NGBR_HUMAN Blast Output
Archaea
1|Sequence|1|10|MTGLYELVWR

>sp|FEN_IGNH4|FLAP endonuclease 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 MTGLYELVWR 10
+T YELVWR
Sbjct: 290 VTDDYELVWR 299


>sp|AGLR_HALVD|PROBABLE flippase AglR|Haloferax volcanii (strain ATCC 29605

Query: 1 MTGLYELVWR 10
+ G+YE+ WR
Sbjct: 236 LVGIYEVAWR 245


Query: 1 MTGLYELVW 9
M+ LYE +W
Sbjct: 140 MSSLYEALW 148


>sp|FAU1_SULTO|PROBABLE ribonuclease FAU-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GLYELVWR 10
G Y +VWR
Sbjct: 127 GKYSMVWR 134


>sp|FEN_PYRFU|FLAP endonuclease 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MTGLYELVWR 10
+T Y LVWR
Sbjct: 284 VTDNYNLVWR 293


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 MTGLYELVW 9
M G +ELVW
Sbjct: 855 MPGNWELVW 863


>sp|PELO_THEGJ|PROTEIN pelota homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 2 TGLYELVWR 10
TG+YE++ R
Sbjct: 240 TGIYEVIKR 248


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 TGLYELV 8
+GLYELV
Sbjct: 252 SGLYELV 258


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 TGLYELVWR 10
TG+ +L WR
Sbjct: 208 TGMGKLTWR 216


>sp|FEN_THEON|FLAP endonuclease 1|Thermococcus onnurineus (strain NA1)

Query: 1 MTGLYELVWR 10
+T YEL WR
Sbjct: 284 VTDDYELKWR 293


>sp|FEN_THEKO|FLAP endonuclease 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 MTGLYELVWR 10
+T YEL WR
Sbjct: 284 VTDDYELKWR 293


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 MTGLYELVWR 10
+T YEL WR
Sbjct: 284 VTDDYELKWR 293


>sp|PELO_PYRFU|PROTEIN pelota homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TGLYELVWR 10
TG+YE++ R
Sbjct: 240 TGIYEVIKR 248


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TGLYELVWR 10
TG+YE++ R
Sbjct: 240 TGIYEVIKR 248


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 4 LYELVW 9
+YEL+W
Sbjct: 155 IYELIW 160


>sp|PELO_THEON|PROTEIN pelota homolog|Thermococcus onnurineus (strain NA1)

Query: 2 TGLYELVWR 10
TG+YE++ R
Sbjct: 240 TGIYEVIKR 248


>sp|RS4E_PYRIL|SMALL ribosomal subunit protein eS4|Pyrobaculum islandicum (strain DSM

Query: 4 LYELVW 9
LYE+VW
Sbjct: 194 LYEIVW 199


>sp|FEN_THEPD|FLAP endonuclease 1|Thermofilum pendens (strain DSM 2475

Query: 1 MTGLYELVWR 10
+T YEL W+
Sbjct: 289 VTDSYELTWK 298


>sp|DHYS_IGNH4|PROBABLE deoxyhypusine synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 MTGLYELVW 9
M YEL+W
Sbjct: 154 MVAPYELIW 162


>sp|RS4E_PYRAE|SMALL ribosomal subunit protein eS4|Pyrobaculum aerophilum (strain ATCC

Query: 4 LYELVW 9
LYE+VW
Sbjct: 194 LYEIVW 199


>sp|RS4E_PYRAR|SMALL ribosomal subunit protein eS4|Pyrobaculum arsenaticum (strain DSM

Query: 4 LYELVW 9
LYE+VW
Sbjct: 194 LYEIVW 199


>sp|AGL15_HALVD|PROBABLE low-salt glycan biosynthesis flippase|Haloferax volcanii (strain

Query: 3 GLYELVWR 10
G YE WR
Sbjct: 236 GAYETAWR 243


>sp|ASSY_METS5|ARGININOSUCCINATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 MTGLYELVW 9
M GLYE V+
Sbjct: 76 MNGLYEEVY 84


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 2 TGLYELV 8
TGLY+LV
Sbjct: 325 TGLYKLV 331




2|Sequence|6|15|ELVWRVLHAL

>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LVWRVLHA 9
++W+VLH+
Sbjct: 320 IIWKVLHS 327


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 2 LVWRVLHA 9
++W VLH+
Sbjct: 323 IIWEVLHS 330


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LVWRVLHA 9
++W+VLH+
Sbjct: 323 IIWQVLHS 330


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 2 LVWRVLHA 9
++W+VLH+
Sbjct: 320 IIWQVLHS 327


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LVWRVLHA 9
++W+VLH+
Sbjct: 325 IIWQVLHS 332


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LVWRVLH 8
++W VLH
Sbjct: 311 IIWEVLH 317


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LVWRVLH 8
++W VLH
Sbjct: 309 IIWEVLH 315


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 ELVWRVLHAL 10
E+ WRV+ A+
Sbjct: 23 EIEWRVIDAV 32


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ELVWRVLHAL 10
E+ WRV+ A+
Sbjct: 23 EIEWRVIDAV 32


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ELVWRVLHAL 10
E+ WRV+ A+
Sbjct: 23 EIEWRVIDAV 32


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 1 ELVWRVLHAL 10
E+ WRV+ A+
Sbjct: 23 EIEWRVIDAV 32


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 ELVWRVLHAL 10
E+ WRV+ A+
Sbjct: 23 EIEWRVIDAV 32


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 ELVWRVLHAL 10
E+ WRV+ A+
Sbjct: 23 EIEWRVIDAV 32


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain

Query: 3 VWRVLH 8
VWRV H
Sbjct: 80 VWRVAH 85




3|Sequence|11|20|VLHALLCLHR

>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LHALLCLH 9
LHA CLH
Sbjct: 341 LHAFDCLH 348


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LHALLCLH 9
LHA CLH
Sbjct: 341 LHAFDCLH 348


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LHALLCLH 9
LHA CLH
Sbjct: 341 LHAFDCLH 348


>sp|DNLI_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 LHALLCLH 9
LHA CLH
Sbjct: 382 LHAFDCLH 389


>sp|DNPH1_METAC|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Methanosarcina

Query: 5 LLCLHR 10
+LCLHR
Sbjct: 119 VLCLHR 124


>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 1 VLHALLCLH 9
+LH CLH
Sbjct: 239 MLHCFRCLH 247


>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 3 HALLCLHR 10
HA+ CL R
Sbjct: 350 HAIACLER 357


>sp|Y941_METJA|TPR repeat-containing protein MJ0941|Methanocaldococcus jannaschii

Query: 4 ALLCLHR 10
ALLCL+R
Sbjct: 184 ALLCLNR 190


>sp|RBL_METMA|RIBULOSE bisphosphate carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LHALLCLH 9
LHA C+H
Sbjct: 267 LHAHRCMH 274


>sp|RBL_METAC|RIBULOSE bisphosphate carboxylase|Methanosarcina acetivorans (strain ATCC

Query: 2 LHALLCLH 9
LHA C+H
Sbjct: 267 LHAHRCMH 274


>sp|RBL_METBF|RIBULOSE bisphosphate carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LHALLCLH 9
LHA C+H
Sbjct: 267 LHAHRCMH 274




4|Sequence|16|25|LCLHRTLTSW

>sp|HIS3_NATPD|PHOSPHORIBOSYL-AMP cyclohydrolase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 CLHRTL 7
C HRTL
Sbjct: 98 CFHRTL 103


>sp|HIS3_HALSA|PHOSPHORIBOSYL-AMP cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 2 CLHRTL 7
C HRTL
Sbjct: 108 CFHRTL 113


>sp|HIS3_HALS3|PHOSPHORIBOSYL-AMP cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 2 CLHRTL 7
C HRTL
Sbjct: 108 CFHRTL 113


>sp|Y1178_METTH|UPF0251 protein MTH_1178|Methanothermobacter thermautotrophicus (strain

Query: 3 LHRTLTS 9
HRTLTS
Sbjct: 64 FHRTLTS 70


>sp|DNPH1_METAC|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Methanosarcina

Query: 1 LCLHR 5
LCLHR
Sbjct: 120 LCLHR 124


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LHRTLTSW 10
LHR T W
Sbjct: 445 LHRLKTEW 452




5|Sequence|21|30|TLTSWLRVRF

>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 2 LTSWLRVR 9
LTSWL ++
Sbjct: 766 LTSWLNIK 773


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LTSWLRVR 9
LTSWL ++
Sbjct: 766 LTSWLNIK 773


>sp|IDI2_PYRAB|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 LTSWLRVRF 10
L S+LR RF
Sbjct: 360 LNSYLRARF 368


>sp|LIPA_PYRCJ|LIPOYL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LTSWLRVR 9
L SW+RV+
Sbjct: 3 LPSWIRVK 10


>sp|RNP3_METTH|RIBONUCLEASE P protein component 3|Methanothermobacter thermautotrophicus

Query: 4 SWLRVR 9
SWL+VR
Sbjct: 155 SWLKVR 160


>sp|Y1281_ARCFU|UNCHARACTERIZED protein AF_1281|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LTSWLRVR 9
+TSW+ +R
Sbjct: 117 MTSWIGIR 124


>sp|Y2147_ARCFU|UNCHARACTERIZED protein AF_2147|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TLTSWLRVRF 10
T+T WL +F
Sbjct: 29 TVTKWLNEQF 38




6|Sequence|26|35|LRVRFGTWNW

>sp|KDGK_THEAC|2-DEHYDRO-3-DEOXYGLUCONOKINASE acidophilum (strain ATCC 25905

Query: 4 RFGTWNW 10
RFG W W
Sbjct: 141 RFGGWGW 147


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 RFGTWN 9
R GTWN
Sbjct: 490 RLGTWN 495


>sp|AROC_HALSA|CHORISMATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 4 RFGTWNW 10
+FGT NW
Sbjct: 114 KFGTRNW 120


>sp|AROC_HALMD|CHORISMATE synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 4 RFGTWNW 10
+FGT NW
Sbjct: 114 KFGTRNW 120


>sp|AROC_HALMA|CHORISMATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 RFGTWNW 10
+FGT NW
Sbjct: 114 KFGTRNW 120


>sp|AROC_HALLT|CHORISMATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 RFGTWNW 10
+FGT NW
Sbjct: 114 KFGTRNW 120


>sp|AROC_HALWD|CHORISMATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 RFGTWNW 10
+FGT NW
Sbjct: 114 KFGTRNW 120


>sp|RS7_AERPE|SMALL ribosomal subunit protein uS7|Aeropyrum pernix (strain ATCC

Query: 5 FGTWNW 10
FG W+W
Sbjct: 24 FGKWSW 29


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 1 LRVRFGTW 8
LRV F TW
Sbjct: 223 LRVPFDTW 230


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 4 RFGTWNW 10
+ GTWN+
Sbjct: 487 KLGTWNF 493


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 3 VRFGTWNW 10
V FGT NW
Sbjct: 851 VCFGTPNW 858


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 5 FGTWNW 10
FGT NW
Sbjct: 367 FGTNNW 372


>sp|DNLI_METMP|DNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 FGTWNW 10
FGT NW
Sbjct: 367 FGTNNW 372


>sp|DNLI_METM7|DNA ligase|Methanococcus maripaludis (strain C7 /

Query: 5 FGTWNW 10
FGT NW
Sbjct: 367 FGTNNW 372


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 5 FGTWNW 10
FGT NW
Sbjct: 367 FGTNNW 372


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 4 RFGTWN 9
+ GTWN
Sbjct: 503 KLGTWN 508




7|Sequence|31|40|GTWNWIWRRC

>sp|HIS5_THEKO|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus kodakarensis

Query: 3 WNWIWRR 9
WN +W+R
Sbjct: 111 WNQVWQR 117


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC

Query: 1 GTWNWIWR 8
GTW +W+
Sbjct: 53 GTWTTLWK 60


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 GTWNWIWR 8
GTW +W+
Sbjct: 52 GTWTTLWK 59


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 1 GTWNWI 6
G+W WI
Sbjct: 58 GSWTWI 63


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GTWNWIWR 8
GTW +W+
Sbjct: 48 GTWTTLWK 55


