1|SequenceR|10|1|RARLAASFFM
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 RARLAASFFM 10
RAR A+ FM
Sbjct: 1789 RARECATIFM 1798
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 RLAASFF 9
RLAA FF
Sbjct: 1294 RLAAMFF 1300
>sp|YVFE_VACCC|UNCHARACTERIZED 7.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 RLAASFFM 10
RLA+ FF+
Sbjct: 52 RLASDFFI 59
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 1 RARLAASFF 9
R+R+ SFF
Sbjct: 447 RSRMLISFF 455
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 1 RARLAASFF 9
R+R+ SFF
Sbjct: 467 RSRMLISFF 475
2|SequenceR|15|6|TLGAARARLA
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 TLGAARARLA 10
T GAA AR++
Sbjct: 762 TYGAAPARIS 771
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 TLGAARARLA 10
T GAA AR++
Sbjct: 762 TYGAAPARIS 771
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 TLGAARAR 8
TLG RAR
Sbjct: 259 TLGTIRAR 266
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 TLGAARAR 8
TLG RAR
Sbjct: 259 TLGTIRAR 266
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 1 TLGAARAR 8
TLG RAR
Sbjct: 259 TLGTIRAR 266
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 1 TLGAARAR 8
TLG RAR
Sbjct: 259 TLGTIRAR 266
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 1 TLGAARAR 8
TLG RAR
Sbjct: 259 TLGTIRAR 266
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 TLGAARAR 8
TLG RAR
Sbjct: 259 TLGTIRAR 266
3|SequenceR|20|11|RGWHATLGAA
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 1 RGWHAT 6
RGWH T
Sbjct: 240 RGWHTT 245
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 1 RGWHAT 6
RGWH T
Sbjct: 240 RGWHTT 245
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 1 RGWHAT 6
RGWH T
Sbjct: 226 RGWHTT 231
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 RGWHAT 6
RGWH T
Sbjct: 244 RGWHTT 249
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 RGWHAT 6
RGWH T
Sbjct: 245 RGWHTT 250
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 1 RGWHAT 6
RGWH T
Sbjct: 245 RGWHTT 250
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 RGWHAT 6
RGWH T
Sbjct: 245 RGWHTT 250
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1547 WHVTQGAA 1554
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GWHATLGA 9
GWHA GA
Sbjct: 1110 GWHAPQGA 1117
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GWHATLGA 9
GWHA GA
Sbjct: 1110 GWHAPPGA 1117
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1547 WHVTQGAA 1554
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1553 WHVTRGAA 1560
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1548 WHVTKGAA 1555
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1542 WHVTRGAA 1549
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1542 WHVTRGAA 1549
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1542 WHVTRGAA 1549
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1542 WHVTRGAA 1549
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1555 WHTTKGAA 1562
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1542 WHVTRGAA 1549
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1555 WHTTKGAA 1562
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1544 WHVTRGAA 1551
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1542 WHVTRGAA 1549
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1544 WHVTRGAA 1551
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1553 WHTTRGAA 1560
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1542 WHVTRGAA 1549
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1542 WHVTRGAA 1549
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1551 WHTTKGAA 1558
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1553 WHTTRGAA 1560
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1554 WHTTRGAA 1561
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1554 WHTTRGAA 1561
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1554 WHTTRGAA 1561
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 WHATLGAA 10
WH T GAA
Sbjct: 1554 WHTTRGAA 1561
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GWHATL 7
GWHA +
Sbjct: 207 GWHARI 212
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 GWHATLGA 9
GW A LGA
Sbjct: 1115 GWPAPLGA 1122
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 1 RGWHATLGAA 10
R WH T+ AA
Sbjct: 276 RQWHTTVHAA 285
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 1 RGWHATLGAA 10
R WH T+ AA
Sbjct: 276 RQWHTTVHAA 285
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 2 GWHAT 6
GWH T
Sbjct: 489 GWHNT 493
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 WHATL 7
WH TL
Sbjct: 98 WHGTL 102
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 WHATLGAA 10
WH T G+A
Sbjct: 1552 WHVTKGSA 1559
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 WHATLGAA 10
WH T G+A
Sbjct: 1552 WHVTKGSA 1559
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 GWHATLG 8
G HAT+G
Sbjct: 315 GHHATVG 321
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 3 WHATLGAA 10
W++ +GAA
Sbjct: 188 WNSEVGAA 195
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 4 HATLGA 9
H TLGA
Sbjct: 366 HTTLGA 371
4|SequenceR|25|16|LNRVHRGWHA
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 LNRVHRGWHA 10
L ++HRG+H
Sbjct: 1058 LQKIHRGYHG 1067
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 LNRVHRG 7
LNR HRG
Sbjct: 805 LNRQHRG 811
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LNRVHRG 7
LNR HRG
Sbjct: 805 LNRQHRG 811
>sp|UL136_HCMVT|PROTEIN UL136|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 LNRVHRGW 8
L+R+HR W
Sbjct: 27 LSRIHRFW 34
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HRGWHA 10
HRGW A
Sbjct: 786 HRGWEA 791
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 5 HRGW 8
HRGW
Sbjct: 1781 HRGW 1784
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LNRVHRGWHA 10
L+R+HR W
Sbjct: 27 LSRIHRFWEC 36
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 5 HRGWH 9
+RGWH
Sbjct: 778 NRGWH 782
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 RVHRGWH 9
R H GW+
Sbjct: 42 RRHSGWY 48
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 3 RVHRGWH 9
R H GW+
Sbjct: 39 RRHSGWY 45
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 2 NRVHRG 7
NRVH G
Sbjct: 275 NRVHTG 280
>sp|NP04_HHV11|NUCLEAR protein UL4|Human herpesvirus 1 (strain 17)
Query: 3 RVHRGWHA 10
++ RGW A
Sbjct: 88 KLERGWDA 95
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 NRVHRGW 8
NRV GW
Sbjct: 421 NRVLTGW 427
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 NRVHRGW 8
NRV GW
Sbjct: 421 NRVLTGW 427
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 NRVHRGW 8
NRV GW
Sbjct: 421 NRVLTGW 427
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 NRVHRGW 8
NRV GW
Sbjct: 421 NRVLTGW 427
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 NRVHRGW 8
NRV GW
Sbjct: 421 NRVLTGW 427
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 2 NRVHRGW 8
N+V+ GW
Sbjct: 572 NKVNVGW 578
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 NRVHRGW 8
NRV GW
Sbjct: 421 NRVLTGW 427
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NRVHRGW 8
N+V+ GW
Sbjct: 572 NKVNVGW 578
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 3 RVHRGW 8
+VHR W
Sbjct: 214 QVHRDW 219
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 3 RVHRGW 8
+VHR W
Sbjct: 214 QVHRDW 219
>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 NRVHRGWH 9
N H GW+
Sbjct: 219 NNWHAGWN 226
>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 NRVHRGWH 9
N H GW+
Sbjct: 219 NNWHAGWN 226
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 3 RVHRGW 8
+VHR W
Sbjct: 214 QVHRDW 219
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 3 RVHRGW 8
+VHR W
Sbjct: 214 QVHRDW 219
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 NRVHRGWHA 10
NR + WH+
Sbjct: 277 NRTYMYWHS 285
5|SequenceR|30|21|MVTKHLNRVH
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 MVTKHLNRVH 10
++TK + RVH
Sbjct: 1641 IITKEVQRVH 1650
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 MVTKHLNRVH 10
++TK + RVH
Sbjct: 1632 IITKEVQRVH 1641
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 MVTKHLNRVH 10
++TK + RVH
Sbjct: 1633 IITKEVQRVH 1642
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VTKHLNRV 9
V +HLNR+
Sbjct: 172 VVEHLNRM 179
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 2 VTKHLNRV 9
V +HLNR+
Sbjct: 172 VVEHLNRM 179
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 2 VTKHLNRV 9
V +HLNR+
Sbjct: 172 VVEHLNRM 179
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 VTKHLNR 8
V +HLNR
Sbjct: 1491 VERHLNR 1497
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 VTKHLNR 8
V +HLNR
Sbjct: 1491 VERHLNR 1497
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 VTKHLNR 8
V +HLNR
Sbjct: 1491 VERHLNR 1497
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 VTKHLNR 8
V +HLNR
Sbjct: 1491 VERHLNR 1497
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 VTKHLNR 8
V +HLNR
Sbjct: 1491 VERHLNR 1497
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 MVTKHLNRV 9
+VT+ LNRV
Sbjct: 2156 IVTRCLNRV 2164
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 MVTKHLNRV 9
+VT+ LNRV
Sbjct: 2156 IVTRCLNRV 2164
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 KHLNRVH 10
KH+++VH
Sbjct: 791 KHIHKVH 797
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 VTKHLN 7
VTKH N
Sbjct: 334 VTKHFN 339
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 2 VTKHLNRV 9
V KHLN++
Sbjct: 40 VQKHLNKL 47
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 2 VTKHLNRV 9
V KHLN++
Sbjct: 40 VQKHLNKL 47
>sp|VPX_HV2EH|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 4 KHLNRV 9
+HLNRV
Sbjct: 29 EHLNRV 34
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 MVTKHLNR 8
+ T HLNR
Sbjct: 162 VTTHHLNR 169
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 MVTKHLNR 8
+ T HLNR
Sbjct: 162 VTTHHLNR 169
6|SequenceR|35|26|GAGNQMVTKH
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 4 NQMVTKH 10
NQ+ TKH
Sbjct: 494 NQLCTKH 500
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 1 GAGNQMVT 8
G+GN++VT
Sbjct: 205 GSGNKLVT 212
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 GAGNQMVT 8
G+GN++VT
Sbjct: 205 GSGNKLVT 212
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GAGNQMVTKH 10
AG++ V KH
Sbjct: 475 AAGSEAVYKH 484
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GAGNQMVTKH 10
G GN +T H
Sbjct: 660 GVGNSALTLH 669
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GAGNQMVTKH 10
G GN +T H
Sbjct: 660 GVGNSALTLH 669
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 GAGNQMVTKH 10
G G++ +T H
Sbjct: 676 GVGDKKITHH 685
7|SequenceR|40|31|VFLAGGAGNQ
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 LAGGAGN 9
LAGG GN
Sbjct: 286 LAGGTGN 292
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 LAGGAGNQ 10
+AGG GN+
Sbjct: 204 IAGGTGNE 211
>sp|U18_HHV6Z|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 2 FLAGGA 7
FLAGGA
Sbjct: 264 FLAGGA 269
>sp|U18_HHV6U|PUTATIVE immediate early glycoprotein|Human herpesvirus 6A (strain
Query: 2 FLAGGA 7
FLAGGA
Sbjct: 264 FLAGGA 269
>sp|U18_HHV6H|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 2 FLAGGA 7
FLAGGA
Sbjct: 264 FLAGGA 269
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 LAGGAGNQ 10
+AGG GN+
Sbjct: 204 IAGGDGNE 211
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VFLAGGAGNQ 10
VFL GG G +
Sbjct: 192 VFLLGGHGRR 201
>sp|IR01_HCMVA|UNCHARACTERIZED protein HKLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VFLAGGAGNQ 10
VFL GG G +
Sbjct: 192 VFLLGGHGRR 201
>sp|US28_HCMVT|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain
Query: 1 VFLAGGAGN 9
VFL G GN
Sbjct: 43 VFLFGSIGN 51
>sp|US28_HCMVM|ENVELOPE protein US28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VFLAGGAGN 9
VFL G GN
Sbjct: 43 VFLFGSIGN 51
>sp|US28_HCMVA|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain
Query: 1 VFLAGGAGN 9
VFL G GN
Sbjct: 43 VFLFGSIGN 51
>sp|VP6_ROTHG|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 1 VFLAGGAGNQ 10
+F GG G Q
Sbjct: 45 IFHTGGIGTQ 54
>sp|VP6_ROTHF|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate
Query: 1 VFLAGGAGNQ 10
+F GG G Q
Sbjct: 45 IFHTGGIGTQ 54
>sp|VP6_ROTHC|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 1 VFLAGGAGNQ 10
+F GG G Q
Sbjct: 45 IFHTGGIGTQ 54
>sp|VP22_VZVO|TEGUMENT protein VP22|Varicella-zoster virus (strain Oka vaccine)
Query: 3 LAGGAGNQ 10
L GG GN+
Sbjct: 258 LQGGMGNE 265
>sp|VP22_VZVD|TEGUMENT protein VP22|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LAGGAGNQ 10
L GG GN+
Sbjct: 258 LQGGMGNE 265
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 GGAGN 9
GGAGN
Sbjct: 572 GGAGN 576
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 1 VFLAGGAGNQ 10
VF++ G+G++
Sbjct: 197 VFVSNGSGDR 206
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 FLAGGAG 8
+LAGGA
Sbjct: 264 YLAGGAA 270
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 FLAGGAG 8
+LAGGA
Sbjct: 264 YLAGGAA 270
>sp|PG043_MONPV|MONOGLYCERIDE lipase homolog|Monkeypox virus (MPXV)
Query: 1 VFLAGGAGNQ 10
VF++ GAG
Sbjct: 29 VFISHGAGEH 38
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 3 LAGGAG 8
LAGG+G
Sbjct: 5 LAGGSG 10
>sp|BMRF2_EBVG|PROTEIN BMRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VFLAGGAGN 9
+FLA G+G+
Sbjct: 167 IFLALGSGS 175
>sp|BMRF2_EBVB9|PROTEIN BMRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VFLAGGAGN 9
+FLA G+G+
Sbjct: 167 IFLALGSGS 175
>sp|BMRF2_EBVA8|PROTEIN BMRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VFLAGGAGN 9
