1|SequenceR|10|1|RWVLEYLGTM
>sp|VP27_HIS1I|STRUCTURAL protein 27|His1 virus (isolate Australia/Victoria) (His1V)
Query: 2 WVLEYLG 8
WVLEY+G
Sbjct: 465 WVLEYIG 471
>sp|NCAP_CVPRM|NUCLEOPROTEIN respiratory coronavirus (strain RM4)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 89 RWFFYYLGT 97
>sp|NCAP_CVPR8|NUCLEOPROTEIN respiratory coronavirus (strain 86/137004
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 89 RWFFYYLGT 97
>sp|NCAP_CVPPU|NUCLEOPROTEIN transmissible gastroenteritis coronavirus (strain
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 89 RWFFYYLGT 97
>sp|NCAP_CVPFS|NUCLEOPROTEIN transmissible gastroenteritis coronavirus (strain
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 89 RWFFYYLGT 97
>sp|NCAP_CVCBG|NUCLEOPROTEIN coronavirus (strain BGF10) (CCoV)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 89 RWFFYYLGT 97
>sp|NCAP_CVCAK|NUCLEOPROTEIN coronavirus (strain K378) (CCoV)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 89 RWFFYYLGT 97
>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 107 RWYFYYLGT 115
>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 108 RWYFYYLGT 116
>sp|NCAP_CVRSD|NUCLEOPROTEIN coronavirus (strain 681) (RCV-SDAV)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 125 RWYFYYLGT 133
>sp|NCAP_CVRNJ|NUCLEOPROTEIN coronavirus (strain NJ) (RCV-NJ)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 125 RWYFYYLGT 133
>sp|NCAP_CVPV|NUCLEOPROTEIN coronavirus (PV) (Puffinosis virus)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 125 RWYFYYLGT 133
>sp|NCAP_CVPIA|NUCLEOPROTEIN hemagglutinating encephalomyelitis virus (strain
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 122 RWYFYYLGT 130
>sp|NCAP_CVP67|NUCLEOPROTEIN hemagglutinating encephalomyelitis virus (strain
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 122 RWYFYYLGT 130
>sp|NCAP_CVMS|NUCLEOPROTEIN coronavirus (strain S) (MHV-S)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 125 RWYFYYLGT 133
>sp|NCAP_CVMJH|NUCLEOPROTEIN coronavirus (strain JHM) (MHV-JHM)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 125 RWYFYYLGT 133
>sp|NCAP_CVMDV|NUCLEOPROTEIN coronavirus (strain DVIM) (MHV-DVIM)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 125 RWYFYYLGT 133
>sp|NCAP_CVMA5|NUCLEOPROTEIN coronavirus (strain A59) (MHV-A59)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 125 RWYFYYLGT 133
>sp|NCAP_CVM3|NUCLEOPROTEIN coronavirus (strain 3) (MHV-3)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 125 RWYFYYLGT 133
>sp|NCAP_CVM2|NUCLEOPROTEIN coronavirus (strain 2) (MHV-2)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 121 RWYFYYLGT 129
>sp|NCAP_CVM1|NUCLEOPROTEIN coronavirus (strain 1) (MHV-1)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 125 RWYFYYLGT 133
>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 122 RWYFYYLGT 130
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 121 RWYFYYLGT 129
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 121 RWYFYYLGT 129
>sp|NCAP_CVHN1|NUCLEOPROTEIN coronavirus HKU1 (isolate N1)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 121 RWYFYYLGT 129
>sp|NCAP_CVEN9|NUCLEOPROTEIN coronavirus (isolate NC99) (ECoV)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 121 RWYFYYLGT 129
>sp|NCAP_CVBQ|NUCLEOPROTEIN coronavirus (strain Quebec) (BCoV)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 122 RWYFYYLGT 130
>sp|NCAP_CVBOK|NUCLEOPROTEIN coronavirus (strain OK-0514) (BCoV)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 122 RWYFYYLGT 130
>sp|NCAP_CVBM|NUCLEOPROTEIN coronavirus (strain Mebus) (BCoV)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 122 RWYFYYLGT 130
>sp|NCAP_CVBLY|NUCLEOPROTEIN coronavirus (strain LY-138) (BCoV)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 122 RWYFYYLGT 130
>sp|NCAP_CVBLU|NUCLEOPROTEIN coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 122 RWYFYYLGT 130
>sp|NCAP_CVBLS|NUCLEOPROTEIN coronavirus (strain LSU-94LSS-051) (BCoV-LSU)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 122 RWYFYYLGT 130
>sp|NCAP_CVBF|NUCLEOPROTEIN coronavirus (strain F15) (BCoV)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 122 RWYFYYLGT 130
>sp|NCAP_CVBEN|NUCLEOPROTEIN coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 122 RWYFYYLGT 130
>sp|NCAP_BCRP3|NUCLEOPROTEIN coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 107 RWYFYYLGT 115
>sp|NCAP_BCHK3|NUCLEOPROTEIN coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 107 RWYFYYLGT 115
>sp|NCAP_BC279|NUCLEOPROTEIN coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 1 RWVLEYLGT 9
RW YLGT
Sbjct: 107 RWYFYYLGT 115
>sp|VP2_POVBO|MINOR capsid protein VP2|Bovine polyomavirus (BPyV) (Bos taurus
Query: 1 RWVLEYLGT 9
RW + +LGT
Sbjct: 204 RWTVSHLGT 212
>sp|NCAP_CVCAI|NUCLEOPROTEIN coronavirus (strain Insavc-1) (CCoV)
Query: 1 RWVLEYLGT 9
+W YLGT
Sbjct: 89 KWFFYYLGT 97
>sp|Y7_BPT7|PROTEIN 7|Escherichia phage T7 (Bacteriophage T7)
Query: 1 RWVLEYLG 8
RW +E+LG
Sbjct: 17 RWTVEHLG 24
>sp|NCAP_FIPV|NUCLEOPROTEIN coronavirus (strain FIPV WSU-79/1146)
Query: 1 RWVLEYLGT 9
RW +LGT
Sbjct: 89 RWFFYFLGT 97
>sp|RDRP_P1AMV|RNA replication protein|Plantago asiatica mosaic potexvirus (P1AMV)
Query: 1 RWVLEY 6
RWVL Y
Sbjct: 1154 RWVLNY 1159
>sp|PP220_ASFM2|POLYPROTEIN pp220|African swine fever virus (isolate
Query: 2 WVLEYLG 8
W+++Y+G
Sbjct: 1273 WIVQYVG 1279
>sp|MCP_ALHV1|MAJOR capsid protein|Alcelaphine herpesvirus 1 (strain C500)
Query: 3 VLEYLGTM 10
+LEY+GT+
Sbjct: 150 MLEYIGTV 157
2|SequenceR|15|6|LAHLVRWVLE
>sp|NCAP_BUNSH|NUCLEOPROTEIN snowshoe hare
Query: 2 AHLVRWVLE 10
+L RWVLE
Sbjct: 97 GYLARWVLE 105
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 AHLVRW 7
AHL+RW
Sbjct: 795 AHLLRW 800
>sp|VE1_BPV5|REPLICATION protein E1|Bovine papillomavirus type 5
Query: 1 LAHLVRWVLE 10
+H+V+W L+
Sbjct: 332 FSHMVQWALD 341
>sp|POLG_BVY3|GENOME polyprotein|Blackberry virus Y (isolate Blackberry
Query: 1 LAHLVRWVL 9
L HL WVL
Sbjct: 994 LRHLATWVL 1002
>sp|TEG3_PSHV1|TEGUMENT protein UL14|Psittacid herpesvirus 1 (isolate Amazon
Query: 4 LVRWVLE 10
LVRW LE
Sbjct: 153 LVRWQLE 159
>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)
Query: 1 LAHLVRWVLE 10
L L RWV+E
Sbjct: 1734 LEELNRWVIE 1743
>sp|GLYC_OLVVA|PRE-GLYCOPROTEIN polyprotein GP complex|Oliveros mammarenavirus (isolate
Query: 3 HLVRWVLE 10
HL++W++E
Sbjct: 144 HLMKWLIE 151
>sp|M2_I30A0|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|POL_CYLCV|ENZYMATIC polyprotein|Cestrum yellow leaf curling virus
Query: 4 LVRWVLE 10
LVRW LE
Sbjct: 608 LVRWQLE 614
>sp|VG65_ICHVA|UNCHARACTERIZED protein ORF65|Ictalurid herpesvirus 1 (strain Auburn)
Query: 4 LVRWVLE 10
L+ WVLE
Sbjct: 224 LIEWVLE 230
>sp|VP2_AHSV3|OUTER capsid protein VP2|African horse sickness virus 3
Query: 1 LAHLVRWVLE 10
+AH V WV++
Sbjct: 425 VAHWVDWVVD 434
>sp|M2_I34A1|MATRIX protein 2|Influenza A virus (strain A/Puerto
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I02A1|MATRIX protein 2|Influenza A virus (strain A/Guinea
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 28 ILHLILWILD 37
>sp|M2_I59A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I35A3|MATRIX protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I61A1|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I89A7|MATRIX protein 2|Influenza A virus (strain A/Equine/Jillin/1/1989
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I86A3|MATRIX protein 2|Influenza A virus (strain A/Equine/Tennessee/5/1986
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I88A5|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I78AC|MATRIX protein 2|Influenza A virus (strain A/Turkey/Minnesota/501/1978
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I66A1|MATRIX protein 2|Influenza A virus (strain A/Turkey/Wisconsin/1/1966
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I85A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I33A0|MATRIX protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I02A4|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I02A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I81A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I77AG|MATRIX protein 2|Influenza A virus (strain A/Budgerigar/Hokkaido/1/1977
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I57A1|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|NSP1_ROTRA|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Rabbit/United
Query: 1 LAHLVRWVLE 10
LAH+ +W ++
Sbjct: 59 LAHVCQWCIQ 68
>sp|M2_I80A8|MATRIX protein 2|Influenza A virus (strain A/Turkey/Minnesota/833/1980
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I80A6|MATRIX protein 2|Influenza A virus (strain A/Duck/Hokkaido/8/1980
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I79A7|MATRIX protein 2|Influenza A virus (strain A/Grey
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I78A3|MATRIX protein 2|Influenza A virus (strain A/Mallard/New
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I77A9|MATRIX protein 2|Influenza A virus (strain A/Equine/New
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I77A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I71A2|MATRIX protein 2|Influenza A virus (strain A/Turkey/Oregon/1971
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I57A0|MATRIX protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I91A0|MATRIX protein 2|Influenza A virus (strain A/Equine/Alaska/1/1991
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I81A2|MATRIX protein 2|Influenza A virus (strain A/Equine/Kentucky/1/1981)
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I79A6|MATRIX protein 2|Influenza A virus (strain A/Equine/New
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I57A3|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I57A2|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I36A0|MATRIX protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I88A7|MATRIX protein 2|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I68A3|MATRIX protein 2|Influenza A virus (strain A/Turkey/Ontario/6118/1968
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I18A0|MATRIX protein 2|Influenza A virus (strain A/Brevig
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I97A1|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I97A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I49A1|MATRIX protein 2|Influenza A virus (strain A/Duck/Germany/1949
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|M2_I02A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 LAHLVRWVLE 10
+ HL+ W+L+
Sbjct: 35 ILHLILWILD 44
>sp|NSP1_ROTRH|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Monkey/United
Query: 1 LAHLVRWVLE 10
LAH+ +W ++
Sbjct: 61 LAHVCQWCIQ 70
3|SequenceR|20|11|RHLCLLAHLV
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 RHLCLLAHLV 10