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 3 WNWIWRRC 10
W+ W RC
Sbjct: 273 WDEYWSRC 280


>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 3 WNWIWRRC 10
WNW+ C
Sbjct: 122 WNWVTSNC 129


>sp|PGMI_PYRAE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum aerophilum

Query: 2 TWNW 5
TWNW
Sbjct: 61 TWNW 64


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 3 WNWIWRRC 10
WN W +C
Sbjct: 279 WNRQWNKC 286


>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 3 WNWIWRR 9
WNW+ R+
Sbjct: 234 WNWLNRQ 240


>sp|MTXH_METAC|PUTATIVE methyltransferase mtx subunit H|Methanosarcina acetivorans (strain

Query: 3 WNWIWRR 9
WNW+ R+
Sbjct: 234 WNWLNRQ 240


>sp|Y2656_METAC|UPF0228 protein MA_2656|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 NWIW 7
NWIW
Sbjct: 316 NWIW 319


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 WNWI 6
WNWI
Sbjct: 418 WNWI 421


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 WNWI 6
WNWI
Sbjct: 418 WNWI 421


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 WNWI 6
WNWI
Sbjct: 418 WNWI 421


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 WNWI 6
WNWI
Sbjct: 418 WNWI 421


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 WNWI 6
WNWI
Sbjct: 418 WNWI 421


>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WIWRRC 10
W WR C
Sbjct: 567 WDWRAC 572


>sp|TRET_THELN|TREHALOSE synthase|Thermococcus litoralis (strain ATCC 51850

Query: 5 WIWR 8
WIWR
Sbjct: 148 WIWR 151


>sp|TRET_PYRFU|TREHALOSE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 WIWR 8
WIWR
Sbjct: 148 WIWR 151


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 1 GTWNWI 6
G W WI
Sbjct: 58 GNWTWI 63


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 2 TWNWI 6
TW+WI
Sbjct: 344 TWHWI 348


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WNWIWRRC 10
W+W+ RC
Sbjct: 259 WSWVKDRC 266


>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GTWNWIWR 8
G W +WR
Sbjct: 194 GEWGILWR 201


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 1 GTWNWIWR 8
G W +WR
Sbjct: 194 GEWGILWR 201


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WNWIW 7
W+W W
Sbjct: 385 WDWAW 389


>sp|NOP10_DESA1|RIBOSOME biogenesis protein Nop10|Desulfurococcus amylolyticus (strain DSM

Query: 4 NWIWRRC 10
NW+ R+C
Sbjct: 2 NWLLRKC 8


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GTWNWIWR 8
G W +WR
Sbjct: 194 GEWGVLWR 201


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GTWNWIWR 8
G W +WR
Sbjct: 196 GKWGVLWR 203


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain

Query: 1 GTWNWI 6
G W WI
Sbjct: 58 GGWTWI 63


>sp|TRUD_PYRAR|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum arsenaticum (strain DSM

Query: 1 GTWNWI 6
G W WI
Sbjct: 58 GGWTWI 63


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GTWNWIWR 8
G W +WR
Sbjct: 196 GEWGILWR 203


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GTWNWI 6
G+W WI
Sbjct: 139 GSWTWI 144


>sp|Y658_METJA|UNCHARACTERIZED protein MJ0658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TWNWIWR 8
T+N+IW+
Sbjct: 41 TYNFIWQ 47


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 3 WNWIWRR 9
WNW+ ++
Sbjct: 234 WNWLNKK 240


>sp|GCH3_METS3|GTP cyclohydrolase III|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GTWNWI 6
G W W+
Sbjct: 244 GMWTWV 249


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TWNWIWR 8
TW W+ R
Sbjct: 676 TWEWLPR 682


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TWNWIWR 8
TW W+ R
Sbjct: 678 TWEWLPR 684


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GTWNWIW 7
+W W W
Sbjct: 544 ASWTWYW 550


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 TWNWIWR 8
TW W+ R
Sbjct: 676 TWEWLPR 682


>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 TWNWIW 7
TW+W W
Sbjct: 77 TWDWRW 82


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 WNWIWRR 9
WN +W+R
Sbjct: 168 WNLLWQR 174


>sp|RS7_AERPE|SMALL ribosomal subunit protein uS7|Aeropyrum pernix (strain ATCC

Query: 1 GTWNWI 6
G W+W+
Sbjct: 25 GKWSWV 30


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 GTWNWI 6
G W W+
Sbjct: 709 GDWKWV 714


Query: 1 GTWNWI 6
G W W+
Sbjct: 993 GDWKWV 998


>sp|DHSD_NATPH|SUCCINATE dehydrogenase hydrophobic membrane anchor|Natronomonas pharaonis

Query: 1 GTWNWIWRR 9
G W WI+ +
Sbjct: 22 GMWAWIFHK 30


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 1 GTWNWIWRR 9
GT+ W++ +
Sbjct: 223 GTYEWVYEK 231


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 GTWNWIWRR 9
GT+ W++ +
Sbjct: 223 GTYEWVYEK 231




8|Sequence|36|45|IWRRCCRAAS

>sp|Y1513_METJA|UNCHARACTERIZED protein MJ1513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WRRCCRAA 9
WR+ CR++
Sbjct: 276 WRKKCRSS 283


>sp|TRM56_METMJ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoculleus marisnigri

Query: 2 WRRC 5
WRRC
Sbjct: 67 WRRC 70


>sp|PYRH_PYRIL|URIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 WRRC 5
WRRC
Sbjct: 96 WRRC 99


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 WRRC 5
WRRC
Sbjct: 352 WRRC 355


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 2 WRRC 5
WRRC
Sbjct: 351 WRRC 354




9|Sequence|41|50|CRAASAAVLA

>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 CRAASAAVLA 10
CR A A+LA
Sbjct: 1039 CRVADEAILA 1048


>sp|HMGCS_SULAC|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 CRAASAAV 8
CR ASAA+
Sbjct: 112 CRGASAAL 119


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 CRAASAAV 8
CRAASA +
Sbjct: 112 CRAASAGL 119




10|Sequence|46|55|AAVLAPLGFT

>sp|GLCD1_HALTV|GLUCOSE 1-dehydrogenase 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 AAVLAPLGF 9
+A LAP+GF
Sbjct: 140 SADLAPVGF 148




11|Sequence|51|60|PLGFTLRKPP

>sp|SYS_CENSY|SERINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 GFTLRKPP 10
G+TL +PP
Sbjct: 187 GYTLVQPP 194


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PLGFTLRK 8
P GF++RK
Sbjct: 42 PFGFSIRK 49


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PLGFTLRK 8
P GF LRK
Sbjct: 38 PFGFKLRK 45


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GFTLRKPP 10
GFT+ +PP
Sbjct: 209 GFTVVEPP 216


>sp|SFSA_CALMQ|SUGAR fermentation stimulation protein homolog|Caldivirga

Query: 2 LGFTLRKP 9
LGFT+ KP
Sbjct: 2 LGFTINKP 9


>sp|SURE_METKA|5'-NUCLEOTIDASE SurE|Methanopyrus kandleri (strain AV19 /

Query: 1 PLGFTLRKP 9
PL FT+ +P
Sbjct: 186 PLAFTMYRP 194


>sp|POK_METJA|PANTOATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GFTLRKPP 10
GF +RK P
Sbjct: 137 GFVIRKTP 144


>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC

Query: 2 LGFTLRKP 9
LG+ L+KP
Sbjct: 73 LGYRLKKP 80


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 GFTLRKPP 10
GF+L PP
Sbjct: 256 GFSLEMPP 263


>sp|HFLX_HYPBU|GTPASE HflX|Hyperthermus butylicus (strain DSM 5456

Query: 2 LGFTLRKPP 10
+GF +R PP
Sbjct: 248 VGFIMRIPP 256


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 TLRKPP 10
T+RKPP
Sbjct: 277 TIRKPP 282


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 PLGFTLRK 8
P GF +RK
Sbjct: 42 PYGFAIRK 49


>sp|SURE1_PYRAE|5'-NUCLEOTIDASE SurE 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LGFTLRKP 9
LG TL KP
Sbjct: 43 LGITLHKP 50


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PLGFTLRKP 9
P+ FT+ KP
Sbjct: 281 PVDFTVEKP 289


>sp|SURE_HYPBU|5'-NUCLEOTIDASE SurE|Hyperthermus butylicus (strain DSM 5456

Query: 2 LGFTLRKP 9
LG TL KP
Sbjct: 47 LGITLHKP 54


>sp|SURE_PYRAR|5'-NUCLEOTIDASE SurE|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LGFTLRKP 9
LG TL KP
Sbjct: 43 LGITLHKP 50


>sp|POK_METHJ|PANTOATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GFTLRKPP 10
GF +RK P
Sbjct: 152 GFVIRKTP 159




12|Sequence|56|65|LRKPPAVGRN

>sp|GLCDH_HALMT|GLUCOSE 1-dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 1 LRKPPAVGRN 10
+R+PPA G N
Sbjct: 87 VRRPPASGTN 96


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RKPPAVGR 9
++PPAVG+
Sbjct: 520 KRPPAVGK 527


>sp|RL22_HALSA|LARGE ribosomal subunit protein uL22|Halobacterium salinarum (strain ATCC

Query: 2 RKPPAVGR 9
RKP A+GR
Sbjct: 126 RKPRAMGR 133


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LRKPPAVGR 9
LRK P +GR
Sbjct: 41 LRKQPGIGR 49


>sp|HIS5_ARCFU|IMIDAZOLE glycerol phosphate synthase subunit|Archaeoglobus fulgidus (strain

Query: 1 LRKPPAVGR 9
+R PP+VG+
Sbjct: 101 VRFPPSVGK 109


>sp|F16A1_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 KPPAVGRN 10
+PP VG N
Sbjct: 119 QPPTVGTN 126


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 2 RKPPAVGR 9
R PPA+G+
Sbjct: 458 RYPPALGK 465


>sp|RL22_HALMA|LARGE ribosomal subunit protein uL22|Haloarcula marismortui (strain ATCC

Query: 2 RKPPAVGR 9
RKP A+GR
Sbjct: 126 RKPRAMGR 133


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LRKPPAVGRN 10
L PP V RN
Sbjct: 268 LTDPPEVARN 277


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 3 KPPAVG 8
KPP+VG
Sbjct: 177 KPPSVG 182


>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 3 KPPAVG 8
KPPA+G
Sbjct: 243 KPPALG 248




13|Sequence|61|70|AVGRNRRHHR

>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VGRNRR 7
+GRNRR
Sbjct: 126 IGRNRR 131


>sp|YR33_THEPE|UNCHARACTERIZED 33.4 kDa protein in|Thermofilum pendens

Query: 1 AVGRNRRHH 9
A+GRNR H
Sbjct: 29 AMGRNRVRH 37




14|Sequence|66|75|RRHHRHPRGG

>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 HRHPR 8
HRHPR
Sbjct: 497 HRHPR 501


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 HRHPR 8
HRHPR
Sbjct: 513 HRHPR 517


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 HRHPR 8
HRHPR
Sbjct: 497 HRHPR 501


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 HRHPR 8
HRHPR
Sbjct: 497 HRHPR 501


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 4 HRHPR 8
HRHPR
Sbjct: 513 HRHPR 517


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 HRHPR 8
HRHPR
Sbjct: 497 HRHPR 501


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 HRHPR 8
HRHPR
Sbjct: 497 HRHPR 501


>sp|DAPB_ARCFU|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HHRHPR 8
HHRH R
Sbjct: 147 HHRHKR 152


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RRHHRHPR 8
R+H R+PR
Sbjct: 628 RKHIRYPR 635


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RRHHRHPRGG 10
R+H +PR G
Sbjct: 193 RQHEHYPRHG 202


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 1 RRHHRHPRGG 10
R+H +PR G
Sbjct: 193 RQHEHYPRHG 202


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 HPRGG 10
HPRGG
Sbjct: 368 HPRGG 372


>sp|RS4E_METST|SMALL ribosomal subunit protein eS4|Methanosphaera stadtmanae (strain

Query: 1 RRHHRHPRG 9
R++HR P G
Sbjct: 78 RKNHRFPVG 86


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RRHHRHPRGG 10
R+H +PR G
Sbjct: 193 RQHEHYPRHG 202


