NR4A2_HUMAN Blast Output
Archaea
1|Sequence|1|10|MPCVQAQYGS

>sp|RS17_METB6|SMALL ribosomal subunit protein uS17|Methanoregula boonei (strain DSM

Query: 2 PCVQAQYGS 10
PC+QA+ G
Sbjct: 76 PCIQAKVGD 84


>sp|FEN_METPE|FLAP endonuclease 1|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 MPCVQA 6
+PCVQA
Sbjct: 145 VPCVQA 150




2|Sequence|6|15|AQYGSSPQGA

>sp|GATB_METHJ|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 1 AQYGSSPQGA 10
+QYG SP+ A
Sbjct: 302 SQYGVSPEHA 311


>sp|RLME_PICTO|RIBOSOMAL RNA large subunit methyltransferase|Picrophilus torridus (strain

Query: 2 QYGSSPQG 9
++GSSP G
Sbjct: 42 EFGSSPGG 49


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YGSSPQG 9
YGSSP G
Sbjct: 318 YGSSPIG 324


>sp|ILVC3_SACS2|PUTATIVE ketol-acid reductoisomerase 3|Saccharolobus solfataricus (strain

Query: 2 QYGSSPQGA 10
+YG SP+ A
Sbjct: 216 EYGVSPEAA 224


>sp|MOAE_HALVD|PROBABLE molybdopterin synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 AQYGSSPQG 9
A YG SP G
Sbjct: 47 AAYGLSPDG 55


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YGSSPQG 9
YGSSP G
Sbjct: 319 YGSSPIG 325


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YGSSPQG 9
YGSSP G
Sbjct: 318 YGSSPIG 324


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 AQYGSSPQG 9
+YG +P+G
Sbjct: 48 GRYGKAPEG 56


>sp|ILVC2_SACS2|PUTATIVE ketol-acid reductoisomerase 2|Saccharolobus solfataricus (strain

Query: 2 QYGSSPQGA 10
+YG SP+ A
Sbjct: 216 EYGVSPEAA 224


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 AQYGSSPQGA 10
+YG +P+G+
Sbjct: 48 GRYGKAPEGS 57


>sp|RS19E_HALMA|SMALL ribosomal subunit protein eS19|Haloarcula marismortui (strain

Query: 1 AQYGSSPQG 9
++YG+S QG
Sbjct: 75 SEYGTSKQG 83


>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 3 YGSSPQ 8
YG+SPQ
Sbjct: 285 YGTSPQ 290


>sp|RS6E_METM7|SMALL ribosomal subunit protein eS6|Methanococcus maripaludis (strain C7

Query: 2 QYGSSPQGA 10
+YGS+P G
Sbjct: 110 EYGSAPLGG 118


>sp|RS6E_METMP|SMALL ribosomal subunit protein eS6|Methanococcus maripaludis (strain DSM

Query: 2 QYGSSPQGA 10
+YGS+P G
Sbjct: 110 EYGSAPLGG 118




3|Sequence|11|20|SPQGASPASQ

>sp|ARLY_PYRAE|ARGININOSUCCINATE lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SPQGASPA 8
SP GA PA
Sbjct: 187 SPLGAGPA 194


>sp|ARLY_PYRAR|ARGININOSUCCINATE lyase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SPQGASPA 8
SP GA PA
Sbjct: 187 SPLGAGPA 194


>sp|APE1_AERPE|HOMING endonuclease I-ApeI|Aeropyrum pernix (strain ATCC 700893

Query: 1 SPQGASPAS 9
+PQG PA+
Sbjct: 214 APQGVEPAA 222


>sp|ARLY_PYRIL|ARGININOSUCCINATE lyase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SPQGASPA 8
SP GA PA
Sbjct: 187 SPLGAGPA 194




4|Sequence|16|25|SPASQSYSYH

>sp|WECBH_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase homolog|Methanococcus maripaludis (strain DSM 14266

Query: 1 SPASQSYSY 9
+PAS++Y+Y
Sbjct: 331 NPASETYNY 339


>sp|Y169_METJA|UNCHARACTERIZED ATP-binding protein MJ0169|Methanocaldococcus jannaschii (strain

Query: 1 SPASQSY 7
SPASQ+Y
Sbjct: 220 SPASQAY 226


>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 SPASQSYSY 9
+PAS+SY++
Sbjct: 16 APASKSYTH 24


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 3 ASQSYSYH 10
A Q+Y+YH
Sbjct: 115 AVQTYTYH 122


>sp|AROA_METB6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 SPASQSY 7
+PASQSY
Sbjct: 191 TPASQSY 197


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 2 PASQSYSYH 10
P S Y YH
Sbjct: 310 PTSSHYDYH 318


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 PASQSYSY 9
PAS+SY++
Sbjct: 17 PASKSYTH 24


>sp|SFSA_METS3|SUGAR fermentation stimulation protein homolog|Methanobrevibacter smithii

Query: 5 QSYSYH 10
Q YSYH
Sbjct: 96 QGYSYH 101


>sp|AROA_METST|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 SPASQSYSYH 10
+PAS+SYS+
Sbjct: 17 APASKSYSHR 26


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 2 PASQSYSYH 10
P S Y YH
Sbjct: 310 PTSSHYDYH 318


>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SPASQSYS 8
SPA+ SYS
Sbjct: 346 SPATNSYS 353




5|Sequence|21|30|SYSYHSSGEY

>sp|Y1479_METJA|UNCHARACTERIZED aminotransferase MJ1479|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SYSYHSSGE 9
SYS HSS E
Sbjct: 128 SYSTHSSAE 136


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 3 SYHSSGEY 10
S+H GEY
Sbjct: 565 SFHDGGEY 572


>sp|PRIS_METKA|DNA primase small subunit PriS|Methanopyrus kandleri (strain AV19 /

Query: 4 YHSSGEY 10
YHS+G++
Sbjct: 59 YHSTGKF 65


>sp|Y1441_METTH|UPF0285 protein MTH_1441|Methanothermobacter thermautotrophicus (strain

Query: 1 SYSYHSSGE 9
+YS+H+S E
Sbjct: 129 AYSHHASPE 137


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 1 SYSYHSSGEY 10
SY YH G++
Sbjct: 314 SYDYHKLGKF 323


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 1 SYSYHS 6
SY YHS
Sbjct: 199 SYDYHS 204




6|Sequence|26|35|SSGEYSSDFL

>sp|RNZ_PYRFU|RIBONUCLEASE Z|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SSGEYSSDFL 10
+SGE+ S+FL
Sbjct: 93 NSGEFISNFL 102


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 GEYSSDF 9
GEY SDF
Sbjct: 425 GEYISDF 431


>sp|Y002_METJA|UNCHARACTERIZED protein MJ0002|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SGEYSSDF 9
SGE+ SDF
Sbjct: 155 SGEFKSDF 162


>sp|Y693_METJA|UNCHARACTERIZED protein MJ0693|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GEYSSDFL 10
GEY DF+
Sbjct: 102 GEYKVDFI 109


>sp|FEN_AERPE|FLAP endonuclease 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 GEYSSDFL 10
GEY D+L
Sbjct: 273 GEYDPDYL 280


>sp|ENO_THEVO|ENOLASE volcanium (strain ATCC 51530

Query: 2 SGEYSSDFL 10
SGE + DFL
Sbjct: 356 SGETTDDFL 364


>sp|ENO_THEAC|ENOLASE acidophilum (strain ATCC 25905

Query: 2 SGEYSSDFL 10
SGE + DFL
Sbjct: 356 SGETTDDFL 364




7|Sequence|31|40|SSDFLTPEFV

>sp|THIL_PYRAB|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 DFLTPE 8
DF+TPE
Sbjct: 52 DFMTPE 57


>sp|SYY_METST|TYROSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 SDFLTPEFV 10
SD +TPE++
Sbjct: 111 SDRMTPEYI 119


>sp|THIL_PYRHO|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DFLTPE 8
DF+TPE
Sbjct: 51 DFMTPE 56


>sp|RIBB_METJA|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SSDFLTPEFV 10
+S F+TPE +
Sbjct: 34 ASQFITPEHI 43


>sp|CDPAS_THEON|CDP-ARCHAEOL synthase|Thermococcus onnurineus (strain NA1)

Query: 4 FLTPEF 9
F+TPEF
Sbjct: 70 FITPEF 75


>sp|Y1005_METJA|UNCHARACTERIZED protein MJ1005|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SSDFLTPEFV 10
+SDF++ EF+
Sbjct: 75 NSDFISGEFL 84


>sp|COFC_META3|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DFLTPE 8
DFLTP+
Sbjct: 20 DFLTPD 25




8|Sequence|36|45|TPEFVKFSMD

>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 1 TPEFVKFSMD 10
TPE V+F D
Sbjct: 586 TPELVRFWAD 595


>sp|CSA2B_SACS2|CRISPR-ASSOCIATED aCascade subunit Cas7/Csa2 2|Saccharolobus solfataricus (strain

Query: 3 EFVKFSMD 10
EF+KFS D
Sbjct: 80 EFIKFSTD 87


>sp|HIS6_METMA|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina mazei (strain

Query: 2 PEFVKFSMD 10
PEF+K S D
Sbjct: 114 PEFIKESSD 122


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PEFVKFSM 9
PEFVKF +
Sbjct: 448 PEFVKFQV 455


>sp|KDGA_PICTO|2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE aldolase|Picrophilus torridus (strain ATCC 700027

Query: 3 EFVKFSMD 10
E +KFSMD
Sbjct: 77 ELMKFSMD 84


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TPEFVK 6
TPEFVK
Sbjct: 723 TPEFVK 728


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 TPEFVK 6
TPEF+K
Sbjct: 805 TPEFIK 810


>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 TPEFVKFSMD 10
TPE K SMD
Sbjct: 125 TPEDAKKSMD 134


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 TPEFVKFSMD 10
TPE K SMD
Sbjct: 125 TPEDAKKSMD 134


>sp|SYC_NANEQ|CYSTEINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PEFVKF 7
PEFV+F
Sbjct: 285 PEFVRF 290


>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 2 PEFVKFSMD 10
PE VKF ++
Sbjct: 253 PEIVKFMLE 261


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 2 PEFVKFSMD 10
PE VKF ++
Sbjct: 253 PEIVKFMLE 261


>sp|ARAT1_THELN|AROMATIC-AMINO-ACID aminotransferase 1|Thermococcus litoralis (strain ATCC 51850

Query: 2 PEFVKFSMD 10
PEFV+ +D
Sbjct: 155 PEFVQIPLD 163


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 1 TPEFVK 6
TPEF+K
Sbjct: 721 TPEFIK 726


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TPEFVK 6
TPEF+K
Sbjct: 721 TPEFIK 726


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 EFVKFSMD 10
EF++F+M+
Sbjct: 824 EFIRFTME 831




9|Sequence|41|50|KFSMDLTNTE

>sp|SYDND_METVS|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KFSMDLTNTE 10
+F+M LTN E
Sbjct: 412 RFTMILTNQE 421


>sp|RLME_METS3|RIBOSOMAL RNA large subunit methyltransferase|Methanobrevibacter smithii

Query: 3 SMDLTNT 9
S+DLTNT
Sbjct: 133 SIDLTNT 139




10|Sequence|46|55|LTNTEITATT

>sp|Y3521_METJA|UNCHARACTERIZED protein MJECL21|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTNTEITAT 9
++NT+ITA+
Sbjct: 199 ISNTQITAS 207




11|Sequence|51|60|ITATTSLPSF

***** No hits found ******


12|Sequence|56|65|SLPSFSTFMD

>sp|CDVB2_SULAC|CELL division protein B2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SLPSFSTFMD 10
SLPSF+T +D
Sbjct: 202 SLPSFATSVD 211


>sp|MPTA_METMP|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain DSM 14266

Query: 2 LPSFSTFMD 10
LP+F F+D
Sbjct: 42 LPTFEVFVD 50


>sp|MPTA_METM7|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C7 /

Query: 2 LPSFSTFMD 10
LP+F F+D
Sbjct: 42 LPTFEVFVD 50


>sp|MPTA_METM6|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C6 /

Query: 2 LPSFSTFMD 10
LP+F F+D
Sbjct: 42 LPTFEVFVD 50


>sp|MPTA_METM5|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C5 /

Query: 2 LPSFSTFMD 10
LP+F F+D
Sbjct: 42 LPTFEVFVD 50


>sp|MPTA_META3|GTP cyclohydrolase MptA|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LPSFSTFMD 10
LP+F F+D
Sbjct: 41 LPTFEVFVD 49


>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus

Query: 2 LPSFSTFMD 10
LP+F F+D
Sbjct: 45 LPTFDAFVD 53




13|Sequence|61|70|STFMDNYSTG

>sp|Y1113_METJA|PUTATIVE glycosyltransferase MJ1113|Methanocaldococcus jannaschii (strain

Query: 3 FMDNYSTG 10
F+DNY+TG
Sbjct: 160 FLDNYTTG 167


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 STFMDNYSTG 10
S FM+ YST
Sbjct: 769 SIFMEEYSTA 778


>sp|HTPX2_METAC|PROTEASE HtpX homolog 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 STFMDNYST 9
S+FMD +ST
Sbjct: 267 SSFMDIFST 275


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 STFMDNYSTG 10
+TFMDN +G
Sbjct: 346 TTFMDNEISG 355


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 STFMDNYSTG 10
+TFMDN +G
Sbjct: 346 TTFMDNEISG 355


>sp|Y538_METJA|UNCHARACTERIZED protein MJ0538|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TFMDNYSTG 10
+FMD Y G
Sbjct: 108 SFMDTYKIG 116


>sp|GLYA_METS3|SERINE hydroxymethyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 3 FMDNYST 9
FMD Y+T
Sbjct: 400 FMDQYTT 406


>sp|SECY_SULAC|PROTEIN translocase subunit SecY|Sulfolobus acidocaldarius (strain ATCC

Query: 1 STFMDNYSTG 10
+TF+ Y TG
Sbjct: 419 ATFLGTYGTG 428


>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 FMDNYS 8
FM+NYS
Sbjct: 252 FMENYS 257




14|Sequence|66|75|NYSTGYDVKP

>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 YSTGYDVKP 10
+STGY V+P
Sbjct: 264 FSTGYSVEP 272


>sp|PSB1_THEGJ|PROTEASOME subunit beta 1|Thermococcus gammatolerans (strain DSM 15229

Query: 5 GYDVKP 10
GYDVKP
Sbjct: 113 GYDVKP 118


>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YSTGYDVKP 10
+STGY ++P
Sbjct: 264 FSTGYSIEP 272


>sp|UBIX_PYRAB|FLAVIN prenyltransferase UbiX|Pyrococcus abyssi (strain GE5 /

Query: 2 YSTGYDVKP 10
Y TG +VKP
Sbjct: 44 YETGIEVKP 52


>sp|GYAR_THEON|GLYOXYLATE reductase|Thermococcus onnurineus (strain NA1)

Query: 1 NYSTGYD 7
NY+ GYD
Sbjct: 73 NYAVGYD 79


>sp|GYAR_THEKO|GLYOXYLATE reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NYSTGYD 7
NY+ GYD
Sbjct: 73 NYAVGYD 79


>sp|GYAR_THEGJ|GLYOXYLATE reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 NYSTGYD 7
NY+ GYD
Sbjct: 73 NYAVGYD 79


>sp|GYAR_PYRHO|GLYOXYLATE reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NYSTGYD 7
NY+ GYD
Sbjct: 73 NYAVGYD 79


>sp|GYAR_PYRFU|GLYOXYLATE reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NYSTGYD 7
NY+ GYD
Sbjct: 73 NYAVGYD 79


>sp|GYAR_PYRAB|GLYOXYLATE reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 NYSTGYD 7
NY+ GYD
Sbjct: 74 NYAVGYD 80


>sp|DNLI_METTP|DNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 NYSTGYDVK 9
NYS+GY ++
Sbjct: 509 NYSSGYALR 517


>sp|BIOW_METVM|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 1 NYSTGY 6
NY+TGY
Sbjct: 181 NYTTGY 186


>sp|PGP_THEAC|PHOSPHOGLYCOLATE phosphatase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 STGYDVKP 10
STG+D+ P
Sbjct: 111 STGFDIDP 118


>sp|CBIX_HALSA|PROBABLE sirohydrochlorin cobaltochelatase|Halobacterium salinarum (strain

Query: 1 NYSTGYDV 8
+Y TGYD+
Sbjct: 229 DYRTGYDI 236


>sp|KDGA_SULAC|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 STGYDVKP 10
+TGYD+ P
Sbjct: 134 ATGYDIPP 141


>sp|SYP_THEAC|PROLINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NYSTGYDVK 9
N+S YD+K
Sbjct: 230 NFSKNYDIK 238


>sp|Y284_PYRHO|UPF0273 protein PH0284|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 GYDVKP 10
G+DVKP
Sbjct: 74 GWDVKP 79


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NYSTGYDVK 9
N+S YD+K
Sbjct: 230 NFSKNYDIK 238


>sp|EF1B_STAMF|ELONGATION factor 1-beta|Staphylothermus marinus (strain ATCC 43588

Query: 5 GYDVKP 10
GYD++P
Sbjct: 38 GYDIEP 43


>sp|Y1113_METJA|PUTATIVE glycosyltransferase MJ1113|Methanocaldococcus jannaschii (strain

Query: 1 NYSTGYDV 8
NY GYD+
Sbjct: 32 NYKFGYDL 39


>sp|HPRT_METOI|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermococcus okinawensis (strain

Query: 4 TGYDVK 9
TGYDVK
Sbjct: 163 TGYDVK 168


>sp|PUR7_SACS2|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YSTGYDVK 9
Y GYD+K
Sbjct: 211 YRKGYDLK 218


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus fulgidus

Query: 1 NYSTGYDVK 9
N TGYD++
Sbjct: 295 NPKTGYDLR 303


>sp|PSB_PICTO|PROTEASOME subunit beta|Picrophilus torridus (strain ATCC 700027

Query: 5 GYDVKP 10
GYD KP
Sbjct: 110 GYDTKP 115


>sp|CPGS_METST|CYCLIC 2,3-diphosphoglycerate synthetase|Methanosphaera stadtmanae

Query: 3 STGYDVK 9
S GYDVK
Sbjct: 31 SKGYDVK 37


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 NYSTGYDVKP 10
NY +G +KP
Sbjct: 553 NYLSGITIKP 562


>sp|RS3_PYRAR|SMALL ribosomal subunit protein uS3|Pyrobaculum arsenaticum (strain DSM

Query: 2 YSTGYDVK 9
Y GYD K
Sbjct: 162 YKIGYDAK 169


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YSTGYDVKP 10
+ST Y ++P
Sbjct: 264 FSTNYSIEP 272


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GYDVKP 10
GY++KP
Sbjct: 916 GYEIKP 921


>sp|RS3_PYRCJ|SMALL ribosomal subunit protein uS3|Pyrobaculum calidifontis (strain DSM

Query: 2 YSTGYDVK 9
Y GYD K
Sbjct: 162 YKIGYDAK 169


>sp|RS3_PYRAE|SMALL ribosomal subunit protein uS3|Pyrobaculum aerophilum (strain ATCC

Query: 2 YSTGYDVK 9
Y GYD K
Sbjct: 162 YKIGYDAK 169




15|Sequence|71|80|YDVKPPCLYQ

>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 1 YDVKPP 6
YDV+PP
Sbjct: 85 YDVRPP 90


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YDVKPPC 7
Y VKPPC
Sbjct: 136 YFVKPPC 142


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YDVKPPC 7
Y VKPPC
Sbjct: 128 YFVKPPC 134


>sp|SUMT_METIV|UROPORPHYRINOGEN-III C-methyltransferase|Methanobacterium ivanovii

Query: 2 DVKPPCL 8
D+KPP L
Sbjct: 213 DIKPPAL 219


>sp|Y1011_METJA|UNCHARACTERIZED protein MJ1011|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDVKPPCLYQ 10
Y VK CLY+
Sbjct: 62 YSVKALCLYR 71


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 YDVKPP 6
Y++KPP
Sbjct: 75 YEIKPP 80


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YDVKPPC 7
Y VKPPC
Sbjct: 128 YFVKPPC 134


>sp|NADM_METM6|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 YDVKPPCLY 9
Y+VK P LY
Sbjct: 111 YNVKKPELY 119


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YDVKPPCLY 9
YD PP +Y
Sbjct: 322 YDFIPPAVY 330


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VKPPCLY 9
V P CLY
Sbjct: 94 VNPKCLY 100


>sp|TRPB_THEVO|TRYPTOPHAN synthase beta chain|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YDVKPPCLY 9
YD PP +Y
Sbjct: 322 YDFIPPAVY 330




16|Sequence|76|85|PCLYQMPLSG

>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 CLYQMPLSG 10
C YQ PL G
Sbjct: 117 CHYQAPLIG 125


>sp|MCRW_METFV|METHYL-COENZYME M reductase II operon|Methanothermus fervidus (strain ATCC 43054

Query: 1 PCLYQM 6
PC YQM
Sbjct: 112 PCSYQM 117




17|Sequence|81|90|MPLSGQQSSI

***** No hits found ******


18|Sequence|86|95|QQSSIKVEDI

>sp|PSTB_METST|PHOSPHATE import ATP-binding protein PstB|Methanosphaera stadtmanae (strain

Query: 3 SSIKVEDI 10
S+IKVED+
Sbjct: 183 STIKVEDL 190


>sp|TBP2_METMA|TATA-BOX-BINDING protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QSSIKVEDI 10
+SSIK+E++
Sbjct: 3 ESSIKIENV 11


>sp|TBP1_METAC|TATA-BOX-BINDING protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QSSIKVEDI 10
+SSIK+E++
Sbjct: 3 ESSIKIENV 11


>sp|TBP1_METMA|TATA-BOX-BINDING protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QSSIKVEDI 10
+SSIK+E++
Sbjct: 3 ESSIKIENV 11




19|Sequence|91|100|KVEDIQMHNY

>sp|PELO_METHJ|PROTEIN pelota homolog|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KVEDIQMHNY 10
+VED++ H Y
Sbjct: 68 RVEDVEFHEY 77


>sp|YC9A_METJA|UNCHARACTERIZED protein MJ1292.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EDIQMHNY 10
ED+ +HNY
Sbjct: 21 EDVYLHNY 28


>sp|PYRG_CALMQ|CTP synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KVEDIQMHNY 10
+VE I++HN+
Sbjct: 487 RVEAIELHNH 496


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VEDIQMH 8
+EDI+MH
Sbjct: 120 IEDIEMH 126


>sp|GVPF_HALMT|GAS vesicle protein F|Haloferax mediterranei (strain ATCC 33500

Query: 3 EDIQMHN 9
ED+Q+HN
Sbjct: 54 EDVQVHN 60


>sp|Y1633_METJA|UNCHARACTERIZED protein MJ1633|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VEDIQMHNY 10
VEDI + NY
Sbjct: 224 VEDIDLDNY 232


>sp|PELO_METBU|PROTEIN pelota homolog|Methanococcoides burtonii (strain DSM 6242

Query: 1 KVEDIQMHNY 10
+VED++ H +
Sbjct: 69 RVEDVEFHKF 78


>sp|PELO_METPE|PROTEIN pelota homolog|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 KVEDIQMHNY 10
+VE ++ H Y
Sbjct: 68 RVEKVEFHQY 77


>sp|PDXT_METBF|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina barkeri (strain

Query: 3 EDIQMHNY 10
ED+++H Y
Sbjct: 184 EDLRIHQY 191


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 EDIQMHNY 10
EDI+ H+Y
Sbjct: 194 EDIEDHDY 201




20|Sequence|96|105|QMHNYQQHSH

>sp|GPMI_NATPD|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 MHNYQQHSH 10
+H+YQ H H
Sbjct: 119 VHSYQSHLH 127


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 MHNYQQH 8
MHNY+Q+
Sbjct: 228 MHNYKQN 234


>sp|GPMI_HALMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloarcula marismortui (strain ATCC 43049

Query: 2 MHNYQQHSH 10
+H+YQ H H
Sbjct: 133 VHSYQDHLH 141


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 MHNYQQH 8
MHNY+Q+
Sbjct: 228 MHNYKQN 234


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MHNYQQH 8
MHNY+Q+
Sbjct: 228 MHNYKQN 234


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HNYQQHSH 10
H++ +HSH
Sbjct: 255 HSFAKHSH 262


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 MHNYQQH 8
MHNY+Q+
Sbjct: 229 MHNYRQN 235


>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 2 MHNYQQHSH 10
+HN HSH
Sbjct: 35 VHNCMPHSH 43


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 HNYQQHSH 10
H Y++H H
Sbjct: 454 HIYERHRH 461


>sp|CAS6A_METJA|CRISPR-ASSOCIATED endoribonuclease Cas6 1|Methanocaldococcus jannaschii (strain

Query: 1 QMHNYQQ 7
++HNYQ+
Sbjct: 45 RLHNYQK 51


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 MHNYQQHSH 10
+H+Y H H
Sbjct: 127 VHSYMAHIH 135


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 MHNYQQHSH 10
+H+Y H H
Sbjct: 124 IHSYMPHLH 132




21|Sequence|101|110|QQHSHLPPQS

>sp|NADE_SULTO|NH(3)-DEPENDENT NAD(+) synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QHSHLPPQ 9
QH LPP+
Sbjct: 252 QHKRLPPE 259


>sp|NADE_SULAC|NH(3)-DEPENDENT NAD(+) synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QHSHLPPQ 9
QH LPP+
Sbjct: 252 QHKRLPPE 259


>sp|NADE_SACS2|NH(3)-DEPENDENT NAD(+) synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 QHSHLPPQ 9
QH LPP+
Sbjct: 251 QHKRLPPE 258


>sp|NADK_PYRHO|NAD kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QQHSHLPP 8
Q + HLPP
Sbjct: 236 QYYEHLPP 243


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 QQHSHLPPQS 10
+ HSHL P++
Sbjct: 379 KAHSHLEPKN 388


>sp|RS17_SACS2|SMALL ribosomal subunit protein uS17|Saccharolobus solfataricus (strain

Query: 3 HSHLPP 8
H+H+PP
Sbjct: 78 HAHVPP 83


>sp|RL6_METKA|LARGE ribosomal subunit protein uL6|Methanopyrus kandleri (strain AV19 /

Query: 3 HSHLPPQ 9
+SH PP+
Sbjct: 111 YSHFPPE 117


>sp|Y1295_METJA|UNCHARACTERIZED protein MJ1295|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SHLPPQS 10
+H+PP+S
Sbjct: 74 THIPPKS 80


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QQHSHLPPQS 10
+++ HLPP +
Sbjct: 204 EENPHLPPNA 213


>sp|RS17_SULTO|SMALL ribosomal subunit protein uS17|Sulfurisphaera tokodaii (strain

Query: 3 HSHLPP 8
H H+PP
Sbjct: 78 HVHIPP 83


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 QQHSHLPPQS 10
+++ HLPP +
Sbjct: 204 EENPHLPPNA 213


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 QQHSHLPPQS 10
+++ HLPP +
Sbjct: 204 EENPHLPPNA 213


>sp|GVPI_HALMT|GAS vesicle protein I|Haloferax mediterranei (strain ATCC 33500

Query: 3 HSHLPPQ 9
HS LPPQ
Sbjct: 90 HSTLPPQ 96


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QHSHLPPQS 10
QH++L P+S
Sbjct: 383 QHAYLMPKS 391


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 2 QHSHLPPQS 10
QH++L P+S
Sbjct: 402 QHAYLMPKS 410




22|Sequence|106|115|LPPQSEEMMP

>sp|RL18_AERPE|LARGE ribosomal subunit protein uL18|Aeropyrum pernix (strain ATCC 700893

Query: 3 PQSEEMMP 10
P SEE++P
Sbjct: 132 PHSEEILP 139


>sp|RL18_META3|LARGE ribosomal subunit protein uL18|Methanococcus aeolicus (strain ATCC

Query: 3 PQSEEMMP 10
P SEE++P
Sbjct: 131 PHSEEILP 138


>sp|PFDA_METTH|PREFOLDIN subunit alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LPPQSEEMMP 10
L PQ+EE++
Sbjct: 125 LSPQAEELLK 134


>sp|GUAAB_METB6|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoregula boonei

