1|Sequence|1|10|MTGLYELVWR
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 LYELVW 9
LY LVW
Sbjct: 248 LYRLVW 253
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 4 LYELVW 9
LY LVW
Sbjct: 248 LYRLVW 253
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 1 MTGLYELVW 9
+TG+Y VW
Sbjct: 464 ITGVYADVW 472
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 MTGLYELVW 9
+TG+Y VW
Sbjct: 464 ITGVYADVW 472
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 897 TGVYPFMW 904
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 897 TGVYPFMW 904
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 898 TGVYPFMW 905
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 898 TGVYPFMW 905
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 890 TGVYPFMW 897
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 890 TGVYPFMW 897
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 890 TGVYPFMW 897
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 888 TGVYPFMW 895
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 897 TGVYPFMW 904
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 894 TGVYPFMW 901
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 895 TGVYPFMW 902
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 894 TGVYPFMW 901
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 895 TGVYPFMW 902
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 883 TGVYPFMW 890
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 883 TGVYPFMW 890
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 881 TGVYPFMW 888
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 880 TGVYPFMW 887
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 891 TGVYPFMW 898
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 891 TGVYPFMW 898
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 891 TGVYPFMW 898
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 TGLYELVW 9
TG+Y +W
Sbjct: 882 TGVYPFMW 889
>sp|VE6_HPV18|PROTEIN E6|Human papillomavirus type 18
Query: 2 TGLYELVWR 10
TGLY L+ R
Sbjct: 96 TGLYNLLIR 104
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 2 TGLYELVW 9
TG Y L W
Sbjct: 298 TGAYTLSW 305
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 TGLYELVW 9
+GL++ +W
Sbjct: 404 SGLFDAIW 411
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 TGLYELVW 9
+GL++ +W
Sbjct: 404 SGLFDAIW 411
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 TGLYEL 7
TG+YEL
Sbjct: 309 TGVYEL 314
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 3 GLYELVW 9
G+Y L W
Sbjct: 240 GMYYLAW 246
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 3 GLYELVW 9
G+Y L W
Sbjct: 240 GMYYLAW 246
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 4 LYELVWR 10
LY+L W+
Sbjct: 1956 LYKLYWK 1962
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GLYELVW 9
G YE VW
Sbjct: 142 GRYETVW 148
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GLYELVW 9
G YE VW
Sbjct: 142 GRYETVW 148
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 3 GLYELVW 9
GLY +W
Sbjct: 409 GLYSSIW 415
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 3 GLYELVW 9
GLY +W
Sbjct: 409 GLYSSIW 415
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 3 GLYELVW 9
GLY +W
Sbjct: 409 GLYSSIW 415
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 3 GLYELVW 9
GLY +W
Sbjct: 409 GLYSSIW 415
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 MTGLYELV 8
+TG YE V
Sbjct: 364 LTGYYEAV 371
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 MTGLYELV 8
+TG YE V
Sbjct: 364 LTGYYEAV 371
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 MTGLYELV 8
+TG YE V
Sbjct: 364 LTGYYEAV 371
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 MTGLYELV 8
+TG YE V
Sbjct: 364 LTGYYEAV 371
>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56
Query: 4 LYELVW 9
+Y LVW
Sbjct: 303 VYRLVW 308
2|Sequence|6|15|ELVWRVLHAL
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 2 LVWRVLHA 9
L+WR+L++
Sbjct: 374 LLWRILNS 381
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 LVWRVLHA 9
LVW+ LH+
Sbjct: 500 LVWQGLHS 507
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LVWRVLHA 9
L+WR+L++
Sbjct: 374 LLWRILNS 381
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 WRVLHAL 10
W++LH +
Sbjct: 3328 WKILHCI 3334
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 WRVLHAL 10
W++LH +
Sbjct: 3240 WKILHCI 3246
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 4 WRVLHA 9
WR LH+
Sbjct: 559 WRYLHS 564
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 VWRVLHA 9
++RVLH+
Sbjct: 126 IYRVLHS 132
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 VWRVLHA 9
++RVLH+
Sbjct: 126 IYRVLHS 132
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 VWRVLHA 9
++RVLH+
Sbjct: 126 IYRVLHS 132
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 4 WRVLHA 9
WR LH
Sbjct: 105 WRCLHG 110
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 4 WRVLHA 9
WR LH
Sbjct: 105 WRCLHG 110
3|Sequence|11|20|VLHALLCLHR
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 HALLCL 8
HA LCL
Sbjct: 3633 HAFLCL 3638
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 HALLCL 8
HA LCL
Sbjct: 3610 HAFLCL 3615
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 HALLCL 8
HA LCL
Sbjct: 3633 HAFLCL 3638
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 HALLCL 8
HA LCL
Sbjct: 3610 HAFLCL 3615
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 5 LLCLH 9
LLCLH
Sbjct: 76 LLCLH 80
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 5 LLCLH 9
LLCLH
Sbjct: 76 LLCLH 80
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 5 LLCLHR 10
LLCL+R
Sbjct: 144 LLCLYR 149
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 5 LLCLHR 10
LLCL+R
Sbjct: 144 LLCLYR 149
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 VLHALLCLHR 10
V+ +++C+H+
Sbjct: 557 VVFSIVCMHK 566
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 VLHALLCL 8
++ ALLCL
Sbjct: 268 IVSALLCL 275
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 5 LLCLH 9
+LCLH
Sbjct: 76 MLCLH 80
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 5 LLCLH 9
+LCLH
Sbjct: 76 MLCLH 80
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 5 LLCLH 9
+LCLH
Sbjct: 76 MLCLH 80
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 5 LLCLH 9
+LCLH
Sbjct: 76 MLCLH 80
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 5 LLCLH 9
+LCLH
Sbjct: 76 MLCLH 80
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 6 LCLHR 10
LCLHR
Sbjct: 113 LCLHR 117
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 6 LCLHR 10
LCLHR
Sbjct: 113 LCLHR 117
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 6 LCLHR 10
LCLHR
Sbjct: 113 LCLHR 117
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 6 LCLHR 10
LCLHR
Sbjct: 113 LCLHR 117
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 6 LCLHR 10
LCLHR
Sbjct: 113 LCLHR 117
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 6 LCLHR 10
LCLHR
Sbjct: 113 LCLHR 117
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 6 LCLHR 10
LCLHR
Sbjct: 113 LCLHR 117
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 6 LCLHR 10
LCLHR
Sbjct: 113 LCLHR 117
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 6 LCLHR 10
LCLHR
Sbjct: 113 LCLHR 117
4|Sequence|16|25|LCLHRTLTSW
>sp|YVCC_VACCC|UNCHARACTERIZED 9.2 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CLHRTLTSW 10
CLHR LTS
Sbjct: 59 CLHRALTSM 67
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 LCLHRT 6
LCLHRT
Sbjct: 113 LCLHRT 118
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 LCLHRT 6
LCLHRT
Sbjct: 113 LCLHRT 118
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 LCLHRT 6
LCLHRT
Sbjct: 113 LCLHRT 118
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 LCLHRT 6
LCLHRT
Sbjct: 113 LCLHRT 118
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 LCLHRT 6
LCLHRT
Sbjct: 113 LCLHRT 118
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 LCLHRT 6
LCLHRT
Sbjct: 113 LCLHRT 118
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 LCLHRT 6
LCLHRT
Sbjct: 113 LCLHRT 118
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 LCLHRT 6
LCLHRT
Sbjct: 113 LCLHRT 118
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 LCLHRT 6
LCLHRT
Sbjct: 113 LCLHRT 118
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 HRTLTSW 10
HR+ T W
Sbjct: 2814 HRSFTQW 2820
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 HRTLTSW 10
HR+ T W
Sbjct: 2814 HRSFTQW 2820
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 LCLHRTLT 8
+CLH T T
Sbjct: 1348 ICLHTTYT 1355
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 5 RTLTSW 10
RTL SW
Sbjct: 83 RTLVSW 88
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 RTLTSW 10
RTL SW
Sbjct: 83 RTLVSW 88
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 5 RTLTSW 10
RTL SW
Sbjct: 83 RTLVSW 88
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 RTLTSW 10
RTL SW
Sbjct: 83 RTLVSW 88
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 5 RTLTSW 10
RTL SW
Sbjct: 83 RTLVSW 88
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 5 RTLTSW 10
RTL SW
Sbjct: 83 RTLVSW 88
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 LCLHRTLT 8
+C+H T T
Sbjct: 1347 ICMHSTYT 1354
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 2 CLHRT 6
CLHRT
Sbjct: 434 CLHRT 438
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 2 CLHRT 6
CLHRT
Sbjct: 435 CLHRT 439
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 CLHRT 6
CLHRT
Sbjct: 435 CLHRT 439
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 2 CLHRT 6
CLHRT
Sbjct: 434 CLHRT 438
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 3 LHRTLTSW 10
H T+T W
Sbjct: 293 FHTTMTLW 300
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 3 LHRTLTSW 10
H T+T W
Sbjct: 292 FHTTMTLW 299
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 3 LHRTLTSW 10
H T+T W
Sbjct: 292 FHTTMTLW 299
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 3 LHRTLTSW 10
H T+T W
Sbjct: 292 FHTTMTLW 299
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 LHRTLTSW 10
H T+T W
Sbjct: 293 FHTTMTLW 300
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 LHRTLTSW 10
H T+T W
Sbjct: 292 FHTTMTLW 299
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 3 LHRTLTSW 10
H T+T W
Sbjct: 292 FHTTMTLW 299
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 3 LHRTLTSW 10
H T+T W
Sbjct: 292 FHTTMTLW 299
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 HRTLTSW 10
H+TLTS+
Sbjct: 714 HQTLTSF 720
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 2 CLHRTLTSW 10
CL+++ +SW
Sbjct: 135 CLNKSDSSW 143
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 CLHRTLTS 9
C H T+TS
Sbjct: 345 CYHATVTS 352
>sp|VE7_HPV52|PROTEIN E7|Human papillomavirus 52
Query: 1 LCLHRTLTS 9
LC+H T T
Sbjct: 69 LCIHSTATD 77
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 3 LHRTLTSW 10
L+R L SW
Sbjct: 336 LYRKLYSW 343
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LHRTLTSW 10
L+R L SW
Sbjct: 336 LYRKLYSW 343
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 HRTLTSW 10
H+TLTS+
Sbjct: 729 HQTLTSF 735
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CLHRTL 7
CLH T+
Sbjct: 84 CLHHTM 89
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 3 LHRTLTSW 10
L+R L SW
Sbjct: 52 LYRKLYSW 59
5|Sequence|21|30|TLTSWLRVRF
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 1 TLTSWLRVR 9
T+T+WLR +
Sbjct: 143 TITAWLRCK 151
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 TLTSWLRVR 9
T+T+WLR +
Sbjct: 143 TITAWLRCK 151
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 1 TLTSWLRVR 9
T+T+WLR +
Sbjct: 143 TITAWLRCK 151
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 TLTSWLRVR 9
T+T+WLR +
Sbjct: 143 TITAWLRCK 151
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 1 TLTSWLRVR 9
T+T+WLR +
Sbjct: 143 TITAWLRCK 151
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 3 TSWLRVRF 10
TS+++VRF
Sbjct: 199 TSYIKVRF 206
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 LTSWLRVR 9
LTSWL R
Sbjct: 647 LTSWLAKR 654
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 LTSWLRVR 9
LTSWL R
Sbjct: 647 LTSWLAKR 654
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 LTSWLRVR 9
LTSWL R
Sbjct: 647 LTSWLAKR 654
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 1 TLTSWLRV 8
TLT+W+ +
Sbjct: 375 TLTTWIDI 382
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 4 SWLRVR 9
+W+RVR
Sbjct: 257 TWVRVR 262
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 4 SWLRVR 9
+W+RVR
Sbjct: 257 TWVRVR 262
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 1 TLTSWLR 7
T+T W+R
Sbjct: 532 TVTGWVR 538
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 4 SWLRVR 9
+W+RVR
Sbjct: 226 TWVRVR 231
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 4 SWLRVR 9
+W+RVR
Sbjct: 226 TWVRVR 231
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 4 SWLRVR 9
+W+RVR
Sbjct: 225 TWVRVR 230
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 TLTSWLRVR 9
T WLR+R
Sbjct: 659 TTNIWLRLR 667
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 3 TSWLRVRF 10
T W +++F
Sbjct: 56 TEWTKIKF 63
6|Sequence|26|35|LRVRFGTWNW
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 5 FGTWN 9
FGTWN
Sbjct: 74 FGTWN 78
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 5 FGTWN 9
FGTWN
Sbjct: 74 FGTWN 78
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 1 LRVRFGTWNW 10
L FGT++W
Sbjct: 341 LECEFGTFDW 350
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 FGTWNW 10
FGT+ W
Sbjct: 3719 FGTYTW 3724
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 FGTWNW 10
FGT+ W
Sbjct: 3719 FGTYTW 3724
>sp|VP2_POVKI|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 350)
Query: 2 RVRFGTWN 9
R+ FG W+
Sbjct: 185 RIAFGIWS 192
>sp|VP2_POVK6|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 60)
Query: 2 RVRFGTWN 9
R+ FG W+
Sbjct: 185 RIAFGIWS 192
>sp|VP2_POVK3|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 380)
Query: 2 RVRFGTWN 9
R+ FG W+
Sbjct: 185 RIAFGIWS 192
>sp|ST_POVJC|SMALL t antigen|JC polyomavirus (JCPyV) (JCV)
Query: 5 FGTWN 9
FGTWN
Sbjct: 74 FGTWN 78
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 RVRFGTW 8
RVR G W
Sbjct: 1745 RVRGGAW 1751
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 RVRFGTW 8
RVR G W
Sbjct: 1775 RVRGGAW 1781
>sp|ST_POVBA|SMALL t antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 5 FGTWN 9
FGTWN
Sbjct: 74 FGTWN 78
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 FGTWN 9
FG+WN
Sbjct: 577 FGSWN 581
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 FGTWN 9
FG+WN
Sbjct: 576 FGSWN 580
>sp|CAP6_ADE12|PRE-PROTEIN VI|Human adenovirus A serotype 12
Query: 2 RVRFGTWN 9
R GTWN
Sbjct: 16 RPYMGTWN 23
>sp|MC160_MCV1|PROTEIN MC160|Molluscum contagiosum virus subtype 1
Query: 1 LRVRFG 6
L+VRFG
Sbjct: 71 LKVRFG 76
>sp|UL28_HCMVA|UNCHARACTERIZED protein UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 FGTWN 9
FG+WN
Sbjct: 255 FGSWN 259
>sp|CAP6_ADE40|PRE-PROTEIN VI|Human adenovirus F serotype 40
Query: 2 RVRFGTWN 9
R GTWN
Sbjct: 16 RPFMGTWN 23
>sp|VIF_HV1V9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 RVRFGTWN 9
R+R TWN
Sbjct: 15 RMRIKTWN 22
7|Sequence|31|40|GTWNWIWRRC
>sp|VE8E2_HPV63|PROTEIN E8^E2C|Human papillomavirus type 63
Query: 2 TWNWIWRRC 10
TW+W+ +C
Sbjct: 157 TWHWVHNKC 165
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 2 TWNWIWRRC 10
TW+W+ +C
Sbjct: 348 TWHWVHNKC 356
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 NWIW 7
NWIW
Sbjct: 732 NWIW 735
>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21
Query: 1 GTWNWIWRRC 10
GTW I R C
Sbjct: 155 GTWKGICRLC 164
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 TWNWIWRRC 10
T+N++W C
Sbjct: 2467 TYNFLWYVC 2475
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 TWNWIWRRC 10
T+N++W C
Sbjct: 2467 TYNFLWYVC 2475
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 1 GTWNWIWRR 9
G + W+W R
Sbjct: 209 GMYYWVWGR 217
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 1 GTWNWIWRR 9
G + W+W R
Sbjct: 209 GMYYWVWGR 217
>sp|VE8E2_HPV08|PROTEIN E8^E2C|Human papillomavirus type 8
Query: 2 TWNWI 6
TW+W+
Sbjct: 257 TWSWV 261
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 1 GTWNWIWRR 9
G + W+W R
Sbjct: 208 GMYYWVWGR 216
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 TWNWI 6
+WNW+
Sbjct: 1203 SWNWL 1207