>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 RRHHRHPRGG 10
R+H +PR G
Sbjct: 193 RQHEHYPRHG 202


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 RRHHRHPRGG 10
R+H +PR G
Sbjct: 193 RQHEHYPRHG 202


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RRHHRHPRGG 10
R+H +PR G
Sbjct: 193 RQHEHYPRHG 202


>sp|PYRDB_PYRAB|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus abyssi (strain GE5

Query: 1 RRHHRHPRGG 10
RR HR GG
Sbjct: 30 RRAHREGAGG 39


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RRHHRHPRGG 10
R+H +PR G
Sbjct: 193 RQHEHYPRHG 202


>sp|RS4E_METMP|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 RRHHRHPRG 9
R+ ++HP G
Sbjct: 78 RKEYKHPAG 86


>sp|RS4E_META3|SMALL ribosomal subunit protein eS4|Methanococcus aeolicus (strain ATCC

Query: 1 RRHHRHPRG 9
R+ HR+P G
Sbjct: 78 RKDHRYPTG 86


>sp|RS4E_METM6|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 RRHHRHPRG 9
R+ ++HP G
Sbjct: 78 RKEYKHPAG 86


>sp|RS4E_METM7|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 RRHHRHPRG 9
R+ ++HP G
Sbjct: 78 RKEYKHPAG 86


>sp|RS4E_METM5|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 RRHHRHPRG 9
R+ ++HP G
Sbjct: 78 RKEYKHPAG 86




15|Sequence|71|80|HPRGGSCLAA

>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 2 PRGGSCL 8
PRGG CL
Sbjct: 237 PRGGMCL 243


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 2 PRGGSCL 8
PRGG CL
Sbjct: 237 PRGGMCL 243


>sp|KPTA_METBF|PROBABLE RNA 2'-phosphotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 RGGSCL 8
RGGSCL
Sbjct: 12 RGGSCL 17


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 RGGSCLAA 10
RGGS LAA
Sbjct: 188 RGGSILAA 195


>sp|KPTA_METMA|PROBABLE RNA 2'-phosphotransferase|Methanosarcina mazei (strain ATCC

Query: 3 RGGSC 7
RGGSC
Sbjct: 12 RGGSC 16


>sp|KPTA_METAC|PROBABLE RNA 2'-phosphotransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 RGGSC 7
RGGSC
Sbjct: 12 RGGSC 16


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 2 PRGGSCLAA 10
PRGG LA
Sbjct: 117 PRGGGALAG 125


>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 1 HPRGGSCLAA 10
+PRGG ++A
Sbjct: 157 YPRGGGSVSA 166




16|Sequence|76|85|SCLAAAHHRM

>sp|MCT_HALMA|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 LAAAHHR 9
LAA HHR
Sbjct: 187 LAAVHHR 193


>sp|MCT_HALHT|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula hispanica (strain ATCC 33960

Query: 3 LAAAHHR 9
LAA HHR
Sbjct: 187 LAAVHHR 193


>sp|FNO_METTH|F420-DEPENDENT NADP reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 CLAAAHHR 9
CL A+ HR
Sbjct: 165 CLVASDHR 172




17|Sequence|81|90|AHHRMRWRAD

>sp|Y605_METJA|PUTATIVE toxin MJ0605|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HRMRWRAD 10
+ +RW+AD
Sbjct: 94 YNLRWKAD 101


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 AHHRMRWRA 9
A HR WRA
Sbjct: 13 APHRALWRA 21


>sp|KAE1_SULTO|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfurisphaera tokodaii

Query: 4 RMRWRAD 10
R RWR D
Sbjct: 319 RPRWRVD 325


>sp|KAE1_SACS2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 4 RMRWRAD 10
R RWR D
Sbjct: 317 RPRWRVD 323


>sp|KAE1_SACI7|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 4 RMRWRAD 10
R RWR D
Sbjct: 317 RPRWRVD 323


>sp|KAE1_SACI6|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 4 RMRWRAD 10
R RWR D
Sbjct: 317 RPRWRVD 323


>sp|KAE1_SACI4|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 4 RMRWRAD 10
R RWR D
Sbjct: 317 RPRWRVD 323


>sp|KAE1_SACI3|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 4 RMRWRAD 10
R RWR D
Sbjct: 317 RPRWRVD 323


>sp|KAE1_SACI2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 4 RMRWRAD 10
R RWR D
Sbjct: 317 RPRWRVD 323


>sp|KAE1_SACI1|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 4 RMRWRAD 10
R RWR D
Sbjct: 317 RPRWRVD 323


>sp|RL44E_ARCFU|LARGE ribosomal subunit protein eL42|Archaeoglobus fulgidus (strain

Query: 1 AHHRMRWRA 9
AHHR WRA
Sbjct: 77 AHHRPTWRA 85


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 HHRMRWRAD 10
H++ WR D
Sbjct: 186 HYKAGWRLD 194


>sp|RL3_METAR|LARGE ribosomal subunit protein uL3|Methanocella arvoryzae (strain DSM

Query: 3 HRMRWR 8
HR+RW+
Sbjct: 244 HRIRWQ 249


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 RMRWRAD 10
++RWR D
Sbjct: 215 KLRWRVD 221


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 HRMRW 7
HR+RW
Sbjct: 181 HRVRW 185




18|Sequence|86|95|RWRADGRSLE

>sp|RRP42_THEON|EXOSOME complex component Rrp42|Thermococcus onnurineus (strain NA1)

Query: 3 RADGRSLE 10
R DGRSLE
Sbjct: 24 RVDGRSLE 31


>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RWRADGR 7
RWR++GR
Sbjct: 162 RWRSEGR 168


>sp|NAR7_HALMT|PUTATIVE respiratory nitrate reductase heme|Haloferax mediterranei (strain

Query: 2 WRADGRSLE 10
WRADG + E
Sbjct: 150 WRADGETEE 158


>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WRADGRSL 9
W+ DGR+
Sbjct: 133 WKGDGRTF 140


>sp|FAU1_SULTO|PROBABLE ribonuclease FAU-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WRADGRSL 9
WR DG++
Sbjct: 133 WRGDGKTF 140


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WRADGRSLE 10
W DG+ LE
Sbjct: 323 WETDGKRLE 331


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 WRADGRSLE 10
W DG+ LE
Sbjct: 323 WETDGKRLE 331


>sp|SYT_THEKO|THREONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RWRADGRSLE 10
R R+DGR +E
Sbjct: 581 RRRSDGRQVE 590


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 2 WRADGRSLE 10
WR GR+LE
Sbjct: 335 WREYGRALE 343


>sp|DPCKG_PYRNV|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 WRADGRSLE 10
WR RSLE
Sbjct: 22 WREPPRSLE 30


>sp|CETZ3_HALVD|TUBULIN-LIKE protein CetZ3|Haloferax volcanii (strain ATCC 29605

Query: 2 WRADGRSLE 10
WR G SLE
Sbjct: 172 WRKTGESLE 180


>sp|ACYP_PYRAR|ACYLPHOSPHATASE arsenaticum (strain DSM 13514

Query: 1 RWRADGRSLE 10
R R+DGR++E
Sbjct: 37 RNRSDGRTVE 46


>sp|Y384_ARCFU|UPF0252 protein AF_0384|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RWRADGRSLE 10
+W DG+ +E
Sbjct: 185 KWLRDGKRIE 194




19|Sequence|91|100|GRSLEKLPVH

>sp|TRPD_HALWD|ANTHRANILATE phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GRSLEKLPV 9
GR+L +LPV
Sbjct: 204 GRALTQLPV 212


>sp|Y516_AERPE|UPF0113 protein APE_0516.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 RSLEKLPVH 10
R++E+LP+H
Sbjct: 63 RAVERLPLH 71


>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GRSLEKLPVH 10
GR +KLP H
Sbjct: 21 GRDSKKLPSH 30


>sp|SELD_METJA|SELENIDE, water dikinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EKLPVH 10
EKLP+H
Sbjct: 112 EKLPIH 117


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GRSLEKLPVH 10
GRS+ PVH
Sbjct: 317 GRSVSVTPVH 326


>sp|MOAA_PYRAE|PROBABLE GTP 3',8-cyclase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GRSLEKL 7
GRSL+KL
Sbjct: 7 GRSLQKL 13


>sp|MOBA_PYRHO|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus horikoshii

Query: 3 SLEKLPVH 10
S+EKLPV
Sbjct: 167 SIEKLPVE 174


>sp|DTDA_METMA|D-AMINOACYL-TRNA deacylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SLEKLPV 9
SLEK+PV
Sbjct: 198 SLEKVPV 204


>sp|RL24_PYRAE|LARGE ribosomal subunit protein uL24|Pyrobaculum aerophilum (strain

Query: 2 RSLEKLPVH 10
RSL K P+H
Sbjct: 14 RSLYKAPLH 22


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 RSLEKLPVH 10
R++EK P H
Sbjct: 208 RNIEKAPPH 216




20|Sequence|96|105|KLPVHMGLVI

>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KLPVHM 6
KLPVHM
Sbjct: 416 KLPVHM 421


>sp|Y3997_METAC|UPF0288 protein MA_3997|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KLPVHM 6
KLPVHM
Sbjct: 416 KLPVHM 421


>sp|MER_METMA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KLPVHMG 7
K+P++MG
Sbjct: 150 KIPIYMG 156


>sp|MER_METTH|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KLPVHMG 7
K+P++MG
Sbjct: 145 KIPIYMG 151


>sp|MER_METTM|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 KLPVHMG 7
K+P++MG
Sbjct: 145 KIPIYMG 151




21|Sequence|101|110|MGLVITEVEQ

***** No hits found ******


22|Sequence|106|115|TEVEQEPSFS

>sp|HCGF_METM7|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 2 EVEQEPSFS 10
EVE++P++S
Sbjct: 28 EVEKDPNYS 36


>sp|MVHB_METTM|POLYFERREDOXIN protein MvhB|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 EVEQEPSFS 10
+V++EPSF+
Sbjct: 315 KVDEEPSFA 323


>sp|MVHB_METTH|POLYFERREDOXIN protein MvhB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 EVEQEPSFS 10
+V++EPSF+
Sbjct: 315 KVDEEPSFA 323


>sp|SPSS_METM7|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C7 /

Query: 1 TEVEQEPSF 9
TE+E+ P+F
Sbjct: 128 TEIEEYPTF 136


>sp|SPSS_METVS|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TEVEQEPSF 9
T+VE+ P+F
Sbjct: 128 TDVEEYPNF 136


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VEQEPSFS 10
VEQEP ++
Sbjct: 343 VEQEPEYT 350




23|Sequence|111|120|EPSFSDIASL

>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EPSFSDIASL 10
EPSF DI +
Sbjct: 117 EPSFEDIKRM 126




24|Sequence|116|125|DIASLVVWCM

>sp|TKSU_THEKO|TK-SUBTILISIN kodakarensis (strain ATCC BAA-918

Query: 1 DIASLVVWCM 10
D+A+ + WC+
Sbjct: 148 DLAANIAWCV 157


>sp|FLAB5_THEKO|FLAGELLIN B5|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DIASLVVW 8
DIA++++W
Sbjct: 216 DIAAIMLW 223


>sp|ACYP_HALWD|ACYLPHOSPHATASE walsbyi (strain DSM 16790

Query: 2 IASLVVWC 9
+ SL+ WC
Sbjct: 57 VDSLIEWC 64


>sp|PURQ_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanopyrus kandleri (strain AV19 /

Query: 4 SLVVWC 9
SLV WC
Sbjct: 219 SLVEWC 224




25|Sequence|121|130|VVWCMAVGIS

>sp|UPPS_PYRFU|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrococcus

Query: 1 VVWCMAVGI 9
V WC +GI
Sbjct: 71 VEWCHELGI 79


>sp|UPPS_METTH|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate

Query: 3 WCMAVGI 9
WC+ +GI
Sbjct: 64 WCVDLGI 70


>sp|UPPS_METMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 1 VVWCMAVGI 9
+ WC +G+
Sbjct: 63 IEWCYEIGV 71


>sp|UPPS_METAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 1 VVWCMAVGI 9
+ WC +G+
Sbjct: 63 IEWCYEIGV 71




