 654


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 LRGRRGKLSD 10
++GRRG++ D
Sbjct: 645 IQGRRGRVDD 654


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 LRGRRGKLSD 10
++GRRG++ D
Sbjct: 644 IQGRRGRVDD 653


>sp|GCSPA_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 LRGRRGKLSD 10
LRG R +LSD
Sbjct: 53 LRGVRRRLSD 62


>sp|GCSPA_HALS3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 LRGRRGKLSD 10
LRG R +LSD
Sbjct: 53 LRGVRRRLSD 62


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LRGRRGKLSD 10
++GRRG++ D
Sbjct: 644 VQGRRGRVDD 653


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 1 LRGRRGKLSD 10
++GRRG++ D
Sbjct: 644 VQGRRGRVDD 653


>sp|DEGLY_PYRAB|DEGLYCASE PYRAB04690|Pyrococcus abyssi (strain GE5 /

Query: 1 LRGRRG 6
LRGRRG
Sbjct: 112 LRGRRG 117


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 2 RGRRGKLSD 10
+GRR +LSD
Sbjct: 155 KGRRVRLSD 163


>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 1 LRGRRGKLSD 10
++GRRG++ D
Sbjct: 645 IQGRRGQVFD 654


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LRGRRGKLSD 10
++GRRG++ D
Sbjct: 645 IQGRRGQVFD 654


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 4 RRGKLSD 10
R+GKLSD
Sbjct: 543 RQGKLSD 549


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LRGRRGKLSD 10
++GRRG + D
Sbjct: 645 IQGRRGSVLD 654


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 1 LRGRRGK 7
L+G+RGK
Sbjct: 19 LKGKRGK 25




69|SequenceR|350|341|KPKSPLRGRR

>sp|DAPB_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 PKSPLRGR 9
P +PLRGR
Sbjct: 36 PGTPLRGR 43


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 KPKSPLRGR 9
+PKSP+R R
Sbjct: 668 EPKSPVRWR 676


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PKSPLRGR 9
P PL+GR
Sbjct: 406 PDGPLKGR 413


>sp|Y3504_METJA|UNCHARACTERIZED protein MJECL04|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KSPLRGRR 10
KSPL GR+
Sbjct: 143 KSPLYGRK 150


>sp|MTM1_METJA|TYPE II methyltransferase M.MjaI|Methanocaldococcus jannaschii (strain

Query: 1 KPKSPLR 7
KPK PLR
Sbjct: 184 KPKDPLR 190


>sp|TRPC_METKA|INDOLE-3-GLYCEROL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 KPKSPLRGR 9
KP SP +GR
Sbjct: 45 KPTSPSQGR 53




70|SequenceR|355|346|PEQPSKPKSP

>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PEQPSKPK 8
PE P+KPK
Sbjct: 88 PEDPNKPK 95


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PEQPSKPK 8
PE P+KPK
Sbjct: 88 PEDPNKPK 95


>sp|Y160_METLZ|PUTATIVE HTH-type transcriptional regulatory protein|Methanocorpusculum

Query: 1 PEQPSKPKSP 10
PE ++PK P
Sbjct: 209 PESDAQPKRP 218


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PEQPSKPKSP 10
PE S+P SP
Sbjct: 507 PEYKSRPLSP 516


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 1 PEQPSKP 7
P+QP KP
Sbjct: 276 PDQPRKP 282


>sp|RS13_SULAC|SMALL ribosomal subunit protein uS13|Sulfolobus acidocaldarius (strain

Query: 1 PEQPSKPKSP 10
P+Q +KP P
Sbjct: 153 PQQQAKPAGP 162


>sp|PUR2_METBU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PEQPSKPK 8
P++PSK K
Sbjct: 342 PDEPSKDK 349


>sp|ENDA_SULAC|TRNA-SPLICING endonuclease|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PEQPSKPKSP 10
P +KPKSP
Sbjct: 31 PLDITKPKSP 40




71|SequenceR|360|351|PSPPSPEQPS

>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 1 PSPPSPEQP 9
P+PPSP+ P
Sbjct: 192 PAPPSPDDP 200


>sp|BACS1_HALSA|SENSORY rhodopsin-1|Halobacterium salinarum (strain ATCC 700922

Query: 2 SPPSPEQPS 10
SPP+PEQ +
Sbjct: 224 SPPAPEQAT 232


>sp|BACS1_HALS3|SENSORY rhodopsin-1|Halobacterium salinarum (strain ATCC 29341

Query: 2 SPPSPEQPS 10
SPP+PEQ +
Sbjct: 224 SPPAPEQAT 232


>sp|PCNA_METS3|DNA polymerase sliding clamp|Methanobrevibacter smithii (strain ATCC

Query: 1 PSPPSPEQPS 10
P+PP E P+
Sbjct: 121 PTPPELEHPA 130


>sp|CBIZ_METMA|ADENOSYLCOBINAMIDE amidohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SPPSPEQ 8
+PPSPE+
Sbjct: 43 NPPSPEE 49


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PPSPEQP 9
PPSP+ P
Sbjct: 260 PPSPDNP 266


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PPSPEQPS 10
P +PE+PS
Sbjct: 828 PATPEKPS 835


>sp|HEM1_HYPBU|GLUTAMYL-TRNA reductase|Hyperthermus butylicus (strain DSM 5456

Query: 2 SPPSPEQP 9
+PP+ EQP
Sbjct: 267 NPPAVEQP 274


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PSPPSPEQP 9
P+P P QP
Sbjct: 83 PNPQDPNQP 91


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 PSPPSPE 7
P PP PE
Sbjct: 1243 PEPPKPE 1249


>sp|TFE_PYRFU|TRANSCRIPTION factor E|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SPPSPEQP 9
SPP E+P
Sbjct: 172 SPPKEEKP 179


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 PSPPSPE 7
P PP+PE
Sbjct: 687 PIPPAPE 693


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 PSPPSPE 7
P PP+PE
Sbjct: 687 PIPPAPE 693


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 3 PPSPE 7
PPSPE
Sbjct: 130 PPSPE 134


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 PSPPSPE 7
P PP+PE
Sbjct: 687 PIPPAPE 693


>sp|HMEC_ARCPA|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus profundus

Query: 3 PPSPE 7
PPSPE
Sbjct: 223 PPSPE 227


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 PSPPSPE 7
P PP PE
Sbjct: 725 PEPPKPE 731


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 PSPPSPE 7
P PP PE
Sbjct: 725 PEPPRPE 731


>sp|SYN_PYRHO|ASPARAGINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PSPPSPEQPS 10
P P +PEQ S
Sbjct: 105 PIPENPEQAS 114


>sp|SYN_PYRAB|ASPARAGINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PSPPSPEQPS 10
P P +PEQ S
Sbjct: 105 PIPENPEQAS 114


>sp|SYN_PYRFU|ASPARAGINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PSPPSPEQPS 10
P P +PEQ S
Sbjct: 105 PIPENPEQAS 114


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PSPPSP 6
P PPSP
Sbjct: 42 PRPPSP 47


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PPSPE 7
PPSPE
Sbjct: 38 PPSPE 42


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 PPSPE 7
PPSPE
Sbjct: 686 PPSPE 690


>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 3 PPSPEQP 9
PP PE P
Sbjct: 443 PPVPETP 449


>sp|FRHG_METTH|COENZYME F420 hydrogenase subunit gamma|Methanothermobacter

Query: 3 PPSPE 7
PPSPE
Sbjct: 133 PPSPE 137


>sp|FRHG_METJA|COENZYME F420 hydrogenase subunit gamma|Methanocaldococcus jannaschii

Query: 3 PPSPE 7
PPSPE
Sbjct: 129 PPSPE 133




72|SequenceR|365|356|ILSVPPSPPS

>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 4 VPPSPP 9
VPP+PP
Sbjct: 208 VPPAPP 213


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 4 VPPSPP 9
VPP+PP
Sbjct: 208 VPPAPP 213


>sp|TRUA_THEKO|TRNA pseudouridine synthase A|Thermococcus kodakarensis (strain ATCC

Query: 4 VPPSPP 9
+PP+PP
Sbjct: 212 IPPAPP 217


>sp|TRUA_THESM|TRNA pseudouridine synthase A|Thermococcus sibiricus (strain DSM 12597

Query: 4 VPPSPP 9
+PP+PP
Sbjct: 211 LPPAPP 216


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 4 VPPSPP 9
VPP+PP
Sbjct: 212 VPPAPP 217


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 4 VPPSPPS 10
VPP PPS
Sbjct: 377 VPPRPPS 383


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 4 VPPSPPS 10
VPP PPS
Sbjct: 377 VPPRPPS 383


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 ILSVPPSPP 9
+L PP+PP
Sbjct: 55 VLYGPPNPP 63


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 4 VPPSPPS 10
VPP PPS
Sbjct: 377 VPPRPPS 383


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 4 VPPSPP 9
+PPSPP
Sbjct: 723 LPPSPP 728


>sp|AROA_METM7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 ILSVPPS 7
ILS PPS
Sbjct: 13 ILSAPPS 19


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 ILSVPPS 7
ILS PPS
Sbjct: 13 ILSAPPS 19


>sp|FRHG_METTH|COENZYME F420 hydrogenase subunit gamma|Methanothermobacter

Query: 2 LSVPPSPPS 10
L++P PPS
Sbjct: 127 LAIPGCPPS 135


>sp|AROA_METM5|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 ILSVPPS 7
ILS PPS
Sbjct: 13 ILSAPPS 19


>sp|CS1F2_THETK|CRISPR-ASSOCIATED endonuclease Cas1/endonuclease Cas2 fusion|Thermoproteus tenax

Query: 2 LSVPPSPPS 10
L +PP PP+
Sbjct: 250 LRIPPRPPA 258


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 PPSPP 9
PPSPP
Sbjct: 237 PPSPP 241


>sp|TBPD_HALSA|TATA-BOX-BINDING protein D|Halobacterium salinarum (strain ATCC 700922

Query: 2 LSVPPSPP 9
+ +PPSPP
Sbjct: 91 IDIPPSPP 98




73|SequenceR|370|361|RVLASILSVP

>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 1 RVLASILSVP 10
++LAS LS+P
Sbjct: 452 KILASGLSIP 461


>sp|MFNA_HALMA|PROBABLE L-aspartate decarboxylase|Haloarcula marismortui (strain ATCC

Query: 1 RVLASILSVP 10
RVL+S+ +VP
Sbjct: 12 RVLSSMCTVP 21


>sp|MFNA_ARCFU|PROBABLE L-aspartate decarboxylase|Archaeoglobus fulgidus (strain ATCC

Query: 1 RVLASILSVP 10
RVL+S+ +VP
Sbjct: 19 RVLSSMCTVP 28


>sp|HIS6_METS5|IMIDAZOLE glycerol phosphate synthase subunit|Metallosphaera sedula (strain

