1|SequenceR|10|1|WGLLRRTALM
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 1 WGLLRRTALM 10
W LLRR A++
Sbjct: 33 WTLLRREAVL 42
>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3
Query: 2 GLLRRTAL 9
GLLRR+AL
Sbjct: 96 GLLRRSAL 103
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 WGLLRRTA 8
WG+LRR A
Sbjct: 826 WGVLRRAA 833
>sp|PRO_ADE04|PROTEASE adenovirus E serotype 4
Query: 2 GLLRRTAL 9
GLLRR+AL
Sbjct: 92 GLLRRSAL 99
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 1 WGLLRRTALM 10
W +LRR A++
Sbjct: 33 WQILRREAVL 42
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 WGLLRR 6
W LLRR
Sbjct: 231 WALLRR 236
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 WGLLRR 6
W LLRR
Sbjct: 221 WALLRR 226
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 1 WGLLRR 6
W LLRR
Sbjct: 139 WTLLRR 144
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 WGLLRR 6
W LLRR
Sbjct: 139 WTLLRR 144
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 1 WGLLRRTALM 10
W LLR+ A++
Sbjct: 33 WLLLRKEAVL 42
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 1 WGLLRRTALM 10
W +LR+ A++
Sbjct: 33 WQILRKEAVL 42
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 WGLLRRTA 8
W LL+R A
Sbjct: 1435 WRLLKRAA 1442
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 WGLLRR 6
W LLRR
Sbjct: 36 WNLLRR 41
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 WGLLRRTA 8
W LL+R A
Sbjct: 1435 WRLLKRAA 1442
2|SequenceR|15|6|RAPLSWGLLR
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 APLSWG 7
AP+SWG
Sbjct: 46 APVSWG 51
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 APLSWG 7
AP++WG
Sbjct: 46 APVNWG 51
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 2 APLSWG 7
AP++WG
Sbjct: 46 APVNWG 51
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 APLSWG 7
AP++WG
Sbjct: 46 APVNWG 51
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 APLSWG 7
AP++WG
Sbjct: 46 APVNWG 51
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 APLSWG 7
AP++WG
Sbjct: 46 APVNWG 51
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 APLSWG 7
AP++WG
Sbjct: 46 APVNWG 51
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 APLSWG 7
AP++WG
Sbjct: 46 APVNWG 51
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 APLSWG 7
AP++WG
Sbjct: 46 APVNWG 51
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 APLSWG 7
AP++WG
Sbjct: 46 APVNWG 51
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 APLSWG 7
AP++WG
Sbjct: 46 APVNWG 51
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 2 APLSWG 7
AP++WG
Sbjct: 45 APVNWG 50
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 APLSWG 7
AP++WG
Sbjct: 46 APVNWG 51
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 APLSWG 7
AP++WG
Sbjct: 46 APVNWG 51
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 APLSWG 7
AP++WG
Sbjct: 46 APVNWG 51
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 PLSWGLL 9
P+ WGL+
Sbjct: 1986 PIRWGLI 1992
>sp|UL20_VZVD|PROTEIN UL20 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PLSWG 7
P+SWG
Sbjct: 194 PVSWG 198
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 APLSWG 7
AP+ WG
Sbjct: 46 APVDWG 51
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 APLSWG 7
AP+ WG
Sbjct: 46 APVDWG 51
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 APLSWG 7
AP+ WG
Sbjct: 46 APVDWG 51
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 APLSWGLLR 10
A SWG+LR
Sbjct: 822 ARTSWGVLR 830
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 RAPLSW 6
R+P SW
Sbjct: 401 RSPASW 406
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 APLSWGL 8
+PL W L
Sbjct: 364 SPLKWAL 370
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 APLSWGL 8
+PL W L
Sbjct: 364 SPLKWAL 370
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 2 APLSWGL 8
+PL W L
Sbjct: 364 SPLKWAL 370
>sp|PG070_VACCC|PROTEIN OPG070|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PLSWGLLR 10
P+S GLL+
Sbjct: 69 PISLGLLK 76
>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)
Query: 3 PLSWGLLR 10
P+S GLL+
Sbjct: 69 PISLGLLK 76
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 4 LSWGLL 9
+SWGL+
Sbjct: 367 VSWGLI 372
>sp|PG070_VARV|PROTEIN OPG070|Variola virus
Query: 3 PLSWGLLR 10
P+S GLL+
Sbjct: 69 PISLGLLK 76
>sp|PG070_VAR67|PROTEIN OPG070|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 PLSWGLLR 10
P+S GLL+
Sbjct: 69 PISLGLLK 76
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 3 PLSWGLL 9
PL W LL
Sbjct: 890 PLDWFLL 896
>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus
Query: 1 RAPLSWG 7
+AP++W
Sbjct: 207 KAPINWA 213
>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RAPLSWG 7
+AP++W
Sbjct: 207 KAPINWA 213
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RAPLSWG 7
+AP++W
Sbjct: 207 KAPINWA 213
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 1 RAPLSW 6
R PL+W
Sbjct: 87 RIPLAW 92
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RAPLSW 6
R PL+W
Sbjct: 74 RIPLAW 79
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 4 LSWGLL 9
+SWGL+
Sbjct: 367 VSWGLV 372
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 4 LSWGLLR 10
L WG+LR
Sbjct: 403 LVWGILR 409
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 3 PLSWG 7
PL WG
Sbjct: 353 PLRWG 357
>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 RAPLSWGLL 9
R ++WGL+
Sbjct: 304 RDDVTWGLI 312
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RAPLSWGLL 9
R ++WGL+
Sbjct: 304 RDDVTWGLI 312
3|SequenceR|20|11|FRVSVRAPLS
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 4 SVRAPLS 10
SVR PLS
Sbjct: 276 SVRKPLS 282
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FRVSVRAPL 9
F VSVR P+
Sbjct: 58 FGVSVRTPV 66
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FRVSVRAPL 9
F VSVR P+
Sbjct: 58 FGVSVRTPV 66
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 FRVSVRAP 8
F VS++AP
Sbjct: 178 FLVSIKAP 185
4|SequenceR|25|16|TTDGSFRVSV
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DGSFRV 8
DGSFRV
Sbjct: 497 DGSFRV 502
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 TTDGSFRV 8
TTDG +RV
Sbjct: 1516 TTDGVYRV 1523
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 TTDGSFRV 8
TTDG +RV
Sbjct: 1520 TTDGVYRV 1527
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 TTDGSFRV 8
TTDG +RV
Sbjct: 1520 TTDGVYRV 1527
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 2 TDGSFRVS 9
TDG FR S
Sbjct: 1036 TDGVFRAS 1043
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 TDGSFRVS 9
TDG FR S
Sbjct: 1037 TDGVFRAS 1044
>sp|E3GL_ADE03|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 3 DGSFRVS 9
DGS R+S
Sbjct: 95 DGSIRIS 101
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 TTDGSFRV 8
T DG FR+
Sbjct: 2017 TMDGEFRL 2024
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TTDGSFR 7
TTD +FR
Sbjct: 26 TTDATFR 32
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TTDGSFR 7
TTD +FR
Sbjct: 26 TTDATFR 32
>sp|E3GL_ADE35|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 35
Query: 3 DGSFRVS 9
DGS R+S
Sbjct: 90 DGSIRIS 96
>sp|E3GL_ADE1P|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 11
Query: 3 DGSFRVS 9
DGS R+S
Sbjct: 90 DGSIRIS 96
>sp|E3GL_ADE1A|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 11
Query: 3 DGSFRVS 9
DGS R+S
Sbjct: 90 DGSIRIS 96
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 TTDGSFRVSV 10
+ DG+FR V
Sbjct: 1808 SLDGNFRTEV 1817
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 DGSFRVSV 10
DG+FR V
Sbjct: 1810 DGNFRTEV 1817
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 TDGSFRV 8
T GSFR+
Sbjct: 2185 TQGSFRL 2191
5|SequenceR|30|21|TKKPATTDGS
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 1 TKKPATTD 8
T KPATT+
Sbjct: 386 TYKPATTN 393
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 4 PATTDGS 10
PA DGS
Sbjct: 406 PANNDGS 412
6|SequenceR|35|26|LSGFSTKKPA
>sp|G7_VACCC|ASSEMBLY protein G7|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LSGFSTKKP 9
++GFS K+P
Sbjct: 185 VAGFSGKEP 193
>sp|G7_VACCA|ASSEMBLY protein G7|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LSGFSTKKP 9
++GFS K+P
Sbjct: 185 VAGFSGKEP 193
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 SGFSTKKP 9
SGF+T KP
Sbjct: 211 SGFNTLKP 218
>sp|G7_VARV|ASSEMBLY protein G7|Variola virus
Query: 1 LSGFSTKKP 9
++GFS K+P
Sbjct: 185 VAGFSGKEP 193
>sp|G7_VAR67|ASSEMBLY protein G7|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LSGFSTKKP 9
++GFS K+P
Sbjct: 185 VAGFSGKEP 193
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 GFSTKKPA 10
GFS++ PA
Sbjct: 1228 GFSSQSPA 1235
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 LSGFSTKKP 9
+SG ST KP
Sbjct: 838 ISGMSTLKP 846
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 LSGFSTKK 8
+SGFST +
Sbjct: 1867 VSGFSTPR 1874
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 LSGFSTKK 8
+SGFST +
Sbjct: 1867 VSGFSTPR 1874
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 LSGFSTKKP 9
L GF + KP
Sbjct: 1875 LLGFDSSKP 1883
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 LSGFSTKKP 9
L GF + KP
Sbjct: 1875 LLGFDSSKP 1883
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 LSGFSTK 7
L+GF TK
Sbjct: 570 LTGFKTK 576
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 LSGFSTKKPA 10
+SG+ST P+
Sbjct: 567 VSGYSTAAPS 576
7|SequenceR|40|31|RDEDKLSGFS
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 RDEDKLSGF 9
R+ED++ GF
Sbjct: 165 REEDQVEGF 173
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 RDEDKLSGF 9
R+ED++ GF
Sbjct: 165 REEDQVEGF 173
>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 RDEDKLSGF 9
R+ED++ GF
Sbjct: 165 REEDQVEGF 173
>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 RDEDKLSGF 9
R+ED++ GF
Sbjct: 165 REEDQVEGF 173
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 RDEDKLS 7
RD+D+LS
Sbjct: 1304 RDQDQLS 1310
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 RDEDKLS 7
RD+D+LS
Sbjct: 1304 RDQDQLS 1310
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3241 RDQDELVG 3248
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3241 RDQDELVG 3248
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3241 RDQDELVG 3248
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3241 RDQDELVG 3248
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3241 RDQDELVG 3248
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3241 RDQDELVG 3248
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3243 RDQDELVG 3250
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3243 RDQDELVG 3250
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3242 RDQDELVG 3249
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3239 RDQDELVG 3246
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 RDEDKLSGF 9
++E+KL GF
Sbjct: 994 QEEEKLRGF 1002
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3232 RDQDELIG 3239
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3254 RDQDELIG 3261
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3240 RDQDELIG 3247
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 RDEDKLSGF 9
++E+KL GF
Sbjct: 994 QEEEKLRGF 1002
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 RDEDKLSGF 9
RDED+L +
Sbjct: 693 RDEDELREY 701
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3240 RDQDELIG 3247
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 RDEDKL 6
RDED+L
Sbjct: 692 RDEDEL 697
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 RDEDKLSG 8
RD+D+L G
Sbjct: 3240 RDQDELIG 3247
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 RDEDKLSGF 9
RDED+L +
Sbjct: 693 RDEDELREY 701
>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RDEDKLSGFS 10
++ED SGF+
Sbjct: 231 KEEDANSGFT 240
>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RDEDKLSGFS 10
++ED SGF+
Sbjct: 231 KEEDANSGFT 240
>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RDEDKLSGFS 10
++ED SGF+
Sbjct: 231 KEEDANSGFT 240
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 EDKLSGF 9
EDK SG+
Sbjct: 57 EDKTSGY 63
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 EDKLSGF 9
EDK SG+
Sbjct: 57 EDKTSGY 63
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 3 EDKLSGF 9
EDK SG+
Sbjct: 57 EDKTSGY 63
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 DEDKLSG 8
DED LSG
Sbjct: 391 DEDYLSG 397
>sp|PG147_MONPV|VIRION membrane protein OPG147|Monkeypox virus (MPXV)
Query: 1 RDEDKLSGFS 10
+D D + GF+
Sbjct: 92 KDRDDIPGFA 101
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DEDKLSGFS 10
DE +L+G S
Sbjct: 721 DESELTGLS 729
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|PG147_VARV|VIRION membrane protein OPG147|Variola virus
Query: 1 RDEDKLSGFS 10
+D D + GF+
Sbjct: 94 KDRDDIPGFT 103
>sp|PG147_VAR67|VIRION membrane protein OPG147|Variola virus (isolate
Query: 1 RDEDKLSGFS 10
+D D + GF+
Sbjct: 94 KDRDDIPGFT 103
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|PG147_VACCC|VIRION membrane protein OPG147|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RDEDKLSGFS 10
+D D + GF+
Sbjct: 94 KDRDDIPGFA 103
>sp|A21_VACCA|VIRION membrane protein A21|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RDEDKLSGFS 10
+D D + GF+
Sbjct: 94 KDRDDIPGFA 103
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 2 DEDKLSGFS 10
D D SG+S
Sbjct: 399 DSDNRSGYS 407
8|SequenceR|45|36|LNTFIRDEDK
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 LNTFIRDED 9
+ TFI DED
Sbjct: 1056 METFIEDED 1064
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LNTFIRDED 9
+ TFI DED
Sbjct: 1056 METFIEDED 1064
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LNTFIRDED 9
+ TFI DED
Sbjct: 1056 METFIEDED 1064
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LNTFIRDED 9
+ TFI DED
Sbjct: 1056 METFIEDED 1064
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 LNTFIRDED 9
+ TFI DED
Sbjct: 1056 METFIEDED 1064
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 LNTFIRDEDK 10
+N F+R +DK
Sbjct: 1842 INLFVRSKDK 1851
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 LNTFIRDED 9
L TF RD D
Sbjct: 55 LRTFSRDTD 63
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LNTFIRDED 9
L TF RD D
Sbjct: 55 LRTFSRDTD 63
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 2 NTFIRDED 9
N+FI+D D
Sbjct: 189 NSFIQDGD 196
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LNTFIRDE 8
L+TF+ DE
Sbjct: 578 LDTFLNDE 585
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 LNTFIRDE 8