26|Sequence|126|135|AVGISYISVY

>sp|TRPC_THEKO|INDOLE-3-GLYCEROL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AVGISYIS 8
AVGISYI+
Sbjct: 49 AVGISYIT 56


>sp|TRPC_PYRFU|INDOLE-3-GLYCEROL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AVGISYIS 8
AVGISYI+
Sbjct: 50 AVGISYIT 57


>sp|TRPC_PYRAB|INDOLE-3-GLYCEROL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 AVGISYIS 8
AVGISYI+
Sbjct: 50 AVGISYIT 57


>sp|Y1268_SULTO|PUTATIVE HTH-type transcriptional regulatory protein|Sulfurisphaera tokodaii

Query: 1 AVGISYISVY 10
A+G+S IS+Y
Sbjct: 140 ALGVSRISIY 149


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 VGISYISVY 10
+G+S+IS Y
Sbjct: 245 IGMSFISAY 253


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 VGISYISVY 10
+G+S+IS Y
Sbjct: 245 IGMSFISAY 253


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 2 VGISYISVY 10
+G+S+IS Y
Sbjct: 235 IGMSFISAY 243


>sp|Y1344_SULAC|PUTATIVE HTH-type transcriptional regulatory protein|Sulfolobus

Query: 2 VGISYISVY 10
+G+S ISVY
Sbjct: 146 LGVSRISVY 154


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 VGISYISVY 10
+G+S+IS Y
Sbjct: 234 IGMSFISAY 242


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 2 VGISYISVY 10
+G+S+IS Y
Sbjct: 234 IGMSFISAY 242


>sp|APGM_METPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 1 AVGISYISV 9
AVG+ YI V
Sbjct: 263 AVGLEYIPV 271


>sp|PCNA_PYRAB|DNA polymerase sliding clamp|Pyrococcus abyssi (strain GE5 /

Query: 1 AVGISYIS 8
A GISY+S
Sbjct: 198 AYGISYLS 205


>sp|Y1644_METJA|UNCHARACTERIZED protein MJ1644|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AVGISYISV 9
AVGIS++S+
Sbjct: 75 AVGISFVSL 83


>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VGISYISV 9
VG+SY+ V
Sbjct: 137 VGLSYVGV 144




27|Sequence|131|140|YISVYDHQGI

>sp|TRPE_AERPE|ANTHRANILATE synthase component 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 YISVYDHQG 9
Y+ VYDH G
Sbjct: 129 YVVVYDHAG 137


>sp|NIFH_METHJ|NITROGENASE iron protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 YISVYDHQGI 10
Y+ DHQGI
Sbjct: 269 YLPTIDHQGI 278


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 ISVYDHQGI 10
I +YD QGI
Sbjct: 437 IQLYDSQGI 445


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 ISVYDHQGI 10
+++YD QGI
Sbjct: 436 VALYDSQGI 444


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 1 YISVYDHQ 8
Y++VY+H+
Sbjct: 109 YVAVYEHE 116


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 ISVYDHQGI 10
+++YD QGI
Sbjct: 436 VALYDSQGI 444


>sp|Y178_METBF|UPF0284 protein Mbar_A0178|Methanosarcina barkeri (strain Fusaro /

Query: 2 ISVYDHQGI 10
++VYD QG+
Sbjct: 120 VAVYDVQGV 128


>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YISVYDH 7
YI++YDH
Sbjct: 25 YINIYDH 31


>sp|RFHPS_ARCFU|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ISVYDHQGI 10
++V+DH G+
Sbjct: 129 VAVFDHGGL 137


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 ISVYDH 7
IS+YDH
Sbjct: 196 ISLYDH 201


>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YISVYDHQG 9
Y YDH+G
Sbjct: 113 YGKFYDHRG 121


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YISVYDHQG 9
Y YDH+G
Sbjct: 113 YGKFYDHRG 121


>sp|GUAAA_METKA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanopyrus kandleri

Query: 2 ISVYDHQGI 10
+ + DH+GI
Sbjct: 104 VEILDHEGI 112


>sp|RL3_SULTO|LARGE ribosomal subunit protein uL3|Sulfurisphaera tokodaii (strain DSM

Query: 1 YISVYDHQG 9
Y+++Y QG
Sbjct: 335 YVNLYSQQG 343


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 ISVYDHQGI 10
+ +YD QGI
Sbjct: 450 VELYDSQGI 458




28|Sequence|136|145|DHQGIFKRNN

>sp|GUAAA_METKA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanopyrus kandleri

Query: 1 DHQGIFK 7
DH+GIF+
Sbjct: 108 DHEGIFE 114


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HQGIFK 7
H+GIFK
Sbjct: 406 HKGIFK 411


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HQGIFK 7
H+GIFK
Sbjct: 406 HKGIFK 411


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HQGIFK 7
H+GIFK
Sbjct: 406 HKGIFK 411


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 HQGIFK 7
H+GIFK
Sbjct: 406 HKGIFK 411


>sp|AATB_STAMF|A-TYPE ATP synthase subunit B|Staphylothermus marinus (strain ATCC 43588

Query: 1 DHQGIF 6
DH+G+F
Sbjct: 370 DHRGVF 375


>sp|T1S1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 3 QGIFKRNN 10
+G+F++NN
Sbjct: 325 KGLFQKNN 332


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 2 HQGIFKRNN 10
H G +KRNN
Sbjct: 239 HLGSWKRNN 247




29|Sequence|141|150|FKRNNSRLMD

***** No hits found ******


30|Sequence|146|155|SRLMDEILKQ

>sp|TRM1_THEVO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma volcanium

Query: 1 SRLMDEILKQ 10
+++MDEI+K
Sbjct: 300 AKVMDEIMKH 309


>sp|TDXH_AERPE|PEROXIREDOXIN pernix (strain ATCC 700893

Query: 2 RLMDEILK 9
RL+DEIL+
Sbjct: 149 RLVDEILR 156


>sp|PELO_METB6|PROTEIN pelota homolog|Methanoregula boonei (strain DSM 21154

Query: 2 RLMDEIL 8
RLMDE+L
Sbjct: 253 RLMDEVL 259


>sp|SYFA_PYRAR|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RLMDEILKQ 10
RL+DE+ K+
Sbjct: 19 RLLDEVAKE 27


>sp|Y1562_METJA|PUTATIVE membrane protein MJ1562|Methanocaldococcus jannaschii (strain ATCC

Query: 2 RLMDEILKQ 10
+LMDE++K+
Sbjct: 210 KLMDELMKE 218


>sp|ILVC_METTH|KETOL-ACID reductoisomerase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 4 MDEILKQ 10
MDEILK+
Sbjct: 274 MDEILKE 280


>sp|UPPS_AERPE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Aeropyrum pernix

Query: 1 SRLMDEI 7
SRL+DEI
Sbjct: 157 SRLLDEI 163


>sp|PELO_METPE|PROTEIN pelota homolog|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 RLMDEILKQ 10
++MDE+LK+
Sbjct: 253 QVMDEVLKR 261


>sp|NADE_THEKO|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RLMDEIL 8
RL+DEIL
Sbjct: 202 RLLDEIL 208


>sp|PELO_METBU|PROTEIN pelota homolog|Methanococcoides burtonii (strain DSM 6242

Query: 1 SRLMDEILKQ 10
S LMD +LK+
Sbjct: 255 SSLMDSLLKE 264




31|Sequence|151|160|EILKQQQELL

>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EILKQQQEL 9
E LK+Q+EL
Sbjct: 283 ETLKEQREL 291


>sp|FLPA_METJA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanocaldococcus jannaschii

Query: 1 EILKQQQELL 10
EI K+Q+E+L
Sbjct: 191 EIFKEQKEIL 200


>sp|RL32_PYRAB|LARGE ribosomal subunit protein eL32|Pyrococcus abyssi (strain GE5 /

Query: 1 EILKQQQEL 9
EILK+ QEL
Sbjct: 113 EILKRAQEL 121


>sp|RL7A_STAMF|LARGE ribosomal subunit protein eL8|Staphylothermus marinus (strain ATCC

Query: 1 EILKQQQEL 9
EI+KQ QEL
Sbjct: 114 EIIKQVQEL 122


>sp|SAHH_THEKO|ADENOSYLHOMOCYSTEINASE kodakarensis (strain ATCC BAA-918

Query: 2 ILKQQQELL 10
+LK++QEL+
Sbjct: 136 VLKERQELI 144


>sp|Y1714_PYRHO|UNCHARACTERIZED lipoprotein PH1714|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EILKQQQE 8
EI+KQQ+E
Sbjct: 342 EIVKQQRE 349




32|Sequence|156|165|QQELLGLDCS

>sp|RNP1_HALMA|RIBONUCLEASE P protein component 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 QQELLGLDC 9
+ EL+GLDC
Sbjct: 10 RHELVGLDC 18


>sp|ENO_METMA|ENOLASE mazei (strain ATCC BAA-159

Query: 1 QQELLGLD 8
Q+ELLGLD
Sbjct: 86 QKELLGLD 93


>sp|ENO_METBF|ENOLASE barkeri (strain Fusaro /

Query: 1 QQELLGLD 8
Q+ELLGLD
Sbjct: 86 QKELLGLD 93


>sp|ENO_METAC|ENOLASE acetivorans (strain ATCC 35395

Query: 1 QQELLGLD 8
Q+ELLGLD
Sbjct: 87 QKELLGLD 94


>sp|AROE_CALMQ|SHIKIMATE dehydrogenase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 5 LGLDCS 10
LGLDCS
Sbjct: 162 LGLDCS 167


>sp|RNP1_METKA|RIBONUCLEASE P protein component 1|Methanopyrus kandleri (strain AV19 /

Query: 1 QQELLGLDC 9
+ EL+GL+C
Sbjct: 10 RHELIGLEC 18


>sp|Y665_METJA|UNCHARACTERIZED protein MJ0665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QELLGLD 8
QELLG+D
Sbjct: 284 QELLGVD 290


>sp|AMT2_ARCFU|AMMONIUM transporter Amt2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QQELLGLD 8
++E+LGLD
Sbjct: 432 EEEMLGLD 439


>sp|AMT3_ARCFU|AMMONIUM transporter Amt3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QQELLGLDCS 10
Q+E +GLD S
Sbjct: 371 QEEYVGLDLS 380


>sp|AMT1_ARCFU|AMMONIUM transporter Amt1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QQELLGLDCS 10
Q+E +GLD S
Sbjct: 374 QEEYVGLDLS 383


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QQELLGLD 8
QQ+L+G+D
Sbjct: 274 QQDLVGID 281


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ELLGLDC 9
ELLG++C
Sbjct: 556 ELLGINC 562


>sp|TSR3_METS3|16S rRNA aminocarboxypropyltransferase|Methanobrevibacter smithii

Query: 4 LLGLDCS 10
++GLDCS
Sbjct: 64 VVGLDCS 70


>sp|ARLY_METBF|ARGININOSUCCINATE lyase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QELLGLD 8
QELLG D
Sbjct: 212 QELLGFD 218


>sp|THYX_AERPE|FLAVIN-DEPENDENT thymidylate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 ELLGLDC 9
E +GLDC
Sbjct: 116 ESIGLDC 122




33|Sequence|161|170|GLDCSKYSPE

>sp|AROC_SACI7|CHORISMATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 CSKYSP 9
CSKYSP
Sbjct: 176 CSKYSP 181


>sp|AROC_SACI6|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 CSKYSP 9
CSKYSP
Sbjct: 176 CSKYSP 181


>sp|AROC_SACI4|CHORISMATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 CSKYSP 9
CSKYSP
Sbjct: 176 CSKYSP 181


>sp|AROC_SACI3|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 CSKYSP 9
CSKYSP
Sbjct: 176 CSKYSP 181


>sp|AROC_SACI2|CHORISMATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 CSKYSP 9
CSKYSP
Sbjct: 176 CSKYSP 181


>sp|AROC_SACI1|CHORISMATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 CSKYSP 9
CSKYSP
Sbjct: 176 CSKYSP 181


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 CSKYSPE 10
CSKY+P+
Sbjct: 284 CSKYTPQ 290


>sp|AROC_SULTO|CHORISMATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 CSKYSP 9
CSKYSP
Sbjct: 176 CSKYSP 181