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GTWNWIWR 8
G W + WR
Sbjct: 305 GAWRYSWR 312
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 5 WIWRRC 10
WI RRC
Sbjct: 411 WIKRRC 416
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 4 NWIWRR 9
+W+W R
Sbjct: 372 DWLWSR 377
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 4 NWIWRR 9
+W+W R
Sbjct: 375 DWLWSR 380
>sp|VE6_HPV48|PROTEIN E6|Human papillomavirus type 48
Query: 1 GTWNWIWRRC 10
GTW + R C
Sbjct: 127 GTWRGVCRNC 136
>sp|VE8E2_HPV05|PROTEIN E8^E2C|Human papillomavirus 5
Query: 2 TWNWI 6
TW+W+
Sbjct: 273 TWSWV 277
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GTWNWIW 7
G WN +W
Sbjct: 3321 GVWNRVW 3327
>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 WNWIWRR 9
W+W +RR
Sbjct: 192 WSWTFRR 198
>sp|VE8E2_HPV65|PROTEIN E8^E2C|Human papillomavirus 65
Query: 3 WNWI 6
WNW+
Sbjct: 164 WNWV 167
>sp|VE2_HPV23|REGULATORY protein E2|Human papillomavirus 23
Query: 2 TWNWI 6
TW+WI
Sbjct: 381 TWSWI 385
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 NWIWRRC 10
N +WR+C
Sbjct: 2231 NLLWRQC 2237
>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38
Query: 2 TWNWI 6
TW+WI
Sbjct: 391 TWSWI 395
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 NWIWRRC 10
N +WR+C
Sbjct: 2231 NLLWRQC 2237
>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49
Query: 2 TWNWI 6
TW+W+
Sbjct: 438 TWSWV 442
>sp|VE8E2_HPV04|PROTEIN E8^E2C|Human papillomavirus 4
Query: 3 WNWI 6
WNW+
Sbjct: 164 WNWV 167
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 2 TWNWI 6
TW+W+
Sbjct: 448 TWSWV 452
>sp|VE2_HPV1|REGULATORY protein E2|Human papillomavirus type 1 (Human
Query: 2 TWNWIWRR 9
TW+W R+
Sbjct: 351 TWHWTDRK 358
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 2 TWNWIWRRC 10
TW+W C
Sbjct: 320 TWHWTSNEC 328
>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5
Query: 2 TWNWI 6
TW+W+
Sbjct: 464 TWSWV 468
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 2 TWNWI 6
TW+W+
Sbjct: 459 TWSWV 463
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 2 TWNWI 6
TW+W+
Sbjct: 444 TWSWV 448
>sp|CAP6_ADE12|PRE-PROTEIN VI|Human adenovirus A serotype 12
Query: 3 WNWIW 7
WN IW
Sbjct: 37 WNSIW 41
>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22
Query: 2 TWNWI 6
TW+W+
Sbjct: 386 TWSWV 390
>sp|VE6_HPV20|PROTEIN E6|Human papillomavirus 20
Query: 1 GTWNWIWRRC 10
G+W I R C
Sbjct: 152 GSWKGICRLC 161
>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WNWIWRR 9
W+W +RR
Sbjct: 192 WSWTFRR 198
>sp|NEF_HV2UC|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 TWNWIWR 8
T+ W+W+
Sbjct: 152 TFGWLWK 158
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 6 IWRRC 10
IW RC
Sbjct: 65 IWLRC 69
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 IWRRC 10
IW RC
Sbjct: 65 IWLRC 69
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 2 TWNWI 6
TW+W+
Sbjct: 404 TWSWV 408
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GTWNWIWRRC 10
GTW+ R C
Sbjct: 374 GTWDPCRRPC 383
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GTWNWIWRRC 10
GTW+ R C
Sbjct: 374 GTWDPCRRPC 383
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GTWNWIWRRC 10
GTW+ R C
Sbjct: 374 GTWDPCRRPC 383
>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b
Query: 2 TWNWI 6
TW+W+
Sbjct: 464 TWSWV 468
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 2 TWNWI 6
TW+W+
Sbjct: 402 TWSWV 406
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 3 WNWI 6
WNW+
Sbjct: 356 WNWV 359
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 TWNWIW 7
T NW+W
Sbjct: 2908 TTNWLW 2913
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 5 WIWRR 9
W+W+R
Sbjct: 2889 WLWKR 2893
Query: 1 GTWNWIWRRC 10
G W ++ +RC
Sbjct: 1481 GAWFFLEKRC 1490
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 TWNWIW 7
T NW+W
Sbjct: 2906 TTNWLW 2911
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TWNWIW 7
T NW+W
Sbjct: 2864 TANWLW 2869
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TWNWIW 7
T NW+W
Sbjct: 2864 TANWLW 2869
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 2 TWNWI 6
TW+W+
Sbjct: 411 TWSWV 415
>sp|VE6_HPV14|PROTEIN E6|Human papillomavirus 14
Query: 1 GTWNWIWRRC 10
G+W I R C
Sbjct: 158 GSWKGICRLC 167
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TWNWIW 7
T NW+W
Sbjct: 2864 TANWLW 2869
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TWNWIW 7
T NW+W
Sbjct: 2864 TANWLW 2869
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TWNWIW 7
T NW+W
Sbjct: 2864 TANWLW 2869
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 TWNWIW 7
T NW+W
Sbjct: 2906 TTNWLW 2911
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 3 WNWI 6
WNW+
Sbjct: 356 WNWV 359
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 TWNWIW 7
T NW+W
Sbjct: 2906 TTNWLW 2911
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 TWNWIW 7
T NW+W
Sbjct: 2906 TTNWLW 2911
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 TWNWIW 7
T NW+W
Sbjct: 2904 TTNWLW 2909
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 TWNWIW 7
T NW+W
Sbjct: 2908 TTNWLW 2913
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 TWNWIWRR 9
TW W R
Sbjct: 126 TWQHTWPR 133
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 TWNWIW 7
T NW+W
Sbjct: 2907 TTNWLW 2912
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 WNWI 6
WNW+
Sbjct: 1986 WNWV 1989
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 4 NWIWRR 9
N++W+R
Sbjct: 221 NYVWKR 226
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 WNWIW 7
WN +W
Sbjct: 1525 WNTVW 1529
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 TWNWIW 7
T NW+W
Sbjct: 2907 TTNWLW 2912
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 WNWIW 7
WN +W
Sbjct: 1525 WNTVW 1529
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 WNWIW 7
WN +W
Sbjct: 1525 WNTVW 1529
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 WNWIW 7
WN +W
Sbjct: 1525 WNTVW 1529
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 WNWIW 7
WN +W
Sbjct: 1523 WNTVW 1527
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 5 WIWRR 9
W+W R
Sbjct: 606 WVWDR 610
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 3 WNWIW 7
WN +W
Sbjct: 1539 WNTVW 1543
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 WNWIW 7
WN +W
Sbjct: 1525 WNTVW 1529
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TWNWIWR 8
T W+WR
Sbjct: 2866 TAEWLWR 2872
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TWNWIWR 8
T W+WR
Sbjct: 2866 TAEWLWR 2872
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TWNWIWR 8
T W+WR
Sbjct: 2866 TAEWLWR 2872
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 3 WNWIW 7
WN +W
Sbjct: 728 WNSLW 732
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TWNWIWR 8
T W+WR
Sbjct: 2866 TAEWLWR 2872
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TWNWIWR 8
T W+WR
Sbjct: 2866 TAEWLWR 2872
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 2 TWNWIWRRC 10
TW+W +C
Sbjct: 340 TWHWAGGKC 348
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 WNWIW 7
WN +W
Sbjct: 1540 WNTVW 1544
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 WNWIW 7
WN +W
Sbjct: 1540 WNTVW 1544
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 2 TWNWI 6
TW WI
Sbjct: 424 TWGWI 428
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 5 WIWRR 9
WIW R
Sbjct: 438 WIWFR 442
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 TWNWIW 7
+W+W++
Sbjct: 1212 SWSWLF 1217
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 WNWIWRR 9
WN +W R
Sbjct: 3341 WNRVWIR 3347
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 TWNWIW 7
+W+W++
Sbjct: 1212 SWSWLF 1217
>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25
Query: 1 GTWNWIWRRC 10
G+W I R C
Sbjct: 145 GSWKGICRLC 154
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 2 TWNWI 6
TW+W+
Sbjct: 332 TWSWV 336
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 5 WIWRR 9
WIW R
Sbjct: 457 WIWFR 461
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 GTWNWI 6
G W W+
Sbjct: 2 GIWKWL 7
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GTWNWIWR 8
G W W+W
Sbjct: 828 GAWGWLWE 835
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 GTWNWI 6
G W W+
Sbjct: 2 GIWKWL 7
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 GTWNWI 6
G W W+
Sbjct: 2 GIWKWL 7
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 2 TWNWI 6
TW+WI
Sbjct: 313 TWHWI 317
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 2 TWNWI 6
TW+WI
Sbjct: 323 TWHWI 327
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 WNWIWR 8
WN WR
Sbjct: 420 WNCGWR 425
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 5 WIWR 8
WIW+
Sbjct: 604 WIWK 607
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 6 IWRRC 10
+W+RC
Sbjct: 454 VWQRC 458
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 TWNWIWRRC 10
TW + RC
Sbjct: 3389 TWRFAKERC 3397
8|Sequence|36|45|IWRRCCRAAS
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 WRRCCR 7
W+R CR
Sbjct: 231 WKRACR 236
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 IWRRCCR 7
++RRC R
Sbjct: 515 VYRRCAR 521
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 WRRCCR 7
WR CR
Sbjct: 2630 WRHMCR 2635
>sp|A52_VACCC|PROTEIN A52|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 WRRCCRA 8
W+ C RA
Sbjct: 157 WKYCLRA 163
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 RRCCRAA 9
++CC AA
Sbjct: 2152 KQCCTAA 2158
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 RRCCRAA 9
++CC AA
Sbjct: 2152 KQCCTAA 2158
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 WRRCC 6
WRR C
Sbjct: 1630 WRRRC 1634
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 WRRCC 6
WRR C
Sbjct: 1629 WRRRC 1633
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 WRRCC 6
WRR C
Sbjct: 1629 WRRRC 1633
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 RCCRAA 9
RCC AA
Sbjct: 554 RCCDAA 559
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 WRRCCRAAS 10
W RC R S
Sbjct: 808 WGRCLRTHS 816
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 WRRCCR 7
W+ CR
Sbjct: 2542 WKHACR 2547
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 1 IWRRC 5
+W+RC
Sbjct: 454 VWQRC 458
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IWRRCCRAAS 10
+W CR A+
Sbjct: 244 VWTGTCRLAN 253
9|Sequence|41|50|CRAASAAVLA
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RAASAAVL 9
RAA AAVL
Sbjct: 575 RAARAAVL 582
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RAASAAVL 9
RAA AAVL
Sbjct: 575 RAARAAVL 582
>sp|VE7_HPV30|PROTEIN E7|Human papillomavirus 30
Query: 1 CRAASAAVLA 10
CR ASA LA
Sbjct: 66 CRCASAVQLA 75
10|Sequence|46|55|AAVLAPLGFT
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 4 LAPLGFT 10
+APLGF+
Sbjct: 211 IAPLGFS 217
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 VLAPLGFT 10
+ APLG T
Sbjct: 1834 IQAPLGLT 1841
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 VLAPLGF 9
V AP+GF
Sbjct: 1644 VTAPIGF 1650
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 VLAPLGF 9
V AP+GF
Sbjct: 1643 VTAPIGF 1649
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 3 VLAPLGF 9
+L PLGF
Sbjct: 811 LLGPLGF 817
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 3 VLAPLGF 9
+L PLGF
Sbjct: 811 LLGPLGF 817
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 VLAPLGF 9
+L PLGF
Sbjct: 811 LLGPLGF 817
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 VLAPLGF 9
V AP+GF
Sbjct: 1641 VTAPIGF 1647
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 VLAPLGF 9
+L PLGF
Sbjct: 811 LLGPLGF 817
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 3 VLAPLGF 9
+L PLGF
Sbjct: 811 LLGPLGF 817
11|Sequence|51|60|PLGFTLRKPP
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 PLGFTLR 7
P+GFTLR
Sbjct: 4337 PVGFTLR 4343
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PLGFTLR 7
P+GFTLR
Sbjct: 4337 PVGFTLR 4343
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 PLGFTLR 7
P+GFTL+
Sbjct: 4360 PVGFTLK 4366
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PLGFTLR 7
P+GFTL+
Sbjct: 4360 PVGFTLK 4366
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 1 PLGFTLRK 8
PLGF+L++
Sbjct: 213 PLGFSLQQ 220
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 1 PLGFTLRK 8
PLGF+L++
Sbjct: 213 PLGFSLQQ 220
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 GFTLRKP 9
GFT KP
Sbjct: 149 GFTFHKP 155
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 GFTLRKP 9
GFT KP
Sbjct: 149 GFTFHKP 155
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 3 GFTLRKP 9
GFT KP
Sbjct: 149 GFTFHKP 155
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 3 GFTLRKP 9
GFT KP
Sbjct: 149 GFTFHKP 155
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 GFTLRKP 9
GFT KP
Sbjct: 149 GFTFHKP 155
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 3 GFTLRKP 9
GFT KP
Sbjct: 149 GFTFHKP 155
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 GFTLRKP 9
GFT KP
Sbjct: 149 GFTFHKP 155
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 GFTLRKP 9
GFT KP
Sbjct: 149 GFTFHKP 155
>sp|E434_ADE02|EARLY 4 ORF6 protein|Human adenovirus C serotype 2
Query: 1 PLGFTLR 7
P G TLR
Sbjct: 7 PFGMTLR 13
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LGFTLRK 8
LGF LRK
Sbjct: 1214 LGFFLRK 1220
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LGFTLRK 8
LGF LRK
Sbjct: 1214 LGFFLRK 1220
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LGFTLRK 8
LGF LRK
Sbjct: 1214 LGFFLRK 1220
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LGFTLRK 8
LGF LRK
Sbjct: 1214 LGFFLRK 1220
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LGFTLRK 8
LGF LRK
Sbjct: 1214 LGFFLRK 1220
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 PLGFTLRKPP 10
P+G +R PP
Sbjct: 101 PIGIWVRGPP 110
>sp|TAT_HV1S2|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 PLGFTLRKP 9
PL T RKP
Sbjct: 73 PLSQTQRKP 81
12|Sequence|56|65|LRKPPAVGRN
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 PPAVGRN 10
PPA G+N
Sbjct: 149 PPAAGKN 155
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 RKPPAVGRN 10
+KPP V R+
Sbjct: 1833 KKPPGVARS 1841
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PPAVGR 9
PP VGR
Sbjct: 1485 PPPVGR 1490
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 KPPAVGR 9
+PP +GR
Sbjct: 457 EPPVIGR 463
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 PPAVGR 9
PP +GR
Sbjct: 458 PPVIGR 463
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 4 PPAVGRN 10
PP VG N
Sbjct: 508 PPLVGSN 514
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 4 PPAVGRN 10
PPA+G N
Sbjct: 991 PPALGAN 997
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 4 PPAVGRN 10
PPA+G N
Sbjct: 991 PPALGAN 997
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 KPPAVGR 9
+PP +GR
Sbjct: 456 EPPLIGR 462
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 PPAVGR 9
PP +GR
Sbjct: 458 PPVIGR 463
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 KPPAVGR 9
+PP +GR
Sbjct: 456 EPPLIGR 462
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 RKPPAVGRN 10
+KP GRN
Sbjct: 3 KKPGGPGRN 11
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 KPPAVGR 9
+PP +GR
Sbjct: 456 EPPLIGR 462
13|Sequence|61|70|AVGRNRRHHR
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 4 RNRRHHR 10
RNR HR
Sbjct: 327 RNRSRHR 333
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 4 RNRRHHR 10
RNR HR
Sbjct: 327 RNRSRHR 333
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 VGRNRRHH 9
+ RN+ HH
Sbjct: 633 IQRNKSHH 640
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 VGRNRRHH 9
+ RN+ HH
Sbjct: 633 IQRNKSHH 640
>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)
Query: 1 AVGRNRRHHR 10
+V +RRH R
Sbjct: 103 SVASSRRHKR 112
>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)
Query: 1 AVGRNRRHHR 10
+V +RRH R
Sbjct: 103 SVASSRRHKR 112
>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)
Query: 1 AVGRNRRHHR 10
+V +RRH R
Sbjct: 103 SVASSRRHKR 112
>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 AVGRNRRHHR 10
+V +RRH R
Sbjct: 106 SVASSRRHKR 115
>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)
Query: 1 AVGRNRRHHR 10
+V +RRH R
Sbjct: 103 SVASSRRHKR 112
>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)
Query: 1 AVGRNRRHHR 10
+V +RRH R
Sbjct: 103 SVASSRRHKR 112
>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)
Query: 1 AVGRNRRHHR 10
+V +RRH R
Sbjct: 103 SVASSRRHKR 112