L+TF+ DE
Sbjct: 578 LDTFLNDE 585
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 LNTFIRDE 8
L+TF+ DE
Sbjct: 578 LDTFLNDE 585
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 LNTFIRDED 9
LN F+ D D
Sbjct: 6875 LNEFVSDAD 6883
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LNTFIRDED 9
LN F+ D D
Sbjct: 6875 LNDFVSDAD 6883
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LNTFIRDED 9
LN F+ D D
Sbjct: 6898 LNDFVSDAD 6906
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 NTFIRDED 9
NTF+ D D
Sbjct: 1403 NTFVYDPD 1410
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 NTFIRDED 9
N F+ DED
Sbjct: 1399 NKFVFDED 1406
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 NTFIRDED 9
N F+ DED
Sbjct: 1399 NKFVFDED 1406
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 2 NTFIRDED 9
NT+I+D D
Sbjct: 190 NTYIQDGD 197
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 TFIRDE 8
TF++DE
Sbjct: 1889 TFVKDE 1894
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 NTFIRDE 8
+TF++DE
Sbjct: 2120 STFLKDE 2126
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 LNTFIRDED 9
+NT I+D D
Sbjct: 191 INTVIQDGD 199
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 3 TFIRDE 8
TFIRD+
Sbjct: 329 TFIRDK 334
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 2 NTFIRDED 9
NT+I+D D
Sbjct: 192 NTYIQDGD 199
>sp|VP2_SOUV3|MINOR capsid protein VP2|Southampton virus (strain GI/Human/United
Query: 2 NTFIRDED 9
NTF D+D
Sbjct: 44 NTFEHDKD 51
9|SequenceR|50|41|DHRGYLNTFI
>sp|VP2_NVN68|MINOR capsid protein VP2|Norovirus (strain Human/NoV/United
Query: 3 RGYLNT 8
RGY NT
Sbjct: 196 RGYFNT 201
>sp|TRM2_HHV6Z|TRIPARTITE terminase subunit 2|Human herpesvirus 6B (strain Z29)
Query: 1 DHRGYLNT 8
+H+ YLNT
Sbjct: 98 EHQEYLNT 105
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 HRGYLNTFI 10
H GY+N I
Sbjct: 232 HDGYVNLLI 240
>sp|TRM2_HHV6U|TRIPARTITE terminase subunit 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DHRGYLNT 8
+H+ YLNT
Sbjct: 98 EHQEYLNT 105
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 1 DHRGYL 6
+HRGY+
Sbjct: 380 EHRGYV 385
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 1 DHRGYL 6
+HRGY+
Sbjct: 380 EHRGYV 385
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 1 DHRGYL 6
+HRGY+
Sbjct: 380 EHRGYV 385
>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 DHRGYLN 7
DH+ YL+
Sbjct: 193 DHKAYLD 199
>sp|VP1_POVBA|MAJOR capsid protein VP1|BK polyomavirus (strain AS) (BKPyV)
Query: 1 DHRGYLN 7
DH+ YL+
Sbjct: 193 DHKAYLD 199
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 DHRGYLNTFI 10
D GY +TFI
Sbjct: 2205 DSYGYGSTFI 2214
>sp|VE2_HPV1|REGULATORY protein E2|Human papillomavirus type 1 (Human
Query: 1 DHRGYLNTFI 10
+H GY N ++
Sbjct: 162 EHDGYKNYYV 171
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 DHRGYLNTFI 10
D GY +TFI
Sbjct: 2205 DSYGYGSTFI 2214
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 DHRGYLNTFI 10
DH +NTF+
Sbjct: 223 DHAEQVNTFL 232
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 DHRGYLNTFI 10
DH +NTF+
Sbjct: 223 DHAEQVNTFL 232
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1541 RAYLNT 1546
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1542 RAYLNT 1547
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1538 RAYLNT 1543
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1540 RAYLNT 1545
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1545 RAYLNT 1550
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1541 RAYLNT 1546
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1540 RAYLNT 1545
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1540 RAYLNT 1545
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1544 RAYLNT 1549
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1540 RAYLNT 1545
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1540 RAYLNT 1545
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1540 RAYLNT 1545
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1540 RAYLNT 1545
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1541 RAYLNT 1546
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1540 RAYLNT 1545
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 RGYLNT 8
R YLNT
Sbjct: 1540 RAYLNT 1545
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 1 DHRGYLNT 8
D RGY T
Sbjct: 230 DERGYYRT 237
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 HRGYLNTFI 10
H GY N I
Sbjct: 2776 HDGYTNEII 2784
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 DHRGYLN 7
DH G+L+
Sbjct: 1154 DHSGFLS 1160
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 DHRGYLN 7
+ RGY+N
Sbjct: 2577 EERGYVN 2583
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 HRGYLNTFI 10
H GY N I
Sbjct: 2776 HDGYTNEII 2784
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DHRGYLNTF 9
DH +L+TF
Sbjct: 1040 DHIPFLDTF 1048
10|SequenceR|55|46|GKLRWDHRGY
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 GKLRWDHRG 9
GK+RW ++G
Sbjct: 1218 GKMRWVYKG 1226
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 GKLRWDH-RGY 10
KLRW H RGY
Sbjct: 2567 AKLRWFHERGY 2577
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 GKLRWDH-RGY 10
KLRW H RGY
Sbjct: 2566 AKLRWFHERGY 2576
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 GKLRWDH-RGY 10
KLRW H RGY
Sbjct: 2567 AKLRWFHERGY 2577
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 GKLRWDH-RGY 10
KLRW H RGY
Sbjct: 2567 AKLRWMHERGY 2577
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 GKLRWDH-RGY 10
KLRW H RGY
Sbjct: 2567 AKLRWFHERGY 2577
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 GKLRWDH-RGY 10
KLRW H RGY
Sbjct: 2566 AKLRWFHERGY 2576
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 GKLRWDH-RGY 10
KLRW H RGY
Sbjct: 2566 AKLRWFHERGY 2576
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 GKLRWDH-RGY 10
KLRW H RGY
Sbjct: 2566 AKLRWFHERGY 2576
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GKLRWDH-RGY 10
KLRW H RGY
Sbjct: 2566 AKLRWFHERGY 2576
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GKLRWDH-RGY 10
KLRW H RGY
Sbjct: 2566 AKLRWFHERGY 2576
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 KLRWDHR 8
KLRWD +
Sbjct: 231 KLRWDKK 237
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KLRWDHR 8
KLRWD +
Sbjct: 231 KLRWDKK 237
>sp|UL10_HCMVA|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RWDHRGY 10
+WD RGY
Sbjct: 237 KWDTRGY 243
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 GKLRWDHRGY 10
GK+R DH+ +
Sbjct: 834 GKIRTDHKKW 843
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 GKLRWDHRGY 10
GK R+D R Y
Sbjct: 140 GKGRYDSRNY 149
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 GKLRWDH-RGY 10
K+RW H RGY
Sbjct: 2559 AKIRWLHERGY 2569
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 3 LRWDHRGY 10
LRW RG+
Sbjct: 734 LRWYTRGF 741
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 5 WDHRGY 10
W+H GY
Sbjct: 24 WEHGGY 29
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 LRWDHRG 9
LR+ HRG
Sbjct: 1023 LRYPHRG 1029
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LRWDHRG 9
LR+ HRG
Sbjct: 1023 LRYPHRG 1029
>sp|UL10_HCMVM|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RWDHRGY 10
+WD +GY
Sbjct: 236 KWDTKGY 242
>sp|PG005_MONPV|PROTEIN OPG005|Monkeypox virus (MPXV)
Query: 4 RWDHR 8
RW HR
Sbjct: 40 RWTHR 44
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 5 WDHRGY 10
WD GY
Sbjct: 183 WDENGY 188
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 WDHRGY 10
WD GY
Sbjct: 183 WDENGY 188
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 5 WDHRGY 10
WD GY
Sbjct: 183 WDENGY 188
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 2 KLRWDH 7
+L WDH
Sbjct: 454 RLGWDH 459
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 5 WDHRGY 10
+DHRG+
Sbjct: 306 YDHRGF 311
>sp|PG005_VACCC|PROTEIN OPG005|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 RWDHR 8
RW HR
Sbjct: 71 RWTHR 75
>sp|EBNA2_EBVG|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LRWDHRGY 10
L WD GY
Sbjct: 79 LDWDPLGY 86
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 4 RWDH 7
RWDH
Sbjct: 298 RWDH 301
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 GKLRWDHRGY 10
G R+D+ GY
Sbjct: 828 GHKRFDNTGY 837
>sp|NEP_INBYA|NUCLEAR export protein|Influenza B virus (strain B/Yamagata/1/1973)
Query: 2 KLRWD 6
KLRW+
Sbjct: 41 KLRWE 45
>sp|NEP_INBLE|NUCLEAR export protein|Influenza B virus (strain B/Lee/1940)
Query: 2 KLRWD 6
KLRW+
Sbjct: 41 KLRWE 45
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 KLRWD 6
KL+WD
Sbjct: 247 KLKWD 251
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 2 KLRWDHR 8
+L W+H+
Sbjct: 456 RLGWEHK 462
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KLRWDHR 8
+L W+H+
Sbjct: 456 RLGWEHK 462
11|SequenceR|60|51|GRSLSGKLRW
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 GRSLSGKLR 9
GR++S KLR
Sbjct: 361 GRTISPKLR 369
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 5 SGKLRW 10
SGK RW
Sbjct: 1364 SGKTRW 1369
>sp|X_HBVF2|PROTEIN X|Hepatitis B virus genotype F1
Query: 1 GRSLSGKL 8
GRSLSG L
Sbjct: 27 GRSLSGSL 34
>sp|X_HBVE2|PROTEIN X|Hepatitis B virus genotype E
Query: 1 GRSLSGKL 8
GRS+SG L
Sbjct: 27 GRSVSGSL 34
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 1 GRSLSGKLR 9
GR++S KLR
Sbjct: 363 GRTISEKLR 371
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 GRSLSGKLR 9
GR++S +LR
Sbjct: 361 GRTISPRLR 369
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 5 SGKLRW 10
+GKL W
Sbjct: 1126 AGKLHW 1131
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 3 SLSGKLRW 10
S+SG + W
Sbjct: 12 SVSGSMMW 19
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 SLSGKLRW 10
S+SG + W
Sbjct: 12 SVSGSMMW 19
12|SequenceR|65|56|TKYWDGRSLS
>sp|VP30_MABVO|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 WDGRSLS 10
WD RS+S
Sbjct: 237 WDKRSIS 243
>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 WDGRSLS 10
WD RS+S
Sbjct: 237 WDKRSIS 243
>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 WDGRSLS 10
WD RS+S
Sbjct: 237 WDKRSIS 243
>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 WDGRSLS 10
WD RS+S
Sbjct: 237 WDKRSIS 243
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 KYWDG 6
+YWDG
Sbjct: 2025 QYWDG 2029
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 KYWDG 6
+YWDG
Sbjct: 2025 QYWDG 2029
>sp|UL62_HCMVA|UNCHARACTERIZED protein UL62|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 WDGRSL 9
WDGR L
Sbjct: 146 WDGRGL 151
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 4 WDGRSL 9
WDGR +
Sbjct: 1503 WDGRQV 1508
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 4 WDGRSL 9
WDGR +
Sbjct: 1503 WDGRQV 1508
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 WDGRSL 9
WDGR +
Sbjct: 1503 WDGRQV 1508
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 4 WDGRSL 9
WDGR +
Sbjct: 1503 WDGRQV 1508
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 4 WDGRSL 9
WDGR +
Sbjct: 1503 WDGRQV 1508
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 4 WDGRSL 9
WDGR +
Sbjct: 1503 WDGRQV 1508
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 4 WDGRSL 9
WDGR +
Sbjct: 1503 WDGRQV 1508
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 WDGRSL 9
WDGR +
Sbjct: 1503 WDGRQV 1508
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 4 WDGRSL 9
WDGR +
Sbjct: 1503 WDGRQV 1508
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 YWDGRSLS 10
+W+G+S S
Sbjct: 1821 FWNGKSHS 1828
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 3 YWDGR 7
YW GR
Sbjct: 198 YWQGR 202
>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 3 YWDGR 7
YW GR
Sbjct: 198 YWQGR 202
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 WDGRSL 9
WD RSL
Sbjct: 420 WDFRSL 425
>sp|B9_HHV6Z|PROTEIN B9|Human herpesvirus 6B (strain Z29)
Query: 2 KYWDGRS 8
K W GRS
Sbjct: 94 KKWPGRS 100
>sp|VE6_HPV10|PROTEIN E6|Human papillomavirus type 10
Query: 2 KYWD 5
KYWD
Sbjct: 76 KYWD 79
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 4 WDGRSLS 10
W G+SLS
Sbjct: 14 WFGQSLS 20
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 WDGRSLS 10
W G+SLS
Sbjct: 14 WFGQSLS 20
13|SequenceR|70|61|LLIEKTKYWD
>sp|VP30_EBOSU|TRANSCRIPTIONAL activator VP30|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 LLIEKTKYW 9
LL+E ++W
Sbjct: 146 LLVETAEFW 154
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LIEKTKYW 9
+E+T +W
Sbjct: 305 FVERTTFW 312
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 LIEKTKYW 9
L KTK+W
Sbjct: 1301 LSTKTKFW 1308
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 LIEKTKYW 9
L KTK+W
Sbjct: 1302 LSTKTKFW 1309
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 LIEKTKYW 9
L KTK+W
Sbjct: 1211 LSTKTKFW 1218
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 5 KTKYW 9
KTK+W
Sbjct: 585 KTKWW 589
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 5 KTKYW 9
KTK+W
Sbjct: 585 KTKWW 589
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 5 KTKYW 9
KTK+W
Sbjct: 585 KTKWW 589
>sp|NSP3_ROTJ1|NON-STRUCTURAL protein 3|Rotavirus X (strain
Query: 2 LIEKTKY 8
L+EKT+Y
Sbjct: 137 LLEKTRY 143
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 1 LLIEKTKYWD 10
LLIE T+Y +
Sbjct: 409 LLIEDTEYLE 418
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 LLIEKTKY 8
LLI K KY
Sbjct: 899 LLITKKKY 906
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 LLIEKTKY 8
LLI K KY
Sbjct: 899 LLITKKKY 906
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 LLIEKTKY 8
LLI K KY
Sbjct: 939 LLIAKKKY 946
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 LLIEKTKY 8
LLI K KY
Sbjct: 939 LLIAKKKY 946
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 LLIEKTKY 8
LLI K KY
Sbjct: 934 LLIAKKKY 941
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 LLIEKTKY 8
LLI K KY
Sbjct: 934 LLIAKKKY 941
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 LLIEKTKY 8
LLI K KY
Sbjct: 934 LLIAKKKY 941
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 LLIEKTKY 8
LLI K KY
Sbjct: 934 LLIAKKKY 941
14|SequenceR|75|66|WDPGKLLIEK
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 WDPGKLLIE 9
W+P K+L+E
Sbjct: 1722 WNPCKMLME 1730
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 DPGKLLIE 9
DP KL++E
Sbjct: 45 DPAKLMLE 52
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 DPGKLLIE 9
DP KL++E