>sp|AROC_SACS2|CHORISMATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 CSKYSP 9
CSKYSP
Sbjct: 176 CSKYSP 181


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 CSKYSPE 10
CSKY+P+
Sbjct: 284 CSKYTPQ 290


>sp|TBP_METM7|TATA-BOX-BINDING protein|Methanococcus maripaludis (strain C7 /

Query: 2 LDCSKYSPE 10
L+C++Y PE
Sbjct: 119 LECTEYEPE 127


>sp|TBP_METVS|TATA-BOX-BINDING protein|Methanococcus vannielii (strain ATCC 35089

Query: 2 LDCSKYSPE 10
L+C++Y PE
Sbjct: 119 LECTEYEPE 127


>sp|KCY_PYRAB|CYTIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 LDCSKYSPE 10
+D SK+SPE
Sbjct: 156 IDTSKWSPE 164


>sp|THIM_PYRFU|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLDCSKYSPE 10
G+D S Y PE
Sbjct: 136 GVDSSTYDPE 145


>sp|TBP_METMP|TATA-BOX-BINDING protein|Methanococcus maripaludis (strain DSM 14266

Query: 2 LDCSKYSPE 10
L+C++Y PE
Sbjct: 119 LECTEYEPE 127


>sp|AROC_METS5|CHORISMATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 4 CSKYSP 9
CSKYSP
Sbjct: 175 CSKYSP 180


>sp|GLNA2_HALMT|GAMMA-GLUTAMYLPUTRESCINE synthetase|Haloferax mediterranei (strain ATCC 33500

Query: 1 GLDCSKYSPE 10
G+D KY PE
Sbjct: 181 GIDVKKYHPE 190


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 CSKYSPE 10
CSKY+P+
Sbjct: 283 CSKYTPK 289


>sp|TBP_METM6|TATA-BOX-BINDING protein|Methanococcus maripaludis (strain C6 /

Query: 2 LDCSKYSPE 10
L+C++Y PE
Sbjct: 119 LECTEYEPE 127


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 4 CSKYSPE 10
CS+Y+P+
Sbjct: 284 CSRYTPQ 290


>sp|Y241_ARCFU|S-ADENOSYL-L-METHIONINE-BINDING protein AF_0241|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LDCSKYSPE 10
+D KYSPE
Sbjct: 119 IDIKKYSPE 127


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 CSKYSPE 10
CS+Y+P+
Sbjct: 280 CSRYTPQ 286


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus (strain

Query: 1 GLDCSKYSPE 10
GLD +Y PE
Sbjct: 298 GLDGEEYEPE 307


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 CSKYSP 9
CSKYSP
Sbjct: 176 CSKYSP 181


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 4 CSKYSPE 10
CS+Y+P+
Sbjct: 277 CSRYTPQ 283


>sp|TBP_THEVO|TATA-BOX-BINDING protein|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GLDCSKYSPE 10
LD S+Y PE
Sbjct: 30 ALDGSEYEPE 39


>sp|TBP_THEAC|TATA-BOX-BINDING protein|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GLDCSKYSPE 10
LD S+Y PE
Sbjct: 30 ALDGSEYEPE 39


>sp|WTPC_PYRAB|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus abyssi (strain GE5 /

Query: 1 GLDCSKYSPE 10
G+D + Y PE
Sbjct: 61 GVDVTSYPPE 70


>sp|PDXS_AERPE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Aeropyrum pernix (strain ATCC

Query: 1 GLDCSKYSPE 10
G+D K SPE
Sbjct: 318 GIDIRKLSPE 327


>sp|KTHY_METVS|PROBABLE thymidylate kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LDCSKYSP 9
L CSK+ P
Sbjct: 158 LKCSKFEP 165


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 4 CSKYSP 9
CS+Y+P
Sbjct: 280 CSRYTP 285


>sp|KCY_PYRFU|CYTIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LDCSKYSPE 10
+D SK+SP+
Sbjct: 156 IDTSKWSPD 164


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 CSKYSPE 10
CS+YSP+
Sbjct: 280 CSRYSPK 286


>sp|TBPC_HALSA|TATA-BOX-BINDING protein C|Halobacterium salinarum (strain ATCC 700922

Query: 1 GLDCSKYSPE 10
GL+ ++Y PE
Sbjct: 122 GLEVTEYEPE 131


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DCSKYSPE 10
DCS +PE
Sbjct: 410 DCSSKNPE 417


>sp|TBP_META3|TATA-BOX-BINDING protein|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LDCSKYSPE 10
LD S+Y PE
Sbjct: 29 LDNSEYEPE 37


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 1 GLDCSKYSPE 10
GLD K PE
Sbjct: 202 GLDAEKARPE 211


>sp|TBP_METTH|TATA-BOX-BINDING protein|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GLDCSKYSPE 10
GL+ ++Y PE
Sbjct: 120 GLENTEYEPE 129


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 4 CSKYSPE 10
C++YSP+
Sbjct: 284 CTEYSPD 290


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 4 CSKYSPE 10
CS+Y+P+
Sbjct: 285 CSEYTPK 291


>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 3 DCSKYSPE 10
D KYSP+
Sbjct: 341 DTDKYSPD 348


>sp|FTR_METKA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 GLDCSKYSPE 10
G+DC PE
Sbjct: 55 GIDCGYVPPE 64


>sp|KAD6_METM7|PUTATIVE adenylate kinase|Methanococcus maripaludis (strain C7 /

Query: 2 LDCSKYSPE 10
+DCS+ PE
Sbjct: 142 IDCSEKDPE 150


>sp|APGM_METLZ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanocorpusculum labreanum (strain ATCC

Query: 1 GLDCSKYSPE 10
G+D SKY E
Sbjct: 131 GVDLSKYGVE 140


>sp|NIFB_METJA|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus jannaschii

Query: 3 DCSKYSPE 10
+C KY P+
Sbjct: 251 ECEKYIPQ 258




34|Sequence|166|175|KYSPEFANSN

>sp|NPD_SULTO|NAD-DEPENDENT protein deacetylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KYSPEFA 7
KYSPE A
Sbjct: 42 KYSPELA 48


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 1 KYSPEFANS 9
KY P+F N+
Sbjct: 450 KYHPQFKNA 458


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 KYSPEFAN 8
KY+PE+A+
Sbjct: 252 KYTPEYAS 259


>sp|NPD_SULAC|NAD-DEPENDENT protein deacetylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KYSPEFAN 8
KYSPE A+
Sbjct: 46 KYSPELAS 53


>sp|NPD_SACS2|NAD-DEPENDENT protein deacetylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KYSPEFAN 8
KYSPE A+
Sbjct: 42 KYSPELAS 49


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 KYSPEFAN 8
KY+P+FA+
Sbjct: 79 KYNPKFAD 86


>sp|GLNA2_HALMT|GAMMA-GLUTAMYLPUTRESCINE synthetase|Haloferax mediterranei (strain ATCC 33500

Query: 1 KYSPEFA 7
KY PEF+
Sbjct: 186 KYHPEFS 192




35|Sequence|171|180|FANSNDKDDQ

***** No hits found ******


36|Sequence|176|185|DKDDQVLNCH

>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 DKDDQVLNCH 10
DK + +L CH
Sbjct: 44 DKSNAILVCH 53


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 1 DKDDQVLNCH 10
DK + +L CH
Sbjct: 44 DKSNAILVCH 53


>sp|Y887_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 DKDDQVL 7
D DDQVL
Sbjct: 130 DPDDQVL 136


>sp|Y4020_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 DKDDQVL 7
D DDQVL
Sbjct: 129 DPDDQVL 135


>sp|PDXT_METMA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina mazei (strain

Query: 4 DQVLNC 9
D+VLNC
Sbjct: 194 DKVLNC 199


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 1 DKDDQVLNCH 10
DK++ +L CH
Sbjct: 44 DKNNVILVCH 53


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 DKDDQVLNCH 10
DK + +L CH
Sbjct: 44 DKSNVILICH 53


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DKDDQVLNCH 10
DK + +L CH
Sbjct: 63 DKSNVILICH 72


>sp|FOLD_NITMS|BIFUNCTIONAL protein FolD|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DKDDQVLNCH 10
DK+ V+ CH
Sbjct: 180 DKNATVITCH 189


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 DKDDQVLNC 9
D+D+ +L C
Sbjct: 443 DEDEAILQC 451


>sp|HIS8_META3|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DKDDQVL 7
DKDD+V+
Sbjct: 110 DKDDEVI 116


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 1 DKDDQVLNCH 10
D DD VL+C+
Sbjct: 55 DIDDVVLHCN 64




37|Sequence|181|190|VLNCHLAVKV

>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 NCHLAVK 9
NC+LAVK
Sbjct: 166 NCYLAVK 172


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 VLNCHLAV 8
V NCH A+
Sbjct: 820 VFNCHAAI 827


>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein MJ0993|Methanocaldococcus

Query: 1 VLNCH 5
+LNCH
Sbjct: 162 ILNCH 166




38|Sequence|186|195|LAVKVLSPED

>sp|HIS3_METTH|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 AVKVLSPED 10
AVKV PE+
Sbjct: 125 AVKVFDPEE 133


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 1 LAVKVLSPE 9
LAVKVL P+
Sbjct: 41 LAVKVLGPK 49


>sp|GVPF2_HALSA|GAS vesicle protein F2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LAVKVLSPED 10
L VKVL+P D
Sbjct: 116 LGVKVLAPGD 125


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 1 LAVKVLSPE 9
LAVK LSP
Sbjct: 41 LAVKALSPR 49


>sp|RS3_THEAC|SMALL ribosomal subunit protein uS3|Thermoplasma acidophilum (strain ATCC

Query: 1 LAVKVLSPE 9
+ VK+L+PE
Sbjct: 177 VTVKILNPE 185


>sp|MTMC1_METAC|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AVKVLSPE 9
A+KVL+PE
Sbjct: 75 AMKVLTPE 82


>sp|RS3_THEVO|SMALL ribosomal subunit protein uS3|Thermoplasma volcanium (strain ATCC

Query: 1 LAVKVLSPE 9
+ VK+L+PE
Sbjct: 177 VTVKILNPE 185


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 1 LAVKVLSPED 10
LAV V PED
Sbjct: 128 LAVNVQLPED 137




39|Sequence|191|200|LSPEDGKADI

>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LSPEDG 6
LSPEDG
Sbjct: 333 LSPEDG 338


>sp|ASD_ARCFU|PUTATIVE archaetidylserine decarboxylase proenzyme|Archaeoglobus fulgidus

Query: 1 LSPEDGKAD 9
+SP DG+ D
Sbjct: 54 VSPADGRID 62


>sp|AROD_METHJ|3-DEHYDROQUINATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LSPEDGKAD 9
LSPE KAD
Sbjct: 27 LSPEVTKAD 35


>sp|Y574_METTH|UNCHARACTERIZED protein MTH_574|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 SPEDGKADI 10
+PEDG DI
Sbjct: 153 NPEDGSWDI 161




40|Sequence|196|205|GKADIVRAAQ

>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 ADIVRAAQ 10
AD+VRAAQ
Sbjct: 829 ADVVRAAQ 836


>sp|Y1098_METJA|UNCHARACTERIZED protein MJ1098|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKADIVRAAQ 10
GKA +VRA Q
Sbjct: 22 GKATVVRARQ 31


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 ADIVRAA 9
ADIVRAA
Sbjct: 865 ADIVRAA 871


>sp|RL10_METAC|LARGE ribosomal subunit protein uL10|Methanosarcina acetivorans (strain

Query: 3 ADIVRAAQ 10
+DI+RAAQ
Sbjct: 216 SDIIRAAQ 223


>sp|RL10_METMA|LARGE ribosomal subunit protein uL10|Methanosarcina mazei (strain ATCC

Query: 3 ADIVRAAQ 10
+DI+RAAQ
Sbjct: 216 SDIIRAAQ 223


>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GKADIVRA 8
G ADIVRA
Sbjct: 417 GDADIVRA 424




41|Sequence|201|210|VRAAQDFCQL

>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VRAAQDFCQ 9
VRA DFC+
Sbjct: 540 VRAIGDFCR 548


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VRAAQDFCQ 9
VRA DFC+
Sbjct: 540 VRAIGDFCR 548