>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 AVGRNRRHHR 10
+V +RRH R
Sbjct: 103 SVASSRRHKR 112
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 AVGRNRRHHR 10
+V +RRH R
Sbjct: 103 SVASSRRHKR 112
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 VGRNRRHHR 10
+GR R H R
Sbjct: 461 IGRERFHSR 469
>sp|VP6_ROTGI|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Rat/United
Query: 3 GRNRRHH 9
GRNR H
Sbjct: 234 GRNREGH 240
>sp|TAT_HV1SE|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 3 GRNRRHHR 10
GR +R HR
Sbjct: 48 GRKKRKHR 55
>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin)
Query: 2 VGRNRRH 8
VG++R+H
Sbjct: 28 VGKSRKH 34
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169)
Query: 2 VGRNRRH 8
VG++R+H
Sbjct: 28 VGKSRKH 34
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 3 GRNRRHH 9
GR + HH
Sbjct: 1373 GREKSHH 1379
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 VGRNRRHH 9
+GR RR H
Sbjct: 448 IGRVRRPH 455
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 3 GRNRRHH 9
GR + HH
Sbjct: 1373 GREKSHH 1379
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 2 VGRNRRHH 9
+GR RR H
Sbjct: 448 IGRVRRPH 455
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 3 GRNRRHH 9
GR + HH
Sbjct: 1373 GREKSHH 1379
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 AVGRNRRH 8
A RN+RH
Sbjct: 420 AFKRNKRH 427
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 AVGRNRRHHR 10
+ G+N RH R
Sbjct: 634 SAGQNPRHIR 643
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 GRNRRHHR 10
G N HH+
Sbjct: 460 GNNNTHHQ 467
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 3 GRNRRHHR 10
G N HH+
Sbjct: 460 GNNNTHHQ 467
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 GRNRRHHR 10
G N HH+
Sbjct: 460 GNNNTHHQ 467
14|Sequence|66|75|RRHHRHPRGG
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 HHRHPRG 9
HHR PRG
Sbjct: 1559 HHRRPRG 1565
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 HHRHPRG 9
HHR P G
Sbjct: 1559 HHRRPHG 1565
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 HRHPRGG 10
HRHP G
Sbjct: 122 HRHPSNG 128
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 HRHPRGG 10
HRHP G
Sbjct: 122 HRHPSNG 128
>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P
Query: 2 RHHRHP 7
RH RHP
Sbjct: 231 RHDRHP 236
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HHRHPRGG 10
HH PRG
Sbjct: 153 HHTFPRGA 160
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 RRHHRHP 7
+R H+HP
Sbjct: 287 KRSHKHP 293
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RRHHRHP 7
+R H+HP
Sbjct: 287 KRSHKHP 293
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RRHHRHP 7
+R H+HP
Sbjct: 287 KRSHKHP 293
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 RRHHRHP 7
+R H+HP
Sbjct: 287 KRSHKHP 293
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 4 HRHPRGG 10
HRH +GG
Sbjct: 461 HRHIKGG 467
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 HHRHPRG 9
H RH RG
Sbjct: 497 HQRHTRG 503
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 4 HRHPRGG 10
HRH +GG
Sbjct: 461 HRHIKGG 467
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 5 RHPRG 9
RHPRG
Sbjct: 610 RHPRG 614
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 3 HHRHP 7
+HRHP
Sbjct: 688 YHRHP 692
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 3 HHRHP 7
+HRHP
Sbjct: 688 YHRHP 692
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 HHRHPRG 9
H RH RG
Sbjct: 506 HGRHTRG 512
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 3 HHRHP 7
HH HP
Sbjct: 2 HHLHP 6
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 3 HHRHP 7
HH HP
Sbjct: 2 HHLHP 6
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 3 HHRHP 7
HH HP
Sbjct: 2 HHLHP 6
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 1 RRHHRHPRGG 10
R H PRGG
Sbjct: 231 RHHSYRPRGG 240
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 3 HHRHP 7
+HRHP
Sbjct: 679 YHRHP 683
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 1 RRHHRH 6
++HHRH
Sbjct: 758 KQHHRH 763
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 RHHRH-PRGG 10
RHH H PRGG
Sbjct: 131 RHHSHRPRGG 140
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 1 RRHHRH 6
++HHRH
Sbjct: 758 KQHHRH 763
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 RRHHRH 6
+RH RH
Sbjct: 498 QRHQRH 503
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RRHHRHPRGG 10
R H PRGG
Sbjct: 231 RHHPYRPRGG 240
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 1 RRHHRHPRGG 10
RH+R P G
Sbjct: 636 ERHNREPEGS 645
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RHHRHPR 8
RH R PR
Sbjct: 247 RHAREPR 253
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 3 HHRHP 7
+HRHP
Sbjct: 688 YHRHP 692
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HHRHP 7
HHRHP
Sbjct: 318 HHRHP 322
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HHRHP 7
HHRHP
Sbjct: 319 HHRHP 323
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HHRHP 7
HH+HP
Sbjct: 185 HHKHP 189
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 4 HRHPRG 9
HR PRG
Sbjct: 81 HRPPRG 86
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 RRHHRHPRG 9
++H R PRG
Sbjct: 7 KKHSRPPRG 15
>sp|VPAP_HHV7J|DNA polymerase processivity factor|Human herpesvirus 7 (strain JI)
Query: 1 RRHHRH 6
R HH H
Sbjct: 6 REHHSH 11
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 4 HRHPRG 9
HR PRG
Sbjct: 81 HRPPRG 86
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 2 RHHRHPRGG 10
RH PR G
Sbjct: 301 RHRSLPRSG 309
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RRHHRHPRG 9
R HR P G
Sbjct: 994 REWHRSPMG 1002
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RRHHRHPRG 9
R HR P G
Sbjct: 994 REWHRSPMG 1002
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RRHHRHPRG 9
R HR P G
Sbjct: 994 REWHRSPMG 1002
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 RHHRHPR 8
R HR PR
Sbjct: 836 RGHRDPR 842
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 1 RRHHRHPR 8
RRH R+P+
Sbjct: 460 RRHLRNPK 467
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 RRHHRH 6
R+H RH
Sbjct: 2021 RKHFRH 2026
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 RRHHRH 6
R+H RH
Sbjct: 2021 RKHFRH 2026
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 RRHHRH 6
R+H RH
Sbjct: 2021 RKHFRH 2026
15|Sequence|71|80|HPRGGSCLAA
>sp|VE4_HPV58|PROTEIN E4|Human papillomavirus 58
Query: 1 HPRGGSCL 8
H +GG+C+
Sbjct: 72 HTKGGTCV 79
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 RGGSC 7
RGGSC
Sbjct: 104 RGGSC 108
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 HPRGGS 6
PRGGS
Sbjct: 415 QPRGGS 420
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 RGGSCLA 9
+GG+C+A
Sbjct: 1246 KGGTCIA 1252
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 RGGSCLA 9
+GG+C+A
Sbjct: 1246 KGGTCVA 1252
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 RGGSCLA 9
+GG+C+A
Sbjct: 1246 KGGTCVA 1252
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 HPRGGSCLAA 10
HP G LAA
Sbjct: 828 HPSGPKALAA 837
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 GGSCL 8
GGSCL
Sbjct: 1078 GGSCL 1082
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 GGSCL 8
GGSCL
Sbjct: 1078 GGSCL 1082
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 3 RGGSCLAA 10
RGG C AA
Sbjct: 138 RGGQCRAA 145
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 HPRGGSCLAA 10
+PR C+AA
Sbjct: 1487 NPRSARCVAA 1496
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 HPRGGSCLAA 10
+PR C+AA
Sbjct: 1490 NPRSARCVAA 1499
>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)
Query: 2 PRGGSCLAA 10
P G CL A
Sbjct: 116 PDGSECLPA 124
>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)
Query: 2 PRGGSCLAA 10
P G CL A
Sbjct: 116 PDGSECLPA 124
>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 PRGGSCLAA 10
P G CL A
Sbjct: 116 PDGSECLPA 124
>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 PRGGSCLAA 10
P G CL A
Sbjct: 116 PDGSECLPA 124
>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 PRGGSCLAA 10
P G CL A
Sbjct: 116 PDGSECLPA 124
>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 2 PRGGSCLAA 10
P G CL A
Sbjct: 116 PDGSECLPA 124
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 PRGGSCLAA 10
P G CL A
Sbjct: 116 PDGSECLPA 124
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 2 PRGGSCLAA 10
P G CL A
Sbjct: 116 PDGSECLPA 124
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 PRGGSCLAA 10
P G CL A
Sbjct: 116 PDGSECLPA 124
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 PRGGSCLAA 10
P G CL A
Sbjct: 116 PDGSECLPA 124
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 HPRGGSCLAA 10
HP S LAA
Sbjct: 812 HPESPSVLAA 821
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 4 GGSCLA 9
GG+C+A
Sbjct: 1247 GGTCVA 1252
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 HPRGGSCLA 9
HP CL+
Sbjct: 399 HPNAPQCLS 407
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 1 HPRGGSCLA 9
HP CL+
Sbjct: 399 HPNAPQCLS 407
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 4 GGSCLA 9
GGSC A
Sbjct: 457 GGSCKA 462
16|Sequence|76|85|SCLAAAHHRM
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 CLAAAHHR 9
CLAA HR
Sbjct: 4628 CLAAETHR 4635
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 4 AAAHHR 9
A AHHR
Sbjct: 1675 AMAHHR 1680
>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)
Query: 3 LAAAHHRM 10
LAA H RM
Sbjct: 208 LAAMHARM 215
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 CLAAAHH 8
CL +HH
Sbjct: 2631 CLKLSHH 2637
>sp|NEC2_HHV2H|NUCLEAR egress protein 2|Human herpesvirus 2 (strain HG52)
Query: 3 LAAAHH 8
+AAAHH
Sbjct: 207 VAAAHH 212
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CLAAAHH 8
CL +HH
Sbjct: 2631 CLKLSHH 2637
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 2 CLAAAHH 8
CLA A H
Sbjct: 522 CLARAQH 528
17|Sequence|81|90|AHHRMRWRAD
>sp|PG142_VACCC|CORE protein OPG142|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 HRMRWRAD 10
HR++W D
Sbjct: 67 HRIKWMGD 74
>sp|PG142_VACCA|CORE protein OPG142|Vaccinia virus (strain Ankara) (VACV)
Query: 3 HRMRWRAD 10
HR++W D
Sbjct: 67 HRIKWMGD 74
>sp|PG142_MONPV|CORE protein OPG142|Monkeypox virus (MPXV)
Query: 3 HRMRWRAD 10
HR++W D
Sbjct: 67 HRIKWMGD 74
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 HHRMRWR 8
HHR R+R
Sbjct: 669 HHRERYR 675
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 AHHRMRWRAD 10
AH R+RW A+
Sbjct: 514 AHGRVRWVAE 523
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 AHHRMRWRAD 10
AH R+RW A+
Sbjct: 514 AHGRVRWVAE 523
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 AHHRMRWRAD 10
A HR+R AD
Sbjct: 327 ARHRLRRGAD 336
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 1 AHHRMRWRAD 10
A HR+R AD
Sbjct: 195 ARHRLRRGAD 204
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 AHHRMRWRAD 10
A HR+R AD
Sbjct: 327 ARHRLRRGAD 336
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 AHHRMRWRAD 10
A HR+R AD
Sbjct: 327 ARHRLRRGAD 336
>sp|VL3_HPV5B|PROBABLE protein L3|Human papillomavirus type 5b
Query: 2 HHRMRW 7
HHR RW
Sbjct: 81 HHRHRW 86
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 AHHRMRWRAD 10
A HR+R AD
Sbjct: 327 ARHRLRRGAD 336
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 AHHRMRWRAD 10
A HR+R AD
Sbjct: 327 ARHRLRRGAD 336
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 AHHRMRWRAD 10
A HR+R AD
Sbjct: 327 ARHRLRRGAD 336
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 AHHRMRWRAD 10
A HR+R AD
Sbjct: 327 ARHRLRRGAD 336
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 2 HHRMRWRAD 10
H R WR D
Sbjct: 45 HPRCTWRLD 53
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 2 HHRMRWR 8
H R+ WR
Sbjct: 97 HERLVWR 103
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 HRMRWRA 9
HR RW A
Sbjct: 21 HRNRWFA 27
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 HRMRWRA 9
HR RW A
Sbjct: 21 HRNRWFA 27
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 HRMRWRA 9
HR RW A
Sbjct: 21 HRNRWFA 27
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 2 HHRMRWRAD 10
H R WR D
Sbjct: 43 HPRCTWRLD 51
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|PG142_VARV|CORE protein OPG142|Variola virus
Query: 3 HRMRWRAD 10
HR++W +
Sbjct: 67 HRIKWMGN 74
>sp|PG142_VAR67|CORE protein OPG142|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 HRMRWRAD 10
HR++W +
Sbjct: 67 HRIKWMGN 74
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 HRMRW 7
HRM W
Sbjct: 317 HRMAW 321
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 3 HRMRW 7
HRM W
Sbjct: 188 HRMAW 192
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 RWRAD 10
RWRA+
Sbjct: 38 RWRAE 42
>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 RWRAD 10
RWRA+
Sbjct: 38 RWRAE 42
>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 RWRAD 10
RWRA+
Sbjct: 38 RWRAE 42
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 3 HRMRW 7
HRM W
Sbjct: 200 HRMAW 204
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 3 HRMRW 7
HRM W
Sbjct: 200 HRMAW 204
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 2 HHRMRWRAD 10
HH W AD
Sbjct: 113 HHESVWWAD 121
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 HHRMRWR 8
HH + W+
Sbjct: 136 HHLLPWK 142
>sp|UL147_HCMVT|PUTATIVE viral CXC chemokine 2|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 HHRMRW 7
H R+RW
Sbjct: 154 HFRLRW 159
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 3 HRMRW 7
HR RW
Sbjct: 137 HRNRW 141
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 3 HRMRW 7
HRM W
Sbjct: 316 HRMAW 320
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 6 RWRAD 10
RWRA+
Sbjct: 66 RWRAE 70
>sp|POLG_HCVE0|GENOME polyprotein|Hepatitis C virus (isolate EC10)
Query: 3 HRMRW 7
HRM W
Sbjct: 17 HRMAW 21
18|Sequence|86|95|RWRADGRSLE
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 1 RWRADGRS 8
RWRA+GR+
Sbjct: 66 RWRAEGRA 73
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 4 ADGRSLE 10
ADG+SLE
Sbjct: 329 ADGKSLE 335
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 1 RWRADGRSLE 10
RWR +GR +
Sbjct: 64 RWRPEGRPVN 73
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 WRADGRSLE 10
WR DG S +
Sbjct: 281 WRWDGESTD 289
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 WRADGRSLE 10
WR DG S +
Sbjct: 281 WRWDGESTD 289
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 RWRADGRSL 9
RW A G+S+
Sbjct: 583 RWDALGKSI 591
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WRADGRSLE 10
W+ D R +E
Sbjct: 1075 WQMDSRMME 1083
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WRADGRSLE 10
W+ D R +E
Sbjct: 1075 WQMDSRMME 1083
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WRADGRSLE 10
W+ D R +E
Sbjct: 1075 WQMDSRMME 1083
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WRADGRSLE 10
W+ D R +E
Sbjct: 1075 WQMDSRMME 1083
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WRADGRSLE 10
W+ D R +E
Sbjct: 1075 WQMDSRMME 1083
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WRADGRSLE 10
W+ D R +E
Sbjct: 1069 WQMDSRMME 1077
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WRADGRSLE 10
W+ D R +E
Sbjct: 1075 WQMDSRMME 1083
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WRADGRSLE 10
W+ D R +E
Sbjct: 1075 WQMDSRMME 1083
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WRADGRSLE 10
W+ D R +E
Sbjct: 1075 WQMDSRMME 1083
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WRADGRSLE 10
W+ D R +E
Sbjct: 1075 WQMDSRMME 1083
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 RWRADGRSLE 10
RW D R+ +
Sbjct: 2134 RWTKDARNTQ 2143
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 RWRADGRSLE 10
RW D R+ +
Sbjct: 2134 RWTKDARNTQ 2143
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 RWRADGRSLE 10
RW D R+ +
Sbjct: 2134 RWTKDARNTQ 2143
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 RWRADGRSLE 10
RW D R+ +
Sbjct: 2134 RWTKDARNTQ 2143
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 RWRADGRSLE 10
RW D R+ +
Sbjct: 2134 RWTKDARNTQ 2143
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 RWRADGRSLE 10
R++AD +S+E
Sbjct: 2353 RFKADTQSIE 2362
Query: 2 WRADG 6
WR DG
Sbjct: 2020 WRGDG 2024
>sp|U18_HHV6U|PUTATIVE immediate early glycoprotein|Human herpesvirus 6A (strain
Query: 1 RWRADGR 7
RW +DG+
Sbjct: 159 RWISDGQ 165
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 WRADG 6
WR DG
Sbjct: 2020 WRGDG 2024
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 WRADG 6
WR DG