+FLA G+G+
Sbjct: 167 IFLALGSGS 175
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 2 FLAGGAGN 9
F GG GN
Sbjct: 46 FQTGGIGN 53
8|SequenceR|45|36|PTDRHVFLAG
>sp|YHL4_HCMVA|UNCHARACTERIZED protein HHLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PTDRHVF 7
P DRHVF
Sbjct: 93 PLDRHVF 99
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PTDRHVFLA 9
P D+HVF A
Sbjct: 440 PNDQHVFCA 448
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PTDRHVFLA 9
P D+HVF A
Sbjct: 440 PNDQHVFCA 448
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PTDRHVFLA 9
P D+HVF A
Sbjct: 440 PNDQHVFCA 448
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PTDRHVFL 8
PT+RH F
Sbjct: 530 PTERHPFF 537
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 PTDRHVFL 8
PT+RH F
Sbjct: 530 PTERHPFF 537
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 PTDRHVFLA 9
P D H FL+
Sbjct: 140 PVDLHAFLS 148
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 PTDRHVFLA 9
P+D H FL+
Sbjct: 141 PSDLHQFLS 149
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 PTDRHVFLA 9
P+D H FL+
Sbjct: 141 PSDLHQFLS 149
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 4 RHVFLAG 10
+H+F+AG
Sbjct: 330 KHLFMAG 336
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 RHVFLAG 10
+H+F+AG
Sbjct: 330 KHLFMAG 336
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 RHVFLAG 10
+H+F+AG
Sbjct: 331 KHLFMAG 337
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 4 RHVFLAG 10
+H+F+AG
Sbjct: 325 KHLFMAG 331
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PTDRHVFLA 9
PT H FL+
Sbjct: 5587 PTHAHTFLS 5595
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 4 RHVFLA 9
RH+F+A
Sbjct: 217 RHIFMA 222
Query: 3 DRHVFL 8
+RH+FL
Sbjct: 127 ERHIFL 132
>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate
Query: 4 RHVFLA 9
RH+F+A
Sbjct: 217 RHIFMA 222
Query: 3 DRHVFL 8
+RH+FL
Sbjct: 127 ERHIFL 132
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 4 RHVFLA 9
RH+F+A
Sbjct: 217 RHIFMA 222
Query: 3 DRHVFL 8
+RH+FL
Sbjct: 127 ERHIFL 132
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 RHVFLA 9
RH+F+A
Sbjct: 217 RHIFMA 222
Query: 3 DRHVFL 8
+RH+FL
Sbjct: 127 ERHIFL 132
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 4 RHVFLA 9
RH+F+A
Sbjct: 217 RHIFMA 222
Query: 3 DRHVFL 8
+RH+FL
Sbjct: 127 ERHIFL 132
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 4 RHVFLA 9
RH+F+A
Sbjct: 217 RHIFMA 222
Query: 3 DRHVFL 8
+RH+FL
Sbjct: 127 ERHIFL 132
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 4 RHVFLA 9
RH+F+A
Sbjct: 217 RHIFMA 222
Query: 3 DRHVFL 8
+RH+FL
Sbjct: 127 ERHIFL 132
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 4 RHVFLA 9
RH+F+A
Sbjct: 217 RHIFMA 222
Query: 3 DRHVFL 8
+RH+FL
Sbjct: 127 ERHIFL 132
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 1 PTDRHVFLA 9
P D H+F +
Sbjct: 362 PEDTHLFFS 370
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 1 PTDRHVFLA 9
P D H+F +
Sbjct: 362 PEDTHLFFS 370
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 1 PTDRHVF 7
PTD H+
Sbjct: 267 PTDSHIL 273
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 1 PTDRHV 6
PT RH+
Sbjct: 448 PTHRHI 453
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 1 PTDRHV 6
PT RH+
Sbjct: 467 PTHRHI 472
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 PTDRHV 6
PT RH+
Sbjct: 459 PTHRHI 464
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 PTDRHV 6
PT RH+
Sbjct: 459 PTHRHI 464
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 PTDRHV 6
PT RH+
Sbjct: 453 PTHRHI 458
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 PTDRHV 6
PT RH+
Sbjct: 452 PTHRHI 457
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 1 PTDRHV 6
PT RH+
Sbjct: 445 PTHRHI 450
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 1 PTDRHV 6
PT RH+
Sbjct: 439 PTHRHI 444
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 1 PTDRHV 6
PT RH+
Sbjct: 444 PTHRHI 449
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 1 PTDRHVF 7
PTD H+
Sbjct: 267 PTDSHIL 273
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 PTDRHVFLA 9
PT RH + +
Sbjct: 61 PTQRHTYYS 69
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 PTDRHVFLA 9
PT RH + +
Sbjct: 61 PTQRHTYYS 69
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain
Query: 1 PTDRHVFLA 9
PT RH + +
Sbjct: 61 PTQRHTYYS 69
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 PTDRHVFLA 9
PT RH + +
Sbjct: 61 PTQRHTYYS 69
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 1 PTDRHV 6
P DRH+
Sbjct: 209 PEDRHI 214
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 1 PTDRHV 6
P DRH+
Sbjct: 209 PEDRHI 214
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 1 PTDRHV 6
P DRH+
Sbjct: 209 PEDRHI 214
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 1 PTDRHV 6
P DRH+
Sbjct: 209 PEDRHI 214
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 1 PTDRHV 6
P DRH+
Sbjct: 209 PEDRHI 214
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 1 PTDRHV 6
P DRH+
Sbjct: 209 PEDRHI 214
9|SequenceR|50|41|DPNNEPTDRH
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 NNEPTDRH 10
NN+P DR+
Sbjct: 163 NNQPQDRN 170
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 4 NEPTDRH 10
NEP RH
Sbjct: 44 NEPNSRH 50
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 PNNEPTDR 9
PN EPT R
Sbjct: 357 PNYEPTPR 364
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 2 PNNEPTDRH 10
PN EP H
Sbjct: 305 PNGEPPSHH 313
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 DPNNEPTDRH 10
DP + P+D H
Sbjct: 136 DPKDFPSDLH 145
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 DPNNEPTDRH 10
DP + P+D H
Sbjct: 136 DPKDFPSDLH 145
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 DPNNEPTDRH 10
DP + P D H
Sbjct: 135 DPKDFPVDLH 144
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 1 DPNNEPTDR 9
D NEP DR
Sbjct: 54 DIENEPKDR 62
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 3 NNEPTDRH 10
N E DRH
Sbjct: 208 NKEEVDRH 215
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 3 NNEPTDRH 10
N E DRH
Sbjct: 208 NKEEVDRH 215
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 3 NNEPTDRH 10
N E DRH
Sbjct: 208 NKEEVDRH 215
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 3 NNEPTDRH 10
N E DRH
Sbjct: 208 NKEEVDRH 215
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PNNEPTDRH 10
PNN RH
Sbjct: 299 PNNNVRRRH 307
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 3 NNEPTD 8
N EPTD
Sbjct: 100 NEEPTD 105
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DPNNEPT 7
DP N PT
Sbjct: 113 DPTNSPT 119
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 1 DPNNEPTD 8
DP +EPT
Sbjct: 150 DPGDEPTS 157
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 1 DPNNEPTD 8
DP +EPT
Sbjct: 159 DPGDEPTS 166
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 DPNNEPTDRH 10
DPN+ T+R
Sbjct: 384 DPNSRITERQ 393
>sp|GG_HHV11|ENVELOPE glycoprotein G|Human herpesvirus 1 (strain 17)
Query: 1 DPNNEP 6
DPNN P
Sbjct: 131 DPNNSP 136
>sp|ICP34_HHV1D|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain CVG-2)
Query: 2 PNNEPTDR 9
PN+EP R
Sbjct: 34 PNSEPVVR 41
10|SequenceR|55|46|FDFPTDPNNE
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 67 PTDPN 71
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 65 PTDPN 69
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 77 PTDPN 81
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 76 PTDPN 80
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 76 PTDPN 80
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 81 PTDPN 85
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 76 PTDPN 80
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 76 PTDPN 80
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 76 PTDPN 80
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 76 PTDPN 80
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 76 PTDPN 80
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 76 PTDPN 80
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 72 PTDPN 76
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 72 PTDPN 76
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 72 PTDPN 76
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 77 PTDPN 81
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PTDPNNE 10
PT+P+N+
Sbjct: 900 PTEPHNQ 906
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 4 PTDPN 8
PTDPN
Sbjct: 75 PTDPN 79
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 6 DPNNE 10
DPNNE
Sbjct: 339 DPNNE 343
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 6 DPNNE 10
DPNNE
Sbjct: 339 DPNNE 343
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 6 DPNNE 10
DPNNE
Sbjct: 339 DPNNE 343
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 6 DPNNE 10
DPNNE
Sbjct: 339 DPNNE 343
>sp|E320_ADE03|EARLY E3 20.1 kDa glycoprotein|Human adenovirus B serotype 3
Query: 1 FDFPTDPNNE 10
F PT PN +
Sbjct: 124 FTSPTTPNEK 133
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 1 FDFPTDPN 8
FD+ ++PN
Sbjct: 378 FDYSSNPN 385
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PTDPNN 9
P DP+N
Sbjct: 554 PADPDN 559
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 6 DPNNE 10
DPNNE
Sbjct: 339 DPNNE 343
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 6 DPNNE 10
DPNNE
Sbjct: 339 DPNNE 343
>sp|GO_HHV7J|GLYCOPROTEIN U47 homolog|Human herpesvirus 7 (strain JI)
Query: 1 FDFPTDPNNE 10
F+FPT N +
Sbjct: 111 FEFPTKTNRK 120
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 1 FDFPTDPN 8
FD+ ++PN
Sbjct: 373 FDYSSNPN 380
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 1 FDFPTDPNN 9
DF +DP N
Sbjct: 763 IDFGSDPKN 771
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 FDFPTDP 7
++FPT P
Sbjct: 1686 YNFPTKP 1692
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FDFPTDPNN 9
DF +DP N
Sbjct: 763 IDFGSDPKN 771
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 4 PTDPNN 9
PT PNN
Sbjct: 901 PTLPNN 906
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 PTDPNN 9
PT PNN
Sbjct: 901 PTLPNN 906
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 4 PTDPNN 9
PT PNN
Sbjct: 901 PTLPNN 906
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 PTDPNN 9
PT PNN
Sbjct: 901 PTLPNN 906
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 DFPTDP 7
+FP DP
Sbjct: 98 EFPRDP 103
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 3 FPTDPNNE 10
FP D NN+
Sbjct: 552 FPFDSNNK 559
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 3 FPTDPN 8
FP +PN
Sbjct: 532 FPNNPN 537
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 3 FPTDPN 8
FP +PN
Sbjct: 532 FPNNPN 537
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 3 FPTDPN 8
FP +PN
Sbjct: 532 FPNNPN 537
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 DFPTDP 7
+FP DP
Sbjct: 98 EFPRDP 103
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 2 DFPTDPNNE 10
D+PT P +E
Sbjct: 764 DYPTPPASE 772
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 DFPTDP 7
+FP DP
Sbjct: 98 EFPRDP 103
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 DFPTDP 7
+FP DP
Sbjct: 98 EFPRDP 103
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 3 FPTDPN 8
FP +PN
Sbjct: 532 FPNNPN 537
11|SequenceR|60|51|YNEPTFDFPT
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPTFDFP 9
EP+F+FP
Sbjct: 478 EPSFNFP 484
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 PTFDFP 9
PTF+FP
Sbjct: 494 PTFNFP 499
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NEPTFDF 8
N+PT DF
Sbjct: 217 NKPTLDF 223
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NEPTFDF 8
N+PT DF
Sbjct: 37 NKPTLDF 43
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NEPTFDF 8
N+PT DF
Sbjct: 317 NKPTLDF 323
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NEPTFDF 8
N+PT DF
Sbjct: 317 NKPTLDF 323
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NEPTFDF 8
N+PT DF
Sbjct: 317 NKPTLDF 323
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NEPTFDF 8
N+PT DF
Sbjct: 317 NKPTLDF 323
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NEPTFDF 8
N+PT DF
Sbjct: 86 NKPTLDF 92
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NEPTFDF 8
N+PT DF
Sbjct: 317 NKPTLDF 323
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 NEPTFDF 8
N+PT DF
Sbjct: 317 NKPTLDF 323
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NEPTFDF 8
N+PT DF
Sbjct: 317 NKPTLDF 323
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NEPTFDF 8
N+PT DF
Sbjct: 317 NKPTLDF 323
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 NEPTFDF 8
N+PT DF
Sbjct: 37 NKPTLDF 43
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 NEPTFDF 8
N+PT DF
Sbjct: 37 NKPTLDF 43
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNEPTF 6
YN PTF
Sbjct: 665 YNSPTF 670
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNEPTF 6
YN PTF
Sbjct: 668 YNTPTF 673
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNEPTF 6
YN PTF
Sbjct: 667 YNTPTF 672
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNEPTF 6
YN PTF
Sbjct: 668 YNTPTF 673
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNEPTF 6
YN PTF
Sbjct: 666 YNTPTF 671
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNEPTF 6
YN PTF
Sbjct: 665 YNTPTF 670
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNEPTF 6
YN PTF
Sbjct: 667 YNTPTF 672
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 5 TFDFPT 10
T DFPT
Sbjct: 1632 TLDFPT 1637
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 5 TFDFPT 10
T DFPT
Sbjct: 1632 TLDFPT 1637
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNEPTF 6