RH C LAH V
Sbjct: 441 RHTCRLAHKV 450
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 RHLCLLAHLV 10
+H+C +AH V
Sbjct: 443 KHMCTIAHKV 452
>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)
Query: 1 RHLCLLAHL 9
RHLC+L+ L
Sbjct: 1610 RHLCILSDL 1618
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 RHLCLLAHLV 10
+H+C +AH V
Sbjct: 443 KHMCTIAHKV 452
>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)
Query: 1 RHLCLLAHL 9
RHLC+L+ L
Sbjct: 1610 RHLCVLSDL 1618
>sp|CAPSD_TTVE1|CAPSID protein|Torque teno tamarin virus (isolate
Query: 1 RHLCLLAHL 9
RH LLAHL
Sbjct: 690 RHRLLLAHL 698
>sp|Y024_NPVOP|UNCHARACTERIZED 18.4 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 RHLCLLAHLV 10
RHLC L +LV
Sbjct: 152 RHLCALEYLV 161
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 RHLCLLAHL 9
+HLC+LA L
Sbjct: 1610 KHLCVLADL 1618
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 RHLCLLAHL 9
+HLC+LA L
Sbjct: 1610 KHLCVLADL 1618
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 RHLCLLAHLV 10
RH C +AH V
Sbjct: 442 RHTCTVAHKV 451
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 RHLCLLAHLV 10
RH C +AH V
Sbjct: 443 RHTCTVAHKV 452
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 RHLCLLAHL 9
+HLC+LA L
Sbjct: 1610 KHLCVLADL 1618
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 RHLCLLAH 8
RH C+LA+
Sbjct: 580 RHFCVLAN 587
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 RHLCLLA 7
RH C+LA
Sbjct: 580 RHFCVLA 586
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 1 RHLCLLA 7
RH C+LA
Sbjct: 580 RHFCVLA 586
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 1 RHLCLLA 7
RH C+LA
Sbjct: 580 RHFCVLA 586
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 RHLCLLA 7
RH C+LA
Sbjct: 580 RHFCVLA 586
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 RHLCLLA 7
RH C+LA
Sbjct: 580 RHFCVLA 586
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 2 HLCLLAHL 9
H CLL H+
Sbjct: 254 HTCLLCHI 261
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 LCLLAHLV 10
+C+L HLV
Sbjct: 1797 MCVLTHLV 1804
>sp|ORF3_TTVD1|UNCHARACTERIZED ORF3 protein|Torque teno tupaia virus (isolate
Query: 2 HLCLLAH 8
H CLL+H
Sbjct: 9 HSCLLSH 15
>sp|ORF2_TTVD1|UNCHARACTERIZED ORF2 protein|Torque teno tupaia virus (isolate
Query: 2 HLCLLAH 8
H CLL+H
Sbjct: 9 HSCLLSH 15
>sp|ENV_MLVMS|ENVELOPE glycoprotein|Moloney murine leukemia virus (isolate
Query: 3 LCLLAH 8
LC+LAH
Sbjct: 78 LCMLAH 83
>sp|Y068_OSHVF|PUTATIVE transmembrane protein ORF68|Ostreid herpesvirus 1 (isolate France)
Query: 1 RHLCLLAHLV 10
+H+C LA +V
Sbjct: 181 KHICQLADVV 190
>sp|KCV_PBCV1|POTASSIUM channel protein kcv|Paramecium bursaria Chlorella virus 1
Query: 3 LCLLAHLV 10
LC +AH+V
Sbjct: 78 LCTIAHIV 85
4|SequenceR|25|16|WSTLTRHLCL
>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 1 WSTLTRHLCL 10
W+ L R +CL
Sbjct: 3743 WNPLVRRICL 3752
>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 1 WSTLTRHLCL 10
W+ L R +CL
Sbjct: 3734 WNPLVRRICL 3743
>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate
Query: 1 WSTLTRHLCL 10
W+ L R +CL
Sbjct: 3824 WNPLVRRICL 3833
>sp|CAPSP_ADES1|PENTON protein|Snake adenovirus serotype 1 (SnAdV-1)
Query: 1 WSTLTRHLCL 10
W TL R CL
Sbjct: 279 WQTLYRSWCL 288
>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain
Query: 1 WSTLTRHLCL 10
W+ L R +CL
Sbjct: 3735 WNPLIRRICL 3744
>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain
Query: 1 WSTLTRHLCL 10
W+ L R +CL
Sbjct: 3735 WNPLIRRICL 3744
>sp|ENV_MLVHO|ENVELOPE glycoprotein|Hortulanus murine leukemia virus (HoMuLV)
Query: 1 WSTLTRHLCL 10
W TLT LC+
Sbjct: 68 WPTLTPDLCM 77
>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate
Query: 2 STLTRHLCL 10
++LT+H CL
Sbjct: 744 TSLTKHRCL 752
>sp|LEF2_NPVAC|PRIMASE-ASSOCIATED factor LEF-2|Autographa californica nuclear polyhedrosis virus
Query: 1 WSTLTRHLCL 10
WS L R CL
Sbjct: 9 WSPLIRASCL 18
>sp|YR198_MIMIV|UNCHARACTERIZED protein R198|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 WSTLTRHL 8
WST T HL
Sbjct: 46 WSTNTYHL 53
>sp|P2A_CFMVN|POLYPROTEIN P2A|Cocksfoot mottle virus (isolate Dactylis
Query: 1 WSTLTRHLC 9
W T HLC
Sbjct: 178 WETNISHLC 186
>sp|GH_MEHV1|ENVELOPE glycoprotein H|Meleagrid herpesvirus 1 (MeHV-1) (Turkey
Query: 1 WSTLTRH 7
W+T T+H
Sbjct: 460 WNTTTKH 466
>sp|VK02_SWPVK|G-PROTEIN coupled receptor homolog K2|Swinepox virus (strain Kasza) (SWPV)
Query: 2 STLTRHLCL 10
S + RHLCL
Sbjct: 296 SNIFRHLCL 304
>sp|RDRP_CFMVN|REPLICASE polyprotein P2AB|Cocksfoot mottle virus (isolate Dactylis
Query: 1 WSTLTRHLC 9
W T HLC
Sbjct: 178 WETNISHLC 186
5|SequenceR|30|21|FRVRLWSTLT
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 VRLWSTLT 10
VRLWS LT
Sbjct: 668 VRLWSQLT 675
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 3 VRLWSTLT 10
VRLWS LT
Sbjct: 668 VRLWSQLT 675
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 3 VRLWSTLT 10
VRLW+ LT
Sbjct: 335 VRLWAXLT 342
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 VRLWSTLT 10
VRLW+ LT
Sbjct: 667 VRLWAQLT 674
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 VRLWSTLT 10
VRLW+ LT
Sbjct: 669 VRLWAQLT 676
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 VRLWSTLT 10
VRLW+ LT
Sbjct: 669 VRLWAQLT 676
>sp|POLS_MIDDV|STRUCTURAL polyprotein|Middelburg virus
Query: 3 VRLWSTLT 10
VRLW+ LT
Sbjct: 671 VRLWAQLT 678
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 VRLWSTLT 10
VRLW+ LT
Sbjct: 667 VRLWAQLT 674
>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate
Query: 3 VRLWSTLT 10
V+LW TLT
Sbjct: 1037 VKLWYTLT 1044
>sp|ROS_AVISU|TYROSINE-PROTEIN kinase transforming protein ros|UR2 avian sarcoma virus (UR2SV)
Query: 1 FRVRLWSTLT 10
F V +W TLT
Sbjct: 301 FGVLVWETLT 310
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 1 FRVRLWSTLT 10
F R+W TLT
Sbjct: 178 FTYRIWHTLT 187
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 1 FRVRLWSTLT 10
F R+W TLT
Sbjct: 178 FTYRIWHTLT 187
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 4 RLWSTLT 10
R WST+T
Sbjct: 703 RTWSTIT 709
6|SequenceR|35|26|WNWTGFRVRL
>sp|CAPSH_ADECC|HEXON protein|Canine adenovirus serotype 1 (strain
Query: 2 NWTGFR 7
NW GFR
Sbjct: 623 NWAGFR 628
>sp|CAPSH_ADECR|HEXON protein|Canine adenovirus serotype 1 (strain
Query: 2 NWTGFR 7
NW GFR
Sbjct: 623 NWAGFR 628
>sp|CAPSH_BPT6|MAJOR capsid protein|Enterobacteria phage T6 (Bacteriophage T6)
Query: 1 WNWTGFRV 8
WN GFR+
Sbjct: 247 WNEMGFRI 254
>sp|CAPSH_BPT4|MAJOR capsid protein|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 WNWTGFRV 8
WN GFR+
Sbjct: 247 WNEMGFRI 254
>sp|CAPSH_BPAR1|MAJOR capsid protein|Escherichia phage AR1 (Bacteriophage AR1)
Query: 1 WNWTGFRV 8
WN GFR+
Sbjct: 247 WNEMGFRI 254
>sp|YR831_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R831|Acanthamoeba
Query: 3 WTGFRVRL 10
WT F VRL
Sbjct: 567 WTDFGVRL 574
>sp|NS3D_BC133|NON-STRUCTURAL protein 3d|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 3 WTGFRVRL 10
WT RVRL
Sbjct: 111 WTADRVRL 118
>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)
Query: 2 NWTGFRVRL 10
NWT F V L
Sbjct: 88 NWTSFGVEL 96
>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus
Query: 2 NWTGFR 7
+WTGF+
Sbjct: 251 DWTGFK 256
>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)
Query: 2 NWTGFR 7
+WTGF+
Sbjct: 251 DWTGFK 256
>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus
Query: 2 NWTGFR 7
+WTGF+
Sbjct: 251 DWTGFK 256
>sp|NCAP_PIRYV|NUCLEOPROTEIN virus (PIRYV)
Query: 2 NWTGFRVRL 10
NW FRV +
Sbjct: 88 NWVSFRVTI 96
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 NWTGFR 7
+WTGF+
Sbjct: 257 DWTGFK 262
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 NWTGFR 7
+WTGF+
Sbjct: 257 DWTGFK 262
>sp|L_MOBVC|RNA-DIRECTED RNA polymerase L|Mobala mammarenavirus (isolate Rat/Central African
Query: 2 NWTGFR 7
+WTGF+
Sbjct: 2172 SWTGFK 2177
>sp|NS1A_MASV1|NON-STRUCTURAL polyprotein 1A|Mink astrovirus 1 (MAstV-1)
Query: 4 TGFRVR 9
TGFRVR
Sbjct: 464 TGFRVR 469
>sp|POL_SIVG1|GAG-POL polyprotein|Simian immunodeficiency virus agm.grivet (isolate
Query: 1 WNWTGFRV 8
W W G+++
Sbjct: 836 WEWMGYKL 843
>sp|NS1AB_MASV1|NON-STRUCTURAL polyprotein 1AB|Mink astrovirus 1 (MAstV-1)
Query: 4 TGFRVR 9
TGFRVR
Sbjct: 464 TGFRVR 469
7|SequenceR|40|31|CRRWIWNWTG
>sp|YR650_MIMIV|UNCHARACTERIZED protein R650|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 WIWNWT 9
WI+NWT
Sbjct: 185 WIYNWT 190
>sp|Y013_NPVAC|UNCHARACTERIZED 38.7 kDa protein in|Autographa californica nuclear polyhedrosis
Query: 4 WIWNW 8
W+WNW
Sbjct: 4 WLWNW 8
>sp|Y023_NPVOP|UNCHARACTERIZED 73.1 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 CRRWIWNWT 9
CR+W+++++
Sbjct: 427 CRKWVYSFS 435
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 RWIWNWTG 10
RW+WN+ G
Sbjct: 2901 RWMWNFVG 2908
>sp|YR069_MIMIV|UNCHARACTERIZED protein R69|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 CRRWIWNWT 9
CR WNW+
Sbjct: 155 CRNLQWNWS 163
>sp|VE8E2_HPV65|PROTEIN E8^E2C|Human papillomavirus 65
Query: 5 IWNWTG 10
+WNW G
Sbjct: 163 VWNWVG 168
>sp|TMP_BPPHC|PROBABLE tape measure protein|Streptomyces phage phiC31 (Bacteriophage
Query: 3 RWIWNW 8
+W+W+W
Sbjct: 516 QWLWDW 521
>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)
Query: 5 IWNWTG 10
+W+WTG
Sbjct: 667 VWSWTG 672
>sp|VE8E2_HPV04|PROTEIN E8^E2C|Human papillomavirus 4
Query: 5 IWNWTG 10
+WNW G
Sbjct: 163 VWNWVG 168
>sp|FIB12_BPB03|PRE-NECK appendage protein|Bacillus phage B103 (Bacteriophage B103)
Query: 6 WNWTG 10
WNW G
Sbjct: 750 WNWQG 754
>sp|MCE_RGDV|PUTATIVE mRNA-capping enzyme P5|Rice gall dwarf virus (RGDV)
Query: 4 WIWNWT 9
W+WN T
Sbjct: 607 WVWNQT 612
>sp|CAPSD_FBNY2|CAPSID protein|Faba bean necrotic yellows virus
Query: 6 WNWTG 10
WNW+G
Sbjct: 5 WNWSG 9
>sp|CAPSD_FBNY1|CAPSID protein|Faba bean necrotic yellows virus
Query: 6 WNWTG 10
WNW+G
Sbjct: 5 WNWSG 9
>sp|VF396_IIV3|UNCHARACTERIZED protein 091L|Invertebrate iridescent virus 3 (IIV-3)
Query: 4 WIWNWT 9
W+WN T
Sbjct: 917 WVWNGT 922
>sp|POL_FMVD|ENZYMATIC polyprotein|Figwort mosaic virus (strain DxS)
Query: 6 WNWT 9
WNWT
Sbjct: 507 WNWT 510
>sp|GB_EHV4|ENVELOPE glycoprotein B|Equine herpesvirus 4 (strain 1942)
Query: 6 WNWT 9
WNWT
Sbjct: 320 WNWT 323
>sp|GB_EHV1V|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain V592)
Query: 6 WNWT 9
WNWT
Sbjct: 379 WNWT 382
>sp|GB_EHV1D|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain Kentucky
Query: 6 WNWT 9
WNWT
Sbjct: 379 WNWT 382
>sp|GB_EHV1B|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain Ab4p)
Query: 6 WNWT 9
WNWT
Sbjct: 379 WNWT 382
>sp|GB_EHV1A|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain AB1)
Query: 6 WNWT 9
WNWT
Sbjct: 379 WNWT 382
>sp|GB_EHV1|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain HVS25A)
Query: 6 WNWT 9
WNWT
Sbjct: 379 WNWT 382
>sp|CAPSD_PVXHB|COAT protein|Potato virus X (strain HB)
Query: 1 CRRW---IWNW 8
CR++ +WNW
Sbjct: 126 CRKYAPVVWNW 136