Sbjct: 2019 WRGDG 2023
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRADG 6
WR DG
Sbjct: 2019 WRGDG 2023
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 WRADGRS 8
WR GR+
Sbjct: 263 WRQQGRA 269
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 WRADGRS 8
WR GR+
Sbjct: 263 WRQQGRA 269
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRADG 6
WR DG
Sbjct: 2019 WRGDG 2023
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 WRADG 6
WR DG
Sbjct: 2021 WRGDG 2025
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRADG 6
WR DG
Sbjct: 2019 WRGDG 2023
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 WRADG 6
WR DG
Sbjct: 2023 WRGDG 2027
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRADG 6
WR DG
Sbjct: 2019 WRGDG 2023
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRADG 6
WR DG
Sbjct: 2019 WRGDG 2023
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRADG 6
WR DG
Sbjct: 2019 WRGDG 2023
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 WRADG 6
WR DG
Sbjct: 2027 WRGDG 2031
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 WRADG 6
WR DG
Sbjct: 2020 WRGDG 2024
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 WRADG 6
WR DG
Sbjct: 2017 WRGDG 2021
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRADG 6
WR DG
Sbjct: 2019 WRGDG 2023
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 WRADG 6
WR DG
Sbjct: 2025 WRGDG 2029
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 WRADG 6
WR DG
Sbjct: 2024 WRGDG 2028
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRADG 6
WR DG
Sbjct: 2019 WRGDG 2023
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 WRADG 6
WR DG
Sbjct: 2025 WRGDG 2029
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 WRADG 6
WR DG
Sbjct: 2019 WRGDG 2023
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 WRADG 6
WR DG
Sbjct: 2019 WRVDG 2023
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 272 WCASGRS 278
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 289 WCASGRS 295
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 287 WCASGRS 293
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 289 WCASGRS 295
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 282 WCASGRS 288
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 280 WCASGRS 286
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 287 WCASGRS 293
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 287 WCASGRS 293
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 284 WCASGRS 290
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 287 WCASGRS 293
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 2 WRADGRS 8
W A GRS
Sbjct: 287 WCASGRS 293
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 287 WCASGRS 293
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 289 WCASGRS 295
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 287 WCASGRS 293
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 2 WRADGRS 8
W A GRS
Sbjct: 287 WCASGRS 293
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 274 WCASGRS 280
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 282 WCASGRS 288
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 278 WCASGRS 284
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 288 WCASGRS 294
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 289 WCASGRS 295
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 285 WCASGRS 291
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 WRADGRS 8
W A GRS
Sbjct: 287 WCASGRS 293
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 WRADGRS 8
W A GRS
Sbjct: 287 WCASGRS 293
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 282 WCASGRS 288
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 287 WCASGRS 293
>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 272 WCASGRS 278
>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 274 WCASGRS 280
>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 274 WCASGRS 280
>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 274 WCASGRS 280
>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 274 WCASGRS 280
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 274 WCASGRS 280
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 274 WCASGRS 280
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 274 WCASGRS 280
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 274 WCASGRS 280
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 274 WCASGRS 280
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 287 WCASGRS 293
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 279 WCASGRS 285
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 287 WCASGRS 293
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 2 WRADGRS 8
W A GRS
Sbjct: 289 WCASGRS 295
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 2 WRADGRS 8
W A GRS
Sbjct: 281 WCASGRS 287
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 WRADGRSLE 10
+ DGRSL+
Sbjct: 521 YIVDGRSLQ 529
19|Sequence|91|100|GRSLEKLPVH
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 2 RSLEKLPVH 10
RS+E+ P H
Sbjct: 156 RSIERTPGH 164
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 1 GRSLEKLPVH 10
G LE +P+H
Sbjct: 349 GAILENIPLH 358
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GRSLEKLPVH 10
G LE +P+H
Sbjct: 349 GAILENIPLH 358
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 1 GRSLEKLPVH 10
G LE +P+H
Sbjct: 349 GAILENIPLH 358
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 4 LEKLPVH 10
L+KLP H
Sbjct: 1200 LQKLPPH 1206
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 4 LEKLPVH 10
L+KLP H
Sbjct: 1200 LQKLPPH 1206
20|Sequence|96|105|KLPVHMGLVI
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 LPVHMGL 8
+PVH GL
Sbjct: 337 IPVHQGL 343
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 VHMGLVI 10
VH GLVI
Sbjct: 1297 VHQGLVI 1303
>sp|VU51_HHV6Z|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6B (strain Z29)
Query: 2 LPVHMGLV 9
LP+ MGL+
Sbjct: 62 LPIKMGLL 69
>sp|VU51_HHV7J|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 7 (strain JI)
Query: 2 LPVHMGLV 9
LPV MG++
Sbjct: 61 LPVKMGML 68
>sp|VU51_HHV6U|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6A (strain
Query: 2 LPVHMGLV 9
LP+ MGL+
Sbjct: 62 LPIKMGLL 69
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 KLPVHM 6
++PVHM
Sbjct: 172 QIPVHM 177
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 KLPVHM 6
++PVHM
Sbjct: 173 QIPVHM 178
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 KLPVHM 6
++PVHM
Sbjct: 175 QIPVHM 180
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 KLPVHM 6
++PVHM
Sbjct: 175 QIPVHM 180
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 KLPVHM 6
++PVHM
Sbjct: 165 QIPVHM 170
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 KLPVHM 6
++PVHM
Sbjct: 165 QIPVHM 170
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 KLPVHM 6
++PVHM
Sbjct: 165 QIPVHM 170
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 KLPVHM 6
++PVHM
Sbjct: 173 QIPVHM 178
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 KLPVHM 6
++PVHM
Sbjct: 172 QIPVHM 177
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 KLPVHM 6
++PVHM
Sbjct: 166 QIPVHM 171
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 KLPVHM 6
++PVHM
Sbjct: 166 QIPVHM 171
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 KLPVHM 6
++PVHM
Sbjct: 166 QIPVHM 171
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 KLPVHM 6
++PVHM
Sbjct: 166 QIPVHM 171
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 KLPVHMG 7
+LP H+G
Sbjct: 2133 RLPEHLG 2139
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KLPVH 5
KLPVH
Sbjct: 610 KLPVH 614
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KLPVH 5
KLPVH
Sbjct: 610 KLPVH 614
21|Sequence|101|110|MGLVITEVEQ
***** No hits found ******
22|Sequence|106|115|TEVEQEPSFS
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 1 TEVEQEPSF 9
TE++Q P+F
Sbjct: 486 TEIKQRPAF 494
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 1 TEVEQEPSF 9
TE++Q P+F
Sbjct: 486 TEIKQRPTF 494
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 TEVEQEPSFS 10
T++E+EPS +
Sbjct: 1968 TDIEKEPSLA 1977
>sp|VE7_HPV38|PROTEIN E7|Human papillomavirus 38
Query: 3 VEQEPSFS 10
VE+EP+++
Sbjct: 40 VEEEPAYT 47
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 3 VEQEPSF 9
+EQ+P F
Sbjct: 45 IEQDPGF 51
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 3 VEQEPSF 9
+EQ+P F
Sbjct: 45 IEQDPGF 51
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 2 EVEQEPSF 9
EV+ EP+F
Sbjct: 413 EVDPEPTF 420
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 TEVEQEPSF 9
TEV+ PSF
Sbjct: 293 TEVDLIPSF 301
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 QEPSFS 10
Q+PSFS
Sbjct: 325 QQPSFS 330
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 QEPSFS 10
Q+PSFS
Sbjct: 325 QQPSFS 330
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 2 EVEQEPSF 9
+VEQ+P +
Sbjct: 35 QVEQDPGY 42
23|Sequence|111|120|EPSFSDIASL
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EPSFSDIA 8
EPS SDIA
Sbjct: 229 EPSGSDIA 236
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 EPSFSDIA 8
EPS SDIA
Sbjct: 229 EPSGSDIA 236
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 2 PSFSDIASL 10
P+F+DIA L
Sbjct: 308 PAFADIAYL 316
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EPSFSDIA 8
EP+ SDIA
Sbjct: 228 EPTGSDIA 235
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EPSFSDIA 8
EP+ SDIA
Sbjct: 228 EPTGSDIA 235
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 EPSFSDIA 8
EP+ SDIA
Sbjct: 228 EPTGSDIA 235
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 EPSFSDIA 8
EP+ SDIA
Sbjct: 228 EPTGSDIA 235
>sp|ORF23_TTVV2|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 2 PSFSDIASL 10
P SD+ASL
Sbjct: 156 PGTSDVASL 164
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 EPSFSDIAS 9
+PSF D AS
Sbjct: 648 QPSFGDDAS 656
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 1 EPSFSDIAS 9
+PSF D AS
Sbjct: 670 QPSFGDDAS 678
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 EPSFSDIAS 9
+PSF D AS
Sbjct: 643 QPSFGDDAS 651
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 2 PSFSDIASL 10
P F+DI+++
Sbjct: 197 PEFADISTV 205
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 PSFSDIAS 9
PSFSD S
Sbjct: 1209 PSFSDNTS 1216
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 PSFSD 6
PSFSD
Sbjct: 1213 PSFSD 1217
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 PSFSD 6
PSFSD
Sbjct: 1214 PSFSD 1218
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 PSFSD 6
PSFSD
Sbjct: 1210 PSFSD 1214
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 PSFSD 6
PSFSD
Sbjct: 1216 PSFSD 1220
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 PSFSD 6
PSFSD
Sbjct: 1214 PSFSD 1218
24|Sequence|116|125|DIASLVVWCM
>sp|MATRX_HRSVB|MATRIX protein|Human respiratory syncytial virus B
Query: 1 DIASLVVW 8
D ASL +W
Sbjct: 28 DPASLTIW 35
>sp|MATRX_HRSV|MATRIX protein|Human respiratory syncytial virus
Query: 1 DIASLVVW 8
D ASL +W
Sbjct: 28 DPASLTIW 35
>sp|MATRX_HRSVA|MATRIX protein|Human respiratory syncytial virus A
Query: 1 DIASLVVW 8
D ASL +W
Sbjct: 28 DPASLTIW 35
>sp|MATRX_HRSS2|MATRIX protein|Human respiratory syncytial virus A
Query: 1 DIASLVVW 8
D ASL +W
Sbjct: 28 DPASLTIW 35
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 SLVVWCM 10
SLVV CM
Sbjct: 104 SLVVSCM 110
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 SLVVWCM 10
SLVV CM
Sbjct: 104 SLVVSCM 110
>sp|U23_HHV6Z|PROTEIN U23|Human herpesvirus 6B (strain Z29)
Query: 2 IASLVVW 8
++SLV+W
Sbjct: 244 LSSLVIW 250
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka
Query: 1 DIASLVVWC 9
DI+ LVV C
Sbjct: 88 DISVLVVSC 96
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 DIASLVVWC 9
DI+ LVV C
Sbjct: 88 DISVLVVSC 96
>sp|U23_HHV6U|GLYCOPROTEIN U23|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 IASLVVW 8
++SLV+W
Sbjct: 181 LSSLVIW 187
25|Sequence|121|130|VVWCMAVGIS
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VVWCMAVGI 9
V WC+ VG+
Sbjct: 175 VDWCVTVGL 183
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VVWCMAVGI 9
V WC+ VG+
Sbjct: 175 VDWCVTVGL 183
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 VVWCMAVGIS 10
+ W M +GIS
Sbjct: 191 ISWMMKLGIS 200
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VVWCMAVGIS 10
+ W M +GIS
Sbjct: 217 ISWMMKLGIS 226
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 1 VVWCMAVGIS 10
+ W M +GIS
Sbjct: 187 ISWMMKLGIS 196
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 VVWCMAV 7
V+WC+++
Sbjct: 571 VIWCISL 577
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 VWCMAVGIS 10
+WC+ V ++
Sbjct: 5 IWCLVVCVN 13
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VWCMAVGIS 10
+WC+ V ++
Sbjct: 5 IWCLVVCVN 13
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VWCMAVGIS 10
+WC+ V ++
Sbjct: 5 IWCLVVCVN 13
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 WCMAV 7
WCM V
Sbjct: 2399 WCMKV 2403
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VVWCMAVGI 9
V W M +GI
Sbjct: 729 VSWVMKIGI 737
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VVWCMAVGI 9
V W M +GI
Sbjct: 729 VSWVMKIGI 737
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VVWCMAVGI 9
V W M +GI
Sbjct: 731 VSWTMKIGI 739
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VVWCMAVGI 9
V W M +GI
Sbjct: 731 VSWTMKIGI 739
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VVWCMAVGI 9
V W M +GI
Sbjct: 730 VSWTMKIGI 738
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VVWCMAVGI 9
V W M +GI
Sbjct: 729 VSWIMKIGI 737
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VVWCMAVGI 9
V W M +GI
Sbjct: 729 VSWIMKIGI 737
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VVWCMAVGI 9
V W M +GI
Sbjct: 729 VSWIMKIGI 737
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VVWCMAVGI 9
V W M +GI
Sbjct: 731 VSWTMKIGI 739
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VVWCMAVGI 9
V W M +GI
Sbjct: 731 VSWTMKIGI 739
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 4 CMAVGI 9
CMA+GI
Sbjct: 14 CMAIGI 19
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 4 CMAVGI 9
CMA+GI
Sbjct: 14 CMAIGI 19
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 VVWCM 5
+VWCM
Sbjct: 641 LVWCM 645
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 4 CMAVGI 9
CMA+GI
Sbjct: 14 CMAIGI 19
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 4 CMAVGI 9
CMA+GI
Sbjct: 14 CMAIGI 19
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 4 CMAVGI 9
CMA+GI
Sbjct: 14 CMAIGI 19
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 1 VVWCMAVGIS 10
V +C AVG++
Sbjct: 141 VEFCQAVGLN 150
>sp|VP22_HHV2H|TEGUMENT protein VP22|Human herpesvirus 2 (strain HG52)
Query: 2 VWCMAVG 8
V+C AVG
Sbjct: 200 VFCAAVG 206
>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)
Query: 2 VWCMAVG 8
V+C AVG
Sbjct: 200 VFCAAVG 206
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 4 CMAVGIS 10
C AVG+S
Sbjct: 499 CEAVGLS 505
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 4 CMAVGIS 10
C AVG+S
Sbjct: 499 CEAVGLS 505
>sp|NCAP_NIPAV|NUCLEOPROTEIN virus
Query: 1 VVWCMAVGIS 10
++W A+G++
Sbjct: 329 LLWSFAMGVA 338
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 VVWCMAVGIS 10
++W A+G++
Sbjct: 329 LLWSFAMGVA 338
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 2 VWCMAVGIS 10
+W A+G++
Sbjct: 331 IWSYAMGVA 339
26|Sequence|126|135|AVGISYISVY
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 2 VGISYIS 8
+G+SYIS
Sbjct: 164 IGVSYIS 170
27|Sequence|131|140|YISVYDHQGI
>sp|UL132_HCMVT|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 YISVYD 6
Y+SVYD
Sbjct: 228 YVSVYD 233
>sp|UL132_HCMVM|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YISVYD 6
Y+SVYD
Sbjct: 228 YVSVYD 233
>sp|UL132_HCMVA|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YISVYD 6
Y+SVYD
Sbjct: 228 YVSVYD 233
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 4 VYDHQG 9
VYDH G
Sbjct: 112 VYDHSG 117
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 4 VYDHQG 9
VYDH G
Sbjct: 112 VYDHSG 117
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 4 VYDHQG 9
VYDH G
Sbjct: 112 VYDHSG 117
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 4 VYDHQG 9
VYDH G
Sbjct: 112 VYDHSG 117
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 VYDHQG 9
VYDH G
Sbjct: 112 VYDHSG 117