Query: 1 LPPQSEEMMP 10
LPP+ + MP
Sbjct: 177 LPPEIQHRMP 186


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LPPQSEE 7
LPP SEE
Sbjct: 238 LPPLSEE 244


>sp|RL18_HYPBU|LARGE ribosomal subunit protein uL18|Hyperthermus butylicus (strain DSM

Query: 3 PQSEEMMP 10
P SEE++P
Sbjct: 132 PHSEEVLP 139




23|Sequence|111|120|EEMMPHSGSV

>sp|NFI_THEVO|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma volcanium (strain

Query: 2 EMMPHSGSV 10
+++PH GSV
Sbjct: 63 KVVPHDGSV 71


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EMMPHSGS 9
E++PH+GS
Sbjct: 129 EVVPHAGS 136


>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EEMMPHSG 8
EE+ PH G
Sbjct: 170 EELRPHIG 177


>sp|IMDH_NITMS|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EEMMPHSGSV 10
E M+P+ G+V
Sbjct: 416 EAMVPYKGTV 425


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EMMPHSGS 9
+ +PHSGS
Sbjct: 129 KTVPHSGS 136


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 1 EEMMPHSG 8
EE+M H G
Sbjct: 304 EELMKHGG 311


>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC

Query: 3 MMPHSGS 9
+ PHSGS
Sbjct: 91 VQPHSGS 97




24|Sequence|116|125|HSGSVYYKPS

>sp|SPEE_PICTO|POLYAMINE aminopropyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 HSGSVYYKP 9
SGS YY+P
Sbjct: 190 QSGSPYYQP 198


>sp|KDGK2_HALVD|2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 1 HSGSVYYKP 9
H G+VY +P
Sbjct: 238 HGGTVYEQP 246


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 3 GSVYYKPS 10
G V+YKP+
Sbjct: 622 GGVHYKPT 629


>sp|Y119_PYRAB|UPF0173 protein PYRAB01190|Pyrococcus abyssi (strain GE5 /

Query: 1 HSGSVYYKPS 10
H G YY PS
Sbjct: 123 HLGDTYYSPS 132


>sp|GATA_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 1 HSGSVYYKPS 10
H G V +KPS
Sbjct: 163 HCGVVGFKPS 172


>sp|LIVM_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 5 VYYKPS 10
+YYKPS
Sbjct: 317 LYYKPS 322


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 HSGSVYYK 8
H G +Y+K
Sbjct: 41 HEGKIYFK 48


>sp|Y020_PYRFU|UPF0173 protein PF0020|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HSGSVYYKPS 10
H G YY P+
Sbjct: 123 HLGDTYYSPA 132


>sp|MFNB_METVS|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GSVYYKP 9
G V+YKP
Sbjct: 60 GDVHYKP 66


>sp|CSG_METBF|MAJOR S-layer protein|Methanosarcina barkeri (strain Fusaro /

Query: 6 YYKPS 10
YYKPS
Sbjct: 102 YYKPS 106


>sp|SPEE_THEVO|POLYAMINE aminopropyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HSGSVYYKP 9
SGS +Y+P
Sbjct: 191 QSGSPFYQP 199


>sp|SYC_METAC|CYSTEINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GSVYYKPS 10
GSVYY+ S
Sbjct: 139 GSVYYRIS 146


>sp|RIBL_METB6|FAD synthase|Methanoregula boonei (strain DSM 21154

Query: 1 HSGSVYY 7
H G VYY
Sbjct: 16 HPGHVYY 22


>sp|PRIS_METTP|DNA primase small subunit PriS|Methanothrix thermoacetophila (strain

Query: 1 HSGSVYYKP 9
HS + Y KP
Sbjct: 69 HSAAYYLKP 77


>sp|Y811_METJA|UNCHARACTERIZED protein MJ0811|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HSGSVY 6
HSGS+Y
Sbjct: 280 HSGSMY 285


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GSVYYKPS 10
GSVYY+ S
Sbjct: 139 GSVYYRIS 146


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 HSGSVYYKPS 10
H G V +KPS
Sbjct: 161 HCGIVGFKPS 170


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 HSGSVYYKPS 10
H G V +KPS
Sbjct: 161 HCGIVGFKPS 170


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 HSGSVYYKPS 10
H G V +KPS
Sbjct: 161 HCGIVGFKPS 170


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 HSGSVYYKPS 10
H G V +KPS
Sbjct: 161 HCGIVGFKPS 170


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 3 GSVYYK 8
GSVYY+
Sbjct: 421 GSVYYR 426


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GSVYYKPS 10
GSVYY+ S
Sbjct: 139 GSVYYRIS 146


>sp|ARGD_METTH|ACETYLORNITHINE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 HSGSVYY 7
HS ++YY
Sbjct: 73 HSSNIYY 79


>sp|SPEE_THEAC|POLYAMINE aminopropyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HSGSVYYKP 9
SGS +Y+P
Sbjct: 191 QSGSPFYQP 199


>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 1 HSGSVYYKPS 10
+S V+Y PS
Sbjct: 25 YSAPVFYNPS 34




25|Sequence|121|130|YYKPSSPPTP

>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YYKPSSPPT 9
YYKP +PP+
Sbjct: 99 YYKPITPPS 107


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YYKPSSPPT 9
YYKP +PP+
Sbjct: 99 YYKPITPPS 107


>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YYKPSSPPT 9
YYKP PP+
Sbjct: 100 YYKPIIPPS 108


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 2 YKPSSPPTP 10
Y P PP+P
Sbjct: 125 YIPGCPPSP 133


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YYKPSSPPTP 10
Y+K S+ PTP
Sbjct: 10 YFKTSADPTP 19


>sp|Y1316_THEGJ|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 3 KPSSPPTP 10
KP+ P TP
Sbjct: 198 KPAEPETP 205


>sp|AGL11_HALVD|LOW-SALT glycan biosynthesis nucleotidyltransferase Agl11|Haloferax volcanii

Query: 3 KPSSPPT 9
KP PPT
Sbjct: 159 KPDEPPT 165


>sp|MTNA_ARCFU|PUTATIVE methylthioribose-1-phosphate isomerase|Archaeoglobus fulgidus

Query: 2 YKPSSPPTP 10
Y P+ PTP
Sbjct: 303 YNPAFDPTP 311


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 2 YKPSSP 7
YKPSSP
Sbjct: 198 YKPSSP 203


>sp|NADE_METAC|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YKPSSPPTP 10
+K SPP P
Sbjct: 245 HKRKSPPVP 253


>sp|LIVM_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 1 YYKPSS--PPTP 10
YYKPS P P
Sbjct: 318 YYKPSGLIPEKP 329


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 4 PSSPPTP 10
PS PP P
Sbjct: 321 PSGPPRP 327


>sp|TRUA_METMP|TRNA pseudouridine synthase A|Methanococcus maripaludis (strain DSM

Query: 2 YKPSSPPTP 10
YK PP+P
Sbjct: 204 YKKGYPPSP 212


>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 1 YYKPSSPPTP 10
YY+ +SP P
Sbjct: 16 YYRRASPALP 25


>sp|FLAB5_PYRHO|FLAGELLIN B5|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YKPSSPP 8
Y PS+PP
Sbjct: 62 YTPSNPP 68




26|Sequence|126|135|SPPTPTTPGF

>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PPTPTTPGF 10
PP P +PG+
Sbjct: 15 PPLPGSPGY 23


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 1 SPPTPTTPGF 10
+PP+P PG
Sbjct: 193 APPSPDDPGL 202


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 2 PPTPTTPG 9
PP P PG
Sbjct: 305 PPYPIIPG 312


>sp|Y1756_PYRFU|UPF0145 protein PF1756|Pyrococcus furiosus (strain ATCC 43587

Query: 4 TPTTPGF 10
TPT PG+
Sbjct: 13 TPTIPGY 19


>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 PPTPTTP 8
PP P TP
Sbjct: 443 PPVPETP 449


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 SPPTPTTPG 9
+P +PT PG
Sbjct: 247 APTSPTFPG 255


>sp|RL10_THESM|LARGE ribosomal subunit protein uL10|Thermococcus sibiricus (strain DSM

Query: 3 PTPTTPG 9
PTP +PG
Sbjct: 127 PTPLSPG 133


>sp|NFI_IGNH4|ENDONUCLEASE V|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PTPTTPGF 10
P P PGF
Sbjct: 70 PIPYVPGF 77


>sp|PYLS_METTE|PYRROLYSINE--TRNA ligase|Methanosarcina thermophila

Query: 1 SPPTPTTP 8
S P PTTP
Sbjct: 131 SQPAPTTP 138


>sp|DHE4_PYRCJ|NADP(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 PTTPG 9
PTTPG
Sbjct: 324 PTTPG 328


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain ATCC

Query: 3 PTPTTPG 9
PT +TPG
Sbjct: 165 PTSSTPG 171


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 3 PTPTTPG 9
PT +TPG
Sbjct: 165 PTSSTPG 171


>sp|DHE2_PYRCJ|NAD(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 PTTPG 9
PTTPG
Sbjct: 327 PTTPG 331


>sp|AROA_THEKO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 PPTPTTPGF 10
PP +PGF
Sbjct: 68 PPEEPSPGF 76


>sp|NFI_DESA1|ENDONUCLEASE V|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 PPTPTTPGF 10
PP P PG
Sbjct: 73 PPIPYVPGL 81


>sp|RL18E_PYRAE|LARGE ribosomal subunit protein eL18|Pyrobaculum aerophilum (strain

Query: 2 PPTPTTP 8
PP PT P
Sbjct: 2 PPNPTGP 8




27|Sequence|131|140|TTPGFQVQHS

>sp|GVPK2_HALSA|GAS vesicle protein K2|Halobacterium salinarum (strain ATCC 700922

Query: 1 TTPGFQVQHS 10
+TPGF+ QHS
Sbjct: 100 STPGFEPQHS 109


>sp|RTCA_PYRIL|RNA 3'-terminal phosphate cyclase|Pyrobaculum islandicum (strain DSM

Query: 1 TTPGFQVQH 9
T PG Q QH
Sbjct: 41 TNPGLQPQH 49


>sp|NADC_ARCFU|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 1 TTPGFQV 7
TTPGF++
Sbjct: 112 TTPGFRI 118


>sp|RL5_CALMQ|LARGE ribosomal subunit protein uL5|Caldivirga maquilingensis (strain

Query: 3 PGFQVQH 9
PGF+VQ+
Sbjct: 157 PGFRVQY 163


>sp|NCPP_METKA|PROBABLE inosine/xanthosine triphosphatase|Methanopyrus kandleri (strain

Query: 1 TTPGFQV 7
T+PGFQ+
Sbjct: 101 TSPGFQL 107


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 4 GFQVQHS 10
GF+VQH+
Sbjct: 56 GFRVQHN 62


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GFQVQHS 10
GF+VQH+
Sbjct: 56 GFRVQHN 62


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GFQVQHS 10
GF+VQH+
Sbjct: 56 GFRVQHN 62


>sp|RTCA_HALSA|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain

Query: 1 TTPGFQVQH 9
+ PG Q QH
Sbjct: 38 SNPGLQAQH 46


>sp|RTCA_HALS3|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain

Query: 1 TTPGFQVQH 9
+ PG Q QH
Sbjct: 38 SNPGLQAQH 46


>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 1 TTPGFQVQH 9
+ PG Q QH
Sbjct: 40 SNPGLQPQH 48


>sp|PURT_METAR|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocella

Query: 2 TPGFQVQH 9
+PG QV H
Sbjct: 51 SPGMQVAH 58




28|Sequence|136|145|QVQHSPMWDD

>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QVQHSPMWDD 10
+V+H MWDD
Sbjct: 58 EVRHIHMWDD 67


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 QVQHSPMWDD 10
+V+H MWDD
Sbjct: 58 EVRHIHMWDD 67


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QVQHSPMWDD 10
+V+H MWDD
Sbjct: 58 RVRHIHMWDD 67


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VQHSPMWDD 10
V+H MWDD
Sbjct: 59 VRHIHMWDD 67


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QVQHSPMWDD 10
+++H PMWD+
Sbjct: 220 EMEH-PMWDE 228


>sp|NADA_THEGJ|QUINOLINATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VQHSPMWDD 10
++H+P W++
Sbjct: 220 IRHAPEWNE 228


>sp|RELE1_METJA|PUTATIVE toxin RelE1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QVQHSPMWDD 10
+VQ+ +WDD
Sbjct: 63 RVQYVVLWDD 72


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 4 HSPMWD 9
+SP+WD
Sbjct: 456 YSPVWD 461


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 SPMWD 9
SP+WD
Sbjct: 68 SPLWD 72


>sp|NADM_HALMA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QVQHSPMWD 9
+V+ SPM+D
Sbjct: 112 EVRQSPMFD 120


>sp|TF2B3_HALSA|TRANSCRIPTION initiation factor IIB 3|Halobacterium salinarum (strain ATCC

Query: 1 QVQHSPMW 8
Q+ H P W
Sbjct: 53 QIDHGPEW 60


>sp|DDH_HALMT|D-2-HYDROXYACID dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 3 QHSPMWD 9
+ SP+WD
Sbjct: 259 EDSPLWD 265




29|Sequence|141|150|PMWDDPGSLH

>sp|PDXS_AERPE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Aeropyrum pernix (strain ATCC

Query: 2 MWDDP 6
MWDDP
Sbjct: 296 MWDDP 300


>sp|Y1787_METS5|UPF0201 protein Msed_1787|Metallosphaera sedula (strain ATCC 51363

Query: 1 PMWDDP 6
P+WD+P
Sbjct: 134 PLWDNP 139


>sp|Y1243_SACI3|UPF0201 protein M1627_1243|Saccharolobus islandicus (strain M.16.27)

Query: 1 PMWDDP 6
P+WD+P
Sbjct: 135 PLWDNP 140


>sp|Y1179_SACI4|UPF0201 protein M1425_1179|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PMWDDP 6
P+WD+P
Sbjct: 135 PLWDNP 140


>sp|Y1168_SACI6|UPF0201 protein M164_1168|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PMWDDP 6
P+WD+P
Sbjct: 135 PLWDNP 140


>sp|Y1676_SACI1|UPF0201 protein YN1551_1676|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PMWDDP 6
P+WD+P
Sbjct: 135 PLWDNP 140


>sp|Y1276_SACI2|UPF0201 protein LS215_1276|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PMWDDP 6
P+WD+P
Sbjct: 135 PLWDNP 140


>sp|Y1175_SACI7|UPF0201 protein YG5714_1175|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PMWDDP 6
P+WD+P
Sbjct: 135 PLWDNP 140


>sp|Y1042_SACS2|UPF0201 protein SSO1042|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PMWDDP 6
P+WD+P
Sbjct: 135 PLWDNP 140


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PMWDDPGSL 9
P WD+P L
Sbjct: 180 PRWDNPEDL 188


>sp|DEOC_AERPE|DEOXYRIBOSE-PHOSPHATE aldolase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PMWDD 5
P+WDD
Sbjct: 144 PLWDD 148


>sp|DAPA_METPE|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 WDDPGSLH 10
WDD SLH
Sbjct: 228 WDDAISLH 235


>sp|PDXS_HALWD|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Haloquadratum walsbyi (strain

Query: 3 WDDPGSL 9
WDDP L
Sbjct: 266 WDDPDEL 272


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MWDDPG 7
+W DPG
Sbjct: 109 LWTDPG 114


>sp|PDXS_HALLT|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halorubrum lacusprofundi (strain

Query: 3 WDDPGSL 9
WDDP L
Sbjct: 266 WDDPDEL 272


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 PMWDDPGSLH 10
P W D LH
Sbjct: 428 PFWKDGTKLH 437


>sp|Y544_THEVO|UNCHARACTERIZED solute-binding protein TV0544|Thermoplasma volcanium (strain ATCC

Query: 1 PMWDDPGSL 9
P WD+ G+L
Sbjct: 305 PAWDNVGNL 313


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 1 PMWDDPG 7
P W DPG
Sbjct: 304 PGWYDPG 310


>sp|PDXS_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum aerophilum (strain

Query: 3 WDDPGSL 9
WDDP ++
Sbjct: 298 WDDPETV 304


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WDDP 6
WDDP
Sbjct: 349 WDDP 352


>sp|PDXS_PYRCJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum calidifontis (strain

Query: 3 WDDP 6
WDDP
Sbjct: 298 WDDP 301


>sp|PDXS_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum arsenaticum (strain

Query: 3 WDDP 6
WDDP
Sbjct: 299 WDDP 302


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PMWDDP 6
P WD P
Sbjct: 191 PKWDSP 196


>sp|SYC_META3|CYSTEINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PMWDDP 6
P WD P
Sbjct: 190 PKWDSP 195


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 3 WDDP 6
WDDP
Sbjct: 237 WDDP 240


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PMWDDP 6
P WD P
Sbjct: 192 PKWDSP 197


>sp|PDXS_DESA1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Desulfurococcus amylolyticus

Query: 3 WDDPGSL 9
WDDP ++
Sbjct: 297 WDDPETV 303


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 2 MWDDPG 7
+WD PG
Sbjct: 9 LWDKPG 14


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 DDPGSLH 10
+DPGS+H
Sbjct: 782 NDPGSVH 788


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 2 MWDDPG 7
+WD PG
Sbjct: 9 LWDKPG 14


>sp|PDXS_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Hyperthermus butylicus (strain

Query: 3 WDDPGSL 9
WDDP ++
Sbjct: 297 WDDPETV 303


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PMWDDP 6
P WD P
Sbjct: 190 PYWDSP 195


>sp|HIS5_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 4 DDPGSLH 10
DDP LH
Sbjct: 31 DDPSELH 37


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 WDDP 6
WDDP
Sbjct: 341 WDDP 344


>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 MWDDP 6
MW+DP
Sbjct: 483 MWNDP 487


>sp|Y1052_THEAC|UNCHARACTERIZED solute-binding protein Ta1052|Thermoplasma acidophilum (strain ATCC

Query: 1 PMWDDPGSL 9
P WD+ G+L
Sbjct: 318 PAWDNVGNL 326


>sp|DTDA_HALMA|D-AMINOACYL-TRNA deacylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PMWDDP 6
P W+DP
Sbjct: 159 PQWEDP 164


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 WDDP 6
WDDP
Sbjct: 350 WDDP 353


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PMWDDP 6
P WD P
Sbjct: 196 PWWDSP 201


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain

Query: 2 MWDDPG 7
+WD PG
Sbjct: 9 LWDKPG 14


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 WDDP 6
WDDP
Sbjct: 356 WDDP 359


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 WDDP 6
WDDP
Sbjct: 348 WDDP 351


>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 3 WDDP 6
WDDP
Sbjct: 466 WDDP 469


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 PMWDDP 6
P WD P
Sbjct: 189 PYWDSP 194


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 WDDP 6
WDDP
Sbjct: 346 WDDP 349


>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WDDP 6
WDDP
Sbjct: 356 WDDP 359


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 WDDP 6
WDDP
Sbjct: 347 WDDP 350


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 3 WDDP 6
WDDP
Sbjct: 261 WDDP 264


>sp|SYE_METTH|GLUTAMATE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 WDDP 6
WDDP
Sbjct: 347 WDDP 350


>sp|SRP19_METKA|SIGNAL recognition particle 19 kDa|Methanopyrus kandleri (strain AV19 /

Query: 3 WDDPGSL 9
WDD G L
Sbjct: 72 WDDKGRL 78


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WDDP 6
WDDP
Sbjct: 354 WDDP 357


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 WDDP 6
WDDP
Sbjct: 355 WDDP 358


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WDDP 6
WDDP
Sbjct: 356 WDDP 359


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 WDDP 6
WDDP
Sbjct: 361 WDDP 364


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 MWDDPG 7
+WD PG
Sbjct: 85 VWDKPG 90


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 WDDP 6
WDDP
Sbjct: 356 WDDP 359


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 WDDPGSL 9
WD GSL
Sbjct: 520 WDSAGSL 526


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 WDDP 6
WDDP
Sbjct: 355 WDDP 358


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 MWDDPGS 8
+WDD G+
Sbjct: 30 VWDDEGN 36


>sp|RMLC_METTH|DTDP-4-DEHYDRORHAMNOSE 3,5-epimerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 WDDP 6
WDDP
Sbjct: 149 WDDP 152


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain ATCC

Query: 3 WDDPG 7
WDDP
Sbjct: 104 WDDPA 108


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 WDDP 6
WDDP
Sbjct: 361 WDDP 364




30|Sequence|146|155|PGSLHNFHQN

>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GSLHNFHQN 10
G++HN+ QN
Sbjct: 227 GTMHNYRQN 235


>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGSLHNFH 8
PGS H FH
Sbjct: 321 PGSCHYFH 328


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 1 PGSLHNFHQ 9
PGS N H+
Sbjct: 640 PGSFSNIHE 648


>sp|DPHB_HALSA|DIPHTHINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PGSLHNFHQN 10
PGSLH+ ++
Sbjct: 238 PGSLHHIERD 247


>sp|DPHB_HALS3|DIPHTHINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PGSLHNFHQN 10
PGSLH+ ++
Sbjct: 238 PGSLHHIERD 247


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 PGSLHNFHQN 10
PG+L N H N
Sbjct: 259 PGTLSNHHLN 268


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PGSLHNFHQN 10
PG L N H N
Sbjct: 253 PGVLSNHHLN 262


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 PGSLHNFHQN 10
PG L N H N
Sbjct: 253 PGVLSNHHLN 262


>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 1 PGSLHNFH 8
P LH FH
Sbjct: 170 PCKLHGFH 177


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 SLHNFH 8
SLH FH
Sbjct: 731 SLHGFH 736


>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGSLHNFHQN 10
PG L FH +
Sbjct: 81 PGMLFGFHSS 90




31|Sequence|151|160|NFHQNYVATT

>sp|DAPB_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 FHQNY 6
FHQNY
Sbjct: 205 FHQNY 209


>sp|Y1287_METJA|UNCHARACTERIZED protein MJ1287|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FHQNYVATT 10
+H+N++A T
Sbjct: 68 YHENWIAGT 76




32|Sequence|156|165|YVATTHMIEQ

>sp|Y762_METJA|UNCHARACTERIZED transporter MJ0762|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YVATTHMI 8
Y+A+TH++
Sbjct: 289 YIASTHLV 296


>sp|Y576_METJA|UNCHARACTERIZED transporter MJ0576|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YVATTHMI 8
YVA++H++
Sbjct: 296 YVASSHLV 303


>sp|RLME_META3|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus aeolicus (strain

Query: 2 VATTHMIEQ 10
+ATTH++ +
Sbjct: 145 IATTHLLRK 153




33|Sequence|161|170|HMIEQRKTPV

>sp|MOAC_THEAC|PROBABLE cyclic pyranopterin monophosphate synthase|Thermoplasma acidophilum

Query: 1 HMIEQRKTPV 10
H++E+RKTPV
Sbjct: 134 HVVEKRKTPV 143


>sp|CCA_THEVO|CCA-ADDING enzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 3 IEQRKTP 9
+E+RKTP
Sbjct: 375 VEERKTP 381


>sp|DPCKG_HALMA|GTP-DEPENDENT dephospho-CoA kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HMIEQRKTP 9
H+IE +TP
Sbjct: 48 HLIEAGRTP 56


>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HMIEQRKTP 9
+++EQRK P
Sbjct: 30 NILEQRKAP 38


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 1 HMIEQRKTPV 10
HM E R+T V
Sbjct: 186 HMAELRRTAV 195


>sp|SYC_NANEQ|CYSTEINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 HMIEQRKTP 9
H++E +K P
Sbjct: 168 HLLEDKKNP 176


>sp|SYY_PYRCJ|TYROSINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 EQRKTPV 10
E+RKTP+
Sbjct: 295 EERKTPL 301


>sp|RL10_METAC|LARGE ribosomal subunit protein uL10|Methanosarcina acetivorans (strain

Query: 2 MIEQRKTP 9
++EQ KTP
Sbjct: 103 LLEQTKTP 110


>sp|RL10_METMA|LARGE ribosomal subunit protein uL10|Methanosarcina mazei (strain ATCC

Query: 2 MIEQRKTP 9
++EQ KTP
Sbjct: 103 LLEQTKTP 110




34|Sequence|166|175|RKTPVSRLSL

>sp|KPRS_THEKO|RIBOSE-PHOSPHATE pyrophosphokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 TPVSRLSL 10
TPVSR+S+
Sbjct: 265 TPVSRISI 272


>sp|MPTA_METLZ|GTP cyclohydrolase MptA|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RKTPVSRLS 9
R+TPVS+ S
Sbjct: 116 RETPVSKTS 124


>sp|MPTA_METKA|GTP cyclohydrolase MptA|Methanopyrus kandleri (strain AV19 /

Query: 1 RKTPVSRL 8
R+TPV++L
Sbjct: 120 RRTPVTKL 127




35|Sequence|171|180|SRLSLFSFKQ

>sp|SECD_METKA|PROTEIN-EXPORT membrane protein SecD|Methanopyrus kandleri (strain AV19 /

Query: 1 SRLSLFSFK 9
SRLS F FK
Sbjct: 66 SRLSTFGFK 74


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SRLSLFSFK 9
+R+S+FSF+
Sbjct: 223 ARISIFSFE 231




36|Sequence|176|185|FSFKQSPPGT

>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 FKQSPPG 9
F++SPPG
Sbjct: 482 FRKSPPG 488


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 FKQSPPG 9
FK +PPG
Sbjct: 30 FKSTPPG 36


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 3 FKQSPP 8
FKQ+PP
Sbjct: 33 FKQTPP 38


>sp|NOB1_PYRAB|ENDORIBONUCLEASE Nob1|Pyrococcus abyssi (strain GE5 /

Query: 3 FKQSPPG 9
FK+ PPG
Sbjct: 136 FKEMPPG 142


>sp|GATB_ARCFU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Archaeoglobus fulgidus (strain ATCC

Query: 1 FSFKQSPPGT 10
++ QSPP T
Sbjct: 27 LNYHQSPPNT 36


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FSFKQSPPGT 10
F+F + PP T
Sbjct: 43 FTFLEGPPTT 52


>sp|DPCKG_THEON|GTP-DEPENDENT dephospho-CoA kinase|Thermococcus onnurineus (strain NA1)

Query: 5 QSPPGT 10
Q+PPGT
Sbjct: 89 QNPPGT 94


>sp|RS4_SULAC|SMALL ribosomal subunit protein uS4|Sulfolobus acidocaldarius (strain

Query: 3 FKQSPP 8
FKQ+PP
Sbjct: 161 FKQNPP 166


>sp|CBSB_SACS2|CYTOCHROME b558/566 subunit B|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FSFKQS 6
FSFKQS
Sbjct: 26 FSFKQS 31


>sp|CHEB2_METHJ|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanospirillum

Query: 1 FSFKQSPP 8
FSF SPP
Sbjct: 249 FSFSISPP 256


>sp|PFDB_METMJ|PREFOLDIN subunit beta|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 KQSPPG 9
KQ PPG
Sbjct: 114 KQQPPG 119




37|Sequence|181|190|SPPGTPVSSC

>sp|PTH_PYRAE|PEPTIDYL-TRNA hydrolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PPGTPVSSC 10
PPGTP + C
Sbjct: 92 PPGTPTAIC 100


>sp|PURE_METJA|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide mutase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PPGTPVSS 9
PPG PV++
Sbjct: 99 PPGIPVAT 106


>sp|PURE_PYRAB|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide mutase|Pyrococcus abyssi (strain GE5 /

Query: 2 PPGTPVSS 9
PPG PV++
Sbjct: 110 PPGIPVAT 117


>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPGTPVS 8
PPG P+S
Sbjct: 40 PPGRPLS 46


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PPGTP 6
PPGTP
Sbjct: 410 PPGTP 414


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PPGTP 6
PPGTP
Sbjct: 406 PPGTP 410


>sp|PURE_METSM|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanobrevibacter

Query: 2 PPGTPVSS 9
PPG PV++
Sbjct: 294 PPGVPVAT 301


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PPGTPV 7
PPG P+
Sbjct: 115 PPGNPI 120


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PPGTPV 7
PPG P+
Sbjct: 115 PPGNPI 120


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 PPGTPV 7
PPG P+
Sbjct: 112 PPGNPI 117