Sbjct: 45 DPAKLMLE 52
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 WDPGKLL 7
W P KL+
Sbjct: 1709 WQPAKLM 1715
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 WDPGKLL 7
W P KL+
Sbjct: 1709 WQPAKLM 1715
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 350 PGCMLIQK 357
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 337 PGCMLIQK 344
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 337 PGCMLIQK 344
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 337 PGCMLIQK 344
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 350 PGCMLIQK 357
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 337 PGCMLIQK 344
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 343 PGCMLIQK 350
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 337 PGCMLIQK 344
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 337 PGCMLIQK 344
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 343 PGCMLIQK 350
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 336 PGCMLIQK 343
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 336 PGCMLIQK 343
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 336 PGCMLIQK 343
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 337 PGCMLIQK 344
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 349 PGCMLIQK 356
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 DPGKLLIE 9
D GKLL E
Sbjct: 1111 DSGKLLSE 1118
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 DPGKLLIE 9
D GKLL E
Sbjct: 1111 DSGKLLSE 1118
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 3 PGKLLIEK 10
PG +LI+K
Sbjct: 336 PGCMLIQK 343
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 WDPGKL 6
W PGK+
Sbjct: 732 WFPGKV 737
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 2 DPGKLLIE 9
DPG+L ++
Sbjct: 34 DPGELALD 41
15|SequenceR|80|71|IEGLIWDPGK
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 1 IEGLIWDPG 9
+EG++W PG
Sbjct: 452 LEGVVWRPG 460
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 1 IEGLIWDPGK 10
+EG++W PG+
Sbjct: 451 LEGVVWRPGE 460
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 1 IEGLIWDPGK 10
+EG++W PG+
Sbjct: 451 LEGVVWCPGE 460
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 5 IWDPGK 10
IW PGK
Sbjct: 731 IWFPGK 736
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 4 LIWDPGK 10
+ WDP K
Sbjct: 1832 ICWDPSK 1838
>sp|NEF_HV1MA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 IEGLIWDPGK 10
++GL+W P +
Sbjct: 100 LDGLVWSPKR 109
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 IEGLIW 6
IEG++W
Sbjct: 1966 IEGILW 1971
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 IEGLIW 6
IEG++W
Sbjct: 1966 IEGILW 1971
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 4 LIWDP 8
+IWDP
Sbjct: 353 MIWDP 357
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 IWDP 8
IWDP
Sbjct: 267 IWDP 270
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 IWDP 8
IWDP
Sbjct: 267 IWDP 270
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|E3GL_ADE06|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 6
Query: 5 IWDPG 9
IW PG
Sbjct: 68 IWQPG 72
>sp|E3GL_ADE05|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 5
Query: 5 IWDPG 9
IW PG
Sbjct: 69 IWQPG 73
>sp|E3GL_ADE02|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 2
Query: 5 IWDPG 9
IW PG
Sbjct: 68 IWQPG 72
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 4 LIWDP 8
+IWDP
Sbjct: 353 MIWDP 357
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 LIWDP 8
+IWDP
Sbjct: 353 MIWDP 357
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 4 LIWDP 8
+IWDP
Sbjct: 358 MIWDP 362
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 LIWDP 8
+IWDP
Sbjct: 353 MIWDP 357
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 4 LIWDP 8
+IWDP
Sbjct: 345 MIWDP 349
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 1 IEGLIWD 7
+EG WD
Sbjct: 152 VEGTAWD 158
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 LIWDP 8
+IWDP
Sbjct: 353 MIWDP 357
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 LIWDP 8
+IWDP
Sbjct: 353 MIWDP 357
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 4 LIWDP 8
+IWDP
Sbjct: 353 MIWDP 357
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 4 LIWDP 8
+IWDP
Sbjct: 357 MIWDP 361
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 4 LIWDP 8
+IWDP
Sbjct: 353 MIWDP 357
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 4 LIWDP 8
+IWDP
Sbjct: 358 MIWDP 362
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 4 LIWDP 8
+IWDP
Sbjct: 354 MIWDP 358
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 LIWDP 8
+IWDP
Sbjct: 354 MIWDP 358
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 4 LIWDP 8
+IWDP
Sbjct: 353 MIWDP 357
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 5 IWDPG 9
+W+PG
Sbjct: 235 LWEPG 239
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 IWDPG 9
+W+PG
Sbjct: 235 LWEPG 239
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 IWDPG 9
+W+PG
Sbjct: 235 LWEPG 239
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 5 IWDPG 9
+W+PG
Sbjct: 235 LWEPG 239
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 IEGLIW 6
+EGLIW
Sbjct: 103 LEGLIW 108
>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 IEGLIWD 7
+EGLIW
Sbjct: 98 LEGLIWS 104
>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 IEGLIW 6
+EGLIW
Sbjct: 101 LEGLIW 106
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 4 LIWDP 8
+IWDP
Sbjct: 373 MIWDP 377
>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 IEGLIW 6
+EGLIW
Sbjct: 98 LEGLIW 103
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 EGLIWD 7
EGLI+D
Sbjct: 1221 EGLIYD 1226
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 EGLIWD 7
EGLI+D
Sbjct: 1221 EGLIYD 1226
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 EGLIWD 7
EGLI+D
Sbjct: 1221 EGLIYD 1226
>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)
Query: 1 IEGLIW 6
+EG++W
Sbjct: 97 VEGVVW 102
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 IEGLIW 6
+EG++W
Sbjct: 467 LEGVVW 472
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 EGLIWDP 8
+GL++DP
Sbjct: 1643 KGLLFDP 1649
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 IEGLIWDPGK 10
I+ +W P K
Sbjct: 1704 IDTQLWQPAK 1713
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 IEGLIWDPGK 10
I+ +W P K
Sbjct: 1704 IDTQLWQPAK 1713
>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 IEGLIW 6
+EGL+W
Sbjct: 98 LEGLVW 103
>sp|NEF_HV1YF|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 IEGLIW 6
+EGL+W
Sbjct: 103 LEGLVW 108
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LIWDPG 9
++W PG
Sbjct: 90 VVWPPG 95
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LIWDPG 9
++W PG
Sbjct: 90 VVWPPG 95
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GLIWDPGK 10
GL WD G+
Sbjct: 258 GLGWDTGR 265
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GLIWDPGK 10
GL WD G+
Sbjct: 258 GLGWDTGR 265
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GLIWDPGK 10
GL WD G+
Sbjct: 258 GLGWDTGR 265
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 IEGLIWD 7
+EG+I+D
Sbjct: 1457 LEGIIYD 1463
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 IEGLIW 6
+EG++W
Sbjct: 452 LEGVVW 457
>sp|BDL35_EBVB9|LATE gene expression regulator BDLF3.5|Epstein-Barr virus (strain
Query: 2 EGLIWDP 8
E L WDP
Sbjct: 24 ELLSWDP 30
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 2 EGLIWDP 8
EG+ W P
Sbjct: 128 EGVNWSP 134
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 2 EGLIWDP 8
EG+ W P
Sbjct: 115 EGVNWSP 121
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 2 EGLIWDP 8
EG+ W P
Sbjct: 115 EGVNWSP 121
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 EGLIWDP 8
EG+ W P
Sbjct: 115 EGVNWSP 121
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 2 EGLIWDP 8
EG+ W P
Sbjct: 115 EGVNWSP 121
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 EGLIWDP 8
EG+ W P
Sbjct: 128 EGVNWSP 134
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 2 EGLIWDP 8
EG+ W P
Sbjct: 127 EGVNWSP 133
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 2 EGLIWDP 8
EG+ W P
Sbjct: 115 EGVNWSP 121
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 2 EGLIWDP 8
EG+ W P
Sbjct: 121 EGVNWSP 127
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 2 EGLIWDP 8
EG+ W P
Sbjct: 114 EGVNWSP 120
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 2 EGLIWDP 8
EG+ W P
Sbjct: 114 EGVNWSP 120
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 EGLIWDP 8
EG+ W P
Sbjct: 114 EGVNWSP 120
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 2 EGLIWDP 8
EG+ W P
Sbjct: 115 EGVNWSP 121
16|SequenceR|85|76|LGSTKIEGLI
>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P
Query: 1 LGSTKIEGLI 10
LG+ KI G+I
Sbjct: 90 LGNDKIRGVI 99
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 LGSTKIEGL 9
+G+T I+GL
Sbjct: 518 VGTTDIKGL 526
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 LGSTKIEG 8
+GST IEG
Sbjct: 2458 VGSTLIEG 2465
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 2 GSTKIEGL 9
GST EGL
Sbjct: 6 GSTSKEGL 13
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 2 GSTKIEGL 9
GST EGL
Sbjct: 6 GSTSKEGL 13
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 GSTKIEGL 9
GST EGL
Sbjct: 6 GSTSKEGL 13
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 2 GSTKIEGL 9
GST EGL
Sbjct: 6 GSTSKEGL 13
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 4 TKIEGLI 10
TK+EGL+
Sbjct: 542 TKLEGLL 548
17|SequenceR|90|81|GGRGRLGSTK
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 GGRGRLG 7
GG GR+G
Sbjct: 1673 GGNGRVG 1679
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 1 GGRGRLGS 8
GGR ++GS
Sbjct: 311 GGRDKIGS 318
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 3 RGRLGSTK 10
RGRLG ++
Sbjct: 781 RGRLGLSR 788
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 3 RGRLGSTK 10
RGRLG ++
Sbjct: 781 RGRLGLSR 788
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 3 RGRLGSTK 10
RGRLG ++
Sbjct: 781 RGRLGLSR 788
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 3 RGRLGSTK 10
RGRLG ++
Sbjct: 781 RGRLGLSR 788
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 RGRLGSTK 10
RGRLG ++
Sbjct: 787 RGRLGLSR 794
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 RGRLGSTK 10
RGRLG ++
Sbjct: 794 RGRLGLSR 801
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 RGRLGSTK 10
RGRLG ++
Sbjct: 794 RGRLGLSR 801
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 GGRGRLGST 9
GGR +G+T
Sbjct: 1124 GGRQLIGAT 1132
18|SequenceR|95|86|TPFGAGGRGR
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 TPFGAGGRGR 10
TP+G GGR R
Sbjct: 831 TPYGLGGRMR 840
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 TPFGAGGRGR 10
TP+G GGR R
Sbjct: 831 TPYGLGGRMR 840
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 2 PFGAGGRGR 10
PFGA G GR
Sbjct: 69 PFGAPGSGR 77
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 PFGAGGRG 9
P G GGRG
Sbjct: 206 PRGVGGRG 213
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 PFGAGGRG 9
P G GGRG
Sbjct: 206 PRGVGGRG 213
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 PFGAGGRG 9
P G GGRG
Sbjct: 206 PRGVGGRG 213
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 PFGAGGRGR 10
PFGAG G+
Sbjct: 1000 PFGAGRPGQ 1008
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 PFGAGGRGR 10
PFGAG G+
Sbjct: 999 PFGAGRPGQ 1007
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 PFGAGGRGR 10
PFGAG G+
Sbjct: 1000 PFGAGRPGQ 1008
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 PFGAGGRGR 10
PFGAG G+
Sbjct: 1000 PFGAGRPGQ 1008
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 PFGAGGRGR 10
PFGAG G+
Sbjct: 999 PFGAGRPGQ 1007
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 PFGAGGRGR 10
PFGAG G+
Sbjct: 999 PFGAGRPGQ 1007
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 4 GAGGRGR 10
G GG+GR
Sbjct: 156 GGGGQGR 162
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 2 PFGAGGRGR 10
P G+ G GR
Sbjct: 70 PLGSAGSGR 78
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 2 PFGAGGR 8
P G GGR
Sbjct: 73 PLGGGGR 79
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 TPFGAGGR 8
TP G GGR
Sbjct: 733 TPQGRGGR 740
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 1 TPFGAGGR 8
TP AGGR
Sbjct: 149 TPIVAGGR 156
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TPFGAGG 7
TPF GG
Sbjct: 140 TPFSQGG 146
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 PFGAGGRG 9
P G GG+G
Sbjct: 203 PRGVGGKG 210
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 PFGAGGRG 9
P G GG+G
Sbjct: 203 PRGVGGKG 210
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 PFGAGGRG 9
P G GG+G
Sbjct: 203 PRGVGGKG 210
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 4 GAGGRGR 10
G GG GR
Sbjct: 159 GGGGHGR 165
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 PFGAGGRG 9
P G GG+G
Sbjct: 202 PRGVGGKG 209
>sp|X_HBVC8|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 PFGAGGRG 9
P G GG+G
Sbjct: 201 PRGVGGKG 208
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 PFGAGGRG 9
P G GG+G
Sbjct: 201 PRGVGGKG 208
>sp|DR5_HHV6U|UNCHARACTERIZED protein DR5|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PFGAGGRGR 10
P GA GRGR
Sbjct: 69 PIGARGRGR 77
>sp|X_HBVF1|PROTEIN X|Hepatitis B virus genotype F2
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PIGAESRGR 28
>sp|X_HBVD4|PROTEIN X|Hepatitis B virus genotype D
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 2 PFGAGGR 8
P G GGR
Sbjct: 73 PLGGGGR 79
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 2 PFGAGGR 8
P G GGR
Sbjct: 73 PLGGGGR 79
>sp|X_HBVC9|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVA4|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 PFGAGGRG 9
PFG+G G
Sbjct: 1293 PFGSGLSG 1300
>sp|X_HBVC0|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVA7|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVD6|PROTEIN X|Hepatitis B virus genotype D
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVD3|PROTEIN X|Hepatitis B virus genotype D
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVA6|PROTEIN X|Hepatitis B virus genotype A1
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVA3|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVA8|PROTEIN X|Hepatitis B virus genotype A3