YN PTF
Sbjct: 667 YNTPTF 672
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNEPTF 6
YN PTF
Sbjct: 667 YNTPTF 672
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNEPTF 6
YN PTF
Sbjct: 666 YNTPTF 671
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNEPTF 6
YN PTF
Sbjct: 667 YNTPTF 672
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNEPTF 6
YN PTF
Sbjct: 667 YNTPTF 672
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 4 PTFDFPT 10
PT+DF T
Sbjct: 763 PTYDFDT 769
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 YNEPTFDFP 9
YN FD+P
Sbjct: 378 YNVANFDWP 386
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 YNEPTFDFP 9
YN FD+P
Sbjct: 378 YNVANFDWP 386
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 YNEPTFDFP 9
YN FD+P
Sbjct: 378 YNVANFDWP 386
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 5 TFDFP 9
TFDFP
Sbjct: 483 TFDFP 487
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 5 TFDFP 9
TFDFP
Sbjct: 483 TFDFP 487
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 2 NEPTFD 7
NEP FD
Sbjct: 618 NEPIFD 623
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 2 NEPTFDF 8
N P+FDF
Sbjct: 204 NTPSFDF 210
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 1 YNEPTFDF 8
YN PTF+
Sbjct: 196 YNNPTFEV 203
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 YNEPTFDFP 9
+ EPT D P
Sbjct: 682 HGEPTCDLP 690
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 YNEPTFDFP 9
+ EPT D P
Sbjct: 682 HGEPTCDLP 690
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 YNEPTFDFP 9
+ EPT D P
Sbjct: 682 HGEPTCDLP 690
>sp|VE8E2_HPV65|PROTEIN E8^E2C|Human papillomavirus 65
Query: 2 NEPTFDF 8
N P+FDF
Sbjct: 12 NTPSFDF 18
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 YNEPTFDFPT 10
Y +FD PT
Sbjct: 2237 YRANSFDVPT 2246
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 YNEPTFDFPT 10
Y +FD PT
Sbjct: 2237 YRANSFDVPT 2246
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PTFDFPT 10
P++ FPT
Sbjct: 701 PSYGFPT 707
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 2 NEPTFDFP 9
+EP DFP
Sbjct: 444 DEPDRDFP 451
>sp|VP40_MABVP|MATRIX protein VP40|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 YNEPTFD 7
YNEPT
Sbjct: 72 YNEPTVK 78
>sp|PAX_I02A5|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 3 EPTFDFPT 10
EP D PT
Sbjct: 209 EPCADLPT 216
>sp|PAX_I05A1|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 EPTFDFPT 10
EP D PT
Sbjct: 209 EPCADLPT 216
>sp|PAX_I02A6|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 3 EPTFDFPT 10
EP D PT
Sbjct: 209 EPCADLPT 216
12|SequenceR|65|56|AEIRKYNEPT
>sp|VP40_MABVP|MATRIX protein VP40|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 EIRKYNEPT 10
+I YNEPT
Sbjct: 68 DISAYNEPT 76
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 IRKYNEPT 10
+RK N+PT
Sbjct: 264 MRKLNKPT 271
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 IRKYNEPT 10
+RK N+PT
Sbjct: 264 MRKLNKPT 271
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AEIRKYNEP 9
A IRK EP
Sbjct: 297 AHIRKATEP 305
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 AEIRKYNEP 9
A IRK EP
Sbjct: 288 AHIRKATEP 296
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 2 EIRKYNEPT 10
E R Y EPT
Sbjct: 76 ETRTYGEPT 84
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 AEIRKYNEP 9
A IRK EP
Sbjct: 288 AHIRKATEP 296
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 3 IRKYNEP 9
+R YN+P
Sbjct: 206 VRAYNQP 212
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 3 IRKYNEP 9
+R YN+P
Sbjct: 206 VRAYNQP 212
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 3 IRKYNEP 9
+R YN+P
Sbjct: 206 VRAYNQP 212
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 3 IRKYNEP 9
+R YN+P
Sbjct: 206 VRAYNQP 212
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 KYNEPT 10
+YN+PT
Sbjct: 4495 RYNKPT 4500
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 IRKYNEP 9
+R YN+P
Sbjct: 206 VRAYNQP 212
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 3 IRKYNEP 9
+R YN+P
Sbjct: 206 VRAYNQP 212
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 3 IRKYNEP 9
+R YN+P
Sbjct: 206 VRAYNQP 212
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 3 IRKYNEP 9
+R YN+P
Sbjct: 206 VRAYNQP 212
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 3 IRKYNEP 9
+R YN+P
Sbjct: 206 VRAYNQP 212
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 KYNEPT 10
+YN PT
Sbjct: 4520 RYNRPT 4525
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 3 IRKYNEPT 10
+RK N+P+
Sbjct: 1384 VRKLNDPS 1391
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 IRKYNEPT 10
+RK N+P+
Sbjct: 1384 VRKLNDPS 1391
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 IRKYNEPT 10
+RK N+P+
Sbjct: 1385 VRKLNDPS 1392
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 IRKYNEPT 10
+RK N+P+
Sbjct: 1384 VRKLNDPS 1391
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 IRKYNEPT 10
+RK N+P+
Sbjct: 1384 VRKINDPS 1391
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 IRKYNEPT 10
+RK N+P+
Sbjct: 1385 VRKLNDPS 1392
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 IRKYNEPT 10
+RK N+P+
Sbjct: 1384 VRKLNDPS 1391
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 IRKYNEPT 10
+RK N+P+
Sbjct: 1385 VRKLNDPS 1392
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 IRKYNEPT 10
+RK N+P+
Sbjct: 1384 VRKLNDPS 1391
>sp|TAT_HV2G1|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 AEIRKYNEPT 10
+ + YNEP+
Sbjct: 10 SSLESYNEPS 19
13|SequenceR|70|61|YNKVIAEIRK
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 YNKVIAEIR 9
YN+V+ EI+
Sbjct: 2481 YNEVLKEIK 2489
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 NKVIAEIRK 10
NK++ EI++
Sbjct: 745 NKIMEEIKR 753
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 NKVIAEIRK 10
NK++ EI++
Sbjct: 745 NKIMEEIKR 753
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VIAEIRK 10
+IAEIRK
Sbjct: 912 LIAEIRK 918
14|SequenceR|75|66|KHGEPYNKVI
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 2 HGEPY 6
HGEPY
Sbjct: 3 HGEPY 7
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 2 HGEPY 6
HGEPY
Sbjct: 3 HGEPY 7
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 HGEPY 6
HGEPY
Sbjct: 3 HGEPY 7
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 HGEPY 6
HGEPY
Sbjct: 3 HGEPY 7
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 1 KHGEPYN 7
KHG+P N
Sbjct: 150 KHGDPEN 156
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 EPYNKVI 10
+PYN+V+
Sbjct: 680 DPYNEVV 686
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 EPYNKVI 10
+PYN+V+
Sbjct: 680 DPYNEVV 686
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 EPYNKVI 10
+PYN+V+
Sbjct: 681 DPYNEVV 687
>sp|SPI2_MONPV|SERINE proteinase inhibitor 2|Monkeypox virus (MPXV)
Query: 2 HGEPYN 7
+GEP+N
Sbjct: 170 YGEPFN 175
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 4 EPYNKVI 10
+PY KVI
Sbjct: 2592 QPYGKVI 2598
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 4 EPYNKVI 10
+PY KVI
Sbjct: 2592 QPYGKVI 2598
>sp|3BHS_VACCC|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 KHGEPY 6
KHG+P+
Sbjct: 126 KHGDPF 131
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 KHGEPY 6
KHG+P+
Sbjct: 126 KHGDPF 131
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 KHGEPY 6
+HG PY
Sbjct: 1534 QHGAPY 1539
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 KHGEPY 6
++GEPY
Sbjct: 630 RNGEPY 635
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 1 KHGEPYN 7
+HGE Y+
Sbjct: 364 RHGEEYD 370
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 1 KHGEPYN 7
+HGE Y+
Sbjct: 394 RHGEEYD 400
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 KHGEPYN 7
+HGE Y+
Sbjct: 393 RHGEEYD 399
>sp|VE6_HPV70|PROTEIN E6|Human papillomavirus type 70
Query: 1 KHGEPY 6
++GEPY
Sbjct: 57 RNGEPY 62
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 1 KHGEPYN 7
+HGE Y+
Sbjct: 366 RHGEEYD 372
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 4 EPYNKVI 10
+PY KV+
Sbjct: 2588 QPYGKVV 2594
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 KHGEPYN 7
K G PYN
Sbjct: 554 KAGYPYN 560
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 HGEPYNK 8
GEPY K
Sbjct: 356 QGEPYLK 362
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 HGEPYNK 8
GEPY K
Sbjct: 356 QGEPYLK 362
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 HGEPYNK 8
GEPY K
Sbjct: 356 QGEPYLK 362
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 HGEPYNK 8
GEPY K
Sbjct: 356 QGEPYLK 362
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 HGEPYNK 8
GEPY K
Sbjct: 356 QGEPYLK 362
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 1 KHGEPYN 7
K G PYN
Sbjct: 422 KAGYPYN 428
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 KHGEPYN 7
K G PYN
Sbjct: 554 KAGYPYN 560
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 KHGEPYN 7
K G PYN
Sbjct: 554 KAGYPYN 560
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 KHGEPYN 7
K G PYN
Sbjct: 554 KAGYPYN 560
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 1 KHGEPYN 7
K G PYN
Sbjct: 553 KAGYPYN 559
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 1 KHGEPYN 7
K G PYN
Sbjct: 552 KAGYPYN 558
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 KHGEPYN 7
K G PYN
Sbjct: 554 KAGYPYN 560
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 KHGEPYN 7
K G PYN
Sbjct: 554 KAGYPYN 560
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 GEPYNK 8
G P+NK
Sbjct: 4881 GHPFNK 4886
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 1 KHGEPY 6
+ GEPY
Sbjct: 825 RQGEPY 830
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 HGEPYNKVI 10
HGE Y ++
Sbjct: 94 HGETYANIL 102
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 HGEPYNKVI 10
HGE Y ++
Sbjct: 94 HGETYANIL 102
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 HGEPYNKVI 10
HGE Y ++
Sbjct: 94 HGETYANIL 102
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 1 KHGEPYN 7
KHG P N
Sbjct: 152 KHGVPEN 158
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 1 KHGEPYN 7
KHG P N
Sbjct: 152 KHGVPEN 158
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 KHGEPYN 7
+HGE Y+
Sbjct: 363 RHGEEYD 369
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 KHGEPY 6
+ GEPY
Sbjct: 822 RQGEPY 827
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 GEPYNKVI 10
GEPY +++
Sbjct: 1076 GEPYLEIL 1083
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 KHGEPY 6
+ GEPY
Sbjct: 829 RQGEPY 834
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 KHGEPYN 7
KH E YN
Sbjct: 277 KHKERYN 283
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 KHGEPYNK 8
+HG+P+ +
Sbjct: 744 QHGQPFPR 751
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 KHGEPYN 7
+HGE Y+
Sbjct: 365 RHGEEYD 371
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 2 HGEPY 6
+GEPY
Sbjct: 3 YGEPY 7
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 KHGEPYNK 8
+HG+P+ +
Sbjct: 744 QHGQPFPR 751
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 KHGEPYNK 8
++GEP NK
Sbjct: 26 ENGEPVNK 33
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 KHGEPYNK 8
+HG+P+ +
Sbjct: 739 QHGQPFPR 746
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 1 KHGEPY 6
+HGE Y
Sbjct: 366 RHGEEY 371
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 1 KHGEPY 6
+HGE Y
Sbjct: 367 RHGEEY 372
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 HGEPY 6
+GEPY
Sbjct: 3 YGEPY 7
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 KHGEPYNKV 9
++GEP NK
Sbjct: 26 ENGEPVNKA 34
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 1 KHGEPYNKVI 10
KHG NK++
Sbjct: 90 KHGNVENKLV 99
15|SequenceR|80|71|LVAAAKHGEP
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 2 VAAAKHGEP 10
+AAAK G P
Sbjct: 584 LAAAKEGNP 592
>sp|3BHS_VACCC|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 2 VAAAKHGEP 10
+ KHG+P
Sbjct: 122 IGPNKHGDP 130
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 2 VAAAKHGEP 10
+ KHG+P
Sbjct: 122 IGPNKHGDP 130
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 6 KHGEP 10
KHG+P
Sbjct: 150 KHGDP 154
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 4 AAKHGEP 10
A KHG P
Sbjct: 2 ACKHGYP 8
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 LVAAAKH 7
LVAAA H
Sbjct: 1060 LVAAAPH 1066
>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)
Query: 1 LVAAAKH 7
LVAAA H
Sbjct: 153 LVAAAPH 159
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 LVAAAKH 7
LVAAA H
Sbjct: 1065 LVAAAPH 1071
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 LVAAAKH 7
LVAAA H
Sbjct: 1065 LVAAAPH 1071
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 LVAAAKH 7
LVAAA H
Sbjct: 1065 LVAAAPH 1071
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 LVAAAKH 7
LVAAA H
Sbjct: 1065 LVAAAPH 1071
16|SequenceR|85|76|LDLVPLVAAA
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 DLVPLVAAA 10
D+VPL A A
Sbjct: 872 DIVPLTAEA 880
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 DLVPLVAAA 10
D+VPL A A
Sbjct: 883 DIVPLTAEA 891
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 DLVPLVAAA 10
D+VPL A A
Sbjct: 878 DIVPLTAEA 886
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 DLVPLVAAA 10
D+VPL A A
Sbjct: 873 DIVPLTAEA 881
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 DLVPLVAAA 10
D+VPL A A
Sbjct: 873 DIVPLTAEA 881
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LDLVPLVAA 9
+DL+P+V A
Sbjct: 291 VDLIPIVVA 299
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LDLVPLVAA 9
+DL+P+V A
Sbjct: 291 VDLIPIVVA 299
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 DLVPLVAAA 10