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 VYDHQG 9
VYDH G
Sbjct: 112 VYDHSG 117
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 4 VYDHQG 9
VYDH G
Sbjct: 112 VYDHSG 117
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 4 VYDHQG 9
VYDH G
Sbjct: 112 VYDHSG 117
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 4 VYDHQG 9
VYDH G
Sbjct: 112 VYDHSG 117
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 4 VYDHQG 9
VYDH G
Sbjct: 112 VYDHSG 117
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 4 VYDHQG 9
VYDH G
Sbjct: 112 VYDHSG 117
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 4 VYDHQG 9
VYDH G
Sbjct: 112 VYDHSG 117
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 4 VYDHQG 9
VYDH G
Sbjct: 112 VYDHSG 117
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 ISVYDHQGI 10
I YDH G+
Sbjct: 501 IHAYDHGGV 509
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 VYDHQ 8
+YDHQ
Sbjct: 467 IYDHQ 471
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 YISVYDHQGI 10
YI+ Y QG+
Sbjct: 1325 YITTYPGQGL 1334
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 1 YISVYDHQG 9
Y YDH+G
Sbjct: 302 YWCEYDHRG 310
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YISVYDHQGI 10
YI+ Y QG+
Sbjct: 1325 YITTYPGQGL 1334
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 YISVYDHQGI 10
YISV+ +GI
Sbjct: 1120 YISVFCPKGI 1129
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SVYDHQ 8
+VYDH+
Sbjct: 463 AVYDHR 468
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SVYDHQ 8
+VYDH+
Sbjct: 463 AVYDHR 468
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 YISVYDHQGI 10
YISV+ +GI
Sbjct: 1130 YISVHCPKGI 1139
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 YISVYDHQGI 10
YISV+ +GI
Sbjct: 1130 YISVHCPKGI 1139
28|Sequence|136|145|DHQGIFKRNN
>sp|PG144_VARV|VIRION membrane protein OPG144 precursor|Variola virus
Query: 1 DHQGIFKRNN 10
D+ GIFK N+
Sbjct: 50 DYLGIFKNND 59
>sp|PG144_VAR67|VIRION membrane protein OPG144 precursor|Variola virus (isolate
Query: 1 DHQGIFKRNN 10
D+ GIFK N+
Sbjct: 50 DYLGIFKNND 59
>sp|PG144_VACCC|VIRION membrane protein OPG144 precursor|Vaccinia virus (strain
Query: 1 DHQGIFKRNN 10
D+ GIFK N+
Sbjct: 50 DYLGIFKNND 59
>sp|PG144_MONPV|VIRION membrane protein OPG144 precursor|Monkeypox virus (MPXV)
Query: 1 DHQGIFKRNN 10
D+ GIFK N+
Sbjct: 51 DYLGIFKNND 60
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 DHQGIFKR 8
+H+GI+K+
Sbjct: 878 EHKGIYKK 885
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 1 DHQGIFKRNN 10
DH GIF +N
Sbjct: 76 DHIGIFTSSN 85
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 1 DHQGIF 6
DH+G+F
Sbjct: 153 DHRGLF 158
>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 DHQGIFKRNN 10
DH+ +NN
Sbjct: 193 DHKAYLDKNN 202
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 2 HQGIFKRNN 10
QG+F+ +N
Sbjct: 350 QQGVFRYDN 358
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 DHQGIF 6
DH G+F
Sbjct: 346 DHSGLF 351
>sp|VP1_POVBA|MAJOR capsid protein VP1|BK polyomavirus (strain AS) (BKPyV)
Query: 1 DHQGIFKRNN 10
DH+ +NN
Sbjct: 193 DHKAYLDKNN 202
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 QGIFKRNN 10
+GIF R N
Sbjct: 2083 EGIFYRGN 2090
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 1 DHQGIF 6
DH+G F
Sbjct: 307 DHRGFF 312
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HQGIFK 7
H+GI+K
Sbjct: 58 HKGIYK 63
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 2 HQGIFK 7
H+GI+K
Sbjct: 58 HKGIYK 63
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 2 HQGIFK 7
H+GI+K
Sbjct: 58 HKGIYK 63
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 2 HQGIFK 7
H+GI+K
Sbjct: 58 HKGIYK 63
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 2 HQGIFK 7
H+GI+K
Sbjct: 58 HKGIYK 63
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 HQGIFK 7
H+GI+K
Sbjct: 58 HKGIYK 63
29|Sequence|141|150|FKRNNSRLMD
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 FKRNNSRLM 9
F RN+ RL+
Sbjct: 776 FNRNDGRLL 784
>sp|PB1F2_I96A2|PROTEIN PB1-F2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 RNNSRLM 9
RN++RLM
Sbjct: 33 RNSTRLM 39
>sp|PB1F2_I80AA|PROTEIN PB1-F2|Influenza A virus (strain A/India/6263/1980
Query: 3 RNNSRLM 9
RN++RLM
Sbjct: 33 RNSTRLM 39
>sp|PB1F2_I77AB|PROTEIN PB1-F2|Influenza A virus (strain A/USSR/90/1977
Query: 3 RNNSRLM 9
RN++RLM
Sbjct: 33 RNSTRLM 39
>sp|PB1F2_I77AA|PROTEIN PB1-F2|Influenza A virus (strain A/Brazil/11/1978
Query: 3 RNNSRLM 9
RN++RLM
Sbjct: 33 RNSTRLM 39
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FKRNNSRLMD 10
FK+ N +MD
Sbjct: 1657 FKKRNLTIMD 1666
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FKRNNSRLMD 10
FK+ N +MD
Sbjct: 1657 FKKRNLTIMD 1666
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FKRNNSRLMD 10
FK+ N +MD
Sbjct: 1657 FKKRNLTIMD 1666
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FKRNNSRLMD 10
FK+ N +MD
Sbjct: 1657 FKKRNLTIMD 1666
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FKRNNSRLMD 10
FK+ N +MD
Sbjct: 1657 FKKRNLTIMD 1666
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 FKRNNSRLMD 10
FK+ N +MD
Sbjct: 1659 FKKRNLTIMD 1668
>sp|PB1F2_I33A0|PROTEIN PB1-F2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 RNNSRLM 9
RN++RLM
Sbjct: 33 RNSTRLM 39
>sp|PB1F2_I35A3|PROTEIN PB1-F2|Influenza A virus (strain A/USA:Phila/1935
Query: 3 RNNSRLM 9
RN++RLM
Sbjct: 33 RNSTRLM 39
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 FKRNNSRLM 9
FK N R+M
Sbjct: 59 FKNNTERIM 67
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 FKRNNSRLM 9
FK N R+M
Sbjct: 59 FKNNTERIM 67
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FKRNNSRLM 9
FK N R+M
Sbjct: 59 FKNNTERIM 67
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 FKRNNSRLM 9
FK N R+M
Sbjct: 51 FKNNTERIM 59
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 FKRNNSRLM 9
FK N R+M
Sbjct: 59 FKNNTERIM 67
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 FKRNNSRLM 9
FK N R+M
Sbjct: 59 FKNNTERIM 67
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 FKRNNSRLM 9
FK N R+M
Sbjct: 59 FKNNTERIM 67
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 1 FKRNNSRLM 9
FK N R+M
Sbjct: 59 FKNNTERIM 67
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 FKRNNSRLM 9
FK N R+M
Sbjct: 59 FKNNTERIM 67
30|Sequence|146|155|SRLMDEILKQ
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 RLMDEIL 8
RL+DE+L
Sbjct: 3 RLLDEVL 9
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 4 MDEILKQ 10
MDE++KQ
Sbjct: 1395 MDELVKQ 1401
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 357 ARLMAEALKE 366
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 357 ARLMAEALKE 366
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 357 ARLMAEALKE 366
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 362 ARLMAEALKE 371
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 362 ARLMAEALKE 371
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 363 ARLMAEALKE 372
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 360 ARLMAEALKE 369
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 357 ARLMAEALKE 366
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 362 ARLMAEALKE 371
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 362 ARLMAEALKE 371
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 362 ARLMAEALKE 371
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 357 ARLMAEALKE 366
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 360 ARLMAEALKE 369
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 361 ARLMAEALKE 370
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 357 ARLMAEALKE 366
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 362 ARLMAEALKE 371
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 362 ARLMAEALKE 371
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 362 ARLMAEALKE 371
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 362 ARLMAEALKE 371
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 361 ARLMAEALKE 370
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 363 ARLMAEALKE 372
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 362 ARLMAEALKE 371
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 362 ARLMAEALKE 371
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SRLMDEILKQ 10
+RLM E LK+
Sbjct: 362 ARLMAEALKE 371
31|Sequence|151|160|EILKQQQELL
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EILKQQQELL 10
+++K+QQELL
Sbjct: 559 DVVKRQQELL 568
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EILKQQQELL 10
+++K+QQELL
Sbjct: 557 DVVKRQQELL 566
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EILKQQQELL 10
+++K+QQELL
Sbjct: 556 DVVKRQQELL 565
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EILKQQQELL 10
+++K+QQE+L
Sbjct: 550 DVVKRQQEML 559
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EILKQQQELL 10
+++K+QQE+L
Sbjct: 547 DVVKRQQEML 556
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EILKQQQELL 10
+++K+QQE+L
Sbjct: 546 DVVKRQQEML 555
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EILKQQQELL 10
+++K+QQE+L
Sbjct: 555 DVVKRQQEML 564
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EILKQQQELL 10
+++K+QQE+L
Sbjct: 550 DVVKRQQEML 559
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EILKQQQELL 10
+++K+QQE+L
Sbjct: 548 DVVKRQQEML 557
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EILKQQQELL 10
+++K+QQE+L
Sbjct: 548 DVVKRQQEML 557
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EILKQQQELL 10
+++K+QQE+L
Sbjct: 547 DVVKRQQEML 556
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EILKQQQE 8
EILK+Q+E
Sbjct: 55 EILKKQKE 62
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 KQQQELL 10
K+QQELL
Sbjct: 561 KRQQELL 567
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 KQQQELL 10
K+QQELL
Sbjct: 557 KRQQELL 563
>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 EILKQQQ 7
E+LKQ+Q
Sbjct: 329 EVLKQRQ 335
32|Sequence|156|165|QQELLGLDCS
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQELLGLD 8
+QELLGLD
Sbjct: 668 EQELLGLD 675
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 1 QQELLGLDCS 10
+QEL G+D +
Sbjct: 742 KQELFGMDVT 751
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 ELLGLDCS 10
ELLG+ CS
Sbjct: 851 ELLGIKCS 858
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 5 LGLDC 9
LGLDC
Sbjct: 476 LGLDC 480
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 5 LGLDC 9
LGLDC
Sbjct: 476 LGLDC 480
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 5 LGLDC 9
LGLDC
Sbjct: 472 LGLDC 476
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 LGLDCS 10
LGL+CS
Sbjct: 459 LGLECS 464
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 LGLDCS 10
LGL+CS
Sbjct: 459 LGLECS 464
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 LGLDCS 10
LGL+CS
Sbjct: 459 LGLECS 464
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 LGLDCS 10
LGL+CS
Sbjct: 459 LGLECS 464
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 LGLDCS 10
LGL+CS
Sbjct: 459 LGLECS 464
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 5 LGLDCS 10
LGLDC+
Sbjct: 369 LGLDCT 374
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 QQELLGLD 8
+ E+LGLD
Sbjct: 785 RNEILGLD 792
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QQELLGLD 8
+ E+LGLD
Sbjct: 800 RNEILGLD 807
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 LGLDC 9
LGLDC
Sbjct: 291 LGLDC 295
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 5 LGLDC 9
LG+DC
Sbjct: 477 LGMDC 481
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 2 QELLGLDC 9
+ LLG DC
Sbjct: 376 RALLGRDC 383
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 4 LLGLDCS 10
LLGL C+
Sbjct: 1899 LLGLPCA 1905
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 LLGLDCS 10
LLGL C+
Sbjct: 1899 LLGLPCA 1905
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 4 LLGLDCS 10
LLGL C+
Sbjct: 1899 LLGLPCA 1905
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 4 LLGLDCS 10
LLGL C+
Sbjct: 1899 LLGLPCA 1905
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 LLGLDCS 10
LLGL C+
Sbjct: 1899 LLGLPCA 1905
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 4 LLGLDCS 10
LLGL C+
Sbjct: 1899 LLGLPCA 1905
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 4 LLGLDCS 10
LLGL C+
Sbjct: 1899 LLGLPCA 1905
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 4 LLGLDCS 10
LLGL C+
Sbjct: 1899 LLGLPCA 1905
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 4 LLGLDCS 10
LLGL C+
Sbjct: 1899 LLGLPCA 1905
33|Sequence|161|170|GLDCSKYSPE
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DCSKYSPE 10
+C KYSPE
Sbjct: 140 NCRKYSPE 147
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 3 DCSKYSPE 10
DC +Y+P+
Sbjct: 454 DCDRYNPD 461
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 2 LDCSKYS 8
LDCS+Y+
Sbjct: 587 LDCSRYT 593
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 2 LDCSKYS 8
LDCS+Y+
Sbjct: 587 LDCSRYT 593
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DCSKYSP 9
DC +Y+P
Sbjct: 454 DCDRYNP 460
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 GLDCSKY 7
G+DC KY
Sbjct: 1140 GIDCIKY 1146
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 3 DCSKYSPE 10
+C KY PE
Sbjct: 140 NCRKYLPE 147
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 LDCSKYSP 9
+DC Y P
Sbjct: 2441 IDCDSYKP 2448
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 LDCSKYSP 9
+DC Y P
Sbjct: 2441 IDCDSYKP 2448
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 CSKYSP 9
CSKY P
Sbjct: 611 CSKYLP 616
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 3 DCSKYSP 9
DC ++SP
Sbjct: 68 DCCEHSP 74
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 3 DCSKYSP 9
DC ++SP
Sbjct: 68 DCCEHSP 74
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GLDCS 5
GLDCS
Sbjct: 1445 GLDCS 1449
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1200 CKKYAP 1205
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 GLDCSK 6
GLDC++
Sbjct: 1737 GLDCAR 1742
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 GLDCSK 6
GLDC++
Sbjct: 1736 GLDCAR 1741
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 GLDCSK 6
GLDC++
Sbjct: 1736 GLDCAR 1741
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 GLDCSK 6
GLDC++
Sbjct: 1736 GLDCAR 1741
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 GLDCSK 6
GLDC++
Sbjct: 1737 GLDCAR 1742
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 GLDCSK 6
GLDC++
Sbjct: 1737 GLDCAR 1742
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1186 CRKYAP 1191
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1186 CRKYAP 1191
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1193 CRKYAP 1198
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1196 CRKYAP 1201
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1195 CRKYAP 1200
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1203 CRKYAP 1208
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1185 CRKYAP 1190
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1198 CRKYAP 1203
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1185 CRKYAP 1190
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1195 CRKYAP 1200
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1205 CRKYAP 1210
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1189 CRKYAP 1194
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1184 CRKYAP 1189
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1197 CRKYAP 1202
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1187 CRKYAP 1192
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1187 CRKYAP 1192
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 4 CSKYSP 9
C KY+P
Sbjct: 1187 CRKYAP 1192
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 LDCSKYSPE 10
L C +SP+
Sbjct: 133 LQCEDFSPK 141
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 DCSKY 7
DC KY
Sbjct: 405 DCDKY 409
>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)
Query: 3 DCSKY 7
DC KY
Sbjct: 405 DCDKY 409
>sp|VPK2_VACCP|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 DCSKY 7
DC KY
Sbjct: 371 DCDKY 375
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DCSKY 7
DC KY
Sbjct: 405 DCDKY 409
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 3 DCSKY 7
DC KY
Sbjct: 405 DCDKY 409
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 3 DCSKY 7
DC KY
Sbjct: 405 DCDKY 409
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster