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVA2|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 2 PFGAGGR 8
P G GGR
Sbjct: 73 PLGGGGR 79
>sp|X_HBVF2|PROTEIN X|Hepatitis B virus genotype F1
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVD2|PROTEIN X|Hepatitis B virus genotype D
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVC3|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVB8|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|NP_ADE05|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus C serotype 5
Query: 2 PFGAGGRGR 10
P+GA RGR
Sbjct: 43 PWGAHKRGR 51
>sp|NP_ADE02|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus C serotype 2
Query: 2 PFGAGGRGR 10
P+GA RGR
Sbjct: 43 PWGAHKRGR 51
>sp|X_HBVB7|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVB2|PROTEIN X|Hepatitis B virus genotype B2
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 FGAGGRGR 10
FG GG R
Sbjct: 60 FGGGGANR 67
>sp|RNB_HHV2H|PROBABLE RNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 TPFGAGGR 8
TP GAG R
Sbjct: 12 TPVGAGSR 19
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TPFGAGG 7
TPF GG
Sbjct: 140 TPFQQGG 146
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TPFGAGG 7
TPF GG
Sbjct: 140 TPFQQGG 146
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TPFGAGG 7
TPF GG
Sbjct: 140 TPFQQGG 146
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TPFGAGG 7
TPF GG
Sbjct: 140 TPFQQGG 146
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TPFGAGG 7
TPF GG
Sbjct: 140 TPFQQGG 146
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TPFGAGG 7
TPF GG
Sbjct: 140 TPFQQGG 146
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TPFGAGG 7
TPF GG
Sbjct: 140 TPFQQGG 146
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TPFGAGG 7
TPF GG
Sbjct: 119 TPFQQGG 125
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TPFGAGG 7
TPF GG
Sbjct: 140 TPFQQGG 146
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TPFGAGG 7
TPF GG
Sbjct: 140 TPFQQGG 146
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TPFGAGG 7
TPF GG
Sbjct: 140 TPFQQGG 146
>sp|X_HBVC7|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVC2|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVD7|PROTEIN X|Hepatitis B virus genotype D
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVC5|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVF4|PROTEIN X|Hepatitis B virus genotype F2
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVCJ|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVC1|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVD5|PROTEIN X|Hepatitis B virus genotype D
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVB1|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 TPFGAG 6
TPFG G
Sbjct: 728 TPFGKG 733
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 1 TPFGAGGRGR 10
T G GG GR
Sbjct: 489 TQHGLGGTGR 498
>sp|X_HBVB6|PROTEIN X|Hepatitis B virus genotype B2
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVB5|PROTEIN X|Hepatitis B virus genotype B2
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|X_HBVB3|PROTEIN X|Hepatitis B virus genotype B2
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 PFGAGGR 8
PFGAG +
Sbjct: 1251 PFGAGDK 1257
>sp|X_HBVB4|PROTEIN X|Hepatitis B virus genotype B/C
Query: 2 PFGAGGRGR 10
P GA RGR
Sbjct: 20 PVGAESRGR 28
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 TPFGAG 6
TPFG G
Sbjct: 729 TPFGKG 734
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 PFGAGGRG 9
P G G RG
Sbjct: 216 PRGVGARG 223
>sp|K42_HHV8P|PROTEIN K4.2|Human herpesvirus 8 type P
Query: 3 FGAGGRGR 10
FG GGRG
Sbjct: 117 FGGGGRGE 124
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 FGAGGRG 9
+G GG+G
Sbjct: 61 YGPGGQG 67
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 1 TPFGAGGRGR 10
TP G GG R
Sbjct: 69 TPLGEGGGVR 78
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TPFGAGGR 8
TP A GR
Sbjct: 2957 TPIAAAGR 2964
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 2 PFGAGGRGR 10
P GA GR R
Sbjct: 502 PAGAAGRTR 510
19|SequenceR|100|91|SWKLGTPFGA
>sp|VE6_HPV94|PROTEIN E6|Human papillomavirus type 94
Query: 2 WKLGTPFGA 10
WK G P+GA
Sbjct: 53 WKAGVPYGA 61
>sp|VE6_HPV29|PROTEIN E6|Human papillomavirus 29
Query: 2 WKLGTPFGA 10
WK G P+GA
Sbjct: 53 WKSGAPYGA 61
>sp|VE6_HPV28|PROTEIN E6|Human papillomavirus 28
Query: 2 WKLGTPFGA 10
W+ G P+GA
Sbjct: 51 WRTGAPYGA 59
>sp|VE6_HPV10|PROTEIN E6|Human papillomavirus type 10
Query: 2 WKLGTPFGA 10
W+ G P+GA
Sbjct: 53 WRAGVPYGA 61
>sp|VE6_HPV03|PROTEIN E6|Human papillomavirus 3
Query: 2 WKLGTPFGA 10
W+ G P+GA
Sbjct: 57 WRRGAPYGA 65
>sp|VE6_HPV27|PROTEIN E6|Human papillomavirus 27
Query: 2 WKLGTPFGA 10
W+ G PFGA
Sbjct: 59 WRKGFPFGA 67
>sp|VE6_HPV57|PROTEIN E6|Human papillomavirus 57
Query: 2 WKLGTPFGA 10
W+ G P+GA
Sbjct: 53 WRKGFPYGA 61
>sp|VE6_HPV2A|PROTEIN E6|Human papillomavirus type 2a
Query: 2 WKLGTPFGA 10
W+ G PFGA
Sbjct: 53 WRKGFPFGA 61
>sp|VE6_HPV43|PROTEIN E6|Human papillomavirus 43
Query: 2 WKLGTPFGA 10
W+ G PF A
Sbjct: 55 WRDGYPFAA 63
>sp|VP2_SVM93|MINOR capsid protein VP2|Sapporo virus (strain Human/United
Query: 1 SWKLGTPFG 9
++K GTPFG
Sbjct: 127 TFKNGTPFG 135
>sp|VE6_HPV32|PROTEIN E6|Human papillomavirus type 32
Query: 2 WKLGTPFGA 10
WK G P+ A
Sbjct: 55 WKKGFPYAA 63
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 1 SWKLGT 6
+WKLGT
Sbjct: 134 NWKLGT 139
>sp|NSS_SFSV|NON-STRUCTURAL protein NS-S|Sandfly fever sicilian virus (SFS)
Query: 1 SWKLGTP 7
SW LG P
Sbjct: 124 SWPLGIP 130
>sp|NSS_RVFVZ|NON-STRUCTURAL protein S|Rift valley fever virus (strain
Query: 1 SWKLGTP 7
SW LG P
Sbjct: 112 SWPLGEP 118
>sp|VP2_SVSAP|MINOR capsid protein VP2|Sapporo virus (isolate
Query: 1 SWKLGTPFG 9
++K GTPFG
Sbjct: 127 TFKNGTPFG 135
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SWKLGTP 7
SW++G P
Sbjct: 5490 SWEVGKP 5496
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SWKLGTP 7
SW++G P
Sbjct: 5467 SWEVGKP 5473
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 WKLGTPFG 9
W LG P G
Sbjct: 509 WFLGLPIG 516
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 4 LGTPFGA 10
LGT FGA
Sbjct: 1037 LGTAFGA 1043
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 6 TPFGA 10
TPFGA
Sbjct: 1455 TPFGA 1459
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 2 WKLGTPFGA 10
W +GTP A
Sbjct: 167 WGMGTPCNA 175
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 SWKLGTPF 8
+WK+ PF
Sbjct: 425 TWKIIKPF 432
>sp|VE6_HPV48|PROTEIN E6|Human papillomavirus type 48
Query: 2 WKLGTPFG 9
W+ TPF
Sbjct: 51 WRDNTPFA 58
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 4 LGTPFGA 10
LG+PF A
Sbjct: 28 LGSPFDA 34
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 4 LGTPFGA 10
LG+PF A
Sbjct: 28 LGSPFDA 34
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 2 WKLGT 6
W+LGT
Sbjct: 5 WQLGT 9
>sp|REX_HTL3P|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 3 KLGTPFGA 10
K TP+GA
Sbjct: 161 KTSTPYGA 168
>sp|VE6_HPV61|PROTEIN E6|Human papillomavirus type 61
Query: 2 WKLGTPFG 9
W+ PFG
Sbjct: 51 WRHNWPFG 58
20|SequenceR|105|96|PKNMFSWKLG
>sp|UL108_HCMVA|UNCHARACTERIZED protein UL108|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PKNMFSW 7
PKN+ SW
Sbjct: 39 PKNIISW 45
>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NMFSW 7
N+FSW
Sbjct: 107 NLFSW 111
>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 NMFSW 7
N+FSW
Sbjct: 107 NLFSW 111
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 KNMFSW 7
KN+F+W
Sbjct: 659 KNVFNW 664
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 KNMFSW 7
KN+F+W
Sbjct: 659 KNVFNW 664
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 KNMFSW 7
KN+F W
Sbjct: 662 KNLFDW 667
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 KNMFSW 7
KN+F W
Sbjct: 662 KNLFDW 667
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 KNMFSW 7
KN+F W
Sbjct: 662 KNLFDW 667
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 3 NMFSWK 8
N F+WK
Sbjct: 297 NTFTWK 302
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 KNMFSW 7
KN+F W
Sbjct: 662 KNLFDW 667
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 KNMFSW 7
KN+F W
Sbjct: 662 KNLFDW 667
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 3 NMFSWKL 9
N+FSW +
Sbjct: 76 NVFSWNI 82
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 3 NMFSWKL 9
N+F+W L
Sbjct: 306 NVFAWAL 312
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 3 NMFSWKL 9
N+F+W L
Sbjct: 306 NVFAWAL 312
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 3 NMFSWKL 9
N+F+W L
Sbjct: 306 NVFAWAL 312
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 3 NMFSWKL 9
N+F+W L
Sbjct: 306 NVFAWAL 312
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 3 NMFSWKL 9
N+F+W L
Sbjct: 306 NVFAWAL 312
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 3 NMFSWKL 9
N+F+W L
Sbjct: 306 NVFAWAL 312
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 KNMFSWKL 9
KN F W L
Sbjct: 654 KNFFIWTL 661
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 KNMFSWK 8
+N F+WK
Sbjct: 1208 ENAFAWK 1214
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 3 NMFSWKL 9
N+FSW +
Sbjct: 109 NVFSWDI 115
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 NMFSWKL 9
N+FSW +
Sbjct: 109 NVFSWDI 115
>sp|UL132_HCMVT|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PKNMFSWKL 9
P N SW++
Sbjct: 243 PSNSTSWQI 251
>sp|UL132_HCMVM|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PKNMFSWKL 9
P N SW++
Sbjct: 243 PSNSTSWQI 251
>sp|UL132_HCMVA|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PKNMFSWKL 9
P N SW++
Sbjct: 243 PSNSTSWQI 251
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 NMFSW 7
N+FSW
Sbjct: 672 NVFSW 676
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 3 NMFSW 7
N+FSW
Sbjct: 672 NVFSW 676
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 3 NMFSW 7
N+FSW
Sbjct: 672 NVFSW 676
>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)
Query: 1 PKNMFSW 7
P+N+ SW
Sbjct: 68 PQNVHSW 74
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 KNMFSWKL 9
KN+ SW++
Sbjct: 1261 KNVLSWEV 1268
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 KNMFSWKL 9
KN +WK+
Sbjct: 664 KNFTTWKI 671
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 KNMFSW 7
+N+F+W
Sbjct: 659 RNVFNW 664
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 KNMFSW 7
+N+F+W
Sbjct: 659 RNVFNW 664
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 1 PKNMFSWKLG 10
P+N ++ K+G
Sbjct: 460 PENQYTVKIG 469
21|SequenceR|110|101|PRGDSPKNMF
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PRGDSPKNM 9
P G+SPK M
Sbjct: 620 PIGESPKGM 628
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 PRGDSPKNM 9
P G+SPK M
Sbjct: 620 PIGESPKGM 628
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 2 RGDSPKN 8
RG +PKN
Sbjct: 273 RGSAPKN 279
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GDSPKNM 9
GD PKN+
Sbjct: 898 GDHPKNL 904
Query: 1 PRGDSPK 7
P GDSP+
Sbjct: 455 PLGDSPQ 461
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GDSPKNM 9
GD PKN+
Sbjct: 898 GDHPKNL 904
Query: 1 PRGDSPK 7
P GDSP+
Sbjct: 455 PLGDSPQ 461
>sp|NCAP_SFSV|NUCLEOPROTEIN fever sicilian virus (SFS)
Query: 2 RGDSPKNM 9
RG+ PK M
Sbjct: 64 RGNKPKKM 71
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GDSPKNMF 10
GD+P N+F
Sbjct: 590 GDTPINIF 597
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PRGDSPKN 8
P G+ P+N
Sbjct: 104 PEGNRPRN 111
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 PRGDSPKN 8
P G+ P+N
Sbjct: 104 PEGNRPRN 111
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GDSPKNMF 10
GD+P N+F
Sbjct: 590 GDTPINIF 597
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GDSPKNMF 10
GD+P N+F
Sbjct: 591 GDTPINIF 598
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GDSPKNMF 10
GD+P N+F
Sbjct: 589 GDTPINIF 596
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GDSPKNMF 10
GD+P N+F
Sbjct: 591 GDTPINIF 598
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GDSPKNMF 10
GD+P N+F
Sbjct: 590 GDTPINIF 597
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GDSPKNMF 10
GD+P N+F
Sbjct: 588 GDTPINIF 595
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GDSPKNMF 10
GD+P N+F
Sbjct: 588 GDTPINIF 595
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 5 SPKNMF 10
SPKN+F
Sbjct: 11 SPKNVF 16
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas)
Query: 5 SPKNMF 10
SPKN+F
Sbjct: 11 SPKNVF 16
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GDSPKNMF 10
GD+P N+F
Sbjct: 590 GDTPINIF 597
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GDSPKNMF 10
GD+P N+F
Sbjct: 590 GDTPINIF 597
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PRGDSPKN 8
PRG P+N
Sbjct: 437 PRGKQPRN 444
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PRGDSPKN 8
PRG P+N
Sbjct: 437 PRGKKPRN 444
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GDSPKNMF 10
GD+P N+F
Sbjct: 589 GDTPINIF 596
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GDSPKNMF 10
GD+P N+F
Sbjct: 590 GDTPINIF 597
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 3 GDSPKNM 9
GD P+NM
Sbjct: 162 GDVPQNM 168
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 300 GDTPRN 305
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PVGESPKGV 628
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 3 GDSPKN 8
GD+P+N
Sbjct: 323 GDTPRN 328
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PRGDSPK 7
P GD PK
Sbjct: 2768 PPGDPPK 2774
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 PRGDSPK 7
P GD PK
Sbjct: 2791 PPGDPPK 2797
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 PRGDSPK 7
P GD PK
Sbjct: 2795 PPGDPPK 2801
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 616 PIGESPKGV 624
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 597 PIGESPKGV 605
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 613 PIGESPKGV 621
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 613 PIGESPKGV 621
>sp|PA_I01A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 143 PIGESPKGV 151
>sp|PA_I01A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 143 PIGESPKGV 151
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 PRGDSPKNM 9
P G+SPK +
Sbjct: 620 PIGESPKGV 628
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GDSPKNMF 10
G SP+N+F
Sbjct: 531 GVSPRNVF 538
22|SequenceR|115|106|VVLYKPRGDS