>sp|LEU1_METMA|PROBABLE 2-isopropylmalate synthase|Methanosarcina mazei (strain ATCC

Query: 2 PPGTPV 7
PP TPV
Sbjct: 286 PPNTPV 291


>sp|LEU1_METAC|PROBABLE 2-isopropylmalate synthase|Methanosarcina acetivorans (strain ATCC

Query: 2 PPGTPV 7
PP TPV
Sbjct: 286 PPNTPV 291


>sp|KPRS_PYRAE|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PGTPVSS 9
PG P+SS
Sbjct: 95 PGEPISS 101


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 2 PPGTPVSS 9
PP TP +S
Sbjct: 144 PPSTPATS 151


>sp|IF2G_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 PGTPVS 8
PGTPVS
Sbjct: 221 PGTPVS 226


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 3 PGTPVSSC 10
PGTP+ C
Sbjct: 525 PGTPILHC 532


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain

Query: 2 PPGTPVSS 9
PPG PV +
Sbjct: 33 PPGDPVDA 40


Query: 2 PPGTPVS 8
PPG P++
Sbjct: 251 PPGQPIT 257


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 PPGTP 6
PPGTP
Sbjct: 110 PPGTP 114


>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus (strain

Query: 2 PPGTPVSS 9
PP TP+ S
Sbjct: 417 PPSTPIHS 424




38|Sequence|186|195|PVSSCQMRFD

>sp|DHYS_METS5|PROBABLE deoxyhypusine synthase|Metallosphaera sedula (strain ATCC 51363

Query: 2 VSSCQMRF 9
VS C +RF
Sbjct: 50 VSECDLRF 57




39|Sequence|191|200|QMRFDGPLHV

>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 DGPLHV 10
DGPLHV
Sbjct: 122 DGPLHV 127


>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 DGPLHV 10
DGPLH+
Sbjct: 116 DGPLHI 121


>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QMRFDGP 7
++RFDGP
Sbjct: 392 RIRFDGP 398


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 3 RFDGPLH 9
R+D PLH
Sbjct: 502 RYDAPLH 508


>sp|GCH3_PYRCJ|GTP cyclohydrolase III|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 RFDGPLHV 10
R +GPLHV
Sbjct: 127 RANGPLHV 134


>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 DGPLHV 10
DGPLH+
Sbjct: 109 DGPLHL 114


>sp|RL24_METTP|LARGE ribosomal subunit protein uL24|Methanothrix thermoacetophila

Query: 1 QMRFDGPLHV 10
+ RF+ PLH+
Sbjct: 11 KARFNAPLHM 20


>sp|DPHB_METAR|DIPHTHINE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 4 FDGPLHV 10
F GPLH+
Sbjct: 227 FGGPLHI 233


>sp|DPHB_METPE|DIPHTHINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 FDGPLHV 10
F GPLHV
Sbjct: 222 FGGPLHV 228


>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 DGPLHV 10
DGPLH+
Sbjct: 111 DGPLHL 116


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 5 DGPLHV 10
DGPLH+
Sbjct: 107 DGPLHL 112


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 FDGPLHV 10
DGP+H+
Sbjct: 295 LDGPVHI 301


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 4 FDGPLHV 10
DGP+H+
Sbjct: 295 LDGPVHI 301


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 4 FDGPLHV 10
DGP+H+
Sbjct: 295 LDGPVHI 301


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 4 FDGPLHV 10
DGP+H+
Sbjct: 295 LDGPVHI 301


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 4 FDGPLHV 10
DGP+H+
Sbjct: 295 LDGPVHI 301


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 4 FDGPLHV 10
DGP+H+
Sbjct: 295 LDGPVHI 301


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 4 FDGPLHV 10
DGP+H+
Sbjct: 295 LDGPVHI 301


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 4 FDGPLHV 10
DGP+H+
Sbjct: 295 LDGPVHI 301


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 RFDGPLHV 10
RFDGP +
Sbjct: 289 RFDGPARI 296


>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 DGPLHV 10
+GPLHV
Sbjct: 125 NGPLHV 130


>sp|SYR_METMA|ARGININE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 DGPLHV 10
+GPLHV
Sbjct: 126 NGPLHV 131


>sp|SYR_METHJ|ARGININE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 DGPLHV 10
+GPLHV
Sbjct: 120 NGPLHV 125


>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 5 DGPLHV 10
+GPLHV
Sbjct: 124 NGPLHV 129


>sp|SYR_METBF|ARGININE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 DGPLHV 10
+GPLHV
Sbjct: 126 NGPLHV 131


>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 5 DGPLHV 10
+GPLHV
Sbjct: 122 NGPLHV 127


>sp|SYR_METAC|ARGININE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 DGPLHV 10
+GPLHV
Sbjct: 124 NGPLHV 129


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 DGPLHV 10
+GPLHV
Sbjct: 16 NGPLHV 21


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 DGPLHV 10
+GPLHV
Sbjct: 119 NGPLHV 124


>sp|PSA_NATPD|PROTEASOME subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QMRFDGPLHV 10
Q+R+D P+ V
Sbjct: 102 QLRYDEPIGV 111


>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 2 MRFDGPLHV 10
+RFDGP V
Sbjct: 283 VRFDGPPRV 291


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 DGPLHV 10
+GPLHV
Sbjct: 119 NGPLHV 124


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 DGPLHV 10
DGP+H+
Sbjct: 108 DGPIHL 113


>sp|RL24_THEPD|LARGE ribosomal subunit protein uL24|Thermofilum pendens (strain DSM

Query: 4 FDGPLHV 10
+D PLH+
Sbjct: 18 YDAPLHI 24




40|Sequence|196|205|GPLHVPMNPE

>sp|TRPD_PICTO|ANTHRANILATE phosphoribosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 GPLHVPMNPE 10
GPL P+NPE
Sbjct: 173 GPLTNPLNPE 182


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GPLHVPMN 8
GP HVP+N
Sbjct: 261 GPGHVPLN 268


>sp|THIC1_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GPLHVPMN 8
GP HVP+N
Sbjct: 261 GPGHVPLN 268


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 GPLHVPMN 8
GP HVP+N
Sbjct: 261 GPGHVPLN 268


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GPLHVPMN 8
GP HVP+N
Sbjct: 265 GPGHVPLN 272


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GPLHVPMN 8
GP HVP+N
Sbjct: 265 GPGHVPLN 272


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GPLHVPMN 8
GP HVP+N
Sbjct: 265 GPGHVPLN 272


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GPLHVPMN 8
GP HVP+N
Sbjct: 265 GPGHVPLN 272


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GPLHVPMN 8
GP HVP+N
Sbjct: 265 GPGHVPLN 272


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GPLHVPMN 8
GP HVP+N
Sbjct: 267 GPGHVPLN 274


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GPLHVPMN 8
GP HVP+N
Sbjct: 265 GPGHVPLN 272


>sp|HIS3_METKA|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 4 HVPMNPE 10
HVP++PE
Sbjct: 3 HVPLDPE 9


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GPLHVPMN 8
GP HVP+N
Sbjct: 265 GPGHVPLN 272


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GPLHVPMN 8
GP HVP+N
Sbjct: 265 GPGHVPLN 272


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GPLHVPMN 8
GP HVP+N
Sbjct: 265 GPGHVPLN 272


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GPLHVPMN 8
GP H+P+N
Sbjct: 266 GPGHIPLN 273


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPLHVPMN 8
GP H+P+N
Sbjct: 265 GPGHIPIN 272


>sp|Y1383_THEVO|MEMO1 family protein TV1383|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GPLHVPMNP 9
GP H PM P
Sbjct: 73 GPNHRPMTP 81


>sp|SERA_METTH|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 LHVPMNPE 10
+HVP+ PE
Sbjct: 201 IHVPLTPE 208


>sp|H669_METJA|PROBABLE ATP-dependent RNA helicase MJ0669|Methanocaldococcus jannaschii

Query: 4 HVPMNPE 10
H+P NPE
Sbjct: 314 HLPQNPE 320


>sp|GLKA_THESM|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 LHVPMNPE 10
+HVP NP+
Sbjct: 139 VHVPQNPK 146


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GPLHVPMN 8
GP H+P+N
Sbjct: 265 GPGHIPIN 272


>sp|TRPD_METMP|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 GPLHVPMNPE 10
GPL P NP+
Sbjct: 170 GPLANPANPK 179


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 GPLHVPMNPE 10
GPL P NP+
Sbjct: 170 GPLANPANPK 179


>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 GPLHVPMNPE 10
GPL P NP+
Sbjct: 170 GPLANPANPK 179


>sp|GLKA_THELN|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus litoralis (strain ATCC

Query: 3 LHVPMNPE 10
+HVP NP+
Sbjct: 139 VHVPQNPK 146


>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 GPLHVPMNPE 10
GPL P NP+
Sbjct: 171 GPLANPANPD 180


>sp|TRPD_METVS|ANTHRANILATE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 GPLHVPMNPE 10
GPL P NP+
Sbjct: 170 GPLANPANPK 179


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 GPLHVPMNPE 10
GPL P NP+
Sbjct: 170 GPLANPANPK 179


>sp|TRPD_PYRFU|ANTHRANILATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GPLHVPMNP 9
GPL P NP
Sbjct: 170 GPLANPANP 178


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 GPLHVPMN 8
GP HVP N
Sbjct: 265 GPGHVPYN 272


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 GPLHVPMN 8
GP HVP N
Sbjct: 265 GPGHVPYN 272


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GPLHVPMN 8
GP HVPM+
Sbjct: 261 GPGHVPMD 268


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 GPLHVPMN 8
GP HVP N
Sbjct: 265 GPGHVPYN 272


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GPLHVPMN 8
GP HVPM+
Sbjct: 260 GPGHVPMD 267


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GPLHVPMN 8
GP HVP N
Sbjct: 265 GPGHVPYN 272


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GPLHVPMN 8
GP HVP++
Sbjct: 265 GPGHVPLD 272


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GPLHVPMN 8
GP HVP++
Sbjct: 262 GPGHVPLD 269


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GPLHVPMN 8
GP HVP N
Sbjct: 265 GPGHVPYN 272


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HVPMNPE 10
HVP NP+
Sbjct: 428 HVPKNPK 434


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPLHVPMN 8
GP HVPM+
Sbjct: 261 GPGHVPMD 268


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GPLHVPMN 8
GP HVPM+
Sbjct: 261 GPGHVPMD 268


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LHVPMNPE 10
LHVP+ P+
Sbjct: 200 LHVPLTPK 207


>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 GPLHVPMN 8
GP HVP++
Sbjct: 265 GPGHVPLD 272


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LHVPMNP 9
+H+P NP
Sbjct: 411 IHIPKNP 417


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GPLHVPMN 8
GP HVP++
Sbjct: 265 GPGHVPLD 272


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LHVPMNP 9
+HVP NP
Sbjct: 413 IHVPENP 419


>sp|TRPCD_ARCFU|TRYPTOPHAN biosynthesis protein TrpCD|Archaeoglobus fulgidus (strain ATCC

Query: 1 GPLHVPMNPE 10
GPL P PE
Sbjct: 393 GPLTNPARPE 402


>sp|SYN_THEAC|ASPARAGINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PLHVPMNPE 10
P ++P++PE
Sbjct: 326 PFYMPVDPE 334


>sp|THIC_THEKO|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GPLHVPMN 8
GP HVP++
Sbjct: 266 GPGHVPID 273


>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GPLHVPMN 8
GP HVP++
Sbjct: 265 GPGHVPID 272


>sp|THIC_THEGJ|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GPLHVPMN 8
GP HVP++
Sbjct: 266 GPGHVPID 273


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GPLHVPMN 8
GP HVP++
Sbjct: 268 GPGHVPLD 275


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 GPLHVPMN 8
GP HVP++
Sbjct: 266 GPGHVPID 273


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GPLHVPMN 8
GP H+P++
Sbjct: 265 GPGHIPLD 272


>sp|F16A1_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 GPLHVPMNP 9
G LHV M+P
Sbjct: 88 GRLHVAMDP 96


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 GPLHVPMN 8
GP HVP++
Sbjct: 265 GPGHVPID 272


>sp|THIC_PYRFU|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GPLHVPMN 8
GP HVP++
Sbjct: 266 GPGHVPID 273


>sp|THIC2_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GPLHVPMN 8
GP H+P++
Sbjct: 265 GPGHIPLD 272


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 4 HVPMNPE 10
H+PM PE
Sbjct: 591 HLPMKPE 597


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LHVPMNPE 10
L +PMNP+
Sbjct: 174 LTIPMNPD 181


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 GPLHVPMN 8
GP HVP++
Sbjct: 266 GPGHVPLD 273


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 3 LHVPMNP 9
+HVP NP
Sbjct: 91 VHVPGNP 97


>sp|FWDD_METJA|PROTEIN FwdD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPLHVPMNP 9
G +++PM P
Sbjct: 74 GMIYIPMGP 82




41|Sequence|201|210|PMNPEPAGSH

>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PMNPEPAGS 9
P+ PEP+G+
Sbjct: 454 PLKPEPSGN 462


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PMNPEPA 7
P+NP PA
Sbjct: 535 PINPTPA 541


>sp|PYRG_THEGJ|CTP synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PMNPEP 6
PMNP P
Sbjct: 512 PMNPAP 517


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 1 PMNPEP 6
PMNP P
Sbjct: 512 PMNPAP 517


>sp|NUCS_METJA|ENDONUCLEASE NucS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PMNPEPAGS 9
P+N +P+GS
Sbjct: 74 PVNWQPSGS 82


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PMNPE 5
PMNPE
Sbjct: 119 PMNPE 123


>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 3 NPEPAGSH 10
NPE AG H
Sbjct: 486 NPESAGCH 493


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 MNPEPAG 8
+NP PAG
Sbjct: 67 INPTPAG 73


>sp|KHSE_AERPE|HOMOSERINE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PMNPEPAG 8
PMNP P G
Sbjct: 179 PMNPVPQG 186


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PMNPEPAGS 9
PM PE GS
Sbjct: 440 PMTPEKPGS 448


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 1 PMNPEPAGS 9
PM PE G+
Sbjct: 306 PMRPEDVGN 314


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 1 PMNPEPAG 8
P PEP G
Sbjct: 74 PPEPEPCG 81


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PMNPEPA 7
P NPEPA
Sbjct: 514 PENPEPA 520


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 3 NPEPAGS 9
NP+P GS
Sbjct: 217 NPDPLGS 223




42|Sequence|206|215|PAGSHHVVDG

>sp|PELO_METS3|PROTEIN pelota homolog|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PAGSHHVVD 9
P GSHH V+
Sbjct: 95 PLGSHHTVE 103


>sp|PELO_METJA|PROTEIN pelota homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PAGSHHVVD 9
P GSHH ++
Sbjct: 93 PLGSHHTIE 101


>sp|PELO_METST|PROTEIN pelota homolog|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PAGSHHVVD 9
P GSHH ++
Sbjct: 95 PLGSHHTIN 103


>sp|PELO_METTH|PROTEIN pelota homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PAGSHHVVD 9
P GSHH ++
Sbjct: 95 PMGSHHTLE 103


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PAGSHHVVD 9
PAG H VVD
Sbjct: 305 PAGKHFVVD 313


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 1 PAGSHHVVD 9
P GS+H +D
Sbjct: 93 PIGSYHTID 101


>sp|PELO_METM7|PROTEIN pelota homolog|Methanococcus maripaludis (strain C7 /

Query: 1 PAGSHHVVD 9
P GS+H +D
Sbjct: 93 PIGSYHTID 101


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 1 PAGSHHVVD 9
P GS+H +D
Sbjct: 93 PIGSYHTID 101


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 1 PAGSHHVVD 9
P GS+H +D
Sbjct: 93 PIGSYHTID 101


>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PAGSHHVVD 9
P GS+H +D
Sbjct: 93 PIGSYHTID 101


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PAGSHHVVDG 10
PAG H+V G
Sbjct: 235 PAGKDHLVAG 244


>sp|PELO_METVS|PROTEIN pelota homolog|Methanococcus vannielii (strain ATCC 35089

Query: 1 PAGSHHVVD 9
P GS+H +D
Sbjct: 93 PIGSYHTLD 101


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 PAGSHHVVD 9
PAG H V+D
Sbjct: 305 PAGKHFVLD 313


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PAGSHHVVDG 10
P G H ++DG
Sbjct: 192 PLGDHDLMDG 201


>sp|THSA_ARCFU|THERMOSOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AGSHHVVD 9
GS HVVD
Sbjct: 378 GGSEHVVD 385


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PAGSHHVVD 9
P+G H VVD
Sbjct: 304 PSGRHFVVD 312


>sp|TRPD_METTH|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 2 AGSHHVVD 9
+GSH VVD
Sbjct: 72 SGSHEVVD 79


>sp|PYRH_METB6|URIDYLATE kinase|Methanoregula boonei (strain DSM 21154

Query: 2 AGSHHVVD 9
AGSH+V+D
Sbjct: 178 AGSHNVLD 185


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PAGSHHVVD 9
P G HH++D
Sbjct: 299 PGGPHHMLD 307


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 1 PAGSHHVVD 9
P G+H+++D
Sbjct: 306 PGGNHYMID 314


>sp|PELO_METKA|PROTEIN pelota homolog|Methanopyrus kandleri (strain AV19 /

Query: 2 AGSHHVVD 9
+GSHH V+
Sbjct: 92 SGSHHTVN 99


>sp|PELO_SULTO|PROTEIN pelota homolog|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GSHHVVD 9
GSHH ++
Sbjct: 90 GSHHTIN 96


>sp|PELO_METS5|PROTEIN pelota homolog|Metallosphaera sedula (strain ATCC 51363

Query: 3 GSHHVVD 9
GSHH ++
Sbjct: 90 GSHHTIN 96


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 1 PAGSHHVVD 9
P G H+++D
Sbjct: 306 PGGEHYMID 314


>sp|ILVD_METM5|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C5 /

Query: 1 PAGSHHVVD 9
P G H+++D
Sbjct: 306 PGGEHYMID 314


>sp|ILVD_METMP|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PAGSHHVVD 9
P G H+++D
Sbjct: 306 PGGEHYMID 314


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 2 AGSHHVVDG 10
AGS+ + DG
Sbjct: 89 AGSYRIFDG 97


>sp|CSG_HALMA|CELL surface glycoprotein|Haloarcula marismortui (strain ATCC 43049

Query: 1 PAGSHHVV 8
P G++HVV
Sbjct: 283 PEGNYHVV 290


>sp|FAU1_AERPE|PROBABLE ribonuclease FAU-1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PAGSHHVVDG 10
P+ + HV+DG
Sbjct: 247 PSTAKHVMDG 256


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PAGSHHVVD 9
P G H ++D
Sbjct: 306 PGGEHFIID 314


>sp|NK_THEAC|NUCLEOSIDE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 SHHVVD 9
+HHV+D
Sbjct: 254 AHHVID 259




43|Sequence|211|220|HVVDGQTFAV

>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 HVVDGQTF 8
H++DG T+
Sbjct: 643 HIIDGNTY 650


>sp|PYRB_SACS2|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus solfataricus

Query: 3 VDGQTFAV 10
+DG+TFA+
Sbjct: 147 IDGRTFAL 154


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 HVVDGQTFAV 10
HV+DG T V
Sbjct: 566 HVIDGPTPGV 575


>sp|Y2198_SACI3|UPF0282 protein M1627_2198|Saccharolobus islandicus (strain M.16.27)

Query: 2 VVDGQTFAV 10
+ DG+TF V
Sbjct: 129 IADGKTFEV 137


>sp|Y2122_SACI6|UPF0282 protein M164_2122|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VVDGQTFAV 10
+ DG+TF V
Sbjct: 129 IADGKTFEV 137


>sp|Y2116_SACI4|UPF0282 protein M1425_2116|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VVDGQTFAV 10
+ DG+TF V
Sbjct: 129 IADGKTFEV 137


>sp|THIL_ARCFU|THIAMINE-MONOPHOSPHATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VDGQTFAV 10
+DG+TF V
Sbjct: 281 IDGKTFEV 288


>sp|FAU1_HALSA|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 700922

Query: 1 HVVDGQTFAV 10
HV DG T V
Sbjct: 128 HVTDGDTLRV 137


>sp|FAU1_HALS3|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 29341

Query: 1 HVVDGQTFAV 10
HV DG T V
Sbjct: 128 HVTDGDTLRV 137


>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 VVDGQTFAV 10
VVDG T AV
Sbjct: 236 VVDGHTEAV 244


>sp|DPCKG_METB6|GTP-DEPENDENT dephospho-CoA kinase|Methanoregula boonei (strain DSM 21154

Query: 2 VVDGQTF 8
VVDGQT
Sbjct: 57 VVDGQTM 63


>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 VVDGQTF 8
+VDG+TF
Sbjct: 19 LVDGETF 25


>sp|GGGPS_HALSA|GERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 VVDGQTF 8
+VDG+TF
Sbjct: 20 LVDGETF 26


>sp|GGGPS_HALS3|GERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 VVDGQTF 8
+VDG+TF
Sbjct: 20 LVDGETF 26


>sp|GGGPS_HALWD|GERANYLGERANYLGLYCERYL phosphate synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VVDGQTF 8
+VDG+TF
Sbjct: 20 LVDGETF 26




44|Sequence|216|225|QTFAVPNPIR

>sp|Y070_ARCFU|UNCHARACTERIZED protein AF_0070|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FAVPNPIR 10
FA+P+P R
Sbjct: 180 FAIPSPTR 187


>sp|LIVG_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus

Query: 1 QTFAVPNPIR 10
+TF +P P++
Sbjct: 82 RTFQIPQPLK 91


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 1 QTFAVPNPIR 10
Q A+P P+R
Sbjct: 4 QDLAIPEPLR 13


>sp|ARLY_METLZ|ARGININOSUCCINATE lyase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 QTFAVPNP 8
Q+F PNP
Sbjct: 441 QSFGSPNP 448


>sp|KAE1B_METHJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 FAVPNP 8
F+VPNP
Sbjct: 269 FSVPNP 274


>sp|CP119_SULTO|CYTOCHROME P450 119|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QTFAVPNPI 9
++FA+P PI
Sbjct: 116 ESFAIPLPI 124


>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 5 VPNPIR 10
VPNPI+
Sbjct: 185 VPNPIK 190


>sp|SYS_HALMA|SERINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 TFAVPNPIR 10
T VP P+R
Sbjct: 426 TITVPEPLR 434


>sp|PSTB3_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain ATCC

Query: 1 QTFAVPNP 8
Q F PNP
Sbjct: 115 QVFQTPNP 122


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 AVPNPIR 10
A PNP+R
Sbjct: 208 AFPNPLR 214


>sp|CARA_METS5|CARBAMOYL phosphate synthase small chain|Metallosphaera sedula (strain ATCC

Query: 3 FAVPNPI 9
+ VPNPI
Sbjct: 68 YGVPNPI 74


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 5 VPNPIR 10
VPNPI+
Sbjct: 416 VPNPIK 421




45|Sequence|221|230|PNPIRKPASM

>sp|RL5_METKA|LARGE ribosomal subunit protein uL5|Methanopyrus kandleri (strain AV19

Query: 2 NPIRKP 7
NP+RKP
Sbjct: 19 NPMRKP 24


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PNPIRKPASM 10
PNP R P M
Sbjct: 172 PNPERDPILM 181


>sp|RL10E_METBU|LARGE ribosomal subunit protein uL16|Methanococcoides burtonii (strain

Query: 4 IRKPASM 10
+RKPASM
Sbjct: 2 VRKPASM 8


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PNPIRKP 7
PNP R P
Sbjct: 185 PNPYRNP 191




46|Sequence|226|235|KPASMGFPGL

>sp|RISB_METMA|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KPASMGFPG 9
KP ++G PG
Sbjct: 97 KPVTLGIPG 105


>sp|RISB_METBF|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KPASMGFPG 9
KP ++G PG
Sbjct: 97 KPVTLGIPG 105


>sp|RISB_METAC|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KPASMGFPG 9
KP ++G PG
Sbjct: 97 KPVTLGIPG 105


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 2 PASMGFPG 9
P MG PG
Sbjct: 45 PVCMGLPG 52


>sp|HCGF_METTH|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanothermobacter

Query: 4 SMGFPG 9
SMG+PG
Sbjct: 23 SMGYPG 28


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 KPASMGFP 8
KP SMG P
Sbjct: 363 KPGSMGKP 370


>sp|KAE1_PYRAR|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum arsenaticum

Query: 1 KPASMGFPGL 10
+ A +GFPG+
Sbjct: 165 REAGLGFPGV 174


>sp|CBID_ARCFU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 MGFPGL 10
+GFPGL
Sbjct: 252 VGFPGL 257


>sp|FPOM_METMA|F(420)H(2) dehydrogenase subunit M|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ASMGFPGL 10
AS+G PGL
Sbjct: 386 ASLGLPGL 393


>sp|AATB_THEPD|A-TYPE ATP synthase subunit B|Thermofilum pendens (strain DSM 2475

Query: 2 PASMGFPG 9
P +G+PG
Sbjct: 269 PGRLGYPG 276


>sp|BIOD_HALMT|ATP-DEPENDENT dethiobiotin synthetase BioD|Haloferax mediterranei (strain ATCC

Query: 1 KPASMGFP 8
KPA G+P
Sbjct: 41 KPAQTGYP 48


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KPASMGFP 8
KP S+ FP
Sbjct: 445 KPGSVAFP 452


>sp|PIMT_METMA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ASMGFPG 9
SMG+PG
Sbjct: 163 GSMGYPG 169


>sp|RL21_PYRAR|LARGE ribosomal subunit protein eL21|Pyrobaculum arsenaticum (strain

Query: 1 KPASMGFPGL 10
KP G PGL
Sbjct: 19 KPRERGVPGL 28




47|Sequence|231|240|GFPGLQIGHA

>sp|HIS8_METLZ|HISTIDINOL-PHOSPHATE aminotransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GFPGLQIGHA 10
G GL+IG+A
Sbjct: 218 GLAGLRIGYA 227


>sp|HIS8_HALWD|HISTIDINOL-PHOSPHATE aminotransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GFPGLQIGHA 10
G GL+IG+A
Sbjct: 225 GLAGLRIGYA 234


>sp|HIS8_HALVD|HISTIDINOL-PHOSPHATE aminotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 GFPGLQIGHA 10
G GL+IG+A
Sbjct: 225 GLAGLRIGYA 234


>sp|PURT_METAR|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocella

Query: 3 PGLQIGH 9
PG+Q+ H
Sbjct: 52 PGMQVAH 58


>sp|FPOI_METMA|F(420)H(2) dehydrogenase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FPGLQIGH 9
FP + IGH
Sbjct: 117 FPQIDIGH 124


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FPGLQIGHA 10
+PG+ +GH
Sbjct: 302 WPGMLLGHG 310


>sp|RS15_PYRIL|SMALL ribosomal subunit protein uS15|Pyrobaculum islandicum (strain DSM

Query: 1 GFPGLQIG 8
GFP QIG
Sbjct: 44 GFPPSQIG 51


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GFPGLQIGHA 10
G GL++G+A
Sbjct: 217 GLAGLRVGYA 226


>sp|RS15_PYRCJ|SMALL ribosomal subunit protein uS15|Pyrobaculum calidifontis (strain

Query: 1 GFPGLQIG 8
GFP QIG
Sbjct: 44 GFPPSQIG 51


>sp|SUCD1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Archaeoglobus fulgidus (strain

Query: 3 PGLQIGHA 10
PG ++GHA
Sbjct: 243 PGKRMGHA 250




48|Sequence|236|245|QIGHASQLLD

>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IGHASQLLD 10
IGH S LLD
Sbjct: 42 IGHYSALLD 50


>sp|PUR5_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IGHASQLLD 10
IGH S LLD
Sbjct: 42 IGHYSALLD 50


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 IGHASQLLD 10
+GH S LLD
Sbjct: 43 LGHYSALLD 51


>sp|PUR5_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 IGHASQLLD 10
IGH + LLD
Sbjct: 42 IGHYAALLD 50


>sp|CBIX_ARCFU|SIROHYDROCHLORIN cobaltochelatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IGHASQL 8
+GH SQL
Sbjct: 8 VGHGSQL 14