D+VPL A A
Sbjct: 873 DVVPLTAEA 881
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 DLVPLVAAA 10
D+VPL A A
Sbjct: 877 DVVPLTAEA 885
>sp|L2MU_ADE12|LATE L2 mu core protein|Human adenovirus A serotype 12
Query: 3 LVPLVAAA 10
L+PL+AAA
Sbjct: 47 LIPLIAAA 54
>sp|KITH_VARV|THYMIDINE kinase|Variola virus
Query: 1 LDLVPL 6
LDL+PL
Sbjct: 122 LDLIPL 127
>sp|KITH_VAR67|THYMIDINE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LDLVPL 6
LDL+PL
Sbjct: 122 LDLIPL 127
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 LDLVPL 6
LDL+PL
Sbjct: 155 LDLIPL 160
>sp|M2_I88A7|MATRIX protein 2|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 5 PLVAAA 10
PLVAAA
Sbjct: 25 PLVAAA 30
>sp|M2_I81A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 5 PLVAAA 10
PLVAAA
Sbjct: 25 PLVAAA 30
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 5 PLVAAA 10
PLVAAA
Sbjct: 25 PLVAAA 30
>sp|M2_I67A2|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 5 PLVAAA 10
PLVAAA
Sbjct: 25 PLVAAA 30
>sp|M2_I61A1|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 5 PLVAAA 10
PLVAAA
Sbjct: 25 PLVAAA 30
>sp|M2_I54A1|MATRIX protein 2|Influenza A virus (strain A/Swine/May/1954
Query: 5 PLVAAA 10
PLVAAA
Sbjct: 25 PLVAAA 30
>sp|M2_I37A0|MATRIX protein 2|Influenza A virus (strain A/Swine/29/1937
Query: 5 PLVAAA 10
PLVAAA
Sbjct: 25 PLVAAA 30
>sp|COR10_ADE05|PRE-CORE protein X|Human adenovirus C serotype 5
Query: 3 LVPLVAAA 10
L+PL+AAA
Sbjct: 56 LIPLIAAA 63
>sp|COR10_ADE02|PRE-CORE protein X|Human adenovirus C serotype 2
Query: 3 LVPLVAAA 10
L+PL+AAA
Sbjct: 56 LIPLIAAA 63
>sp|YLR3_EBVP3|UNCHARACTERIZED protein BLRF3|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 2 DLVPLVAA 9
DL+PLV+A
Sbjct: 134 DLLPLVSA 141
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 LVPLVAAA 10
L+PLVA A
Sbjct: 381 LLPLVAQA 388
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LDLVPL 6
LD+VPL
Sbjct: 176 LDIVPL 181
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LDLVPL 6
LD+VPL
Sbjct: 173 LDIVPL 178
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 LDLVPLVAAA 10
++L PLVAAA
Sbjct: 335 IELHPLVAAA 344
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 DLVPLV 7
DLVP+V
Sbjct: 406 DLVPIV 411
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 1 LDLVPLV 7
D+VPLV
Sbjct: 548 FDMVPLV 554
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 LDLVPLVAAA 10
L L PL AAA
Sbjct: 2951 LKLTPLPAAA 2960
17|SequenceR|90|81|NQRQALDLVP
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 QRQALDLV 9
++QALDLV
Sbjct: 774 EKQALDLV 781
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 NQRQALDLV 9
++RQA+D V
Sbjct: 435 DERQAMDAV 443
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 NQRQALDL 8
NQ Q++DL
Sbjct: 696 NQEQSVDL 703
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 NQRQALDLV 9
++RQA+D V
Sbjct: 435 DERQAMDAV 443
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 NQRQALDLV 9
++RQA+D V
Sbjct: 435 DERQAMDAV 443
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 QRQALDLVP 10
QR+ DLVP
Sbjct: 224 QRRLEDLVP 232
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 2 QRQALDLVP 10
QR+ DLVP
Sbjct: 224 QRRLEDLVP 232
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 2 QRQALDLVP 10
QR+ DLVP
Sbjct: 224 QRRLEDLVP 232
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 QRQALDLVP 10
QR+ DLVP
Sbjct: 224 QRRLEDLVP 232
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain
Query: 2 QRQALDLVP 10
Q+Q L +VP
Sbjct: 38 QKQFLQIVP 46
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 QRQALDLVP 10
Q+Q L +VP
Sbjct: 38 QKQFLQIVP 46
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 RQALDLVP 10
R A+DL+P
Sbjct: 983 RAAVDLLP 990
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 RQALDLVP 10
R A+DL+P
Sbjct: 983 RAAVDLLP 990
18|SequenceR|95|86|IPLWGNQRQA
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 1 IPLWGNQRQ 9
+PLW N ++
Sbjct: 307 VPLWRNDKE 315
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 1 IPLWGNQRQ 9
+PLW N ++
Sbjct: 316 VPLWRNDKE 324
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 1 IPLWGNQRQ 9
+PLW N ++
Sbjct: 316 VPLWRNDKE 324
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 2 PLWGNQR 8
P WGN++
Sbjct: 222 PYWGNEK 228
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 WGNQRQA 10
WGN+R A
Sbjct: 109 WGNERSA 115
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 WGNQRQA 10
WGN+R A
Sbjct: 109 WGNERSA 115
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 2 PLWGNQ 7
P WGN+
Sbjct: 222 PYWGNE 227
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 3 LWGNQ 7
LWGNQ
Sbjct: 334 LWGNQ 338
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 3 LWGNQ 7
LWGNQ
Sbjct: 334 LWGNQ 338
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 2 PLWGNQ 7
P WGN+
Sbjct: 222 PYWGNE 227
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 3 LWGNQ 7
LWGNQ
Sbjct: 333 LWGNQ 337
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 2 PLWGNQ 7
P WGN+
Sbjct: 217 PYWGNE 222
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 PLWGNQ 7
P WGN+
Sbjct: 217 PYWGNE 222
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 PLWGNQ 7
P WGN+
Sbjct: 222 PYWGNE 227
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 3 LWGNQ 7
LWGNQ
Sbjct: 334 LWGNQ 338
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 3 LWGNQ 7
LWGNQ
Sbjct: 334 LWGNQ 338
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 PLWGNQ 7
P WGN+
Sbjct: 217 PYWGNE 222
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 2 PLWGNQ 7
P WGN+
Sbjct: 217 PYWGNE 222
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 PLWGNQ 7
P WGN+
Sbjct: 217 PYWGNE 222
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 5 GNQRQA 10
GNQRQA
Sbjct: 41 GNQRQA 46
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 4 WGNQRQ 9
WGN R+
Sbjct: 68 WGNDRK 73
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 WGNQRQ 9
WGN R+
Sbjct: 68 WGNDRK 73
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 4 WGNQRQA 10
W N RQ+
Sbjct: 293 WNNARQS 299
19|SequenceR|100|91|KNMASIPLWG
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 NMASIPLW 9
NM ++P+W
Sbjct: 391 NMTTLPVW 398
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 ASIPLW 9
A+IPLW
Sbjct: 1570 ANIPLW 1575
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 ASIPLW 9
A+IPLW
Sbjct: 1570 ANIPLW 1575
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 KNMASIPLW 9
KN + +P+W
Sbjct: 1593 KNQSPLPVW 1601
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 5 SIPLW 9
+IPLW
Sbjct: 1570 TIPLW 1574
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 5 SIPLW 9
+IPLW
Sbjct: 1570 AIPLW 1574
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 NMASIP 7
NM+SIP
Sbjct: 141 NMSSIP 146
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 2 NMASIPL 8
+MA+IPL
Sbjct: 51 SMAAIPL 57
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 2 NMASIPLWG 10
++ IPLW
Sbjct: 463 HIEDIPLWA 471
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 2 NMASIPLW 9
N+A+ LW
Sbjct: 108 NLAAFELW 115
20|SequenceR|105|96|LVEAVKNMAS
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 VEAVKNMAS 10
VEAVK+M +
Sbjct: 538 VEAVKSMTT 546
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 2 VEAVKNMAS 10
VEAVK+M +
Sbjct: 537 VEAVKSMTT 545
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 VEAVKNMAS 10
VEAVK+M +
Sbjct: 538 VEAVKSMTT 546
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 VEAVKNMAS 10
VEAVK+M +
Sbjct: 538 VEAVKSMTT 546
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 VEAVKNMAS 10
VEAVK+M +
Sbjct: 538 VEAVKSMTT 546
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 VEAVKNMA 9
VEAV N+A
Sbjct: 848 VEAVLNLA 855
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 VEAVKNMA 9
VEAV N+A
Sbjct: 848 VEAVLNLA 855
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 VEAVKNMAS 10
+EA KN A+
Sbjct: 537 IEAAKNFAT 545
21|SequenceR|110|101|MPPVQLVEAV
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 2 PPVQLVEAV 10
PP+QLV V
Sbjct: 183 PPIQLVNTV 191
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 PPVQLVEAV 10
PP ++EAV
Sbjct: 476 PPAAMIEAV 484
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 2 PPVQLVEAV 10
PP+QL+ +V
Sbjct: 215 PPLQLINSV 223
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 2 PPVQLVEA 9
PP+QLV +
Sbjct: 185 PPIQLVNS 192
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPVQLVEAV 10
PP VEAV
Sbjct: 194 PPFTTVEAV 202
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPVQLVEAV 10
PP VEAV
Sbjct: 194 PPFTTVEAV 202
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 3 PVQLVE 8
PVQ+VE
Sbjct: 107 PVQIVE 112
22|SequenceR|115|106|VEYVRMPPVQ
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 VEYVRMPP 8
VE+VR PP
Sbjct: 481 VEFVREPP 488
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 VEYVRMPPV 9
+ YV +PPV
Sbjct: 41 IGYVELPPV 49
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 VEYVRMPPV 9
+ YV +PP+
Sbjct: 41 IGYVELPPM 49
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 VEYVRMPPV 9
+ YV +PP+
Sbjct: 41 IGYVELPPM 49
>sp|VE2_HPV23|REGULATORY protein E2|Human papillomavirus 23
Query: 1 VEYVRMPPV 9
+E +R PPV
Sbjct: 99 LETIRSPPV 107
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 1 VEYVRMPPV 9
++YV PP+
Sbjct: 280 IQYVHPPPI 288
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 1 VEYVRMPPV 9
++YV PPV
Sbjct: 273 IQYVAQPPV 281
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 EYVRMP 7
EY+R+P
Sbjct: 215 EYIRIP 220
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 EYVRMP 7
EY+R+P
Sbjct: 215 EYIRIP 220
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 EYVRMP 7
EY+R+P
Sbjct: 215 EYIRIP 220
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 EYVRMP 7
EY+R+P
Sbjct: 215 EYIRIP 220
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 2 EYVRMP 7
EY+R+P
Sbjct: 215 EYIRIP 220
23|SequenceR|120|111|TYFTAVEYVR
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 FTAVEYVR 10
F+AVE+VR
Sbjct: 3181 FSAVEHVR 3188
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 YFTAVEYVR 10
YFT V Y++
Sbjct: 3834 YFTDVPYIK 3842
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 YFTAVEYVR 10
YFT V Y++
Sbjct: 3804 YFTDVPYIK 3812
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 YFTAVEYVR 10
YFT V Y++
Sbjct: 3784 YFTDVPYIK 3792
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 YFTAVEYVR 10
YFT V Y++
Sbjct: 3834 YFTDVPYIK 3842
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 YFTAVEYVR 10
YFT V Y++
Sbjct: 3784 YFTDVPYIK 3792
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 YFTAVEYVR 10
YFT V Y++
Sbjct: 3804 YFTDVPYIK 3812
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 TYFTAVEYV 9
+Y+ ++EY+
Sbjct: 1702 SYYESLEYI 1710
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 TYFTAVEYV 9
+Y+ ++EY+
Sbjct: 1702 SYYESLEYI 1710
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 YFTAVE 7
Y+TAVE
Sbjct: 534 YYTAVE 539
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 YFTAVEYVR 10
Y T+ EY+R
Sbjct: 534 YVTSGEYLR 542
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 YFTAVEYVR 10
Y T+ EY+R
Sbjct: 534 YVTSGEYLR 542
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 YFTAVEYVR 10
Y T+ EY+R
Sbjct: 534 YVTSGEYLR 542
24|SequenceR|125|116|KRNYMTYFTA
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 NYMTYFTA 10
N+MTYF A
Sbjct: 1519 NHMTYFAA 1526
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 3 NYMTYF 8
NYM+YF
Sbjct: 551 NYMSYF 556
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 RNYMTY 7
R+YMTY
Sbjct: 349 RDYMTY 354
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RNYMTY 7
R+YMTY
Sbjct: 349 RDYMTY 354
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RNYMTY 7
R+YMTY
Sbjct: 349 RDYMTY 354
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 KRNYMTYFTA 10
K NY+ Y T+
Sbjct: 3408 KENYVDYMTS 3417
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 KRNYMTYFTA 10
K NY+ Y T+
Sbjct: 3408 KENYVDYMTS 3417
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 KRNYMTYFTA 10
K NY+ Y T+
Sbjct: 3408 KENYVDYMTS 3417
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 4 YMTYFT 9
Y+TY+T
Sbjct: 220 YLTYYT 225
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 NYMTYF 8
NYM YF
Sbjct: 2167 NYMPYF 2172
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 3 NYMTYF 8
NY++YF
Sbjct: 551 NYLSYF 556
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 3 NYMTYF 8
NY++YF
Sbjct: 553 NYLSYF 558
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KRNYMTYF 8
K+NY+T F
Sbjct: 24 KKNYVTVF 31
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 NYMTYF 8
NYM YF
Sbjct: 2167 NYMPYF 2172
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 NYMTYFTA 10
NY+ Y T+
Sbjct: 3369 NYLDYMTS 3376
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 NYMTYFTA 10
NY+ Y T+
Sbjct: 3370 NYLDYMTS 3377
25|SequenceR|130|121|YKGVPKRNYM
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 1 YKGVPKRN 8
+KG+PKRN
Sbjct: 424 FKGIPKRN 431
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 2 KGVPKRN 8
KGVPK+N
Sbjct: 445 KGVPKKN 451
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 2 KGVPKRN 8
KGVPK+N
Sbjct: 459 KGVPKKN 465
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 2 KGVPKRN 8
KG PKRN
Sbjct: 459 KGTPKRN 465
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 2 KGVPKRN 8
KGVPK+N
Sbjct: 459 KGVPKKN 465
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 2 KGVPKRN 8
KGVPK+N
Sbjct: 459 KGVPKKN 465