Query: 1 RVLASILSVP 10
R AS+LS+P
Sbjct: 67 RETASVLSIP 76




74|SequenceR|375|366|SDVHARVLAS

>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DVHARVLAS 10
DV+ RVLAS
Sbjct: 121 DVYERVLAS 129


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 SDVHARVLAS 10
+DV ARVL+S
Sbjct: 966 NDVAARVLSS 975


>sp|RS3_METTP|SMALL ribosomal subunit protein uS3|Methanothrix thermoacetophila

Query: 1 SDVHARVLAS 10
SD++ARV+A+
Sbjct: 88 SDLNARVVAN 97


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 2 DVHARVLAS 10
D H RVLA+
Sbjct: 107 DTHYRVLAN 115


>sp|CDC6_PYRFU|ORC1-TYPE DNA replication protein|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DVHARVLAS 10
D H RVLA+
Sbjct: 108 DTHYRVLAN 116


>sp|CDC6_PYRHO|ORC1-TYPE DNA replication protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DVHARVLAS 10
D H RVLA+
Sbjct: 107 DTHYRVLAN 115




75|SequenceR|380|371|TMAPNSDVHA

>sp|CIMA_ARCFU|PUTATIVE (R)-citramalate synthase CimA|Archaeoglobus fulgidus (strain ATCC

Query: 2 MAPNSDVH 9
+AP+SD+H
Sbjct: 93 VAPSSDIH 100


>sp|DHQS_METPE|3-DEHYDROQUINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 TMAPNSDV 8
T+APN D+
Sbjct: 43 TIAPNGDL 50


>sp|TRM1_PYRFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus furiosus

Query: 2 MAPNSD 7
MAPN D
Sbjct: 34 MAPNRD 39




76|SequenceR|385|376|SYDLSTMAPN

>sp|Y560_METJA|UNCHARACTERIZED protein MJ0560|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SYDLSTMAPN 10
SYD MAP+
Sbjct: 17 SYDFEFMAPD 26


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 2 YDLSTMAPN 10
+ LST APN
Sbjct: 632 FGLSTRAPN 640


>sp|Y1069_METJA|UNCHARACTERIZED glycosyltransferase MJ1069|Methanocaldococcus jannaschii (strain

Query: 1 SYDLSTMAPN 10
+YD+ APN
Sbjct: 36 NYDIYIFAPN 45




77|SequenceR|390|381|NAQFRSYDLS

>sp|RLME_METST|RIBOSOMAL RNA large subunit methyltransferase|Methanosphaera stadtmanae

Query: 4 FRSYDLS 10
FR+YDLS
Sbjct: 132 FRAYDLS 138


>sp|PURA_NATPD|ADENYLOSUCCINATE synthetase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 AQFRSYD 8
A+FRS+D
Sbjct: 394 AEFRSFD 400


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 QFRSYD 8
QF+SYD
Sbjct: 273 QFKSYD 278


>sp|AROC_METTH|CHORISMATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 AQFRSYD 8
A+FR+YD
Sbjct: 120 ARFRNYD 126


>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 AQFRSYDL 9
A FR YDL
Sbjct: 205 APFRKYDL 212




78|SequenceR|395|386|MQYDPNAQFR

>sp|RL5_METBF|LARGE ribosomal subunit protein uL5|Methanosarcina barkeri (strain Fusaro

Query: 1 MQYDPN 6
M+YDPN
Sbjct: 111 MKYDPN 116


>sp|RL5_METMA|LARGE ribosomal subunit protein uL5|Methanosarcina mazei (strain ATCC

Query: 1 MQYDPN 6
M+YDPN
Sbjct: 111 MRYDPN 116


>sp|RL5_METBU|LARGE ribosomal subunit protein uL5|Methanococcoides burtonii (strain DSM

Query: 1 MQYDPN 6
M+YDPN
Sbjct: 111 MRYDPN 116


>sp|RL5_METAC|LARGE ribosomal subunit protein uL5|Methanosarcina acetivorans (strain

Query: 1 MQYDPN 6
M+YDPN
Sbjct: 107 MRYDPN 112


>sp|Y988_METJA|UNCHARACTERIZED protein MJ0988|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QYDPNAQFR 10
Q +PN +FR
Sbjct: 37 QLNPNGKFR 45


>sp|PURP_NITMS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 YDPNAQF 9
YD NAQF
Sbjct: 280 YDENAQF 286


>sp|PELO_SACS2|PROTEIN pelota homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 QYDPNA 7
QYDP+A
Sbjct: 183 QYDPDA 188


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 QYDPNA 7
QYDP+A
Sbjct: 10 QYDPDA 15


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 QYDPNA 7
QYDP+A
Sbjct: 10 QYDPDA 15


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MQYDPNAQF 9
+ YDPN ++
Sbjct: 280 LMYDPNDEY 288


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MQYDPNAQF 9
+ YDPN ++
Sbjct: 282 LMYDPNDEY 290




79|SequenceR|400|391|TDDGSMQYDP

>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 2 DDGSMQYD 9
DDGS+ YD
Sbjct: 247 DDGSINYD 254


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GSMQYDP 10
G MQY+P
Sbjct: 164 GDMQYNP 170


>sp|SPEE_PYRIL|POLYAMINE aminopropyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 GSMQYDP 10
GS++YDP
Sbjct: 243 GSLKYDP 249


>sp|PIMT1_ARCFU|PROTEIN-L-ISOASPARTATE O-methyltransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DGSMQYDP 10
DGS+ Y+P
Sbjct: 135 DGSLGYEP 142


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TDDGSMQYD 9
T DG M+YD
Sbjct: 318 TADGPMEYD 326


>sp|SPEE_PYRAR|POLYAMINE aminopropyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 GSMQYDP 10
GS++YDP
Sbjct: 243 GSLKYDP 249


>sp|PIMT1_METAC|PROTEIN-L-ISOASPARTATE O-methyltransferase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DDGSMQY 8
DDGSM Y
Sbjct: 172 DDGSMGY 178


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TDDGSMQYDP 10
+D G+M+Y P
Sbjct: 231 SDSGNMRYYP 240


>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GSMQYDP 10
GS+ YDP
Sbjct: 129 GSVSYDP 135


>sp|GLNB2_METIV|NITROGEN fixation nifHD region GlnB-like|Methanobacterium ivanovii

Query: 2 DDGSMQYDP 10
++GSM+Y P
Sbjct: 58 EEGSMRYIP 66


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TDDGSMQYDP 10
+D G+M+Y P
Sbjct: 232 SDSGNMRYYP 241


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 TDDGSMQYDP 10
+D G M+Y P
Sbjct: 212 SDHGHMRYGP 221


>sp|SPEE_PYRCJ|POLYAMINE aminopropyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 GSMQYDP 10
GS++YDP
Sbjct: 243 GSLRYDP 249


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TDDGSMQYDP 10
+D G+M+Y P
Sbjct: 232 SDSGNMRYYP 241


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TDDGSMQYDP 10
+D G+M+Y P
Sbjct: 232 SDSGNMRYYP 241


>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 TDDGSMQYDP 10
+D G+M+Y P
Sbjct: 218 SDPGNMRYYP 227


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TDDGSMQY 8
T DGS QY
Sbjct: 101 TADGSFQY 108


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 2 DDGSMQY 8
DDGS+ Y
Sbjct: 241 DDGSLHY 247




80|SequenceR|405|396|QQIHQTDDGS

>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 1 QQIHQTDDG 9
++IH+ DDG
Sbjct: 202 KKIHRRDDG 210


>sp|PSA_HALWD|PROTEASOME subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QQIHQTDD 8
++IH+TDD
Sbjct: 67 EKIHKTDD 74


>sp|SYS_KORCO|SERINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 HQTDDGS 10
HQ +DGS
Sbjct: 419 HQREDGS 425




81|SequenceR|410|401|LLDYFQQIHQ

>sp|GATC_METTP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Methanothrix thermoacetophila (strain

Query: 1 LLDYFQQIHQ 10
+LDYFQQ+ +
Sbjct: 33 ILDYFQQLDE 42


>sp|Y863_ARCFU|UNCHARACTERIZED protein AF_0863|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LDYFQQIH 9
LD+F+ IH
Sbjct: 157 LDFFRNIH 164


>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LDYFQQIHQ 10
L +FQ IHQ
Sbjct: 292 LYFFQAIHQ 300


>sp|G3P2_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LDYFQQIHQ 10
L +FQ IHQ
Sbjct: 292 LYFFQAIHQ 300


>sp|GATC_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit C|Sulfurisphaera tokodaii (strain DSM

Query: 1 LLDYFQQIHQ 10
+LD+F QI++
Sbjct: 36 ILDFFDQINK 45


>sp|G3P_METB6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoregula boonei (strain DSM 21154

Query: 2 LDYFQQIHQ 10
L +FQ IHQ
Sbjct: 293 LCFFQAIHQ 301


>sp|G3P_METHJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LDYFQQIHQ 10
L +FQ IHQ
Sbjct: 293 LFFFQAIHQ 301


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 LLDYFQQIHQ 10
LLD FQ I++
Sbjct: 105 LLDIFQNIYE 114


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 YFQQIHQ 10
+FQ IHQ
Sbjct: 294 FFQAIHQ 300


>sp|G3P1_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 YFQQIHQ 10
+FQ IHQ
Sbjct: 294 FFQAIHQ 300


>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 1 LLDYFQQIHQ 10
L+D +QIH+
Sbjct: 195 LIDEMEQIHE 204


>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 LDYFQQIHQ 10
L +FQ +HQ
Sbjct: 292 LYFFQAVHQ 300


>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LLDYFQQIHQ 10
L+DY + IHQ
Sbjct: 112 LIDYQEIIHQ 121


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DYFQQIH 9
+Y++QIH
Sbjct: 581 EYYKQIH 587


>sp|GATC_METAR|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Methanocella arvoryzae (strain DSM

Query: 1 LLDYFQQIHQ 10
+LDYF+++ +
Sbjct: 33 ILDYFRELDE 42


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 LLDYFQQIHQ 10
LLD+ +++H+
Sbjct: 299 LLDFAEELHE 308


>sp|SYR_HALSA|ARGININE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LLDYFQQIHQ 10
LLD +QQ Q
Sbjct: 200 LLDLYQQFEQ 209


>sp|ENO_SULAC|ENOLASE acidocaldarius (strain ATCC 33909

Query: 1 LLDYFQQI 8
L+DY++Q+
Sbjct: 263 LIDYYKQL 270


>sp|GATC_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Methanococcoides burtonii (strain DSM

Query: 1 LLDYFQQIHQ 10
+LDYF Q+ +
Sbjct: 33 VLDYFGQLDE 42


>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 3 DYFQQIH 9
D+F+Q+H
Sbjct: 290 DFFKQLH 296


>sp|MSRA_METAC|PEPTIDE methionine sulfoxide reductase MsrA|Methanosarcina acetivorans