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 5 IWNWTG 10
+WNW G
Sbjct: 355 VWNWVG 360
>sp|YL888_MIMIV|UNCHARACTERIZED protein L888|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 WIWNWT 9
WI+ WT
Sbjct: 69 WIYGWT 74
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 5 IWNWTG 10
+WNW G
Sbjct: 355 VWNWVG 360
>sp|YR329_MIMIV|UNCHARACTERIZED protein R329|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 WIWNWT 9
W W+W+
Sbjct: 73 WSWSWS 78
>sp|CAPSD_CAMVS|CAPSID protein|Cauliflower mosaic virus (strain Strasbourg)
Query: 1 CRRWIWNWTG 10
CR WI N G
Sbjct: 412 CRCWICNIEG 421
>sp|CAPSD_CAMVN|CAPSID protein|Cauliflower mosaic virus (strain NY8153)
Query: 1 CRRWIWNWTG 10
CR WI N G
Sbjct: 410 CRCWICNIEG 419
>sp|CAPSD_CAMVD|CAPSID protein|Cauliflower mosaic virus (strain D/H)
Query: 1 CRRWIWNWTG 10
CR WI N G
Sbjct: 411 CRCWICNIEG 420
>sp|CAPSD_CAMVC|CAPSID protein|Cauliflower mosaic virus (strain CM-1841)
Query: 1 CRRWIWNWTG 10
CR WI N G
Sbjct: 410 CRCWICNIEG 419
>sp|443R_IIV6|UNCHARACTERIZED protein 443R|Invertebrate iridescent virus 6 (IIV-6)
Query: 4 WIWN 7
WIWN
Sbjct: 2294 WIWN 2297
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRWIWNWTG 10
C RW+ N G
Sbjct: 1541 CVRWVMNALG 1550
>sp|CAPSD_CAMVE|CAPSID protein|Cauliflower mosaic virus (strain BBC)
Query: 1 CRRWIWNWTG 10
CR WI N G
Sbjct: 411 CRCWISNIEG 420
>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype
Query: 1 CRRWIWNWTG 10
C RW+ N G
Sbjct: 1545 CVRWVMNALG 1554
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRWIWNWTG 10
C RW+ N G
Sbjct: 1543 CVRWVMNALG 1552
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRWIWNWTG 10
C RW+ N G
Sbjct: 1543 CVRWVMNALG 1552
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRWIWNWTG 10
C RW+ N G
Sbjct: 1543 CVRWVMNALG 1552
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRWIWNWTG 10
C RW+ N G
Sbjct: 1543 CVRWVMNALG 1552
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRWIWNWTG 10
C RW+ N G
Sbjct: 1377 CVRWVMNALG 1386
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRWIWNWTG 10
C RW+ N G
Sbjct: 1543 CVRWVMNALG 1552
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 CRRWIWN 7
CRR WN
Sbjct: 2414 CRRHNWN 2420
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 CRRWIWN 7
CRR WN
Sbjct: 2414 CRRHNWN 2420
>sp|CAPSD_LOLV|CAPSID protein|Lolium latent virus (isolate Lolium/USA/US1/-)
Query: 4 WIWNW 8
++WNW
Sbjct: 195 FVWNW 199
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRWIWNWTG 10
C RW+ N G
Sbjct: 1543 CVRWVMNALG 1552
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRWIWNWTG 10
C RW+ N G
Sbjct: 1543 CVRWVMNALG 1552
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRWIWNWTG 10
C RW+ N G
Sbjct: 1543 CVRWVMNALG 1552
>sp|CAPSD_MDV1|CAPSID protein|Milk vetch dwarf virus (isolate
Query: 6 WNWTG 10
WNW G
Sbjct: 5 WNWNG 9
>sp|CAPSD_LVX|COAT protein|Lily virus X
Query: 1 CR---RWIWNW 8
CR +++WNW
Sbjct: 97 CRYYAKFVWNW 107
>sp|STRU2_BPPAJ|STRUCTURAL protein 2|Pseudomonas phage PAJU2
Query: 6 WNWT 9
WNWT
Sbjct: 184 WNWT 187
>sp|POL_CSVMV|PUTATIVE enzymatic polyprotein|Cassava vein mosaic virus (CsVMV)
Query: 5 IWNWT 9
IW WT
Sbjct: 476 IWTWT 480
>sp|CAPSD_CERV|PROBABLE capsid protein|Carnation etched ring virus (CERV)
Query: 1 CRRWIWNWTG 10
CR W+ N G
Sbjct: 418 CRCWVCNIEG 427
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 6 WNWTG 10
W+WTG
Sbjct: 319 WHWTG 323
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 CRRWIWNW 8
C R+++NW
Sbjct: 2963 CGRYLFNW 2970
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 CRRWIWNW 8
C R+++NW
Sbjct: 2963 CGRYLFNW 2970
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 CRRWIWNW 8
C R+++NW
Sbjct: 2940 CGRYLFNW 2947
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 CRRWIWNW 8
C R+++NW
Sbjct: 2967 CGRYLFNW 2974
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 CRRWIWNW 8
C R+++NW
Sbjct: 2963 CGRYLFNW 2970
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 CRRWIWNW 8
C R+++NW
Sbjct: 2963 CGRYLFNW 2970
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 CRRWIWNW 8
C R+++NW
Sbjct: 2940 CGRYLFNW 2947
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 6 WNWTG 10
W+WTG
Sbjct: 126 WHWTG 130
>sp|MREP_SCSVF|MASTER replication protein|Subterranean clover stunt virus (strain
Query: 1 CRRWIW 6
CRR IW
Sbjct: 172 CRRIIW 177
>sp|CAPSD_PVXXC|COAT protein|Potato virus X (strain Xc)
Query: 1 CRRW---IWNW 8
C+++ +WNW
Sbjct: 126 CKKYAPVVWNW 136
>sp|CAPSD_PVXCP|COAT protein|Potato virus X (strain CP)
Query: 1 CRRW---IWNW 8
C+++ +WNW
Sbjct: 126 CKKYAPVVWNW 136
>sp|YR061_MIMIV|PUTATIVE BTB/POZ domain and WD-repeat|Acanthamoeba polyphaga mimivirus
Query: 5 IWNW 8
IWNW
Sbjct: 453 IWNW 456
>sp|CAPSD_TASV2|CAPSID polyprotein VP90|Turkey astrovirus 2 (TAstV-2)
Query: 4 WIWNWT 9
+ WNW+
Sbjct: 608 YFWNWS 613
>sp|ENV_BLVAU|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Australian)
Query: 3 RWIWNW 8
+W WNW
Sbjct: 419 QWPWNW 424
>sp|ENV_BLVAF|ENVELOPE glycoprotein|Bovine leukemia virus (isolate American
Query: 3 RWIWNW 8
+W WNW
Sbjct: 419 QWPWNW 424
>sp|ENV_BLVB5|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Belgium
Query: 3 RWIWNW 8
+W WNW
Sbjct: 419 QWPWNW 424
>sp|ENV_BLV|ENVELOPE glycoprotein|Bovine leukemia virus (BLV)
Query: 3 RWIWNW 8
+W WNW
Sbjct: 419 QWPWNW 424
>sp|ENV_BLVJ|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Japanese
Query: 3 RWIWNW 8
+W WNW
Sbjct: 419 QWPWNW 424
>sp|ENV_BLVAV|ENVELOPE glycoprotein|Bovine leukemia virus (isolate American
Query: 3 RWIWNW 8
+W WNW
Sbjct: 419 QWPWNW 424
8|SequenceR|45|36|SAARCCRRWI
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 2 AARCCRRWI 10
A RCC WI
Sbjct: 382 AQRCCYDWI 390
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 1 SAARCCRRWI 10
S+ CCR W+
Sbjct: 191 SSKTCCRDWV 200
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 1 SAARCCRRWI 10
S+ CCR W+
Sbjct: 184 SSKTCCRDWV 193
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 SAARCCRRWI 10
S CCR W+
Sbjct: 191 SCKTCCRDWV 200
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 1 SAARCCRRWI 10
S CCR W+
Sbjct: 187 SNKTCCRDWV 196
>sp|VE1_BPV4|REPLICATION protein E1|Bos taurus papillomavirus 4 (Bovine
Query: 5 CCRRWI 10
CCR W+
Sbjct: 191 CCRNWV 196
>sp|MTRX_AMPV1|MATRIX protein|Avian metapneumovirus (isolate Canada
Query: 1 SAARCCRRW 9
S +R CR W
Sbjct: 234 SISRICRNW 242
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 1 SAARCCRRWI 10
S CC+ W+
Sbjct: 189 SNKTCCKHWV 198
>sp|VL2_OVPVD|MINOR capsid protein L2|Odocoileus virginianus papillomavirus 1 (DPV)
Query: 4 RCCRRW 9
R C+RW
Sbjct: 17 RTCKRW 22
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 1 SAARCCRRWI 10
S + CC WI
Sbjct: 210 SDSTCCHDWI 219
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 1 SAARCCRRWI 10
S CC+ W+
Sbjct: 190 SNKTCCKHWV 199
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 1 SAARCCRRWI 10
S + CC WI
Sbjct: 209 SDSTCCNDWI 218
>sp|ICP4_GAHVM|MAJOR viral transcription factor ICP4|Gallid herpesvirus 2 (strain
Query: 3 ARCCRRW 9
++CC RW
Sbjct: 2101 SQCCVRW 2107
>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)
Query: 1 SAARCCRRWI 10
+ +CCRR +
Sbjct: 2239 ACVKCCRRCV 2248
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 SAARCCRRWI 10
S CC+ W+
Sbjct: 188 SHKTCCKDWV 197
>sp|YL127_MIMIV|PUTATIVE F-box protein L127|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 ARCCRRW 9
+R CR+W
Sbjct: 26 SRVCRKW 32
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 SAARCCRRWI 10
S CC+ W+
Sbjct: 188 SHKTCCKDWV 197
>sp|ICP4_GAHVG|MAJOR viral transcription factor ICP4|Gallid herpesvirus 2 (strain GA)
Query: 3 ARCCRRW 9
++CC RW
Sbjct: 1195 SQCCVRW 1201
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 SAARCCRRWI 10
S CC+ W+
Sbjct: 190 SDKTCCKDWV 199
>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)
Query: 4 RCCRRW 9
RC RRW
Sbjct: 563 RCRRRW 568
>sp|POL_VILV1|GAG-POL polyprotein|Maedi visna virus (strain 1514
Query: 2 AARCCRRWI 10
A + CR+W+
Sbjct: 258 ARQICRQWV 266
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 1 SAARCCRRWI 10
S CC W+
Sbjct: 186 SNKTCCHHWV 195
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 SAARCCRRWI 10
S CC W+
Sbjct: 187 SYKTCCNHWV 196
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 SAARCCRRWI 10
S CC W+
Sbjct: 187 SYKTCCNHWV 196
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 SAARCCRRWI 10
S CC W+
Sbjct: 186 SHKTCCNHWV 195
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 6 CRRWI 10
CRRW+
Sbjct: 434 CRRWL 438
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 6 CRRWI 10
CRRW+
Sbjct: 434 CRRWL 438
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 CRRWI 10
CRRW+
Sbjct: 434 CRRWL 438
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 6 CRRWI 10
CRRW+
Sbjct: 434 CRRWL 438
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 6 CRRWI 10
CRRW+
Sbjct: 434 CRRWL 438
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 SAARCCRRWI 10
S CC W+
Sbjct: 186 SYKTCCNAWV 195
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 SAARCCRRWI 10
S CC W+
Sbjct: 185 SYKTCCNAWV 194
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 5 CCRRWI 10
CC W+
Sbjct: 194 CCENWV 199
>sp|GAG_VILV1|GAG polyprotein|Maedi visna virus (strain 1514
Query: 2 AARCCRRWI 10
A + CR+W+
Sbjct: 258 ARQICRQWV 266
>sp|VE1_BPV6|REPLICATION protein E1|Bos taurus papillomavirus 6 (Bovine
Query: 5 CCRRWI 10
CC W+
Sbjct: 192 CCNNWV 197
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 SAARCCRRWI 10
S CC W+
Sbjct: 186 SYKTCCNAWV 195
9|SequenceR|50|41|ALVAASAARC
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 ALVAASAARC 10
ALV A A+RC
Sbjct: 274 ALVPAYASRC 283
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 ALVAASAARC 10
ALV A A+RC
Sbjct: 274 ALVPAYASRC 283
>sp|DPOL_WHV5|PROTEIN P|Woodchuck hepatitis B virus (isolate
Query: 2 LVAASAARC 10
L+AA ARC
Sbjct: 769 LIAACLARC 777
>sp|DPOL_WHV4|PROTEIN P|Woodchuck hepatitis B virus (isolate
Query: 2 LVAASAARC 10
L+AA ARC
Sbjct: 769 LIAACLARC 777
>sp|DPOL_WHV1|PROTEIN P|Woodchuck hepatitis B virus (isolate
Query: 2 LVAASAARC 10
L+AA ARC
Sbjct: 764 LIAACLARC 772
>sp|DPOL_GSHV|PROTEIN P|Ground squirrel hepatitis virus (strain
Query: 2 LVAASAARC 10
L+AA ARC
Sbjct: 766 LIAACLARC 774
>sp|DPOL_WHV3|PROTEIN P|Woodchuck hepatitis B virus (isolate
Query: 2 LVAASAARC 10
L+AA ARC
Sbjct: 769 LIAACLARC 777
>sp|DPOL_WHV2|PROTEIN P|Woodchuck hepatitis B virus (isolate
Query: 2 LVAASAARC 10
L+AA ARC
Sbjct: 768 LIAACLARC 776
10|SequenceR|55|46|TFGLPALVAA
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 FGLPALVA 9
FGLP LVA
Sbjct: 1196 FGLPKLVA 1203
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 FGLPALVA 9
FGLP LVA
Sbjct: 1196 FGLPKLVA 1203
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 FGLPALVA 9
FGLP LVA
Sbjct: 1196 FGLPQLVA 1203
>sp|POL_SIVSP|GAG-POL polyprotein|Simian immunodeficiency virus (isolate PBj14/BCL-3)