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 2 KGVPKRN 8
KG+PK+N
Sbjct: 461 KGIPKKN 467
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 2 KGVPKRN 8
KG+PK+N
Sbjct: 415 KGIPKKN 421
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 2 KGVPKRN 8
KG+PK+N
Sbjct: 416 KGIPKKN 422
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 2 KGVPKRNYM 10
KGVPK++ M
Sbjct: 464 KGVPKKSCM 472
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 2 KGVPKRNYM 10
KGVPK++ M
Sbjct: 464 KGVPKKSCM 472
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 2 KGVPKRN 8
KG+PK+N
Sbjct: 463 KGIPKQN 469
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 2 KGVPKRN 8
KG+PK+N
Sbjct: 466 KGIPKQN 472
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 GVPKRNYM 10
G+PKR+++
Sbjct: 285 GIPKRDFI 292
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 GVPKRNYM 10
G+PKR+++
Sbjct: 277 GIPKRDFV 284
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 2 KGVPKRNYM 10
KG+PK++ M
Sbjct: 458 KGIPKKSCM 466
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 2 KGVPKRN 8
KG PK+N
Sbjct: 467 KGTPKKN 473
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 KGVPKRN 8
KG PK+N
Sbjct: 458 KGTPKKN 464
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 2 KGVPKRN 8
KG PK+N
Sbjct: 462 KGTPKKN 468
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 2 KGVPKRN 8
KG PK+N
Sbjct: 472 KGTPKKN 478
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 KGVPKRN 8
+G+PK+N
Sbjct: 465 QGIPKKN 471
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 2 KGVPKRN 8
+G+PK+N
Sbjct: 465 QGIPKKN 471
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 3 GVPKRN 8
GVPK+N
Sbjct: 452 GVPKKN 457
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 YKGVPKR 7
YK PKR
Sbjct: 884 YKAAPKR 890
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 2 KGVPKRNYM 10
+GVPK++ M
Sbjct: 458 QGVPKKSCM 466
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 YKGVPKR 7
YK PKR
Sbjct: 888 YKSAPKR 894
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 3 GVPKRN 8
G+PK+N
Sbjct: 465 GIPKKN 470
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 KGVPKRNY 9
K +PKR+Y
Sbjct: 665 KFIPKRSY 672
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 KGVPKRNY 9
K +PKR+Y
Sbjct: 665 KFIPKRSY 672
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 2 KGVPKRN 8
KG PK N
Sbjct: 451 KGTPKHN 457
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 2 KGVPKRN 8
KG PK N
Sbjct: 451 KGTPKHN 457
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 2 KGVPKRN 8
KG PK N
Sbjct: 455 KGTPKHN 461
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 3 GVPKRN 8
GVP+RN
Sbjct: 926 GVPERN 931
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 KGVPKRNY 9
K +PKR+Y
Sbjct: 665 KFIPKRSY 672
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 KGVPKRNY 9
K +PKR+Y
Sbjct: 665 KFIPKRSY 672
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 2 KGVPKRNY 9
K +PKR+Y
Sbjct: 665 KFIPKRSY 672
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 KGVPKRNY 9
K +PKR+Y
Sbjct: 665 KFIPKRSY 672
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 KGVPKRNY 9
K +PKR+Y
Sbjct: 665 KFIPKRSY 672
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 KGVPKRNY 9
K +PKR+Y
Sbjct: 665 KFIPKRSY 672
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 KGVPKRNY 9
K +PKR+Y
Sbjct: 665 KFIPKRSY 672
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 KGVPKRNY 9
K +PKR+Y
Sbjct: 665 KFIPKRSY 672
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 KGVPKRNY 9
K +PKR+Y
Sbjct: 665 KFIPKRSY 672
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 3 GVPKRN 8
VPKRN
Sbjct: 421 AVPKRN 426
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 KGVPKRNY 9
K +PKR+Y
Sbjct: 665 KFIPKRSY 672
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 4 VPKRN 8
VPKRN
Sbjct: 423 VPKRN 427
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 4 VPKRN 8
VPKRN
Sbjct: 422 VPKRN 426
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 4 VPKRN 8
VPKRN
Sbjct: 421 VPKRN 425
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 4 VPKRN 8
VPKRN
Sbjct: 423 VPKRN 427
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 4 VPKRN 8
VPKRN
Sbjct: 421 VPKRN 425
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 KGVPKRN 8
+G+PK N
Sbjct: 448 QGIPKHN 454
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 4 VPKRNY 9
VPKR Y
Sbjct: 418 VPKRRY 423
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 3 GVPKRN 8
G+P RN
Sbjct: 94 GIPSRN 99
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 GVPKRN 8
G+P RN
Sbjct: 94 GIPSRN 99
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 3 GVPKRN 8
G+P RN
Sbjct: 94 GIPSRN 99
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 3 GVPKRN 8
G+P RN
Sbjct: 94 GIPSRN 99
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 YKGVPKRNY 9
YK V +NY
Sbjct: 867 YKDVADKNY 875
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 YKGVPKRNY 9
YK V +NY
Sbjct: 867 YKDVADKNY 875
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 4 VPKRNY 9
VPKR Y
Sbjct: 418 VPKRRY 423
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 2 KGVPKRN 8
KG PK N
Sbjct: 699 KGCPKEN 705
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KGVPKRN 8
KG PK N
Sbjct: 699 KGCPKEN 705
26|SequenceR|135|126|CVQIHYKGVP
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CVQIHYKGV 9
C +++YKGV
Sbjct: 5767 CFKVYYKGV 5775
>sp|PHOSP_DUVV|PHOSPHOPROTEIN virus (DUVV)
Query: 3 QIHYKGVP 10
Q H +GVP
Sbjct: 36 QAHLQGVP 43
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VQIHYK 7
+Q+HYK
Sbjct: 239 IQVHYK 244
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VQIHYK 7
+Q+HYK
Sbjct: 239 IQVHYK 244
>sp|VE8E2_HPV54|PROTEIN E8^E2C|Human papillomavirus type 54
Query: 4 IHYKGVP 10
+H+KG P
Sbjct: 98 VHFKGEP 104
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 4 IHYKGVP 10
+H+KG P
Sbjct: 290 VHFKGEP 296
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 5 HYKGV 9
HYKGV
Sbjct: 373 HYKGV 377
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 IHYKGVP 10
I+Y G+P
Sbjct: 647 IYYNGLP 653
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 4 IHYKGVP 10
+HY G P
Sbjct: 358 VHYSGPP 364
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 CVQIHYKG 8
CVQ YK
Sbjct: 1093 CVQSFYKA 1100
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 CVQIHYK 7
CV++H K
Sbjct: 3578 CVEMHNK 3584
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 IHYKGV 9
+HY GV
Sbjct: 3751 VHYAGV 3756
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 CVQIHYK 7
CV++H K
Sbjct: 3578 CVEMHNK 3584
27|SequenceR|140|131|CPTTTCVQIH
>sp|PG130_VARV|39KDA core protein OPG130|Variola virus
Query: 2 PTTTCVQ 8
PTTTC Q
Sbjct: 157 PTTTCTQ 163
>sp|PG130_VAR67|39KDA core protein OPG130|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 PTTTCVQ 8
PTTTC Q
Sbjct: 157 PTTTCTQ 163
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 PTTTCV 7
PT TCV
Sbjct: 2686 PTATCV 2691
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 PTTTCV 7
PT TCV
Sbjct: 2687 PTATCV 2692
>sp|PG130_VACCC|39KDA core protein OPG130|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PTTTCVQ 8
PTTTC Q
Sbjct: 167 PTTTCTQ 173
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 1 CPTTTCVQ 8
PTTTC Q
Sbjct: 166 LPTTTCTQ 173
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 PTTTCVQIH 10
PT T ++H
Sbjct: 242 PTATVTEVH 250
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 2 PTTTCVQIH 10
PT T ++H
Sbjct: 242 PTATVTEVH 250
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PTTTCVQIH 10
PT T ++H
Sbjct: 242 PTATVTEVH 250
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PTTTCVQIH 10
PT T ++H
Sbjct: 242 PTATVTEVH 250
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 2 PTTTCVQIH 10
PT T ++H
Sbjct: 242 PTATVTEVH 250
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 2 PTTTCVQIH 10
PT T ++H
Sbjct: 242 PTATVTEVH 250
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PTTTCVQI 9
PT+ C Q+
Sbjct: 594 PTSGCAQV 601
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PTTTCVQI 9
PT+ C Q+
Sbjct: 594 PTSGCAQV 601
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PTTTCVQI 9
PT+ C Q+
Sbjct: 594 PTSGCAQV 601
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 CPTTTCVQ 8
CP C Q
Sbjct: 1640 CPCEICAQ 1647
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 CPTTTCVQ 8
CP C++
Sbjct: 2013 CPEAACIR 2020
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PTTTCVQIH 10
PT TC H
Sbjct: 135 PTRTCPDYH 143
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 1 CPTTTC 6
C TTTC
Sbjct: 387 CITTTC 392
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 PTTTCVQIH 10
PT T +Q H
Sbjct: 577 PTETAIQAH 585
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 PTTTCVQIH 10
PT T +Q H
Sbjct: 577 PTETAIQAH 585
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 PTTTCVQ 8
PT CVQ
Sbjct: 1672 PTMECVQ 1678
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 PTTTCVQIH 10
PT T +Q H
Sbjct: 577 PTETAIQAH 585
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 1 CPTTTC 6
CP T C
Sbjct: 382 CPITKC 387
>sp|US20_HCMVM|MEMBRANE protein US20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CPTTTCVQ 8
CP C++
Sbjct: 199 CPPNQCIR 206
28|SequenceR|145|136|SNRLMCPTTT
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 SNRLMCPT 8
SN+L+CPT
Sbjct: 581 SNQLLCPT 588
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SNRLMCPTTT 10
S +L+CPTT
Sbjct: 593 SGKLICPTTV 602
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 SNRLMCPT 8
+N L+CPT
Sbjct: 580 ANELLCPT 587
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 SNRLMCPT 8
+N L+CPT
Sbjct: 581 ANELLCPT 588
>sp|VE7_HPV38|PROTEIN E7|Human papillomavirus 38
Query: 3 RLMCPT 8
RL+CPT
Sbjct: 85 RLLCPT 90
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 SNRLMCPTTT 10
+NR CPT T
Sbjct: 924 ANRPTCPTLT 933
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SNRLMCPTT 9
SNR+M P T
Sbjct: 127 SNRVMIPAT 135
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 SNRLMCPTTT 10
+NR CPT T
Sbjct: 924 ANRPTCPTLT 933
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 SNRLMCPTT 9
SNR+M P T
Sbjct: 127 SNRVMIPAT 135
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 SNRLMCPTT 9
SNR+M P T
Sbjct: 127 SNRVMIPAT 135
>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SNRLMCPTT 9
+NRLMC T
Sbjct: 65 ANRLMCRYT 73
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 NRLMC 6
NRLMC
Sbjct: 1562 NRLMC 1566
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 2 NRLMCPTTT 10
N +M P+TT
Sbjct: 475 NSVMAPSTT 483
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 NRLMC 6
NRLMC
Sbjct: 1562 NRLMC 1566
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SNRLMCPT 8
S +++CPT
Sbjct: 599 SGKIICPT 606
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 SNRLMCPT 8
+N L+CPT
Sbjct: 576 NNTLLCPT 583
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 NRLMCPT 8
N L+CPT
Sbjct: 582 NSLVCPT 588
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 SNRLMCPT 8
+N L+CPT
Sbjct: 576 NNTLLCPT 583
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 NRLMCPT 8
N ++CPT
Sbjct: 76 NGILCPT 82
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 SNRLMCPTT 9
SNRL P+T
Sbjct: 888 SNRLCLPST 896
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 SNRLMCPT 8
SNR+ C T
Sbjct: 362 SNRVFCDT 369
>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus
Query: 1 SNRLMCPT 8
SNR+ C T
Sbjct: 362 SNRVFCDT 369
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 SNRLMCPT 8
SNR+ C T
Sbjct: 362 SNRVFCDT 369
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 SNRLMCPTT 9
SNRL P+T
Sbjct: 888 SNRLCLPST 896
>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 1 SNRLMCPT 8
SNR+ C T
Sbjct: 362 SNRVFCDT 369
>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 1 SNRLMCPT 8
SNR+ C T
Sbjct: 362 SNRVFCDT 369
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 SNRLMCPT 8
S L+CPT
Sbjct: 580 SEDLLCPT 587
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 SNRLMCPT 8
S L+CPT
Sbjct: 580 SEDLLCPT 587
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SNRLMCPT 8
+N L+CPT
Sbjct: 576 NNTLVCPT 583
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 NRLMCPT 8
N L+CPT
Sbjct: 577 NTLVCPT 583
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 1 SNRLMCPT 8
S MCPT
Sbjct: 432 SQATMCPT 439
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 SNRLMCPT 8
S L+CPT
Sbjct: 580 STDLLCPT 587
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 SNRLMCPT 8
+N L CPT
Sbjct: 577 NNSLKCPT 584
29|SequenceR|150|141|ELISDSNRLM
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 3 ISDSNR 8
ISDSNR
Sbjct: 292 ISDSNR 297
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 ELISDSNRL 9
ELI DSN L
Sbjct: 1378 ELIYDSNPL 1386
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 4 SDSNRLM 10
S+SNRLM
Sbjct: 584 SNSNRLM 590
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 4 SDSNRLM 10
S+SNRLM
Sbjct: 584 SNSNRLM 590
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 SDSNRLM 10
S+SNRLM
Sbjct: 584 SNSNRLM 590
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 SDSNRLM 10
S+SNRLM
Sbjct: 584 SNSNRLM 590
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 ELISDSNRL 9
ELI DSN L
Sbjct: 1376 ELIYDSNPL 1384
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 ELISDSNRL 9
ELI DSN L
Sbjct: 1376 ELIYDSNPL 1384
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 1 ELISDSNRLM 10
EL++DSN M
Sbjct: 255 ELVTDSNLQM 264