Query: 1 LLDYFQQIH 9
LLD F +IH
Sbjct: 96 LLDVFWKIH 104


>sp|Y600_ARCFU|UNCHARACTERIZED protein AF_0600|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LDYFQQIHQ 10
LD FQ+IH+
Sbjct: 70 LDEFQRIHK 78


>sp|MSRA_METMA|PEPTIDE methionine sulfoxide reductase MsrA|Methanosarcina mazei (strain

Query: 1 LLDYFQQIH 9
LLD F +IH
Sbjct: 119 LLDVFWKIH 127


>sp|NADM2_SULAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LLDYFQQIH 9
+LDY +IH
Sbjct: 152 VLDYLLEIH 160


>sp|PYRB_HALMA|ASPARTATE carbamoyltransferase catalytic subunit|Haloarcula marismortui

Query: 4 YFQQIH 9
YFQQ H
Sbjct: 281 YFQQAH 286




82|SequenceR|415|406|EMSGTLLDYF

>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 1 EMSGTLLDYF 10
E TLLDYF
Sbjct: 318 EKPNTLLDYF 327


>sp|PSA_METPE|PROTEASOME subunit alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 SGTLLDY 9
SGTLL+Y
Sbjct: 155 SGTLLEY 161


>sp|PSA_METMJ|PROTEASOME subunit alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 SGTLLDY 9
SGTLL+Y
Sbjct: 155 SGTLLEY 161


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 5 TLLDYF 10
TLLDYF
Sbjct: 337 TLLDYF 342


>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EMSGTLLDYF 10
+ SGTLL Y+
Sbjct: 260 DRSGTLLSYW 269


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 5 TLLDYF 10
TLLDYF
Sbjct: 336 TLLDYF 341


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 5 TLLDYF 10
TLLDYF
Sbjct: 337 TLLDYF 342


>sp|ENDA_METBF|TRNA-SPLICING endonuclease|Methanosarcina barkeri (strain Fusaro /

Query: 1 EMSGTLLDY 9
E+ GT+LD+
Sbjct: 53 ELEGTMLDF 61


>sp|PSA_METB6|PROTEASOME subunit alpha|Methanoregula boonei (strain DSM 21154

Query: 3 SGTLLDY 9
SGTLL+Y
Sbjct: 155 SGTLLEY 161


>sp|GATC_METTP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Methanothrix thermoacetophila (strain

Query: 5 TLLDYF 10
T+LDYF
Sbjct: 32 TILDYF 37


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 4 GTLLDY 9
GTL+DY
Sbjct: 147 GTLIDY 152




83|SequenceR|420|411|WGRIIEMSGT

>sp|TRPF_META3|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 WGRIIEMSGT 10
W +IIE +GT
Sbjct: 64 WAKIIEKTGT 73


>sp|TRPF_METVS|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus vannielii (strain ATCC 35089

Query: 1 WGRIIEMSGT 10
W IIE++GT
Sbjct: 64 WKNIIELTGT 73


>sp|TRPF_METM6|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C6 /

Query: 1 WGRIIEMSGT 10
W IIE++GT
Sbjct: 64 WENIIELTGT 73


>sp|TRPF_METM5|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C5 /

Query: 1 WGRIIEMSGT 10
W IIE++GT
Sbjct: 64 WENIIELTGT 73


>sp|TRPF_METMP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 WGRIIEMSGT 10
W IIE +GT
Sbjct: 64 WENIIEFTGT 73


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WGRIIEMSG 9
WG +++M G
Sbjct: 304 WGEVVKMKG 312


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 1 WGRIIEM 7
W R+IEM
Sbjct: 330 WARLIEM 336


>sp|PYRH_METTH|URIDYLATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GRIIEMSGT 10
GRI+ M GT
Sbjct: 105 GRIVVMGGT 113


>sp|MTIP_METJA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanocaldococcus jannaschii

Query: 1 WGRIIEMSG 9
WG ++ M+G
Sbjct: 167 WGDVVGMTG 175


>sp|QUEC_PYRAE|7-CYANO-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WGRIIE 6
WGR++E
Sbjct: 67 WGRVVE 72


>sp|SUI1_THEVO|PROTEIN translation factor SUI1 homolog|Thermoplasma volcanium (strain

Query: 2 GRIIEMSG 9
GRIIE+ G
Sbjct: 72 GRIIELQG 79


>sp|RNH2_CENSY|RIBONUCLEASE HII|Cenarchaeum symbiosum (strain A)

Query: 2 GRIIEMSG 9
GR+ EMSG
Sbjct: 116 GRVSEMSG 123


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 RIIEMSGT 10
RIIE+ GT
Sbjct: 688 RIIEIEGT 695


>sp|RNP3_HALMA|RIBONUCLEASE P protein component 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 WGRIIE 6
WG+I+E
Sbjct: 205 WGQIVE 210


>sp|PYRH_METS3|URIDYLATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GRIIEMSGT 10
G+II M GT
Sbjct: 105 GKIIVMGGT 113


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 RIIEMSGT 10
RIIE+ GT
Sbjct: 688 RIIEIEGT 695


>sp|TAW21_SACS2|TRNA 4-demethylwyosine(37)-methyltransferase Taw21|Saccharolobus

Query: 1 WGRIIEMSGT 10
WGR +++GT
Sbjct: 56 WGRHRDVNGT 65


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 RIIEMSGT 10
RIIE+ GT
Sbjct: 688 RIIEIEGT 695


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GRIIEMSG 9
G +IEMSG
Sbjct: 663 GELIEMSG 670


>sp|RTCA_THESM|RNA 3'-terminal phosphate cyclase|Thermococcus sibiricus (strain DSM

Query: 1 WGRIIEMSG 9
+GR+ EM G
Sbjct: 326 FGRVFEMEG 334


>sp|HYD2A_PYRFU|SULFHYDROGENASE 2 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WGRIIE 6
WG IIE
Sbjct: 96 WGEIIE 101




84|SequenceR|425|416|PIKEAWGRII

>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 3 KEAWGRI 9
KEAWGR+
Sbjct: 455 KEAWGRL 461


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 3 KEAWGRI 9
KEAWGR+
Sbjct: 455 KEAWGRL 461


>sp|LYSX_SULAC|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PIKEAWGRII 10
PI+ +WGR++
Sbjct: 123 PIEGSWGRMV 132


>sp|LYSX_SACS2|ALPHA-AMINOADIPATE--LYSW ligase LysX|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PIKEAWGRII 10
P++ +WGR++
Sbjct: 122 PVEGSWGRMV 131


>sp|LYSX_SULTO|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PIKEAWGRII 10
P++ +WGR++
Sbjct: 132 PVEGSWGRMV 141


>sp|EF1B_METAR|ELONGATION factor 1-beta|Methanocella arvoryzae (strain DSM 22066

Query: 1 PIKEAWGRI 9
P++EAW ++
Sbjct: 66 PVEEAWSKV 74


>sp|Y920_METJA|UNCHARACTERIZED protein MJ0920|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PIKEAWGRI 9
PIK WG++
Sbjct: 43 PIKRYWGKL 51


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 EAWGRI 9
EAWGRI
Sbjct: 585 EAWGRI 590


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PIKEAWGRI 9
PI E W RI
Sbjct: 198 PISEVWKRI 206


>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 6 WGRII 10
WGRII
Sbjct: 292 WGRII 296


>sp|FEN_ARCFU|FLAP endonuclease 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIKEAWGRI 9
P+K++ GRI
Sbjct: 46 PLKDSQGRI 54


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 PIKEAW 6
PIKE W
Sbjct: 693 PIKEYW 698


>sp|KUP_METHJ|PROBABLE potassium transport system protein|Methanospirillum hungatei JF-1

Query: 1 PIKEAWG 7
PI+ AWG
Sbjct: 248 PIQYAWG 254


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 PIKEAW 6
PIKE W
Sbjct: 693 PIKEYW 698


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 PIKEAW 6
PIKE W
Sbjct: 693 PIKEYW 698


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 PIKEAWGRII 10
PIK+ +GR I
Sbjct: 144 PIKQKYGRKI 153


>sp|CSM3_METJA|CRISPR system Cms endoribonuclease Csm3|Methanocaldococcus jannaschii

Query: 2 IKEAWGRII 10
I++A+GRI+
Sbjct: 41 IRDAFGRIL 49


>sp|TRM56_IGNH4|TRNA (cytidine(56)-2'-O)-methyltransferase|Ignicoccus hospitalis

Query: 2 IKEAWGRII 10
++E WGR++
Sbjct: 50 VEERWGRLL 58


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 1 PIKEAW 6
P+KE W
Sbjct: 66 PVKEVW 71


>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 1 PIKEAWGR 8
PIK+ +GR
Sbjct: 125 PIKQKYGR 132


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 1 PIKEAWGR 8
PIK+ +GR
Sbjct: 125 PIKQKYGR 132


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 1 PIKEAWGRII 10
PIK+ +GR I
Sbjct: 139 PIKKKYGRKI 148




85|SequenceR|430|421|LDAFGPIKEA

>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 1 LDAFGPIKEA 10
LDAF P+++A
Sbjct: 322 LDAFDPLRDA 331


>sp|HPPA2_METAC|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina acetivorans

Query: 1 LDAFGPIKE 9
LD++GPI +
Sbjct: 413 LDSYGPITD 421


>sp|HPPA2_METMA|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina mazei (strain

Query: 1 LDAFGPIKE 9
LD++GPI +
Sbjct: 413 LDSYGPITD 421


>sp|MTRE_METBU|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcoides burtonii (strain DSM

Query: 3 AFGPIKE 9
AFGP KE
Sbjct: 289 AFGPYKE 295


>sp|TAL_METVS|PROBABLE transaldolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LDAFGPIKEA 10
LDA G IKEA
Sbjct: 61 LDAEGMIKEA 70


>sp|GAD_PICTO|D-GLUCONATE/D-GALACTONATE dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 2 DAFGPIKEA 10
+AFGP++ A
Sbjct: 301 NAFGPVQTA 309


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 1 LDAFGPIKE 9
DAF P+KE
Sbjct: 637 FDAFEPMKE 645


>sp|RTCA_METS5|RNA 3'-terminal phosphate cyclase|Metallosphaera sedula (strain ATCC

Query: 1 LDAFGPIKE 9
LD+FG ++E
Sbjct: 176 LDSFGELRE 184


>sp|PRIS_METLZ|DNA primase small subunit PriS|Methanocorpusculum labreanum (strain

Query: 1 LDAFGPIKEA 10
LDAF P+ +A
Sbjct: 317 LDAFDPLIDA 326


>sp|MTRE_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina acetivorans (strain

Query: 2 DAFGPIKE 9
+A+GP KE
Sbjct: 289 NAYGPYKE 296


>sp|TAL_METM5|PROBABLE transaldolase|Methanococcus maripaludis (strain C5 /

Query: 1 LDAFGPIKEA 10
LDA G +KEA
Sbjct: 61 LDAEGMVKEA 70


>sp|LADH_METVS|LACTALDEHYDE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LDAFGPI 7
++AFGPI
Sbjct: 366 VEAFGPI 372