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 2 IGHASQ 7
IGHASQ
Sbjct: 602 IGHASQ 607


>sp|RSMA_METM6|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain C6 /

Query: 1 QIGHASQLL 9
+IGH S LL
Sbjct: 251 KIGHLSNLL 259




49|Sequence|241|250|SQLLDTQVPS

>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 2 QLLDTQVP 9
Q LDT++P
Sbjct: 180 QRLDTEIP 187


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 3 LLDTQVP 9
LLDT VP
Sbjct: 218 LLDTDVP 224


>sp|RFRNP_METTH|RNA-FREE ribonuclease P|Methanothermobacter thermautotrophicus (strain

Query: 5 DTQVPS 10
DTQ+PS
Sbjct: 90 DTQIPS 95


>sp|RS10_METHJ|SMALL ribosomal subunit protein uS10|Methanospirillum hungatei JF-1

Query: 2 QLLDTQVP 9
QL+ TQVP
Sbjct: 84 QLMRTQVP 91




50|Sequence|246|255|TQVPSPPSRG

>sp|SDO1_ARCFU|RIBOSOME maturation protein SDO1 homolog|Archaeoglobus fulgidus (strain ATCC

Query: 1 TQVPSPPSR 9
T P PPSR
Sbjct: 116 TNAPHPPSR 124


>sp|Y1852_ARCFU|UNCHARACTERIZED protein AF_1852|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TQVPSPPS 8
T+VPSPP+
Sbjct: 314 TKVPSPPA 321


>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PSPPSR 9
PSPP+R
Sbjct: 19 PSPPAR 24


>sp|NADK_THEGJ|NAD kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 VPSPPSRG 10
VP PP RG
Sbjct: 222 VPLPPERG 229


>sp|TRPC_PYRNV|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PSPPSR 9
PSPP R
Sbjct: 19 PSPPQR 24


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 2 QVPSPPS 8
++PSPP+
Sbjct: 668 KIPSPPN 674


>sp|KORA_ARCFU|2-OXOGLUTARATE synthase subunit KorA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TQVPSPPSRG 10
T +P+ PS+G
Sbjct: 111 TGIPTAPSQG 120




51|Sequence|251|260|PPSRGSPSNE

>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPSRGSPSN 9
PP +G P N
Sbjct: 160 PPFKGCPRN 168


>sp|HERA_SACS2|DNA double-strand break repair helicase|Saccharolobus solfataricus

Query: 1 PPSRGSPSNE 10
PP G+P+ E
Sbjct: 96 PPFAGTPARE 105


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PPSRGSPSNE 10
PP + SP +E
Sbjct: 410 PPGKPSPEDE 419


>sp|RL18_THEKO|LARGE ribosomal subunit protein uL18|Thermococcus kodakarensis (strain

Query: 1 PPSRGS 6
PP+RGS
Sbjct: 110 PPTRGS 115


>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPSRGSP 7
PPS G P
Sbjct: 6 PPSSGKP 12


>sp|RL18_THEGJ|LARGE ribosomal subunit protein uL18|Thermococcus gammatolerans (strain

Query: 1 PPSRGS 6
PP+RGS
Sbjct: 110 PPTRGS 115


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PPSRGSP 7
PPS G P
Sbjct: 6 PPSSGKP 12


>sp|MCRD_METVA|METHYL-COENZYME M reductase operon protein|Methanococcus vannielii

Query: 2 PSRGSPSN 9
P++GSP N
Sbjct: 48 PAKGSPVN 55


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PSRGSPSNE 10
P RG PS +
Sbjct: 409 PPRGKPSRD 417




52|Sequence|256|265|SPSNEGLCAV

>sp|BRIX_METTH|PROBABLE Brix domain-containing ribosomal biogenesis|Methanothermobacter

Query: 2 PSNEGLC 8
P +EGLC
Sbjct: 98 PGSEGLC 104


>sp|FOLD_THEAC|BIFUNCTIONAL protein FolD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SPSNEGLCAV 10
SP N+GL A+
Sbjct: 117 SPYNQGLIAL 126


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 3 SNEGLC 8
SNEG+C
Sbjct: 10 SNEGMC 15


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 3 SNEGLC 8
SNEG+C
Sbjct: 10 SNEGMC 15


>sp|MTRE_METBU|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcoides burtonii (strain

Query: 2 PSNEGLCAV 10
PSN +CA+
Sbjct: 62 PSNALICAI 70


>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SPSNEGL 7
SPS EGL
Sbjct: 183 SPSREGL 189




53|Sequence|261|270|GLCAVCGDNA

>sp|SYP_HALSA|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 CAVCGDNA 10
CA+CGD A
Sbjct: 484 CAICGDEA 491


>sp|SYP_HALS3|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 CAVCGDNA 10
CA+CGD A
Sbjct: 484 CAICGDEA 491


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GLCAVCGDNA 10
G+C VCG A
Sbjct: 141 GICPVCGSEA 150


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 CAVCGDNA 10
C VCGD A
Sbjct: 465 CGVCGDEA 472


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 1 GLCAVCGDN 9
G+C +CG+N
Sbjct: 68 GICDLCGEN 76


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 CAVCGDNA 10
CA+CG++A
Sbjct: 467 CAICGEDA 474


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 1 GLCAVCG 7
G CAVCG
Sbjct: 8 GTCAVCG 14


>sp|SYP_THEAC|PROLINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GLCAVCGDNA 10
G C VCG N
Sbjct: 444 GKCVVCGKNG 453


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 1 GLCAVCGD 8
G C VCGD
Sbjct: 53 GPCLVCGD 60


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 CAVCGD 8
C+VCGD
Sbjct: 408 CSVCGD 413


>sp|SYP_HALLT|PROLINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 CAVCGDNA 10
CA+C D+A
Sbjct: 474 CAICDDDA 481


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLCAVCG 7
G CAVCG
Sbjct: 93 GPCAVCG 99


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 CAVCGD 8
C+VCGD
Sbjct: 408 CSVCGD 413


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 3 CAVCGD 8
C+VCGD
Sbjct: 408 CSVCGD 413


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 3 CAVCGD 8
C+VCGD
Sbjct: 408 CSVCGD 413


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 3 CAVCGD 8
C+VCGD
Sbjct: 408 CSVCGD 413


>sp|ENO_ARCFU|ENOLASE fulgidus (strain ATCC 49558

Query: 3 CAVCGDN 9
C VCGD+
Sbjct: 288 CMVCGDD 294


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 CAVCGDNA 10
CAVCG A
Sbjct: 461 CAVCGREA 468


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LCAVCGD 8
+C++CGD
Sbjct: 407 MCSMCGD 413


>sp|HYPA_METAC|HYDROGENASE maturation factor HypA|Methanosarcina acetivorans (strain ATCC

Query: 3 CAVCGDNA 10
C VCG NA
Sbjct: 105 CPVCGKNA 112


>sp|TFE_PYRNV|TRANSCRIPTION factor E|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GLCAVCG 7
G+C VCG
Sbjct: 139 GVCPVCG 145


>sp|TFE_PYRIL|TRANSCRIPTION factor E|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GLCAVCG 7
G+C VCG
Sbjct: 139 GVCPVCG 145


>sp|TFE_PYRAE|TRANSCRIPTION factor E|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GLCAVCG 7
G+C VCG
Sbjct: 139 GVCPVCG 145


>sp|RAD50_THEVO|DNA double-strand break repair Rad50|Thermoplasma volcanium (strain

Query: 1 GLCAVCG 7
G+C VCG
Sbjct: 453 GVCPVCG 459


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CAVCGDN 9
C VCG+N
Sbjct: 448 CHVCGEN 454


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GLCAVCG 7
G+C VCG
Sbjct: 146 GICDVCG 152


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GLCAVCG 7
G+C VCG
Sbjct: 146 GICDVCG 152


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLCAVCGDN 9
GLC CG N
Sbjct: 11 GLCYNCGGN 19


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CAVCGD 8
C++CGD
Sbjct: 408 CSICGD 413


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CAVCGDN 9
C +CG+N
Sbjct: 263 CPICGEN 269


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CAVCGDN 9
C +CG+N
Sbjct: 263 CPICGEN 269


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CAVCGDN 9
C +CG+N
Sbjct: 263 CPICGEN 269


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CAVCGDN 9
C +CG+N
Sbjct: 263 CPICGEN 269


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CAVCGDN 9
C +CG+N
Sbjct: 263 CPICGEN 269


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CAVCGDN 9
C +CG+N
Sbjct: 263 CPICGEN 269


>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 GLCAVCGDNA 10
G C VCG A
Sbjct: 457 GACIVCGGRA 466


>sp|ENO_METTH|ENOLASE thermautotrophicus (strain ATCC 29096

Query: 3 CAVCGDN 9
C +CGD+
Sbjct: 303 CMICGDD 309


>sp|TFE_PYRCJ|TRANSCRIPTION factor E|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GLCAVCGDN 9
G+C +CG +
Sbjct: 139 GVCPICGSH 147


>sp|YTF2_SACSH|TFIIB-TYPE zinc finger protein|Saccharolobus shibatae (strain ATCC 51178

Query: 3 CAVCGDN 9
C VCG N
Sbjct: 3 CPVCGSN 9


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GLCAVCGDNA 10
G C CG++A
Sbjct: 148 GTCPYCGEHA 157


>sp|Y531_METTH|UNCHARACTERIZED protein MTH_531|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GLCAVCGDN 9
G+ A+CGD+
Sbjct: 227 GVLALCGDD 235


>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 3 CAVCGDN 9
C +CGD+
Sbjct: 303 CLICGDD 309


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 GLCAVCGDNA 10
G+C CG A
Sbjct: 142 GICPYCGKQA 151


Query: 2 LCAVCGDNA 10
+C +CG A
Sbjct: 173 VCKICGTKA 181


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GLCAVCGDNA 10
G C CG+ A
Sbjct: 148 GTCPYCGEQA 157


>sp|PUS10_VULDI|TRNA pseudouridine synthase Pus10|Vulcanisaeta distributa (strain DSM

Query: 3 CAVCGD 8
C VCGD
Sbjct: 92 CYVCGD 97


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 CAVCG 7
CAVCG
Sbjct: 173 CAVCG 177


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 CAVCG 7
CAVCG
Sbjct: 173 CAVCG 177


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 CAVCG 7
CAVCG
Sbjct: 173 CAVCG 177


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GLCAVCGDNA 10
G C CG+ A
Sbjct: 147 GTCPYCGEKA 156


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 3 CAVCGDN 9
C +CGD+
Sbjct: 291 CLICGDD 297


>sp|THIC_THEKO|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 CAVCGD 8
C++CGD
Sbjct: 407 CSMCGD 412


>sp|THIC_THEGJ|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 CAVCGD 8
C++CGD
Sbjct: 407 CSMCGD 412


>sp|THIC_PYRFU|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CAVCGD 8
C++CGD
Sbjct: 407 CSMCGD 412


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 CAVCGD 8
C++CGD
Sbjct: 407 CSMCGD 412


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CAVCGD 8
C++CGD
Sbjct: 406 CSMCGD 411


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CAVCGD 8
C +CGD
Sbjct: 547 CPICGD 552


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLCAVCGDNA 10
G+C CG A
Sbjct: 140 GICPYCGGEA 149


>sp|NOB1_ARCFU|ENDORIBONUCLEASE Nob1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LCAVCGDNA 10
+C VCG A
Sbjct: 144 ICPVCGSEA 152


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LCAVCGDNA 10
+CA CG A
Sbjct: 173 VCATCGTKA 181


Query: 1 GLCAVCGDNA 10
G C CG +A
Sbjct: 142 GTCPYCGKHA 151


>sp|ENO3_METHJ|ENOLASE 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 CAVCGDN 9
C +CGD+
Sbjct: 295 CLICGDD 301


>sp|SUI1_METMA|PROTEIN translation factor SUI1 homolog|Methanosarcina mazei (strain ATCC

Query: 1 GLCAVCG 7
G+C VCG
Sbjct: 4 GMCPVCG 10


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LCAVCGDNA 10
+C VCG A
Sbjct: 30 VCEVCGSKA 38


>sp|SYP_METKA|PROLINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 CAVCGDNA 10
C +CG+ A
Sbjct: 468 CPICGETA 475


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 2 LCAVCGDNA 10
+C+ CGD A
Sbjct: 550 ICSKCGDFA 558


>sp|SUI1_METBF|PROTEIN translation factor SUI1 homolog|Methanosarcina barkeri (strain

Query: 1 GLCAVCG 7
G+C VCG
Sbjct: 4 GMCPVCG 10


>sp|SUI1_METAC|PROTEIN translation factor SUI1 homolog|Methanosarcina acetivorans

Query: 1 GLCAVCG 7
G+C VCG
Sbjct: 4 GMCPVCG 10


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GLCAVCGDNA 10
+C VCG A
Sbjct: 172 AICKVCGGKA 181


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 GLCAVCG 7
LC VCG
Sbjct: 659 ALCPVCG 665


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 GLCAVCGDN 9
G+ VCGD+
Sbjct: 122 GMTIVCGDS 130


>sp|HEM1_METMJ|GLUTAMYL-TRNA reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 CAVCGD 8
CA CGD
Sbjct: 396 CAECGD 401


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 GLCAVCGD 8
G C VCG+
Sbjct: 448 GKCIVCGN 455


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 LCAVCGD 8
LC++CG+
Sbjct: 408 LCSMCGE 414


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LCAVCG 7
LC VCG
Sbjct: 9 LCPVCG 14


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 LCAVCG 7
LC VCG
Sbjct: 726 LCPVCG 731


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GLCAVCG 7
G C VCG
Sbjct: 453 GKCVVCG 459


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 CAVCGDNA 10
C VCG +A
Sbjct: 463 CPVCGRDA 470


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 CAVCGDNA 10
C +CG+ A
Sbjct: 174 CKICGNRA 181


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 CAVCGDNA 10
C VCG A
Sbjct: 184 CKVCGSKA 191


>sp|EF1A_METLZ|ELONGATION factor 1-alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LCAVCGDN 9
+ A CGDN
Sbjct: 184 ISAFCGDN 191


>sp|TFE_METMA|TRANSCRIPTION factor E|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LCAVCGDN 9
LC +CG++
Sbjct: 134 LCPMCGED 141


>sp|TFE_METBF|TRANSCRIPTION factor E|Methanosarcina barkeri (strain Fusaro /

Query: 2 LCAVCGDN 9
LC +CG++
Sbjct: 134 LCPMCGED 141


>sp|TFE_METAC|TRANSCRIPTION factor E|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LCAVCGDN 9
LC +CG++
Sbjct: 137 LCPMCGED 144


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 CAVCG 7
CA+CG
Sbjct: 178 CAICG 182


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 CAVCG 7
CA+CG
Sbjct: 173 CAICG 177


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 CAVCG 7
CA+CG
Sbjct: 173 CAICG 177


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 CAVCG 7
CA+CG
Sbjct: 173 CAICG 177


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 CAVCG 7
CA+CG
Sbjct: 173 CAICG 177


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 CAVCG 7
CA+CG
Sbjct: 186 CAICG 190


>sp|RL34_THEPD|LARGE ribosomal subunit protein eL34|Thermofilum pendens (strain DSM

Query: 3 CAVCG 7
CA+CG
Sbjct: 37 CAICG 41


>sp|RL34_STAMF|LARGE ribosomal subunit protein eL34|Staphylothermus marinus (strain

Query: 3 CAVCG 7
CA+CG
Sbjct: 37 CAICG 41


>sp|RL34_PYRHO|LARGE ribosomal subunit protein eL34|Pyrococcus horikoshii (strain ATCC

Query: 3 CAVCG 7
CA+CG
Sbjct: 36 CAICG 40


>sp|RL34_PYRAB|LARGE ribosomal subunit protein eL34|Pyrococcus abyssi (strain GE5 /

Query: 3 CAVCG 7
CA+CG
Sbjct: 36 CAICG 40


>sp|RL34_HYPBU|LARGE ribosomal subunit protein eL34|Hyperthermus butylicus (strain DSM

Query: 3 CAVCG 7
CA+CG
Sbjct: 37 CAICG 41


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GLCAVCGDNA 10
+C VCG A
Sbjct: 174 AVCKVCGTRA 183


Query: 1 GLCAVCG 7
G+C CG
Sbjct: 144 GICPYCG 150


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 2 LCAVCGDN 9
LC +CG++
Sbjct: 116 LCEMCGED 123


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 1 GLCAVCG 7
G C VCG
Sbjct: 438 GRCPVCG 444


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LCAVCGDNA 10
+C VCG A
Sbjct: 173 VCKVCGTRA 181


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 CAVCGD 8
C+VCG+
Sbjct: 408 CSVCGE 413


>sp|LEUC_HALLT|3-ISOPROPYLMALATE dehydratase large subunit|Halorubrum lacusprofundi (strain ATCC

Query: 1 GLCAVCGDN 9
G+ VCGD+
Sbjct: 122 GMTIVCGDS 130


>sp|TFE_PYRAR|TRANSCRIPTION factor E|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GLCAVCG 7
G C +CG
Sbjct: 139 GTCPICG 145


>sp|RAD50_PYRHO|DNA double-strand break repair Rad50|Pyrococcus horikoshii (strain ATCC

Query: 1 GLCAVCG 7
G C VCG
Sbjct: 439 GKCPVCG 445


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 1 GLCAVCG 7
G C VCG
Sbjct: 442 GKCPVCG 448


>sp|RAD50_PYRAB|DNA double-strand break repair Rad50|Pyrococcus abyssi (strain GE5 /

Query: 1 GLCAVCG 7
G C VCG
Sbjct: 440 GKCPVCG 446


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLCAVCG 7
G C VCG
Sbjct: 1135 GKCPVCG 1141


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 GLCAVCG 7
G C VCG
Sbjct: 1322 GKCPVCG 1328


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 CAVCGD 8
CA+CG+
Sbjct: 173 CALCGN 178


>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CAVCGD 8
C VCGD
Sbjct: 288 CKVCGD 293


>sp|KITH_THEKO|THYMIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GLCAVCGDNA 10
+C VCG A
Sbjct: 148 AVCTVCGKPA 157


>sp|RL34_METJA|LARGE ribosomal subunit protein eL34|Methanocaldococcus jannaschii

Query: 3 CAVCG 7
CA+CG
Sbjct: 37 CAICG 41


>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GLCAVCG 7
G C VCG
Sbjct: 461 GNCVVCG 467


>sp|PRIS_METTH|DNA primase small subunit PriS|Methanothermobacter thermautotrophicus

Query: 1 GLCAVCGDNA 10
G+C C D A
Sbjct: 112 GVCPTCLDEA 121


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 4 AVCGDNA 10
AVC DNA
Sbjct: 282 AVCVDNA 288


>sp|FPOO_METMA|F(420)H(2) dehydrogenase subunit O|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GLCAVCGDNA 10
GLC C D+A
Sbjct: 35 GLCETCLDSA 44


>sp|IF2B_METS3|TRANSLATION initiation factor 2 subunit|Methanobrevibacter smithii (strain ATCC

Query: 3 CAVCGDNA 10
CA CG A
Sbjct: 123 CAACGAKA 130


>sp|RL37_METKA|LARGE ribosomal subunit protein eL37|Methanopyrus kandleri (strain AV19

Query: 1 GLCAVCG 7
G CA CG
Sbjct: 33 GYCAACG 39


>sp|Y751_METJA|TNPB-LIKE protein MJ0751|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LCAVCG 7
LC +CG
Sbjct: 221 LCPICG 226


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLCAVC 6
GLC +C
Sbjct: 34 GLCPIC 39


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GLCAVCG 7
G C VCG
Sbjct: 444 GKCIVCG 450


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GLCAVCGDNA 10
G C CG+ A
Sbjct: 149 GACPHCGETA 158


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GLCAVCGDNA 10
G C CG+ A
Sbjct: 149 GACPHCGETA 158


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 2 LCAVCGDN 9
C VCG++
Sbjct: 564 FCPVCGES 571


Query: 2 LCAVCGDNA 10
+CA CG+ A
Sbjct: 546 VCAKCGEIA 554


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLCAVC 6
GLC VC
Sbjct: 40 GLCYVC 45


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLCAVCG 7
G C VCG
Sbjct: 146 GRCDVCG 152


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 GLCAVCGDN 9
G C CG N
Sbjct: 1069 GKCPKCGSN 1077


>sp|AROA_HALWD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GLCAVCGDNA 10
GLC + GD +
Sbjct: 106 GLCVLTGDES 115


>sp|SUI1_METHJ|PROTEIN translation factor SUI1 homolog|Methanospirillum hungatei JF-1

Query: 1 GLCAVCG 7
G+C++CG
Sbjct: 4 GICSICG 10


>sp|KPTA2_ARCFU|PROBABLE RNA 2'-phosphotransferase 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 GLCAVCGD 8
G+C CG+
Sbjct: 4 GICKRCGE 11


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GLCAVCGDN 9
G C CG N
Sbjct: 1080 GACPKCGGN 1088


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 GLCAVCGDN 9
G C CG N
Sbjct: 1074 GACPKCGGN 1082


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 GLCAVCGDN 9
G C CG N
Sbjct: 1073 GACPKCGGN 1081


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CAVCGDNA 10
C +CG A
Sbjct: 170 CKICGSKA 177


Query: 1 GLCAVCG 7
G+C CG
Sbjct: 138 GICPYCG 144


>sp|NADE_METB6|NH(3)-DEPENDENT NAD(+) synthetase|Methanoregula boonei (strain DSM 21154

Query: 1 GLCAVCGDNA 10
G C GDNA
Sbjct: 143 GYCTKYGDNA 152


>sp|APGM_METLZ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanocorpusculum labreanum (strain ATCC

Query: 2 LCAVCGDNA 10
+ AVCGD++
Sbjct: 334 MIAVCGDHS 342


>sp|TF2B_METMP|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain DSM 14266

Query: 2 LCAVCGDNA 10
+C VCG +
Sbjct: 42 ICPVCGSKS 50


>sp|TF2B_METM5|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C5 /

Query: 2 LCAVCGDNA 10
+C VCG +
Sbjct: 42 ICPVCGSKS 50


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GLCAVCG 7
G C VCG
Sbjct: 459 GPCIVCG 465


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GLCAVCGDNA 10
G C CG +A
Sbjct: 165 GTCPYCGAHA 174


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 1 GLCAVCG 7
G+CA CG
Sbjct: 13 GVCARCG 19


>sp|NOP10_PYRFU|RIBOSOME biogenesis protein Nop10|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LCAVCGD 8
+C VCG+
Sbjct: 19 VCPVCGE 25


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 1 GLCAVCG 7
G CA CG
Sbjct: 595 GACAGCG 601


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GLCAVCG 7
G C +CG
Sbjct: 455 GKCPICG 461


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GLCAVCG 7
G C +CG
Sbjct: 1300 GKCPICG 1306


>sp|YI48_METSM|INSERTION element ISM1 uncharacterized 48.3|Methanobrevibacter smithii

Query: 2 LCAVCGDN 9
+C VCG +
Sbjct: 65 ICPVCGSH 72


>sp|RL37_THEKO|LARGE ribosomal subunit protein eL37|Thermococcus kodakarensis (strain

Query: 1 GLCAVCG 7
G CA CG
Sbjct: 33 GYCAACG 39


>sp|APGM_META3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus aeolicus (strain ATCC

Query: 1 GLCAVCGDN 9
GLC + G+N
Sbjct: 381 GLCWIKGEN 389


>sp|RL37_THEGJ|LARGE ribosomal subunit protein eL37|Thermococcus gammatolerans (strain

Query: 1 GLCAVCG 7
G CA CG
Sbjct: 33 GYCAACG 39


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 GLCAVCGDN 9
G C CG N
Sbjct: 142 GTCPYCGFN 150


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GLCAVCGDN 9
G C CG N
Sbjct: 1177 GKCPKCGGN 1185


>sp|THIC2_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LCAVCGD 8
+C++CG+
Sbjct: 407 MCSMCGE 413


>sp|TFS_METJA|TRANSCRIPTION factor S|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CAVCG 7
CAVCG
Sbjct: 21 CAVCG 25


>sp|RL37_THEON|LARGE ribosomal subunit protein eL37|Thermococcus onnurineus (strain

Query: 1 GLCAVCG 7
G CA CG
Sbjct: 33 GYCASCG 39




54|Sequence|266|275|CGDNAACQHY

>sp|RNP3_METKA|RIBONUCLEASE P protein component 3|Methanopyrus kandleri (strain AV19 /

Query: 4 NAACQH 9
NAAC+H
Sbjct: 228 NAACKH 233


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CGDNAACQ 8
CG N AC+
Sbjct: 209 CGINVACE 216


>sp|TDH_THEON|L-THREONINE 3-dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 CGDNAACQH 9
CG AC+H
Sbjct: 97 CGKCYACKH 105


>sp|TDH_THEKO|L-THREONINE 3-dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 CGDNAACQH 9
CG AC+H
Sbjct: 97 CGKCYACKH 105


>sp|RS8E_METBU|SMALL ribosomal subunit protein eS8|Methanococcoides burtonii (strain

Query: 3 DNAACQHY 10
DNAA HY
Sbjct: 81 DNAANAHY 88


>sp|QUEC_METTP|7-CYANO-7-DEAZAGUANINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 CGDNAACQH 9
CG +CQH
Sbjct: 198 CGTCESCQH 206


>sp|QUEC_METKA|7-CYANO-7-DEAZAGUANINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 CGDNAACQH 9
CG+ AC H
Sbjct: 203 CGECEACYH 211


>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GDNAACQHY 10
GD C HY
Sbjct: 169 GDEENCIHY 177


>sp|GSA_METS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GDNAAC 7
GDN AC
Sbjct: 189 GDNIAC 194


>sp|Y836_METJA|UNCHARACTERIZED protein MJ0836|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CGDNAACQHY 10
CG N C++Y
Sbjct: 16 CGANRNCEYY 25




55|Sequence|271|280|ACQHYGVRTC

>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 ACQHYGVR 8
A +HYGVR
Sbjct: 215 AIEHYGVR 222


>sp|QUEC_METBU|7-CYANO-7-DEAZAGUANINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 CQHYGV 7
C+HYG+
Sbjct: 50 CEHYGI 55


>sp|QUEC_METAC|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CQHYGV 7
C+HYG+
Sbjct: 50 CEHYGI 55


>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei

Query: 1 ACQHYGVRT 9
AC+ GVRT
Sbjct: 20 ACEELGVRT 28


>sp|COFD_METHJ|2-PHOSPHO-L-LACTATE transferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CQHYGVRT 9
C H+GV T
Sbjct: 118 CSHFGVST 125


>sp|UREG_NATPD|UREASE accessory protein UreG|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ACQHYGVR 8
AC H G+R
Sbjct: 73 ACPHTGIR 80


>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ACQHYGVR 8
AC H G+R
Sbjct: 73 ACPHTGIR 80


>sp|UREG_HALMA|UREASE accessory protein UreG|Haloarcula marismortui (strain ATCC 43049

Query: 1 ACQHYGVR 8
AC H G+R
Sbjct: 75 ACPHTGIR 82


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 2 CQHYGVR 8
C HY VR
Sbjct: 800 CWHYAVR 806


>sp|ARLMC_PYRFU|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus furiosus

Query: 2 CQHYG 6
C+HYG
Sbjct: 61 CRHYG 65


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 2 CQHYGVR 8
C+H G+R
Sbjct: 119 CEHCGIR 125


>sp|PELO_METKA|PROTEIN pelota homolog|Methanopyrus kandleri (strain AV19 /

Query: 5 YGVRTC 10
YGVR C
Sbjct: 274 YGVREC 279


>sp|QUEC_METMA|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CQHYGV 7
C+H+G+
Sbjct: 50 CEHFGI 55


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 ACQHYGV 7
A QHYG+
Sbjct: 221 AYQHYGI 227


>sp|Y1348_METJA|UNCHARACTERIZED protein MJ1348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CQHYGVR 8
C +YG+R
Sbjct: 56 CDYYGLR 62




56|Sequence|276|285|GVRTCEGCKG

>sp|NOB1_METJA|ENDORIBONUCLEASE Nob1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RTCEGCK 9
+ CEGCK
Sbjct: 156 KICEGCK 162