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 ELISDSNRL 9
EL++D N+L
Sbjct: 2095 ELVTDYNQL 2103
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 ELISDSNRL 9
EL++D N+L
Sbjct: 2095 ELVTDYNQL 2103
30|SequenceR|155|146|KKQIAELISD
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 KKQIAELISD 10
KKQ+ L+SD
Sbjct: 19 KKQLGSLVSD 28
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1)
Query: 1 KKQIAELISD 10
KKQ+ L+SD
Sbjct: 19 KKQLGSLVSD 28
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 KKQIAELISD 10
KKQ+ L+SD
Sbjct: 19 KKQLGSLVSD 28
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 1 KKQIAELIS 9
K+Q+A+L+S
Sbjct: 62 KRQLADLVS 70
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 KKQIAE 6
KKQ+AE
Sbjct: 93 KKQVAE 98
31|SequenceR|160|151|VKIGLKKQIA
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 4 GLKKQIA 10
GLK QIA
Sbjct: 309 GLKAQIA 315
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 10 IKICLQKQV 18
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 4 IKICLQKQV 12
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 4 IKICLQKQV 12
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 4 IKICLQKQV 12
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 4 IKICLQKQV 12
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 4 IKICLQKQV 12
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 10 IKICLQKQV 18
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 3 IKICLQKQV 11
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 4 IKICLQKQV 12
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 3 IKICLQKQV 11
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 17 IKICLQKQV 25
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 3 IKICLQKQV 11
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 4 IKICLQKQV 12
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 17 IKICLQKQV 25
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 1 VKIGLKKQI 9
+KI L+KQ+
Sbjct: 17 IKICLQKQV 25
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 5 LKKQIA 10
LKKQIA
Sbjct: 105 LKKQIA 110
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 LKKQIA 10
LKKQIA
Sbjct: 105 LKKQIA 110
32|SequenceR|165|156|PTTEGVKIGL
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 PTTEGVKIGL 10
PT E VKIG+
Sbjct: 458 PTEEVVKIGV 467
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PTTEGVKIGL 10
PT+ G+ IGL
Sbjct: 453 PTSYGLDIGL 462
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 2 TTEGVKIGL 10
T EG++IG+
Sbjct: 180 TKEGIQIGV 188
>sp|M2_I97A1|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I97A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I96A3|MATRIX protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I96A2|MATRIX protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I96A0|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I89A2|MATRIX protein 2|Influenza A virus (strain A/Beijing/353/1989
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I88A7|MATRIX protein 2|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I88A5|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I88A3|MATRIX protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I85A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I83A8|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I83A1|MATRIX protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I82A9|MATRIX protein 2|Influenza A virus (strain A/Philippines/2/1982
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I81A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I80AA|MATRIX protein 2|Influenza A virus (strain A/India/6263/1980
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I80A4|MATRIX protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I80A2|MATRIX protein 2|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I79A0|MATRIX protein 2|Influenza A virus (strain A/Bangkok/1/1979
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I78A8|MATRIX protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I78A7|MATRIX protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I78A3|MATRIX protein 2|Influenza A virus (strain A/Mallard/New
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I77AB|MATRIX protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I77AA|MATRIX protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I77A9|MATRIX protein 2|Influenza A virus (strain A/Equine/New
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I77A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I76A6|MATRIX protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I75A0|MATRIX protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I73A5|MATRIX protein 2|Influenza A virus (strain A/Port
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I72A8|MATRIX protein 2|Influenza A virus (strain A/Udorn/1972
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I72A4|MATRIX protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I72A3|MATRIX protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I72A2|MATRIX protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I71A1|MATRIX protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I70A0|MATRIX protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I69A0|MATRIX protein 2|Influenza A virus (strain A/England/878/1969
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I68A6|MATRIX protein 2|Influenza A virus (strain A/Northern
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I68A5|MATRIX protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I68A4|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I68A0|MATRIX protein 2|Influenza A virus (strain A/Aichi/2/1968
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I67A2|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I67A0|MATRIX protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I61A1|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I60A0|MATRIX protein 2|Influenza A virus (strain A/Ann
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I57A5|MATRIX protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I57A1|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I57A0|MATRIX protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I54A2|MATRIX protein 2|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I51A0|MATRIX protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I50A0|MATRIX protein 2|Influenza A virus (strain A/Fort
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I45A0|MATRIX protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I43A0|MATRIX protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I40A0|MATRIX protein 2|Influenza A virus (strain A/Hickox/1940
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I37A0|MATRIX protein 2|Influenza A virus (strain A/Swine/29/1937
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I36A0|MATRIX protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I33A0|MATRIX protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I30A0|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I18A0|MATRIX protein 2|Influenza A virus (strain A/Brevig
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I07A0|MATRIX protein 2|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 60 PSTEGV 65
>sp|M2_I02A6|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I02A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I02A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I01A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I01A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 66 PSTEGV 71
>sp|M2_I01A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I01A0|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I00A1|MATRIX protein 2|Influenza A virus (strain A/New
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I00A0|MATRIX protein 2|Influenza A virus (strain A/Duck/Hong
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I000F|MATRIX protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I59A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I82A7|MATRIX protein 2|Influenza A virus (strain A/Swine/Hong
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I34A1|MATRIX protein 2|Influenza A virus (strain A/Puerto
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I85A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I35A3|MATRIX protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I000X|MATRIX protein 2|Influenza A virus (strain A/X-31
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|M2_I06A0|MATRIX protein 2|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 PTTEGV 6
P+TEGV
Sbjct: 63 PSTEGV 68
>sp|GLYC_HRSV2|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 PTTEGVKIGL 10
PTT GVK+ L
Sbjct: 117 PTTPGVKLTL 126
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 3 TEGVKIGL 10
T G+KIGL
Sbjct: 29 TWGLKIGL 36
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 2 TTEGVKIG 9
T EG++IG
Sbjct: 64 TKEGLQIG 71
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 2 TTEGVKIG 9
T EG++IG
Sbjct: 163 TKEGLEIG 170
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 1 PTTEGV 6
P TEGV
Sbjct: 248 PETEGV 253
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 2 TTEGVKIG 9
T EG++IG
Sbjct: 163 TKEGLQIG 170
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 2 TTEGVK 7
TTEG+K
Sbjct: 361 TTEGLK 366
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 TTEGVK 7
TTEG+K
Sbjct: 361 TTEGLK 366
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 2 TTEGVK 7
TTEG+K
Sbjct: 361 TTEGLK 366
33|SequenceR|170|161|TFLKDPTTEG
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 1 TFLKDPTT 8
+FL++PTT
Sbjct: 859 SFLQNPTT 866
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 TFLKDPTTEG 10
+F+K+PT G
Sbjct: 590 SFVKNPTDTG 599
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 TFLKDPTTEG 10
+F+K+PT G
Sbjct: 590 SFVKNPTDTG 599
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 TFLKDPTTEG 10
+F+K+PT G
Sbjct: 590 SFVKNPTDTG 599
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 TFLKDPTTEG 10
+F+K+PT G
Sbjct: 590 SFVKNPTDTG 599
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 TFLKDPTTEG 10
+F+K+PT G
Sbjct: 590 SFVKNPTDTG 599
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 TFLKDPTTEG 10
+F+K+PT G
Sbjct: 590 SFVKNPTDTG 599
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 TFLKDPTTEG 10
+F+K+PT G
Sbjct: 590 SFVKNPTDTG 599
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 TFLKDPTTEG 10
+F+K+PT G
Sbjct: 590 SFVKNPTDTG 599
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 TFLKDPTTE 9
T+L DP+++
Sbjct: 6393 TYLNDPSSK 6401
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 FLKDPTTEG 10
F+K+PT G
Sbjct: 591 FVKNPTDTG 599
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 TFLKDP 6
TFLK+P
Sbjct: 746 TFLKNP 751
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 TFLKDPTTEG 10
+F+K PT G
Sbjct: 575 SFVKTPTDTG 584
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 FLKDPTT 8
L+DPTT
Sbjct: 960 LLEDPTT 966
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 5 DPTTEG 10
DPT EG
Sbjct: 102 DPTAEG 107
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TFLKDP 6
TFLK+P
Sbjct: 746 TFLKNP 751
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TFLKDPTT 8
T L+DP T
Sbjct: 1153 TLLRDPRT 1160
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TFLKDPTT 8
T L+DP T
Sbjct: 1153 TLLRDPRT 1160
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 TFLKDPTT 8
T L+DP T
Sbjct: 1153 TLLRDPRT 1160
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TFLKDP 6
TFLK+P
Sbjct: 745 TFLKNP 750
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 FLKDPTT 8
L+DPTT
Sbjct: 960 LLEDPTT 966
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 FLKDPTT 8
L+DPTT
Sbjct: 960 LLEDPTT 966
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 FLKDPTT 8
L+DPTT
Sbjct: 960 LLEDPTT 966
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 FLKDPTT 8
L+DPTT
Sbjct: 960 LLEDPTT 966
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 FLKDPTT 8
L+DPTT
Sbjct: 961 LLEDPTT 967
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 FLKDPTT 8
L+DPTT
Sbjct: 961 LLEDPTT 967
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 FLKDPTT 8
L+DPTT
Sbjct: 960 LLEDPTT 966
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 FLKDPTT 8
L+DPTT
Sbjct: 960 LLEDPTT 966
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 FLKDPTT 8
L+DPTT
Sbjct: 960 LLEDPTT 966
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 FLKDPTT 8
L+DPTT
Sbjct: 960 LLEDPTT 966
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 FLKDPTT 8
L+DPTT
Sbjct: 960 LLEDPTT 966
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 3 LKDPTTEG 10
L+DPT +G
Sbjct: 515 LQDPTLDG 522
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 1 TFLKDPT 7
+FL DPT
Sbjct: 411 SFLNDPT 417
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 1 TFLKDPT 7
+FL DPT
Sbjct: 411 SFLNDPT 417
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 1 TFLKDPT 7
+FL DPT
Sbjct: 411 SFLNDPT 417
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 LKDPTTEG 10
L+DPT +G
Sbjct: 515 LQDPTLDG 522
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 1 TFLKDPT 7
+FL DPT
Sbjct: 411 SFLNDPT 417
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 1 TFLKDPT 7
+FL DPT
Sbjct: 411 SFLNDPT 417
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 FLKDPTTEG 10
FL+ P TE
Sbjct: 22 FLRSPETEA 30
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 FLKDPTTEG 10