>sp|Y3368_HALWD|UPF0173 metal-dependent hydrolase HQ_3368A|Haloquadratum walsbyi (strain

Query: 2 DAFGPIK 8
D FGPI+
Sbjct: 201 DTFGPIE 207


>sp|TAL_METM7|PROBABLE transaldolase|Methanococcus maripaludis (strain C7 /

Query: 1 LDAFGPIKEA 10
LDA G +KEA
Sbjct: 61 LDAEGMVKEA 70


>sp|PRIS_METTP|DNA primase small subunit PriS|Methanothrix thermoacetophila (strain

Query: 1 LDAFGPIKEA 10
L AF P+K+A
Sbjct: 335 LHAFDPLKDA 344


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 4 FGPIKE 9
FGPIK+
Sbjct: 72 FGPIKD 77


>sp|PRIS_NATPD|DNA primase small subunit PriS|Natronomonas pharaonis (strain ATCC

Query: 1 LDAFGPIKEA 10
+DAF P+ +A
Sbjct: 329 IDAFDPLSDA 338


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 LDAFGPIKE 9
LDAFG I++
Sbjct: 471 LDAFGEIEK 479


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 1 LDAFGPIKE 9
+DA+GP+ +
Sbjct: 425 VDAYGPVAD 433


>sp|HPPA1_METAC|PUTATIVE K(+)-stimulated pyrophosphate-energized sodium pump|Methanosarcina

Query: 1 LDAFGPIKE 9
+DA+GP+ +
Sbjct: 425 VDAYGPVAD 433


>sp|PRIS_ARCFU|DNA primase small subunit PriS|Archaeoglobus fulgidus (strain ATCC

Query: 1 LDAFGPIKEA 10
+++F P+K+A
Sbjct: 274 IESFNPLKDA 283


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DAFGPIKEA 10
DAFG KEA
Sbjct: 181 DAFGVDKEA 189




86|SequenceR|435|426|QDAKPLDAFG

>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 DAKPLDA 8
DAKPL+A
Sbjct: 145 DAKPLEA 151


>sp|PDXT_CALMQ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Caldivirga maquilingensis

Query: 3 AKPLDAFG 10
AKPL A+G
Sbjct: 155 AKPLVAYG 162


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 3 AKPLDAFG 10
AKPLD+ G
Sbjct: 563 AKPLDSAG 570


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 AKPLDAF 9
+KPLDA+
Sbjct: 782 SKPLDAY 788


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DAKPLDAF 9
D K LDAF
Sbjct: 171 DVKELDAF 178




87|SequenceR|440|431|EFLLDQDAKP

>sp|RELB4_METJA|PUTATIVE antitoxin RelB4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EFLLDQDAKP 10
EFLL+ + KP
Sbjct: 44 EFLLEDELKP 53




88|SequenceR|445|436|ELFASEFLLD

>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 1 ELFASEFLLD 10
++FAS+F +D
Sbjct: 237 DIFASQFQMD 246




89|SequenceR|450|441|RLVFLELFAS

***** No hits found ******


90|SequenceR|455|446|SRYALRLVFL

>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 1 SRYALRLVF 9
+RYALR+ F
Sbjct: 221 ARYALRVEF 229




91|SequenceR|460|451|GEVPNSRYAL

>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GEVPNSRYAL 10
G VP ++YAL
Sbjct: 167 GGVPGNKYAL 176


>sp|PORA_METBF|PYRUVATE synthase subunit PorA|Methanosarcina barkeri (strain Fusaro /

Query: 1 GEVPNSRY 8
GE+PN Y
Sbjct: 53 GEIPNCEY 60


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GEVPNSRYAL 10
G VP ++YAL
Sbjct: 168 GGVPGNKYAL 177


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 1 GEVPNSRYAL 10
G VP ++YAL
Sbjct: 169 GGVPGNKYAL 178


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GEVPNSRYAL 10
G VP ++YAL
Sbjct: 169 GGVPGNKYAL 178


>sp|AMPPA_METM7|AMP phosphorylase|Methanococcus maripaludis (strain C7 /

Query: 1 GEVPNSRYAL 10
G VP ++YAL
Sbjct: 169 GGVPGNKYAL 178


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 1 GEVPNSRYAL 10
G VP ++YAL
Sbjct: 169 GGVPGNKYAL 178


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 3 VPNSRYAL 10
+PN++YAL
Sbjct: 288 MPNTKYAL 295


>sp|UPP_AERPE|URACIL phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GEVPNSRYAL 10
GE P +RY L
Sbjct: 10 GETPLARYVL 19


>sp|AMPPA_METVS|AMP phosphorylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GEVPNSRYAL 10
G VP ++YAL
Sbjct: 169 GGVPGNKYAL 178


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 1 GEVPNSRYA 9
GEVP S +A
Sbjct: 552 GEVPKSHHA 560


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 EVPNSR 7
EVPNSR
Sbjct: 473 EVPNSR 478


>sp|RRP42_METAR|EXOSOME complex component Rrp42|Methanocella arvoryzae (strain DSM 22066

Query: 2 EVPNSRYAL 10
++PNS++ L
Sbjct: 164 KIPNSKFGL 172


>sp|PDXT_PYRCJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum calidifontis

Query: 1 GEVPNSRYAL 10
G+V RYAL
Sbjct: 10 GDVEEHRYAL 19




92|SequenceR|465|456|CFILKGEVPN

>sp|Y292_METBF|UPF0179 protein Mbar_A0292|Methanosarcina barkeri (strain Fusaro /

Query: 2 FILKGEVPN 10
FI KGE+P
Sbjct: 22 FIFKGEMPE 30


>sp|Y589_METMA|UPF0179 protein MM_0589|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FILKGEVP 9
FI KGE+P
Sbjct: 22 FIFKGEMP 29


>sp|Y3685_METAC|UPF0179 protein MA_3685|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FILKGEVP 9
FI KGE+P
Sbjct: 22 FIFKGEMP 29


>sp|HCGF_METLZ|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanocorpusculum labreanum

Query: 2 FILKGEVPN 10
F+L+GE P+
Sbjct: 158 FLLEGEFPD 166


>sp|HPRT_METVS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 2 FILKGEVP 9
++L+GEVP
Sbjct: 87 YLLEGEVP 94


>sp|RL6_PICTO|LARGE ribosomal subunit protein uL6|Picrophilus torridus (strain ATCC

Query: 2 FILKGEV 8
F+LKGEV
Sbjct: 172 FLLKGEV 178


>sp|HPRT_METM7|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 FILKGEVP 9
++L+GE+P
Sbjct: 87 YLLEGEIP 94


>sp|HPRT_METM5|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 FILKGEVP 9
++L+GE+P
Sbjct: 87 YLLEGEIP 94


>sp|GYAR_THEPD|GLYOXYLATE reductase|Thermofilum pendens (strain DSM 2475

Query: 3 ILKGEVP 9
+LKGE+P
Sbjct: 312 VLKGEMP 318


>sp|HPRT_METM6|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 FILKGEVP 9
++L+GE+P
Sbjct: 87 YLLEGEIP 94


>sp|HPRT_METOI|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermococcus okinawensis (strain

Query: 2 FILKGEVP 9
++L+GE+P
Sbjct: 86 YLLEGEIP 93


>sp|TRPD_SACS2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 3 ILKGEVP 9
I++GEVP
Sbjct: 28 IIRGEVP 34


>sp|TRPD_SACI7|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 ILKGEVP 9
I++GEVP
Sbjct: 28 IIRGEVP 34


>sp|TRPD_SACI6|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4

Query: 3 ILKGEVP 9
I++GEVP
Sbjct: 28 IIRGEVP 34


>sp|TRPD_SACI4|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 ILKGEVP 9
I++GEVP
Sbjct: 28 IIRGEVP 34


>sp|TRPD_SACI3|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 ILKGEVP 9
I++GEVP
Sbjct: 28 IIRGEVP 34


>sp|TRPD_SACI2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 ILKGEVP 9
I++GEVP
Sbjct: 28 IIRGEVP 34


>sp|TRPD_SACI1|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 ILKGEVP 9
I++GEVP
Sbjct: 28 IIRGEVP 34


>sp|CDC6_PYRHO|ORC1-TYPE DNA replication protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 ILKGEVPN 10
+LKGE P+
Sbjct: 55 VLKGETPS 62


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 3 ILKGEVPN 10
+LKGE P+
Sbjct: 55 VLKGETPS 62


>sp|HPRT_METMP|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 FILKGEVP 9
++L+GE+P
Sbjct: 87 YLLEGEIP 94


>sp|FTRL_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Archaeoglobus fulgidus (strain ATCC

Query: 1 CFILKGEVPN 10
C LKG++P+
Sbjct: 225 CPTLKGKIPD 234


>sp|PYRH_THEPD|URIDYLATE kinase|Thermofilum pendens (strain DSM 2475

Query: 2 FILKGEVP 9
F+LKG+ P
Sbjct: 206 FVLKGDPP 213


>sp|HPRT_METV3|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus voltae (strain ATCC

Query: 2 FILKGEVP 9
+ L+GEVP
Sbjct: 87 YFLEGEVP 94


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 CFILKGEVPN 10
CFI + +VP+
Sbjct: 221 CFIREDDVPH 230


>sp|LIPA_SACS2|LIPOYL synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 CFILKGE 7
C++LKG+
Sbjct: 64 CYVLKGK 70


>sp|CISY_HALVD|CITRATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 2 FILKGEVPN 10
++L GE PN
Sbjct: 165 YMLNGEEPN 173


>sp|IF2A_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 ILKGEVPN 10
+LKG VP+
Sbjct: 150 VLKGHVPD 157


>sp|IF2A_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 ILKGEVPN 10
+LKG VP+
Sbjct: 150 VLKGHVPD 157


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 ILKGEVP 9
+LKGE+P
Sbjct: 519 LLKGELP 525


>sp|HPRT_METIK|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanotorris igneus (strain DSM 5666

Query: 2 FILKGEVP 9
+ LKGE+P
Sbjct: 86 YKLKGEIP 93


>sp|TRPD_SULAC|ANTHRANILATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 3 ILKGEVP 9
++KGE+P
Sbjct: 23 LMKGEIP 29


>sp|Y1057_METJA|UNCHARACTERIZED glycosyltransferase MJ1057|Methanocaldococcus jannaschii (strain

Query: 2 FILKGEVPN 10
F+LK +PN
Sbjct: 207 FLLKYRIPN 215


>sp|RFHPS_ARCFU|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FILKGEVPN 10
F+LKGE N
Sbjct: 47 FVLKGEPIN 55


>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FILKGEVPN 10
+ILKG++ N
Sbjct: 342 YILKGDLKN 350