Query: 4 CSKYSPE 10
C KY P+
Sbjct: 47 CGKYVPK 53
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster
Query: 4 CSKYSPE 10
C KY P+
Sbjct: 47 CGKYVPK 53
>sp|CEP1_HHV2H|CYTOPLASMIC envelopment protein 1|Human herpesvirus 2 (strain HG52)
Query: 3 DCSKYSP 9
DC Y+P
Sbjct: 252 DCVAYNP 258
34|Sequence|166|175|KYSPEFANSN
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 YSPEFANS 9
++PE ANS
Sbjct: 918 FAPELANS 925
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 YSPEFANS 9
++PE ANS
Sbjct: 918 FAPELANS 925
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 YSPEFANS 9
++PE ANS
Sbjct: 918 FAPELANS 925
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 YSPEFANS 9
++PE ANS
Sbjct: 918 FAPELANS 925
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 YSPEFANS 9
++PE ANS
Sbjct: 846 FAPELANS 853
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 YSPEFANS 9
++PE ANS
Sbjct: 918 FAPELANS 925
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 YSPEFANS 9
++PE ANS
Sbjct: 918 FAPELANS 925
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 YSPEFANS 9
++PE ANS
Sbjct: 918 FAPELANS 925
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 YSPEFANS 9
++PE ANS
Sbjct: 918 FAPELANS 925
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 KYSPEFAN 8
+Y+PEFA
Sbjct: 437 QYAPEFAT 444
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 KYSPEFAN 8
+Y+PEFA
Sbjct: 437 QYAPEFAT 444
>sp|E310_ADE07|EARLY E3B 10.4 kDa protein|Human adenovirus B serotype 7
Query: 1 KYSPEFANSN 10
++ PE+ N N
Sbjct: 74 RHHPEYRNQN 83
>sp|E310_ADE03|EARLY E3B 10.4 kDa protein|Human adenovirus B serotype 3
Query: 1 KYSPEFANSN 10
++ PE+ N N
Sbjct: 74 RHHPEYRNQN 83
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 YSPEFANS 9
++PE AN+
Sbjct: 915 FAPELANN 922
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 YSPEFANS 9
++PE AN+
Sbjct: 911 FAPELANN 918
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 YSPEFANS 9
++PE AN+
Sbjct: 915 FAPELANN 922
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster
Query: 1 KYSPEFA 7
KY P+FA
Sbjct: 49 KYVPKFA 55
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster
Query: 1 KYSPEFA 7
KY P+FA
Sbjct: 49 KYVPKFA 55
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 YSPEFANSN 10
+SP+F+N +
Sbjct: 91 FSPDFSNVD 99
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 1 KYSPEF 6
KYSPE
Sbjct: 100 KYSPEI 105
35|Sequence|171|180|FANSNDKDDQ
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 1 FANSNDKDD 9
FAN ND+ D
Sbjct: 133 FANGNDQQD 141
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FANSNDKDDQ 10
+ANS + DD+
Sbjct: 400 WANSTESDDK 409
>sp|VE7_HPV42|PROTEIN E7|Human papillomavirus 42
Query: 3 NSNDKDDQ 10
+S+D+DDQ
Sbjct: 32 DSSDEDDQ 39
>sp|UL61_HCMVA|UNCHARACTERIZED protein UL61|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ANSNDKDDQ 10
AN+ DK D+
Sbjct: 87 ANAQDKADR 95
36|Sequence|176|185|DKDDQVLNCH
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 DKDDQVLNCH 10
D D+ V NCH
Sbjct: 823 DSDNDVQNCH 832
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 2 KDDQVLNCH 10
KD VLN H
Sbjct: 72 KDSDVLNSH 80
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 2 KDDQVLNCH 10
KD VLN H
Sbjct: 72 KDSDVLNSH 80
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KDDQVLNCH 10
KD VLN H
Sbjct: 72 KDSDVLNSH 80
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 DKDDQVLNCH 10
D+ D+++N H
Sbjct: 140 DRRDEIINIH 149
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 KDDQVLNC 9
KDD +L C
Sbjct: 884 KDDIILTC 891
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 KDDQVLNC 9
KDD +L C
Sbjct: 884 KDDLILTC 891
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 KDDQVLNC 9
KDD +L C
Sbjct: 884 KDDIILTC 891
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 KDDQVLNC 9
+DD++ NC
Sbjct: 997 RDDKLKNC 1004
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 KDDQVLNC 9
+DD++ NC
Sbjct: 997 RDDKLKNC 1004
>sp|REV_HV1S2|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 DKDDQVL 7
D DDQ+L
Sbjct: 7 DSDDQLL 13
>sp|REV_HV1S9|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 DKDDQVL 7
D DDQ+L
Sbjct: 7 DNDDQLL 13
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 KDDQVLNC 9
+DD +L C
Sbjct: 884 RDDIILTC 891
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 KDDQVLNC 9
+DD +L C
Sbjct: 886 QDDLILTC 893
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 KDDQVLNC 9
+DD +L C
Sbjct: 886 QDDLILTC 893
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 KDDQVLNC 9
+DD +L C
Sbjct: 886 QDDLILTC 893
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DKDDQVL 7
+KDD+V+
Sbjct: 510 EKDDEVM 516
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DKDDQVL 7
+KDD+V+
Sbjct: 510 EKDDEVM 516
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 3 DDQVLNC 9
DD++ NC
Sbjct: 998 DDRLKNC 1004
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 DDQVLNC 9
DD++ NC
Sbjct: 998 DDRLKNC 1004
37|Sequence|181|190|VLNCHLAVKV
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 3 NCHLAV 8
NCHL V
Sbjct: 949 NCHLTV 954
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 3 NCHLAV 8
NCHL V
Sbjct: 949 NCHLTV 954
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 3 NCHLAV 8
NCHL V
Sbjct: 949 NCHLTV 954
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 NCHLAV 8
NCHL V
Sbjct: 949 NCHLTV 954
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 3 NCHLAV 8
NCHL V
Sbjct: 949 NCHLTV 954
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 3 NCHLAV 8
NCHL V
Sbjct: 949 NCHLTV 954
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 3 NCHLAV 8
NCHL V
Sbjct: 949 NCHLTV 954
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 3 NCHLAV 8
NCHL V
Sbjct: 949 NCHLTV 954
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 3 NCHLAV 8
NCHL +
Sbjct: 949 NCHLTL 954
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 VLNCHLAVKV 10
+L+CH A V
Sbjct: 19 LLDCHFAQNV 28
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 VLNCHLA 7
VLN HLA
Sbjct: 886 VLNRHLA 892
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 VLNCHLAVKV 10
V+N HLA V
Sbjct: 876 VVNRHLATHV 885
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 VLNCHLAVKV 10
V+N HLA V
Sbjct: 866 VVNRHLATHV 875
>sp|NSP1A_ROTGI|NON-STRUCTURAL protein 1, peptide 1|Rotavirus B (isolate RVB/Rat/United
Query: 1 VLNCHLAVK 9
VLNC+L K
Sbjct: 60 VLNCYLCNK 68
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 VLNCHLAV 8
++NC LA+
Sbjct: 2028 LINCGLAI 2035
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 VLNCHLAV 8
++NC LA+
Sbjct: 2028 LINCGLAI 2035
38|Sequence|186|195|LAVKVLSPED
>sp|YVAH_VACCC|UNCHARACTERIZED 14.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LAVKVLSP 8
L +K+LSP
Sbjct: 39 LGIKILSP 46
39|Sequence|191|200|LSPEDGKADI
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LSPEDGKAD 9
L PED K+D
Sbjct: 276 LDPEDWKSD 284
>sp|MB43_HHV11|MEMBRANE protein UL43|Human herpesvirus 1 (strain 17)
Query: 1 LSPEDGKADI 10
+SPEDG+ +
Sbjct: 10 VSPEDGQGRV 19
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 3 PEDGKADI 10
PEDGK +
Sbjct: 46 PEDGKEPV 53
>sp|A28_MCV1|ENVELOPE protein A28 homolog|Molluscum contagiosum virus subtype 1
Query: 1 LSPEDGKADI 10
P DG AD+
Sbjct: 59 FDPNDGVADV 68
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 LSPEDGKA 8
L+PED A
Sbjct: 339 LAPEDANA 346
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 LSPEDGKA 8
L+PED A
Sbjct: 339 LAPEDANA 346
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 LSPEDGKA 8
L+PED A
Sbjct: 336 LAPEDANA 343
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 LSPEDGKA 8
L+PED A
Sbjct: 337 LAPEDANA 344
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 LSPEDGKA 8
L+PED A
Sbjct: 338 LAPEDSNA 345
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 LSPEDGKA 8
L+PED A
Sbjct: 337 LAPEDSNA 344
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 LSPEDGKA 8
L+PED A
Sbjct: 336 LAPEDSNA 343
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 SPEDGK 7
SPE GK
Sbjct: 77 SPESGK 82
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 LSPEDGKA 8
L+PED A
Sbjct: 338 LAPEDSNA 345
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 LSPEDGKA 8
L+PED A
Sbjct: 337 LAPEDSNA 344
40|Sequence|196|205|GKADIVRAAQ
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 1 GKADIVRAAQ 10
GK +IVRA +
Sbjct: 164 GKCEIVRATE 173
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 1 GKADIVRAAQ 10
GK +IVRA +
Sbjct: 164 GKCEIVRATE 173
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 1 GKADIVRAA 9
GK ++VRA+
Sbjct: 167 GKCNVVRAS 175
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 GKADIVRAAQ 10
GK+ VRAA+
Sbjct: 913 GKSYFVRAAK 922
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 GKADIVRAAQ 10
GK+ VRAA+
Sbjct: 913 GKSYFVRAAK 922
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 GKADIVRAAQ 10
GK+ VRAA+
Sbjct: 909 GKSYFVRAAK 918
41|Sequence|201|210|VRAAQDFCQL
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 DFCQL 10
DFCQL
Sbjct: 1294 DFCQL 1298
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 DFCQL 10
DFCQL
Sbjct: 1294 DFCQL 1298
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 DFCQL 10
DFCQL
Sbjct: 1294 DFCQL 1298
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 DFCQL 10
DFCQL
Sbjct: 1294 DFCQL 1298
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 DFCQL 10
DFCQL
Sbjct: 1294 DFCQL 1298
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 DFCQL 10
DFCQL
Sbjct: 1294 DFCQL 1298
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 DFCQL 10
DFCQL
Sbjct: 1294 DFCQL 1298
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 DFCQL 10
DFCQL
Sbjct: 1294 DFCQL 1298
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 DFCQL 10
DFCQL
Sbjct: 1294 DFCQL 1298
>sp|PG107_VACCC|PROTEIN H2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 AAQDFCQ 9
+AQ FCQ
Sbjct: 143 SAQQFCQ 149
>sp|PG107_VAR67|LATE protein H2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 AAQDFCQ 9
+AQ FCQ
Sbjct: 143 SAQQFCQ 149
>sp|PG107_MONPV|MPXVGP092 virus (MPXV)
Query: 3 AAQDFCQ 9
+AQ FCQ
Sbjct: 143 SAQQFCQ 149
>sp|H2_VARV|LATE protein H2|Variola virus
Query: 3 AAQDFCQ 9
+AQ FCQ
Sbjct: 143 SAQQFCQ 149
>sp|H2_VACCA|LATE protein H2|Vaccinia virus (strain Ankara) (VACV)
Query: 3 AAQDFCQ 9
+AQ FCQ
Sbjct: 143 SAQQFCQ 149
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 VRAAQDFC 8
+RAA FC
Sbjct: 2691 LRAANSFC 2698
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 VRAAQDFCQ 9
VRA+ D C+
Sbjct: 707 VRASVDLCK 715
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 VRAAQDFCQ 9
VRA+ D C+
Sbjct: 707 VRASVDLCK 715
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 VRAAQDFCQL 10
+ A QD C L
Sbjct: 997 LEAPQDICPL 1006
42|Sequence|206|215|DFCQLVAQKQ
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DFCQLVA 7
DFCQLV+
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DFCQLVA 7
DFCQLV+
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DFCQLVA 7
DFCQLV+
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DFCQLVA 7
DFCQLV+
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DFCQLVA 7
DFCQLV+
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DFCQLVA 7
DFCQLV+
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DFCQLVA 7
DFCQLV+
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DFCQLVA 7
DFCQLV+
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DFCQLVA 7
DFCQLV+
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 FCQLVAQKQ 10
FCQ+V+ Q
Sbjct: 1193 FCQMVSCAQ 1201
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain GD1)
Query: 2 FCQLV 6
FCQLV
Sbjct: 211 FCQLV 215
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 2 FCQLV 6
FCQLV
Sbjct: 211 FCQLV 215
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 2 FCQLV 6
FCQLV
Sbjct: 211 FCQLV 215
>sp|VGCR_HHV6Z|G-PROTEIN coupled receptor|Human herpesvirus 6B (strain Z29)
Query: 2 FCQLV 6
FCQLV
Sbjct: 104 FCQLV 108
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1314 FCQMVS 1319
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1314 FCQMVS 1319
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1315 FCQMVS 1320
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1315 FCQMVS 1320
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1317 FCQMVS 1322
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1317 FCQMVS 1322
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1286 FCQMVS 1291
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1289 FCQMVS 1294
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1270 FCQMVS 1275
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1277 FCQMVS 1282
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1277 FCQMVS 1282
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1273 FCQMVS 1278
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1273 FCQMVS 1278
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1290 FCQMVS 1295
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1301 FCQMVS 1306
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1301 FCQMVS 1306
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1303 FCQMVS 1308
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1377 FCQMVS 1382
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1376 FCQMVS 1381
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1376 FCQMVS 1381
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1376 FCQMVS 1381
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1374 FCQMVS 1379
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1299 FCQMVS 1304
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1298 FCQMVS 1303
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1300 FCQMVS 1305
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1298 FCQMVS 1303
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1308 FCQMVS 1313
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1296 FCQMVS 1301
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1301 FCQMVS 1306
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1289 FCQMVS 1294
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1289 FCQMVS 1294
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1290 FCQMVS 1295
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1288 FCQMVS 1293
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1288 FCQMVS 1293
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1290 FCQMVS 1295
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1290 FCQMVS 1295
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1292 FCQMVS 1297
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1287 FCQMVS 1292
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1306 FCQMVS 1311
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1322 FCQMVS 1327
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1314 FCQMVS 1319
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1301 FCQMVS 1306
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1301 FCQMVS 1306
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 FCQLVA 7
FCQ+V+
Sbjct: 1370 FCQMVS 1375
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 FCQLVAQK 9
FC + AQK
Sbjct: 11 FCLVFAQK 18
>sp|UL33_HHV6U|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 6A (strain
Query: 2 FCQLV 6
FCQLV
Sbjct: 100 FCQLV 104
43|Sequence|211|220|VAQKQKRPTD
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 2 AQKQKRPT 9
AQKQ RPT
Sbjct: 226 AQKQPRPT 233
>sp|SF33K_ADE02|PROTEIN 33K|Human adenovirus C serotype 2
Query: 1 VAQKQKRP 8
V QKQ+RP
Sbjct: 120 VTQKQRRP 127
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VAQKQKRPTD 10
V +Q+RP D
Sbjct: 9 VNARQQRPAD 18
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VAQKQKRPTD 10
V +Q+RP D
Sbjct: 9 VNARQQRPAD 18
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 3 QKQKRPTD 10
Q Q+RP D
Sbjct: 225 QSQQRPLD 232
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 3 QKQKRPTD 10
Q Q+RP D
Sbjct: 225 QSQQRPLD 232
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 3 QKQKRPTD 10
Q Q+RP D
Sbjct: 225 QSQQRPLD 232
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 3 QKQKRPTD 10
Q Q+RP D
Sbjct: 225 QSQQRPLD 232
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 KQKRP 8
KQKRP
Sbjct: 1887 KQKRP 1891
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 KQKRP 8
KQKRP
Sbjct: 1887 KQKRP 1891