FL+ P TE
Sbjct: 22 FLRSPETEA 30
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FLKDPTTEG 10
FL+ P TE
Sbjct: 22 FLRSPETEA 30
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 TFLKDPTTEG 10
TF+ D TT+
Sbjct: 369 TFIGDDTTDA 378
>sp|YEC4_EBVB9|UNCHARACTERIZED protein EC-RF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LKDPT 7
LKDPT
Sbjct: 189 LKDPT 193
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 TFLKDPTTEG 10
TF+ D TT+
Sbjct: 369 TFIGDDTTDA 378
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 TFLKDPTTEG 10
TF+ D TT+
Sbjct: 369 TFIGDDTTDA 378
34|SequenceR|175|166|EVEILTFLKD
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 EVEILTFLKD 10
++ ++TFLKD
Sbjct: 1848 DLPMITFLKD 1857
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 EVEILTFLKD 10
++ ++TFLKD
Sbjct: 1848 DLPMITFLKD 1857
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 EVEILTFLKD 10
++ ++TFLKD
Sbjct: 1844 DLPMITFLKD 1853
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 EVEILTFLKD 10
++ ++TFLKD
Sbjct: 1855 DLPMVTFLKD 1864
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 EVEILTFLKD 10
++ ++TFLKD
Sbjct: 1841 DLPMVTFLKD 1850
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 1 EVEILTFL 8
E+E LTFL
Sbjct: 252 EIEDLTFL 259
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 1 EVEILTFL 8
E+E LTFL
Sbjct: 252 EIEDLTFL 259
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 1 EVEILTFL 8
E+E LTFL
Sbjct: 252 EIEDLTFL 259
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 1 EVEILTFL 8
E+E LTFL
Sbjct: 252 EIEDLTFL 259
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 1 EVEILTFL 8
E+E LTFL
Sbjct: 252 EIEDLTFL 259
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 EVEILTFL 8
E+E LTFL
Sbjct: 252 EIEDLTFL 259
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 1 EVEILTFL 8
E+E LTFL
Sbjct: 252 EIEDLTFL 259
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 EILTFLK 9
EI+TFL+
Sbjct: 982 EIITFLR 988
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 EILTFLK 9
EI+TFL+
Sbjct: 982 EIITFLR 988
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 EILTFLK 9
EI+TFL+
Sbjct: 982 EIITFLR 988
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 EILTFLK 9
EI+TFL+
Sbjct: 982 EIITFLR 988
>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 VEILTFL 8
VE+L+FL
Sbjct: 42 VEVLSFL 48
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 EILTFLK 9
EI+TFL+
Sbjct: 982 EIITFLR 988
>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C
Query: 2 VEILTFL 8
VE+L+FL
Sbjct: 13 VEVLSFL 19
>sp|E1BS_ADE05|E1B protein, small T-antigen|Human adenovirus C serotype 5
Query: 2 VEILTFLKD 10
V L+F+KD
Sbjct: 93 VAFLSFIKD 101
>sp|E1BS_ADE02|E1B protein, small T-antigen|Human adenovirus C serotype 2
Query: 2 VEILTFLKD 10
V L+F+KD
Sbjct: 93 VAFLSFIKD 101
>sp|UL147_HCMVT|PUTATIVE viral CXC chemokine 2|Human cytomegalovirus (strain Towne)
Query: 3 EILTFLKD 10
E+L LKD
Sbjct: 81 EVLAILKD 88
35|SequenceR|180|171|CAGLCEVEIL
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)
Query: 1 CAGLC-EVEI 9
C GLC EV+I
Sbjct: 93 CTGLCVEVKI 102
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 1 CAGLC-EVEI 9
C GLC EV+I
Sbjct: 93 CTGLCVEVKI 102
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 CAGLCEVEIL 10
C GL E EI+
Sbjct: 153 CTGLGEEEIM 162
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 AGLCEV 7
AGLC+V
Sbjct: 692 AGLCQV 697
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 AGLCE 6
AGLCE
Sbjct: 469 AGLCE 473
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 AGLCE 6
AGLCE
Sbjct: 469 AGLCE 473
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 CAGLCE 6
CA LC+
Sbjct: 1023 CASLCQ 1028
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 1 CAGLCEVEIL 10
C G C + L
Sbjct: 229 CKGYCTISFL 238
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 CAGLCEVEIL 10
C G C V L
Sbjct: 221 CKGHCTVSFL 230
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 CAGLCEVEIL 10
C G C V L
Sbjct: 221 CKGHCTVSFL 230
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 CAGLCEVEIL 10
C G C V L
Sbjct: 221 CKGHCTVSFL 230
36|SequenceR|185|176|MPANVCAGLC
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 MPANVCAGLC 10
M N+C G C
Sbjct: 617 MKYNICMGKC 626
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 MPANVCAGLC 10
M N+C G C
Sbjct: 617 MKYNICMGKC 626
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 MPANVCAGLC 10
+P ++C+ +C
Sbjct: 220 VPLDICSSIC 229
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MPANVCAGL 9
+PA +C GL
Sbjct: 240 LPAALCRGL 248
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MPANVCAGL 9
+PA +C GL
Sbjct: 240 LPAALCRGL 248
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 1 MPANVCAGLC 10
+P ++C +C
Sbjct: 233 VPLDICTNIC 242
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 MPANVCAGLC 10
+P ++C +C
Sbjct: 250 VPLDICTSIC 259
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 1 MPANVCAGLC 10
+P ++C +C
Sbjct: 219 VPLDICQSIC 228
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 MPANVCAGLC 10
+P ++C +C
Sbjct: 220 VPLDICTSIC 229
>sp|TEG7_VZVO|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 VCAGLC 10
VCA LC
Sbjct: 4 VCASLC 9
>sp|TEG7_VZVD|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Dumas)
Query: 5 VCAGLC 10
VCA LC
Sbjct: 4 VCASLC 9
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 PANVCAGLC 10
PAN LC
Sbjct: 781 PANTMGNLC 789
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 MPANVCAGLC 10
+P ++C +C
Sbjct: 247 VPLDICQSIC 256
>sp|DR3_HHV6Z|UNCHARACTERIZED protein DR3|Human herpesvirus 6B (strain Z29)
Query: 5 VCAGLC 10
VCAGLC
Sbjct: 13 VCAGLC 18
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 NVCAGL 9
N CAGL
Sbjct: 153 NTCAGL 158
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 MPANVCAGLC 10
+P ++C +C
Sbjct: 221 VPLDICNSIC 230
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 4 NVCAGLC 10
N+C LC
Sbjct: 609 NLCKALC 615
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 MPANVCAGLC 10
+P ++C +C
Sbjct: 281 VPLDICQSIC 290
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 2 PANVC 6
PANVC
Sbjct: 218 PANVC 222
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PANVCAG 8
PA VC G
Sbjct: 157 PAGVCLG 163
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PANVCAG 8
PA VC G
Sbjct: 157 PAGVCLG 163
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 4 NVCAGLC 10
N C G C
Sbjct: 227 NFCKGYC 233
>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain
Query: 1 MPANVCA 7
MPA+ CA
Sbjct: 71 MPADFCA 77
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 PANVCAGLC 10
P VC G C
Sbjct: 1019 PKAVCTGDC 1027
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 VCAGL 9
VCAGL
Sbjct: 490 VCAGL 494
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 VCAGL 9
VCAGL
Sbjct: 490 VCAGL 494
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 VCAGL 9
VCAGL
Sbjct: 490 VCAGL 494
>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 VCAGLC 10
VC G C
Sbjct: 124 VCTGFC 129
>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 VCAGLC 10
VC G C
Sbjct: 124 VCTGFC 129
>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 VCAGLC 10
VC G C
Sbjct: 124 VCTGFC 129
37|SequenceR|190|181|DNIQVMPANV
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 2 NIQVMPANV 10
NIQ+ P N+
Sbjct: 245 NIQIPPENL 253
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 1 DNIQVMPANV 10
D+I ++P +V
Sbjct: 94 DSIDILPGDV 103
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 DNIQVMPAN 9
+ IQ++P N
Sbjct: 128 EKIQIIPKN 136
38|SequenceR|195|186|DEYYNDNIQV
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 YNDNIQV 10
+NDNIQ+
Sbjct: 1763 WNDNIQI 1769
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 3 YYNDNI 8
YYND I
Sbjct: 265 YYNDTI 270
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 3 YYNDNI 8
YYND I
Sbjct: 265 YYNDTI 270
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 3 YYNDNI 8
YYND I
Sbjct: 265 YYNDTI 270
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 3 YYNDNI 8
YYND I
Sbjct: 265 YYNDTI 270
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 1 DEYYNDNIQ 9
D YYN N++
Sbjct: 55 DIYYNGNVE 63
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 1 DEYYNDNIQ 9
D YYN N++
Sbjct: 55 DIYYNGNVE 63
>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 YNDNI 8
YNDN+
Sbjct: 226 YNDNV 230
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 2 EYYNDN 7
+Y+NDN
Sbjct: 409 DYWNDN 414
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 YYNDNI 8
YY DN+
Sbjct: 132 YYPDNV 137
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 YYNDNI 8
YY DN+
Sbjct: 132 YYPDNV 137
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 3 YYNDNI 8
YY DN+
Sbjct: 132 YYPDNV 137
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 3 YYNDNI 8
YY DN+
Sbjct: 132 YYPDNV 137
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 3 YYNDNI 8
YY DN+
Sbjct: 132 YYPDNV 137
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 3 YYNDNI 8
YY DN+
Sbjct: 132 YYPDNV 137
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 2 EYYNDN 7
+Y+NDN
Sbjct: 409 DYWNDN 414
39|SequenceR|200|191|DKATLDEYYN
>sp|NSP2_ROTH3|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 1 DKATLDEYYN 10
DK LD++YN
Sbjct: 36 DKKDLDKFYN 45
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 ATLDEYYN 10
AT+DE+ N
Sbjct: 102 ATMDEFLN 109
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 ATLDEYYN 10
AT+DE+ N
Sbjct: 102 ATMDEFLN 109
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 3 ATLDEYYN 10
AT+DE+ N
Sbjct: 102 ATMDEFLN 109
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 ATLDEYYN 10
AT+DE+ N
Sbjct: 102 ATMDEFLN 109
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 3 ATLDEYYN 10
AT+DE+ N
Sbjct: 102 ATMDEFLN 109
>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DKATLDEYYN 10
DK T+D YN
Sbjct: 212 DKYTIDARYN 221
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 DKATLDE 7
DKA +DE
Sbjct: 970 DKAVIDE 976
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 5 LDEYYN 10
LD++YN
Sbjct: 2485 LDQHYN 2490
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 5 LDEYYN 10
LD++YN
Sbjct: 2488 LDDHYN 2493
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 DKATLDEY 8
D+A L+EY
Sbjct: 2003 DEAYLEEY 2010
40|SequenceR|205|196|IIEEIDKATL
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 IIEEIDK 7
I+EEIDK
Sbjct: 3005 ILEEIDK 3011
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 2 IEEIDKATL 10
+ EID ATL
Sbjct: 443 VAEIDYATL 451
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 2 IEEIDKATL 10
+ EID ATL
Sbjct: 444 VAEIDYATL 452
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 IEEIDKATL 10
+EEIDK L
Sbjct: 499 LEEIDKNGL 507
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 IIEEIDK 7
I+E+IDK
Sbjct: 3005 ILEDIDK 3011
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 IEEIDKATL 10
+EEIDK L
Sbjct: 500 LEEIDKNGL 508
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 IIEEIDK 7
I+E+IDK
Sbjct: 3005 ILEDIDK 3011
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 IIEEIDK 7
I+E+IDK
Sbjct: 3005 ILEDIDK 3011
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 IEEIDK 7
+EEIDK
Sbjct: 124 VEEIDK 129
41|SequenceR|210|201|AKLEDIIEEI
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 2 KLEDIIEEI 10
K+E IIE+I
Sbjct: 55 KIESIIEKI 63
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KLEDIIEEI 10
K+E IIE+I
Sbjct: 55 KIESIIEKI 63
>sp|CORE5_ADE12|CORE-CAPSID bridging protein|Human adenovirus A serotype 12
Query: 2 KLEDIIEEI 10
KLED++E +
Sbjct: 187 KLEDVLEHM 195
>sp|CORE5_ADE05|CORE-CAPSID bridging protein|Human adenovirus C serotype 5
Query: 2 KLEDIIEEI 10
+LED++E++
Sbjct: 181 RLEDVLEKM 189
>sp|VPR_HV2UC|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 3 LEDIIEEI 10
+ED++EEI
Sbjct: 24 VEDVMEEI 31
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 AKLEDIIEEI 10
AKL D+ +EI
Sbjct: 1360 AKLADVHDEI 1369
>sp|CORE5_ADE02|CORE-CAPSID bridging protein|Human adenovirus C serotype 2
Query: 2 KLEDIIEEI 10
+LED++E++
Sbjct: 182 RLEDVLEKM 190
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KLEDIIEEI 10
K++D+IEE+
Sbjct: 602 KIDDMIEEV 610
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 AKLEDI 6
AKLED+
Sbjct: 257 AKLEDV 262
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 AKLEDI 6
AKLED+
Sbjct: 257 AKLEDV 262
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate
Query: 1 AKLEDIIE 8
A LED+IE
Sbjct: 35 ANLEDLIE 42
42|SequenceR|215|206|KPIKGAKLED
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 KPIKGA 6
KP+KGA
Sbjct: 515 KPVKGA 520
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KPIKGA 6
KP+KGA
Sbjct: 515 KPVKGA 520
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 2 PIKGAKL 8
PIK AKL
Sbjct: 378 PIKAAKL 384
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 1 KPIKGAKL 8
KP KGA L
Sbjct: 215 KPTKGADL 222
43|SequenceR|220|211|SRPGPKPIKG
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 3 PGPKPIK 9
PGPKP +
Sbjct: 300 PGPKPYR 306
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 SRPGPKP 7
SRPG KP
Sbjct: 326 SRPGDKP 332
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 SRPGPKP 7
SRPG KP
Sbjct: 326 SRPGDKP 332
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 3 PGPKP 7
PGP+P
Sbjct: 226 PGPRP 230
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 3 PGPKP 7
PGP+P
Sbjct: 226 PGPRP 230
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 3 PGPKP 7
PGP+P
Sbjct: 226 PGPRP 230