>sp|Y804_METJA|UNCHARACTERIZED protein MJ0804|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VRTCEGCKG 10
VR C GC+G
Sbjct: 22 VRHCIGCEG 30


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 5 CEGCKG 10
CEGC G
Sbjct: 354 CEGCDG 359


>sp|SYW1_HALSA|TRYPTOPHAN--TRNA ligase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GVRTCEGCK 9
G R C GCK
Sbjct: 468 GDRLCGGCK 476


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM 22066

Query: 4 TCEGCK 9
TC GCK
Sbjct: 294 TCPGCK 299


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 5 CEGCKG 10
CEGC G
Sbjct: 147 CEGCNG 152


>sp|UDGA_SACS2|TYPE-4 uracil-DNA glycosylase|Saccharolobus solfataricus (strain ATCC

Query: 2 VRTCEGCK 9
VR C+ CK
Sbjct: 11 VRKCQKCK 18


>sp|ASPG_PYRFU|L-ASPARAGINASE furiosus (strain ATCC 43587

Query: 1 GVRTCEGC 8
G++ CE C
Sbjct: 35 GIKDCEDC 42


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GVRTCEGCK 9
G R C CK
Sbjct: 449 GTRMCGSCK 457


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 VRTCEG 7
VRTC+G
Sbjct: 218 VRTCDG 223


>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 5 CEGCKG 10
CEGC G
Sbjct: 152 CEGCIG 157


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 2 VRTCEG 7
VRTC+G
Sbjct: 218 VRTCDG 223


>sp|SYW_METAC|TRYPTOPHAN--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GVRTCEGCK 9
G R C CK
Sbjct: 395 GTRMCGSCK 403


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 3 RTCEGCK 9
R CE CK
Sbjct: 385 RICEECK 391


>sp|SPSS2_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanoregula boonei (strain DSM 21154

Query: 1 GVRTCEGCK 9
G TC+ C+
Sbjct: 103 GYSTCDACR 111


>sp|MTNA_PYRHO|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus horikoshii

Query: 2 VRTCEGCK 9
V TC GC+
Sbjct: 304 VLTCGGCR 311


>sp|MTNA_PYRFU|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus furiosus (strain

Query: 2 VRTCEGCK 9
V TC GC+
Sbjct: 304 VLTCGGCR 311


>sp|MTNA_PYRAB|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus abyssi (strain

Query: 2 VRTCEGCK 9
V TC GC+
Sbjct: 304 VLTCGGCR 311


>sp|SPSS1_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 GVRTCEGCK 9
G TC+ C+
Sbjct: 109 GYSTCDNCR 117


>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GVRTCEGCKG 10
G RTC+ C G
Sbjct: 161 GTRTCQTCGG 170


>sp|NOB1_METTH|ENDORIBONUCLEASE Nob1|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 RTCEGCK 9
R C GC+
Sbjct: 139 RVCTGCR 145


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VRTCEGCKG 10
VRTC C G
Sbjct: 175 VRTCPQCNG 183


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 2 VRTCEGCKG 10
VRTC C G
Sbjct: 179 VRTCPQCDG 187


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 2 VRTCEGCKG 10
VRTC C G
Sbjct: 179 VRTCPQCDG 187


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 3 RTCEGCKG 10
R C C+G
Sbjct: 212 RRCSNCRG 219


>sp|KAD_HALSA|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GVRTCEGC 8
G R CE C
Sbjct: 125 GRRVCEDC 132


>sp|KAD_HALS3|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GVRTCEGC 8
G R CE C
Sbjct: 125 GRRVCEDC 132




57|Sequence|281|290|EGCKGFFKRT

>sp|T1S1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 1 EGCKGFFKR 9
+GCKG F++
Sbjct: 322 QGCKGLFQK 330


>sp|TRM5B_METJA|TRNA (guanine(37)-N(1))-methyltransferase Trm5b|Methanocaldococcus

Query: 3 CKGFFKR 9
CKG F+R
Sbjct: 130 CKGVFRR 136


>sp|DTDA_THEAC|D-AMINOACYL-TRNA deacylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GCKGF 6
GCKGF
Sbjct: 223 GCKGF 227


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GCKGFFK 8
GCKGF K
Sbjct: 699 GCKGFPK 705




58|Sequence|286|295|FFKRTVQKNA

>sp|TRPC_SULTO|INDOLE-3-GLYCEROL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FFKRTVQKNA 10
F K T+ KNA
Sbjct: 36 FIKSTIDKNA 45


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 FKRTVQKN 9
FK T++KN
Sbjct: 78 FKETLEKN 85




59|Sequence|291|300|VQKNAKYVCL

>sp|RL22_METMJ|LARGE ribosomal subunit protein uL22|Methanoculleus marisnigri (strain

Query: 1 VQKNAKYVCL 10
V+KNA+Y+ L
Sbjct: 97 VEKNAEYIGL 106


>sp|FRHA_METTH|COENZYME F420 hydrogenase subunit alpha|Methanothermobacter

Query: 1 VQKNAKYV 8
++KNA+YV
Sbjct: 133 IRKNAQYV 140


>sp|RL37A_PICTO|LARGE ribosomal subunit protein eL43|Picrophilus torridus (strain ATCC

Query: 1 VQKNAKYVC 9
VQK A YVC
Sbjct: 31 VQKKAYYVC 39


>sp|PGP_METS3|PHOSPHOGLYCOLATE phosphatase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VQKNAKYVC 9
++KN+ YVC
Sbjct: 209 LKKNSDYVC 217


>sp|PURQ_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 KNAKYVC 9
+NAK++C
Sbjct: 111 ENAKFIC 117


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VQKNAKYVC 9
+QK YVC
Sbjct: 187 IQKGHAYVC 195


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 QKNAKYVCL 10
+ NAKYV L
Sbjct: 176 RSNAKYVAL 184


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QKNAKYVCL 10
+K+ KY+C+
Sbjct: 553 KKSTKYICI 561


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VQKNAKYVC 9
+QK+ KY C
Sbjct: 527 IQKSDKYPC 535


>sp|RS7_METTH|SMALL ribosomal subunit protein uS7|Methanothermobacter

Query: 5 AKYVCL 10
AKY+CL
Sbjct: 21 AKYICL 26




60|Sequence|296|305|KYVCLANKNC

>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 KYVCLANKNC 10
KY C +N NC
Sbjct: 11 KYQCDSNGNC 20


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 1 KYVCLANKNC 10
+YVCL +C
Sbjct: 110 EYVCLMQVHC 119


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 3 VCLANKNC 10
VCLA + C
Sbjct: 350 VCLAARRC 357


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 4 CLANKNC 10
CL NK C
Sbjct: 249 CLENKKC 255


>sp|Y836_METJA|UNCHARACTERIZED protein MJ0836|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VCLANKNC 10
VC AN+NC
Sbjct: 15 VCGANRNC 22


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VCLANKN 9
+C+ANK+
Sbjct: 380 ICIANKD 386


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 1 KYVCLA 6
KY+C+A
Sbjct: 367 KYICIA 372


>sp|Y314_METJA|UNCHARACTERIZED protein MJ0314|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KYVCLANKN 9
KYV +AN N
Sbjct: 222 KYVSIANTN 230




61|Sequence|301|310|ANKNCPVDKR

>sp|Y818_METJA|UNCHARACTERIZED protein MJ0818|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKNCPVDKR 10
+KNCP KR
Sbjct: 164 SKNCPYGKR 172


>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 4 NCPVD 8
NCPVD
Sbjct: 114 NCPVD 118


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NCPVD 8
NCP+D
Sbjct: 24 NCPID 28


>sp|RFRNP_METJA|RNA-FREE ribonuclease P|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKNCPVD 8
N+NCP D
Sbjct: 70 NENCPRD 76


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 3 KNCPVDK 9
+NC +DK
Sbjct: 601 RNCSIDK 607


>sp|Y2204_ARCFU|UNCHARACTERIZED protein AF_2204|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NKNCP 6
N+NCP
Sbjct: 65 NRNCP 69


>sp|VHUB_METVO|POLYFERREDOXIN protein VhuB|Methanococcus voltae

Query: 1 ANKNCPVD 8
+NCPVD
Sbjct: 235 CEQNCPVD 242


>sp|DMSB_HALSA|PUTATIVE dimethyl sulfoxide reductase iron-sulfur|Halobacterium salinarum

Query: 4 NCPVDKR 10
NCP D R
Sbjct: 165 NCPADAR 171




62|Sequence|306|315|PVDKRRRNRC

>sp|PELO_PYRAR|PROTEIN pelota homolog|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VDKRRR 7
VDKRRR
Sbjct: 5 VDKRRR 10




63|Sequence|311|320|RRNRCQYCRF

>sp|COFG_ARCFU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RNRCQYCRF 10
RNRC YC F
Sbjct: 19 RNRCDYCGF 27


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RNRCQYCRF 10
RNRC YC F
Sbjct: 16 RNRCGYCGF 24


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RNRCQYCRF 10
RNRC YC F
Sbjct: 10 RNRCGYCGF 18


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 RNRCQYCRF 10
RNRC YC F
Sbjct: 16 RNRCGYCTF 24


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 2 RNRCQYCRF 10
RNRC YC F
Sbjct: 21 RNRCGYCSF 29


>sp|COFG_METKA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 RNRCQYCRF 10
RNRC YC F
Sbjct: 17 RNRCAYCTF 25


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 RRNRCQYC 8
RR+RC YC
Sbjct: 20 RRSRCPYC 27


>sp|COFG_METJA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RNRCQYCRF 10
RN+C YC F
Sbjct: 50 RNKCGYCIF 58


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RNRCQYCRF 10
RN+C YC F
Sbjct: 16 RNQCGYCGF 24


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 3 NRCQYCRF 10
NRC++C F
Sbjct: 72 NRCRFCAF 79


>sp|COFG_METMJ|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RNRCQYCRF 10
+NRC YC F
Sbjct: 21 QNRCGYCCF 29


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 RNRCQYCRF 10
RN C YC F
Sbjct: 20 RNLCGYCTF 28


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 RNRCQYCRF 10
RN C YC F
Sbjct: 28 RNVCGYCTF 36


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 2 RNRCQYCRF 10
RN C YC F
Sbjct: 50 RNVCGYCTF 58


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 2 RNRCQYCRF 10
RN C YC F
Sbjct: 50 RNVCGYCTF 58


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 2 RNRCQYCRF 10
RN C YC F
Sbjct: 50 RNVCGYCTF 58


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 RRNRCQYC 8
RR+RC +C
Sbjct: 142 RRDRCPHC 149


>sp|COFG_METVS|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 RNRCQYCRF 10
RN C YC F
Sbjct: 50 RNICGYCTF 58


>sp|COFG_METTP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RNRCQYCRF 10
RN C YC F
Sbjct: 32 RNACGYCSF 40


>sp|PYRI_METLZ|ASPARTATE carbamoyltransferase regulatory chain|Methanocorpusculum labreanum

Query: 1 RRNRCQYC 8
R RCQYC
Sbjct: 134 RGFRCQYC 141


>sp|PYRI_HALSA|ASPARTATE carbamoyltransferase regulatory chain|Halobacterium salinarum

Query: 4 RCQYC 8
RCQYC
Sbjct: 135 RCQYC 139


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 RNRCQYCRF 10
+N C YC F
Sbjct: 28 KNDCGYCNF 36


>sp|COFG_METPE|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 RNRCQYCRF 10
+N C YC F
Sbjct: 21 QNHCGYCSF 29


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 1 RRNRCQY 7
R NRC+Y
Sbjct: 113 RNNRCRY 119


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 RRNRCQYC 8
RR++C +C
Sbjct: 142 RRDKCPHC 149


>sp|F16PA_METHJ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 NRCQYC 8
+RC+YC
Sbjct: 101 SRCEYC 106


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RNRCQYCRF 10
+N C YC F
Sbjct: 55 KNICGYCTF 63


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 2 RNRCQYC 8
R+RC YC
Sbjct: 337 RSRCTYC 343


>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 5 CQYCRF 10
C+YC+F
Sbjct: 40 CRYCQF 45


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 1 RRNRCQYCR 9
R++RC CR
Sbjct: 20 RQDRCIRCR 28


>sp|PYRI_METAR|ASPARTATE carbamoyltransferase regulatory chain|Methanocella arvoryzae

Query: 4 RCQYCRF 10
RC YC +
Sbjct: 139 RCSYCEY 145


>sp|PYRI_SULAC|ASPARTATE carbamoyltransferase regulatory chain|Sulfolobus acidocaldarius

Query: 4 RCQYC 8
RC+YC
Sbjct: 141 RCEYC 145


>sp|PYRI_METMP|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 4 RCQYC 8
RC+YC
Sbjct: 133 RCEYC 137


>sp|PYRI_METM7|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 4 RCQYC 8
RC+YC
Sbjct: 133 RCEYC 137


>sp|PYRI_METM6|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 4 RCQYC 8
RC+YC
Sbjct: 133 RCEYC 137


>sp|PYRI_METM5|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 4 RCQYC 8
RC+YC
Sbjct: 133 RCEYC 137


>sp|PYRI_HALMA|ASPARTATE carbamoyltransferase regulatory chain|Haloarcula marismortui

Query: 4 RCQYC 8
RC+YC
Sbjct: 136 RCEYC 140


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 4 RCQYCR 9
RC YCR
Sbjct: 376 RCPYCR 381


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RNRCQYCRF 10
R RC YC +
Sbjct: 205 RYRCSYCGY 213


>sp|COFH_ARCFU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Archaeoglobus fulgidus (strain ATCC

Query: 3 NRCQYCRF 10
N C++C F
Sbjct: 55 NDCKFCSF 62


>sp|Y979_METVS|UPF0179 protein Mevan_0979|Methanococcus vannielii (strain ATCC 35089

Query: 3 NRCQYCRF 10
N C+ CRF
Sbjct: 25 NECESCRF 32


>sp|ARADH_SACS2|D-ARABINOSE 1-dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 5 CQYCR 9
C+YCR
Sbjct: 102 CRYCR 106


>sp|NRDR_NATPD|TRANSCRIPTIONAL repressor NrdR|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RRNRCQYCRF 10
RR CQ C F
Sbjct: 27 RRRECQRCSF 36


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 NRCQYCR 9
NRC CR
Sbjct: 426 NRCVICR 432


>sp|Y1632_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 4 RCQYCRF 10
+C+YC F
Sbjct: 48 KCKYCFF 54


>sp|PYRI_STAMF|ASPARTATE carbamoyltransferase regulatory chain|Staphylothermus marinus

Query: 5 CQYCRF 10
CQYC +
Sbjct: 146 CQYCGY 151


>sp|PYRI_THEON|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus onnurineus

Query: 4 RCQYC 8
RC YC
Sbjct: 134 RCHYC 138


>sp|PYRI_THEKO|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus kodakarensis

Query: 4 RCQYC 8
RC YC
Sbjct: 135 RCHYC 139


>sp|PYRI_THEGJ|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus gammatolerans

Query: 4 RCQYC 8
RC YC
Sbjct: 134 RCHYC 138


>sp|PYRI_PYRHO|ASPARTATE carbamoyltransferase regulatory chain|Pyrococcus horikoshii (strain

Query: 4 RCQYC 8
RC YC
Sbjct: 135 RCHYC 139


>sp|PYRI_PYRFU|ASPARTATE carbamoyltransferase regulatory chain|Pyrococcus furiosus (strain

Query: 4 RCQYC 8
RC YC
Sbjct: 135 RCHYC 139


>sp|PYRI_PYRAB|ASPARTATE carbamoyltransferase regulatory chain|Pyrococcus abyssi (strain GE5

Query: 4 RCQYC 8
RC YC
Sbjct: 135 RCHYC 139


>sp|PYRI_METS3|ASPARTATE carbamoyltransferase regulatory chain|Methanobrevibacter smithii

Query: 4 RCQYC 8
RC YC
Sbjct: 141 RCHYC 145


>sp|PYRI_ARCFU|ASPARTATE carbamoyltransferase regulatory chain|Archaeoglobus fulgidus

Query: 4 RCQYC 8
RC YC
Sbjct: 137 RCHYC 141


>sp|ACAR_METS5|ACRYLOYL-COENZYME A reductase|Metallosphaera sedula (strain ATCC 51363

Query: 5 CQYCR 9
C YCR
Sbjct: 93 CHYCR 97


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RNRCQYC 8
+ RC YC
Sbjct: 715 KRRCPYC 721


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 5 CQYCRF 10
C+YC F
Sbjct: 19 CKYCYF 24


>sp|NRDR_HALLT|TRANSCRIPTIONAL repressor NrdR|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 RRNRCQYCRF 10
RR CQ C F
Sbjct: 27 RRRECQRCSF 36


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 1 RRNRCQYCR 9
R C+YC+
Sbjct: 348 RLTHCEYCK 356


>sp|NRDR_HALMD|TRANSCRIPTIONAL repressor NrdR|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 RRNRCQYCRF 10
RR CQ C F
Sbjct: 27 RRRECQRCSF 36


>sp|PYRI_NATPD|ASPARTATE carbamoyltransferase regulatory chain|Natronomonas pharaonis

Query: 4 RCQYC 8
RC YC
Sbjct: 134 RCSYC 138


>sp|PYRI_METBU|ASPARTATE carbamoyltransferase regulatory chain|Methanococcoides burtonii

Query: 4 RCQYC 8
RC YC
Sbjct: 142 RCSYC 146


>sp|PYRI_CALMQ|ASPARTATE carbamoyltransferase regulatory chain|Caldivirga maquilingensis

Query: 4 RCQYC 8
+CQYC
Sbjct: 142 QCQYC 146


>sp|CIMA_METMA|PUTATIVE (R)-citramalate synthase CimA|Methanosarcina mazei (strain ATCC

Query: 5 CQYCR 9
C YCR
Sbjct: 60 CSYCR 64


>sp|CIMA_METAC|PUTATIVE (R)-citramalate synthase CimA|Methanosarcina acetivorans (strain

Query: 5 CQYCR 9
C YCR
Sbjct: 60 CSYCR 64


>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 5 CQYCR 9
C YCR
Sbjct: 115 CDYCR 119


>sp|PYRI_METVS|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus vannielii

Query: 4 RCQYC 8
RC YC
Sbjct: 133 RCDYC 137


>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 RNRCQYC 8
+ RC YC
Sbjct: 517 KERCVYC 523


>sp|RPO3_METST|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosphaera stadtmanae (strain

Query: 5 CQYCR 9
CQ+CR
Sbjct: 86 CQHCR 90


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RRNRCQYC 8
+ N C YC
Sbjct: 668 KSNTCPYC 675


>sp|PYRI_METPE|ASPARTATE carbamoyltransferase regulatory chain|Methanosphaerula palustris

Query: 4 RCQYC 8
RC YC
Sbjct: 138 RCHYC 142


>sp|PYRI_METKA|ASPARTATE carbamoyltransferase regulatory chain|Methanopyrus kandleri (strain

Query: 4 RCQYC 8
RC+YC
Sbjct: 136 RCRYC 140


>sp|PYLS_METAC|PYRROLYSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RNRCQYCR 9
R C++CR
Sbjct: 66 RKTCRHCR 73


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 RCQYCRF 10
RC YC +
Sbjct: 142 RCPYCGY 148


>sp|FER2_THEAC|PROBABLE ferredoxin TA0517|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RNRCQYC 8
RN C YC
Sbjct: 14 RNLCNYC 20


>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RNRCQYCRF 10
+N+C +C +
Sbjct: 72 KNQCSFCYY 80


>sp|RPO12_PYRNV|DNA-DIRECTED RNA polymerase subunit Rpo12|Pyrobaculum neutrophilum (strain DSM

Query: 4 RCQYCRF 10
RC YC F
Sbjct: 29 RCPYCNF 35


>sp|RPO12_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo12|Pyrobaculum calidifontis (strain DSM

Query: 4 RCQYCRF 10
RC YC F
Sbjct: 29 RCPYCNF 35


>sp|RPO12_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo12|Pyrobaculum aerophilum (strain ATCC

Query: 4 RCQYCRF 10
RC YC F
Sbjct: 29 RCPYCNF 35


>sp|RPO12_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo12|Pyrobaculum arsenaticum (strain DSM

Query: 4 RCQYCRF 10
RC YC F
Sbjct: 29 RCPYCNF 35




64|Sequence|316|325|QYCRFQKCLA

>sp|DCD_STAMF|DCTP deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 1 QYCRFQK 7
Q+CRF+K
Sbjct: 39 QFCRFKK 45


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YCRFQK 7
YCRF++
Sbjct: 196 YCRFEE 201




65|Sequence|321|330|QKCLAVGMVK

>sp|LADH_METJA|LACTALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QKCLAVGMV 9
Q C++VGM+
Sbjct: 272 QVCISVGMI 280


>sp|PRNK_PYRFU|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PF0112|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CLAVGMVK 10
CL VG++K
Sbjct: 301 CLGVGIIK 308


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 1 QKCLAVGMV 9
Q C+ +GMV
Sbjct: 26 QPCVNIGMV 34


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain

Query: 1 QKCLAVGMV 9
Q C+ +GMV
Sbjct: 38 QPCVNIGMV 46




66|Sequence|326|335|VGMVKEVVRT

>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GMVKEVVR 9
G+V+EVVR
Sbjct: 953 GLVREVVR 960


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 MVKEVVRT 10
+VKEV++T
Sbjct: 59 LVKEVIKT 66


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 GMVKEVVR 9
GMV+EV++
Sbjct: 266 GMVREVIK 273




67|Sequence|331|340|EVVRTDSLKG

>sp|COFD_METKA|2-PHOSPHO-L-LACTATE transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 EVVRTDSL 8
EVVRTD+L
Sbjct: 280 EVVRTDTL 287


>sp|AROK_PYRAB|SHIKIMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 EVVRTDSLKG 10
E V T+SLKG
Sbjct: 176 ETVLTESLKG 185


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VVRTDSLKG 10
++RT S+KG
Sbjct: 392 IIRTGSVKG 400


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 EVVRTDSLKG 10
EV TD+LKG
Sbjct: 813 EVGTTDTLKG 822


>sp|Y714_METJA|UNCHARACTERIZED protein MJ0714|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EVVRTDSLKG 10
E+ RTD +KG
Sbjct: 12 ELNRTDGVKG 21




68|Sequence|336|345|DSLKGRRGRL

>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC

Query: 1 DSLKGRRGR 9
D+L+G RGR
Sbjct: 15 DALEGERGR 23


>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain

Query: 1 DSLKGRRGR 9
+SL+G++GR
Sbjct: 17 ESLRGKKGR 25


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LKGRRGRL 10
++GRRGR+
Sbjct: 645 IQGRRGRV 652


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 3 LKGRRGRL 10
++GRRGR+
Sbjct: 645 IQGRRGRV 652


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 3 LKGRRGRL 10
++GRRGR+
Sbjct: 644 IQGRRGRV 651


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 LKGRRGRL 10
++GRRGR+
Sbjct: 644 VQGRRGRV 651


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 3 LKGRRGRL 10
++GRRGR+
Sbjct: 644 VQGRRGRV 651


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LKGRRGRL 10
+ GRRGR+
Sbjct: 431 MSGRRGRM 438


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 3 LKGRRGR 9
LKG+RG+
Sbjct: 19 LKGKRGK 25


>sp|DPCKG_THEAC|GTP-DEPENDENT dephospho-CoA kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LKGRRGRL 10
+KGR GR+
Sbjct: 9 IKGRNGRV 16




69|Sequence|341|350|RRGRLPSKPK

>sp|AROK_THEAC|SHIKIMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RRGRLPSKP 9
RRGRLP P
Sbjct: 144 RRGRLPEMP 152


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 1 RRGRLPSKP 9
RRG LP KP
Sbjct: 261 RRGFLPDKP 269


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 2 RGRLPSKP 9
RG++P KP
Sbjct: 193 RGKIPQKP 200


>sp|SYTC_AERPE|THREONINE--TRNA ligase catalytic subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 RRGRLP 6
RRGR+P
Sbjct: 328 RRGRMP 333


>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RRGRLPSKP 9
R RLP KP
Sbjct: 385 RLARLPGKP 393


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RGRLPSKP 9
RG LPS P
Sbjct: 399 RGELPSAP 406


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RGRLPSKPK 10
RGR+ +KP+
Sbjct: 380 RGRVEAKPE 388




70|Sequence|346|355|PSKPKSPQEP

>sp|SYFA_SACS2|PHENYLALANINE--TRNA ligase alpha subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SKPKSPQE 9
S+PK+PQ+
Sbjct: 320 SRPKAPQK 327


>sp|ENDA_SULAC|TRNA-SPLICING endonuclease|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SKPKSPQE 9
+KPKSP++
Sbjct: 35 TKPKSPED 42


>sp|RL13_AERPE|LARGE ribosomal subunit protein uL13|Aeropyrum pernix (strain ATCC

Query: 1 PSKPKSPQ 8
P +P++PQ
Sbjct: 75 PKRPRTPQ 82


>sp|ENDA_SACI6|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SKPKSPQE 9
SKPK P++
Sbjct: 35 SKPKGPKD 42


>sp|ENDA_SACI4|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SKPKSPQE 9
SKPK P++
Sbjct: 35 SKPKGPKD 42


>sp|ENDA_SACI3|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.16.27)

Query: 2 SKPKSPQE 9
SKPK P++
Sbjct: 35 SKPKGPKD 42


>sp|ENDA_SACI7|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 SKPKSPQE 9
SKPK P++
Sbjct: 35 SKPKDPKD 42


>sp|ENDA_SACI2|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 SKPKSPQE 9
SKPK P++
Sbjct: 35 SKPKDPKD 42


>sp|ENDA_SACI1|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 SKPKSPQE 9
SKPK P++
Sbjct: 35 SKPKDPKD 42


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 1 PSKPKSPQE 9
P PKSP E
Sbjct: 168 PPVPKSPYE 176


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 1 PSKPKSPQE 9
P PKSP E
Sbjct: 168 PPVPKSPYE 176


>sp|ENDA_SACS2|TRNA-SPLICING endonuclease|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SKPKSPQE 9
SKPK P++
Sbjct: 35 SKPKGPKD 42


>sp|COMD_METJA|SULFOPYRUVATE decarboxylase subunit alpha|Methanocaldococcus jannaschii (strain

Query: 3 KPKSPQE 9
KPK+P+E
Sbjct: 129 KPKTPEE 135


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PSKPKSP 7
P+ PKSP
Sbjct: 34 PTTPKSP 40




71|Sequence|351|360|SPQEPSPPSP

>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SPQEPSPP 8
SP +PSPP
Sbjct: 504 SPTKPSPP 511


>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 EPSPPSP 10
EPS PSP
Sbjct: 189 EPSWPSP 195


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PQEPSPP 8
P+EP PP
Sbjct: 276 PREPLPP 282


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 2 PQEPSPP 8
P PSPP
Sbjct: 505 PTRPSPP 511


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PQEPSPP 8
P+EP PP
Sbjct: 276 PREPLPP 282


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SPQEPSPPSP 10
S + P PPSP
Sbjct: 38 SNENPRPPSP 47


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PQEPSPP 8
P+EP PP
Sbjct: 276 PREPLPP 282


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PQEPSPP 8
P PSPP
Sbjct: 505 PTSPSPP 511


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PQEPSPP 8
P+EP PP
Sbjct: 276 PREPLPP 282


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PQEPSPP 8
P PSPP
Sbjct: 510 PGRPSPP 516


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 5 PSPPSP 10
P+PPSP
Sbjct: 192 PAPPSP 197


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 PQEPSPP 8
P +PSPP
Sbjct: 515 PGDPSPP 521


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PQEPSPP 8
P PSPP
Sbjct: 509 PYRPSPP 515


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PQEPSPP 8
P PSPP
Sbjct: 510 PGRPSPP 516


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PQEPSPP 8
P PSPP
Sbjct: 510 PGRPSPP 516


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PQEPSPP 8
P PSPP
Sbjct: 510 PGRPSPP 516


>sp|AROA_THEKO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 PQEPSP 7
P+EPSP
Sbjct: 69 PEEPSP 74


>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 EPSPPS 9
EPSPP+
Sbjct: 18 EPSPPA 23


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PQEPSPP 8
P PSPP
Sbjct: 514 PGRPSPP 520