Query: 2 FGLPALVA 9
FGLP LVA
Sbjct: 1182 FGLPRLVA 1189
>sp|POL_SIVS4|GAG-POL polyprotein|Simian immunodeficiency virus (isolate F236/smH4)
Query: 2 FGLPALVA 9
FGLP LVA
Sbjct: 1182 FGLPRLVA 1189
>sp|POL_SIVM1|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm142-83)
Query: 2 FGLPALVA 9
FGLP LVA
Sbjct: 1181 FGLPRLVA 1188
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 FGLPALVA 9
FGLP LVA
Sbjct: 1195 FGLPNLVA 1202
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 FGLPALVA 9
FG+P LVA
Sbjct: 1194 FGIPKLVA 1201
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 FGLPALVA 9
FG+P LVA
Sbjct: 1197 FGIPQLVA 1204
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 FGLPALVA 9
FG+P LVA
Sbjct: 1194 FGIPQLVA 1201
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 FGLPALVA 9
FG+P LVA
Sbjct: 1195 FGIPQLVA 1202
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 FGLPALVA 9
FG+P LVA
Sbjct: 1195 FGIPQLVA 1202
>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)
Query: 2 FGLPALVA 9
F LPALVA
Sbjct: 1182 FHLPALVA 1189
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 FGLPALVA 9
FG+P LVA
Sbjct: 1196 FGIPLLVA 1203
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 FGLPALVA 9
FG+P LVA
Sbjct: 1197 FGIPNLVA 1204
>sp|POLG_MRFVC|GENOME polyprotein|Maize rayado fino virus (isolate
Query: 1 TFGLPALVAA 10
F LPALV A
Sbjct: 813 NFSLPALVGA 822
11|SequenceR|60|51|PPKRLTFGLP
>sp|POL2_CNSV|RNA2 polyprotein|Cycas necrotic stunt virus (CNSV)
Query: 1 PPKRLTFG 8
PPKRLT G
Sbjct: 873 PPKRLTLG 880
>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 1 PPKRLTFG 8
P K++TFG
Sbjct: 849 PSKKVTFG 856
>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 1 PPKRLTFG 8
P K++TFG
Sbjct: 849 PSKKVTFG 856
>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 1 PPKRLTFG 8
P K++TFG
Sbjct: 849 PSKKVTFG 856
>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 1 PPKRLTFG 8
P K++TFG
Sbjct: 849 PSKKVTFG 856
>sp|Z_TAMVU|RING finger protein Z|Tamiami mammarenavirus (isolate Rat/United
Query: 2 PKRLTF 7
PKRLTF
Sbjct: 79 PKRLTF 84
>sp|GC_EHV1D|ENVELOPE glycoprotein C|Equine herpesvirus 1 (strain Kentucky
Query: 2 PKRLTFGLP 10
PKR F LP
Sbjct: 163 PKRQLFNLP 171
>sp|GC_EHV1B|ENVELOPE glycoprotein C|Equine herpesvirus 1 (strain Ab4p)
Query: 2 PKRLTFGLP 10
PKR F LP
Sbjct: 163 PKRQLFNLP 171
>sp|DNBI_SUHV|MAJOR DNA-binding protein|Suid herpesvirus 1 (SuHV-1) (Pseudorabies
Query: 1 PPKRLTFGL 9
P KRLTF +
Sbjct: 1166 PEKRLTFDM 1174
12|SequenceR|65|56|NRGVAPPKRL
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 NRGVAPPKRL 10
++ ++PPKRL
Sbjct: 474 DKAISPPKRL 483
>sp|VP2_POVLY|MINOR capsid protein VP2|B-lymphotropic polyomavirus (LPV)
Query: 1 NRGVAPPKR 9
NRG PP R
Sbjct: 235 NRGEPPPSR 243
>sp|DNLI_ASFP4|DNA ligase|African swine fever virus (isolate
Query: 1 NRGVAPP 7
NRG+ PP
Sbjct: 120 NRGMIPP 126
>sp|DNLI_ASFK5|DNA ligase|African swine fever virus (isolate
Query: 1 NRGVAPP 7
NRG+ PP
Sbjct: 120 NRGMIPP 126
>sp|DNLI_ASFB7|DNA ligase|African swine fever virus (strain
Query: 1 NRGVAPP 7
NRG+ PP
Sbjct: 120 NRGMIPP 126
>sp|VG41_ICHVA|UNCHARACTERIZED protein ORF41|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 NRGVAPPKRL 10
NRGV P+R+
Sbjct: 257 NRGVEVPERV 266
>sp|DNLI_ASFM2|DNA ligase|African swine fever virus (isolate
Query: 1 NRGVAPP 7
NRG+ PP
Sbjct: 120 NRGMIPP 126
>sp|POL2_BRAV|RNA2 polyprotein|Blackcurrant reversion association virus (BRAV)
Query: 4 VAPPKR 9
VAPPKR
Sbjct: 1023 VAPPKR 1028
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 NRGVAP 6
NRGVAP
Sbjct: 1360 NRGVAP 1365
>sp|MP_RCNMV|MOVEMENT protein|Red clover necrotic mosaic virus
Query: 2 RGVAPP 7
RG+APP
Sbjct: 228 RGIAPP 233
13|SequenceR|70|61|RHHRRNRGVA
>sp|VP2_SV40|MINOR capsid protein VP2|Simian virus 40 (SV40)
Query: 1 RHHRRNR 7
RH RRNR
Sbjct: 342 RHKRRNR 348
>sp|VF224_IIV6|PROBABLE cysteine proteinase 224L|Invertebrate iridescent virus 6 (IIV-6)
Query: 2 HHRRNRGV 9
H RRN GV
Sbjct: 359 HTRRNSGV 366
>sp|E1A_ADE05|EARLY E1A protein|Human adenovirus C serotype 5
Query: 2 HHRRNRG 8
+HRRN G
Sbjct: 159 YHRRNTG 165
>sp|E1A_ADE02|EARLY E1A protein|Human adenovirus C serotype 2
Query: 2 HHRRNRG 8
+HRRN G
Sbjct: 159 YHRRNTG 165
>sp|MMP_TNAVC|PUTATIVE matrix metalloproteinase|Trichoplusia ni ascovirus 2c (TnAV-2c)
Query: 3 HRRNRGVA 10
HR NRG+A
Sbjct: 137 HRINRGLA 144
14|SequenceR|75|66|GGRPHRHHRR
>sp|DPO12_BPK64|DEPOLYMERASE, capsule KN4-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)
Query: 1 GGRPHRHHRR 10
GG+ HR +RR
Sbjct: 554 GGQIHRQYRR 563
>sp|CAPSD_GOCV|PROBABLE capsid protein|Goose circovirus (GoCV)
Query: 4 PHRHHRR 10
PHR+H+R
Sbjct: 167 PHRYHKR 173
>sp|VG64_ICHVA|UNCHARACTERIZED protein ORF64|Ictalurid herpesvirus 1 (strain Auburn)
Query: 5 HRHHRR 10
H HHRR
Sbjct: 307 HAHHRR 312
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 GGRPHR 6
GRPHR
Sbjct: 1737 AGRPHR 1742
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 GGRPHR 6
GRPHR
Sbjct: 1757 AGRPHR 1762
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 GGRPHR 6
GRPHR
Sbjct: 1787 AGRPHR 1792
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 GGRPHR 6
GRPHR
Sbjct: 1737 AGRPHR 1742
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 GGRPHR 6
GRPHR
Sbjct: 1757 AGRPHR 1762
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 GGRPHR 6
GRPHR
Sbjct: 1787 AGRPHR 1792
>sp|VF335_IIV6|UNCHARACTERIZED protein 335L|Invertebrate iridescent virus 6 (IIV-6)
Query: 2 GRPHRHHRR 10
GRP +H+ R
Sbjct: 26 GRPRKHNVR 34
>sp|ORFA_ELHVK|PROTEIN ORF A|Elephantid herpesvirus 1 (isolate Asian
Query: 3 RPHRHH 8
RPH HH
Sbjct: 470 RPHIHH 475
>sp|MCP_POV01|MAJOR capsid protein|Pyramimonas orientalis virus (PoV01)
Query: 3 RPHRHHRR 10
+P++HH R
Sbjct: 298 QPYQHHER 305
>sp|CAPSD_CPVBM|INNER capsid protein VP1|Bombyx mori cytoplasmic polyhedrosis virus
Query: 2 GRPHRH 7
GRPH H
Sbjct: 1133 GRPHVH 1138
>sp|CAPSD_LDCPR|INNER capsid protein VP1|Lymantria dispar cypovirus 1 (isolate
Query: 2 GRPHRH 7
GRPH H
Sbjct: 1133 GRPHVH 1138
>sp|CAPSD_CAMVD|CAPSID protein|Cauliflower mosaic virus (strain D/H)
Query: 1 GGRPHRHHRR 10
GG P R++ R
Sbjct: 113 GGEPSRYNER 122
>sp|MCP_PPV01|MAJOR capsid protein|Phaeocystis pouchetii virus (PpV01)
Query: 3 RPHRHHRR 10
+P++HH R
Sbjct: 439 QPYQHHTR 446
>sp|MCP_CEV01|MAJOR capsid protein|Chrysochromulina ericina virus (CeV01)
Query: 3 RPHRHHRR 10
+P++HH R
Sbjct: 503 QPYQHHTR 510
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GGRPHRH 7
GGR +RH
Sbjct: 2129 GGRAYRH 2135
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GGRPHRH 7
GGR +RH
Sbjct: 2129 GGRAYRH 2135
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GGRPHRH 7
GGR +RH
Sbjct: 2129 GGRAYRH 2135
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GGRPHRH 7
GGR +RH
Sbjct: 2129 GGRAYRH 2135
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GGRPHRH 7
GGR +RH
Sbjct: 2129 GGRAYRH 2135
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GGRPHRH 7
GGR +RH
Sbjct: 2130 GGRAYRH 2136
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 GGRPHR 6
G RPHR
Sbjct: 2158 GSRPHR 2163
>sp|POL_BIV29|GAG-POL polyprotein|Bovine immunodeficiency virus (strain R29)
Query: 4 PHRHHR 9
PHRH R
Sbjct: 1456 PHRHMR 1461
>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)
Query: 4 PHRHH 8
PH HH
Sbjct: 2212 PHHHH 2216
>sp|GLYCO_KHUV|GLYCOPROTEIN virus (KHUV)
Query: 1 GGRPHRHH 8
GGR + HH
Sbjct: 367 GGRCYHHH 374
>sp|POL_JEMBR|GAG-POL polyprotein|Jembrana disease virus (JDV)
Query: 4 PHRHHR 9
PHRH R
Sbjct: 1413 PHRHMR 1418
>sp|TGB1_PMTVS|MOVEMENT protein TGB1|Potato mop-top virus (isolate Potato/Sweden/Sw)
Query: 1 GGRPHR 6
G RPHR
Sbjct: 7 GSRPHR 12
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 GGRPHRHHR 9
GGR HR R
Sbjct: 738 GGRNHRQRR 746
15|SequenceR|80|71|AALCSGGRPH
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 CSGGRPH 10
CSGGR H
Sbjct: 506 CSGGRQH 512
Query: 2 ALCSGGRPH 10
A+C+G PH
Sbjct: 1021 AVCTGDCPH 1029
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 2 ALCSGGRP 9
ALC+GG P
Sbjct: 382 ALCTGGVP 389
>sp|POLG_CILVC|RNA replication protein|Citrus leprosis virus C (isolate
Query: 3 LCSGGRPH 10
LCSG R H
Sbjct: 1044 LCSGKRSH 1051
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 2 ALCSGGRP 9
A+C+GG P
Sbjct: 381 AICTGGLP 388
>sp|E42_ADES1|PROTEIN E4.2|Snake adenovirus serotype 1 (SnAdV-1)
Query: 3 LCSGGRPH 10
+CS GRP+
Sbjct: 11 VCSSGRPY 18
16|SequenceR|85|76|MRHHAAALCS
>sp|TERL_BPT3|TERMINASE, large subunit|Enterobacteria phage T3 (Bacteriophage T3)
Query: 1 MRHHAAAL 8
++HHAAAL
Sbjct: 437 LKHHAAAL 444
>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)
Query: 2 RHHAAALCS 10
RH AA++C+
Sbjct: 1232 RHTAASVCN 1240
>sp|RPB3_ASFWA|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (isolate
Query: 2 RHHAAALC 9
RHH LC
Sbjct: 215 RHHRLGLC 222
>sp|RPB3_ASFP4|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (isolate
Query: 2 RHHAAALC 9
RHH LC
Sbjct: 215 RHHRLGLC 222
>sp|RPB3_ASFM2|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (isolate
Query: 2 RHHAAALC 9
RHH LC
Sbjct: 215 RHHRLGLC 222
>sp|RPB3_ASFK5|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (isolate
Query: 2 RHHAAALC 9
RHH LC
Sbjct: 215 RHHRLGLC 222
>sp|RPB3_ASFB7|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (strain
Query: 2 RHHAAALC 9
RHH LC
Sbjct: 215 RHHRLGLC 222
>sp|NCAP_SENDZ|NUCLEOPROTEIN virus (strain Z) (SeV)
Query: 1 MRHHAAAL 8
+RHH A+L
Sbjct: 394 LRHHLASL 401
17|SequenceR|90|81|DARWRMRHHA
>sp|YB1_MDBVW|PUTATIVE BEN domain-containing protein B1|Microplitis demolitor bracovirus
Query: 1 DARWRMRH 8
D+RW ++H
Sbjct: 122 DSRWTLKH 129
>sp|POL_SFVCP|PRO-POL polyprotein|Simian foamy virus (isolate chimpanzee)
Query: 1 DARWRM 6
D RWRM
Sbjct: 209 DGRWRM 214
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 DARWRM 6
D RWRM
Sbjct: 209 DGRWRM 214
>sp|NCAP_CVHNL|NUCLEOPROTEIN coronavirus NL63 (HCoV-NL63)
Query: 3 RWRMR 7
RWRMR
Sbjct: 61 RWRMR 65
>sp|NCAP_SENDZ|NUCLEOPROTEIN virus (strain Z) (SeV)
Query: 2 ARWRMRHH 9
A+ R+RHH
Sbjct: 390 AKGRLRHH 397
>sp|NCAP_SENDF|NUCLEOPROTEIN virus (strain Fushimi) (SeV)
Query: 2 ARWRMRHH 9
A+ R+RHH
Sbjct: 390 AKERLRHH 397
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 ARWRMRHH 9
A+ R+RHH
Sbjct: 390 AKERLRHH 397
>sp|NCAP_BC512|NUCLEOPROTEIN coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
Query: 3 RWRMR 7
RWRMR
Sbjct: 60 RWRMR 64
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 RWRMRHH 9
RWR RHH
Sbjct: 37 RWRYRHH 43
>sp|NCAP_SENDE|NUCLEOPROTEIN virus (strain Enders) (SeV)
Query: 2 ARWRMRHH 9
A+ R+RHH
Sbjct: 390 AKERLRHH 397
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 ARWRMRHH 9
A+ R+RHH
Sbjct: 390 AKERLRHH 397
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 2 ARWRMRHH 9
A+ R+RHH
Sbjct: 390 AKERLRHH 397
>sp|NCAP_PEDV7|NUCLEOPROTEIN epidemic diarrhea virus (strain
Query: 3 RWRMR 7
RWRMR
Sbjct: 58 RWRMR 62
>sp|NCAP_SENDA|NUCLEOPROTEIN virus (strain Hamamatsu) (SeV)