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VRAAQDF 7
VRAAQ+F
Sbjct: 832 VRAAQEF 838


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 5 QDFCQL 10
QDFC L
Sbjct: 65 QDFCNL 70




42|Sequence|206|215|DFCQLVAQKQ

>sp|Y3401_METJA|UNCHARACTERIZED protein MJECS01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FCQLVAQK 9
FC L+A+K
Sbjct: 76 FCGLIAEK 83


>sp|Y802_METJA|UNCHARACTERIZED protein MJ0802|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DFCQLVAQKQ 10
DF ++V QK+
Sbjct: 65 DFAEIVEQKK 74




43|Sequence|211|220|VAQKQKRPTD

>sp|RADA_IGNH4|DNA repair and recombination protein|Ignicoccus hospitalis (strain

Query: 1 VAQKQKRPT 9
VA ++KRPT
Sbjct: 4 VATEEKRPT 12




44|Sequence|216|225|KRPTDLDVDT

>sp|GPI_THEKO|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KRPTDLDVD 9
KRP LD+D
Sbjct: 4 KRPIGLDID 12


>sp|WTPA_METJA|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PTDLDVDT 10
P +LDVDT
Sbjct: 205 PKELDVDT 212


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 3 PTDLDVDT 10
P+DL +DT
Sbjct: 555 PSDLQLDT 562


>sp|DTDA_META3|D-AMINOACYL-TRNA deacylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PTDLDV 8
PTDLDV
Sbjct: 133 PTDLDV 138


>sp|EF1B_ARCFU|ELONGATION factor 1-beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PTDLDVD 9
P+D+DVD
Sbjct: 12 PSDVDVD 18


>sp|EF1B_THEVO|ELONGATION factor 1-beta|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PTDLDVDT 10
P+D DVDT
Sbjct: 12 PSDSDVDT 19


>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 1 KRPTDLD 7
KRP D+D
Sbjct: 312 KRPVDVD 318


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KRPTDLDVD 9
K+P++LD D
Sbjct: 59 KQPSELDAD 67


>sp|Y996_METJA|METALLOPROTEASE MJ0996|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PTDLDVD 9
PTD+D++
Sbjct: 112 PTDVDIE 118


>sp|HPRT_METAC|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 RPTDLDVDT 10
R D+DVDT
Sbjct: 48 RIADMDVDT 56


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 4 TDLDVDT 10
TDLD DT
Sbjct: 259 TDLDYDT 265


>sp|DAPA_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 TDLDVDT 10
TD+DVDT
Sbjct: 142 TDIDVDT 148




45|Sequence|221|230|LDVDTLASLL

>sp|TBP_METKA|TATA-BOX-BINDING protein|Methanopyrus kandleri (strain AV19 /

Query: 1 LDVDTLASLL 10
LD+DT+A +L
Sbjct: 107 LDLDTIAEVL 116


>sp|RL30_PYRIL|LARGE ribosomal subunit protein uL30|Pyrobaculum islandicum (strain DSM

Query: 1 LDVDTLASLL 10
+D DTLA +L
Sbjct: 68 IDADTLAEVL 77


>sp|RL30_PYRCJ|LARGE ribosomal subunit protein uL30|Pyrobaculum calidifontis (strain

Query: 1 LDVDTLASLL 10
+D DTLA +L
Sbjct: 69 IDADTLAEVL 78


>sp|RL30_PYRAE|LARGE ribosomal subunit protein uL30|Pyrobaculum aerophilum (strain

Query: 1 LDVDTLASLL 10
+D DTLA +L
Sbjct: 68 IDADTLAEVL 77


>sp|RL30_THEVO|LARGE ribosomal subunit protein uL30|Thermoplasma volcanium (strain

Query: 1 LDVDTLASLL 10
+DVDTL LL
Sbjct: 57 IDVDTLEVLL 66


>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LDVDTLASL 9
LD+DTL +L
Sbjct: 30 LDLDTLEAL 38




46|Sequence|226|235|LASLLSSNGC

>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 ASLLSSNGC 10
ASL++S GC
Sbjct: 139 ASLIASGGC 147


>sp|LYSY_HALMA|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 ASLLSSNGC 10
A L++S GC
Sbjct: 138 ADLIASGGC 146




47|Sequence|231|240|SSNGCPDPDL

>sp|PUR7_THEVO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 NGCPDPDL 10
NG P+PD+
Sbjct: 260 NGLPEPDI 267


>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NGCPDPDL 10
NG PDP++
Sbjct: 402 NGRPDPEM 409


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SNGCPDPDL 10
S G P+PD+
Sbjct: 259 SRGMPEPDI 267


>sp|Y279_THEVO|UPF0200 protein TV0279|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SSNGCPDPD 9
S NG PD D
Sbjct: 38 SRNGIPDDD 46


>sp|Y452_METJA|UNCHARACTERIZED protein MJ0452|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GCPDP 8
GCP+P
Sbjct: 9 GCPEP 13


>sp|UPPS_THEVO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 6 PDPDL 10
PDPDL
Sbjct: 200 PDPDL 204


>sp|UPPS_THEAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 6 PDPDL 10
PDPDL
Sbjct: 200 PDPDL 204


>sp|UPPS_PICTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Picrophilus torridus

Query: 6 PDPDL 10
PDPDL
Sbjct: 197 PDPDL 201


>sp|RS3_STAMF|SMALL ribosomal subunit protein uS3|Staphylothermus marinus (strain

Query: 6 PDPDL 10
PDPDL
Sbjct: 89 PDPDL 93


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 3 NGCPDPDL 10
NG P PDL
Sbjct: 259 NGAPFPDL 266


>sp|RRP4_IGNAA|EXOSOME complex component Rrp4|Ignisphaera aggregans (strain DSM 17230

Query: 5 CPDPDL 10
CP+P+L
Sbjct: 206 CPNPEL 211


>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 6 PDPDL 10
PDPDL
Sbjct: 270 PDPDL 274


>sp|TRUD_NATPD|PROBABLE tRNA pseudouridine synthase D|Natronomonas pharaonis (strain ATCC

Query: 2 SNGCPDPD 9
S+G PDPD
Sbjct: 314 SDGNPDPD 321


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 6 PDPDL 10
PDPDL
Sbjct: 260 PDPDL 264


>sp|KHSE_SULTO|HOMOSERINE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SSNGCPDPD 9
+S+G P PD
Sbjct: 126 ASSGSPHPD 134


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 6 PDPDL 10
PDPDL
Sbjct: 260 PDPDL 264


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 6 PDPDL 10
PDPDL
Sbjct: 260 PDPDL 264


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 6 PDPDL 10
PDPDL
Sbjct: 269 PDPDL 273


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 6 PDPDL 10
PDPDL
Sbjct: 260 PDPDL 264


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 6 PDPDL 10
PDPDL
Sbjct: 260 PDPDL 264


>sp|Y011_METJA|UNCHARACTERIZED protein MJ0011|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SSNGCPD 7
S GCPD
Sbjct: 136 SGGGCPD 142


>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 6 PDPDL 10
PDPDL
Sbjct: 249 PDPDL 253


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 6 PDPDL 10
PDPDL
Sbjct: 270 PDPDL 274


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 6 PDPDL 10
PDPDL
Sbjct: 249 PDPDL 253


>sp|RFRNP_METKA|RNA-FREE ribonuclease P|Methanopyrus kandleri (strain AV19 /

Query: 3 NGCPD 7
NGCP+
Sbjct: 69 NGCPE 73


>sp|KHSE_SACS2|HOMOSERINE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SSNGCPDPD 9
+S+G P PD
Sbjct: 130 ASSGSPHPD 138


>sp|KHSE_SACI7|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 SSNGCPDPD 9
+S+G P PD
Sbjct: 130 ASSGSPHPD 138


>sp|KHSE_SACI6|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SSNGCPDPD 9
+S+G P PD
Sbjct: 130 ASSGSPHPD 138


>sp|KHSE_SACI4|HOMOSERINE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SSNGCPDPD 9
+S+G P PD
Sbjct: 130 ASSGSPHPD 138


>sp|KHSE_SACI3|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 SSNGCPDPD 9
+S+G P PD
Sbjct: 130 ASSGSPHPD 138


>sp|KHSE_SACI2|HOMOSERINE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 SSNGCPDPD 9
+S+G P PD
Sbjct: 130 ASSGSPHPD 138


>sp|KHSE_SACI1|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 SSNGCPDPD 9
+S+G P PD
Sbjct: 130 ASSGSPHPD 138


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 6 PDPDL 10
PDPDL
Sbjct: 260 PDPDL 264


>sp|GATB_AERPE|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 6 PDPDL 10
PDPDL
Sbjct: 280 PDPDL 284


>sp|PTAS_METTE|PHOSPHATE acetyltransferase|Methanosarcina thermophila

Query: 2 SNGCPDPDL 10
S GC D D+
Sbjct: 309 SRGCSDEDI 317


>sp|AROC_AERPE|CHORISMATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 5 CPDPD 9
CPDP+
Sbjct: 186 CPDPE 190


>sp|CARA_THEAC|CARBAMOYL phosphate synthase small chain|Thermoplasma acidophilum (strain

Query: 2 SNGCPDPD 9
SNG DPD
Sbjct: 211 SNGPGDPD 218


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 6 PDPDL 10
PDPDL
Sbjct: 249 PDPDL 253


>sp|KHSE_THEVO|HOMOSERINE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SSNGCPDPD 9
+S+G P PD
Sbjct: 127 ASSGSPHPD 135


>sp|GLNA2_HALMT|GAMMA-GLUTAMYLPUTRESCINE synthetase|Haloferax mediterranei (strain ATCC 33500

Query: 5 CPDPD 9
CPDP+
Sbjct: 78 CPDPE 82




48|Sequence|236|245|PDPDLVLKFG

>sp|MEND_HALWD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PDPDLVLKFG 10
PDPD+VL+FG
Sbjct: 294 PDPDVVLRFG 303


>sp|UPPS_THEKO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermococcus

Query: 1 PDPDLVLKFG 10
PDPD+V++ G
Sbjct: 206 PDPDIVIRTG 215


>sp|UPPS_PYRFU|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrococcus furiosus

Query: 1 PDPDLVLKFG 10
PDPD+V++ G
Sbjct: 206 PDPDIVIRTG 215


>sp|UPPS_THEAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 1 PDPDLVLK 8
PDPDL+L+
Sbjct: 200 PDPDLILR 207


>sp|UPPS_PICTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Picrophilus torridus

Query: 1 PDPDLVLK 8
PDPDL+L+
Sbjct: 197 PDPDLILR 204


>sp|UPPS_THEVO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 1 PDPDLVLK 8
PDPDL+L+
Sbjct: 200 PDPDLILR 207


>sp|UPPS_PYRHO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrococcus

Query: 1 PDPDLVLKFG 10
PDPD+V++ G
Sbjct: 206 PDPDIVIRTG 215


>sp|UPPS_PYRAB|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrococcus abyssi

Query: 1 PDPDLVLKFG 10
PDPD+V++ G
Sbjct: 206 PDPDIVIRTG 215


>sp|UVRC_HALWD|UVRABC system protein C|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PDPDLVL 7
PDPDL++
Sbjct: 450 PDPDLIV 456


>sp|TRPA_METM6|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C6 /

Query: 1 PDPDLVLKF 9
P+PD LKF
Sbjct: 15 PNPDATLKF 23


>sp|TRPA_METM7|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C7 /

Query: 1 PDPDLVLKF 9
P+PD LKF
Sbjct: 15 PNPDATLKF 23


>sp|UPPS_PYRAE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrobaculum

Query: 1 PDPDLVLKFG 10
P+PD+V++ G
Sbjct: 180 PEPDVVVRTG 189


>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DPDLVLKFG 10
DPD+V++FG
Sbjct: 304 DPDVVVRFG 312


>sp|TRKA_METTH|TRK system potassium uptake protein|Methanothermobacter

Query: 1 PDPDLVLKFG 10
P PD+VL+ G
Sbjct: 186 PQPDMVLERG 195


>sp|TRPA_METMP|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain DSM 14266

Query: 1 PDPDLVLKF 9
P+PD LKF
Sbjct: 15 PNPDATLKF 23


>sp|IF2B_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 2 DPDLVLKF 9
DPD V+KF
Sbjct: 55 DPDQVIKF 62