>sp|TRPC_PYRNV|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 EPSPP 8
EPSPP
Sbjct: 18 EPSPP 22


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SPQEPSPPSP 10
SP P PP+P
Sbjct: 525 SPSGPIPPTP 534




72|Sequence|356|365|SPPSPPVSLI

>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 2 PPSPPVSL 9
PP+PP++L
Sbjct: 59 PPNPPIAL 66


>sp|TRUA_THESM|TRNA pseudouridine synthase A|Thermococcus sibiricus (strain DSM 12597

Query: 2 PPSPPVSLI 10
PP+PP +L+
Sbjct: 212 PPAPPENLV 220


>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PPSPPVSLI 10
PP+PP L+
Sbjct: 209 PPAPPEGLL 217


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 2 PPSPPVSLI 10
PP+PP +LI
Sbjct: 213 PPAPPENLI 221


>sp|DNAG_METPE|DNA primase DnaG|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 SPPSPPVSL 9
S P+PPV+L
Sbjct: 320 SEPAPPVTL 328


>sp|TRUA_THEKO|TRNA pseudouridine synthase A|Thermococcus kodakarensis (strain ATCC

Query: 2 PPSPPVSLI 10
PP+PP L+
Sbjct: 213 PPAPPEGLV 221


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 2 PPSPPVSLI 10
PP+PP L+
Sbjct: 209 PPAPPEGLL 217


>sp|TF2B5_HALSA|TRANSCRIPTION initiation factor IIB 5|Halobacterium salinarum (strain ATCC 700922

Query: 3 PSPPVSL 9
P+PPVSL
Sbjct: 215 PTPPVSL 221


>sp|TRMY_METM7|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 PSPPVSL 9
P+PPV+L
Sbjct: 60 PNPPVTL 66


>sp|Y1446_ARCFU|UNCHARACTERIZED protein AF_1446|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PPSPPVSL 9
PP PPV+
Sbjct: 81 PPWPPVTF 88


>sp|TRMY_METVS|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 PSPPVSL 9
P+PPV+L
Sbjct: 60 PNPPVAL 66


>sp|TRMY_METMP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 PSPPVSL 9
P+PPV+L
Sbjct: 60 PNPPVAL 66


>sp|RN393_SACS2|CRISPR system ring nuclease SSO1393|Saccharolobus solfataricus (strain

Query: 3 PSPPVSL 9
PSPP+++
Sbjct: 200 PSPPITI 206


>sp|TRMY_METM6|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 PSPPVSL 9
P+PPV+L
Sbjct: 60 PNPPVAL 66


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 SPPSPPV 7
+PP PPV
Sbjct: 369 APPRPPV 375


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPSPP 6
PPSPP
Sbjct: 724 PPSPP 728


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PPSPP 6
PPSPP
Sbjct: 237 PPSPP 241




73|Sequence|361|370|PVSLISALVR

>sp|Y966_METJA|UNCHARACTERIZED protein MJ0966|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVSLISAL 8
P SLISAL
Sbjct: 413 PTSLISAL 420


>sp|TRM1_HALLT|TRNA (guanine(26)-N(2))-dimethyltransferase|Halorubrum lacusprofundi

Query: 3 SLISALVR 10
+LISALVR
Sbjct: 183 TLISALVR 190




74|Sequence|366|375|SALVRAHVDS

>sp|GVPN2_HALSA|GAS vesicle ATPase GvpN2|Halobacterium salinarum (strain ATCC 700922

Query: 1 SALVRAHVDS 10
+A+VRAHV++
Sbjct: 252 TAIVRAHVEA 261


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 2 ALVRAHVDS 10
LVR H+DS
Sbjct: 28 GLVRQHLDS 36


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 2 ALVRAHVDS 10
LVR H+DS
Sbjct: 22 GLVRQHLDS 30


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain

Query: 2 ALVRAHVDS 10
LVR H+DS
Sbjct: 22 GLVRQHLDS 30


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain

Query: 2 ALVRAHVDS 10
LVR H+DS
Sbjct: 19 GLVRQHLDS 27


>sp|GVPN1_HALSA|GAS vesicle ATPase GvpN1|Halobacterium salinarum (strain ATCC 700922

Query: 3 LVRAHVD 9
+VRAHVD
Sbjct: 256 IVRAHVD 262


>sp|GVPN_HALMT|GAS vesicle ATPase GvpN|Haloferax mediterranei (strain ATCC 33500

Query: 3 LVRAHVD 9
+VRAHVD
Sbjct: 256 IVRAHVD 262


>sp|COBQ_HALSA|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SALVRAHVD 9
+ALV AHVD
Sbjct: 492 AALVDAHVD 500


>sp|COBQ_HALS3|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 SALVRAHVD 9
+ALV AHVD
Sbjct: 492 AALVDAHVD 500


>sp|Y1674_METAR|UPF0280 protein UNCMA_16740|Methanocella arvoryzae (strain DSM 22066

Query: 3 LVRAHVD 9
+VRAHVD
Sbjct: 231 IVRAHVD 237


>sp|PGK_NATPD|PHOSPHOGLYCERATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ALVRAHVDS 10
A +RAHVD+
Sbjct: 34 ARLRAHVDT 42


>sp|PGK_HALSA|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ALVRAHVDS 10
A +RAHVD+
Sbjct: 36 ARLRAHVDT 44


>sp|PGK_HALS3|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ALVRAHVDS 10
A +RAHVD+
Sbjct: 36 ARLRAHVDT 44




75|Sequence|371|380|AHVDSNPAMT

>sp|HIS5_METAC|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina acetivorans

Query: 2 HVDSNPAMT 10
HV +NPA++
Sbjct: 23 HVGANPAIS 31


>sp|OMP1_IGNH4|MAJOR outer membrane protein 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 AHVDSNPA 8
A VD+NPA
Sbjct: 67 ASVDANPA 74


>sp|MTRA_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina acetivorans (strain

Query: 1 AHVDSNP 7
AHV SNP
Sbjct: 64 AHVISNP 70




76|Sequence|376|385|NPAMTSLDYS

>sp|ILVE_METJA|PUTATIVE branched-chain-amino-acid aminotransferase|Methanocaldococcus

Query: 1 NPAMTSLDY 9
NPA+ SL+Y
Sbjct: 142 NPAVKSLNY 150


>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 NPAMTSLDY 9
+PA+ S+DY
Sbjct: 51 DPALASIDY 59


>sp|NRPR1_METMA|GLOBAL nitrogen regulator NrpRI|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NPAMTSLDY 9
NP T LDY
Sbjct: 309 NPISTMLDY 317


>sp|DP2S_METTH|DNA polymerase II small subunit|Methanothermobacter thermautotrophicus

Query: 1 NPAMTSLD 8
NP++ SLD
Sbjct: 351 NPSLVSLD 358


>sp|FTSZ2_PYRHO|CELL division protein FtsZ 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PAMTSLDYS 10
P+M ++DY+
Sbjct: 233 PSMVNIDYA 241


>sp|FTSZ2_PYRAB|CELL division protein FtsZ 2|Pyrococcus abyssi (strain GE5 /

Query: 2 PAMTSLDYS 10
P+M ++DY+
Sbjct: 233 PSMVNIDYA 241


>sp|Y1053_ARCFU|UNCHARACTERIZED protein AF_1053|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NPAMTSLD 8
NPA TS+D
Sbjct: 250 NPADTSMD 257




77|Sequence|381|390|SLDYSRFQAN

>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SLDYSRFQA 9
SL+Y++F+A
Sbjct: 234 SLEYAKFRA 242


>sp|ARFB_METVM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus vulcanius (strain

Query: 2 LDYSRFQAN 10
LDY RF N
Sbjct: 84 LDYLRFMIN 92


>sp|PYRB_AERPE|ASPARTATE carbamoyltransferase catalytic subunit|Aeropyrum pernix (strain

Query: 1 SLDYSRFQA 9
S+D SR+QA
Sbjct: 278 SVDSSRYQA 286


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 3 DYSRFQAN 10
DY RF N
Sbjct: 359 DYKRFDVN 366




78|Sequence|386|395|RFQANPDYQM

>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 4 ANPDYQM 10
ANPDYQ+
Sbjct: 177 ANPDYQI 183


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 RFQANPDYQM 10
RF NPDY +
Sbjct: 90 RFAPNPDYTI 99


>sp|PYRG_THEKO|CTP synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RFQANPDY 8
R++ NPDY
Sbjct: 459 RWEVNPDY 466


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 1 RFQANPD 7
RFQ NPD
Sbjct: 369 RFQENPD 375


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FQANPD 7
F+ANPD
Sbjct: 24 FEANPD 29


>sp|Y048_ARCFU|UNCHARACTERIZED protein AF_0048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FQANPDYQM 10
F A+PDY +
Sbjct: 128 FYASPDYDL 136


>sp|RS8E_PYRNV|SMALL ribosomal subunit protein eS8|Pyrobaculum neutrophilum (strain

Query: 4 ANPDY 8
ANPDY
Sbjct: 90 ANPDY 94


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FQANPD 7
F+ANPD
Sbjct: 18 FEANPD 23


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FQANPDYQM 10
F+ NP+Y++
Sbjct: 26 FRDNPEYEV 34




79|Sequence|391|400|PDYQMSGDDT

>sp|SYE_NITMS|GLUTAMATE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 DYQMSGDDT 10
D+ +SGDD+
Sbjct: 448 DFYISGDDS 456


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 1 PDYQMSGDD 9
PD++ GDD
Sbjct: 279 PDFERDGDD 287


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 1 PDYQMSGDD 9
PD++ GDD
Sbjct: 279 PDFERDGDD 287


>sp|PURQ_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Picrophilus torridus (strain ATCC 700027

Query: 3 YQMSGDD 9
YQMSG++
Sbjct: 223 YQMSGNE 229


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PDYQMSGDD 9
PD++ GDD
Sbjct: 275 PDFERDGDD 283




80|Sequence|396|405|SGDDTQHIQQ

>sp|AOCD_METMP|ORNITHINE cyclodeaminase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SGDDTQHIQQ 10
SGD QH+ Q
Sbjct: 54 SGDTQQHLDQ 63


>sp|Y453_METLZ|UPF0280 protein Mlab_0453|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GDDTQHIQ 9
DDT H++
Sbjct: 17 ADDTSHVE 24


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 1 SGDDTQHI 8
SG DT H+
Sbjct: 55 SGSDTSHL 62


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain

Query: 4 DTQHIQQ 10
+T+H+QQ
Sbjct: 84 ETEHVQQ 90




81|Sequence|401|410|QHIQQFYDLL

>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 HIQQFYDLL 10
H Q+ YD+L
Sbjct: 503 HAQEIYDML 511


>sp|PURQ_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HIQQFY 7
HI+QFY
Sbjct: 37 HIKQFY 42


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 HIQQFYDLL 10
H++ FYD +
Sbjct: 393 HVEAFYDAI 401


>sp|CYSO_AERPE|PROTEIN CysO|Aeropyrum pernix (strain ATCC 700893

Query: 2 HIQQFYD 8
H+ QFY+
Sbjct: 221 HVNQFYN 227


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 QHIQQFYD 8
+H+ +FYD
Sbjct: 330 KHLGEFYD 337


>sp|MOAB_METJA|PROBABLE molybdopterin adenylyltransferase|Methanocaldococcus jannaschii

Query: 1 QHIQQFYDL 9
+HI +F+D+
Sbjct: 61 EHIVEFFDV 69


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 HIQQFYDLL 10
H++ FYD +
Sbjct: 389 HLEAFYDAI 397


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HIQQFYDLL 10
H+++FY+L+
Sbjct: 680 HLRRFYNLV 688


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 1 QHIQQFYD 8
+HI ++YD
Sbjct: 438 EHIYRYYD 445


>sp|Y711_METJA|UNCHARACTERIZED protein MJ0711|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QHIQQFYDLL 10
QH+ +FY LL
Sbjct: 292 QHLTEFYGLL 301




82|Sequence|406|415|FYDLLTGSME

>sp|ARLY_METM6|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C6 /

Query: 1 FYDLLTGSME 10
FYDL+ SM+
Sbjct: 218 FYDLIENSMD 227


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 2 YDLLTGSME 10
YD++TGS E
Sbjct: 175 YDIITGSEE 183


>sp|YPZ5_METTF|UNCHARACTERIZED protein ORF5'|Methanothermobacter thermautotrophicus

Query: 1 FYDLLTGSME 10
+YDL TG+ E
Sbjct: 80 YYDLETGTWE 89


>sp|YPV5A_METTF|UNCHARACTERIZED protein ORF5A|Methanothermobacter thermautotrophicus

Query: 1 FYDLLTGSME 10
+YDL TG+ E
Sbjct: 85 YYDLETGTWE 94


>sp|YPV5B_METTF|UNCHARACTERIZED protein ORF5B|Methanothermobacter thermautotrophicus

Query: 1 FYDLLTGSME 10
+YDL TG+ E
Sbjct: 32 YYDLETGTWE 41


>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 1 FYDLLTGSME 10
FYD++ SM+
Sbjct: 218 FYDIIENSMD 227


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YDLLTGSME 10
Y+LL+G M+
Sbjct: 175 YELLSGGMD 183


>sp|LADH_METJA|LACTALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YDLLTGSME 10
Y+LLTG+ E
Sbjct: 193 YNLLTGAGE 201


>sp|RDFA_HALVD|ROD-DETERMINING factor A|Haloferax volcanii (strain ATCC 29605

Query: 1 FYDLLTG 7
FY LLTG
Sbjct: 79 FYRLLTG 85


>sp|YPV4_METTF|UNCHARACTERIZED protein ORF4|Methanothermobacter thermautotrophicus

Query: 1 FYDLLTGS 8
FYD+ TG+
Sbjct: 68 FYDVTTGA 75


>sp|YPZ4_METTF|UNCHARACTERIZED protein ORF4'|Methanothermobacter thermautotrophicus

Query: 1 FYDLLTGS 8
FYD+ TG+
Sbjct: 68 FYDVTTGA 75


>sp|RISB_THEGJ|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FYDLLTGSM 9
F DLLTG +
Sbjct: 24 FNDLLTGEL 32


>sp|ARLY_METVS|ARGININOSUCCINATE lyase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FYDLLTGSME 10
FY+L+ SM+
Sbjct: 218 FYELIENSMD 227


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 1 FYDLLTGSME 10
FY +TG +E
Sbjct: 185 FYSKITGELE 194




83|Sequence|411|420|TGSMEIIRGW

>sp|SURE_METS3|5'-NUCLEOTIDASE SurE|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 TGSMEIIRGW 10
TG M++I+ W
Sbjct: 247 TGEMDLIKEW 256


>sp|DPO42_METMA|DNA polymerase IV 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GSMEIIRGW 10
G MEI+RG+
Sbjct: 101 GVMEILRGF 109


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 1 TGSMEIIRGW 10
TG+ EII W
Sbjct: 136 TGNDEIIEAW 145


>sp|CMR1A_PYRFU|CRISPR system Cmr subunit Cmr1-1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TGSMEIIRG 9
TGSM+I+R
Sbjct: 157 TGSMKIVRA 165


>sp|Y3061_HALSA|PUTATIVE sulfur carrier protein

Query: 1 TGSMEIIRGW 10
+GSM I GW
Sbjct: 45 SGSMSDIDGW 54


>sp|SYT_THEGJ|THREONINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 SMEIIRG 9
SME++RG
Sbjct: 371 SMEVLRG 377


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 1 TGSM---EIIRGW 10
T SM EI++GW
Sbjct: 381 TNSMAGSEILKGW 393


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 EIIRGW 10
E+I+GW
Sbjct: 384 ELIKGW 389


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 1 TGSMEIIRGW 10
TG EII W
Sbjct: 138 TGEEEIIEAW 147


>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TGSMEIIRGW 10
TG EI+ W
Sbjct: 136 TGDDEIVEAW 145


>sp|Y1071_ARCFU|UNCHARACTERIZED protein AF_1071|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GSMEIIRGW 10
GS+E + GW
Sbjct: 58 GSVEAVVGW 66


>sp|GIN23_SACS2|DNA replication complex GINS protein|Saccharolobus solfataricus

Query: 1 TGSMEIIRG 9
TG++E+++G
Sbjct: 33 TGNIELVKG 41




84|Sequence|416|425|IIRGWAEKIP

>sp|HIS4_METTH|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermobacter

Query: 1 IIRGWAEKIP 10
+IRGW EK+P
Sbjct: 136 VIRGWTEKVP 145


>sp|HIS4_SULTO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Sulfurisphaera tokodaii (strain

Query: 1 IIRGWAEK 8
+IRGW EK
Sbjct: 137 LIRGWKEK 144


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 IRGWAEKIP 10
+RGW E IP
Sbjct: 704 LRGWPEHIP 712


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 IIRGWAEKIP 10
++R W EK+P
Sbjct: 1 MLRFWQEKLP 10


>sp|IDI2_PYRHO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IIRGWAEKI 9
IIRG+AE+I
Sbjct: 317 IIRGYAEEI 325


>sp|HIS4_METJA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocaldococcus jannaschii

Query: 1 IIRGWAEKI 9
+I+GW EK+
Sbjct: 136 VIKGWKEKV 144


>sp|MTTC2_METAC|TRIMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IIRGWAEKI 9
+ +GWA+KI
Sbjct: 187 VTQGWADKI 195


>sp|MTAD2_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IIRGWAEKIP 10
++RG+AE +P
Sbjct: 65 LLRGYAEGLP 74


>sp|HIS4_METVO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus voltae

Query: 1 IIRGWAEK 8
+I+GW EK
Sbjct: 137 VIKGWKEK 144


>sp|DPO42_METMA|DNA polymerase IV 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IIRGWAEK 8
I+RG+AEK
Sbjct: 105 ILRGFAEK 112


>sp|HIS4_METVA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii

Query: 1 IIRGWAEK 8
+I+GW EK
Sbjct: 137 LIKGWTEK 144


>sp|HIS4_METVS|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii (strain

Query: 1 IIRGWAEK 8
+I+GW EK
Sbjct: 137 LIKGWTEK 144


>sp|Y376_METTP|UPF0282 protein Mthe_0376|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 GWAEKIP 10
G+AE+IP
Sbjct: 240 GYAERIP 246


>sp|HIS4_META3|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus aeolicus (strain

Query: 1 IIRGWAEK 8
+I+GW EK
Sbjct: 138 VIKGWMEK 145


>sp|HIS4_METMP|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis (strain

Query: 1 IIRGWAEK 8
+I+GW EK
Sbjct: 137 VIKGWKEK 144


>sp|HIS4_METM6|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis (strain

Query: 1 IIRGWAEK 8
+I+GW EK
Sbjct: 137 VIKGWKEK 144


>sp|HIS4_METM5|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis (strain

Query: 1 IIRGWAEK 8
+I+GW EK
Sbjct: 137 VIKGWKEK 144


>sp|HIS4_METM7|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis (strain

Query: 1 IIRGWAEK 8
+I+GW EK
Sbjct: 137 VIKGWKEK 144


>sp|HIS4_METTL|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermococcus

Query: 1 IIRGWAEK 8
+I+GW EK
Sbjct: 137 VIKGWKEK 144


>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IIRGWAEKI 9
+I G+AEKI
Sbjct: 532 MINGYAEKI 540


>sp|IDI2_PYRAB|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 IIRGWAEKI 9
II+G+AE+I
Sbjct: 316 IIKGYAEEI 324


>sp|Y1762_ARCFU|UNCHARACTERIZED protein AF_1762|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IIRGWAEKI 9
+ RG+AEK+
Sbjct: 31 LTRGFAEKV 39


>sp|RFRNP_METTH|RNA-FREE ribonuclease P|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 IRGWAEKI 9
IR WAE++
Sbjct: 191 IRVWAERL 198


>sp|KAE1B_METHJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 IRGWAEKIP 10
I+G+ EK+P
Sbjct: 493 IQGYREKMP 501


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 IRGWAEK 8
+R WAEK
Sbjct: 29 LRTWAEK 35


>sp|ACYP_THEVO|ACYLPHOSPHATASE volcanium (strain ATCC 51530

Query: 2 IRGWAEKIP 10
++GW + +P
Sbjct: 31 VKGWIKNLP 39


>sp|PUS10_KORCO|TRNA pseudouridine synthase Pus10|Korarchaeum cryptofilum (strain OPF8)

Query: 4 GWAEKIP 10
GW KIP
Sbjct: 161 GWKGKIP 167


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus fulgidus

Query: 2 IRGWAEK 8
I+GW EK
Sbjct: 458 IKGWLEK 464


>sp|RL4_METJA|LARGE ribosomal subunit protein uL4|Methanocaldococcus jannaschii

Query: 3 RGWAEKIP 10
+GWA ++P
Sbjct: 75 QGWAARVP 82


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 5 WAEKIP 10
W EKIP
Sbjct: 246 WGEKIP 251


>sp|RL30_SACI7|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 2 IRGWAE 7
IRGWA+
Sbjct: 10 IRGWAK 15


>sp|RL30_SACI6|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 2 IRGWAE 7
IRGWA+
Sbjct: 10 IRGWAK 15


>sp|RL30_SACI4|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 2 IRGWAE 7
IRGWA+
Sbjct: 10 IRGWAK 15


>sp|RL30_SACI3|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 2 IRGWAE 7
IRGWA+
Sbjct: 10 IRGWAK 15


>sp|RL30_SACI2|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 2 IRGWAE 7
IRGWA+
Sbjct: 10 IRGWAK 15


>sp|RL30_SACI1|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 2 IRGWAE 7
IRGWA+
Sbjct: 10 IRGWAK 15


>sp|RL4_ARCFU|LARGE ribosomal subunit protein uL4|Archaeoglobus fulgidus (strain ATCC

Query: 3 RGWAEKI 9
R WAEKI
Sbjct: 98 RKWAEKI 104


>sp|RL30_SACS2|LARGE ribosomal subunit protein uL30|Saccharolobus solfataricus (strain

Query: 2 IRGWAE 7
IRGWA+
Sbjct: 10 IRGWAK 15


>sp|RL30_SULAC|LARGE ribosomal subunit protein uL30|Sulfolobus acidocaldarius (strain

Query: 2 IRGWA 6
IRGWA
Sbjct: 10 IRGWA 14


>sp|THII_METMA|PROBABLE tRNA sulfurtransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IRGWAEKI 9
+R W EKI
Sbjct: 35 VRNWYEKI 42




85|Sequence|421|430|AEKIPGFADL

>sp|Y123_PYRFU|UPF0146 protein PF0123|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EKIPGFAD 9
E+IPGF D
Sbjct: 56 ERIPGFVD 63


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 AEKIPGFAD 9
AEKI GFA+
Sbjct: 510 AEKIEGFAE 518


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 AEKIPGFAD 9
AEKI GFA+
Sbjct: 510 AEKIEGFAE 518


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 AEKIPGFAD 9
AEKI GFA+
Sbjct: 510 AEKIEGFAE 518


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 AEKIPGFAD 9
AEKI GFA+
Sbjct: 510 AEKIEGFAE 518


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AEKIPGFAD 9
A IPGF+D
Sbjct: 696 ASTIPGFSD 704


>sp|Y120_METTH|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase|Methanothermobacter

Query: 2 EKIPGF 7
EKIPGF
Sbjct: 107 EKIPGF 112


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 2 EKIPGFA 8
EKIPGF
Sbjct: 536 EKIPGFG 542


>sp|Y992_METJA|UNCHARACTERIZED protein MJ0992|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AEKIPGFADL 10
AEK+P F L
Sbjct: 11 AEKLPTFKSL 20


>sp|PIMT_METHJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EKIPGFADL 10
E+IP ADL
Sbjct: 107 ERIPAVADL 115


>sp|FEN_METB6|FLAP endonuclease 1|Methanoregula boonei (strain DSM 21154

Query: 1 AEKIPGF 7
AEK PGF
Sbjct: 262 AEKCPGF 268


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AEKIPGFAD 9
EKI GFA+
Sbjct: 516 GEKIKGFAE 524


>sp|TRM56_METAR|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocella arvoryzae

Query: 1 AEKIPG 6
AEK+PG
Sbjct: 113 AEKVPG 118


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 2 EKIPGF 7
E+IPGF
Sbjct: 239 ERIPGF 244


>sp|AATE_CENSY|A-TYPE ATP synthase subunit E|Cenarchaeum symbiosum (strain A)

Query: 1 AEKIPGFADL 10
AE+ PG+ D+
Sbjct: 99 AERGPGYPDM 108


>sp|TRM56_METMJ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoculleus marisnigri

Query: 1 AEKIPG 6
AEK+PG
Sbjct: 110 AEKVPG 115


>sp|TRM56_METHJ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanospirillum hungatei

Query: 1 AEKIPG 6
AEK+PG
Sbjct: 108 AEKVPG 113


>sp|TRM56_METLZ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocorpusculum labreanum

Query: 1 AEKIPG 6
AEK+PG
Sbjct: 113 AEKVPG 118


>sp|AGL5_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl5|Haloferax volcanii

Query: 1 AEKIPGFA 8
+E++PGF+
Sbjct: 225 SEEVPGFS 232


>sp|TRM56_METB6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoregula boonei (strain

Query: 1 AEKIPG 6
AEK+PG
Sbjct: 112 AEKVPG 117


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 1 AEKIPGFAD 9
EK+PG D
Sbjct: 551 VEKVPGVLD 559




86|Sequence|426|435|GFADLPKADQ

>sp|GLMD_THEKO|GLUCOSAMINE-6-PHOSPHATE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FADLPKADQ 10
F DLPK D+
Sbjct: 280 FIDLPKVDE 288


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain

Query: 1 GFADLP 6
GFADLP
Sbjct: 38 GFADLP 43


>sp|CBIT_PYRCJ|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 FADLPKADQ 10
A+LPKAD+
Sbjct: 105 LAELPKADR 113


>sp|CSM4_THEON|CRISPR system Cms protein Csm4|Thermococcus onnurineus (strain NA1)

Query: 2 FADLPKAD 9
F D+P+AD
Sbjct: 15 FRDIPRAD 22


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GFADLPKAD 9
G DLPKA+
Sbjct: 90 GLPDLPKAE 98


>sp|HTPX_SACI1|PROTEASE HtpX homolog|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GFADLPK 7
GF D+PK
Sbjct: 97 GFRDVPK 103


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GFADLPKAD 9
GFAD+ KA+
Sbjct: 197 GFADIRKAE 205


>sp|TRUD_THEAC|PROBABLE tRNA pseudouridine synthase D|Thermoplasma acidophilum (strain

Query: 3 ADLPKAD 9
AD+PK+D
Sbjct: 32 ADIPKSD 38


>sp|AROA_METKA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 GFADLPKADQ 10
GF D P+A +
Sbjct: 78 GFGDSPRAPE 87


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 FADLPKADQ 10
+ LPKAD+
Sbjct: 114 YGHLPKADE 122


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 4 DLPKADQ 10
DLPK D+
Sbjct: 220 DLPKGDE 226




87|Sequence|431|440|PKADQDLLFE

>sp|NDK_METBU|NUCLEOSIDE diphosphate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PKADQDLLFE 10
P+AD + L+E
Sbjct: 140 PRADDEWLYE 149


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KADQDLLF 9
KAD+DL F
Sbjct: 366 KADRDLYF 373


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 2 KADQDLLFE 10
+ADQD L E
Sbjct: 145 RADQDFLAE 153


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 PKADQDLLF 9
PKAD LL+
Sbjct: 620 PKADGTLLY 628


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PKADQDL 7
PK+D+DL
Sbjct: 353 PKSDEDL 359


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DQDLLFE 10
D DLLFE
Sbjct: 1548 DNDLLFE 1554


>sp|FOLD_PYRCJ|BIFUNCTIONAL protein FolD|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PKADQDLLFE 10
P D+DLLF+
Sbjct: 104 PFVDEDLLFQ 113




88|Sequence|436|445|DLLFESAFLE

>sp|PYRK_METBF|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina barkeri

Query: 1 DLLFESAFLE 10
DLLFE F E
Sbjct: 133 DLLFEKRFAE 142


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLLFESAFLE 10
DL+FE A+ E
Sbjct: 18 DLVFEEAYKE 27


>sp|RNZ_NITMS|RIBONUCLEASE Z|Nitrosopumilus maritimus (strain SCM1)