Query: 2 ARWRMRHH 9
A+ R+RHH
Sbjct: 390 AKERLRHH 397
>sp|NCAP_SENDO|NUCLEOPROTEIN virus (strain Ohita) (SeV)
Query: 2 ARWRMRHH 9
A+ R+RHH
Sbjct: 390 AKERLRHH 397
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 ARWRMRHHA 10
RW M H+A
Sbjct: 227 GRWLMLHYA 235
>sp|LTP_MUHVK|LARGE tegument protein deneddylase|Murid herpesvirus 1 (strain K181)
Query: 1 DARWR 5
DARWR
Sbjct: 1223 DARWR 1227
>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus
Query: 2 ARWRMRHH 9
A W+M HH
Sbjct: 898 AFWKMIHH 905
>sp|POL1_BAYMY|GENOME polyprotein 1|Barley yellow mosaic virus (isolate
Query: 2 ARWRMRHHA 10
A W M+H A
Sbjct: 2335 AHWSMKHGA 2343
>sp|POL1_BAYMG|GENOME polyprotein 1|Barley yellow mosaic virus (isolate
Query: 2 ARWRMRHHA 10
A W M+H A
Sbjct: 2337 AHWSMKHGA 2345
>sp|VIF_HV1MV|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 ARWRMRHH 9
A WR RHH
Sbjct: 36 ANWRYRHH 43
>sp|POL1_BAYMJ|GENOME polyprotein 1|Barley yellow mosaic virus (strain
Query: 2 ARWRMRHHA 10
A W M+H A
Sbjct: 2335 AHWSMKHGA 2343
>sp|POLG_PVCV2|GENOME polyprotein|Petunia vein clearing virus (isolate
Query: 4 WRMRHHA 10
WR+++HA
Sbjct: 223 WRVQNHA 229
>sp|POLG_PVCV1|GENOME polyprotein|Petunia vein clearing virus (isolate
Query: 4 WRMRHHA 10
WR+++HA
Sbjct: 222 WRVQNHA 228
>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 WRMRHH 9
WR+R+H
Sbjct: 193 WRLRNH 198
18|SequenceR|95|86|ELSRGDARWR
>sp|RIR1_ASFWA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (isolate
Query: 3 SRGDARW 9
+RGD RW
Sbjct: 324 NRGDGRW 330
>sp|RIR1_ASFP4|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (isolate
Query: 3 SRGDARW 9
+RGD RW
Sbjct: 324 NRGDGRW 330
>sp|VFUS_VACC6|14 kDa fusion protein|Vaccinia virus (strain WR 65-16)
Query: 1 ELSRGDARW 9
EL G+ARW
Sbjct: 52 ELQSGEARW 60
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 2 LSRGDARWR 10
L GD RW+
Sbjct: 156 LDTGDNRWK 164
>sp|POL2_CPMVS|RNA2 polyprotein|Cowpea mosaic virus (strain SB)
Query: 1 ELSRGDARWR 10
E SRG WR
Sbjct: 95 EFSRGFRTWR 104
>sp|DPOL_SFAVA|DNA polymerase|Spodoptera frugiperda ascovirus 1a (SfAV-1a)
Query: 2 LSRGDARWR 10
L RG A WR
Sbjct: 82 LERGGAVWR 90
>sp|019R_FRG3G|PUTATIVE serine/threonine-protein kinase 019R|Frog virus 3 (isolate Goorha)
Query: 2 LSRGDARW 9
+SRG+ RW
Sbjct: 394 VSRGEPRW 401
>sp|VP2_AHSV3|OUTER capsid protein VP2|African horse sickness virus 3
Query: 5 GDARW 9
GDARW
Sbjct: 982 GDARW 986
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 RGDARW 9
RGD RW
Sbjct: 728 RGDGRW 733
>sp|RIR1_EHV2|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Equine herpesvirus 2 (strain 86/87)
Query: 1 ELSRGDARW 9
+LSRG+ W
Sbjct: 565 KLSRGEFHW 573
19|SequenceR|100|91|HVPLKELSRG
>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)
Query: 1 HVPLKELS 8
+VPLKEL+
Sbjct: 38 YVPLKELT 45
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 1 HVPLKELS 8
+VPLKEL+
Sbjct: 38 YVPLKELT 45
>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 HVPLKELS 8
+VPLKEL+
Sbjct: 38 YVPLKELT 45
>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)
Query: 1 HVPLKELS 8
+VPLKEL+
Sbjct: 38 YVPLKELT 45
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 HVPLKELS 8
+VPLKEL+
Sbjct: 38 YVPLKELT 45
>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 HVPLKELS 8
+VPLKEL+
Sbjct: 38 YVPLKELT 45
>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins
Query: 1 HVPLKELS 8
+VPLKEL+
Sbjct: 38 YVPLKELT 45
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 1 HVPLKELS 8
+VPLKEL+
Sbjct: 38 YVPLKELT 45
20|SequenceR|105|96|IVLGMHVPLK
>sp|YL520_MIMIV|PUTATIVE BTB/POZ domain-containing protein L520|Acanthamoeba polyphaga
Query: 1 IVLGMHVPLK 10
I+LG+++PLK
Sbjct: 757 IMLGLYIPLK 766
>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus
Query: 3 LGMHVPLK 10
LG+H+P+K
Sbjct: 1215 LGLHLPIK 1222
>sp|DEPOL_BPK51|DEPOLYMERASE, capsule KL64-specific|Klebsiella phage P510 (Bacteriophage P510)
Query: 1 IVLGMHVPLK 10
IV G+H P K
Sbjct: 691 IVEGLHCPFK 700
>sp|RDRP_IBDVU|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 2 VLGMHVPLK 10
V+G+H+P K
Sbjct: 827 VVGLHLPAK 835
>sp|RDRP_IBDVB|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 2 VLGMHVPLK 10
V+G+H+P K
Sbjct: 827 VVGLHLPAK 835
>sp|RDRP_IBDVA|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 2 VLGMHVPLK 10
V+G+H+P K
Sbjct: 826 VVGLHLPAK 834
>sp|RDRP_IBDV5|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 2 VLGMHVPLK 10
V+G+H+P K
Sbjct: 501 VVGLHLPAK 509
>sp|RDRP_IBDV|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 2 VLGMHVPLK 10
V+G+H+P K
Sbjct: 827 VVGLHLPAK 835
>sp|POLN_CRPVC|REPLICASE polyprotein|Cricket paralysis virus (isolate
Query: 2 VLGMHVP 8
++GMH+P
Sbjct: 1177 LIGMHIP 1183
>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)
Query: 2 VLGMHVP 8
++GMH+P
Sbjct: 81 IVGMHLP 87
>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)
Query: 4 GMHVPLK 10
G+H+P+K
Sbjct: 2036 GVHIPIK 2042
>sp|R1A_GLRV3|REPLICASE protein 1a|Grapevine leafroll-associated virus 3 (isolate
Query: 3 LGMHVPL 9
+G+HVPL
Sbjct: 171 VGVHVPL 177
>sp|R1AB_GLRV3|REPLICASE polyprotein 1ab|Grapevine leafroll-associated virus 3 (isolate
Query: 3 LGMHVPL 9
+G+HVPL
Sbjct: 171 VGVHVPL 177
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 VLGMHVPLK 10
+ G H+P+K
Sbjct: 1991 LFGFHIPVK 1999
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 VLGMHVPLK 10
+ G H+P+K
Sbjct: 1991 LFGFHIPVK 1999
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 VLGMHVPLK 10
+ G H+P+K
Sbjct: 1991 LFGFHIPVK 1999
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 VLGMHVPLK 10
+ G H+P+K
Sbjct: 1991 LFGFHIPVK 1999
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 VLGMHVPLK 10
+ G H+P+K
Sbjct: 1991 LFGFHIPVK 1999
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 VLGMHVPLK 10
+ G H+P+K
Sbjct: 1991 LFGFHIPVK 1999
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 VLGMHVPLK 10
+ G H+P+K
Sbjct: 1991 LFGFHIPVK 1999
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 VLGMHVPLK 10
+ G H+P+K
Sbjct: 1991 LFGFHIPVK 1999
>sp|GLYCO_DMSVA|GLYCOPROTEIN melanogaster sigma virus (isolate
Query: 3 LGMHVPL 9
LG HVPL
Sbjct: 137 LGTHVPL 143
>sp|POL1_BRAV|RNA1 polyprotein|Blackcurrant reversion association virus (BRAV)
Query: 1 IVLGMHV 7
+V+GMHV
Sbjct: 1336 VVVGMHV 1342
>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate
Query: 1 IVLGMHV 7
I+LG+HV
Sbjct: 1508 IILGLHV 1514
21|SequenceR|110|101|QEVETIVLGM
***** No hits found ******
22|SequenceR|115|106|SFSPEQEVET
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 1 SFSPEQEVE 9
SFSP E+E
Sbjct: 6737 SFSPRSEME 6745
>sp|UBC_ASFK5|UBIQUITIN-CONJUGATING enzyme E2|African swine fever virus (isolate
Query: 1 SFSPEQEVET 10
++SP Q++ET
Sbjct: 100 TWSPAQKIET 109
23|SequenceR|120|111|LSAIDSFSPE
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 2 SAIDSFSPE 10
SA+DS+ P+
Sbjct: 306 SAVDSYDPD 314
>sp|1A_BBMV|REPLICATION protein 1a|Broad bean mottle virus
Query: 4 IDSFSPE 10
IDSF PE
Sbjct: 95 IDSFPPE 101
>sp|289L_IIV6|PUTATIVE Bro-N domain-containing protein 289L|Invertebrate iridescent virus
Query: 3 AIDSFSP 9
AIDSF P
Sbjct: 362 AIDSFEP 368
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 2 SAIDSFSPE 10
SA+DS+ P+
Sbjct: 261 SAVDSYDPD 269
>sp|CFXQ_MIMIV|PUTATIVE cfxQ-like protein R730|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 AIDSFSPE 10
+IDS++PE
Sbjct: 300 SIDSYTPE 307
>sp|VG78_ICHVA|PUTATIVE zinc-binding protein ORF78|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 LSAIDSFSPE 10
+SAID+F+ E
Sbjct: 335 ISAIDTFAVE 344
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 2 SAIDSFSPE 10
SA+DS+ P+
Sbjct: 357 SAVDSYDPD 365
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 2 SAIDSFSPE 10
SA+DS+ P+
Sbjct: 377 SAVDSYDPD 385
>sp|GFAT_MIMIV|PROBABLE glutamine--fructose-6-phosphate aminotransferase
Query: 3 AIDSFSPE 10
A+D F+PE
Sbjct: 165 ALDKFNPE 172
24|SequenceR|125|116|MCWVVLSAID
>sp|FUS_MPV15|FUSION glycoprotein F0|Murine pneumonia virus (strain 15)
Query: 2 CWVVLSAID 10
CWV+ S+ID
Sbjct: 278 CWVIRSSID 286
25|SequenceR|130|121|SIGVAMCWVV
>sp|CAPSD_PASVK|CAPSID protein|Panicum streak virus (isolate Kenya)
Query: 1 SIGVAMCWVV 10
SIG+ +CW+V
Sbjct: 107 SIGIGVCWLV 116
>sp|P0_PEMVW|SUPPRESSOR of silencing P0|Pea enation mosaic virus-1 (strain
Query: 2 IGVAMCWVV 10
+ +A+CW +
Sbjct: 52 VSIALCWAI 60
>sp|L_BEFVB|RNA-DIRECTED RNA polymerase L|Bovine ephemeral fever virus (strain
Query: 2 IGVAMCW 8
+GV +CW
Sbjct: 693 LGVKVCW 699
>sp|POL2_ARMVS|RNA2 polyprotein|Arabis mosaic virus (isolate Syrah)
Query: 1 SIGVAMCWV 9
S+G+ M WV
Sbjct: 260 SLGLNMAWV 268
>sp|US9_CHV1|ENVELOPE protein US9 homolog|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 2 IGVAMCWV 9
+G MCW+
Sbjct: 80 LGALMCWL 87
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 IGVAMCWV 9
+GVAM W+
Sbjct: 740 LGVAMAWL 747
26|SequenceR|135|126|YVSIYSIGVA
>sp|GP168_BPPZA|GENE product 16.8|Bacillus phage PZA (Bacteriophage PZA)
Query: 3 SIYSIGVA 10
+IY+IGVA
Sbjct: 46 NIYAIGVA 53
>sp|GP168_BPPH5|GENE product 16.8|Bacillus phage phi15 (Bacteriophage phi-15)
Query: 3 SIYSIGVA 10
+IY+IGVA
Sbjct: 46 NIYAIGVA 53
>sp|RP147_VACCW|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Western Reserve)
Query: 1 YVSIYSIGV 9
Y+SIY GV
Sbjct: 568 YLSIYGFGV 576
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YVSIYSIGV 9
Y+SIY GV
Sbjct: 568 YLSIYGFGV 576
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 YVSIYSIGV 9
Y+SIY GV
Sbjct: 568 YLSIYGFGV 576
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YVSIYSIGV 9
Y+SIY GV
Sbjct: 568 YLSIYGFGV 576
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 YVSIYSIGV 9
Y+SIY GV
Sbjct: 568 YLSIYGFGV 576
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 YVSIYSIGV 9
Y+SIY GV
Sbjct: 568 YLSIYGFGV 576
>sp|GP168_BPPH2|GENE product 16.8|Bacillus phage phi29 (Bacteriophage phi-29)
Query: 3 SIYSIGVA 10
+IY+IGVA
Sbjct: 46 NIYAIGVA 53
>sp|GN_EHV1V|ENVELOPE glycoprotein N|Equine herpesvirus 1 (strain V592)
Query: 1 YVSIYSIGVA 10
YVS+ ++GVA
Sbjct: 69 YVSLLAVGVA 78
>sp|GN_EHV1B|ENVELOPE glycoprotein N|Equine herpesvirus 1 (strain Ab4p)
Query: 1 YVSIYSIGVA 10
YVS+ ++GVA
Sbjct: 69 YVSLLAVGVA 78
27|SequenceR|140|131|IGQHDYVSIY
>sp|119R_IIV3|UNCHARACTERIZED protein 119R|Invertebrate iridescent virus 3 (IIV-3)
Query: 3 QHDYVS 8
QHDYVS
Sbjct: 36 QHDYVS 41
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 IGQHDYVSIY 10
I + DY+S+Y
Sbjct: 586 IAKKDYLSLY 595
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 IGQHDYVSIY 10
I + DY+S+Y
Sbjct: 586 IAKKDYLSLY 595
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 IGQHDYVSIY 10
I + DY+S+Y
Sbjct: 586 IAKKDYLSLY 595
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 IGQHDYVSIY 10
I + DY+S+Y
Sbjct: 586 IAKKDYLSLY 595
>sp|BP29_BPHC1|PUTATIVE baseplate protein gp29|Haemophilus phage HP1 (strain HP1c1)
Query: 1 IGQHDYVSIY 10
+GQH S+Y
Sbjct: 212 VGQHHIDSVY 221