>sp|RBL_METJA|RIBULOSE bisphosphate carboxylase|Methanocaldococcus jannaschii (strain

Query: 1 CFILKGE 7
C ++KGE
Sbjct: 18 CMVIKGE 24




93|SequenceR|470|461|LVVGNCFILK

>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LVVGNCFI 8
L+V NCFI
Sbjct: 342 LIVKNCFI 349


>sp|GGR_METBF|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LVVGNCFI 8
L+V NCFI
Sbjct: 342 LIVKNCFI 349


>sp|GGR_METAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LVVGNCFI 8
L+V NCFI
Sbjct: 342 LIVKNCFI 349


>sp|SYR_METVS|ARGININE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 GNCFILK 10
GNC ILK
Sbjct: 527 GNCRILK 533


>sp|PGK_NATPD|PHOSPHOGLYCERATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VVGNCFIL 9
+VGN F+L
Sbjct: 225 IVGNAFLL 232


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 2 VVGNCFILK 10
V+GN I+K
Sbjct: 190 VIGNAIIIK 198




94|SequenceR|475|466|CQLRHLVVGN

>sp|RS7_SULTO|SMALL ribosomal subunit protein uS7|Sulfurisphaera tokodaii (strain DSM

Query: 3 LRHLVVG 9
LRHLV+G
Sbjct: 141 LRHLVMG 147


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 4 RHLVVGN 10
R+LV+GN
Sbjct: 149 RYLVIGN 155


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 4 RHLVVGN 10
R+LV+GN
Sbjct: 149 RYLVIGN 155




95|SequenceR|480|471|GFGRVCQLRH

>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GFGRVCQL 8
G+G+VC L
Sbjct: 48 GYGKVCSL 55


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GRVCQLRH 10
GRVC++ H
Sbjct: 494 GRVCKILH 501


>sp|ENO_METLZ|ENOLASE labreanum (strain ATCC 43576

Query: 1 GFGRVC 6
GFGR C
Sbjct: 31 GFGRAC 36


>sp|Y062_PYRAR|MEMO1 family protein Pars_0062|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GFGRVCQLRH 10
GFG V L+H
Sbjct: 249 GFGNVTLLKH 258


>sp|RL10E_HALSA|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain

Query: 6 CQLRH 10
CQLRH
Sbjct: 58 CQLRH 62


>sp|RL10E_HALS3|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain

Query: 6 CQLRH 10
CQLRH
Sbjct: 58 CQLRH 62


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 FGRVCQLRH 10
F R C L H
Sbjct: 167 FARYCNLSH 175


>sp|SYH_ARCFU|HISTIDINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GFGRVCQ 7
GF RVC+
Sbjct: 305 GFDRVCE 311


>sp|RL37_DESA1|LARGE ribosomal subunit protein eL37|Desulfurococcus amylolyticus

Query: 1 GFGRVCQLRH 10
GFGR ++RH
Sbjct: 39 GFGRSKRIRH 48


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 2 FGRVCQL 8
FG++C++
Sbjct: 604 FGKICEI 610




96|SequenceR|485|476|SDIWEGFGRV

>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DIWEGFGRV 10
D++EG GRV
Sbjct: 159 DVFEGVGRV 167


>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 2 DIWEGFGR 9
D+WE F R
Sbjct: 330 DVWEKFSR 337


>sp|GLNA_THEKO|GLUTAMINE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 WEGFGRV 10
WEG GRV
Sbjct: 82 WEGIGRV 88


>sp|SUI1_THEVO|PROTEIN translation factor SUI1 homolog|Thermoplasma volcanium (strain

Query: 4 WEGFGR 9
WEGFGR
Sbjct: 16 WEGFGR 21


>sp|HOSA_SULTO|HOMOCITRATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SDIWEGFGRV 10
SDI+EG R+
Sbjct: 50 SDIYEGIKRI 59


>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 4 WEGFGR 9
W GFGR
Sbjct: 29 WNGFGR 34


>sp|ENO_METTH|ENOLASE thermautotrophicus (strain ATCC 29096

Query: 4 WEGFGR 9
W GFGR
Sbjct: 29 WNGFGR 34


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SDIWEGFGRV 10
+D++EG G+V
Sbjct: 158 TDVFEGVGKV 167


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 3 IWEGFGRV 10
I EGFGRV
Sbjct: 209 IAEGFGRV 216


>sp|MALK_THELN|TREHALOSE/MALTOSE import ATP-binding protein MalK|Thermococcus litoralis (strain

Query: 2 DIWEGFGRV 10
D+W+ FG V
Sbjct: 8 DVWKVFGEV 16


>sp|ARLY_SULTO|ARGININOSUCCINATE lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 WEGFGR 9
W GFGR
Sbjct: 91 WVGFGR 96


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 2 DIWEGFGRV 10
D++EG G+V
Sbjct: 162 DVFEGVGKV 170


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 2 DIWEGF 7
D WEGF
Sbjct: 65 DQWEGF 70


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain

Query: 2 DIWEGF 7
D WEGF
Sbjct: 65 DQWEGF 70


>sp|PXPA_THESM|5-OXOPROLINASE subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 1 SDIWEGFGR 9
SD+ E FGR
Sbjct: 7 SDLGESFGR 15


>sp|PXPA_PYRAB|5-OXOPROLINASE subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 SDIWEGFGR 9
SD+ E FGR
Sbjct: 7 SDLGESFGR 15


>sp|PXPA_PYRHO|5-OXOPROLINASE subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SDIWEGFGR 9
SD+ E FGR
Sbjct: 7 SDLGESFGR 15


>sp|PXPA_THEON|5-OXOPROLINASE subunit A|Thermococcus onnurineus (strain NA1)

Query: 1 SDIWEGFGR 9
SD+ E FGR
Sbjct: 7 SDLGESFGR 15


>sp|PXPA_PYRFU|5-OXOPROLINASE subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SDIWEGFGR 9
SD+ E FGR
Sbjct: 7 SDLGESFGR 15


>sp|PYRC_THEKO|DIHYDROOROTASE kodakarensis (strain ATCC BAA-918

Query: 3 IWEGFGRV 10
+WE F R+
Sbjct: 263 LWENFSRI 270


>sp|MCE_PYRHO|METHYLMALONYL-COA epimerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IWEGFG 8
IWEG G
Sbjct: 24 IWEGLG 29


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 2 DIWEGFGRV 10
DIWE G++
Sbjct: 37 DIWEHEGKI 45


>sp|THRC_METJA|THREONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SDIWEGF 7
S IW+GF
Sbjct: 239 SAIWKGF 245


>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 DIWEGFGRV 10
D+WE G+V
Sbjct: 37 DVWEENGKV 45


>sp|HIS1_SACS2|ATP phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 SDIWE 5
SDIWE
Sbjct: 251 SDIWE 255


>sp|Y065_METJA|UNCHARACTERIZED protein MJ0065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DIWEGFGRV 10
++WE GRV
Sbjct: 151 EVWEKEGRV 159


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DIWEGFG 8
D WEGF
Sbjct: 291 DDWEGFA 297


>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DIWEGFGRV 10
D+WE G+V
Sbjct: 37 DVWEENGKV 45


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 SDIWEGF 7
+ +WEGF
Sbjct: 132 AKVWEGF 138


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SDIWEGF 7
+ +WEGF
Sbjct: 132 AKVWEGF 138


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 SDIWEGF 7
+ +WEGF
Sbjct: 132 AKVWEGF 138


>sp|ARLY_METPE|ARGININOSUCCINATE lyase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 IWEGFG 8
+WEG G
Sbjct: 330 LWEGIG 335


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 4 WEGFGR 9
WE FGR
Sbjct: 182 WEFFGR 187


>sp|SUI1_PICTO|PROTEIN translation factor SUI1 homolog|Picrophilus torridus (strain ATCC

Query: 4 WEGFGR 9
WEGF R
Sbjct: 16 WEGFDR 21


>sp|IF5A_PYRAB|TRANSLATION initiation factor 5A|Pyrococcus abyssi (strain GE5 /

Query: 4 WEGFGRV 10
WE GRV
Sbjct: 122 WETLGRV 128


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DIWEGFGRV 10
D+WE G++
Sbjct: 37 DVWEEDGKI 45




97|SequenceR|490|481|SFEVISDIWE

>sp|CAPPA_SACI1|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 SFEVISDIWE 10
SFE+I DIW+
Sbjct: 434 SFELIKDIWK 443


>sp|CAPPA_SACI7|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 SFEVISDIWE 10
SFE+I DIW+
Sbjct: 434 SFELIKDIWK 443


>sp|CAPPA_SACI6|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SFEVISDIWE 10
SFE+I DIW+
Sbjct: 434 SFELIKDIWK 443


>sp|CAPPA_SACI4|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SFEVISDIWE 10
SFE+I DIW+
Sbjct: 434 SFELIKDIWK 443


>sp|CAPPA_SACI3|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 SFEVISDIWE 10
SFE+I DIW+
Sbjct: 434 SFELIKDIWK 443


>sp|CAPPA_SACI2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 SFEVISDIWE 10
SFE+I DIW+
Sbjct: 434 SFELIKDIWK 443


>sp|CAPPA_SACS2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SFEVISDIWE 10
SF++I DIW+
Sbjct: 434 SFKLIKDIWK 443


>sp|NTPTH_KORCO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Korarchaeum cryptofilum (strain OPF8)

Query: 2 FEVISDIWE 10
EV+ DIWE
Sbjct: 120 LEVVRDIWE 128


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 FEVISDIWE 10
FE+ D+WE
Sbjct: 260 FEITEDLWE 268


>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EVISDIWE 10
+V+SD WE
Sbjct: 91 QVVSDFWE 98


>sp|RPO10_METAR|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocella arvoryzae (strain DSM

Query: 3 EVISDIWE 10
+VIS++WE
Sbjct: 11 KVISEVWE 18


>sp|VAPC3_PYRAE|RIBONUCLEASE VapC3|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SFEVISDIWE 10
++EV +D+W+
Sbjct: 40 AYEVANDLWK 49


>sp|RPO10_METLZ|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocorpusculum labreanum (strain

Query: 3 EVISDIWE 10
+VIS +WE
Sbjct: 11 KVISTVWE 18


>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SFEVISDIW 9
S E++SD W
Sbjct: 347 SVEIVSDNW 355


>sp|Y1246_PYRAB|UNCHARACTERIZED protein PYRAB12460|Pyrococcus abyssi (strain GE5 /

Query: 1 SFEVISDIW 9
S E++ D+W
Sbjct: 67 SLEMLRDVW 75


>sp|AROD_THEON|3-DEHYDROQUINATE dehydratase|Thermococcus onnurineus (strain NA1)

Query: 1 SFEVISDIWE 10
+FE D WE
Sbjct: 113 NFEETPDFWE 122




98|SequenceR|495|486|NQLNSSFEVI

>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NQLNSSFEV 9
N LNS FE+
Sbjct: 1266 NALNSVFEI 1274