>sp|TRPA_METM5|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C5 /

Query: 1 PDPDLVLKF 9
P+PD LKF
Sbjct: 15 PNPDATLKF 23


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 1 PDPDLVL 7
PDPDL+L
Sbjct: 445 PDPDLLL 451


>sp|UPPS_METJA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanocaldococcus

Query: 1 PDPDLVLK 8
P+PDL+++
Sbjct: 222 PNPDLIIR 229


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PDPDLVL 7
PDPDL+L
Sbjct: 457 PDPDLLL 463


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PDPDLVLKFG 10
P P+ VL+FG
Sbjct: 297 PHPEFVLRFG 306


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PDPDLVLKFG 10
P P+ VL+FG
Sbjct: 297 PHPEFVLRFG 306


>sp|SYFB_SACS2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DPDLVLKFG 10
+PD++++FG
Sbjct: 514 NPDVLIRFG 522


>sp|SYFB_SACI7|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DPDLVLKFG 10
+PD++++FG
Sbjct: 514 NPDVLIRFG 522


>sp|SYFB_SACI6|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DPDLVLKFG 10
+PD++++FG
Sbjct: 514 NPDVLIRFG 522


>sp|SYFB_SACI4|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DPDLVLKFG 10
+PD++++FG
Sbjct: 514 NPDVLIRFG 522


>sp|SYFB_SACI3|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 DPDLVLKFG 10
+PD++++FG
Sbjct: 514 NPDVLIRFG 522


>sp|SYFB_SACI2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DPDLVLKFG 10
+PD++++FG
Sbjct: 514 NPDVLIRFG 522


>sp|SYFB_SACI1|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 DPDLVLKFG 10
+PD++++FG
Sbjct: 514 NPDVLIRFG 522


>sp|PDXS_HALWD|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Haloquadratum walsbyi (strain

Query: 1 PDPDLV 6
PDPD+V
Sbjct: 70 PDPDIV 75


>sp|WECBH_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase homolog|Methanococcus maripaludis (strain DSM 14266

Query: 3 PDLVLKFG 10
PDLVL +G
Sbjct: 86 PDLVLVYG 93


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 2 DPDLVLKFG 10
+PD +L+FG
Sbjct: 107 NPDFLLEFG 115


>sp|THSA_ARCFU|THERMOSOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DPDLVLKF 9
DPD ++KF
Sbjct: 261 DPDQLMKF 268


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 3 PDLVLKFG 10
PD +L+FG
Sbjct: 108 PDFLLEFG 115


>sp|Y823_METJA|UNCHARACTERIZED ATP-binding protein MJ0823|Methanocaldococcus jannaschii (strain

Query: 1 PDPDLVLKFG 10
P+P L L FG
Sbjct: 38 PNPTLALAFG 47


>sp|SYD_THEVO|ASPARTATE--TRNA(ASP) ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DPDLVLK 8
DPDL+LK
Sbjct: 361 DPDLLLK 367


>sp|IF2B_METTP|TRANSLATION initiation factor 2 subunit|Methanothrix thermoacetophila (strain

Query: 2 DPDLVLKF 9
DPD ++KF
Sbjct: 54 DPDHLMKF 61


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 2 DPDLVLKF 9
DP LVL+F
Sbjct: 252 DPTLVLEF 259


>sp|LEU1_IGNH4|PROBABLE 2-isopropylmalate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 DPDLVLK 8
DPD+VL+
Sbjct: 353 DPDVVLR 359


>sp|CBIM_METJA|PUTATIVE cobalt transport protein CbiM|Methanocaldococcus jannaschii (strain

Query: 3 PDLVLKFG 10
PDL+LK G
Sbjct: 207 PDLLLKLG 214


>sp|BTUFA_HALSA|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 700922

Query: 2 DPDLVL 7
DPDLVL
Sbjct: 119 DPDLVL 124


>sp|BTUFA_HALS3|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 29341

Query: 2 DPDLVL 7
DPDLVL
Sbjct: 119 DPDLVL 124


>sp|NADK_SULTO|NAD kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DPDLVLKFG 10
DPD+VL G
Sbjct: 35 DPDVVLVIG 43


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 1 PDPDLV 6
P+PDLV
Sbjct: 275 PEPDLV 280


>sp|AROK_METMP|SHIKIMATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DPDLVL 7
DPDLVL
Sbjct: 114 DPDLVL 119


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DPDLVL 7
DPDLVL
Sbjct: 834 DPDLVL 839


>sp|MTAD_NATPD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DPDLVLKF 9
DPDL+ +F
Sbjct: 188 DPDLIAEF 195


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 2 DPDLVLKF 9
DPD VLK+
Sbjct: 256 DPDEVLKW 263


>sp|TRMY_METVS|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 PDPDLVLKF 9
P+P + LKF
Sbjct: 60 PNPPVALKF 68


>sp|Y213_METKA|UPF0282 protein MK0213|Methanopyrus kandleri (strain AV19 /

Query: 2 DPDLVLKFG 10
DPDLVL G
Sbjct: 202 DPDLVLISG 210


>sp|GATB_ARCFU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Archaeoglobus fulgidus (strain ATCC

Query: 1 PDPDLV 6
P+PDLV
Sbjct: 270 PEPDLV 275


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DPDLVLKF 9
DPD +L+F
Sbjct: 98 DPDEILQF 105


>sp|Y1542_METKA|UPF0173 metal-dependent hydrolase MK1542|Methanopyrus kandleri (strain

Query: 2 DPDLVL 7
DPDLVL
Sbjct: 40 DPDLVL 45


>sp|CBID_METBU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PDLVLKFG 10
P LVLK+G
Sbjct: 274 PGLVLKWG 281


>sp|Y816_METB6|UPF0173 metal-dependent hydrolase Mboo_0816|Methanoregula boonei (strain

Query: 2 DPDLVL 7
DPDLVL
Sbjct: 34 DPDLVL 39


>sp|TRMY_METMP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 PDPDLVLKF 9
P+P + LKF
Sbjct: 60 PNPPVALKF 68


>sp|CBID_METMA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PDLVLKFG 10
P LVLK+G
Sbjct: 273 PGLVLKWG 280


>sp|TRMY_METM6|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 PDPDLVLKF 9
P+P + LKF
Sbjct: 60 PNPPVALKF 68


>sp|T2MT_METTF|TYPE II restriction enzyme MthTI|Methanothermobacter

Query: 3 PDLVLKFG 10
PD++LK G
Sbjct: 74 PDMILKGG 81


>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PDPDLVLKFG 10
PD D + K G
Sbjct: 17 PDVDFITKLG 26




49|Sequence|241|250|VLKFGPVDST

>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC 43049

Query: 2 LKFGPVDST 10
+KFGP D+T
Sbjct: 213 IKFGPYDAT 221


>sp|LEUD2_PYRFU|3-ISOPROPYLMALATE dehydratase small subunit 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VLKFGPVDS 9
VLKF P+DS
Sbjct: 132 VLKFKPLDS 140


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 2 LKFGPVD 8
L+FGP+D
Sbjct: 117 LRFGPLD 123


>sp|RL13E_AERPE|LARGE ribosomal subunit protein eL13|Aeropyrum pernix (strain ATCC

Query: 1 VLKFGPVD 8
++K GPVD
Sbjct: 13 LVKLGPVD 20




50|Sequence|246|255|PVDSTLGFLP

>sp|ENGB_METMP|PROBABLE GTP-binding protein EngB|Methanococcus maripaludis (strain DSM

Query: 2 VDSTLGFLP 10
V TLGFLP
Sbjct: 183 VSETLGFLP 191


>sp|FUCA_META3|L-FUCULOSE phosphate aldolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PVDSTLGFL 9
P DS LGF+
Sbjct: 39 PTDSLLGFI 47


>sp|ACKA_METAC|ACETATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VDSTLGFLP 10
V++T+GF P
Sbjct: 224 VETTMGFTP 232


>sp|ACKA_METMA|ACETATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VDSTLGFLP 10
+++T+GF P
Sbjct: 224 IETTMGFTP 232


>sp|ACKA_METMZ|ACETATE kinase|Methanosarcina mazei (Methanosarcina frisia)

Query: 2 VDSTLGFLP 10
+++T+GF P
Sbjct: 224 IETTMGFTP 232


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC

Query: 1 PVDSTLGFLP 10
P D G+LP
Sbjct: 36 PTDPRYGYLP 45


>sp|RS13_METMA|SMALL ribosomal subunit protein uS13|Methanosarcina mazei (strain ATCC

Query: 4 STLGFLP 10
+TLG+LP
Sbjct: 65 ATLGYLP 71


>sp|RS13_METBF|SMALL ribosomal subunit protein uS13|Methanosarcina barkeri (strain

Query: 4 STLGFLP 10
+TLG+LP
Sbjct: 65 ATLGYLP 71


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PVDSTLGF 8
PVD +GF
Sbjct: 669 PVDEMIGF 676


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 PVDSTLGF 8
PVD +GF
Sbjct: 668 PVDEMIGF 675


>sp|RS19_STAMF|SMALL ribosomal subunit protein uS19|Staphylothermus marinus (strain

Query: 1 PVDSTLGFLP 10
P+D +G LP
Sbjct: 28 PMDEFIGLLP 37


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PVDSTLGF 8
PVD +GF
Sbjct: 668 PVDEMIGF 675


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 1 PVDSTLGF 8
PVD +GF
Sbjct: 668 PVDEMIGF 675


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 1 PVDSTLGFLP 10
P+D T+ F P
Sbjct: 141 PIDITIDFKP 150


>sp|DTDA_SULTO|D-AMINOACYL-TRNA deacylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PVDSTLGFLP 10
P+D T+G P
Sbjct: 65 PIDKTMGGEP 74


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 PVDSTLGF 8
PVD +GF
Sbjct: 669 PVDEMIGF 676


>sp|RS7_METB6|SMALL ribosomal subunit protein uS7|Methanoregula boonei (strain DSM

Query: 2 VDSTLGFL 9
VDS +GF+
Sbjct: 147 VDSAIGFI 154


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PVDSTLG 7
PVDSTL
Sbjct: 728 PVDSTLA 734




51|Sequence|251|260|LGFLPWHIRL

>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 3 FLPWH 7
FLPWH
Sbjct: 213 FLPWH 217


>sp|UPPS_HALMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Haloarcula

Query: 3 FLPWH 7
FLPWH
Sbjct: 213 FLPWH 217


>sp|CAS3_METTH|CRISPR-ASSOCIATED nuclease/helicase Cas3|Methanothermobacter thermautotrophicus

Query: 1 LGFLPWHIRL 10
+G PW IRL
Sbjct: 276 IGGAPWQIRL 285


>sp|RIFK_METST|RIBOFLAVIN kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LGFLPWH 7
LGF+P+H
Sbjct: 32 LGFIPYH 38


>sp|TRM1_PYRNV|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum neutrophilum

Query: 5 PWHIRL 10
PWH RL
Sbjct: 296 PWHYRL 301


>sp|ACDE1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Archaeoglobus

Query: 1 LGFLPWHI 8
LGFLP+++
Sbjct: 126 LGFLPYYL 133


>sp|PRIS_HALMA|DNA primase small subunit PriS|Haloarcula marismortui (strain ATCC

Query: 2 GFLPW 6
GF+PW
Sbjct: 34 GFIPW 38


>sp|DAPAL_PYRAB|UNCHARACTERIZED DapA-like lyase PYRAB12600|Pyrococcus abyssi (strain GE5 /

Query: 4 LPWHIRL 10
L WHIR
Sbjct: 23 LEWHIRF 29


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 2 GFLPW 6
GF+PW
Sbjct: 57 GFVPW 61


Query: 2 GFLPWHI 8
GF+P HI
Sbjct: 582 GFIPVHI 588


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 1 LGFLPWHI 8
L +LPW I
Sbjct: 46 LSYLPWPI 53


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 LGFLPWHIRL 10
LGF W I L
Sbjct: 485 LGFSDWEIEL 494


>sp|RL24_CALMQ|LARGE ribosomal subunit protein uL24|Caldivirga maquilingensis (strain