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 2 VLYKPRG 8
+ YKPRG
Sbjct: 190 IYYKPRG 196
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 1 VVLYKPR 7
VVLYK R
Sbjct: 41 VVLYKAR 47
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 2 VLYKPRGDS 10
V+++P GD+
Sbjct: 34 VVFRPPGDN 42
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 1 VVLYKPRGDS 10
VVLYK R ++
Sbjct: 41 VVLYKARQNN 50
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 3 LYKPRGD 9
LY RGD
Sbjct: 303 LYSTRGD 309
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 YKPRGDS 10
Y P GD+
Sbjct: 633 YNPEGDT 639
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 3 LYKPRG 8
LYKP G
Sbjct: 345 LYKPTG 350
>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VVLYKP 6
++LYKP
Sbjct: 101 MILYKP 106
>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VVLYKP 6
++LYKP
Sbjct: 101 MILYKP 106
>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VVLYKP 6
++LYKP
Sbjct: 101 MILYKP 106
>sp|VU26_HHV7J|PROTEIN U26|Human herpesvirus 7 (strain JI)
Query: 3 LYKPRG 8
+YKP G
Sbjct: 166 IYKPNG 171
23|SequenceR|120|111|GEDANVVLYK
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 GEDANVVLYK 10
GE AN++LY+
Sbjct: 723 GEKANILLYQ 732
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 GEDANVVLYK 10
GE AN++LY+
Sbjct: 723 GEKANILLYQ 732
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 GEDANVVLYK 10
GE AN++LY+
Sbjct: 723 GEKANILLYQ 732
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 GEDANVVLYK 10
GE AN++LY+
Sbjct: 723 GEKANILLYQ 732
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 5 NVVLYK 10
NVVLYK
Sbjct: 40 NVVLYK 45
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 DANVVLY 9
DA+VV+Y
Sbjct: 1468 DADVVIY 1474
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 3 DANVVLY 9
DA+VV+Y
Sbjct: 136 DADVVIY 142
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 DANVVLY 9
DA+VV+Y
Sbjct: 1467 DADVVIY 1473
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 DANVVLY 9
DA+VV+Y
Sbjct: 1469 DADVVIY 1475
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 DANVVLY 9
DA+VV+Y
Sbjct: 1469 DADVVIY 1475
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 DANVVLY 9
DA+VV+Y
Sbjct: 1469 DADVVIY 1475
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 DANVVLY 9
DA+VV+Y
Sbjct: 1468 DADVVIY 1474
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 DANVVLY 9
DA+VV+Y
Sbjct: 1469 DADVVIY 1475
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 DANVVLY 9
DA+VV+Y
Sbjct: 1469 DADVVIY 1475
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 3 DANVVLY 9
D+N VLY
Sbjct: 123 DSNAVLY 129
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 DANVVLYK 10
DA++ LYK
Sbjct: 717 DAHIPLYK 724
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 DANVVLYK 10
DA++ LYK
Sbjct: 717 DAHIPLYK 724
24|SequenceR|125|116|CTGPEGEDAN
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 CTGPEGEDA 9
C P GE+A
Sbjct: 986 CVDPAGEEA 994
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 1 CTGPEGEDAN 10
CT PEG N
Sbjct: 451 CTNPEGTHIN 460
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 TGPEGED 8
TGP G+D
Sbjct: 336 TGPAGKD 342
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GPEGE 7
GPEGE
Sbjct: 420 GPEGE 424
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GPEGE 7
GPEGE
Sbjct: 420 GPEGE 424
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 3 GPEGEDAN 10
GP GED N
Sbjct: 212 GPIGEDPN 219
>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PEGEDAN 10
P+G+D N
Sbjct: 47 PDGQDVN 53
>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PEGEDAN 10
P+G+D N
Sbjct: 47 PDGQDVN 53
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 3 GPEGEDAN 10
GPEG+ N
Sbjct: 933 GPEGQGNN 940
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 5 EGEDAN 10
EGED N
Sbjct: 584 EGEDGN 589
>sp|C_PI1HE|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 2 TGPEGED 8
TGP GE+
Sbjct: 109 TGPLGEE 115
>sp|C_PI1HD|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 2 TGPEGED 8
TGP GE+
Sbjct: 109 TGPLGEE 115
>sp|C_PI1HC|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 2 TGPEGED 8
TGP GE+
Sbjct: 109 TGPLGEE 115
>sp|C_PI1HB|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 2 TGPEGED 8
TGP GE+
Sbjct: 109 TGPLGEE 115
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 5 EGEDAN 10
EGEDA+
Sbjct: 680 EGEDAD 685
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 TGPEGED 8
T P GED
Sbjct: 280 TAPHGED 286
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 CTGPEGE 7
CT P GE
Sbjct: 187 CTPPMGE 193
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 TGPEGED 8
T P GED
Sbjct: 273 TSPHGED 279
>sp|A28_MCV1|ENVELOPE protein A28 homolog|Molluscum contagiosum virus subtype 1
Query: 1 CTGPEGEDA 9
CT P G A
Sbjct: 123 CTDPNGAQA 131
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 TGPEGED 8
T P GED
Sbjct: 273 TSPHGED 279
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 5 EGEDAN 10
EGED N
Sbjct: 812 EGEDLN 817
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 5 EGEDAN 10
EGED N
Sbjct: 812 EGEDLN 817
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 TGPEGED 8
T P GED
Sbjct: 273 TSPHGED 279
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 TGPEGED 8
T P GED
Sbjct: 273 TSPHGED 279
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 1 CTGPEGE 7
CT P GE
Sbjct: 161 CTPPMGE 167
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 CTGPEGE 7
CT P GE
Sbjct: 189 CTPPMGE 195
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 1 CTGPEGE 7
CT P GE
Sbjct: 189 CTPPMGE 195
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 CTGPEGED 8
C+G +G D
Sbjct: 140 CSGDDGRD 147
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 3 GPEGED 8
GP GED
Sbjct: 334 GPGGED 339
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 CTGPEGEDAN 10
C G + D N
Sbjct: 855 CVGVDASDGN 864
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 5 EGEDAN 10
EGEDA+
Sbjct: 572 EGEDAS 577
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 1 CTGPEGE 7
CT P GE
Sbjct: 161 CTPPMGE 167
25|SequenceR|130|121|IERDKCTGPE
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 1 IERDKCTGP 9
I+ D C GP
Sbjct: 4 IDYDVCKGP 12
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 5 KCTGPE 10
KC GPE
Sbjct: 293 KCIGPE 298
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 IERDKCT 7
IER +CT
Sbjct: 575 IERARCT 581
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 6 CTGPE 10
CTGP+
Sbjct: 112 CTGPD 116
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 2 ERDKCTG 8
ER+ CTG
Sbjct: 10 EREGCTG 16
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 4 DKCTGPE 10
D CT PE
Sbjct: 226 DVCTSPE 232
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 IERDKC 6
+E+DKC
Sbjct: 310 LEQDKC 315
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 IERDKC 6
+E+DKC
Sbjct: 310 LEQDKC 315
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 IERDKC 6
+E+DKC
Sbjct: 310 LEQDKC 315
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 IERDKC 6
+E+DKC
Sbjct: 310 LEQDKC 315
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 IERDKC 6
+E+DKC
Sbjct: 310 LEQDKC 315
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 IERDKC 6
+E+DKC
Sbjct: 310 LEQDKC 315
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 IERDKC 6
+E+DKC
Sbjct: 310 LEQDKC 315
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 IERDKC 6
+E+DKC
Sbjct: 310 LEQDKC 315
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 IERDKC 6
+E+DKC
Sbjct: 310 LEQDKC 315
>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33
Query: 1 IERDKCT 7
IE D CT
Sbjct: 140 IEEDTCT 146
26|SequenceR|135|126|PDHRLIERDK
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 HRLIERDK 10
H+L+ RDK
Sbjct: 287 HKLLTRDK 294
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 HRLIERDK 10
H+L+ RD+
Sbjct: 286 HKLLTRDR 293
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 DHRLIERD 9
D RL+ RD
Sbjct: 426 DSRLLSRD 433
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 2 DHRLIERDK 10
DH LIE K
Sbjct: 298 DHMLIEPPK 306
27|SequenceR|140|131|ELLKHPDHRL
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LKHPDHR 9
L HPDHR
Sbjct: 182 LVHPDHR 188
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 LLKHPDH 8
LL HPDH
Sbjct: 609 LLLHPDH 615
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LKHPDHR 9
L HPDHR
Sbjct: 181 LVHPDHR 187
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 HPDHRL 10
HP+HRL
Sbjct: 189 HPNHRL 194
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LKHPDHR 9
L HPDHR
Sbjct: 182 LVHPDHR 188
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 ELLKHPD 7
+L+KHPD
Sbjct: 433 KLIKHPD 439
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 ELLKHPDHRL 10
E +KH DH L
Sbjct: 377 EAVKHDDHLL 386
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 ELLKHPDH 8
+L++H DH
Sbjct: 570 DLIRHADH 577
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 ELLKHPDHRL 10
E +KH DH L
Sbjct: 377 ESVKHDDHLL 386
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 ELLKHPDHRL 10
E +KH DH L
Sbjct: 377 ESVKHDDHLL 386
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 ELLKHPDHRL 10
E +KH DH L
Sbjct: 377 ESVKHDDHLL 386
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 ELLKHPDHRL 10
E +KH DH L
Sbjct: 377 EPVKHDDHLL 386
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 ELLKHPDHRL 10
E +KH DH L
Sbjct: 377 EPVKHDDHLL 386
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 1 ELLKHPDHRL 10
E +KH DH L
Sbjct: 377 EPVKHDDHLL 386
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 ELLKHPDH 8
+L++H DH
Sbjct: 570 DLIRHDDH 577
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 ELLKHPDHRL 10
+L++H DH +
Sbjct: 561 DLIRHTDHSV 570
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 5 HPDH 8
HPDH
Sbjct: 620 HPDH 623
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 5 HPDH 8
HPDH
Sbjct: 619 HPDH 622
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 5 HPDH 8
HPDH
Sbjct: 619 HPDH 622
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 5 HPDH 8
HPDH
Sbjct: 621 HPDH 624
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 5 HPDH 8
HPDH
Sbjct: 621 HPDH 624
>sp|SPI1_VACCC|SERINE proteinase inhibitor 1|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LLKHPDHRL 10
++KHPD +
Sbjct: 8 IVKHPDENV 16
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 ELLKHPDH 8
+L++H DH
Sbjct: 570 DLIRHDDH 577
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 HPDH 8
HPDH
Sbjct: 609 HPDH 612
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 ELLKHPDHR 9
E KH +HR
Sbjct: 2 EYWKHTNHR 10
>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 HPDHRL 10
HPD+R+
Sbjct: 123 HPDNRI 128
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 5 HPDH 8
HPDH
Sbjct: 576 HPDH 579
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 LKHPDHRL 10
L++P H+L
Sbjct: 72 LRYPGHKL 79
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 LLKHPD 7
L++HPD
Sbjct: 2276 LIQHPD 2281
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 5 HPDH 8
HPDH
Sbjct: 620 HPDH 623
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 HPDH 8
HPDH
Sbjct: 608 HPDH 611
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 ELLKHPD 7
ELL+ PD
Sbjct: 70 ELLEQPD 76
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 LLKHPDHR 9
L+KHP ++
Sbjct: 346 LIKHPRYK 353
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 4 KH-PDHRL 10
KH PDH+L
Sbjct: 148 KHTPDHKL 155
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDHRL 10
E+LK P H +
Sbjct: 897 EILKEPVHEV 906
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 5 HPDH 8
HPDH
Sbjct: 607 HPDH 610
>sp|US06_HCMVT|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 HPDHRL 10
HP HRL
Sbjct: 115 HPSHRL 120
>sp|US06_HCMVM|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 5 HPDHRL 10
HP HRL
Sbjct: 114 HPSHRL 119
>sp|US06_HCMVA|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 HPDHRL 10
HP HRL
Sbjct: 115 HPSHRL 120
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 LKHPDHRL 10
+KH DH L
Sbjct: 379 VKHDDHLL 386
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 3 LKHPDHRL 10
+KH DH L
Sbjct: 379 VKHDDHLL 386
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 LKHPDHRL 10
+KH DH L
Sbjct: 379 VKHDDHLL 386
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 LKHPDHRL 10
+KH DH L
Sbjct: 379 VKHDDHLL 386
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 LKHPDHRL 10
+KH DH L
Sbjct: 379 VKHDDHLL 386
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 LKHPDHRL 10
+KH DH L
Sbjct: 379 VKHDDHLL 386
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 LKHPDHRL 10
+KH DH L
Sbjct: 379 VKHDDHLL 386
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 895 EILKEPVH 902
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ELLKHPDH 8
+LL HP H
Sbjct: 505 QLLAHPHH 512
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 2 LLKHPDH 8
L KH DH
Sbjct: 306 LRKHSDH 312
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 892 EILKEPVH 899
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 900 EILKEPVH 907
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 ELLKHPDH 8
+LL HP H
Sbjct: 505 QLLAHPHH 512
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ELLKHPDH 8
+LL HP H
Sbjct: 506 QLLAHPHH 513
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 895 EILKEPVH 902
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 901 EILKEPVH 908
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 895 EILKEPVH 902
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 895 EILKEPVH 902
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 899 EILKEPVH 906
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 907 EILKEPVH 914
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 890 EILKEPVH 897
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LKHPDHR 9
L HP HR
Sbjct: 24 LMHPHHR 30
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 LKHPDHR 9
L HP HR
Sbjct: 24 LMHPHHR 30
>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P
Query: 1 ELLKHPD 7
E+LK PD
Sbjct: 398 EILKQPD 404
>sp|TAT_HV1AN|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 5 HPDHR 9
HPDH+
Sbjct: 60 HPDHK 64
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 894 EILKEPVH 901
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 899 EILKEPVH 906