28|SequenceR|145|136|NNRKFIGQHD
>sp|SEGE_BPT4|PUTATIVE endonuclease segE|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 NNRKFIGQH 9
N +K+IG+H
Sbjct: 13 NGKKYIGKH 21
29|SequenceR|150|141|DMLRSNNRKF
>sp|PAP1_CPRVZ|POLY(A) polymerase catalytic subunit|Nile crocodilepox virus (isolate
Query: 1 DMLRSNNRKF 10
DML++N+R F
Sbjct: 195 DMLQTNSRTF 204
>sp|YR860_MIMIV|UNCHARACTERIZED protein R860|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 DMLRSNNRKF 10
DM+ SNN +F
Sbjct: 91 DMVESNNNEF 100
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 2 MLRSNNRK 9
+LRS+NRK
Sbjct: 155 LLRSSNRK 162
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 MLRSNNRKF 10
+L+ NN+KF
Sbjct: 226 ILKCNNKKF 234
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 MLRSNNRKF 10
+L+ NN+KF
Sbjct: 225 ILKCNNKKF 233
30|SequenceR|155|146|QKLIEDMLRS
>sp|YR472_MIMIV|UNCHARACTERIZED protein R472|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 QKLIEDMLR 9
QK++ED +R
Sbjct: 1267 QKVVEDFIR 1275
>sp|M22_BRSVA|PROTEIN M2-2|Bovine respiratory syncytial virus (strain
Query: 1 QKLIEDMLR 9
Q+LIED+L+
Sbjct: 63 QELIEDVLK 71
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LIEDMLRS 10
LIED++RS
Sbjct: 690 LIEDVMRS 697
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LIEDMLRS 10
LIED++RS
Sbjct: 690 LIEDVMRS 697
31|SequenceR|160|151|LLEQQQKLIE
>sp|YL442_MIMIV|UNCHARACTERIZED protein L442|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 LLEQQQKLIE 10
+EQ+ KL+E
Sbjct: 793 FIEQEDKLVE 802
32|SequenceR|165|156|SCDLGLLEQQ
>sp|L_CPSVP|RNA-DIRECTED RNA polymerase L|Citrus psorosis virus (isolate Spain/P-121)
Query: 1 SCDLGLLEQQ 10
+C+ GLLEQ+
Sbjct: 508 TCNSGLLEQE 517
>sp|DPOL_NPVLD|DNA polymerase|Lymantria dispar multicapsid nuclear polyhedrosis
Query: 1 SCDLGLLEQQ 10
+C LGLL +Q
Sbjct: 790 ACALGLLAEQ 799
>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky
Query: 1 SCDLGLLEQ 9
SC LGL+E+
Sbjct: 228 SCALGLVEK 236
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 2 CDLGLLEQQ 10
C LGL+E++
Sbjct: 611 CKLGLIEEE 619
>sp|GAG_SIVCZ|GAG polyprotein|Simian immunodeficiency virus (isolate CPZ
Query: 1 SCDLGLLEQQ 10
+CD GL+E +
Sbjct: 45 ACDPGLMESK 54
33|SequenceR|170|161|EPSYKSCDLG
>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PSYKSCDLG 10
P++K C+LG
Sbjct: 40 PTHKMCELG 48
>sp|MATRX_PI3B|MATRIX protein|Bovine parainfluenza 3 virus (BPIV-3)
Query: 1 EPSYKSCDLG 10
+PSYK C G
Sbjct: 81 DPSYKVCGSG 90
>sp|YR588_MIMIV|UNCHARACTERIZED protein R588|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 PSYKSCDLG 10
P+Y+SC LG
Sbjct: 248 PNYESCFLG 256
>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PSYKSCDL 9
P YKSC L
Sbjct: 397 PHYKSCAL 404
>sp|PG047_VACCW|IMMUNE evasion protein OPG047|Vaccinia virus (strain Western Reserve)
Query: 2 PSYKSCDL 9
P YKSC L
Sbjct: 397 PHYKSCAL 404
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PSYKSCDL 9
P YKSC L
Sbjct: 393 PHYKSCAL 400
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 2 PSYKSCDL 9
P YKSC L
Sbjct: 397 PHYKSCAL 404
>sp|VF395_IIV3|UNCHARACTERIZED protein 001R|Invertebrate iridescent virus 3 (IIV-3)
Query: 2 PSYKSCD 8
PSY +CD
Sbjct: 73 PSYVTCD 79
>sp|CAPSD_LRVLG|MAJOR capsid protein|Leishmania RNA virus 1 -
Query: 1 EPSYKSCD 8
+PS +SCD
Sbjct: 515 QPSRRSCD 522
>sp|Y16C_BPT4|UNCHARACTERIZED 11.4 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 EPSYKSCDL 9
EP ++ CD+
Sbjct: 35 EPGFQFCDM 43
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 EPSYKSCDL 9
E Y+SCDL
Sbjct: 2660 ESIYQSCDL 2668
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 EPSYKSCDL 9
E Y+SCDL
Sbjct: 2660 ESIYQSCDL 2668
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 EPSYKSCDLG 10
E Y+SCDL
Sbjct: 2657 EDLYQSCDLA 2666
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 EPSYKSCDL 9
E Y+SCDL
Sbjct: 2657 EDLYQSCDL 2665
>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)
Query: 4 YKSCDL 9
+KSCDL
Sbjct: 2101 FKSCDL 2106
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 1 EPSYKSCDLG 10
+P YK C G
Sbjct: 81 DPGYKVCGSG 90
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 1 EPSYKSCDLG 10
E YK C LG
Sbjct: 14 ENLYKQCQLG 23
34|SequenceR|175|166|NSNAFEPSYK
>sp|VG77_BPML5|GENE 77 protein|Mycobacterium phage L5 (Mycobacteriophage L5)
Query: 4 AFEPSYK 10
AFEP YK
Sbjct: 141 AFEPRYK 147
>sp|RDRP_MYRV9|RNA-DIRECTED RNA polymerase VP1|Cryphonectria parasitica mycoreovirus 1 (strain
Query: 3 NAFEPSYK 10
N +EP+YK
Sbjct: 556 NVYEPTYK 563
>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)
Query: 2 SNAFEPSY 9
SNAF P Y
Sbjct: 164 SNAFGPRY 171
>sp|Y346_ABVP|PUTATIVE transmembrane protein ORF346|Acidianus bottle-shaped virus (isolate
Query: 1 NSNAFEPSY 9
N++AF P Y
Sbjct: 128 NNSAFSPPY 136
>sp|LTP_MHV68|LARGE tegument protein deneddylase|Murid herpesvirus 4 (MuHV-4) (Murine
Query: 3 NAFEPSYK 10
N F PSYK
Sbjct: 2037 NTFPPSYK 2044
>sp|MCP_ALHV1|MAJOR capsid protein|Alcelaphine herpesvirus 1 (strain C500)
Query: 2 SNAFEPSY 9
S AF+P+Y
Sbjct: 604 STAFDPTY 611
35|SequenceR|180|171|QDDKDNSNAF
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 1 QDDKDNSNAF 10
+DD DNS AF
Sbjct: 623 EDDGDNSQAF 632
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 1 QDDKDNSNAF 10
+DD DNS AF
Sbjct: 626 EDDGDNSQAF 635
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 2 DDKDNSNAF 10
+DKDN+NA+
Sbjct: 123 NDKDNANAY 131
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 2 DDKDNSNAF 10
+DKDN+NA+
Sbjct: 123 NDKDNANAY 131
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 3 DKDNSNAF 10
DKDN+NA+
Sbjct: 124 DKDNANAY 131
>sp|PG135_VACCC|VIRION membrane protein OPG135|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 QDDKDNSN 8
QDDK N+N
Sbjct: 71 QDDKKNTN 78
>sp|PG135_VAR67|VIRION membrane protein OPG135|Variola virus (isolate
Query: 1 QDDKDNSN 8
QDDK N+N
Sbjct: 71 QDDKKNTN 78
>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)
Query: 2 DDKDNSNAF 10
+DKDN N F
Sbjct: 1005 EDKDNLNIF 1013
36|SequenceR|185|176|HCNLVQDDKD
>sp|P4_PCVC|UNCHARACTERIZED protein p4|Penicillium chrysogenum virus (isolate Caston/2003)
Query: 2 CNLVQDD 8
CN+V DD
Sbjct: 255 CNMVADD 261
>sp|MVP_BTMV|P3N-PIPO polyprotein|Beet mosaic virus (BtMV)
Query: 2 CNLVQDDK 9
C +VQD+K
Sbjct: 340 CKIVQDNK 347
>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)
Query: 2 CNLVQDDK 9
C +VQD+K
Sbjct: 340 CKIVQDNK 347
>sp|YR379_MIMIV|UNCHARACTERIZED protein R379|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 CNLVQDDK 9
C+LV DDK
Sbjct: 11 CHLVNDDK 18
>sp|Y107_OSHVF|UNCHARACTERIZED protein ORF107|Ostreid herpesvirus 1 (isolate France)
Query: 1 HCNLVQDD 8
HC L +DD
Sbjct: 192 HCGLAEDD 199
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 1 HCNLVQDD 8
HC++ QD+
Sbjct: 75 HCDVFQDE 82
>sp|HEMA_I80A6|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/8/1980
Query: 1 HCNLVQDD 8
HC++ QD+
Sbjct: 91 HCDVFQDE 98
>sp|HEMA_I76A3|HEMAGGLUTININ A virus (strain A/Duck/Alberta/78/1976
Query: 1 HCNLVQDD 8
HC++ QD+
Sbjct: 91 HCDVFQDE 98
>sp|L_OLVVA|RNA-DIRECTED RNA polymerase L|Oliveros mammarenavirus (isolate
Query: 3 NLVQDDKD 10
NLVQ+D D
Sbjct: 1531 NLVQEDGD 1538
>sp|HEMA_I74A2|HEMAGGLUTININ A virus (strain A/Duck/Memphis/928/1974
Query: 1 HCNLVQDD 8
HC++ QD+
Sbjct: 91 HCDVFQDE 98
>sp|HEMA_I82A6|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/21/1982
Query: 1 HCNLVQDD 8
HC++ QD+
Sbjct: 75 HCDVFQDE 82
37|SequenceR|190|181|VKVALHCNLV
>sp|ENV_FIVWO|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate Wo)
Query: 1 VKVALHCN 8
VKV+L CN
Sbjct: 409 VKVSLQCN 416
>sp|ENV_FIVU1|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UT-113)
Query: 1 VKVALHCN 8
VKV+L CN
Sbjct: 411 VKVSLQCN 418
>sp|ENV_FIVT2|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate TM2)
Query: 1 VKVALHCN 8
VK++L CN
Sbjct: 411 VKISLQCN 418
>sp|ENV_FIVSD|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain San
Query: 1 VKVALHCN 8
VK++L CN
Sbjct: 411 VKISLQCN 418
>sp|MYBE_AVILE|P135GAG-MYB-ETS-TRANSFORMING protein|Avian leukemia virus E26
Query: 3 VALHCNLV 10
VALH N+V
Sbjct: 78 VALHVNIV 85
>sp|ENV_IPMAE|ENVELOPE glycoprotein|Mouse intracisternal a-particle MIAE (IAP-MIAE)
Query: 2 KVALHCNL 9
K+A HC+L
Sbjct: 158 KIAPHCSL 165
38|SequenceR|195|186|DEPSLVKVAL
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 DEPSLVKVA 9
DEP+++KV
Sbjct: 1623 DEPTIIKVG 1631
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 2 EPSLVKVAL 10
EP ++K+AL
Sbjct: 297 EPDMIKIAL 305
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 EPSLVKVAL 10
EP ++K+AL
Sbjct: 297 EPDMIKIAL 305
>sp|PG181_VACCW|PROTEIN OPG181|Vaccinia virus (strain Western Reserve)
Query: 2 EPSLVKVAL 10
EP ++K+AL
Sbjct: 297 EPDMIKIAL 305
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 2 EPSLVKVAL 10
EP ++K+AL
Sbjct: 297 EPDMIKIAL 305
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 EPSLVKVAL 10
EP ++K+AL
Sbjct: 297 EPDMIKIAL 305
>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)
Query: 2 EPSLVKVAL 10
EP ++K+AL
Sbjct: 293 EPDMIKIAL 301
>sp|YR578_MIMIV|PUTATIVE ankyrin repeat protein R578|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 EPSLVKVAL 10
+PSL+K A+
Sbjct: 387 DPSLIKTAI 395
39|SequenceR|200|191|IDAKGDEPSL
>sp|ICP46_FRG3G|IMMEDIATE-EARLY protein ICP-46|Frog virus 3 (isolate Goorha)
Query: 1 IDAKGDEPSL 10
+DA+G++P L
Sbjct: 242 LDARGEQPRL 251
>sp|Y148_TNAVC|UNCHARACTERIZED protein ORF148|Trichoplusia ni ascovirus 2c (TnAV-2c)
Query: 1 IDAKGDEP 8
+DAKG+ P
Sbjct: 247 VDAKGNRP 254
>sp|VP2_BRD|STRUCTURAL core protein VP2|Broadhaven virus (BRD)
Query: 1 IDAKGDEPS 9
+DA GD P+
Sbjct: 459 VDAVGDHPT 467
40|SequenceR|205|196|QAARVIDAKG
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 QAARVIDAKG 10
++ RV+DAKG
Sbjct: 494 KSMRVVDAKG 503
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QAARVIDAKG 10
++ RV+DAKG
Sbjct: 494 KSMRVVDAKG 503
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 1 QAARVIDAKG 10
++ RV+DAKG
Sbjct: 494 KSMRVVDAKG 503
41|SequenceR|210|201|LQCFDQAARV
>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1
Query: 1 LQCFDQ 6
LQCFDQ
Sbjct: 1113 LQCFDQ 1118
>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian
Query: 1 LQCFDQ 6
LQCFDQ
Sbjct: 1112 LQCFDQ 1117
>sp|BZLF1_EBVG|LYTIC switch protein BZLF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LQCFDQAARV 10
+Q FDQA RV
Sbjct: 23 VQAFDQATRV 32
>sp|BZLF1_EBVA8|LYTIC switch protein BZLF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LQCFDQAARV 10
+Q FDQA RV
Sbjct: 23 VQAFDQATRV 32
>sp|BZLF1_EBVB9|LYTIC switch protein BZLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LQCFDQAARV 10
+Q FDQA RV
Sbjct: 23 VQAFDQATRV 32
>sp|VU3_HHV7J|PROTEIN U3|Human herpesvirus 7 (strain JI)
Query: 1 LQCFDQAARV 10
L+CF AR+
Sbjct: 275 LKCFSDGARI 284
42|SequenceR|215|206|QKQAVLQCFD
>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1
Query: 3 QAVLQCFD 10
Q VLQCFD
Sbjct: 1110 QQVLQCFD 1117