Query: 5 PWHIR 9
PWH R
Sbjct: 21 PWHAR 25


>sp|Y1398_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1398|Methanocaldococcus

Query: 4 LPWHIRL 10
L WH+R+
Sbjct: 284 LTWHLRI 290


>sp|PDAD_THEAC|PYRUVOYL-DEPENDENT arginine decarboxylase|Thermoplasma acidophilum (strain ATCC

Query: 2 GFLPWHI 8
GF+P HI
Sbjct: 3 GFVPTHI 9


>sp|GCK_SULTO|GLYCERATE 2-kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LGFLPW 6
LGFL W
Sbjct: 317 LGFLKW 322


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGFLPWHIRL 10
+G L W IR+
Sbjct: 18 VGVLDWDIRM 27


>sp|TFE_METMJ|TRANSCRIPTION factor E|Methanoculleus marisnigri (strain ATCC 35101

Query: 6 WHIRL 10
WH+RL
Sbjct: 84 WHLRL 88


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 GFLPWHIRL 10
GFL W + L
Sbjct: 72 GFLDWRVGL 80


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 FLPWHIR 9
FLP H+R
Sbjct: 478 FLPGHVR 484


>sp|UPPS_SULTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Sulfurisphaera

Query: 3 FLPWHI 8
FL WHI
Sbjct: 221 FLLWHI 226




52|Sequence|256|265|WHIRLTEIVS

>sp|Y896_ARCFU|UNCHARACTERIZED protein AF_0896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WHIRLTE 7
W I+LTE
Sbjct: 270 WSIKLTE 276


>sp|NADK_METST|NAD kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 WHIRLTEIV 9
WH L E+V
Sbjct: 130 WHTVLNELV 138


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 1 WHIRLTEIVS 10
W+++LT I +
Sbjct: 192 WYLKLTAIAN 201


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 1 WHIRLTEIVS 10
W+++LT I +
Sbjct: 191 WYLKLTAIAN 200


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WHIRLTEIVS 10
W+++LT I +
Sbjct: 191 WYLKLTAIAN 200


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 1 WHIRLTEIVS 10
W+++LT I +
Sbjct: 194 WYLKLTAIAN 203




53|Sequence|261|270|TEIVSLPSHL

>sp|RL21_METBF|LARGE ribosomal subunit protein eL21|Methanosarcina barkeri (strain

Query: 2 EIVSLPSHL 10
E++SLP HL
Sbjct: 84 EVISLPQHL 92


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EIVSLPSHL 10
EIVSLPS L
Sbjct: 342 EIVSLPSDL 350


>sp|RL21_METAC|LARGE ribosomal subunit protein eL21|Methanosarcina acetivorans (strain

Query: 2 EIVSLPSHL 10
E+ SLP HL
Sbjct: 84 EVFSLPQHL 92


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 3 IVSLPSH 9
+VSLPSH
Sbjct: 64 VVSLPSH 70


>sp|RL21_METMA|LARGE ribosomal subunit protein eL21|Methanosarcina mazei (strain ATCC

Query: 2 EIVSLPSHL 10
E+ S+P HL
Sbjct: 84 EVFSVPQHL 92


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EIVSLPSHL 10
E+V+LPS L
Sbjct: 342 EVVNLPSSL 350


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EIVSLPSH 9
EI+ LP+H
Sbjct: 488 EIIELPAH 495


>sp|RTCA_SACS2|RNA 3'-terminal phosphate cyclase|Saccharolobus solfataricus (strain

Query: 1 TEIVSLPSHL 10
+ + SLPSH+
Sbjct: 190 SHVSSLPSHI 199


>sp|G3P_NATPD|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 VSLPSH 9
VSLPSH
Sbjct: 189 VSLPSH 194


>sp|RL21_META3|LARGE ribosomal subunit protein eL21|Methanococcus aeolicus (strain

Query: 2 EIVSLPSHL 10
EI++ P HL
Sbjct: 84 EIIARPQHL 92


>sp|RL21_METBU|LARGE ribosomal subunit protein eL21|Methanococcoides burtonii (strain

Query: 2 EIVSLPSHL 10
E++SL HL
Sbjct: 84 EVISLSQHL 92


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EIVSLPSH 9
EI+ LP H
Sbjct: 488 EIIELPGH 495


>sp|TSR3_METBF|16S rRNA aminocarboxypropyltransferase|Methanosarcina barkeri (strain

Query: 1 TEIVSLPSH 9
TEIV + SH
Sbjct: 163 TEIVEIQSH 171


>sp|TSR3_METMA|16S rRNA aminocarboxypropyltransferase|Methanosarcina mazei (strain

Query: 1 TEIVSLPSH 9
TEIV + SH
Sbjct: 163 TEIVEIQSH 171




54|Sequence|266|275|LPSHLNISYE

>sp|RPO10_STAMF|DNA-DIRECTED RNA polymerase subunit Rpo10|Staphylothermus marinus (strain ATCC

Query: 3 SHLNISYE 10
SH+ ISYE
Sbjct: 51 SHIEISYE 58


>sp|FTSZ2_PYRHO|CELL division protein FtsZ 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LPSHLNISY 9
LPS +NI Y
Sbjct: 232 LPSMVNIDY 240


>sp|FTSZ2_PYRAB|CELL division protein FtsZ 2|Pyrococcus abyssi (strain GE5 /

Query: 1 LPSHLNISY 9
LPS +NI Y
Sbjct: 232 LPSMVNIDY 240


>sp|KUP_METHJ|PROBABLE potassium transport system protein|Methanospirillum hungatei JF-1

Query: 3 SHLNISY 9
SHL+ISY
Sbjct: 536 SHLSISY 542


>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPSHLNISYE 10
LP + NIS+E
Sbjct: 244 LPKYENISWE 253


>sp|KPTA_PYRFU|PROBABLE RNA 2'-phosphotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 HLNISYE 10
HL++SYE
Sbjct: 124 HLSLSYE 130


>sp|AROC_METVS|CHORISMATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PSHLNISYE 10
P H ++SY+
Sbjct: 103 PGHADLSYQ 111


>sp|KPTA_PYRHO|PROBABLE RNA 2'-phosphotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 HLNISYE 10
HL+I+YE
Sbjct: 119 HLSINYE 125


>sp|Y3524_METJA|UNCHARACTERIZED protein MJECL24|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPSHLNIS 8
+PSHL +S
Sbjct: 89 IPSHLQLS 96




55|Sequence|271|280|NISYEDFFSA

>sp|AATC_THEVO|A-TYPE ATP synthase subunit C|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NISYEDFFSA 10
NISYE FFS
Sbjct: 232 NISYERFFSG 241


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 1 NISYEDFFS 9
N+S+EDF S
Sbjct: 456 NLSFEDFMS 464


>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 NISYEDFFSA 10
NI++ED FS
Sbjct: 84 NINFEDIFSG 93


>sp|AROA_METMA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NISYEDFF 8
+ISY DFF
Sbjct: 407 SISYPDFF 414


>sp|AROA_METAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 ISYEDFF 8
ISY DFF
Sbjct: 408 ISYPDFF 414


>sp|GATA_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanothermobacter thermautotrophicus

Query: 2 ISYEDFFSA 10
I+Y +FFSA
Sbjct: 306 INYVEFFSA 314


>sp|PUR7_SULAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 SYEDFFS 9
+YEDFF+
Sbjct: 225 AYEDFFN 231


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 2 ISYEDFFSA 10
I+Y +FFSA
Sbjct: 282 INYVEFFSA 290


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 2 ISYEDFFSA 10
I+Y +FFSA
Sbjct: 282 INYVEFFSA 290


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 2 ISYEDFFSA 10
I+Y +FFSA
Sbjct: 282 INYVEFFSA 290


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 2 ISYEDFFSA 10
I+Y +FFSA
Sbjct: 282 INYVEFFSA 290


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 NISYEDFFSA 10
NI+ ED FS
Sbjct: 156 NINLEDLFSG 165


>sp|GATA_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 2 ISYEDFFSA 10
I+Y +FFSA
Sbjct: 307 INYVEFFSA 315




56|Sequence|276|285|DFFSALRQYA

>sp|GATA_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanothermobacter thermautotrophicus

Query: 1 DFFSALRQY 9
+FFSA R+Y
Sbjct: 310 EFFSATRKY 318


>sp|GATA_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 1 DFFSALRQY 9
+FFSA R+Y
Sbjct: 311 EFFSATRKY 319


>sp|GATA_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 1 DFFSALRQY 9
+FFSA R+Y
Sbjct: 311 EFFSATRKY 319


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 DFFSALRQY 9
+FFSA R+Y
Sbjct: 286 EFFSATRKY 294


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 DFFSALRQY 9
+FFSA R+Y
Sbjct: 286 EFFSATRKY 294


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 DFFSALRQY 9
+FFSA R+Y
Sbjct: 286 EFFSATRKY 294


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 DFFSALRQY 9
+FFSA R+Y
Sbjct: 286 EFFSATRKY 294


>sp|GATA_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus vannielii (strain ATCC

Query: 1 DFFSALRQY 9
+F+SA R+Y
Sbjct: 286 EFYSATRKY 294


>sp|GATA_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 1 DFFSALRQY 9
+FFS+ R+Y
Sbjct: 288 EFFSSTRRY 296


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DFFSALRQY 9
DF+ A RQY
Sbjct: 379 DFYKAHRQY 387


>sp|Y543_METHJ|UPF0316 protein Mhun_0543|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DFFSALRQYA 10
DF + LRQY
Sbjct: 112 DFIARLRQYG 121


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DFFSALRQY 9
+ SALRQY
Sbjct: 223 EVISALRQY 231


>sp|PFDA_SULAC|PREFOLDIN subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DFFSALRQY 9
D SALRQY
Sbjct: 19 DQASALRQY 27


>sp|DHYS_HALSA|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC

Query: 1 DFFSALRQYA 10
DFF L YA
Sbjct: 36 DFFELLDSYA 45


>sp|DHYS_HALS3|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DFFSALRQYA 10
DFF L YA
Sbjct: 36 DFFELLDSYA 45




57|Sequence|281|293|LRQYAACEQRLGK

>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 1 LRQYAACEQRLGK 13
LR+Y C++ LG+
Sbjct: 11 LRKYCLCDRCLGR 23


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 1 LRQYAACEQR 10
R Y ACE+R
Sbjct: 244 FRTYDACERR 253


>sp|PUS10_VULDI|TRNA pseudouridine synthase Pus10|Vulcanisaeta distributa (strain DSM

Query: 1 LRQYAACEQRLGK 13
LR+Y C LG+
Sbjct: 10 LRKYPLCNHCLGR 22


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 QYAACEQRLG 12
+YAAC Q+
Sbjct: 285 RYAACHQQFA 294


>sp|DHAS_ARCFU|ASPARTATE-SEMIALDEHYDE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LRQYAACEQRLGK 13
L AA E+R+GK
Sbjct: 30 LTSLAASERRVGK 42


>sp|TSR3_HALSA|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum (strain

Query: 1 LRQYAACE 8
LR+YA CE
Sbjct: 140 LRRYADCE 147


>sp|TSR3_HALS3|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum (strain

Query: 1 LRQYAACE 8
LR+YA CE
Sbjct: 140 LRRYADCE 147


>sp|DPO4_HALSA|DNA polymerase IV|Halobacterium salinarum (strain ATCC 700922

Query: 4 YAACEQR 10
YA+CE+R
Sbjct: 27 YASCERR 33


>sp|DPO4_HALS3|DNA polymerase IV|Halobacterium salinarum (strain ATCC 29341

Query: 4 YAACEQR 10
YA+CE+R
Sbjct: 27 YASCERR 33


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 4 YAACEQRLGK 13
+A E+RLGK
Sbjct: 113 HAVIEKRLGK 122


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 4 YAACEQRLGK 13
+A E+RLGK
Sbjct: 113 HAVIEKRLGK 122


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 QYAACEQRL 11
+YAAC Q+
Sbjct: 287 RYAACHQQF 295


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain

Query: 1 LRQYAACEQRLGK 13
L++Y C+ LG+
Sbjct: 15 LKKYDLCDHCLGR 27


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 QYAACEQRLG 12
+YAAC Q+
Sbjct: 282 RYAACHQQFA 291






THE END