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 907 EILKEPVH 914
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 5 HPDH 8
HPDH
Sbjct: 287 HPDH 290
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 896 EILKEPVH 903
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 896 EILKEPVH 903
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 895 EILKEPVH 902
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 907 EILKEPVH 914
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 891 EILKEPVH 898
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 894 EILKEPVH 901
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 895 EILKEPVH 902
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 890 EILKEPVH 897
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 ELLKHPDHRL 10
E KH DH L
Sbjct: 2159 EHFKHGDHVL 2168
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 890 EILKEPVH 897
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 892 EILKEPVH 899
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 895 EILKEPVH 902
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 896 EILKEPVH 903
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 892 EILKEPVH 899
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 905 EILKEPLH 912
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 LLKHPDH 8
+KH DH
Sbjct: 1181 FIKHNDH 1187
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 2 LLKHPDHR 9
LLKH D R
Sbjct: 403 LLKHRDVR 410
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 905 EILKEPLH 912
>sp|SPI1_VARV|SERINE proteinase inhibitor 1|Variola virus
Query: 2 LLKHPDHRL 10
+LK+PD +
Sbjct: 23 ILKYPDENV 31
>sp|SPI1_VAR67|SERINE proteinase inhibitor 1|Variola virus (isolate
Query: 2 LLKHPDHRL 10
+LK+PD +
Sbjct: 23 ILKYPDENV 31
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 4 KHPDHR 9
K PDHR
Sbjct: 22 KRPDHR 27
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 4 KHPDHR 9
K PDHR
Sbjct: 22 KRPDHR 27
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELLKHPDH 8
E+LK P H
Sbjct: 888 EILKDPVH 895
>sp|NEC1_HHV6U|NUCLEAR egress protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 KHPDHR 9
K PDHR
Sbjct: 22 KRPDHR 27
28|SequenceR|145|136|GVLCGELLKH
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 VLCGELLKH 10
VLC E LKH
Sbjct: 130 VLCEEHLKH 138
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 VLCGELL 8
VLCGEL+
Sbjct: 684 VLCGELV 690
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 VLCGELL--KH 10
+LCGE+L KH
Sbjct: 46 LLCGEILYAKH 56
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 4 CGELLKH 10
CG L KH
Sbjct: 156 CGRLYKH 162
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 4 CGELLKH 10
CG L KH
Sbjct: 226 CGRLYKH 232
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 LCGELLKH 10
LC EL+ H
Sbjct: 2040 LCKELIHH 2047
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 LCGELLKH 10
LC EL+ H
Sbjct: 2040 LCKELIHH 2047
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 LCGELLKH 10
LC EL+ H
Sbjct: 2040 LCKELIHH 2047
>sp|TEG7_HHV2H|TEGUMENT protein UL51|Human herpesvirus 2 (strain HG52)
Query: 1 GVLCG 5
GVLCG
Sbjct: 6 GVLCG 10
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GVLCGELLKH 10
G LC +++H
Sbjct: 57 GWLCATIMQH 66
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GVLCGELLKH 10
G LC +++H
Sbjct: 57 GWLCATIMQH 66
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 5 GELLKH 10
GE LKH
Sbjct: 312 GEFLKH 317
>sp|VP30_EBORR|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 GVLCGELLKH 10
G+LC L+H
Sbjct: 187 GLLCETHLRH 196
>sp|VP30_EBORE|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 GVLCGELLKH 10
G+LC L+H
Sbjct: 187 GLLCETHLRH 196
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 5 GELLKH 10
GELL H
Sbjct: 353 GELLNH 358
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 4 CGELLKH 10
C +++KH
Sbjct: 363 CAQMVKH 369
>sp|E3GL_ADE03|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 3 LCGELLK 9
LCG L+K
Sbjct: 48 LCGVLIK 54
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 VLCGELL 8
V+C ELL
Sbjct: 2128 VICDELL 2134
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 VLCGELL 8
V+C ELL
Sbjct: 2128 VICDELL 2134
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 1 GVLCG 5
GV+CG
Sbjct: 504 GVICG 508
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 GVLCG 5
GV+CG
Sbjct: 948 GVICG 952
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 GVLCG 5
GV+CG
Sbjct: 948 GVICG 952
29|SequenceR|150|141|GMARGGVLCG
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 3 ARGGVLCG 10
+RGG CG
Sbjct: 466 SRGGCRCG 473
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 RGGVLC 9
RGG LC
Sbjct: 1477 RGGALC 1482
>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)
Query: 3 ARGGVLC 9
ARG +LC
Sbjct: 87 ARGHILC 93
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 MARGGVLC 9
++ GG+LC
Sbjct: 77 LSDGGILC 84
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 5 GGVLCG 10
GGVLC
Sbjct: 1684 GGVLCA 1689
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 5 GGVLC 9
GGVLC
Sbjct: 1683 GGVLC 1687
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 RGGVLCG 10
RG V CG
Sbjct: 1198 RGAVSCG 1204
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 RGGVLCG 10
RG V CG
Sbjct: 1198 RGAVSCG 1204
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RGGVLC 9
RGG+ C
Sbjct: 100 RGGIYC 105
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 4 RGGVLC 9
RGG+ C
Sbjct: 100 RGGIYC 105
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 GMARGGVL 8
G+A+GGV
Sbjct: 1525 GVAQGGVF 1532
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 GMARGGVL 8
G+A+GGV
Sbjct: 1525 GVAQGGVF 1532
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 GMARGGVL 8
G+A+GGV
Sbjct: 1525 GVAQGGVF 1532
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 GMARGGVL 8
G+A+GGV
Sbjct: 1525 GVAQGGVF 1532
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 MARGGVLC 9
+ RG V+C
Sbjct: 1526 VTRGSVIC 1533
30|SequenceR|155|146|YAARAGMARG
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 3 ARAGMARG 10
AR+GM+RG
Sbjct: 118 ARSGMSRG 125
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 AARAGMARG 10
A AG+ARG
Sbjct: 1191 ATSAGIARG 1199
31|SequenceR|160|151|GRIYIYAARA
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GRIYIYA 7
GR+Y+Y+
Sbjct: 210 GRVYVYS 216
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GRIYIYA 7
GR+Y+Y+
Sbjct: 210 GRVYVYS 216
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 GRIYIYAA 8
GR+Y YA
Sbjct: 172 GRVYSYAG 179
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 GRIYIYAA 8
GR+Y YA
Sbjct: 171 GRVYWYAG 178
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 GRIYIYAAR 9
GRI YA R
Sbjct: 1911 GRIPTYAVR 1919
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 1 GRIYIYA 7
GR+Y+Y
Sbjct: 391 GRLYMYG 397
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 1 GRIYIYA 7
GR+Y+Y
Sbjct: 391 GRLYMYG 397
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 1 GRIYIYA 7
GR+Y+Y
Sbjct: 391 GRLYMYG 397
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 1 GRIYIYA 7
GR+Y+Y
Sbjct: 391 GRLYMYG 397
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GRIYIYAA 8
GR++IY +
Sbjct: 144 GRVHIYPS 151
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GRIYIYAA 8
GR++IY +
Sbjct: 144 GRVHIYPS 151
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 1 GRIYIY 6
GR++IY
Sbjct: 126 GRVHIY 131
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 GRIYIY 6
GR++IY
Sbjct: 126 GRVHIY 131
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 GRIYIY 6
GR++IY
Sbjct: 126 GRVHIY 131
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 GRIYIYAA 8
G +Y+Y+A
Sbjct: 82 GDMYVYSA 89
32|SequenceR|165|156|ENYFEGRIYI
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 2 NYFEGRIYI 10
+ F+GR+Y+
Sbjct: 156 DVFQGRLYL 164
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 ENYFEGRI 8
EN+F G++
Sbjct: 15 ENFFSGKL 22
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 ENYFEGRIY 9
+N FE +IY
Sbjct: 469 QNMFEKKIY 477
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 ENYFEG 6
ENYF G
Sbjct: 1402 ENYFHG 1407
>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ENYFEG 6
ENYF G
Sbjct: 300 ENYFTG 305
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ENYFEGRIYI 10
E+YF G+I +
Sbjct: 1090 ESYFVGQIQV 1099
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 YFEGRIY 9
++EG IY
Sbjct: 200 FYEGHIY 206
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 YFEGRIY 9
++EG IY
Sbjct: 199 FYEGHIY 205
>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 2 NYFEGRI 8
NY++GR+
Sbjct: 197 NYWQGRL 203
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 1 ENYFEGR 7
E+Y EGR
Sbjct: 109 EDYAEGR 115
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 NYFEGRIY 9
NY+ R+Y
Sbjct: 351 NYYNPRVY 358
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 2 NYFEGRIY 9
NY+ R+Y
Sbjct: 351 NYYNPRVY 358
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 5 EGRIYI 10
EGR+Y+
Sbjct: 395 EGRLYV 400
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 5 EGRIYI 10
EGR+Y+
Sbjct: 395 EGRLYV 400
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 2 NYFEGRI 8
NY++GR+
Sbjct: 197 NYWQGRL 203
>sp|PG029_VACCC|IFN signaling evasion protein OPG029|Vaccinia virus (strain
Query: 3 YFEGRIY 9
Y++G IY
Sbjct: 55 YYDGNIY 61
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 3 YFEGRI 8
Y++GRI
Sbjct: 837 YYDGRI 842
33|SequenceR|170|161|QLNSAENYFE
>sp|VE6_HPV60|PROTEIN E6|Human papillomavirus type 60
Query: 5 AENYFE 10
AENYF+
Sbjct: 75 AENYFQ 80
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 2 LNSAENYFE 10
LNSAEN E
Sbjct: 443 LNSAENLEE 451
34|SequenceR|175|166|ERIAVQLNSA
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 ERIAVQLNSA 10
ER+ QLNSA
Sbjct: 602 ERLKAQLNSA 611
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 ERIAVQLNSA 10
ER+ QLNSA
Sbjct: 601 ERLKAQLNSA 610
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 ERIAVQLNSA 10
ER+ QLNSA
Sbjct: 601 ERLKAQLNSA 610
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 ERIAVQLNSA 10
ER+ QLNSA
Sbjct: 601 ERLKAQLNSA 610
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 ERIAVQLNSA 10
ER+ QLNSA
Sbjct: 601 ERLKAQLNSA 610
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 ERIAVQLNSA 10
ER+ QLNSA
Sbjct: 602 ERLKAQLNSA 611
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 ERIAVQLNSA 10
ER+ QLNSA
Sbjct: 601 ERLKAQLNSA 610
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 ERIAVQLNSA 10
ER+ QLNSA
Sbjct: 601 ERLKAQLNSA 610
35|SequenceR|180|171|GAEYAERIAV
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 3 EYAERI 8
EY+ERI
Sbjct: 368 EYSERI 373
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GAEYAE 6
G EYAE
Sbjct: 925 GGEYAE 930
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GAEYAE 6
G EYAE
Sbjct: 925 GGEYAE 930
>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)
Query: 2 AEYAERIAV 10
AE+A+R A+
Sbjct: 398 AEFAQRFAL 406
>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann
Query: 2 AEYAERIAV 10
AE+A+R A+
Sbjct: 398 AEFAQRFAL 406
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 2 AEYAERIA 9
AE+A+R+A
Sbjct: 212 AEHADRLA 219
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 2 AEYAERIA 9
AE+A+R+A
Sbjct: 212 AEHADRLA 219
36|SequenceR|185|176|NKGILGAEYA
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 KGILGA 7
KG+LGA
Sbjct: 871 KGVLGA 876
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 KGILGAEYA 10
+G+LGA+ A
Sbjct: 1821 QGVLGAKSA 1829
37|SequenceR|190|181|GSGCANKGIL
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 GSGCANKGIL 10
G GC ++G++
Sbjct: 347 GRGCTSEGVI 356
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 GSGCANKGIL 10
G GC ++G++
Sbjct: 347 GRGCTSEGVI 356
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 1 GSGCANKGIL 10
G G N GIL
Sbjct: 134 GKGTKNAGIL 143
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 1 GSGCANKGIL 10
G G N GIL
Sbjct: 329 GKGTKNAGIL 338
>sp|VLTF3_VARV|VIRAL late gene transcription factor|Variola virus
Query: 2 SGCANKGIL 10
SGC + GI+
Sbjct: 7 SGCRHNGIV 15
>sp|VLTF3_VAR67|VIRAL late gene transcription factor|Variola virus (isolate
Query: 2 SGCANKGIL 10
SGC + GI+
Sbjct: 7 SGCRHNGIV 15
>sp|VLTF3_VACCC|VIRAL late gene transcription factor|Vaccinia virus (strain Copenhagen)
Query: 2 SGCANKGIL 10
SGC + GI+
Sbjct: 7 SGCRHNGIV 15
>sp|VLTF3_VACCA|VIRAL late gene transcription factor|Vaccinia virus (strain Ankara)
Query: 2 SGCANKGIL 10
SGC + GI+
Sbjct: 7 SGCRHNGIV 15
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 SGCANKGIL 10
+GC+N G +
Sbjct: 1367 NGCSNTGAI 1375
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 SGCANKGIL 10
S CA+ G+L
Sbjct: 504 SACASAGLL 512
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 SGCANKGIL 10
S CA+ G+L
Sbjct: 504 SACASAGLL 512
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 CANKGI 9
CAN+G+
Sbjct: 1708 CANRGM 1713
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 SGCANKG 8
S C NKG
Sbjct: 1089 SHCENKG 1095
38|SequenceR|195|186|VDFDYGSGCA
>sp|GAAP_VACCL|GOLGI anti-apoptotic protein|Vaccinia virus (strain Lister) (VACV)
Query: 2 DFDYGSGCA 10
DF+YGS A
Sbjct: 15 DFNYGSSVA 23
>sp|GAAP_VACC8|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m8) (VACV)
Query: 2 DFDYGSGCA 10
DF+YGS A
Sbjct: 15 DFNYGSSVA 23
>sp|GAAP_VACC0|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m0) (VACV)
Query: 2 DFDYGSGCA 10
DF+YGS A
Sbjct: 15 DFNYGSSVA 23
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 DFDYGSGCA 10
++ YG GCA
Sbjct: 1968 EYMYGGGCA 1976
>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 DYGSGCA 10
D GSGCA
Sbjct: 39 DLGSGCA 45
>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DYGSGCA 10
D GSGCA
Sbjct: 39 DLGSGCA 45
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 DFDYGSGCA 10
++ YG GCA
Sbjct: 1972 EYLYGGGCA 1980
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 DFDYGSGCA 10
++ YG GCA
Sbjct: 1972 EYLYGGGCA 1980
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 YGSGC 9
YGSGC
Sbjct: 149 YGSGC 153
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 2 DFDYGSGC 9
D+DY GC
Sbjct: 556 DWDYRRGC 563
>sp|UL136_HCMVT|PROTEIN UL136|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 YGSGC 9
YGSGC