>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian
Query: 3 QAVLQCFD 10
Q VLQCFD
Sbjct: 1109 QQVLQCFD 1116
>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)
Query: 3 QAVLQCFD 10
+ VLQCFD
Sbjct: 1038 EIVLQCFD 1045
>sp|L_SHRV|RNA-DIRECTED RNA polymerase L|Snakehead rhabdovirus (SHRV)
Query: 3 QAVLQCFD 10
QAV QC D
Sbjct: 580 QAVFQCLD 587
>sp|POLN_ABPVR|REPLICASE polyprotein|Acute bee paralysis virus (strain
Query: 2 KQAVLQCF 9
K+AVL CF
Sbjct: 1212 KEAVLLCF 1219
>sp|L_BCNVU|RNA-DIRECTED RNA polymerase L|Bear Canyon mammarenavirus (isolate Mouse/United
Query: 2 KQAVLQCFD 10
+Q +LQC D
Sbjct: 1300 EQFILQCLD 1308
43|SequenceR|220|211|DTPRKQKQAV
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 DTPRKQKQAV 10
D P+K+K+A+
Sbjct: 481 DPPKKRKEAM 490
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 DTPRKQKQAV 10
D P+K+K+A+
Sbjct: 481 DPPKKRKEAM 490
44|SequenceR|225|216|TDVDLDTPRK
>sp|YO22_ADEG1|UNCHARACTERIZED protein ORF22|Fowl adenovirus A serotype 1
Query: 2 DVDLDTPR 9
DVDLDT R
Sbjct: 166 DVDLDTQR 173
>sp|ENV_FIVT2|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate TM2)
Query: 2 DVDLDTPRK 10
D+D++TP++
Sbjct: 123 DIDIETPQE 131
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 5 LDTPRK 10
LDTPRK
Sbjct: 467 LDTPRK 472
>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)
Query: 1 TDVDLDTPRK 10
TD ++D P K
Sbjct: 448 TDAEVDVPEK 457
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 TDVDLDTPRK 10
+ + LDTPR+
Sbjct: 462 STIKLDTPRR 471
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 TDVDLDTPRK 10
+ + LDTPR+
Sbjct: 462 STIKLDTPRR 471
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 1 TDVDLDTPR 9
T+ LDTPR
Sbjct: 318 TETYLDTPR 326
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 1 TDVDLDTPR 9
T+ LDTPR
Sbjct: 319 TETYLDTPR 327
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 1 TDVDLDTPR 9
T+ LDTPR
Sbjct: 319 TETYLDTPR 327
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 1 TDVDLDTPR 9
T+ LDTPR
Sbjct: 319 TETYLDTPR 327
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 1 TDVDLDTPR 9
T+ LDTPR
Sbjct: 319 TETYLDTPR 327
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 1 TDVDLDTPR 9
T+ LDTPR
Sbjct: 319 TETYLDTPR 327
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 1 TDVDLDTPR 9
T+ LDTPR
Sbjct: 318 TETYLDTPR 326
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 1 TDVDLDTPR 9
T+ LDTPR
Sbjct: 318 TETYLDTPR 326
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 1 TDVDLDTPR 9
T+ LDTPR
Sbjct: 318 TETYLDTPR 326
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 1 TDVDLDTPR 9
T+ LDTPR
Sbjct: 319 TETYLDTPR 327
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 1 TDVDLDTPR 9
T+ LDTPR
Sbjct: 318 TETYLDTPR 326
>sp|POL2_BAYMJ|GENOME polyprotein 2|Barley yellow mosaic virus (strain
Query: 2 DVDLDT 7
DVDLDT
Sbjct: 293 DVDLDT 298
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 2 DVDLDTP 8
DVD++TP
Sbjct: 290 DVDIETP 296
45|SequenceR|230|221|LLSALTDVDL
***** No hits found ******
46|SequenceR|235|226|CGNSSLLSAL
>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CGNSSLLSAL 10
CG+S LLS +
Sbjct: 148 CGSSCLLSCV 157
>sp|TRX1_HHV6Z|TRIPLEX capsid protein 1|Human herpesvirus 6B (strain Z29)
Query: 1 CGNSSLLSAL 10
CG+S LLS +
Sbjct: 148 CGSSCLLSCV 157
>sp|TRX1_HHV6H|TRIPLEX capsid protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 1 CGNSSLLSAL 10
CG+S LLS +
Sbjct: 148 CGSSCLLSCV 157
47|SequenceR|240|231|LDPDPCGNSS
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 5 PCGNSS 10
PCGNSS
Sbjct: 780 PCGNSS 785
>sp|POL2_CPMVS|RNA2 polyprotein|Cowpea mosaic virus (strain SB)
Query: 1 LDPDPCGNS 9
+P+PCG+S
Sbjct: 586 FNPNPCGDS 594
>sp|POL2_SQMVM|RNA2 polyprotein|Squash mosaic virus (strain melon)
Query: 1 LDPDPCGNS 9
+P+PCG++
Sbjct: 578 FNPNPCGDA 586
>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 1 LDPDPCGNSS 10
L+ DPCG S
Sbjct: 176 LEADPCGKYS 185
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 1 LDPDPCGNSS 10
L+ DPCG S
Sbjct: 176 LEADPCGKYS 185
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 5 PCGNSS 10
PCGNS+
Sbjct: 773 PCGNST 778
>sp|ENV_SFVCP|ENVELOPE glycoprotein gp130|Simian foamy virus (isolate chimpanzee)
Query: 5 PCGNSS 10
PCGNS+
Sbjct: 779 PCGNST 784
>sp|YR229_MIMIV|PUTATIVE ankyrin repeat protein R229|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 DPDPCGNS 9
DPD C +S
Sbjct: 123 DPDSCASS 130
>sp|RDRP_RRSVT|RNA-DIRECTED RNA polymerase|Rice ragged stunt virus (isolate
Query: 3 PDPCGN 8
PD CGN
Sbjct: 56 PDICGN 61
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 3 PDPCG 7
PDPCG
Sbjct: 101 PDPCG 105
>sp|YOR5_BPSPP|UNCHARACTERIZED 10.3 kDa protein in|Bacillus phage SPP1 (Bacteriophage SPP1)
Query: 1 LDPDPCGN 8
LD DP GN
Sbjct: 39 LDYDPIGN 46
>sp|VL3_BPV4|PROBABLE protein L3|Bos taurus papillomavirus 4 (Bovine
Query: 1 LDPDPC 6
LD DPC
Sbjct: 17 LDEDPC 22
>sp|POL2_APMV|RNA2 polyprotein|Andean potato mottle virus (APMV)
Query: 1 LDPDPCG 7
+ P+PCG
Sbjct: 540 VSPNPCG 546
>sp|GB_BHV2B|ENVELOPE glycoprotein B|Bovine herpesvirus 2 (strain BMV)
Query: 3 PDPCGNSS 10
P+P GN+S
Sbjct: 105 PEPSGNAS 112
>sp|POL2_RCMV|RNA2 polyprotein|Red clover mottle virus (RCMV)
Query: 1 LDPDPCGNS 9
+P+PCG +
Sbjct: 533 FNPNPCGTA 541
>sp|CEP1_PSHV1|CYTOPLASMIC envelopment protein 1|Psittacid herpesvirus 1 (isolate Amazon
Query: 2 DPDPCGNSS 10
D + CGNS+
Sbjct: 90 DAEECGNSA 98
>sp|GP_INSV|ENVELOPMENT polyprotein|Impatiens necrotic spot virus (INSV)
Query: 3 PDPCGNSS 10
P+PC N+S
Sbjct: 87 PNPCLNAS 94
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 LDPDPCGNS 9
LD DP GN+
Sbjct: 2073 LDGDPKGNA 2081
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 LDPDPCGNS 9
LD DP GN+
Sbjct: 2073 LDGDPKGNA 2081
>sp|YL046_MIMIV|UNCHARACTERIZED protein L46|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 PDPCGN 8
P+PCG+
Sbjct: 114 PEPCGS 119
48|SequenceR|245|236|GFKLVLDPDP
>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)
Query: 3 KLVLDPDP 10
KL+ DPDP
Sbjct: 1398 KLIYDPDP 1405
>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)
Query: 3 KLVLDPDP 10
KL+ DPDP
Sbjct: 1398 KLIYDPDP 1405
>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)
Query: 3 KLVLDPDP 10
KL+ DPDP
Sbjct: 1398 KLIYDPDP 1405
>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)
Query: 3 KLVLDPDP 10
KL+ DPDP
Sbjct: 1398 KLIYDPDP 1405
>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)
Query: 3 KLVLDPDP 10
KL+ DPDP
Sbjct: 1398 KLIYDPDP 1405
>sp|PG204_VACCW|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 2 FKLVLDP 8
FKL+LDP
Sbjct: 252 FKLILDP 258
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen
Query: 2 FKLVLDP 8
FKL+LDP
Sbjct: 252 FKLILDP 258
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 2 FKLVLDP 8
FKL+LDP
Sbjct: 254 FKLILDP 260
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 2 FKLVLDP 8
FKL+LDP
Sbjct: 252 FKLILDP 258
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 GFKLVLDPD 9
G KLV DPD
Sbjct: 962 GGKLVFDPD 970
>sp|DPO22_BPK64|DEPOLYMERASE, capsule K25-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)
Query: 1 GFKLVLDPD 9
G KL++DP+
Sbjct: 42 GLKLLIDPN 50
>sp|NRAM_I73A0|NEURAMINIDASE A virus (strain A/Parrot/Ulster/1973
Query: 1 GFKLVLDPD 9
GF++V DP+
Sbjct: 370 GFEMVWDPN 378
>sp|L_EMARV|RNA-DIRECTED RNA polymerase L|European mountain ash ringspot-associated virus
Query: 2 FKLVLDPDP 10
F+L+ PDP
Sbjct: 583 FRLLQSPDP 591
>sp|PRIM_ASFWA|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate
Query: 1 GFKLVLDPD 9
GFK V DP+
Sbjct: 929 GFKCVQDPN 937
>sp|PRIM_ASFP4|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate
Query: 1 GFKLVLDPD 9
GFK V DP+
Sbjct: 929 GFKCVQDPN 937
>sp|PRIM_ASFM2|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate
Query: 1 GFKLVLDPD 9
GFK V DP+
Sbjct: 923 GFKCVQDPN 931
>sp|PRIM_ASFK5|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate
Query: 1 GFKLVLDPD 9
GFK V DP+
Sbjct: 918 GFKCVQDPN 926
>sp|PRIM_ASFB7|PUTATIVE helicase/primase complex protein|African swine fever virus (strain
Query: 1 GFKLVLDPD 9
GFK V DP+
Sbjct: 929 GFKCVQDPN 937
>sp|UL15B_PSHV1|LARGE terminase protein homolog UL15b|Psittacid herpesvirus 1 (isolate
Query: 1 GFKLVLDPDP 10
GF+L P+P
Sbjct: 63 GFELAAQPEP 72
>sp|CAPSD_BFDV|CAPSID protein|Beak and feather disease virus
Query: 1 GFKLVLDPDP 10
GFK +L P P
Sbjct: 161 GFKRLLRPKP 170
>sp|CAPSP_BPT4|CAPSID vertex protein|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 GFKLVLDPD 9
FK+V+DP+
Sbjct: 359 AFKVVVDPE 367
>sp|CAPSP_BPAR1|CAPSID vertex protein|Escherichia phage AR1 (Bacteriophage AR1)
Query: 1 GFKLVLDPD 9
FK+V+DP+
Sbjct: 359 AFKVVVDPE 367
>sp|YL272_MIMIV|PUTATIVE BTB/POZ domain-containing protein L272|Acanthamoeba polyphaga
Query: 2 FKLVLDPD 9
+KL+++PD
Sbjct: 113 YKLIVEPD 120
>sp|TAP51_BPT4|BASEPLATE hub assembly protein gp51|Enterobacteria phage T4 (Bacteriophage
Query: 2 FKLVLDPD 9
FKL+++PD
Sbjct: 200 FKLLVNPD 207
>sp|YL178_MIMIV|UNCHARACTERIZED protein L178|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 GFKLVLDPD 9
G+KL LD D
Sbjct: 26 GYKLYLDDD 34
>sp|CEP1_EHV2|CYTOPLASMIC envelopment protein 1|Equine herpesvirus 2 (strain 86/87)
Query: 2 FKLVLDPD 9
FKL DPD
Sbjct: 216 FKLCSDPD 223
49|SequenceR|250|241|TSDVPGFKLV
>sp|VP51_BPAPS|PUTATIVE protein p51|Acyrthosiphon pisum secondary endosymbiont phage
Query: 4 VPGFKLV 10
VPGFKLV
Sbjct: 334 VPGFKLV 340
>sp|P21_GLRV3|PROTEIN P21|Grapevine leafroll-associated virus 3 (isolate
Query: 1 TSDVPGFK 8
+SD PGFK
Sbjct: 178 SSDYPGFK 185
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 SDVPGFKLV 10
SD P FK+V
Sbjct: 265 SDYPNFKIV 273
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 SDVPGFKLV 10
SD P FK+V
Sbjct: 265 SDYPNFKIV 273
>sp|SERDT_BPSAV|SERINYLTRANSFERASE phage ViI
Query: 3 DVPGFKL 9
DVPGF L
Sbjct: 205 DVPGFML 211
>sp|VF391_IIV6|UNCHARACTERIZED protein 391R|Invertebrate iridescent virus 6 (IIV-6)
Query: 2 SDVPGFKL 9
+D+P FKL
Sbjct: 147 NDIPNFKL 154
>sp|PP220_ASFWA|POLYPROTEIN pp220|African swine fever virus (isolate
Query: 2 SDVPGFKLV 10
SD+PG +L+
Sbjct: 1857 SDMPGVQLI 1865
>sp|PP220_ASFP4|POLYPROTEIN pp220|African swine fever virus (isolate
Query: 2 SDVPGFKLV 10
SD+PG +L+
Sbjct: 1857 SDMPGVQLI 1865
>sp|PP220_ASFM2|POLYPROTEIN pp220|African swine fever virus (isolate
Query: 2 SDVPGFKLV 10
SD+PG +L+
Sbjct: 1857 SDMPGVQLI 1865
>sp|PP220_ASFK5|POLYPROTEIN pp220|African swine fever virus (isolate
Query: 2 SDVPGFKLV 10
SD+PG +L+
Sbjct: 1857 SDMPGVQLI 1865
>sp|PP220_ASFB7|POLYPROTEIN pp220|African swine fever virus (strain
Query: 2 SDVPGFKLV 10
SD+PG +L+
Sbjct: 1858 SDMPGVQLI 1866
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 TSDVPG 6
TSD+PG
Sbjct: 1609 TSDIPG 1614
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 SDVPGFKLV 10
SD+P +KL+
Sbjct: 357 SDLPAYKLM 365
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 SDVPGFKLV 10
SD+P +KL+
Sbjct: 357 SDLPAYKLM 365