44|Sequence|216|225|KRPTDLDVDT
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 KRPTDL 6
KRPTDL
Sbjct: 64 KRPTDL 69
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 PTDLDVDT 10
PT LD+DT
Sbjct: 723 PTQLDLDT 730
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 PTDLDVDT 10
PT LD+DT
Sbjct: 723 PTQLDLDT 730
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 PTDLDVDT 10
PT LD+DT
Sbjct: 723 PTQLDLDT 730
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PTDLDVDT 10
PT L VDT
Sbjct: 5949 PTHLSVDT 5956
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 4 TDLDVDT 10
TD D+DT
Sbjct: 279 TDFDIDT 285
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 RPTDLDV 8
RPT LD+
Sbjct: 4523 RPTMLDI 4529
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 2 RPTDLD 7
RPTDL+
Sbjct: 474 RPTDLE 479
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 RPTDLD 7
RPTDL+
Sbjct: 475 RPTDLE 480
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 KRPTDLDVDT 10
K PTD D T
Sbjct: 593 KNPTDTDHGT 602
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 1 KRPTDLDV 8
K P D+D+
Sbjct: 173 KNPNDVDI 180
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 PTDLDVDT 10
P+DLD D
Sbjct: 1690 PSDLDADA 1697
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 1 KRPTDLDV 8
K P D+D+
Sbjct: 173 KNPNDVDI 180
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KRPTDLDV 8
K P D+D+
Sbjct: 173 KNPNDVDI 180
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 5 DLDVDT 10
D+DVDT
Sbjct: 171 DIDVDT 176
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 KRPTDLDVDT 10
K+ TD+ VD+
Sbjct: 4131 KQLTDISVDS 4140
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 KRPTDLDVDT 10
K+ TD+ VD+
Sbjct: 4151 KQLTDISVDS 4160
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 KRPTDLDVDT 10
K+ TD+ VD+
Sbjct: 4131 KQLTDISVDS 4140
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 KRPTDLDVDT 10
K+ TD+ VD+
Sbjct: 4151 KQLTDISVDS 4160
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 KRPTDLDVDT 10
K+ TD+ VD+
Sbjct: 4181 KQLTDISVDS 4190
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 KRPTDLDVDT 10
K+ TD+ VD+
Sbjct: 4181 KQLTDISVDS 4190
45|Sequence|221|230|LDVDTLASLL
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 3 VDTLASLL 10
+DT+ASLL
Sbjct: 32 IDTMASLL 39
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LDVDTLASL 9
L+VD ASL
Sbjct: 265 LNVDNFASL 273
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LDVDTLASL 9
L+VD ASL
Sbjct: 265 LNVDNFASL 273
46|Sequence|226|235|LASLLSSNGC
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LASLLSSNGC 10
L +LLSSN C
Sbjct: 404 LTNLLSSNLC 413
47|Sequence|231|240|SSNGCPDPDL
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 6 PDPDL 10
PDPDL
Sbjct: 480 PDPDL 484
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 NGCPDPDL 10
NGCP P L
Sbjct: 332 NGCPFPAL 339
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 3 NGCPDP 8
+GCP P
Sbjct: 475 DGCPKP 480
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 NGCPDPDL 10
NGCP P L
Sbjct: 332 NGCPFPAL 339
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NGCPDPDL 10
NGCP P L
Sbjct: 332 NGCPFPAL 339
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 5 CPDPD 9
CPDP+
Sbjct: 31 CPDPE 35
>sp|KTHY_VARV|THYMIDYLATE kinase|Variola virus
Query: 3 NGCPDPDL 10
+G P PDL
Sbjct: 117 SGLPKPDL 124
>sp|KTHY_VAR67|THYMIDYLATE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 NGCPDPDL 10
+G P PDL
Sbjct: 117 SGLPKPDL 124
>sp|KTHY_VACCT|THYMIDYLATE kinase|Vaccinia virus (strain Tian Tan)
Query: 3 NGCPDPDL 10
+G P PDL
Sbjct: 117 SGLPKPDL 124
>sp|KTHY_VACCC|THYMIDYLATE kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 NGCPDPDL 10
+G P PDL
Sbjct: 117 SGLPKPDL 124
>sp|KTHY_VACCA|THYMIDYLATE kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 NGCPDPDL 10
+G P PDL
Sbjct: 117 SGLPKPDL 124
>sp|KTHY_MONPV|THYMIDYLATE kinase|Monkeypox virus (MPXV)
Query: 3 NGCPDPDL 10
+G P PDL
Sbjct: 117 SGLPKPDL 124
>sp|KTHY_CWPXG|THYMIDYLATE kinase|Cowpox virus (strain GRI-90 /
Query: 3 NGCPDPDL 10
+G P PDL
Sbjct: 117 SGLPKPDL 124
>sp|KTHY_CWPXB|THYMIDYLATE kinase|Cowpox virus (strain Brighton Red)
Query: 3 NGCPDPDL 10
+G P PDL
Sbjct: 117 SGLPKPDL 124
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 5 CPDPD 9
CPDP+
Sbjct: 31 CPDPE 35
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 3 NGCPDPD 9
N C DPD
Sbjct: 307 NECLDPD 313
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 5 CPDPDL 10
CPDP +
Sbjct: 76 CPDPSV 81
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 GCPDPD 9
GC +PD
Sbjct: 2152 GCENPD 2157
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 SSNGCPDP 8
+ +GCP P
Sbjct: 852 NKDGCPKP 859
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 5 CPDPDL 10
CP+P++
Sbjct: 770 CPEPEV 775
>sp|Y172_ADE02|UNCHARACTERIZED protein D-172|Human adenovirus C serotype 2
Query: 2 SNGCPD 7
S GCPD
Sbjct: 67 SKGCPD 72
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 GCPDPD 9
GC +PD
Sbjct: 2152 GCENPD 2157
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 5 CPDPDL 10
CP+P++
Sbjct: 770 CPEPEV 775
>sp|ORF2_TTVVG|UNCHARACTERIZED ORF2 protein|Torque teno virus (isolate Human/Ghana/GH1/1996)
Query: 4 GCPD 7
GCPD
Sbjct: 59 GCPD 62
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 4 GCPDPDL 10
G PDP+L
Sbjct: 83 GLPDPNL 89
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 5 CPDPD 9
CP+P+
Sbjct: 770 CPEPE 774
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 5 CPDPD 9
CP+P+
Sbjct: 770 CPEPE 774
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GCPDPDL 10
GC +P+L
Sbjct: 277 GCREPEL 283
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GCPDPDL 10
GC +P+L
Sbjct: 277 GCREPEL 283
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GCPDPDL 10
GC +P+L
Sbjct: 277 GCREPEL 283
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 4 GCPDPDL 10
G PDP+L
Sbjct: 83 GLPDPNL 89
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 5 CPDPD 9
CP+P+
Sbjct: 770 CPEPE 774
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 5 CPDPD 9
CP+P+
Sbjct: 770 CPEPE 774
>sp|REV_HV190|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 2 SNGCPDP 8
SN CP+P
Sbjct: 25 SNPCPEP 31
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 GCPDP 8
GCP P
Sbjct: 1355 GCPKP 1359
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 4 GCPDPDL 10
G PDP L
Sbjct: 83 GLPDPQL 89
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 448 NSSGCPE 454
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 448 NSSGCPE 454
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 448 NSSGCPE 454
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 448 NSSGCPE 454
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 448 NSSGCPE 454
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 448 NSSGCPE 454
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 4 GCPDPDL 10
G PDP L
Sbjct: 81 GLPDPSL 87
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 448 NSSGCPE 454
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 447 NSSGCPE 453
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 448 NSSGCPE 454
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 448 NSSGCPE 454
>sp|ORF2_TTVA1|UNCHARACTERIZED ORF2 protein|Torque teno virus 1 (isolate
Query: 4 GCPD 7
GCPD
Sbjct: 111 GCPD 114
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 448 NSSGCPE 454
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 SNGCPDP 8
S GCP P
Sbjct: 2355 SFGCPPP 2361
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 448 NSSGCPE 454
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 448 NSSGCPE 454
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 SSNGCPD 7
+ N CPD
Sbjct: 158 AKNWCPD 164
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 1 SSNGCPDPDL 10
SS PDPD
Sbjct: 269 SSTVAPDPDF 278
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 449 NSSGCPE 455
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 5 CPDPD 9
C DPD
Sbjct: 549 CQDPD 553
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 447 NSSGCPE 453
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 447 NSSGCPE 453
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 4 GCPDP 8
GC DP
Sbjct: 196 GCADP 200
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 4 GCPDPDL 10
G PD DL
Sbjct: 530 GLPDEDL 536
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 SSNGCPD 7
+S+GCP+
Sbjct: 448 NSSGCPE 454
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 4 GCPDPDL 10
G PD DL
Sbjct: 530 GLPDEDL 536
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 4 GCPDPDL 10
G PDP L
Sbjct: 82 GLPDPQL 88
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 4 GCPDPDL 10
G PD DL
Sbjct: 530 GLPDEDL 536
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 4 GCPDPDL 10
G PD DL
Sbjct: 530 GLPDEDL 536
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 4 GCPDPDL 10
G PD DL
Sbjct: 531 GLPDEDL 537
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 4 GCPDPDL 10
G PD DL
Sbjct: 530 GLPDEDL 536
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 4 GCPDPDL 10
G PD DL
Sbjct: 530 GLPDEDL 536
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 4 GCPDPDL 10
G PD DL
Sbjct: 530 GLPDEDL 536
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 4 GCPDPDL 10
G PD DL
Sbjct: 530 GLPDEDL 536
48|Sequence|236|245|PDPDLVLKFG
>sp|OX2V_HHV6Z|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6B (strain
Query: 1 PDPDLVLKF 9
P P++V+KF
Sbjct: 170 PKPNVVIKF 178
>sp|OX2V_HHV6U|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6A (strain
Query: 1 PDPDLVLKF 9
P P++V+KF
Sbjct: 169 PKPNVVIKF 177
>sp|KTHY_VARV|THYMIDYLATE kinase|Variola virus
Query: 1 PDPDLVL 7
P PDLV+
Sbjct: 120 PKPDLVI 126
>sp|KTHY_VAR67|THYMIDYLATE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PDPDLVL 7
P PDLV+
Sbjct: 120 PKPDLVI 126
>sp|KTHY_VACCT|THYMIDYLATE kinase|Vaccinia virus (strain Tian Tan)
Query: 1 PDPDLVL 7
P PDLV+
Sbjct: 120 PKPDLVI 126
>sp|KTHY_VACCC|THYMIDYLATE kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PDPDLVL 7
P PDLV+
Sbjct: 120 PKPDLVI 126
>sp|KTHY_VACCA|THYMIDYLATE kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PDPDLVL 7
P PDLV+
Sbjct: 120 PKPDLVI 126
>sp|KTHY_MONPV|THYMIDYLATE kinase|Monkeypox virus (MPXV)
Query: 1 PDPDLVL 7
P PDLV+
Sbjct: 120 PKPDLVI 126
>sp|KTHY_CWPXG|THYMIDYLATE kinase|Cowpox virus (strain GRI-90 /
Query: 1 PDPDLVL 7
P PDLV+
Sbjct: 120 PKPDLVI 126
>sp|KTHY_CWPXB|THYMIDYLATE kinase|Cowpox virus (strain Brighton Red)
Query: 1 PDPDLVL 7
P PDLV+
Sbjct: 120 PKPDLVI 126
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 DPDLVLKFG 10
DP L LK G
Sbjct: 1314 DPKLYLKIG 1322
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PDPDLVLKF 9
PD D V+K+
Sbjct: 180 PDEDFVIKW 188
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 PDPDLVLK 8
PDP +LK
Sbjct: 268 PDPSDILK 275
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 PDPDLVLK 8
PDP +LK
Sbjct: 268 PDPSDILK 275
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 PDPDLVL 7
P+PD+V+
Sbjct: 2162 PEPDVVI 2168
>sp|VHR2_CWPXG|PROBABLE host range protein 2|Cowpox virus (strain GRI-90 /
Query: 2 DPDLVLKF 9
DPDL+ ++
Sbjct: 99 DPDLIDRY 106
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 PDPDLVLKF 9
PD L LKF
Sbjct: 768 PDAPLRLKF 776
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 PDPDLVL 7
PD DL++
Sbjct: 532 PDEDLII 538
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 3 PDLVLKF 9
P++VLK+
Sbjct: 606 PEIVLKY 612
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 3 PDLVLKF 9
P++VLK+
Sbjct: 606 PEIVLKY 612
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 3 PDLVLKF 9
P++VLK+
Sbjct: 606 PEIVLKY 612
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 PDPDLVL 7
PD DL++
Sbjct: 532 PDEDLII 538
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 PDPDLVL 7
PD DL++
Sbjct: 532 PDEDLII 538
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 1 PDPDLVL 7
PD DL++
Sbjct: 533 PDEDLII 539
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 PDPDLVL 7
PD DL++
Sbjct: 532 PDEDLII 538
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 PDPDLVL 7
PD DL++
Sbjct: 532 PDEDLII 538
49|Sequence|241|250|VLKFGPVDST
>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)
Query: 1 VLKFGPVD 8
VLK GP D
Sbjct: 17 VLKLGPAD 24
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 VLKFGPVDST 10
+L+ PVD T
Sbjct: 1350 ILELAPVDQT 1359
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LKFGPVDS 9
L+F P+DS
Sbjct: 195 LEFTPIDS 202
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LKFGPVDS 9
L+F P+DS
Sbjct: 195 LEFTPIDS 202
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LKFGPVDS 9
L+F P+DS
Sbjct: 195 LEFTPIDS 202
>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)
Query: 2 LKFGPVDS 9
L+F P+DS
Sbjct: 195 LEFTPIDS 202
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 1 VLKFGPVDS 9
V GPVDS
Sbjct: 253 VAHIGPVDS 261
>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a
Query: 1 VLKFGPVDS 9
V GPVDS
Sbjct: 253 VAHIGPVDS 261
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 VLKFGPVDST 10
+++ PVD T
Sbjct: 1350 IIELAPVDQT 1359
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 VLKFGPVDST 10
+++ PVD T
Sbjct: 1350 IIELAPVDQT 1359
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 KFGPV 7
KFGPV
Sbjct: 137 KFGPV 141
>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 5 GPVDST 10
GP DST
Sbjct: 20 GPTDST 25
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 VLKFGPVD 8
+L+F PVD
Sbjct: 65 MLRFVPVD 72
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 VLKFGPVD 8
+L+F PVD
Sbjct: 65 MLRFVPVD 72
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 1 VLKFGPVD 8
+L+F PVD
Sbjct: 65 MLRFVPVD 72
50|Sequence|246|255|PVDSTLGFLP
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 DSTLGFLP 10
+ST+ FLP
Sbjct: 1164 ESTINFLP 1171
>sp|X_HBVC0|PROTEIN X|Hepatitis B virus genotype C
Query: 1 PVDSTLGFLP 10
PV +LG LP
Sbjct: 29 PVSGSLGALP 38
>sp|VB10_VACCT|KELCH repeat protein B10|Vaccinia virus (strain Tian Tan)
Query: 2 VDSTLGFL 9
+DST G L
Sbjct: 71 IDSTFGML 78
>sp|VB10_VACCC|KELCH repeat protein B10|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VDSTLGFL 9
+DST G L
Sbjct: 71 IDSTFGML 78
>sp|VB10_VACCA|KELCH repeat protein B10|Vaccinia virus (strain Ankara) (VACV)
Query: 2 VDSTLGFL 9
+DST G L
Sbjct: 71 IDSTFGML 78
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 1 PVDSTLGF 8
PVD GF
Sbjct: 547 PVDDEAGF 554
51|Sequence|251|260|LGFLPWHIRL
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 LGFLPW 6
LGF PW
Sbjct: 431 LGFGPW 436
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 LPWH 7
LPWH
Sbjct: 1813 LPWH 1816
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 4 LPWH 7
LPWH
Sbjct: 1813 LPWH 1816
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 4 LPWH 7
LPWH
Sbjct: 1813 LPWH 1816
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 6 WHIRL 10
WH+RL
Sbjct: 781 WHVRL 785
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 3 FLPWHIRL 10
F+P+HI++
Sbjct: 424 FVPFHIQV 431
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 3 FLPWHIRL 10
F+P+HI++
Sbjct: 522 FVPFHIQV 529
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 LGFLPWHIR 9
L +L WH++
Sbjct: 3022 LNYLGWHLK 3030
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 LGFLPWHIR 9
L +L WH++
Sbjct: 3026 LNYLGWHLK 3034
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 LGFLPWHIR 9
L +L WH++
Sbjct: 3024 LNYLGWHLK 3032
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 LGFLPWHIR 9
L +L WH++
Sbjct: 3024 LNYLGWHLK 3032
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 LGFLPWHIR 9
L +L WH++
Sbjct: 3026 LNYLGWHLK 3034
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LGFLPWHIR 9
L +L WH++
Sbjct: 3024 LNYLGWHLK 3032
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 LGFLPWHIR 9
L +L WH++
Sbjct: 3024 LNYLGWHLK 3032
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 LGFLPWHIR 9
L +L WH++
Sbjct: 3024 LNYLGWHLK 3032
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 LGFLPWHIR 9
L +L WH++
Sbjct: 3024 LNYLGWHLK 3032
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 6 WHIRL 10
WH+RL
Sbjct: 1313 WHLRL 1317
>sp|NCAP_TOSV|NUCLEOPROTEIN virus (Tos)
Query: 2 GFLPWHIR 9
F+PW ++
Sbjct: 115 AFVPWTVQ 122
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 GFLPW 6
GF PW
Sbjct: 629 GFEPW 633