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 3 PGPKP 7
PGP+P
Sbjct: 226 PGPRP 230
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 3 PGPKP 7
PGP+P
Sbjct: 226 PGPRP 230
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 3 PGPKP 7
PGP+P
Sbjct: 226 PGPRP 230
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 3 PGPKP 7
PGP+P
Sbjct: 226 PGPRP 230
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 3 PGPKP 7
PGP+P
Sbjct: 226 PGPRP 230
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 3 PGPKP 7
PGP+P
Sbjct: 226 PGPRP 230
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 3 PGPKP 7
PGP+P
Sbjct: 226 PGPRP 230
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RPGPKP 7
RP PKP
Sbjct: 41 RPRPKP 46
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 1 SRPGP 5
SRPGP
Sbjct: 68 SRPGP 72
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 1 SRPGP 5
SRPGP
Sbjct: 68 SRPGP 72
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 1 SRPGP 5
SRPGP
Sbjct: 67 SRPGP 71
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RPGPKP 7
RP PKP
Sbjct: 585 RPTPKP 590
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RPGPKP 7
RP PKP
Sbjct: 585 RPTPKP 590
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PGPKPIKG 10
P P+ IKG
Sbjct: 825 PPPRKIKG 832
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PGPKPIKG 10
P P+ IKG
Sbjct: 825 PPPRKIKG 832
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 2 RPGPKP 7
RPGP P
Sbjct: 434 RPGPVP 439
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 SRPGP 5
SRPGP
Sbjct: 495 SRPGP 499
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 SRPGPKPIK 9
+R GP PI+
Sbjct: 105 ARDGPHPIE 113
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 PGPKPI 8
PGP P+
Sbjct: 659 PGPAPV 664
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 1 SRPGP 5
SRPGP
Sbjct: 11 SRPGP 15
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 SRPGPKP 7
+RP PKP
Sbjct: 943 ARPTPKP 949
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 SRPGP 5
SRPGP
Sbjct: 11 SRPGP 15
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 SRPGPKPIK 9
+R GP P++
Sbjct: 105 ARDGPHPVE 113
44|SequenceR|225|216|CSFRGSRPGP
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 4 RGSRPGP 10
RGSRPGP
Sbjct: 9 RGSRPGP 15
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 5 GSRPGP 10
G+RPGP
Sbjct: 35 GNRPGP 40
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 5 GSRPGP 10
G+RPGP
Sbjct: 35 GNRPGP 40
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 GSRPGP 10
G+RPGP
Sbjct: 35 GNRPGP 40
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 5 GSRPGP 10
G+RPGP
Sbjct: 35 GNRPGP 40
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 5 GSRPGP 10
G+RPGP
Sbjct: 35 GNRPGP 40
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 GSRPGP 10
G+RPGP
Sbjct: 35 GNRPGP 40
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 5 GSRPGP 10
G+RPGP
Sbjct: 35 GNRPGP 40
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 5 GSRPGP 10
G+RPGP
Sbjct: 35 GNRPGP 40
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 5 GSRPGP 10
G+RPGP
Sbjct: 35 GNRPGP 40
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 5 GSRPGP 10
G+RPGP
Sbjct: 35 GNRPGP 40
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CSFRGSRPG 9
C F+G PG
Sbjct: 397 CDFKGWIPG 405
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CSFRGSRPG 9
C F+G PG
Sbjct: 397 CDFKGWIPG 405
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 5 GSRPGP 10
GSRPGP
Sbjct: 10 GSRPGP 15
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 SFRGSRPGP 10
S +GS P P
Sbjct: 1690 SMKGSSPDP 1698
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 FRGSRP 8
FR SRP
Sbjct: 238 FRSSRP 243
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 3 FRGSRP 8
FR SRP
Sbjct: 238 FRSSRP 243
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 CSFRGSR 7
CSF GSR
Sbjct: 309 CSFIGSR 315
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 CSFRGSRPGP 10
C+ RG+ GP
Sbjct: 140 CALRGAPSGP 149
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 CSFRGSRPGP 10
C+ RG+ GP
Sbjct: 140 CALRGAPSGP 149
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 CSFRGSRPGP 10
C+ RG+ GP
Sbjct: 140 CALRGAPSGP 149
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 CSFRGSRPGP 10
C+ RG+ GP
Sbjct: 140 CALRGAPSGP 149
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 CSFRGSRPGP 10
C+ RG+ GP
Sbjct: 140 CALRGAPSGP 149
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 CSFRGSRPGP 10
C+ RG+ GP
Sbjct: 140 CALRGAPSGP 149
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 CSFRGSRPGP 10
C+ RG+ GP
Sbjct: 140 CALRGAPSGP 149
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 CSFRGSRPGP 10
C+ RG+ GP
Sbjct: 140 CALRGAPSGP 149
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 CSFRGSRPGP 10
C+ RG+ GP
Sbjct: 140 CALRGAPSGP 149
>sp|NCAP_MERS1|NUCLEOPROTEIN East respiratory syndrome-related coronavirus
Query: 4 RGSRPGP 10
RG+ PGP
Sbjct: 197 RGTSPGP 203
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 CSFRGS 6
C++RGS
Sbjct: 439 CNYRGS 444
45|SequenceR|230|221|GGAPECSFRG
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 1 GGAPECSFR 9
GG P C F+
Sbjct: 462 GGGPNCDFK 470
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 1 GGAPECSFR 9
GG P C F+
Sbjct: 462 GGGPNCDFK 470
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 GAPECSFR 9
GAP C+F+
Sbjct: 1083 GAPPCTFK 1090
>sp|UL28_HCMVA|UNCHARACTERIZED protein UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GGAPECSF 8
GG+P C+F
Sbjct: 246 GGSPACTF 253
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GGAPECSF 8
GG+P C+F
Sbjct: 567 GGSPACTF 574
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GGAPECSF 8
GG+P C+F
Sbjct: 568 GGSPACTF 575
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 4 PECSFR 9
P+CS+R
Sbjct: 167 PDCSYR 172
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 GAPEC 6
GAPEC
Sbjct: 1090 GAPEC 1094
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 GAPEC 6
GAPEC
Sbjct: 1090 GAPEC 1094
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 GAPEC 6
GAPEC
Sbjct: 1090 GAPEC 1094
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 GAPEC 6
GAPEC
Sbjct: 1080 GAPEC 1084
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 GAPECSFR 9
GAP CS +
Sbjct: 1086 GAPPCSIK 1093
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 2 GAPEC 6
GAPEC
Sbjct: 1090 GAPEC 1094
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 GAPEC 6
GAPEC
Sbjct: 1079 GAPEC 1083
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 GAPEC 6
GAPEC
Sbjct: 1079 GAPEC 1083
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 GAPEC 6
GAPEC
Sbjct: 1079 GAPEC 1083
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GAPECSFR 9
GAPE FR
Sbjct: 333 GAPEREFR 340
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 2 GAPECSFR 9
GAP+C +
Sbjct: 1081 GAPQCGIK 1088
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 2 GAPECSFR 9
GAP+C +
Sbjct: 1081 GAPQCGIK 1088
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 2 GAPECSFR 9
GAP+C +
Sbjct: 1080 GAPQCGIK 1087
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 3 APECSFRG 10
APEC +G
Sbjct: 23 APECIDKG 30
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 3 APECSFRG 10
APEC +G
Sbjct: 23 APECIDKG 30
>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)
Query: 2 GAPEC 6
GAPEC
Sbjct: 178 GAPEC 182
>sp|HBSAG_HBVC6|SMALL envelope protein|Hepatitis B virus genotype C
Query: 1 GGAPEC 6
GGAP C
Sbjct: 43 GGAPTC 48
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 GAPECS 7
G P+CS
Sbjct: 18 GCPKCS 23
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d
Query: 2 GAPECS 7
G P+CS
Sbjct: 18 GCPKCS 23
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 GAPEC 6
GAP+C
Sbjct: 1085 GAPQC 1089
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 2 GAPEC 6
GAP+C
Sbjct: 1081 GAPQC 1085
>sp|HBSAG_HBVCJ|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 GGAPEC 6
GGAP C
Sbjct: 217 GGAPTC 222
>sp|ORF23_TTVV1|PROBABLE protein VP2|Torque teno virus (strain VT416)
Query: 1 GGAPECS 7
GG P C+
Sbjct: 190 GGTPRCT 196
>sp|HBSAG_HBVC4|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 GGAPEC 6
GGAP C
Sbjct: 217 GGAPTC 222
46|SequenceR|235|226|TLSTLGGAPE
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 2 LSTLGGAP 9
LSTLG AP
Sbjct: 345 LSTLGSAP 352
>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TLSTLGGAP 9
TLSTLG P
Sbjct: 104 TLSTLGTCP 112
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 1 TLSTLGGAP 9
TLS+L G P
Sbjct: 247 TLSSLRGVP 255
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 TLSTLGGAP 9
T TLGG P
Sbjct: 1586 TQVTLGGKP 1594
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 TLSTLGGAP 9
T TLGG P
Sbjct: 1585 TQVTLGGKP 1593
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 TLSTLGGAP 9
T TLGG P
Sbjct: 1594 TQVTLGGKP 1602
>sp|REV_HV1YF|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 STLGGAPE 10
S LGG PE
Sbjct: 62 SCLGGPPE 69
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 5 LGGAPE 10
LGG+PE
Sbjct: 260 LGGSPE 265
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 5 LGGAPE 10
LGG+PE
Sbjct: 260 LGGSPE 265
47|SequenceR|240|231|GKPPETLSTL
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GKPPETLSTL 10
G PP+TLS L
Sbjct: 54 GAPPDTLSLL 63
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 3 PPETLST 9
PP+TL+T
Sbjct: 88 PPDTLTT 94
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 3 PPETLST 9
PP+TL+T
Sbjct: 88 PPDTLTT 94
>sp|DR5_HHV6U|UNCHARACTERIZED protein DR5|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GKPPETLS 8
G+PP TLS
Sbjct: 95 GRPPFTLS 102
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 KPPETLSTL 10
KP ETLS L
Sbjct: 300 KPAETLSML 308
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 1 GKPPETLSTL 10
GKPP T++ L
Sbjct: 176 GKPPSTMAKL 185
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GKPPETL 7
G PPE L
Sbjct: 700 GHPPERL 706
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 3 PPETLST 9
PPETL +
Sbjct: 27 PPETLKS 33
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 3 PPETLST 9
PPETL +
Sbjct: 27 PPETLKS 33
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 3 PPETLST 9
PPETL +
Sbjct: 27 PPETLKS 33
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 3 PPETLST 9
PPETL +
Sbjct: 27 PPETLKS 33
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 3 PPETLST 9
PPETL +
Sbjct: 27 PPETLKS 33
>sp|US8A_HHV2H|PROTEIN US8.5|Human herpesvirus 2 (strain HG52)
Query: 1 GKPPETL 7
G PPETL
Sbjct: 71 GDPPETL 77
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 PPETLSTL 10
PPET+ L
Sbjct: 793 PPETIQNL 800
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 PPETLSTL 10
PPET+ L
Sbjct: 793 PPETIQNL 800
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 KPPETLSTL 10
KP ETL+ L
Sbjct: 301 KPAETLAML 309
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 KPPETLSTL 10
KP ETL+ L
Sbjct: 300 KPAETLAML 308
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 KPPETLSTL 10
KP ETL+ L
Sbjct: 301 KPAETLAML 309
>sp|YVFA_VACCC|UNCHARACTERIZED 7.1 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GKPPETLSTL 10
G+PP T + L
Sbjct: 34 GRPPTTYNLL 43
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 3 PPETLST 9
PPETL T
Sbjct: 85 PPETLVT 91
48|SequenceR|249|236|LGAQVGFGPGKPPE
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 5 VGFGPGKPPE 14
V F PG PP+
Sbjct: 119 VSFNPGFPPQ 128
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 8 GPGKPPE 14
GP +PPE
Sbjct: 576 GPQRPPE 582
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LGAQVGFGPGKPP 13
L Q+G+ G PP
Sbjct: 243 LQEQIGWMTGNPP 255
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LGAQVGFGPGKPP 13
L Q+G+ G PP
Sbjct: 243 LQEQIGWMTGNPP 255
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 5 VGFGPGKPPE 14
VG G +PPE
Sbjct: 346 VGHGYNQPPE 355
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LGAQVGFGPGKPP 13
L Q+G+ G PP
Sbjct: 243 LQEQIGWMTGNPP 255
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LGAQVGFGPGKPP 13
L Q+G+ G PP
Sbjct: 243 LQEQIGWMTGNPP 255
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 5 VGFGPGKPP 13
VG+ P PP
Sbjct: 507 VGYAPAAPP 515
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 5 VGFGPGKPP 13
VG+ P PP
Sbjct: 504 VGYAPAAPP 512
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 6 GFGPGKPPE 14
F PG+P E
Sbjct: 1592 AFPPGRPQE 1600
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 6 GFGPGKPPE 14
F PG+P E
Sbjct: 1592 AFPPGRPQE 1600
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QVGFGPGKPP 13
Q+G+ G PP
Sbjct: 242 QIGWMTGNPP 251
>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14
Query: 3 AQVGFGPGKPP 13
A+V GP +PP
Sbjct: 137 AEVHPGPSRPP 147
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 5 VGFGPGKPPE 14
VG G +PPE
Sbjct: 346 VGHGYNQPPE 355
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 GAQVGFGPGKP 12
GA G G G P
Sbjct: 2342 GALFGLGKGMP 2352
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 QVGFGPGKPP 13
Q+G+ G PP
Sbjct: 242 QIGWMTGNPP 251
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 3 AQVGFGPGKPP 13
A++ GP +PP
Sbjct: 137 AEIHPGPSRPP 147
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 GAQVGFGPGKPPE 14
G G GP PE
Sbjct: 121 GECTGHGPSSSPE 133
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 AQVGFGPGKP 12
A +G G G P
Sbjct: 386 ADIGIGVGMP 395
>sp|GLYC_HRSV2|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 4 QVGFGPGKPPE 14
Q+G P P E
Sbjct: 96 QLGISPSNPSE 106
THE END