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 SDVPGFKLV 10
SD+P +KL+
Sbjct: 357 SDLPAYKLM 365
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 SDVPGFKLV 10
SD+P +KL+
Sbjct: 357 SDLPAYKLM 365
>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus
Query: 1 TSDVPGF 7
T+D+PGF
Sbjct: 305 TNDLPGF 311
50|SequenceR|255|246|PLFGLTSDVP
>sp|DPOL1_BPK54|DEPOLYMERASE 1, capsule K8-specific|Klebsiella phage K5-4 (Bacteriophage K5-4)
Query: 2 LFGLTSDVP 10
L GL+SD+P
Sbjct: 723 LTGLSSDIP 731
>sp|YR450_MIMIV|UNCHARACTERIZED protein R450|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 LFGLTSDVP 10
L+GLT D P
Sbjct: 260 LYGLTPDEP 268
51|SequenceR|260|251|LRIHWPLFGL
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LRIHWPLFG 9
LRIH PLFG
Sbjct: 220 LRIHVPLFG 228
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LRIHWPLFG 9
LRIH PLFG
Sbjct: 220 LRIHVPLFG 228
>sp|DPOL_GSHV|PROTEIN P|Ground squirrel hepatitis virus (strain
Query: 2 RIHWPLFGL 10
R+HWP F +
Sbjct: 439 RVHWPKFAV 447
>sp|DPOL_WHV2|PROTEIN P|Woodchuck hepatitis B virus (isolate
Query: 2 RIHWPLFGL 10
R+HWP F +
Sbjct: 441 RVHWPKFAV 449
>sp|DPOL_WHV4|PROTEIN P|Woodchuck hepatitis B virus (isolate
Query: 2 RIHWPLFGL 10
R+HWP F +
Sbjct: 442 RVHWPKFAV 450
>sp|DPOL_WHV3|PROTEIN P|Woodchuck hepatitis B virus (isolate
Query: 2 RIHWPLFGL 10
R+HWP F +
Sbjct: 442 RVHWPKFAV 450
>sp|RDRP_FHV|RNA-DIRECTED RNA polymerase|Flock house virus (FHV)
Query: 2 RIHWPL 7
R+HWP+
Sbjct: 396 RVHWPV 401
>sp|RDRP_BOOLV|RNA-DIRECTED RNA polymerase|Boolarra virus (BoV)
Query: 2 RIHWPL 7
R+HWP+
Sbjct: 396 RVHWPV 401
>sp|RDRP_BBV|RNA-DIRECTED RNA polymerase|Black beetle virus (BBV)
Query: 2 RIHWPL 7
R+HWP+
Sbjct: 396 RVHWPV 401
>sp|DPOL_ASHV|PROTEIN P|Arctic squirrel hepatitis virus (ASHV)
Query: 2 RIHWPLFGL 10
R+HWP F +
Sbjct: 437 RVHWPKFAV 445
>sp|DPOL_WHV5|PROTEIN P|Woodchuck hepatitis B virus (isolate
Query: 2 RIHWPLFGL 10
R+HWP F +
Sbjct: 442 RVHWPKFAV 450
>sp|DPOL_WHV1|PROTEIN P|Woodchuck hepatitis B virus (isolate
Query: 2 RIHWPLFGL 10
R+HWP F +
Sbjct: 437 RVHWPKFAV 445
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 IHWPLF 8
+HWP+F
Sbjct: 547 MHWPIF 552
>sp|DPOL_WHV6|PROTEIN P|Woodchuck hepatitis B virus (isolate
Query: 2 RIHWPLFGL 10
R+HWP F +
Sbjct: 114 RVHWPKFAV 122
>sp|P3_PCVC|UNCHARACTERIZED protein p3|Penicillium chrysogenum virus (isolate Caston/2003)
Query: 1 LRIHWPLFGL 10
L +HW ++GL
Sbjct: 383 LLLHWKMYGL 392
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 3 IHWPLFG 9
++WPL+G
Sbjct: 271 VNWPLYG 277
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 3 IHWPLFG 9
++WPL+G
Sbjct: 271 VNWPLYG 277
>sp|1A_OLV2I|REPLICATION protein 1a|Olive latent virus 2 (isolate
Query: 1 LRIHWPLF 8
LR +WP F
Sbjct: 56 LRFNWPCF 63
>sp|CAPSD_MPRVN|MAJOR inner capsid protein VP3|Micromonas pusilla reovirus (isolate
Query: 2 RIHWPLF 8
R+HW LF
Sbjct: 764 RLHWYLF 770
>sp|GTRA_BPSFX|BACTOPRENOL-LINKED glucose translocase|Shigella phage SfX (Shigella flexneri
Query: 3 IHWPLFGL 10
IHW +FG+
Sbjct: 18 IHWVVFGV 25
>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)
Query: 2 RIHWPLFGL 10
R H PLFG+
Sbjct: 976 RDHTPLFGV 984
>sp|VG60_ICHVA|UNCHARACTERIZED protein ORF60|Ictalurid herpesvirus 1 (strain Auburn)
Query: 3 IHWPLFGL 10
I+W LFGL
Sbjct: 246 INWFLFGL 253
>sp|H962L_ASFP4|PUTATIVE RNA Helicase B962L|African swine fever virus (isolate
Query: 4 HWPLF 8
HWPL+
Sbjct: 240 HWPLY 244
>sp|H962L_ASFWA|PUTATIVE RNA Helicase B962L|African swine fever virus (isolate
Query: 4 HWPLF 8
HWPL+
Sbjct: 240 HWPLY 244
>sp|H962L_ASFK5|PUTATIVE RNA Helicase B962L|African swine fever virus (isolate
Query: 4 HWPLF 8
HWPL+
Sbjct: 240 HWPLY 244
>sp|H962L_ASFB7|PUTATIVE RNA helicase B962L|African swine fever virus (strain
Query: 4 HWPLF 8
HWPL+
Sbjct: 240 HWPLY 244
>sp|H962L_ASFM2|PUTATIVE RNA Helicase B962L|African swine fever virus (isolate
Query: 4 HWPLF 8
HWPL+
Sbjct: 240 HWPLY 244
>sp|GTRA_BPSF2|BACTOPRENOL-LINKED glucose translocase|Shigella phage SfII (Shigella flexneri
Query: 3 IHWPLFGL 10
IHW +FG+
Sbjct: 18 IHWVVFGV 25
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 IHWPLFGL 10
+HW FG+
Sbjct: 2049 VHWTAFGV 2056
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 IHWPLFGL 10
+HW FG+
Sbjct: 2048 VHWTAFGV 2055
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 IHWPLFGL 10
+HW FG+
Sbjct: 2048 VHWTAFGV 2055
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 3 IHWPLFGL 10
+HW FG+
Sbjct: 2048 VHWTAFGV 2055
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 IHWPLFGL 10
+HW FG+
Sbjct: 2046 VHWTAFGV 2053
>sp|GTRA_BPSF5|BACTOPRENOL-LINKED glucose translocase|Shigella phage SfV (Shigella flexneri
Query: 3 IHWPLFGL 10
IHW +FG+
Sbjct: 18 IHWVVFGV 25
>sp|GAG_AVISN|GAG polyprotein|Avian spleen necrosis virus
Query: 3 IHWPLFGL 10
+ WP FG+
Sbjct: 45 LEWPTFGV 52
>sp|RDRP_NODAM|RNA-DIRECTED RNA polymerase|Nodamura virus (strain Mag115) (NoV)
Query: 2 RIHWP 6
++HWP
Sbjct: 404 KVHWP 408
>sp|YR818_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R818|Acanthamoeba
Query: 5 WPLFGL 10
WP FG+
Sbjct: 566 WPYFGI 571
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 2 RIHWPLFG 9
R+HW L+
Sbjct: 477 RLHWELYA 484
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|ENV_CAEVG|ENVELOPE glycoprotein|Caprine arthritis encephalitis virus (strain
Query: 4 HWPLFGL 10
HWPL+ +
Sbjct: 151 HWPLWQM 157
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|ENV_CAEVC|ENVELOPE glycoprotein|Caprine arthritis encephalitis virus (strain
Query: 4 HWPLFGL 10
HWPL+ +
Sbjct: 154 HWPLWQM 160
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|ENV_OMVVS|ENVELOPE glycoprotein gp160|Ovine maedi visna related virus
Query: 4 HWPLFGL 10
HWPL+ +
Sbjct: 182 HWPLWQM 188
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 RIHWPLFGL 10
R++WP F +
Sbjct: 401 RVYWPKFAV 409
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 5 WPLFG 9
WPL+G
Sbjct: 83 WPLYG 87
>sp|ENV_VILVK|ENVELOPE glycoprotein gp160|Maedi visna virus (strain KV1772)
Query: 4 HWPLFGL 10
HWPL+ +
Sbjct: 181 HWPLWQM 187
>sp|ENV_VILV2|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514
Query: 4 HWPLFGL 10
HWPL+ +
Sbjct: 181 HWPLWQM 187
>sp|ENV_VILV1|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514
Query: 4 HWPLFGL 10
HWPL+ +
Sbjct: 181 HWPLWQM 187
>sp|ENV_VILV|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514)
Query: 4 HWPLFGL 10
HWPL+ +
Sbjct: 181 HWPLWQM 187
52|SequenceR|265|256|SVIETLRIHW
>sp|GP2_EHV1V|GLYCOPROTEIN gp2|Equine herpesvirus 1 (strain V592)
Query: 1 SVIETLRIHW 10
+++ TLR+ W
Sbjct: 683 ALVSTLRVPW 692
>sp|GP2_EHV1B|GLYCOPROTEIN gp2|Equine herpesvirus 1 (strain Ab4p)
Query: 1 SVIETLRIHW 10
+++ TLR+ W
Sbjct: 614 ALVSTLRVPW 623
>sp|GP2_EHV1D|GLYCOPROTEIN gp2|Equine herpesvirus 1 (strain Kentucky
Query: 1 SVIETLRIHW 10
+++ TLR+ W
Sbjct: 109 ALVSTLRVPW 118
>sp|GP2_EHV1K|GLYCOPROTEIN gp2|Equine herpesvirus 1 (strain Kentucky
Query: 1 SVIETLRIHW 10
+++ TLR+ W
Sbjct: 200 ALVSTLRVPW 209
53|SequenceR|270|261|LHSPLSVIET
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LHSPLSVIET 10
LH P+S IET
Sbjct: 580 LHFPISPIET 589
54|SequenceR|275|266|EYSINLHSPL
>sp|POLG_PPVEA|GENOME polyprotein|Plum pox potyvirus (strain El
Query: 2 YSINLHSP 9
YS+NLH P
Sbjct: 880 YSLNLHCP 887
>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK
Query: 2 YSINLHSP 9
YS+NLH P
Sbjct: 2504 YSLNLHCP 2511
>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)
Query: 2 YSINLHSP 9
YS+NLH P
Sbjct: 2504 YSLNLHCP 2511
>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)
Query: 2 YSINLHSP 9
YS+NLH P
Sbjct: 2505 YSLNLHCP 2512
>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)
Query: 2 YSINLHSP 9
YS+NLH P
Sbjct: 2504 YSLNLHCP 2511
>sp|TERL_BPP7|PROBABLE terminase, large subunit|Enterobacteria phage P7 (Bacteriophage P7)
Query: 4 INLHSP 9
+NLHSP
Sbjct: 451 LNLHSP 456
>sp|TERL_BPP1|PROBABLE terminase, large subunit|Escherichia phage P1 (Bacteriophage P1)
Query: 4 INLHSP 9
+NLHSP
Sbjct: 451 LNLHSP 456
>sp|VG02_ICHVA|UNCHARACTERIZED protein ORF2|Ictalurid herpesvirus 1 (strain Auburn)
Query: 3 SINLHSPL 10
S+ LH+PL
Sbjct: 397 SVELHAPL 404
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 2 YSINLHSPL 10
YS LHSP+
Sbjct: 164 YSRTLHSPM 172
55|SequenceR|280|271|ASFFDEYSIN
>sp|CAPSD_TBSVB|CAPSID protein|Tomato bushy stunt virus (strain
Query: 1 ASFFDEYSIN 10
AS FD+YS N
Sbjct: 149 ASNFDQYSFN 158
>sp|CAPSD_AMCV|CAPSID protein|Artichoke mottled crinkle virus (AMCV)
Query: 1 ASFFDEYSIN 10
AS FD+YS N
Sbjct: 149 ASNFDQYSFN 158
>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)
Query: 1 ASFFDEYS 8
A+FFDE S
Sbjct: 708 ATFFDEVS 715
>sp|MATA2_BPMX1|MATURATION protein A2|Qbeta virus (strain MX1)
Query: 1 ASFFDEYSIN 10
SFFD Y N
Sbjct: 47 GSFFDSYGTN 56
>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)
Query: 1 ASFFDEYS 8
ASFF +YS
Sbjct: 1473 ASFFPDYS 1480
>sp|VP74_NPVCF|PROTEIN p74|Choristoneura fumiferana nuclear polyhedrosis virus
Query: 1 ASFFDEYSI 9
ASF +EYS+
Sbjct: 346 ASFLEEYSL 354
>sp|A18_ECTVM|TRANSCRIPT termination protein A18|Ectromelia virus (strain Moscow) (ECTV)
Query: 2 SFFDEYSIN 10
SFFD YS +
Sbjct: 267 SFFDPYSTD 275
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 FFDEYS 8
FFD+YS
Sbjct: 1349 FFDQYS 1354
56|SequenceR|285|276|AYQRLASFFD
>sp|NTP1_FOWPN|NUCLEOSIDE triphosphatase I|Fowlpox virus (strain NVSL) (FPV)
Query: 2 YQRLASFF 9
YQR+AS F
Sbjct: 291 YQRMASTF 298
>sp|RDRP_SCVLA|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-A
Query: 1 AYQRLASFFD 10
AY +LA FD
Sbjct: 1204 AYMKLAGVFD 1213
57|SequenceR|293|281|KGLRQECAAYQRL
>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
Query: 3 LRQECAAYQR 12
L+Q CA+Y R
Sbjct: 2954 LKQYCASYNR 2963
>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
Query: 3 LRQECAAYQR 12
L+Q CA+Y R
Sbjct: 2954 LKQYCASYNR 2963
>sp|SPIKE_BRV1|SPIKE glycoprotein|Breda virus 1 (BRV-1)
Query: 1 KGLRQECAAYQRL 13
K LRQ+ A Y L
Sbjct: 323 KSLRQQSATYSAL 335
>sp|RDRP_SCV23|RNA-DIRECTED RNA polymerase|Saccharomyces 23S RNA narnavirus (ScNV-23S)
Query: 3 LRQECAAYQRL 13
L+QECA +R+
Sbjct: 144 LKQECADLRRV 154
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 KGLRQECAAYQR 12
KG+R E Y R
Sbjct: 502 KGVRSETMCYNR 513
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KGLRQECAAYQR 12
KG+R E Y R
Sbjct: 502 KGVRSETMCYNR 513
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 1 KGLRQECAAYQR 12
KG+R E Y R
Sbjct: 502 KGVRSETMCYNR 513
>sp|MB43_GAHVM|MEMBRANE protein UL43 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 KGLRQECAAY 10
KG++Q AAY
Sbjct: 389 KGIKQLAAAY 398
>sp|RIR1_PSHV1|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Psittacid herpesvirus 1 (isolate Amazon
Query: 1 KGLRQECAAY 10
+GL +ECA +
Sbjct: 118 RGLSRECAEF 127
>sp|THYX_PBCV1|PROBABLE flavin-dependent thymidylate synthase|Paramecium bursaria Chlorella
Query: 1 KGLRQECAAY 10
KG+ +ECA +
Sbjct: 147 KGIAKECARF 156
THE END