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 GFLPWH 7
GF WH
Sbjct: 182 GFYNWH 187
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 GFLPWH 7
GF WH
Sbjct: 187 GFYNWH 192
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 GFLPWH 7
GF WH
Sbjct: 187 GFYNWH 192
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GFLPWH 7
GF WH
Sbjct: 184 GFYNWH 189
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GFLPWH 7
GF WH
Sbjct: 184 GFYNWH 189
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GFLPWH 7
GF WH
Sbjct: 184 GFYNWH 189
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 GFLPWH 7
GF WH
Sbjct: 187 GFYNWH 192
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GFLPWH 7
GF WH
Sbjct: 183 GFYNWH 188
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 GFLPWH 7
GF WH
Sbjct: 182 GFYNWH 187
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 GFLPWH 7
GFLP H
Sbjct: 2109 GFLPDH 2114
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 GFLPWH 7
GFLP H
Sbjct: 2109 GFLPDH 2114
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 GFLPWH 7
GFLP H
Sbjct: 2109 GFLPDH 2114
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 3 FLPWHI 8
F+PW +
Sbjct: 2 FVPWQL 7
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 GFLPWHIR 9
G++ W +R
Sbjct: 767 GYMMWELR 774
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LGFLPWHIR 9
+GFL HI+
Sbjct: 337 VGFLTHHIK 345
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LGFLPWHIR 9
+GFL HI+
Sbjct: 337 VGFLTHHIK 345
>sp|DYR_HHV8P|PUTATIVE Dihydrofolate reductase|Human herpesvirus 8 type P
Query: 5 PWHIRL 10
PW +RL
Sbjct: 128 PWPVRL 133
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 LGFLPW 6
LG+L W
Sbjct: 393 LGYLDW 398
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 LGFLPWH 7
LGFLP H
Sbjct: 22 LGFLPDH 28
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 532 LGFIMW 537
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 532 LGFIMW 537
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 532 LGFIMW 537
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 549 LGFIMW 554
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 532 LGFIMW 537
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 547 LGFIMW 552
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 LGFLPW 6
LGF+ W
Sbjct: 548 LGFIMW 553
>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 1 LGFLPWH 7
LGFLP H
Sbjct: 11 LGFLPDH 17
>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 LGFLPWH 7
LGFLP H
Sbjct: 22 LGFLPDH 28
52|Sequence|256|265|WHIRLTEIVS
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 1 WHIRLTE 7
W IRLTE
Sbjct: 180 WLIRLTE 186
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 1 WHIRLTEIVS 10
W++ LTE +S
Sbjct: 458 WNVNLTEKLS 467
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 1 WHIRLTEIVS 10
W++ LTE +S
Sbjct: 458 WNVDLTEKLS 467
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 1 WHIRLTEIVS 10
W++ LTE +S
Sbjct: 458 WNVDLTEKLS 467
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 WHIRLTEIVS 10
W + L E+V+
Sbjct: 1477 WEVTLKEVVA 1486
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 WHIRLTEIVS 10
W++ LTE +S
Sbjct: 465 WNVDLTERLS 474
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 1 WHIRLTEIVS 10
W++ LTE +S
Sbjct: 462 WNVDLTERLS 471
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 1 WHIRLTEIVS 10
W++ LTE S
Sbjct: 464 WNVNLTEKFS 473
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 WHIRLTEIVS 10
W I LTE S
Sbjct: 474 WDINLTEKFS 483
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 1 WHIRLTEIVS 10
W + LTE +S
Sbjct: 454 WEVDLTERMS 463
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 WHIRLTEIVS 10
W + LTE S
Sbjct: 446 WEVNLTEKFS 455
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 1 WHIRLTEIVS 10
W + LTE +S
Sbjct: 458 WKVDLTERLS 467
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 1 WHIRLTEIVS 10
W++ +TE +S
Sbjct: 457 WNVDMTEKLS 466
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 1 WHIRLTEIVS 10
W++ +TE +S
Sbjct: 453 WNVDMTEKLS 462
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 WHIRLTEIVS 10
W + LTE +S
Sbjct: 472 WDVDLTERLS 481
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 1 WHIRLTEIVS 10
W + LTE +S
Sbjct: 463 WDVDLTERLS 472
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 WHIRLTEIVS 10
W + LTE +S
Sbjct: 464 WDVDLTERLS 473
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 WHIRLTEIVS 10
W + LTE +S
Sbjct: 465 WDVDLTERLS 474
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 WHIRLTEIVS 10
W + LTE +S
Sbjct: 463 WDVDLTERLS 472
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 WHIRLTEIVS 10
W + LTE S
Sbjct: 446 WDVNLTERFS 455
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 2 HIRLTEI 8
H R+TE+
Sbjct: 383 HTRITEV 389
53|Sequence|261|270|TEIVSLPSHL
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 TEIVSLPSHL 10
TEI SLP++L
Sbjct: 2100 TEIASLPTYL 2109
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 TEIVSLPSHL 10
TEI SLP++L
Sbjct: 2100 TEIASLPTYL 2109
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 TEIVSLPSHL 10
TEI SLP++L
Sbjct: 2100 TEIASLPTYL 2109
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 TEIVSLPSHL 10
TEI SLP++L
Sbjct: 2100 TEIASLPTYL 2109
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 TEIVSLPSHL 10
TEI SLP++L
Sbjct: 2100 TEIASLPTYL 2109
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TEIVSLPSHL 10
TEI +PSHL
Sbjct: 2100 TEIGRVPSHL 2109
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TEIVSLPSHL 10
TEI +PSHL
Sbjct: 2100 TEIGRVPSHL 2109
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TEIVSLPSHL 10
TEI +PSHL
Sbjct: 2100 TEIGRVPSHL 2109
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TEIVSLPSHL 10
TEI +PSHL
Sbjct: 2100 TEIGRVPSHL 2109
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TEIVSLPSHL 10
TEI +PSHL
Sbjct: 2100 TEIGRVPSHL 2109
>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 VSLPSHL 10
VSLPSHL
Sbjct: 175 VSLPSHL 181
>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 VSLPSHL 10
VSLPSHL
Sbjct: 175 VSLPSHL 181
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 TEIVSLP 7
TEIV+LP
Sbjct: 159 TEIVNLP 165
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 TEIVSLP 7
TEIV+LP
Sbjct: 159 TEIVNLP 165
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 EIVSLPSHL 10
EI LP HL
Sbjct: 2103 EIGKLPQHL 2111
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 EIVSLPSHL 10
EI LP HL
Sbjct: 2102 EIGKLPQHL 2110
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 EIVSLPSHL 10
EI LP HL
Sbjct: 2103 EIGKLPQHL 2111
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 2 EIVSLPS 8
EIVS+PS
Sbjct: 62 EIVSIPS 68
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 2 EIVSLPS 8
EIVS+PS
Sbjct: 62 EIVSIPS 68
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 1 TEIVSLPSH 9
TEI ++PS
Sbjct: 157 TEITTIPSQ 165
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 5 SLPSHL 10
S+PSHL
Sbjct: 541 SIPSHL 546
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 5 SLPSH 9
SLPSH
Sbjct: 42 SLPSH 46
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 3 IVSLPSHL 10
+S+PSHL
Sbjct: 819 FLSVPSHL 826
54|Sequence|266|275|LPSHLNISYE
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 LPSHLNISYE 10
LPSHLN+ +
Sbjct: 2120 LPSHLNLRLQ 2129
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PSHLNISYE 10
PS NIS+E
Sbjct: 43 PSRYNISFE 51
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 2 PSHLNISYE 10
PS NIS+E
Sbjct: 43 PSRYNISFE 51
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 1 LPSHLNISYE 10
PSHL I E
Sbjct: 671 FPSHLKIEIE 680
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 LPSHLNISYE 10
PSHL I E
Sbjct: 671 FPSHLKIEIE 680
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 LPSHLNISYE 10
PSHL I E
Sbjct: 671 FPSHLKIEIE 680
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 1 LPSHLNISYE 10
PSHL I E
Sbjct: 671 FPSHLKIEIE 680
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 1 LPSHLNISYE 10
PSHL I E
Sbjct: 671 FPSHLKIEIE 680
>sp|NSP4_ROTGA|NON-STRUCTURAL glycoprotein 4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 LPSHLNI 7
LP+H++I
Sbjct: 181 LPAHIDI 187
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 3 SHLNISYE 10
SH NI Y+
Sbjct: 739 SHYNIGYQ 746
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 3 SHLNISYE 10
SH NI Y+
Sbjct: 763 SHYNIGYQ 770
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 3 SHLNISYE 10
SH NI Y+
Sbjct: 745 SHYNIGYQ 752
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 3 SHLNISYE 10
SH NI Y+
Sbjct: 743 SHYNIGYQ 750
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 3 SHLNISYE 10
S LN+SY+
Sbjct: 1786 SQLNMSYD 1793
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 4 HLNISYE 10
H+N SYE
Sbjct: 655 HVNNSYE 661
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 PSHLNISYE 10
PSH SYE
Sbjct: 1861 PSHTMGSYE 1869
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LPSHLNISY 9
+PS ISY
Sbjct: 819 MPSQAGISY 827
55|Sequence|271|280|NISYEDFFSA
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 NISYEDF 7
NISY DF
Sbjct: 295 NISYYDF 301
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 ISYEDFFSA 10
ISY DF+++
Sbjct: 2946 ISYNDFYAS 2954
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 2 ISYEDFF 8
+ YEDF+
Sbjct: 128 LKYEDFY 134
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 2 ISYEDFF 8
+ YEDF+
Sbjct: 128 LKYEDFY 134
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 ISYEDFFSA 10
ISY DF+++
Sbjct: 2926 ISYNDFYAS 2934
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 ISYEDFFSA 10
ISY DF+++
Sbjct: 2976 ISYNDFYAS 2984
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 ISYEDFFSA 10
ISY DF+++
Sbjct: 2926 ISYNDFYAS 2934
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 ISYEDFFSA 10
ISY DF+++
Sbjct: 2946 ISYNDFYAS 2954
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 ISYEDFFSA 10
ISY DF+++
Sbjct: 2976 ISYNDFYAS 2984
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NISYEDF 7
NISY DF
Sbjct: 295 NISYYDF 301
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 1 NISYEDF 7
NISY DF
Sbjct: 295 NISYYDF 301
>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 YEDFFS 9
YEDF++
Sbjct: 162 YEDFYT 167
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 2 ISYEDFFS 9
+S++D+FS
Sbjct: 144 LSFQDYFS 151
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ISYEDFFS 9
+S++D+FS
Sbjct: 144 LSFQDYFS 151
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 3 SYEDFFSA 10
SY D FSA
Sbjct: 161 SYYDSFSA 168
>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)
Query: 3 SYEDFFSA 10
SY D FSA
Sbjct: 161 SYYDSFSA 168
>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)
Query: 1 NISYEDFFSA 10
++SY D+F+
Sbjct: 141 DVSYNDYFNV 150
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 NISYEDFFSA 10
++SY D+F+
Sbjct: 141 DVSYNDYFNV 150
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NISYEDFFSA 10
++SY D+F+
Sbjct: 141 DVSYNDYFNV 150
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NISYEDFFSA 10
++SY D+F+
Sbjct: 141 DVSYNDYFNV 150
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 NISYEDFFS 9
N+S E FF+
Sbjct: 6600 NVSKEGFFT 6608
56|Sequence|276|285|DFFSALRQYA
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 DFFSALRQY 9
DFF A+R Y
Sbjct: 1024 DFFKAVRDY 1032
>sp|VE6_HPV34|PROTEIN E6|Human papillomavirus type 34
Query: 2 FFSALRQY 9
F+S +RQY
Sbjct: 70 FYSKVRQY 77
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 FFSALRQYA 10
FF A+RQ++
Sbjct: 104 FFQAVRQHS 112
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 DFFSALRQ 8
DFF L+Q
Sbjct: 413 DFFQKLKQ 420
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 DFFSALRQ 8
DFF L+Q
Sbjct: 412 DFFQKLKQ 419
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 DFFSALRQ 8
DFF L+Q
Sbjct: 412 DFFQKLKQ 419
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 DFFSALRQ 8
DFF L+Q
Sbjct: 413 DFFQKLKQ 420
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 DFFSALRQ 8
DFF L+Q
Sbjct: 412 DFFQKLKQ 419
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 DFFSALRQ 8
DFF L+Q
Sbjct: 412 DFFQKLKQ 419
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 DFFSALRQ 8
DFF L+Q
Sbjct: 412 DFFQRLKQ 419
>sp|VE6_HPV51|PROTEIN E6|Human papillomavirus 51
Query: 2 FFSALRQY 9
F+S +R+Y
Sbjct: 69 FYSKIREY 76
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 DFFSALRQ 8
DFF L+Q
Sbjct: 412 DFFQRLKQ 419
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 DFFSALRQ 8
D+F +RQ
Sbjct: 27 DYFEVIRQ 34
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 1 DFFSALRQ 8
DF SAL Q
Sbjct: 196 DFVSALEQ 203
>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2
Query: 1 DFFSALRQ 8
DF SAL Q
Sbjct: 196 DFVSALEQ 203
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 1 DFFSALRQY 9
DF +A R+Y
Sbjct: 89 DFLTAHRRY 97
>sp|TEG3_HHV11|TEGUMENT protein UL14|Human herpesvirus 1 (strain 17)
Query: 1 DFFSALRQY 9
DF +A R+Y
Sbjct: 89 DFLTAHRRY 97
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 DFFSALRQ 8
++FS++RQ
Sbjct: 997 NYFSSIRQ 1004
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 DFFSALRQ 8
++FS++RQ
Sbjct: 997 NYFSSIRQ 1004
57|Sequence|281|293|LRQYAACEQRLGK
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 3 QYAACEQRL 11
QY +CE+R+
Sbjct: 279 QYGSCEERV 287
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 LRQYAACEQRL 11
L QYA CE L
Sbjct: 2044 LTQYADCELHL 2054
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 2 RQYAACEQ 9
R++AAC Q
Sbjct: 87 RKFAACSQ 94
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LRQYAACEQ 9
L YA CEQ
Sbjct: 4515 LSIYAGCEQ 4523
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 1 LRQYAACEQRL 11
LR++A C++++
Sbjct: 135 LREHALCKRKM 145
>sp|TEG7_VZVO|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 RQYAACEQRL 11
R YAAC + +
Sbjct: 76 RTYAACSRNI 85
>sp|TEG7_VZVD|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 RQYAACEQRL 11
R YAAC + +
Sbjct: 76 RTYAACSRNI 85
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LRQYAACEQRLGK 13
+RQ+ QR+G+
Sbjct: 407 IRQFVNMWQRIGR 419
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 LRQYAACEQRL 11
LRQ A QRL
Sbjct: 460 LRQIQALPQRL 470
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 4 YAACEQRL 11
YAAC+ +L
Sbjct: 824 YAACKSQL 831
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 LRQYAACEQRL 11
L QYA C+ L
Sbjct: 2044 LTQYADCDLHL 2054
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 4 YAACEQ 9
YAAC Q
Sbjct: 104 YAACSQ 109
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 2 RQYAACEQ 9
R++AAC +
Sbjct: 87 RKFAACSE 94
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 RQYAACEQRLGK 13
++Y+ CEQ K
Sbjct: 523 KEYSRCEQSCPK 534
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 RQYAACEQRLGK 13
++Y+ CEQ K
Sbjct: 523 KEYSRCEQSCPK 534
>sp|VE4_HPV11|PROTEIN E4|Human papillomavirus 11
Query: 6 ACEQRLG 12
AC +RLG
Sbjct: 37 ACRRRLG 43
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 QYAACEQR 10
QYA C ++
Sbjct: 1532 QYAGCSEQ 1539
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 RQYAACEQR 10
R YA+C R
Sbjct: 412 RNYASCHIR 420
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LRQYAACEQRLG 12
+ + AAC ++LG
Sbjct: 2902 INRVAACLRKLG 2913
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 LRQYAACEQRLG 12
+ + AAC ++LG
Sbjct: 2902 INRVAACLRKLG 2913
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 LRQYAACEQRLG 12
+ + AAC ++LG
Sbjct: 2902 INRVAACLRKLG 2913
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 LRQYAACEQRLG 12
+ + AAC ++LG
Sbjct: 2902 INRVAACLRKLG 2913
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 LRQYAACEQRLG 12
+ + AAC ++LG
Sbjct: 2902 INRVAACLRKLG 2913
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LRQYAACE 8
L QY+ C+
Sbjct: 1751 LEQYSTCD 1758
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LRQYAACE 8
L QY+ C+
Sbjct: 1751 LEQYSTCD 1758
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 LRQYAACEQ 9
L YA CE+
Sbjct: 467 LHTYAVCEK 475
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 LRQYAACEQ 9
L YA CE+
Sbjct: 467 LHTYAVCEK 475
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 LRQYAACEQRLG 12
L + A+C ++LG
Sbjct: 2906 LNRVASCLRKLG 2917
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 LRQYAACEQRLG 12
L + A+C ++LG
Sbjct: 2904 LNRVASCLRKLG 2915