Query: 2 LLFESAFLE 10
L+F+S FLE
Sbjct: 224 LVFDSTFLE 232


>sp|Y678_METMP|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 1 DLLFESAFL 9
DLL+ES F+
Sbjct: 11 DLLYESHFV 19




89|Sequence|441|450|SAFLELFVLR

>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AFLELFVLR 10
AFLE FVL+
Sbjct: 284 AFLERFVLQ 292




90|Sequence|446|455|LFVLRLAYRS

>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LFVLRLAYRS 10
LFVL+ YRS
Sbjct: 291 LFVLQRHYRS 300


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LFVLRLAYRS 10
LFVL+ YRS
Sbjct: 291 LFVLQRHYRS 300


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LFVLRLAYRS 10
LFVL+ YRS
Sbjct: 291 LFVLQKHYRS 300




91|Sequence|451|460|LAYRSNPVEG

>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LAYRSNPVE 9
LA RSNP E
Sbjct: 93 LARRSNPTE 101


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAYRSNPV 8
+A+RSNP+
Sbjct: 348 MAWRSNPL 355


>sp|HIS2_METBU|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 4 RSNPVEG 10
++NPVEG
Sbjct: 20 KNNPVEG 26


>sp|HIS6_HALSA|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum

Query: 1 LAYRSNPVE 9
LAY +PVE
Sbjct: 32 LAYTGDPVE 40


>sp|HIS6_HALS3|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum

Query: 1 LAYRSNPVE 9
LAY +PVE
Sbjct: 32 LAYTGDPVE 40


>sp|Y418_METJA|UNCHARACTERIZED protein MJ0418|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YRSNPVEG 10
Y NP+EG
Sbjct: 128 YELNPIEG 135


>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LAYRSNPVEG 10
L Y PVEG
Sbjct: 337 LVYNETPVEG 346


>sp|RIFK_HALMA|RIBOFLAVIN kinase|Haloarcula marismortui (strain ATCC 43049

Query: 2 AYRSNPV 8
A+R+NPV
Sbjct: 56 AFRTNPV 62


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 1 LAYRSNPVEG 10
LAYR N V G
Sbjct: 164 LAYRKNEVLG 173


>sp|PIMT_METVS|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 AYRSNPVE 9
AY+ NP+E
Sbjct: 45 AYQDNPLE 52


>sp|RTCA_AERPE|RNA 3'-terminal phosphate cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LAYRSNPVE 9
LAY +PVE
Sbjct: 111 LAYSDSPVE 119


>sp|PMDHS_AERPE|PHOSPHOMEVALONATE dehydratase small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 LAYRSNPVEG 10
L YRS P+ G
Sbjct: 4 LRYRSRPIVG 13


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 YRSNPVEG 10
YRS PV G
Sbjct: 520 YRSTPVIG 527


>sp|MBD_THEVO|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma volcanium (strain

Query: 3 YRSNPVEG 10
Y NP++G
Sbjct: 32 YEPNPIDG 39




92|Sequence|456|465|NPVEGKLIFC

>sp|TRM1_THEAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma acidophilum

Query: 1 NPVEGKLIFC 10
NP E +L+FC
Sbjct: 272 NPEENRLLFC 281


>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PVEGKLIF 9
PVEGK+I
Sbjct: 113 PVEGKIIL 120


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PVEGKLIF 9
P EGKLI+
Sbjct: 122 PKEGKLIY 129


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 2 PVEGKLIF 9
PVEG+L F
Sbjct: 227 PVEGRLPF 234


>sp|RNP4_SULTO|RIBONUCLEASE P protein component 4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PVEGKLIFC 10
P+E K +FC
Sbjct: 52 PIEYKRLFC 60


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EGKLIFC 10
EGKLI C
Sbjct: 520 EGKLILC 526


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 2 PVEGKLIF 9
PVEG+L F
Sbjct: 639 PVEGELRF 646


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 VEGKLIFC 10
VEGK FC
Sbjct: 138 VEGKCPFC 145


>sp|RL18_DESA1|LARGE ribosomal subunit protein uL18|Desulfurococcus amylolyticus (strain

Query: 2 PVEGKLIF 9
PV+G L+F
Sbjct: 111 PVKGALVF 118


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NPVEGKLIF 9
NP EGK++
Sbjct: 1004 NPEEGKVVL 1012


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 NPVEGKLIF 9
NPV GK+++
Sbjct: 173 NPVTGKIVW 181


>sp|PCNA_THEON|DNA polymerase sliding clamp|Thermococcus onnurineus (strain NA1)

Query: 4 EGKLIF 9
EGKLIF
Sbjct: 236 EGKLIF 241


>sp|ASD_METTH|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanothermobacter

Query: 2 PVEGKLIF 9
PV GK+I+
Sbjct: 107 PVSGKVIY 114


>sp|HIS2_METBU|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 NPVEGKLI 8
NPVEG +
Sbjct: 22 NPVEGSYV 29


>sp|Y418_METJA|UNCHARACTERIZED protein MJ0418|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NPVEGK 6
NP+EGK
Sbjct: 131 NPIEGK 136


>sp|DHAS_METJA|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EGKLIF 9
EGKLIF
Sbjct: 106 EGKLIF 111


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 2 PVEGKLIFC 10
P+E +IFC
Sbjct: 396 PLERHIIFC 404


>sp|ANTRA_HALVD|PROBABLE anion import ATP-binding protein|Haloferax volcanii (strain ATCC

Query: 3 VEGKLIF 9
VEGKL++
Sbjct: 282 VEGKLVY 288


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 2 PVEGKLI 8
P EGKLI
Sbjct: 390 PTEGKLI 396


>sp|KHSE_METJA|HOMOSERINE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PVEGKLI 8
PV GKLI
Sbjct: 229 PVRGKLI 235




93|Sequence|461|470|KLIFCNGVVL

>sp|FLAK_METVO|PREFLAGELLIN peptidase|Methanococcus voltae

Query: 2 LIFCNGVVL 10
L+F NGV+L
Sbjct: 116 LVFFNGVIL 124


>sp|Y1344_SULAC|PUTATIVE HTH-type transcriptional regulatory protein|Sulfolobus

Query: 1 KLIFCNGV 8
KLIFC V
Sbjct: 240 KLIFCTEV 247


>sp|Y3507_METJA|UNCHARACTERIZED protein MJECL07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLIFCNGVV 9
K+ FC+G+V
Sbjct: 59 KVEFCSGIV 67


>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KLIFCNGVVL 10
KLI+ NGV L
Sbjct: 268 KLIYENGVPL 277


>sp|PSB_METB6|PROTEASOME subunit beta|Methanoregula boonei (strain DSM 21154

Query: 2 LIFCNGVVL 10
L+F GV+L
Sbjct: 17 LVFAGGVIL 25


>sp|Y184_METJA|UNCHARACTERIZED protein MJ0184|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IFCNGVVL 10
+F NG++L
Sbjct: 22 VFANGIIL 29




94|Sequence|466|475|NGVVLHRLQC

>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NGVVLHR 7
NGVVLHR
Sbjct: 590 NGVVLHR 596


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 NGVVLHR 7
NGVVLHR
Sbjct: 582 NGVVLHR 588


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 NGVVLHRLQ 9
+GVVLHR++
Sbjct: 566 DGVVLHRVE 574


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 GVVLHRL 8
G++LHRL
Sbjct: 554 GIILHRL 560


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NGVVLHR 7
+GVVLHR
Sbjct: 586 DGVVLHR 592


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 NGVVLHR 7
+GVVLHR
Sbjct: 586 DGVVLHR 592


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 1 NGVVLHRLQ 9
NG+VLH Q
Sbjct: 625 NGLVLHNTQ 633


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 NGVVLHRLQ 9
NG+VLH Q
Sbjct: 318 NGLVLHNTQ 326


>sp|CAH_METTT|CARBONIC anhydrase|Methanosarcina thermophila (strain ATCC 43570

Query: 1 NGVVLHRLQ 9
+GVVLH L+
Sbjct: 110 DGVVLHALE 118


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NGVVLHRL 8
NG+V H++
Sbjct: 561 NGIVFHKV 568


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NGVVLHRL 8
NG+V H++
Sbjct: 561 NGIVFHKV 568


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 NGVVLHRL 8
NG+V H++
Sbjct: 561 NGIVFHKV 568


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 NGVVLHRL 8
NG+V H++
Sbjct: 561 NGIVFHKV 568


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 NGVVLHRL 8
NG+V H++
Sbjct: 561 NGIVFHKV 568


>sp|Y661_METJA|UNCHARACTERIZED protein MJ0661|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NGVVLHRLQC 10
NG+ H ++C
Sbjct: 22 NGIAYHCIKC 31




95|Sequence|471|480|HRLQCVRGFG

>sp|HDRB2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 HRLQCVRGFG 10
H+L C+R G
Sbjct: 215 HKLACIRNAG 224




96|Sequence|476|485|VRGFGEWIDS

>sp|Y3503_METJA|UNCHARACTERIZED protein MJECL03|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VRGFGEWI 8
V GFGEWI
Sbjct: 8 VGGFGEWI 15


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 VRGFGEWIDS 10
VRG EW+ S
Sbjct: 1115 VRGIAEWLRS 1124


>sp|GCH3_PYRCJ|GTP cyclohydrolase III|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VRGFGEWIDS 10
+RG+ EW +S
Sbjct: 9 LRGYREWTES 18


>sp|GCH3_PYRAR|GTP cyclohydrolase III|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VRGFGEWIDS 10
+RG+ EW +S
Sbjct: 9 LRGYREWTES 18


>sp|GCH3_PYRAE|GTP cyclohydrolase III|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VRGFGEWIDS 10
+RG+ EW +S
Sbjct: 9 LRGYREWTES 18


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RGFGEWID 9
R FGEW D
Sbjct: 782 RFFGEWKD 789


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RGFGEWID 9
R FGEW D
Sbjct: 782 RFFGEWKD 789


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RGFGEWID 9
R FGEW D
Sbjct: 782 RFFGEWKD 789


>sp|ARCSA_THEAC|ARCHAEOSINE synthase subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 FGEWI 8
FGEWI
Sbjct: 391 FGEWI 395


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VRGFGEWIDS 10
VRGFG ID+
Sbjct: 617 VRGFGVSIDT 626


>sp|PHAE_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloarcula hispanica (strain ATCC 33960

Query: 2 RGFGEWIDS 10
R + EWID+
Sbjct: 63 RAYEEWIDA 71


>sp|IF2P_HALLT|PROBABLE translation initiation factor IF-2|Halorubrum lacusprofundi (strain

Query: 2 RGFGEWIDS 10
RGFG ID+
Sbjct: 248 RGFGATIDT 256


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RGFGEWID 9
+ F EW+D
Sbjct: 10 KNFSEWLD 17


>sp|UPPP_SACS2|UNDECAPRENYL-DIPHOSPHATASE solfataricus (strain ATCC 35092

Query: 1 VRGFGEWI 8
V+G EWI
Sbjct: 13 VQGISEWI 20


>sp|UPPP_SACI6|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain M.16.4 /

Query: 1 VRGFGEWI 8
V+G EWI
Sbjct: 13 VQGISEWI 20


>sp|UPPP_SACI4|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain M.14.25 /

Query: 1 VRGFGEWI 8
V+G EWI
Sbjct: 13 VQGISEWI 20


>sp|GCH3_PYRIL|GTP cyclohydrolase III|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VRGFGEWIDS 10
++G+ EW +S
Sbjct: 9 LKGYREWTES 18


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 4 FGEWID 9
FG WID
Sbjct: 321 FGPWID 326


>sp|HYD2G_PYRFU|SULFHYDROGENASE 2 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VRGFGEW 7
+RGFGE+
Sbjct: 49 IRGFGEF 55


>sp|Y1613_METJA|UNCHARACTERIZED protein MJ1613|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VRGFGEWID 9
V+GFG +D
Sbjct: 215 VKGFGSGVD 223


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 3 GFGEWIDS 10
GFGE ID+
Sbjct: 93 GFGEPIDN 100


>sp|GCH3_PYRNV|GTP cyclohydrolase III|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VRGFGEWIDS 10
++G+ EW +S
Sbjct: 9 LKGYREWTES 18


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 FGEWID 9
+G+W+D
Sbjct: 263 YGDWVD 268


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GFGEWIDS 10
G G W DS
Sbjct: 1008 GMGRWADS 1015


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 RGFGEWID 9
+ F EW D
Sbjct: 10 KNFSEWFD 17


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 RGFGEWID 9
+ F EW D
Sbjct: 10 KNFSEWFD 17


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 RGFGEWID 9
+ F EW D
Sbjct: 10 KNFSEWFD 17


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 RGFGEWID 9
+ F EW D
Sbjct: 10 KNFSEWFD 17


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 RGFGEWID 9
+ F EW D
Sbjct: 10 KNFSEWFD 17


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 RGFGEWID 9
+ F EW D
Sbjct: 10 KNFSEWFD 17


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RGFGEWID 9
+ F EW D
Sbjct: 10 KNFSEWFD 17




97|Sequence|481|490|EWIDSIVEFS

>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 1 EWIDSIVE 8
EW+DS+ E
Sbjct: 113 EWLDSVAE 120


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 EWIDSIVE 8
EW D IVE
Sbjct: 45 EWADKIVE 52


>sp|NNR_KORCO|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Korarchaeum cryptofilum (strain

Query: 1 EWIDSIVE 8
EW D+IV+
Sbjct: 116 EWADAIVD 123


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM

Query: 1 EWIDSIV 7
EWI+SI+
Sbjct: 28 EWIESII 34


>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 WIDSIVEF 9
++DS+VEF
Sbjct: 204 YLDSLVEF 211


>sp|LADH_METJA|LACTALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EWIDSIVE 8
EW++ +VE
Sbjct: 323 EWVEKVVE 330


>sp|CDC45_SULAC|CELL division control protein 45|Sulfolobus acidocaldarius (strain ATCC

Query: 3 IDSIVEFS 10
+DSIV+FS
Sbjct: 275 VDSIVDFS 282


>sp|METK_METM7|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 EWIDSIVEFS 10
+W+D+I E +
Sbjct: 385 KWLDNITEVT 394


>sp|METK_METJA|S-ADENOSYLMETHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EWIDSIVE 8
+W+D+I+E
Sbjct: 386 KWLDNIME 393


>sp|RL30_KORCO|LARGE ribosomal subunit protein uL30|Korarchaeum cryptofilum (strain

Query: 1 EWIDSIVEFS 10
EW+ S +FS
Sbjct: 89 EWLSSNTDFS 98


>sp|AROB_PYRAB|3-DEHYDROQUINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 WIDSIVEF 9
W+D I+E
Sbjct: 36 WLDKIIEL 43


>sp|KTHY_THEAC|PROBABLE thymidylate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EWIDSIVE 8
EW+DS+ E
Sbjct: 105 EWMDSVSE 112


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 WIDSIVEFS 10
WID + +FS
Sbjct: 973 WIDPVGDFS 981


>sp|THI4_NATPD|THIAMINE thiazole synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EWIDSIVEFS 10
EW + ++FS
Sbjct: 22 EWTEEFMDFS 31


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EWIDSI 6
+WIDSI
Sbjct: 399 DWIDSI 404


>sp|IF2A_METS3|TRANSLATION initiation factor 2 subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 EWIDSIVEFS 10
EW D+I E +
Sbjct: 159 EWADAITEIA 168




98|Sequence|486|495|IVEFSSNLQN

>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus (strain

Query: 1 IVEFSSNLQN 10
IVEF NL+N
Sbjct: 164 IVEFRKNLEN 173


>sp|MALG_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 1 IVEFSSNLQN 10
+VE+ S L+N
Sbjct: 45 LVEYKSTLEN 54




99|Sequence|491|500|SNLQNMNIDI

>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 1 SNLQNMNIDI 10
S QN+NIDI
Sbjct: 201 SAQQNINIDI 210


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 4 QNMNIDI 10
+NMNID+
Sbjct: 155 ENMNIDV 161


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 NLQNMNIDI 10
+L+N NID+
Sbjct: 143 DLENFNIDV 151


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 SNLQNMNIDI 10
S QN+NID+
Sbjct: 213 SAQQNINIDV 222


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 SNLQNMNI 8
S +QNMNI
Sbjct: 323 SAIQNMNI 330


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 QNMNIDI 10
+NMN+D+
Sbjct: 152 ENMNVDV 158


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 4 QNMNIDI 10
+NMN+D+
Sbjct: 146 ENMNVDV 152


>sp|GLYA_METTH|SERINE hydroxymethyltransferase|Methanothermobacter thermautotrophicus

Query: 2 NLQNMNID 9
+ +NMNID
Sbjct: 144 DFENMNID 151


>sp|GLYA_PYRNV|SERINE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 NLQNMNIDI 10
+L+N N+D+
Sbjct: 143 DLENFNVDV 151


>sp|GLYA_PYRCJ|SERINE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 NLQNMNIDI 10
+L+N N+D+
Sbjct: 143 DLENFNVDV 151


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 2 NLQNMNID 9
+ +NMNID
Sbjct: 144 DFENMNID 151


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 QNMNIDI 10
QN+N+D+
Sbjct: 146 QNINVDV 152


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 3 LQNMNIDI 10
L+N+N+DI
Sbjct: 333 LKNVNLDI 340


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SNLQNMNIDI 10
+NL MN+D+
Sbjct: 204 ANLIEMNVDV 213




100|Sequence|496|505|MNIDISAFSC

>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii (strain

Query: 1 MNIDISAFSC 10
+ IDIS F+C
Sbjct: 155 IGIDISPFNC 164


>sp|MER_METTM|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 NIDISAFSC 10
+ID++A++C
Sbjct: 198 DIDVAAYTC 206


>sp|MER_METTH|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 NIDISAFSC 10
+ID++A++C
Sbjct: 198 DIDVAAYTC 206


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NIDISAFS 9
N+DI AFS
Sbjct: 146 NVDIKAFS 153


>sp|MER_METKA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanopyrus kandleri (strain AV19 /

Query: 3 IDISAFSC 10
ID++A++C
Sbjct: 224 IDVAAYTC 231


>sp|MTHT_METTF|TYPE II methyltransferase M.MthTI|Methanothermobacter

Query: 1 MNIDISAF 8
MN+DI++F
Sbjct: 1 MNMDIASF 8


>sp|MER_METJA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IDISAFSC 10
ID++A++C
Sbjct: 206 IDVAAYAC 213


>sp|RSMA_HALSA|PROBABLE ribosomal RNA small subunit|Halobacterium salinarum (strain ATCC

Query: 1 MNIDISAFSC 10
+ +D+ AF+C
Sbjct: 102 LAVDLPAFTC 111


>sp|RSMA_HALS3|PROBABLE ribosomal RNA small subunit|Halobacterium salinarum (strain ATCC

Query: 1 MNIDISAFSC 10
+ +D+ AF+C
Sbjct: 102 LAVDLPAFTC 111


>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NIDISAF 8
NI+ISAF
Sbjct: 120 NIEISAF 126


>sp|MER_METMA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IDISAFSC 10
+D++A++C
Sbjct: 204 VDVTAYAC 211


>sp|MER_METBF|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina barkeri (strain Fusaro /

Query: 3 IDISAFSC 10
+D++A++C
Sbjct: 204 VDVTAYAC 211


>sp|MER_METAC|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IDISAFSC 10
+D++A++C
Sbjct: 204 VDVTAYAC 211


>sp|MER_METTI|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanolobus tindarius

Query: 3 IDISAFSC 10
+D++A++C
Sbjct: 204 VDVAAYAC 211


>sp|Y1177_METJA|PUTATIVE transport protein MJ1177|Methanocaldococcus jannaschii (strain

Query: 3 IDISAFSC 10
ID+ A+SC
Sbjct: 29 IDVLAYSC 36




101|Sequence|501|510|SAFSCIAALA

***** No hits found ******


102|Sequence|506|515|IAALAMVTER

***** No hits found ******


103|Sequence|511|520|MVTERHGLKE

>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 1 MVTERHGLKE 10
++TER G+KE
Sbjct: 229 IITERTGIKE 238


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MVTERHGLK 9
+V+ERHG K
Sbjct: 444 VVSERHGYK 452


>sp|XACR_HALVD|HTH-TYPE transcriptional regulator XacR|Haloferax volcanii (strain ATCC

Query: 2 VTERHGLKE 10
+ ERHGL++
Sbjct: 155 IIERHGLEQ 163


>sp|GCH1_SULAC|GTP cyclohydrolase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 TERHGLKE 10
TER GLKE
Sbjct: 30 TEREGLKE 37


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VTERHGL 8
+TER+GL
Sbjct: 20 ITERYGL 26


>sp|Y954_METVS|UNCHARACTERIZED solute-binding protein Mevan_0954|Methanococcus vannielii (strain

Query: 2 VTERHGLK 9
V ++HGLK
Sbjct: 227 VADQHGLK 234


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 VTERHGL 8
+TER+GL
Sbjct: 20 ITERYGL 26


>sp|SECE_THEKO|PROTEIN translocase subunit SecE|Thermococcus kodakarensis (strain ATCC

Query: 1 MVTERHGLKE 10
+VT++ G+KE
Sbjct: 20 LVTKKPGMKE 29


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 MVTERHGLKE 10
+ E HGL+E
Sbjct: 217 LTVEDHGLRE 226


>sp|GCH1_SACI7|GTP cyclohydrolase 1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 ERHGLKE 10
ER GLKE
Sbjct: 31 EREGLKE 37


>sp|GCH1_SACI6|GTP cyclohydrolase 1|Saccharolobus islandicus (strain M.16.4 /

Query: 4 ERHGLKE 10
ER GLKE
Sbjct: 31 EREGLKE 37


>sp|GCH1_SACI4|GTP cyclohydrolase 1|Saccharolobus islandicus (strain M.14.25 /

Query: 4 ERHGLKE 10
ER GLKE
Sbjct: 31 EREGLKE 37


>sp|GCH1_SACI3|GTP cyclohydrolase 1|Saccharolobus islandicus (strain M.16.27)

Query: 4 ERHGLKE 10
ER GLKE
Sbjct: 31 EREGLKE 37


>sp|GCH1_SACI2|GTP cyclohydrolase 1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 ERHGLKE 10
ER GLKE
Sbjct: 31 EREGLKE 37


>sp|BRIX_METTH|PROBABLE Brix domain-containing ribosomal biogenesis|Methanothermobacter

Query: 1 MVTERHG 7
+V+ERHG
Sbjct: 49 VVSERHG 55


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VTERHGLK 9
+ RHGLK
Sbjct: 496 ILRRHGLK 503


>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 4 ERHGLKE 10
E+HGLK+
Sbjct: 28 EKHGLKK 34




104|Sequence|516|525|HGLKEPKRVE

>sp|MVHB_METFE|POLYFERREDOXIN protein MvhB|Methanothermus fervidus

Query: 2 GLKEPKRVE 10
G+KEP RVE
Sbjct: 126 GVKEPARVE 134


>sp|MVHB_METTM|POLYFERREDOXIN protein MvhB|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 GLKEPKRVE 10
G+KEP +VE
Sbjct: 126 GIKEPAKVE 134


>sp|MVHB_METTH|POLYFERREDOXIN protein MvhB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GLKEPKRVE 10
G+KEP +VE
Sbjct: 126 GIKEPAKVE 134


>sp|TRPF_PYRFU|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HGLKEPKRVE 10
+G+K+PK VE
Sbjct: 188 YGIKDPKLVE 197


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GLKEPKRVE 10
GL EPKR++
Sbjct: 370 GLDEPKRLK 378


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 HGLKEPKRV 9
HGL+EP+ V
Sbjct: 222 HGLREPEYV 230


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 GLKEPKRVE 10
G+ EPKR++
Sbjct: 376 GIDEPKRLK 384


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 HGLKEPK 7
HG+K+PK
Sbjct: 304 HGIKKPK 310


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GLKEPKRVE 10
G+ EPKR++
Sbjct: 369 GIDEPKRLK 377


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GLKEPKRVE 10
G+ EPKR++
Sbjct: 376 GIDEPKRLK 384


>sp|IF2B_PYRAE|TRANSLATION initiation factor 2 subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 HGLKEPKRVE 10
HG K PK VE
Sbjct: 79 HGEKSPKVVE 88


>sp|IF2B_PYRCJ|TRANSLATION initiation factor 2 subunit|Pyrobaculum calidifontis (strain DSM

Query: 1 HGLKEPKRVE 10
HG K PK VE
Sbjct: 79 HGEKSPKVVE 88


>sp|IF2B_PYRNV|TRANSLATION initiation factor 2 subunit|Pyrobaculum neutrophilum (strain DSM

Query: 1 HGLKEPKRVE 10
HG K PK VE
Sbjct: 79 HGEKSPKVVE 88


>sp|IF2B_PYRAR|TRANSLATION initiation factor 2 subunit|Pyrobaculum arsenaticum (strain DSM

Query: 1 HGLKEPKRVE 10
HG K PK VE
Sbjct: 79 HGEKSPKVVE 88


>sp|IF2B_PYRIL|TRANSLATION initiation factor 2 subunit|Pyrobaculum islandicum (strain DSM

Query: 1 HGLKEPKRVE 10
HG K PK VE
Sbjct: 79 HGEKSPKVVE 88


>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 2 GLKEPKRV 9
GLKE KRV
Sbjct: 217 GLKEIKRV 224


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HGLKEPK 7
+GLK+PK
Sbjct: 138 YGLKDPK 144


>sp|THRC_METJA|THREONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HGLKEP 6
HGLK+P
Sbjct: 373 HGLKDP 378


>sp|NFI_NANEQ|BIFUNCTIONAL methyltransferase-like/endonuclease|Nanoarchaeum equitans (strain

Query: 1 HGLKEPKRV 9
HGL P+++
Sbjct: 199 HGLSHPRKM 207


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 4 KEPKRVE 10
KEPKR++
Sbjct: 314 KEPKRID 320


>sp|PEPQ_PYRHO|XAA-PRO dipeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HGLKEPKRVE 10
HG+ KR+E
Sbjct: 195 HGVASDKRIE 204


>sp|PEPQ_PYRFU|XAA-PRO dipeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HGLKEPKRVE 10
HG+ KR+E
Sbjct: 192 HGVASDKRIE 201


>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LKEPKRVE 10
LKE KRVE
Sbjct: 168 LKEGKRVE 175


>sp|RL15_PYRNV|LARGE ribosomal subunit protein uL15|Pyrobaculum neutrophilum (strain

Query: 1 HGLKEPKRVE 10
HG K+P+ +
Sbjct: 64 HGFKQPQAIS 73


>sp|Y132_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 1 HGLKEPKRV 9
GLKEP+ V
Sbjct: 229 FGLKEPELV 237




105|Sequence|521|530|PKRVEELQNK

>sp|FLAC_METVO|PUTATIVE flagella-related protein C|Methanococcus voltae

Query: 2 KRVEELQN 9
KRVEELQN
Sbjct: 139 KRVEELQN 146


>sp|TRUB_THEVO|PROBABLE tRNA pseudouridine synthase B|Thermoplasma volcanium (strain ATCC

Query: 1 PKRVEELQNK 10
P RV +LQNK
Sbjct: 334 PNRVRKLQNK 343


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 1 PKRVEELQNK 10
P+R+EEL+ K
Sbjct: 419 PERIEELKTK 428


>sp|LYSJ_PYRHO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 KRVEELQNK 10
K VEELQN+
Sbjct: 314 KYVEELQNR 322


>sp|RL7A_SULTO|LARGE ribosomal subunit protein eL8|Sulfurisphaera tokodaii (strain DSM

Query: 2 KRVEELQNK 10
KRVEEL+ K
Sbjct: 116 KRVEELKGK 124


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PKRVEELQNK 10
P+R+E+L +K
Sbjct: 9 PRRLEDLVDK 18


>sp|LYSJ_PYRFU|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 KRVEELQNK 10
K VEELQN+
Sbjct: 314 KVVEELQNR 322


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 PKRVEELQNK 10
PKRVE++ N+
Sbjct: 18 PKRVEDVVNQ 27


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PKRVEELQNK 10
P+ +EEL+N+
Sbjct: 303 PEAIEELRNQ 312


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 PKRVEELQNK 10
PK EE+QNK
Sbjct: 495 PKVQEEIQNK 504