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 QLNSSFEVI 10
+L+SSFEV+
Sbjct: 101 ELSSSFEVL 109


>sp|RLME_META3|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus aeolicus

Query: 2 QLNSSFEVI 10
QLN FE+I
Sbjct: 36 QLNEKFEII 44




99|SequenceR|500|491|IDINMNQLNS

>sp|FOLD_METB6|BIFUNCTIONAL protein FolD|Methanoregula boonei (strain DSM 21154

Query: 1 IDINMNQLN 9
ID+ +NQLN
Sbjct: 223 IDVGINQLN 231


>sp|TRUA_METTH|TRNA pseudouridine synthase A|Methanothermobacter thermautotrophicus

Query: 2 DINMNQLN 9
DI++NQ+N
Sbjct: 73 DIHVNQIN 80


>sp|CRYD_NATPD|CRYPTOCHROME DASH|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IDINMNQLN 9
+D NM +LN
Sbjct: 336 VDANMRELN 344


>sp|TRUA_METST|TRNA pseudouridine synthase A|Methanosphaera stadtmanae (strain ATCC

Query: 2 DINMNQLN 9
DI++NQLN
Sbjct: 73 DIHINQLN 80


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IDINMNQL 8
+DI MN+L
Sbjct: 849 VDIKMNEL 856




100|SequenceR|505|496|CSFASIDINM

>sp|APGM_METMP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 CSFASIDIN 9
C+F+S+D N
Sbjct: 94 CNFSSVDEN 102


>sp|APGM_METM7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C7 /

Query: 1 CSFASIDIN 9
C+F+S+D N
Sbjct: 94 CNFSSVDEN 102


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 2 SFASIDINM 10
SFAS DIN+
Sbjct: 289 SFASDDINV 297


>sp|EF1A_METST|ELONGATION factor 1-alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CSFASIDINM 10
C+F S+D+ +
Sbjct: 338 CTFLSLDVKL 347


>sp|ACDD_METKA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanopyrus kandleri

Query: 2 SFASIDINM 10
+FA +D+N+
Sbjct: 256 TFAPVDVNL 264


>sp|APGM_METVS|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 CSFASID 7
C+F+S+D
Sbjct: 94 CNFSSVD 100




101|SequenceR|510|501|ALAAICSFAS

>sp|CIMA_ARCFU|PUTATIVE (R)-citramalate synthase CimA|Archaeoglobus fulgidus (strain ATCC

Query: 3 AAICSFA 9
A ICSFA
Sbjct: 66 AEICSFA 72


>sp|CIMA_METTH|PUTATIVE (R)-citramalate synthase CimA|Methanothermobacter

Query: 3 AAICSFA 9
A ICSFA
Sbjct: 66 AEICSFA 72




102|SequenceR|515|506|RETVMALAAI

***** No hits found ******


103|SequenceR|520|511|EKLGHRETVM

>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 1 EKLGHRETVM 10
EKL HRE V+
Sbjct: 200 EKLEHREPVL 209


>sp|UPPP_METTH|UNDECAPRENYL-DIPHOSPHATASE thermautotrophicus (strain ATCC 29096

Query: 1 EKLGHRETVM 10
EKLG RE+++
Sbjct: 58 EKLGVRESLI 67


>sp|MSRA_PICTO|PEPTIDE methionine sulfoxide reductase MsrA|Picrophilus torridus (strain

Query: 1 EKLGHRETV 9
++ GH ETV
Sbjct: 48 QRTGHAETV 56


>sp|COFD_METBU|2-PHOSPHO-L-LACTATE transferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EKLGHRETVM 10
++LGH E++M
Sbjct: 78 KELGHDESMM 87


>sp|PUS10_CALMQ|TRNA pseudouridine synthase Pus10|Caldivirga maquilingensis (strain

Query: 2 KLGHRETVM 10
K GHRE+++
Sbjct: 67 KSGHRESLL 75


>sp|CDC61_ARCFU|ORC1-TYPE DNA replication protein 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 EKLGHRE 7
EKL HRE
Sbjct: 27 EKLPHRE 33


>sp|PYRI_HALMA|ASPARTATE carbamoyltransferase regulatory chain|Haloarcula marismortui

Query: 1 EKLGHRETV 9
++LGH++ V
Sbjct: 53 DRLGHKDVV 61


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 KLGHRETV 9
K+GHR+ +
Sbjct: 352 KVGHRDVI 359




104|SequenceR|525|516|EVRKPEKLGH

>sp|PURK_SACS2|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 EVRKPEKLGH 10
EVRK K+GH
Sbjct: 327 EVRKRRKMGH 336


>sp|SYY_METMJ|TYROSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VRKPEKLG 9
+R+PEK G
Sbjct: 261 IRRPEKFG 268


>sp|SYY_METTH|TYROSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VRKPEKLG 9
+R+PEK G
Sbjct: 266 IRRPEKFG 273


>sp|SYY_METLZ|TYROSINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 VRKPEKLG 9
+R+PEK G
Sbjct: 261 IRRPEKFG 268


>sp|PDXT_IGNH4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Ignicoccus hospitalis (strain

Query: 1 EVRKPEKL 8
EVRKPE L
Sbjct: 34 EVRKPEHL 41


>sp|GGGPS_PYRIL|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 KPEKLG 9
KPEKLG
Sbjct: 225 KPEKLG 230


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VRKPEKL 8
+R+PEKL
Sbjct: 119 IREPEKL 125


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 EVRKPEKLGH 10
E+ KP ++GH
Sbjct: 385 EITKPYEVGH 394


>sp|CIMA_METKA|PUTATIVE (R)-citramalate synthase CimA|Methanopyrus kandleri (strain AV19 /

Query: 5 PEKLGH 10
PEK+GH
Sbjct: 316 PEKVGH 321


>sp|COOS2_METAC|CARBON monoxide dehydrogenase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 VRKPEKL 8
+R+PEKL
Sbjct: 119 IREPEKL 125


>sp|RS19_THEPD|SMALL ribosomal subunit protein uS19|Thermofilum pendens (strain DSM 2475

Query: 5 PEKLGH 10
PEK+GH
Sbjct: 105 PEKIGH 110


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 EVRKPEKL 8
E+R PEKL
Sbjct: 33 EIRVPEKL 40


>sp|SYY_METMP|TYROSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VRKPEKLG 9
V++PEK G
Sbjct: 267 VKRPEKFG 274


>sp|RS19_THEVO|SMALL ribosomal subunit protein uS19|Thermoplasma volcanium (strain ATCC

Query: 4 KPEKLGH 10
KPE +GH
Sbjct: 114 KPEMIGH 120


>sp|RS19_THEAC|SMALL ribosomal subunit protein uS19|Thermoplasma acidophilum (strain

Query: 4 KPEKLGH 10
KPE +GH
Sbjct: 114 KPEMIGH 120


>sp|SYY_METS3|TYROSINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 VRKPEKLG 9
+++PEK G
Sbjct: 267 IKRPEKFG 274


>sp|RS19_PICTO|SMALL ribosomal subunit protein uS19|Picrophilus torridus (strain ATCC

Query: 4 KPEKLGH 10
KPE +GH
Sbjct: 114 KPEMIGH 120


>sp|SYR_METVS|ARGININE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EVRKPEKLGH 10
EVRKP+ L +
Sbjct: 504 EVRKPQILAN 513


>sp|RS19_NANEQ|SMALL ribosomal subunit protein uS19|Nanoarchaeum equitans (strain

Query: 4 KPEKLGH 10
KPE +GH
Sbjct: 103 KPEMIGH 109


>sp|RS19_PYRHO|SMALL ribosomal subunit protein uS19|Pyrococcus horikoshii (strain ATCC

Query: 4 KPEKLGH 10
KPE +GH
Sbjct: 95 KPEMIGH 101


>sp|RS19_THEGJ|SMALL ribosomal subunit protein uS19|Thermococcus gammatolerans (strain

Query: 4 KPEKLGH 10
KPE +GH
Sbjct: 96 KPEMIGH 102




105|SequenceR|530|521|KNQLEEVRKP

>sp|PAND_PYRIL|ASPARTATE 1-decarboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 NQLEEVRK 9
N+L+EVRK
Sbjct: 106 NKLKEVRK 113


>sp|RL4_SULAC|LARGE ribosomal subunit protein uL4|Sulfolobus acidocaldarius (strain

Query: 2 NQLEEVRKP 10
NQLEE+ P
Sbjct: 18 NQLEEIELP 26


>sp|SYY_METBF|TYROSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KNQLEEVRK 9
K LEEVRK
Sbjct: 77 KGTLEEVRK 85


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KNQLEEVRKP 10
+ +LE RKP
Sbjct: 194 RKELERARKP 203


>sp|SYY_METMA|TYROSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KNQLEEVRK 9
K LEEVRK
Sbjct: 77 KGTLEEVRK 85


>sp|Y335_METJA|UNCHARACTERIZED protein MJ0335|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QLEEVRK 9
QLEE+RK
Sbjct: 213 QLEEIRK 219


>sp|Y428_SACS2|UNCHARACTERIZED protein SSO0428|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 QLEEVRKP 10
QLEE+RK
Sbjct: 83 QLEEIRKE 90


>sp|Y352_METJA|UNCHARACTERIZED protein MJ0352|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNQLEEVRK 9
K Q+EE+RK
Sbjct: 25 KKQVEEIRK 33


>sp|TRPC_SACS2|INDOLE-3-GLYCEROL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KNQLEEVRK 9
+N++EE+RK
Sbjct: 216 RNEIEELRK 224


>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNQLEEVRKP 10
K+Q +E +KP
Sbjct: 330 KSQTQETKKP 339


>sp|SYY_METAC|TYROSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KNQLEEVRK 9
K LEEVRK
Sbjct: 77 KGTLEEVRK 85




106|SequenceR|535|526|LCNVIKNQLE

>sp|Y696_METJA|UNCHARACTERIZED protein MJ0696|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NVIKNQLE 10
N+IKNQ+E
Sbjct: 169 NIIKNQIE 176


>sp|RAD50_SULAC|DNA double-strand break repair Rad50|Sulfolobus acidocaldarius (strain

Query: 1 LCNVIKNQLE 10
+ N+++NQ+E
Sbjct: 742 IMNIVRNQIE 751


>sp|RAD50_NANEQ|DNA double-strand break repair Rad50|Nanoarchaeum equitans (strain

Query: 2 CNVIKNQL 9
CN IKN+L
Sbjct: 295 CNEIKNRL 302




107|SequenceR|540|531|TVHDKLCNVI

>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 VHDKLCNVI 10
+HDK+ N++
Sbjct: 241 IHDKIINIV 249


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 DKLCNVI 10
D++CN++
Sbjct: 249 DRMCNIV 255


>sp|ARGC_METMP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TVHDKLCNVI 10
T+H+K NVI
Sbjct: 88 TLHEKGINVI 97