Sbjct: 149 YGSGC 153
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 4 DYGSGCA 10
D GSGC+
Sbjct: 9 DVGSGCS 15
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 VDFDYGSG 8
VD+ +GSG
Sbjct: 245 VDYLFGSG 252
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 VDFDYGSG 8
VD+ +GSG
Sbjct: 245 VDYLFGSG 252
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 1 VDFDYG 6
VDF YG
Sbjct: 3 VDFHYG 8
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 YGSGC 9
+GSGC
Sbjct: 33 FGSGC 37
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 2 DFDYGSGCA 10
DF++GS A
Sbjct: 16 DFNFGSTMA 24
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 2 DFDYGSGCA 10
DF++GS A
Sbjct: 15 DFNFGSTMA 23
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 2 DFDYGSGCA 10
DF++GS A
Sbjct: 15 DFNFGSTMA 23
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 2 DFDYGSGCA 10
DF++GS A
Sbjct: 15 DFNFGSTMA 23
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 DFDYGSGCA 10
DF++GS A
Sbjct: 16 DFNFGSTMA 24
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 DFDYGSGCA 10
DF++GS A
Sbjct: 15 DFNFGSTMA 23
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 DFDYGSGCA 10
DF++GS A
Sbjct: 15 DFNFGSTMA 23
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 DFDYGSGCA 10
DF++GS A
Sbjct: 15 DFNFGSTMA 23
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VDFDYG 6
+D+D+G
Sbjct: 76 IDYDFG 81
>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)
Query: 2 DFDYGSGC 9
D DY S C
Sbjct: 327 DHDYESKC 334
>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DFDYGSGC 9
D DY S C
Sbjct: 272 DHDYESKC 279
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 4 DYGSGC 9
D G+GC
Sbjct: 492 DIGNGC 497
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 4 DYGSGC 9
D G+GC
Sbjct: 492 DIGNGC 497
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 4 DYGSGC 9
D G+GC
Sbjct: 492 DIGNGC 497
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 4 DYGSGC 9
D G+GC
Sbjct: 494 DIGNGC 499
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 4 DYGSGC 9
D G+GC
Sbjct: 477 DMGNGC 482
39|SequenceR|200|191|GRVVFVDFDY
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 1 GRVVFVDF 8
GR+V DF
Sbjct: 219 GRLVLTDF 226
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 1 GRVVFVDFDY 10
GRV D+D+
Sbjct: 68 GRVAEDDYDF 77
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 GRVVFVDFDY 10
G F++FD+
Sbjct: 1159 GNKYFIEFDW 1168
40|SequenceR|205|196|IYAGAGRVVF
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IYAGAGRVVF 10
IY+ AG+++F
Sbjct: 245 IYSKAGKILF 254
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 1 IYAGAGRVVF 10
IY+ AG+++F
Sbjct: 245 IYSKAGKILF 254
>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YAGAGRVV 9
Y G GRVV
Sbjct: 152 YPGPGRVV 159
>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain
Query: 2 YAGAGRVV 9
Y G GRVV
Sbjct: 152 YPGPGRVV 159
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 1 IYAGAGRVV 9
IY G RVV
Sbjct: 773 IYVGMSRVV 781
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 5 AGRVVF 10
AGRV+F
Sbjct: 238 AGRVIF 243
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 GAGRVVF 10
GAG VVF
Sbjct: 108 GAGSVVF 114
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 IYAGAGRVVF 10
I G GRV++
Sbjct: 320 ITKGPGRVIY 329
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 GAGRVVF 10
GAG VVF
Sbjct: 108 GAGSVVF 114
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 IYAGAGRVV 9
+YA G+VV
Sbjct: 4236 VYAALGKVV 4244
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 IYAGAGRVV 9
+Y G GR+V
Sbjct: 221 VYLGWGRLV 229
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 IYAGAGRVV 9
+Y G GR+V
Sbjct: 221 VYLGWGRLV 229
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 3 AGAGRVV 9
AGA RVV
Sbjct: 316 AGAARVV 322
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 1 IYAGAGRV 8
+YAG GR+
Sbjct: 463 LYAGHGRL 470
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 1 IYAGAGRV 8
+YAG GR+
Sbjct: 466 LYAGRGRM 473
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 1 IYAGAGRV 8
+YAG GR+
Sbjct: 466 LYAGRGRM 473
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 3 AGAGRVV 9
AGA RVV
Sbjct: 316 AGAARVV 322
41|SequenceR|210|201|TEEGCIYAGA
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 TEEGCIYA 8
T EGC YA
Sbjct: 1088 TSEGCWYA 1095
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 TEEGCIYA 8
TE GC Y
Sbjct: 1119 TENGCWYG 1126
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 TEEGCIYA 8
TE GC Y
Sbjct: 1119 TENGCWYG 1126
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 TEEGCIYA 8
TE GC Y
Sbjct: 1119 TENGCWYG 1126
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 TEEGCIYA 8
TE GC Y
Sbjct: 1119 TENGCWYG 1126
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 TEEGCIYA 8
TE GC Y
Sbjct: 1112 TENGCWYG 1119
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 TEEGCIYA 8
TE GC Y
Sbjct: 1047 TENGCWYG 1054
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 EEGCIY 7
+EGC Y
Sbjct: 925 QEGCYY 930
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 EEGCIY 7
+EGC Y
Sbjct: 925 QEGCYY 930
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|VE6_HPV23|PROTEIN E6|Human papillomavirus 23
Query: 4 GCIYAGA 10
GC YA A
Sbjct: 79 GCAYASA 85
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 TEEGCIYA 8
TE GC Y
Sbjct: 1119 TENGCWYG 1126
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 TEEGCIYA 8
TE GC Y
Sbjct: 1119 TENGCWYG 1126
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 TEEGCIYA 8
TE GC Y
Sbjct: 1119 TENGCWYG 1126
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 TEEGCIYA 8
TE GC Y
Sbjct: 1119 TENGCWYG 1126
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|VE6_HPV22|PROTEIN E6|Human papillomavirus 22
Query: 4 GCIYAGA 10
GC YA A
Sbjct: 87 GCAYASA 93
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|VTF3L_VACCT|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Tian Tan)
Query: 2 EEGCIY 7
E+GCI+
Sbjct: 228 EKGCIH 233
>sp|VTF3L_VACCA|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Ankara) (VACV)
Query: 2 EEGCIY 7
E+GCI+
Sbjct: 228 EKGCIH 233
>sp|VITF3_VARV|INTERMEDIATE transcription factor 3 large|Variola virus
Query: 2 EEGCIY 7
E+GCI+
Sbjct: 228 EKGCIH 233
>sp|VITF3_VAR67|INTERMEDIATE transcription factor 3 large|Variola virus (isolate
Query: 2 EEGCIY 7
E+GCI+
Sbjct: 228 EKGCIH 233
>sp|VITF3_VACCC|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Copenhagen)
Query: 2 EEGCIY 7
E+GCI+
Sbjct: 228 EKGCIH 233
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 EGCIYAG 9
EGC +AG
Sbjct: 89 EGCGWAG 95
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 EEGCIYA 8
EE C YA
Sbjct: 535 EECCFYA 541
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 4 GCIYAGA 10
C YAGA
Sbjct: 152 ACPYAGA 158
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 4 GCIYAGA 10
C YAGA
Sbjct: 152 ACPYAGA 158
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 4 GCIYAGA 10
C YAGA
Sbjct: 152 ACPYAGA 158
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 4 GCIYAGA 10
C YAGA
Sbjct: 152 ACSYAGA 158
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 4 GCIYAGA 10
C YAGA
Sbjct: 152 ACPYAGA 158
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 EEGCIYA 8
EE C YA
Sbjct: 535 EECCFYA 541
42|SequenceR|215|206|SEILATEEGC
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 SEILATEEGC 10
+++L+TEE C
Sbjct: 2504 AQLLSTEEAC 2513
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 SEILATEEGC 10
+E+L+ EE C
Sbjct: 2508 AELLSVEEAC 2517
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 SEILATEEGC 10
+ +L+TEE C
Sbjct: 2508 ARLLSTEEAC 2517
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 4 LATEEG 9
LATEEG
Sbjct: 498 LATEEG 503
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 SEILATEEGC 10
+++L+ EE C
Sbjct: 2511 AKLLSVEEAC 2520
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 SEILATEEGC 10
+++L+ EE C
Sbjct: 2502 AKLLSVEEAC 2511
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 SEILATEEGC 10
+++L+ EE C
Sbjct: 2505 AKLLSVEEAC 2514
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 SEILATEEGC 10
+++L+ EE C
Sbjct: 2500 AKLLSVEEAC 2509
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SEILATEEGC 10
+++L+ EE C
Sbjct: 2499 AKLLSVEEAC 2508
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SEILATEEGC 10
+++L+ EE C
Sbjct: 2499 AKLLSVEEAC 2508
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SEILATEEGC 10
+++L+ EE C
Sbjct: 2499 AKLLSVEEAC 2508
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 EILATEEGC 10
E+ +TE GC
Sbjct: 1921 ELGSTETGC 1929
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 SEILATEEGC 10
+ +L+ EE C
Sbjct: 2522 ARLLSVEEAC 2531
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 SEILATEEGC 10
+++L+ EE C
Sbjct: 2507 AKLLSIEEAC 2516
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 EILATEEGC 10
E+ +TE GC
Sbjct: 1921 ELGSTETGC 1929
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 EILATEEGC 10
E+ +TE GC
Sbjct: 1921 ELGSTETGC 1929
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 EILATEEGC 10
E+ +TE GC
Sbjct: 1921 ELGSTETGC 1929
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 EILATEEGC 10
E+ +TE GC
Sbjct: 1921 ELGSTETGC 1929
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 EILATEEGC 10
E+ +TE GC
Sbjct: 1921 ELGSTETGC 1929
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 EILATEEGC 10
E+ +TE GC
Sbjct: 1921 ELGSTETGC 1929
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 EILATEEGC 10
E+ +TE GC
Sbjct: 1921 ELGSTETGC 1929
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 EILATEEGC 10
E+ +TE GC
Sbjct: 1921 ELGSTETGC 1929
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SEILATEEGC 10
+++L+ EE C
Sbjct: 2499 AKLLSIEEAC 2508
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 SEILATEEGC 10
+++L+ EE C
Sbjct: 2526 AKLLSIEEAC 2535
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SEILATEEGC 10
+++L+ EE C
Sbjct: 2499 AKLLSIEEAC 2508
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 SEILATEEGC 10
+ +L+ EE C
Sbjct: 2500 ARLLSVEEAC 2509
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 SEILATEEGC 10
+ +L+ EE C
Sbjct: 2500 ANLLSVEEAC 2509
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SEILATEEGC 10
+ +L+ EE C
Sbjct: 2500 ANLLSVEEAC 2509
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 SEILATEEGC 10
+ +L+ EE C
Sbjct: 2500 ANLLSVEEAC 2509
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 EILATEEG 9
E+L TE+G
Sbjct: 1915 EVLLTEDG 1922
43|SequenceR|220|211|QKGEISEILA
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 QKGEISEI 8
Q GE+S+I
Sbjct: 173 QSGEVSDI 180
>sp|VE6_HPV60|PROTEIN E6|Human papillomavirus type 60
Query: 2 KGEISEIL 9
KGE+ E+L
Sbjct: 84 KGEVLEVL 91
44|SequenceR|225|216|LRPKGQKGEI
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 LRPKGQKGE 9
LRP GQ+ E
Sbjct: 1942 LRPPGQQME 1950
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 LRPKGQKGE 9
LRP GQ+ E
Sbjct: 1942 LRPPGQQME 1950
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 PKGQKGE 9
P+G KGE
Sbjct: 2012 PRGYKGE 2018
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LRPKGQKGE 9
+ KGQKG+
Sbjct: 1723 MSSKGQKGD 1731
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LRPKGQKGE 9
+ KGQKG+
Sbjct: 1723 MSSKGQKGD 1731
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 RPKGQKG 8
RP+G KG
Sbjct: 136 RPRGGKG 142
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LRPKGQK 7
LRP+G+K
Sbjct: 21 LRPRGKK 27
>sp|K12_HHV8P|PROTEIN K12|Human herpesvirus 8 type P
Query: 3 PKGQKGEI 10
P GQ+G +
Sbjct: 42 PSGQRGPV 49
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 GQKGEI 10
GQ+GEI
Sbjct: 1372 GQEGEI 1377
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LRPKGQK 7
LRP+G+K
Sbjct: 21 LRPRGKK 27
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 LRPKGQKGEI 10
L PKG G++
Sbjct: 71 LLPKGYPGQV 80
45|SequenceR|230|221|PFPPKLRPKG
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PFPPKLRPK 9
P PPKL P+
Sbjct: 234 PSPPKLPPR 242
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PFPPKLRPK 9
P PPKL P+
Sbjct: 234 PSPPKLPPR 242
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 PF---PPKLRPKG 10
PF PPKLR G
Sbjct: 620 PFCFSPPKLRSNG 632
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 3 PPKLRPKG 10
PPKLR G
Sbjct: 625 PPKLRSNG 632
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 PPKLRPKG 10
PPKLR G
Sbjct: 625 PPKLRSNG 632
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 PPKLRPKG 10
PPKLR G
Sbjct: 625 PPKLRRNG 632
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 3 PPKLRPKG 10
PP RP+G
Sbjct: 242 PPCKRPRG 249
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 3 PPKLRPKG 10
PP RP+G
Sbjct: 242 PPCKRPRG 249
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PFPPKLR 7
P PP+LR
Sbjct: 907 PQPPRLR 913
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PFPPKLR 7
P PP+LR
Sbjct: 907 PQPPRLR 913
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 1 PFPPKLRPK 9
P PP RP+
Sbjct: 635 PLPPDARPQ 643
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 PPKLRP 8
PPK RP
Sbjct: 1442 PPKFRP 1447
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 PPKLRPK 9
PP L+P+
Sbjct: 2080 PPSLKPR 2086
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 PPKLRP 8
PPK RP
Sbjct: 1442 PPKFRP 1447
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 PPKLRPK 9
PP L+P+
Sbjct: 2088 PPSLKPR 2094
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 PPKLRP 8
PPK RP
Sbjct: 1442 PPKFRP 1447
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 3 PPKLRPKG 10
PPKLR +
Sbjct: 302 PPKLRSQA 309
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 3 PPKLRPK 9
PPKLR +
Sbjct: 302 PPKLRSQ 308
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 PPKLRP 8
PP LRP
Sbjct: 2303 PPDLRP 2308
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 PPKLRPK 9
PP L+P+
Sbjct: 2079 PPSLKPR 2085
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 PPKLRP 8
PPK RP
Sbjct: 1442 PPKFRP 1447
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 3 PPKLR 7
PPKLR
Sbjct: 263 PPKLR 267
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 3 PPKLR 7
PPKLR
Sbjct: 295 PPKLR 299
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 3 PPKLR 7
PPKLR
Sbjct: 290 PPKLR 294