>sp|CAS5_METJA|CRISPR-ASSOCIATED protein Cas5|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KRVEELQNK 10
K VEEL+NK
Sbjct: 61 KTVEELENK 69


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 KRVEELQNK 10
KR+EEL N+
Sbjct: 641 KRIEELANE 649


>sp|MRE11_METMP|DNA double-strand break repair protein|Methanococcus maripaludis

Query: 2 KRVEELQN 9
K VEELQN
Sbjct: 268 KTVEELQN 275


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PKRVEELQNK 10
P+ +EEL+N+
Sbjct: 303 PEAIEELRNQ 312


>sp|Y100_ARCFU|UPF0175 protein AF_0100|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PKRVEEL 7
PKR+EEL
Sbjct: 18 PKRLEEL 24


>sp|Y776_METJA|UNCHARACTERIZED protein MJ0776|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKRVEELQNK 10
PK++ E+ NK
Sbjct: 118 PKKINEISNK 127


>sp|NIKR1_METTH|PUTATIVE nickel-responsive regulator 1|Methanothermobacter

Query: 1 PKRVEELQNK 10
P+RVE+L K
Sbjct: 62 PRRVEDLVTK 71


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 2 KRVEELQNK 10
KRVEEL+ K
Sbjct: 273 KRVEELKEK 281


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 1 PKRVEELQ 8
PKR++EL+
Sbjct: 199 PKRIKELE 206


>sp|Y685_PYRNV|UPF0201 protein Tneu_0685|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PKRVEE 6
PKRVEE
Sbjct: 28 PKRVEE 33


>sp|DNAG_AERPE|DNA primase DnaG|Aeropyrum pernix (strain ATCC 700893

Query: 4 VEELQNK 10
+EELQNK
Sbjct: 38 LEELQNK 44


>sp|LYSJ_PYRAB|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 KRVEELQNK 10
+ VEELQN+
Sbjct: 314 RYVEELQNE 322




106|Sequence|526|535|ELQNKIVNCL

>sp|Y1354_METJA|UNCHARACTERIZED protein MJ1354|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELQNKIVN 8
EL+NKI+N
Sbjct: 47 ELENKIIN 54


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ELQNKIV 7
ELQNKIV
Sbjct: 703 ELQNKIV 709


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ELQNKIVNC 9
EL+N+I C
Sbjct: 403 ELENRIFEC 411


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LQNKIVNC 9
L+N+++NC
Sbjct: 409 LENQLLNC 416


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 ELQNKIV 7
ELQNKI+
Sbjct: 421 ELQNKIL 427


>sp|LIPB2_PICTO|PROBABLE octanoyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 1 ELQNKIVNCL 10
++QN +VN L
Sbjct: 122 KIQNSVVNTL 131




107|Sequence|531|540|IVNCLKDHVT

>sp|RS7_THEVO|SMALL ribosomal subunit protein uS7|Thermoplasma volcanium (strain ATCC

Query: 1 IVNCLKDHV 9
IVNCL D +
Sbjct: 149 IVNCLADEI 157


>sp|RS7_THEAC|SMALL ribosomal subunit protein uS7|Thermoplasma acidophilum (strain ATCC

Query: 1 IVNCLKDHV 9
IVNCL D +
Sbjct: 149 IVNCLADEI 157


>sp|Y916_METJA|UNCHARACTERIZED protein MJ0916|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NCLKDHVT 10
CLKD+VT
Sbjct: 47 GCLKDYVT 54


>sp|AROA_SACI7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain

Query: 1 IVNCLKDH 8
I +CL DH
Sbjct: 363 ITDCLNDH 370


>sp|AROA_SACI6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IVNCLKDH 8
I +CL DH
Sbjct: 363 ITDCLNDH 370


>sp|AROA_SACI4|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 1 IVNCLKDH 8
I +CL DH
Sbjct: 363 ITDCLNDH 370


>sp|AROA_SACI3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 IVNCLKDH 8
I +CL DH
Sbjct: 363 ITDCLNDH 370


>sp|AROA_SACI2|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 IVNCLKDH 8
I +CL DH
Sbjct: 363 ITDCLNDH 370


>sp|AROA_SACI1|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain

Query: 1 IVNCLKDH 8
I +CL DH
Sbjct: 363 ITDCLNDH 370


>sp|AROA_SACS2|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 IVNCLKDH 8
+ +CL DH
Sbjct: 363 VTDCLNDH 370


>sp|CDC61_HALSA|ORC1-TYPE DNA replication protein 1|Halobacterium salinarum (strain ATCC

Query: 2 VNCLKDH 8
VNC +DH
Sbjct: 76 VNCWEDH 82


>sp|MTBC2_METAC|DIMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IVNCLKDHV 9
IV+C KD V
Sbjct: 15 IVSCKKDRV 23


>sp|ILVC_UNCAG|KETOL-ACID reductoisomerase (NAD(+))|Uncultured archaeon GZfos26G2

Query: 3 NCLKD 7
NCLKD
Sbjct: 33 NCLKD 37


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 1 IVNCLK 6
IVNC+K
Sbjct: 367 IVNCIK 372


>sp|CMR1_SACS2|CRISPR system CMR subunit Cmr1|Saccharolobus solfataricus (strain ATCC

Query: 3 NCLKD 7
NCLKD
Sbjct: 364 NCLKD 368


>sp|Y2020_ARCFU|UNCHARACTERIZED protein AF_2020|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CLKDHVT 10
C KDH T
Sbjct: 67 CAKDHYT 73


>sp|HYPA_META3|HYDROGENASE maturation factor HypA|Methanococcus aeolicus (strain ATCC

Query: 1 IVNCLKDHVT 10
IVN + +H+T
Sbjct: 10 IVNAIMEHIT 19


>sp|DPCKG_THEVO|GTP-DEPENDENT dephospho-CoA kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IVNCLKDHVT 10
+ + L+DHVT
Sbjct: 148 VTDDLRDHVT 157




108|Sequence|536|545|KDHVTFNNGG

>sp|PAT_SACS2|N-ACETYLTRANSFERASE Pat|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KDHVTF 6
+DHVTF
Sbjct: 52 EDHVTF 57


>sp|SURE_METS3|5'-NUCLEOTIDASE SurE|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KDHVTFNNG 9
+D++ F NG
Sbjct: 133 RDYIKFENG 141


>sp|Y811_METJA|UNCHARACTERIZED protein MJ0811|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KDHVTFNNG 9
K+H TF N
Sbjct: 361 KEHETFKNA 369


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 3 HVTFNNGG 10
HV F+N G
Sbjct: 102 HVRFDNSG 109




109|Sequence|541|550|FNNGGLNRPN

>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 FNNGGLNRPN 10
F GGL RPN
Sbjct: 95 FYLGGLPRPN 104


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FNNGGLNRPN 10
F GGL RPN
Sbjct: 95 FYLGGLPRPN 104


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FNNGGLNRPN 10
F GGL RPN
Sbjct: 95 FYLGGLPRPN 104


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 1 FNNGGLNRPN 10
F GGL RPN
Sbjct: 95 FYIGGLPRPN 104


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 GGLNRPN 10
GGL RPN
Sbjct: 98 GGLPRPN 104


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 GGLNRPN 10
GGL RPN
Sbjct: 97 GGLPRPN 103


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FNNGGLNRP 9
F+N L+RP
Sbjct: 369 FDNSSLHRP 377


>sp|IF6_ARCFU|TRANSLATION initiation factor 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NNGGLNRPN 10
N GGL PN
Sbjct: 147 NRGGLANPN 155


>sp|RL15E_SULAC|LARGE ribosomal subunit protein eL15|Sulfolobus acidocaldarius (strain

Query: 4 GGLNRP 9
GGLN+P
Sbjct: 69 GGLNKP 74


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GGLNRPN 10
GGLN P+
Sbjct: 240 GGLNNPH 246


>sp|RL15E_SACS2|LARGE ribosomal subunit protein eL15|Saccharolobus solfataricus (strain

Query: 4 GGLNRP 9
GGLN+P
Sbjct: 69 GGLNKP 74


>sp|RL15E_SULTO|LARGE ribosomal subunit protein eL15|Sulfurisphaera tokodaii (strain

Query: 4 GGLNRP 9
GGLN+P
Sbjct: 68 GGLNKP 73




110|Sequence|546|555|LNRPNYLSKL

>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 1 LNRPNYLSKL 10
LN PNY+SK+
Sbjct: 433 LNIPNYISKV 442


>sp|Y049_PYRAE|UNCHARACTERIZED serpin-like protein PAE0049|Pyrobaculum aerophilum (strain ATCC

Query: 3 RPNYLSKL 10
+PNYL+KL
Sbjct: 98 KPNYLNKL 105


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NRPNYLS 8
NRP+YLS
Sbjct: 54 NRPDYLS 60


>sp|SYT_CENSY|THREONINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 LNRPNYLSK 9
LN P YLSK
Sbjct: 601 LNSPFYLSK 609


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 3 RPNYLSK 9
RP YLSK
Sbjct: 458 RPEYLSK 464


>sp|MOAA_THEAC|PROBABLE GTP 3',8-cyclase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NRPNYLSK 9
NRP YL K
Sbjct: 226 NRPRYLMK 233


>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 2 NRPNYLSKL 10
N PNY S+L
Sbjct: 184 NYPNYSSEL 192


>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LNRPNYLSKL 10
L RP YL +L
Sbjct: 306 LRRPTYLFRL 315




111|Sequence|551|560|YLSKLLGKLP

>sp|DPCKG_NATPD|GTP-DEPENDENT dephospho-CoA kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LSKLLGKLP 10
+SK+L KLP
Sbjct: 1 MSKILAKLP 9


>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 1 YLSKLLGK 8
YLSK LGK
Sbjct: 121 YLSKRLGK 128


>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 2 LSKLLGKLP 10
LSKL+G+ P
Sbjct: 482 LSKLIGRGP 490


>sp|PGK_ARCFU|PHOSPHOGLYCERATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LSKLLGK 8
LSKLLGK
Sbjct: 79 LSKLLGK 85


>sp|YPZ11_METTF|UNCHARACTERIZED protein ORF11'|Methanothermobacter thermautotrophicus

Query: 2 LSKLLGKLP 10
+S LLGK+P
Sbjct: 90 VSILLGKIP 98


>sp|COFE_METMP|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain DSM

Query: 2 LSKLLGKLP 10
LSK LGK P
Sbjct: 70 LSKKLGKEP 78


>sp|COFE_METM7|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LSKLLGKLP 10
LSK LGK P
Sbjct: 70 LSKKLGKEP 78


>sp|COFE_METM6|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C6 /

Query: 2 LSKLLGKLP 10
LSK LGK P
Sbjct: 70 LSKKLGKEP 78


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 YLSKLLGKL 9
YL +LGKL
Sbjct: 779 YLKDILGKL 787


>sp|CCA_PICTO|CCA-ADDING enzyme|Picrophilus torridus (strain ATCC 700027

Query: 1 YLSKLLGKL 9
Y SKL G+L
Sbjct: 194 YFSKLKGRL 202




112|Sequence|556|565|LGKLPELRTL

>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GKLPELRTL 10
G +PELRT+
Sbjct: 161 GNMPELRTI 169


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 2 GKLPELRTL 10
GK+PELR +
Sbjct: 161 GKIPELRAI 169


>sp|KDPA_THEVO|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Thermoplasma volcanium (strain

Query: 1 LGKLPELRTL 10
+GKLPEL +L
Sbjct: 416 VGKLPELMSL 425


>sp|KDPA_THEAC|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Thermoplasma acidophilum (strain

Query: 1 LGKLPELRTL 10
+GKLPE+ +L
Sbjct: 416 VGKLPEIMSL 425


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GKLPELR 8
GKLPELR
Sbjct: 140 GKLPELR 146


>sp|MTIP_METAC|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanosarcina acetivorans

Query: 1 LGKLPELR 8
+GK+PE R
Sbjct: 238 IGKIPETR 245


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GKLPELRT 9
G LPE+R+
Sbjct: 100 GNLPEIRS 107


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LGKLPELRT 9
LGK PE R+
Sbjct: 34 LGKHPEFRS 42


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GKLPELR 8
G+LPE+R
Sbjct: 100 GELPEIR 106


>sp|DGGGP_THEKO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GKLPELRT 9
G LPEL+T
Sbjct: 31 GGLPELKT 38


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 GKLPELRT 9
G PELRT
Sbjct: 182 GSTPELRT 189


>sp|RS13_METTP|SMALL ribosomal subunit protein uS13|Methanothrix thermoacetophila

Query: 1 LGKLPE 6
LGKLPE
Sbjct: 59 LGKLPE 64


>sp|SERC_METAC|PHOSPHOSERINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GKLPELRTL 10
GKLP+L+ +
Sbjct: 122 GKLPDLKKV 130


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LGKLPELRT 9
LG+ PELR+
Sbjct: 32 LGENPELRS 40


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 LGKLPELRTL 10
GKL EL+T+
Sbjct: 491 FGKLDELKTV 500


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 2 GKLPELRTL 10
G +PE+RT+
Sbjct: 135 GPVPEVRTV 143


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 3 KLPELRTL 10
+LPELR L
Sbjct: 527 RLPELRDL 534


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 2 GKLPEL 7
GKLPEL
Sbjct: 365 GKLPEL 370


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 LGKLPEL 7
+GKLPE+
Sbjct: 501 VGKLPEI 507


>sp|SERC_METBF|PHOSPHOSERINE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GKLPELRTL 10
GKLP+L+ +
Sbjct: 122 GKLPDLKKV 130




113|Sequence|561|570|ELRTLCTQGL

>sp|THIE_METHJ|THIAMINE-PHOSPHATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ELRTLCTQ 8
E+R+LCTQ
Sbjct: 52 EIRSLCTQ 59


>sp|G3P_METS5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LRTLCT 7
LRTLCT
Sbjct: 145 LRTLCT 150


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 RTLCTQ 8
RT+CTQ
Sbjct: 6 RTMCTQ 11


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ELRTLCTQGL 10
E RTL QGL
Sbjct: 194 EFRTLREQGL 203


>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LRTLCTQ 8
+RTLC+Q
Sbjct: 184 VRTLCSQ 190


>sp|TRUB_THEVO|PROBABLE tRNA pseudouridine synthase B|Thermoplasma volcanium (strain ATCC

Query: 2 LRTLCT 7
+RTLCT
Sbjct: 143 IRTLCT 148


>sp|TRUB_THEAC|PROBABLE tRNA pseudouridine synthase B|Thermoplasma acidophilum (strain ATCC

Query: 2 LRTLCT 7
+RTLCT
Sbjct: 141 IRTLCT 146


>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 2 LRTLCT 7
+RTLCT
Sbjct: 139 IRTLCT 144


>sp|G3P_SACS2|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LRTLCT 7
LRT+CT
Sbjct: 145 LRTICT 150


>sp|G3P_SACI7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LRTLCT 7
LRT+CT
Sbjct: 145 LRTICT 150


>sp|G3P_SACI6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LRTLCT 7
LRT+CT
Sbjct: 145 LRTICT 150


>sp|G3P_SACI4|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LRTLCT 7
LRT+CT
Sbjct: 145 LRTICT 150


>sp|G3P_SACI3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 LRTLCT 7
LRT+CT
Sbjct: 145 LRTICT 150


>sp|G3P_SACI2|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LRTLCT 7
LRT+CT
Sbjct: 145 LRTICT 150


>sp|G3P_SACI1|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LRTLCT 7
LRT+CT
Sbjct: 145 LRTICT 150




114|Sequence|566|575|CTQGLQRIFY

>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 3 QGLQRIFY 10
Q LQR++Y
Sbjct: 113 QNLQRMYY 120


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 3 QGLQRIFY 10
Q LQR++Y
Sbjct: 113 QNLQRMYY 120


>sp|Y1225_ARCFU|UNCHARACTERIZED protein AF_1225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CTQGLQRIF 9
CT GL+ ++
Sbjct: 63 CTPGLKEVY 71




115|Sequence|571|580|QRIFYLKLED

>sp|PYRC_METJA|DIHYDROOROTASE jannaschii (strain ATCC 43067

Query: 1 QRIFYLKLED 10
+ +FY KLED
Sbjct: 97 KELFYKKLED 106


>sp|Y1560_METJA|UNCHARACTERIZED MFS-type transporter MJ1560|Methanocaldococcus jannaschii (strain

Query: 3 IFYLKLED 10
I Y+KLED
Sbjct: 176 ISYMKLED 183


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 2 RIFYLKL 8
R+FYLK+
Sbjct: 183 RVFYLKV 189


>sp|GATD_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 QRIFYLKLED 10
+RIF +KL++
Sbjct: 45 ERIFVIKLDN 54


>sp|RSMA_THESM|PROBABLE ribosomal RNA small subunit|Thermococcus sibiricus (strain DSM

Query: 1 QRIFYLKLED 10
+R+F L +ED
Sbjct: 249 KRVFQLSIED 258


>sp|GATD_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 QRIFYLKLED 10
+RIF +KL++
Sbjct: 45 ERIFVIKLDN 54


>sp|GATD_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 QRIFYLKLED 10
+RIF +KL++
Sbjct: 45 ERIFVIKLDN 54


>sp|GATD_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 QRIFYLKLED 10
+RIF +KL++
Sbjct: 45 ERIFVIKLDN 54


>sp|GATD_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 QRIFYLKLED 10
+RIF +KL++
Sbjct: 45 ERIFVIKLDN 54


>sp|GATD_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 QRIFYLKLED 10
+RIF +KL++
Sbjct: 45 ERIFVIKLDN 54


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 YLKLED 10
YLKLED
Sbjct: 676 YLKLED 681




116|Sequence|576|585|LKLEDLVPPP

>sp|RS11_METS3|SMALL ribosomal subunit protein uS11|Methanobrevibacter smithii (strain

Query: 2 KLEDLVPPP 10
K+ED+ P P
Sbjct: 107 KIEDITPIP 115


>sp|RS11_METST|SMALL ribosomal subunit protein uS11|Methanosphaera stadtmanae (strain

Query: 2 KLEDLVPPP 10
K+ED+ P P
Sbjct: 107 KIEDVTPIP 115


>sp|GATA_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Haloarcula marismortui (strain ATCC

Query: 3 LEDLVPP 9
LED VPP
Sbjct: 46 LEDYVPP 52


>sp|GATA_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 3 LEDLVPP 9
LED +PP
Sbjct: 86 LEDYIPP 92


>sp|HEM3_PYRNV|PROBABLE porphobilinogen deaminase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LKLEDLVPPP 10
L +EDL PPP
Sbjct: 186 LAVEDLPPPP 195


>sp|GATA_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Saccharolobus solfataricus (strain

Query: 3 LEDLVPP 9
LED +PP
Sbjct: 89 LEDYIPP 95


>sp|RS19E_ARCFU|SMALL ribosomal subunit protein eS19|Archaeoglobus fulgidus (strain

Query: 2 KLEDLVPPP 10
+L+D+V PP
Sbjct: 19 RLKDMVAPP 27


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro

Query: 3 LEDLVPP 9
LED +PP
Sbjct: 86 LEDYIPP 92


>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 3 LEDLVPPP 10
+EDL+P P
Sbjct: 195 IEDLMPTP 202


>sp|GATA_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfurisphaera tokodaii (strain DSM

Query: 3 LEDLVPP 9
LED VPP
Sbjct: 86 LEDYVPP 92


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LKLEDLVPPP 10
L+LEDL+ P
Sbjct: 265 LRLEDLIEMP 274


>sp|MVHB_METTH|POLYFERREDOXIN protein MvhB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LKLEDLV 7
LKLEDLV
Sbjct: 52 LKLEDLV 58


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 EDLVPP 9
ED+VPP
Sbjct: 51 EDMVPP 56


>sp|Y994_METTH|PUTATIVE aminohydrolase MTH_994|Methanothermobacter thermautotrophicus

Query: 3 LEDLVPPP 10
LED+V PP
Sbjct: 77 LEDIVRPP 84


>sp|TRPB2_PYRFU|TRYPTOPHAN synthase beta chain 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KLEDLVPPP 10
KLE +VP P
Sbjct: 372 KLEGIVPAP 380


>sp|RS11_METTH|SMALL ribosomal subunit protein uS11|Methanothermobacter

Query: 2 KLEDLVPPP 10
K+ED+ P P
Sbjct: 107 KIEDVTPIP 115


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LKLEDLV 7
+KLEDLV
Sbjct: 158 IKLEDLV 164


>sp|XAD_HALVD|D-XYLONATE dehydratase|Haloferax volcanii (strain ATCC 29605

Query: 3 LEDLVPP 9
LED VPP
Sbjct: 255 LEDPVPP 261




117|Sequence|581|590|LVPPPAIIDK

>sp|TDXH1_SULTO|PEROXIREDOXIN 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LVPPPAIIDK 10
+VPPPAI D+
Sbjct: 177 IVPPPAIFDE 186


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 LVPPPA 6
LVPPPA
Sbjct: 111 LVPPPA 116


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LVPPPA 6
LVPPPA
Sbjct: 96 LVPPPA 101


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LVPPPA 6
LVPPPA
Sbjct: 112 LVPPPA 117


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LVPPPA 6
LVPPPA
Sbjct: 112 LVPPPA 117


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LVPPPA 6
LVPPPA
Sbjct: 112 LVPPPA 117


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LVPPPA 6
LVPPPA
Sbjct: 112 LVPPPA 117


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LVPPPA 6
LVPPPA
Sbjct: 112 LVPPPA 117


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LVPPPA 6
LVPPPA
Sbjct: 107 LVPPPA 112


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LVPPPA 6
LVPPPA
Sbjct: 112 LVPPPA 117


>sp|Y2097_ARCFU|PUTATIVE nickel insertion protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VPPPAIID 9
VPPPA+++
Sbjct: 164 VPPPAVLE 171


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 1 LVPPPAIIDK 10
L PPPA+ +K
Sbjct: 5 LGPPPAMAEK 14


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LVPPPA 6
+VPPPA
Sbjct: 105 IVPPPA 110


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LVPPPA 6
+VPPPA
Sbjct: 111 IVPPPA 116


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LVPPPA 6
+VPPPA
Sbjct: 113 IVPPPA 118


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LVPPPAIIDK 10
L PP I+DK
Sbjct: 31 LSTPPEILDK 40


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LVPPPA 6
+VPPPA
Sbjct: 109 VVPPPA 114


>sp|MTBC3_METAC|DIMETHYLAMINE corrinoid protein 3|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VPPPAIIDK 10
VPP II+K
Sbjct: 34 VPPEEIIEK 42


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LVPPPA 6
+VPPPA
Sbjct: 109 VVPPPA 114


>sp|TDXH2_SULME|PEROXIREDOXIN 2|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 1 LVPPPAIIDK 10
+VPPP + D+
Sbjct: 176 IVPPPNVFDE 185


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 1 LVPPPAI 7
+VPPP +
Sbjct: 116 IVPPPTV 122


>sp|MFNA_METKA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanopyrus kandleri (strain

Query: 1 LVPPPA 6
LVPPPA
Sbjct: 218 LVPPPA 223


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 4 PPAIIDK 10
PP +IDK
Sbjct: 40 PPEVIDK 46


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 LVPPPA 6
+VPPPA
Sbjct: 109 VVPPPA 114


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LVPPPA 6
+VPPPA
Sbjct: 114 VVPPPA 119


>sp|RNP3_PYRFU|RIBONUCLEASE P protein component 3|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PPAIIDK 10
PP ++DK
Sbjct: 38 PPGVLDK 44


>sp|TAL_METJA|PROBABLE transaldolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PPAIIDK 10
PPA++DK
Sbjct: 185 PPAVMDK 191


>sp|GGGPS_METPE|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaerula palustris (strain ATCC

Query: 4 PPAIIDK 10
PPA+ID+
Sbjct: 21 PPAVIDE 27


>sp|Y153_THEVO|UPF0284 protein TV0153|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VPPPAIIDK 10
+P PAI+ K
Sbjct: 76 IPTPAIVTK 84


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 PPAIIDK 10
PP IIDK
Sbjct: 36 PPEIIDK 42


>sp|HISX_SULTO|HISTIDINOL dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PPAIID 9
PPAIID
Sbjct: 322 PPAIID 327


>sp|HISX_SACS2|HISTIDINOL dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PPAIID 9
PPAIID
Sbjct: 326 PPAIID 331


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 4 PPAIIDK 10
PP IIDK
Sbjct: 37 PPEIIDK 43


>sp|COABC_THEKO|COENZYME A biosynthesis bifunctional protein|Thermococcus kodakarensis

Query: 1 LVPPPAIIDK 10
L P P IID+
Sbjct: 308 LEPTPKIIDR 317


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 PPAIIDK 10
PP IIDK
Sbjct: 34 PPEIIDK 40


>sp|DCD_PYRAE|DCTP deaminase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LVPPPAIID 9
LV PP I+D
Sbjct: 107 LVIPPTIVD 115




118|Sequence|586|598|AIIDKLFLDTLPF

>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 1 AIIDKLFLDTLPF 13
A I K FLD PF
Sbjct: 21 AEIRKRFLDEKPF 33


>sp|AROA_METB6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoregula boonei (strain DSM 21154

Query: 4 DKLFLDTL 11
D+LFLD L
Sbjct: 269 DRLFLDAL 276


>sp|TRPF_META3|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IIDKLFLDT 10
I+DK+ LDT
Sbjct: 128 IVDKILLDT 136


>sp|RADA_AERPX|DNA repair and recombination protein|Aeropyrum pernix

Query: 1 AIIDKLF 7
AI+DKLF
Sbjct: 186 AIVDKLF 192


>sp|RADA_AERPE|DNA repair and recombination protein|Aeropyrum pernix (strain ATCC

Query: 1 AIIDKLF 7
AI+DKLF
Sbjct: 186 AIVDKLF 192


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 IIDKLFLDTL 11
I+DKL+ D +
Sbjct: 592 IVDKLYFDEI 601


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 5 KLFLDTLP 12
K+F DTLP
Sbjct: 497 KIFKDTLP 504


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IIDKLFLDTLP 12
I+D ++LD P
Sbjct: 103 ILDTVYLDEFP 113


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 KLFLDTLP 12
K+F DTLP
Sbjct: 497 KIFKDTLP 504


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 AIIDKLF 7
AIIDK+F
Sbjct: 617 AIIDKIF 623


>sp|Y2337_ARCFU|UNCHARACTERIZED protein AF_2337|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IDKLFLDTLP 12
+DK DTLP
Sbjct: 22 VDKFLNDTLP 31


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IIDKLFLDTL 11
IID+L DTL
Sbjct: 610 IIDRLGADTL 619


>sp|DAPA_METS3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 IIDKLFLDTLP 12
+ID LF+++ P
Sbjct: 245 VIDALFIESNP 255


>sp|RIFK_PYRIL|RIBOFLAVIN kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AIIDKLFLDTLP 12
+++ K +LD+LP
Sbjct: 129 SVVYKRYLDSLP 140


>sp|TRPF_THEKO|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IDKLFLDT 10
+DK+ LDT
Sbjct: 129 VDKILLDT 136


>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 DKLFLDTL 11
DKLFLD +
Sbjct: 213 DKLFLDDI 220


>sp|DPCKG_METKA|GTP-DEPENDENT dephospho-CoA kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 AIIDKLFLDTLP 12
A++D+ L T+P
Sbjct: 62 AVVDRKMLRTVP 73


>sp|TRPF2_METMA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AIIDKLFLDTL 11
+++D LDTL
Sbjct: 124 SVVDAFILDTL 134


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 IIDKLFLD 9
II+KLF+D
Sbjct: 493 IIEKLFVD 500


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM

Query: 2 IIDKLFLDTLP 12
+I+KL+L P
Sbjct: 88 VIEKLYLSDFP 98


>sp|DTDA_METHJ|D-AMINOACYL-TRNA deacylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AIIDKLFLDT 10
A++D L +DT
Sbjct: 166 AVLDALLMDT 175


>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IIDKLFLDTLPF 13
I D FL+TLP
Sbjct: 153 ISDLNFLETLPL 164


>sp|AROB_SACS2|3-DEHYDROQUINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IIDKLFLDTLP 12
I D FL+TLP
Sbjct: 154 ISDLEFLETLP 164






THE END