108|SequenceR|545|536|GGNNFTVHDK

>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 1 GGNNFTVHD 9
GG +FTV D
Sbjct: 358 GGRDFTVRD 366


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 1 GGNNFTVHD 9
GG +FTV D
Sbjct: 359 GGRDFTVSD 367


>sp|TF2B_METPE|TRANSCRIPTION initiation factor IIB|Methanosphaerula palustris (strain ATCC

Query: 5 FTVHDK 10
FT+HDK
Sbjct: 95 FTIHDK 100


>sp|TF2B_METMJ|TRANSCRIPTION initiation factor IIB|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 FTVHDK 10
FT+HDK
Sbjct: 98 FTIHDK 103


>sp|TF2B_METB6|TRANSCRIPTION initiation factor IIB|Methanoregula boonei (strain DSM 21154

Query: 5 FTVHDK 10
FT+HDK
Sbjct: 95 FTIHDK 100


>sp|TF2B1_THEVO|TRANSCRIPTION initiation factor IIB 1|Thermoplasma volcanium (strain ATCC 51530

Query: 5 FTVHDK 10
FT+HDK
Sbjct: 73 FTIHDK 78


>sp|Y1518_METJA|UNCHARACTERIZED protein MJ1518|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GNNFTVHD 9
NN T+HD
Sbjct: 356 ANNITLHD 363


>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 1 GGNNFTVH 8
GG+ FT+H
Sbjct: 369 GGDMFTLH 376


>sp|Y646_METJA|UPF0305 protein MJ0646|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NNFTVHD 9
NNF+++D
Sbjct: 15 NNFSIYD 21


>sp|TF2B_METTP|TRANSCRIPTION initiation factor IIB|Methanothrix thermoacetophila (strain DSM

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 98 YTIHDK 103


>sp|TF2B_METTL|TRANSCRIPTION initiation factor IIB|Methanothermococcus thermolithotrophicus

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 100 YTIHDK 105


>sp|TF2B_METTH|TRANSCRIPTION initiation factor IIB|Methanothermobacter thermautotrophicus

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 71 YTIHDK 76


>sp|TF2B_METST|TRANSCRIPTION initiation factor IIB|Methanosphaera stadtmanae (strain ATCC

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 72 YTIHDK 77


>sp|TF2B_METS3|TRANSCRIPTION initiation factor IIB|Methanobrevibacter smithii (strain ATCC

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 71 YTIHDK 76


>sp|TF2B_METMZ|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (Methanosarcina frisia)

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 98 YTIHDK 103


>sp|TF2B_METMP|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain DSM 14266

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 100 YTIHDK 105


>sp|TF2B_METMA|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 98 YTIHDK 103


>sp|TF2B_METM7|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C7 /

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 100 YTIHDK 105


>sp|TF2B_METM6|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C6 /

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 100 YTIHDK 105


>sp|TF2B_METM5|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C5 /

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 100 YTIHDK 105


>sp|TF2B_METAC|TRANSCRIPTION initiation factor IIB|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 98 YTIHDK 103


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 95 YTIHDK 100


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 87 YTIHDK 92


>sp|TF2B1_THEAC|TRANSCRIPTION initiation factor IIB 1|Thermoplasma acidophilum (strain ATCC

Query: 5 FTVHDK 10
+T+HDK
Sbjct: 73 YTIHDK 78


>sp|SUCD_METS5|SUCCINATE-SEMIALDEHYDE dehydrogenase (acetylating)|Metallosphaera sedula (strain ATCC

Query: 1 GGNNFTVH 8
GGN T+H
Sbjct: 257 GGNEDTIH 264




109|SequenceR|550|541|NPRNLGGNNF

>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NPRNLGGNNF 10
N RNLGG F
Sbjct: 27 NVRNLGGKIF 36


>sp|ISCU2_ARCFU|IRON-SULFUR cluster assembly scaffold protein|Archaeoglobus fulgidus (strain

Query: 1 NPRNLG 6
NPRN+G
Sbjct: 12 NPRNVG 17


>sp|ISCU1_ARCFU|IRON-SULFUR cluster assembly scaffold protein|Archaeoglobus fulgidus (strain

Query: 1 NPRNLG 6
NPRN+G
Sbjct: 12 NPRNVG 17


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 2 PRNLGG 7
P+NLGG
Sbjct: 58 PKNLGG 63


Query: 1 NPRNLGGN 8
+P N GGN
Sbjct: 84 HPHNSGGN 91


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 NPRNLGGNNF 10
+P++LGGN +
Sbjct: 775 HPQSLGGNRW 784


>sp|PTR1_METJA|HTH-TYPE transcriptional regulator Ptr1|Methanocaldococcus jannaschii

Query: 1 NPRNLG 6
NP+NLG
Sbjct: 56 NPKNLG 61


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 NPRNLGG 7
NP N GG
Sbjct: 267 NPMNFGG 273


>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 NPRNLGG 7
NP N GG
Sbjct: 267 NPMNFGG 273


>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 NPRNLGG 7
NP N GG
Sbjct: 269 NPMNFGG 275


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 NPRNLGG 7
NP N GG
Sbjct: 270 NPMNFGG 276


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 NPRNLGG 7
NP N GG
Sbjct: 270 NPMNFGG 276


>sp|PELO_THEGJ|PROTEIN pelota homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 3 RNLGGNNF 10
RNLGG +
Sbjct: 164 RNLGGKRY 171


>sp|RNH2_CENSY|RIBONUCLEASE HII|Cenarchaeum symbiosum (strain A)

Query: 1 NPRNLGG 7
NPR GG
Sbjct: 110 NPRRFGG 116


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 1 NPRNLGGN 8
+P N GGN
Sbjct: 84 HPHNSGGN 91


>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NLGGNNF 10
N+GG+N+
Sbjct: 76 NIGGDNY 82




110|SequenceR|555|546|LKSLYNPRNL

>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LKSLYNPRNL 10
LKS Y PR +
Sbjct: 46 LKSTYGPRGM 55


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LKSLYNPRNL 10
LKS Y PR +
Sbjct: 45 LKSTYGPRGM 54


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LKSLYNPRNL 10
LKS Y PR +
Sbjct: 45 LKSTYGPRGM 54


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 LKSLYNPRNL 10
L++LY+PR +
Sbjct: 432 LEALYSPRRM 441


>sp|Y1649_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 2 KSLYNPRNL 10
K+LYNP+++
Sbjct: 54 KALYNPKSV 62


>sp|PYRB_AERPE|ASPARTATE carbamoyltransferase catalytic subunit|Aeropyrum pernix (strain

Query: 3 SLYNPRNL 10
SL+NPR++
Sbjct: 177 SLFNPRHV 184


>sp|DP2S_METTH|DNA polymerase II small subunit|Methanothermobacter thermautotrophicus

Query: 2 KSLYNPRNL 10
KSLY+ RN+
Sbjct: 338 KSLYSIRNI 346


>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LKSLYNP 7
LKS++NP
Sbjct: 325 LKSIFNP 331




111|SequenceR|560|551|PLKGLLKSLY

>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LKGLLKSLY 10
KG+LK+LY
Sbjct: 657 FKGMLKTLY 665


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GLLKSLY 10
GLLKS+Y
Sbjct: 76 GLLKSIY 82


>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LKGLLKSLY 10
L GLL++LY
Sbjct: 27 LDGLLRNLY 35


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 1 PLKGLLKSLY 10
PLK LKSL+
Sbjct: 111 PLKKRLKSLF 120


Query: 1 PLKGLLKSL 9
PLK +LK+L
Sbjct: 147 PLKEMLKTL 155


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PLKGLLKSLY 10
PL+GL+K Y
Sbjct: 269 PLEGLVKVRY 278


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 3 KGLLKSLY 10
KGL+K LY
Sbjct: 349 KGLIKELY 356


>sp|COBQ_METAC|PROBABLE cobyric acid synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PLKGLLKSLY 10
PL+GL+K Y
Sbjct: 269 PLEGLVKVHY 278


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC

Query: 4 GLLKSLY 10
G+LKS+Y
Sbjct: 76 GILKSIY 82


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 4 GLLKSLY 10
G+LKS+Y
Sbjct: 78 GILKSIY 84


>sp|PYLD_METBF|PYRROLYSINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LKGLLKSLY 10
+KG+ K+LY
Sbjct: 35 IKGICKALY 43




112|SequenceR|565|556|LTRLEPLKGL

>sp|RLME_METTP|RIBOSOMAL RNA large subunit methyltransferase|Methanothrix thermoacetophila

Query: 1 LTRLEPLKGL 10
L R+EPL+G+
Sbjct: 69 LERIEPLEGI 78


>sp|GLCD2_PICTO|GLUCOSE/GALACTOSE 1-dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 2 TRLEPLKGL 10
TR +PLKG+
Sbjct: 236 TREDPLKGI 244


>sp|HIS5_THEKO|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus kodakarensis

Query: 1 LTRLEPLKGL 10
+ +LEPL+G+
Sbjct: 48 MEKLEPLRGV 57


>sp|ILVC3_SACS2|PUTATIVE ketol-acid reductoisomerase 3|Saccharolobus solfataricus (strain

Query: 4 LEPLKG 9
LEPLKG
Sbjct: 10 LEPLKG 15


>sp|RL30_HALMA|LARGE ribosomal subunit protein uL30|Haloarcula marismortui (strain

Query: 2 TRLEPLKG 9
TR EPL+G
Sbjct: 68 TRAEPLEG 75


>sp|SYH_METLZ|HISTIDINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 LEPLKGL 10
EPLKGL
Sbjct: 203 FEPLKGL 209


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LTRLEPLKGL 10
T EPL+GL
Sbjct: 264 FTDFEPLEGL 273


>sp|COBQ_METAC|PROBABLE cobyric acid synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LTRLEPLKGL 10
T EPL+GL
Sbjct: 264 FTDFEPLEGL 273


>sp|ILVC_PYRIL|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum islandicum (strain DSM

Query: 4 LEPLKG 9
LEPLKG
Sbjct: 12 LEPLKG 17


>sp|HEM3_PYRAE|PROBABLE porphobilinogen deaminase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RLEPLKG 9
R+EPL+G
Sbjct: 141 RIEPLRG 147


>sp|ILVC_PYRAR|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum arsenaticum (strain DSM

Query: 4 LEPLKG 9
LEPLKG
Sbjct: 12 LEPLKG 17


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 LEPLKGL 10
+EP+KGL
Sbjct: 291 IEPVKGL 297


>sp|HEM3_PYRAR|PROBABLE porphobilinogen deaminase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RLEPLKG 9
R+EPL+G
Sbjct: 141 RVEPLRG 147


>sp|ILVC_PYRAE|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum aerophilum (strain ATCC

Query: 4 LEPLKG 9
LEPLKG
Sbjct: 12 LEPLKG 17


>sp|AROE_ARCFU|SHIKIMATE dehydrogenase (NADP(+))|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTRLEPLKG 9
L+R+E LKG
Sbjct: 167 LSRVEELKG 175




113|SequenceR|570|561|LGQTCLTRLE

>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus jannaschii

Query: 2 GQTCLTR 8
G+TC TR
Sbjct: 98 GRTCFTR 104


>sp|MFNF_METJA|(4- jannaschii (strain ATCC 43067

Query: 3 QTCLTRL 9
++CLTRL
Sbjct: 228 ESCLTRL 234




114|SequenceR|575|566|YFIRQLGQTC

>sp|RPIA_PYRFU|RIBOSE-5-PHOSPHATE isomerase A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YFIRQLGQ 8
YFIR LG+
Sbjct: 34 YFIRYLGE 41


>sp|Y643_PYRHO|UNCHARACTERIZED protein PH0643|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IRQLGQT 9
IRQLG+T
Sbjct: 159 IRQLGRT 165


>sp|RPIA_METTH|RIBOSE-5-PHOSPHATE isomerase A|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 YFIRQLGQ 8
YFI +LG+
Sbjct: 35 YFIEELGR 42




115|SequenceR|580|571|DELKLYFIRQ

>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DELKLYFIRQ 10
DELK Y +Q
Sbjct: 873 DELKFYVFKQ 882


>sp|SUCD2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Archaeoglobus fulgidus (strain

Query: 1 DELKLYF 7
DELK+Y+
Sbjct: 104 DELKMYW 110


>sp|CSG_METJA|S-LAYER protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DELKLYF 7
D+LK+YF
Sbjct: 429 DKLKVYF 435


>sp|Y130_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 2 ELKLYFIRQ 10
ELKL F+R
Sbjct: 242 ELKLRFVRN 250


>sp|ALAXM_SACS2|ALANYL-TRNA editing protein AlaX-M|Saccharolobus solfataricus (strain ATCC

Query: 2 ELKLYFI 8
ELK+YF+
Sbjct: 157 ELKIYFL 163




116|SequenceR|585|576|PPPVLDELKL

>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PPPVLDEL 8
PPP LDE+
Sbjct: 157 PPPELDEV 164


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 2 PPVLDELKL 10
PPV DEL+L
Sbjct: 319 PPVWDELRL 327


>sp|CDPAS_META3|CDP-ARCHAEOL synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PPPVLDEL 8
P P+LD+L
Sbjct: 122 PAPILDQL 129


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 PPPVLDELK 9
P PV++ELK
Sbjct: 851 PDPVVEELK 859


>sp|CDPAS_METKA|CDP-ARCHAEOL synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 PPPVLDEL 8
P PVLD+L
Sbjct: 115 PAPVLDQL 122


>sp|CDPAS_METTH|CDP-ARCHAEOL synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PPPVLDEL 8
P P+LD+L
Sbjct: 115 PAPILDQL 122


>sp|RNZ_PICTO|RIBONUCLEASE Z|Picrophilus torridus (strain ATCC 700027

Query: 1 PPPVLDELK 9
PP +DE+K
Sbjct: 94 PPGTIDEIK 102


>sp|CDPAS_METJA|CDP-ARCHAEOL synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPPVLDEL 8
P P+LD+L
Sbjct: 121 PAPLLDQL 128


>sp|HDG_METBF|HYPOXANTHINE DNA glycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PPVLDE 7
PPV+DE
Sbjct: 7 PPVIDE 12


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PVLDELK 9
PVLDELK
Sbjct: 365 PVLDELK 371


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PPVLDEL 8
PP LD+L
Sbjct: 344 PPTLDDL 350


>sp|KADA_AERPE|ADENYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPPVLDELK 9
P VLDELK
Sbjct: 113 PKHVLDELK 121


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 PPVLDELKL 10
PPV DEL L
Sbjct: 319 PPVWDELTL 327


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 1 PPPVLDE 7
PP +LDE
Sbjct: 1003 PPMILDE 1009


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 1 PPPVLDE 7
PP +LDE
Sbjct: 1007 PPMILDE 1013


>sp|GGGPS_METPE|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaerula palustris (strain ATCC

Query: 1 PPPVLDEL 8
PP V+DE+
Sbjct: 21 PPAVIDEI 28


>sp|RPO10_METBU|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcoides burtonii (strain

Query: 1 PPPVLDELKL 10
P VLD+LK
Sbjct: 30 PATVLDDLKF 39


>sp|VAPC3_AERPE|RIBONUCLEASE VapC3|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPPVLDELK 9
PP VL+E++
Sbjct: 38 PPRVLEEVR 46


>sp|RNP3_PYRFU|RIBONUCLEASE P protein component 3|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PPPVLDELKL 10
PP VLD+ +L
Sbjct: 38 PPGVLDKERL 47


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 1 PPPVLDELK 9
PP DELK
Sbjct: 202 PPKTFDELK 210


>sp|KHK_HALVD|KETOHEXOKINASE volcanii (strain ATCC 29605

Query: 2 PPVLDELK 9
PP DEL+
Sbjct: 355 PPTYDELR 362


>sp|COFG_ARCFU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPPVLDEL 8
PPP L+E+
Sbjct: 210 PPPTLEEM 217


>sp|DNAG_HYPBU|DNA primase DnaG|Hyperthermus butylicus (strain DSM 5456

Query: 1 PPPVLDELK 9
PP V++E+K
Sbjct: 331 PPSVIEEVK 339


>sp|PYRC_PYRAB|DIHYDROOROTASE abyssi (strain GE5 /

Query: 2 PPVLDELKL 10
PPV+DE L
Sbjct: 94 PPVMDEKTL 102




117|SequenceR|590|581|KDIIAPPPVL

>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 2 DIIAPP 7
DIIAPP
Sbjct: 499 DIIAPP 504


>sp|GFCR_METBU|TRANSCRIPTIONAL regulator GfcR|Methanococcoides burtonii (strain DSM 6242

Query: 1 KDIIAPPP 8
KD++AP P
Sbjct: 44 KDVVAPAP 51


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KDIIAPPPV 9
KDI+ P PV
Sbjct: 86 KDILNPKPV 94


>sp|G1PDH_METTH|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 2 DIIAPPPVL 10
D+IAP P L
Sbjct: 255 DMIAPKPAL 263


>sp|THII_AERPE|PROBABLE tRNA sulfurtransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KDIIAPPP 8
+DI PPP
Sbjct: 368 RDIFIPPP 375


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KDIIAPPPV 9
KDI+ P P+
Sbjct: 390 KDIVKPLPI 398


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 1 KDIIAPPPV 9
KDI++ PP+
Sbjct: 391 KDILSKPPI 399


>sp|G1PDH_METST|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaera stadtmanae (strain ATCC

Query: 2 DIIAPPPVL 10
D+IAP P L
Sbjct: 255 DMIAPKPAL 263


>sp|RS19E_ARCFU|SMALL ribosomal subunit protein eS19|Archaeoglobus fulgidus (strain

Query: 1 KDIIAPP 7
KD++APP
Sbjct: 21 KDMVAPP 27


>sp|TDXH1_SULTO|PEROXIREDOXIN 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KDIIAPPPVL 10
+D+I PPP +
Sbjct: 174 QDVIVPPPAI 183


>sp|Y392_METJA|ZINC metalloprotease MJ0392|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KDIIAPPPV 9
KDI+ P PV
Sbjct: 223 KDIMTPNPV 231


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IIAPPP 8
II+PPP
Sbjct: 885 IISPPP 890


>sp|TDXH2_SULME|PEROXIREDOXIN 2|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 1 KDIIAPPP 8
+D+I PPP
Sbjct: 173 QDVIVPPP 180


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 KDIIAPPPVL 10
KDIIA PV
Sbjct: 290 KDIIAGRPVF 299


>sp|TDXH_METMA|PEROXIREDOXIN mazei (strain ATCC BAA-159

Query: 1 KDIIAPPP 8
+D+I PPP
Sbjct: 180 EDVIIPPP 187


>sp|SYFB_AERPE|PHENYLALANINE--TRNA ligase beta subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 DIIAPPPVL 10
++IA PPV+
Sbjct: 200 EVIAAPPVI 208




118|SequenceR|598|586|FPLTDLFLKDIIA

>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 FPLTDLFLKDIIA 13
FP++ LFL D IA
Sbjct: 242 FPVSALFLPDWIA 254


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 4 TDLFLKDIIA 13
+D FLKDI+A
Sbjct: 288 SDKFLKDIVA 297


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 4 TDLFLKDIIA 13
+D FLKDI+A
Sbjct: 293 SDKFLKDIVA 302


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PLTDLFLKDII 12
P+T+LF+ D I
Sbjct: 233 PVTNLFMDDYI 243


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 1 FPLTDLFLKDIIA 13
+P+ D+F+ D A
Sbjct: 144 YPIIDIFINDAFA 156


>sp|LYSJ_SULAC|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfolobus

Query: 1 FPLTDLFLKDIIA 13
FP++ +FL D IA
Sbjct: 242 FPVSVVFLPDHIA 254


>sp|Y1374_SULTO|DNA-BINDING protein STK_13740|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PLTDLFLKDIIA 13
P+TD LK+I+A
Sbjct: 84 PITDEELKEILA 95


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 4 TDLFLKDIIA 13
+D FL+D+IA
Sbjct: 319 SDKFLRDLIA 328


>sp|PGK1_METAC|PHOSPHOGLYCERATE kinase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FPLTDLFLKD 10
+PL D+F+ D
Sbjct: 146 YPLFDVFIND 155


>sp|NCPP_PYRIL|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum islandicum (strain

Query: 1 FPLTDLFLKDII 12
F + D+FL D++
Sbjct: 106 FQVPDIFLNDVL 117


>sp|QUEC_METTP|7-CYANO-7-DEAZAGUANINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PLTDLFLKDII 12
PL D+ KDI+
Sbjct: 164 PLVDMRKKDIV 174


>sp|RL30_CALMQ|LARGE ribosomal subunit protein uL30|Caldivirga maquilingensis (strain

Query: 1 FPLTDLFLK 9
PLTD +LK
Sbjct: 92 LPLTDEYLK 100


>sp|RNP2_METM5|RIBONUCLEASE P protein component 2|Methanococcus maripaludis (strain C5 /

Query: 5 DLFLKDIIA 13
+LF KD+IA
Sbjct: 25 ELFQKDVIA 33


>sp|NCPP_PYRNV|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum neutrophilum (strain

Query: 1 FPLTDLFLKDII 12
F + D+FL D++
Sbjct: 106 FQIPDVFLGDVL 117


>sp|RNP2_METM7|RIBONUCLEASE P protein component 2|Methanococcus maripaludis (strain C7 /

Query: 5 DLFLKDIIA 13
+LF KD+IA
Sbjct: 25 ELFQKDVIA 33


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 4 TDLFLKDIIA 13
++ +LKDIIA
Sbjct: 285 SEKYLKDIIA 294




THE END