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 3 PPKLR 7
PPKLR
Sbjct: 257 PPKLR 261
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 3 PPKLR 7
PPKLR
Sbjct: 303 PPKLR 307
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 3 PPKLR 7
PPKLR
Sbjct: 305 PPKLR 309
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 PPKLR 7
PPKLR
Sbjct: 295 PPKLR 299
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 3 PPKLR 7
PPKLR
Sbjct: 267 PPKLR 271
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 3 PPKLR 7
PPKLR
Sbjct: 264 PPKLR 268
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 3 PPKLR 7
PPKLR
Sbjct: 302 PPKLR 306
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 3 PPKLR 7
PPKLR
Sbjct: 306 PPKLR 310
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 3 PPKLR 7
PPKLR
Sbjct: 268 PPKLR 272
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 3 PPKLR 7
PPKLR
Sbjct: 295 PPKLR 299
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 3 PPKLR 7
PPKLR
Sbjct: 289 PPKLR 293
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 3 PPKLR 7
PPKLR
Sbjct: 299 PPKLR 303
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 3 PPKLR 7
PPKLR
Sbjct: 263 PPKLR 267
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 3 PPKLR 7
PPKLR
Sbjct: 266 PPKLR 270
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 3 PPKLR 7
PPKLR
Sbjct: 262 PPKLR 266
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 3 PPKLR 7
PPKLR
Sbjct: 264 PPKLR 268
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 3 PPKLR 7
PPKLR
Sbjct: 263 PPKLR 267
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 3 PPKLR 7
PPKLR
Sbjct: 316 PPKLR 320
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 3 PPKLR 7
PPKLR
Sbjct: 268 PPKLR 272
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 3 PPKLR 7
PPKLR
Sbjct: 309 PPKLR 313
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 3 PPKLR 7
PPKLR
Sbjct: 261 PPKLR 265
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 3 PPKLR 7
PPKLR
Sbjct: 264 PPKLR 268
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 3 PPKLR 7
PPKLR
Sbjct: 262 PPKLR 266
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 3 PPKLR 7
PPKLR
Sbjct: 258 PPKLR 262
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 3 PPKLR 7
PPKLR
Sbjct: 311 PPKLR 315
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 3 PPKLR 7
PPKLR
Sbjct: 263 PPKLR 267
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 PFPPKLRPKG 10
P P RPKG
Sbjct: 64 PIPKARRPKG 73
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 3 PPKLR 7
PPKLR
Sbjct: 263 PPKLR 267
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 3 PPKLR 7
PPKLR
Sbjct: 264 PPKLR 268
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 3 PPKLR 7
PPKLR
Sbjct: 319 PPKLR 323
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 3 PPKLR 7
PPKLR
Sbjct: 265 PPKLR 269
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 PKLRPKG 10
PK+ PKG
Sbjct: 1513 PKVYPKG 1519
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 3 PPKLR 7
PPKLR
Sbjct: 341 PPKLR 345
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 3 PPKLR 7
PPKLR
Sbjct: 322 PPKLR 326
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 PFPPKLRP 8
P PP+L P
Sbjct: 819 PRPPRLCP 826
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 3 PPKLR 7
PPKLR
Sbjct: 292 PPKLR 296
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 2 FPPKLRPK 9
F P+LR K
Sbjct: 119 FKPRLREK 126
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 FPPKLRPK 9
F P+LR K
Sbjct: 119 FKPRLREK 126
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 FPPKLRPK 9
F P+LR K
Sbjct: 119 FKPRLREK 126
>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PFPPKLR 7
P PP LR
Sbjct: 110 PVPPSLR 116
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 3 PPKLR 7
PPKLR
Sbjct: 265 PPKLR 269
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 3 PPKLR 7
PPKLR
Sbjct: 320 PPKLR 324
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 PFPPKLRP 8
P PP+L P
Sbjct: 821 PRPPRLCP 828
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 3 PPKLR 7
PPKLR
Sbjct: 303 PPKLR 307
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 3 PPKLR 7
PPKLR
Sbjct: 303 PPKLR 307
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 FPPKLRP 8
FPPK P
Sbjct: 1588 FPPKTVP 1594
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 FPPKLRP 8
FPPK P
Sbjct: 1588 FPPKTVP 1594
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 FPPKLRP 8
FPPK P
Sbjct: 1588 FPPKTVP 1594
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 3 PPKLR 7
PPKLR
Sbjct: 303 PPKLR 307
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 2 FPPKLRP 8
F P LRP
Sbjct: 83 FQPALRP 89
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 2 FPPKLRP 8
F P LRP
Sbjct: 83 FQPALRP 89
>sp|Z_LASSJ|RING finger protein Z|Lassa virus (strain Mouse/Sierra
Query: 1 PFPPKLRPKG 10
P P KLRP
Sbjct: 70 PLPTKLRPSA 79
>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 FPPKLRP 8
F PKLRP
Sbjct: 209 FHPKLRP 215
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PFPPKLRPKG 10
P P RP+G
Sbjct: 64 PIPKARRPEG 73
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PFPPKLRPKG 10
P P RP+G
Sbjct: 64 PIPKARRPEG 73
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 PFPPKLRP 8
P PP+L P
Sbjct: 821 PRPPRLCP 828
>sp|VP40_EBOG4|MATRIX protein VP40|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 FPPKLRP 8
F PKLRP
Sbjct: 209 FHPKLRP 215
>sp|VP40_EBOZM|MATRIX protein VP40|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 FPPKLRP 8
F PKLRP
Sbjct: 209 FHPKLRP 215
>sp|VP40_EBOZ5|MATRIX protein VP40|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 FPPKLRP 8
F PKLRP
Sbjct: 209 FHPKLRP 215
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PFPPKLRPKG 10
P P RP+G
Sbjct: 64 PIPKARRPEG 73
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PFPPKLRPKG 10
P P RP+G
Sbjct: 64 PIPKARRPEG 73
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PFPPKLRPKG 10
P P RP+G
Sbjct: 64 PIPKARRPEG 73
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PFPPKLRPKG 10
P P RP+G
Sbjct: 64 PIPKARRPEG 73
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PFPPKLRPKG 10
P P RP+G
Sbjct: 64 PIPKARRPEG 73
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PFPPKLRP 8
P P KL+P
Sbjct: 593 PVPVKLKP 600
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 4 PKLRPKG 10
P+L PKG
Sbjct: 306 PELNPKG 312
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 4 PKLRPKG 10
P+L PKG
Sbjct: 306 PELNPKG 312
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PFPPKLRPKG 10
P P RP+G
Sbjct: 64 PIPKARRPEG 73
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 PFPPKLRPKG 10
P P RP+G
Sbjct: 64 PIPKARRPEG 73
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 3 PPKLRPKG 10
PPK +P G
Sbjct: 111 PPKKQPNG 118
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 2 FPPKLRP 8
PP+LRP
Sbjct: 492 LPPELRP 498
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PFPPKLRP 8
P P KL+P
Sbjct: 595 PVPVKLKP 602
46|SequenceR|235|226|VGVDAPFPPK
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 VGVDAPFPPK 10
VG + PF PK
Sbjct: 135 VGKEYPFKPK 144
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VGVDAPFPP 9
+GVD PP
Sbjct: 37 IGVDCDLPP 45
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VGVDAPFPP 9
+GVD PP
Sbjct: 37 IGVDCDLPP 45
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VGVDAPFPP 9
+GVD PP
Sbjct: 37 IGVDCDLPP 45
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 DAPFPP 9
DAP PP
Sbjct: 937 DAPMPP 942
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 DAPFPP 9
DAP PP
Sbjct: 937 DAPMPP 942
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 VGVDAPFPP 9
+ +DAP PP
Sbjct: 1419 ISLDAPPPP 1427
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 2 GVDAPFPP 9
GVD P PP
Sbjct: 554 GVDLPPPP 561
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 2 GVDAPFPP 9
GVD P PP
Sbjct: 554 GVDLPPPP 561
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 2 GVDAPFPP 9
GVD P PP
Sbjct: 554 GVDLPPPP 561
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 2 GVDAPFPP 9
GVD P PP
Sbjct: 554 GVDLPPPP 561
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 2 GVDAPFPP 9
GVD P PP
Sbjct: 554 GVDLPPPP 561
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DAPFPP 9
DAP PP
Sbjct: 937 DAPVPP 942
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 6 PFPP 9
PFPP
Sbjct: 1018 PFPP 1021
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GVDAPFP 8
G +APFP
Sbjct: 279 GENAPFP 285
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GVDAPFP 8
G +APFP
Sbjct: 279 GENAPFP 285
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 GVDAPFP 8
G D PFP
Sbjct: 1824 GSDNPFP 1830
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 VDAPFP 8
VDAP P
Sbjct: 1834 VDAPHP 1839
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 1 VGVDAP 6
VGVD P
Sbjct: 191 VGVDGP 196
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 APFPP 9
PFPP
Sbjct: 221 GPFPP 225
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 GVDAPFP 8
GVD P P
Sbjct: 33 GVDCPTP 39
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 4 DAPFPP 9
DAP PP
Sbjct: 217 DAPPPP 222
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 4 DAPFPP 9
D P PP
Sbjct: 622 DVPLPP 627
>sp|DUT_HHV8P|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 8 type P
Query: 1 VGVDAPFPPK 10
+GV+ P PP+
Sbjct: 160 LGVETPGPPE 169
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 5 APFPP 9
PFPP
Sbjct: 221 GPFPP 225
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 GVDAPF 7
GVD PF
Sbjct: 1882 GVDLPF 1887
47|SequenceR|240|231|TPCGFVGVDA
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 1 TPCGFVGVDA 10
T CG +G++
Sbjct: 418 TNCGLIGING 427
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 TPCGFVGVDA 10
T CG G DA
Sbjct: 1058 TVCGACGADA 1067
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 TPCGFVGVDA 10
T CG G DA
Sbjct: 1058 TVCGACGADA 1067
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 TPCGFVGVDA 10
T C + G DA
Sbjct: 922 TVCSYCGADA 931
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 TPCGFVGVD 9
TP G VGV+
Sbjct: 250 TPWGTVGVE 258
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PCGFVGVDA 10
PC F G+ A
Sbjct: 676 PCSFTGLPA 684
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 TPCGFVGV 8
TP GFV V
Sbjct: 242 TPVGFVAV 249
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 TPCGFVGV 8
TP GFV V
Sbjct: 242 TPVGFVAV 249
>sp|PG067_VARV|PROTEIN OPG067|Variola virus
Query: 4 GFVGVD 9
GF+G+D
Sbjct: 282 GFIGLD 287
>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 GFVGVD 9
GF+G+D
Sbjct: 282 GFIGLD 287
>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)
Query: 4 GFVGVD 9
GF+G+D
Sbjct: 282 GFIGLD 287
>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GFVGVD 9
GF+G+D
Sbjct: 282 GFIGLD 287
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 CGFVGVDA 10
C F GVDA
Sbjct: 376 CLFSGVDA 383
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 3 CGFVGVDA 10
C FV +DA
Sbjct: 291 CAFVDLDA 298
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 3 CGFVGVDA 10
C FV +DA
Sbjct: 291 CAFVDLDA 298
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 3 CGFVGVDA 10
C FV +DA
Sbjct: 290 CAFVDLDA 297
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 3 CGFVGVDA 10
C FV +DA
Sbjct: 290 CAFVDLDA 297
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TPCGFVGVD 9
TP GF D
Sbjct: 492 TPIGFAPTD 500
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TPCGFVGVD 9
TP GF D
Sbjct: 489 TPIGFAPTD 497
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PCGFV 6
PCG++
Sbjct: 19 PCGYI 23
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PCGFV 6
PCG++
Sbjct: 19 PCGYI 23
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PCGFV 6
PCG++
Sbjct: 19 PCGYI 23
>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25
Query: 2 PCGFVG 7
PC F G
Sbjct: 44 PCNFCG 49
>sp|VE6_HPV47|PROTEIN E6|Human papillomavirus 47
Query: 2 PCGFVG 7
PC F G
Sbjct: 39 PCNFCG 44
48|SequenceR|245|236|VNAVTTPCGF
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 VNAVTTPCGF 10
V TPCG+
Sbjct: 796 VTTSLTPCGY 805
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 VNAVTTPCGF 10
V TPCG+
Sbjct: 796 VTTSLTPCGY 805
>sp|K7_HHV8P|PROTEIN K7|Human herpesvirus 8 type P
Query: 2 NAVTTPCGF 10
N TPCG
Sbjct: 108 NYTVTPCGL 116
>sp|VE7_HPV21|PROTEIN E7|Human papillomavirus 21
Query: 4 VTTPCG 9
V TPCG
Sbjct: 52 VVTPCG 57
>sp|MATRX_HRSV|MATRIX protein|Human respiratory syncytial virus
Query: 4 VTTPC 8
VTTPC
Sbjct: 106 VTTPC 110
>sp|MATRX_HRSVB|MATRIX protein|Human respiratory syncytial virus B
Query: 4 VTTPC 8
VTTPC
Sbjct: 106 VTTPC 110
>sp|MATRX_HRSVA|MATRIX protein|Human respiratory syncytial virus A
Query: 4 VTTPC 8
VTTPC
Sbjct: 106 VTTPC 110
>sp|MATRX_HRSS2|MATRIX protein|Human respiratory syncytial virus A
Query: 4 VTTPC 8
VTTPC
Sbjct: 106 VTTPC 110
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 3 AVTTPCG 9
++T PCG
Sbjct: 207 SLTVPCG 213
>sp|IL18B_MONPV|INTERLEUKIN-18-BINDING protein|Monkeypox virus (MPXV)
Query: 1 VNAVTTPC 8
VNAV T C
Sbjct: 18 VNAVETKC 25
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 AVTTPCG 9
A+ TPCG
Sbjct: 2451 ALITPCG 2457
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 AVTTPCG 9
A+ TPCG
Sbjct: 2451 ALITPCG 2457
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 AVTTPCG 9
A+ TPCG
Sbjct: 2451 ALITPCG 2457
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 NAVTTPCG 9
+ VTT CG
Sbjct: 2038 DEVTTTCG 2045
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 NAVTTPCG 9
N +TTP G
Sbjct: 1835 NLLTTPTG 1842
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 NAVTTP 7
NAVT+P
Sbjct: 233 NAVTSP 238
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 4 VTTPC 8
+TTPC
Sbjct: 81 LTTPC 85
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 VNAVTTPCG 9
VN+ PCG
Sbjct: 2025 VNSTKCPCG 2033
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 VNAVTTPCG 9
VN+ PCG
Sbjct: 2025 VNSTKCPCG 2033
>sp|VE4_HPV6C|PROBABLE protein E4|Human papillomavirus type 6c
Query: 4 VTTPC 8
+TTPC
Sbjct: 69 LTTPC 73
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 4 VTTPCGF 10
VT P GF
Sbjct: 1641 VTAPIGF 1647
49|SequenceR|250|241|VAVTEVNAVT
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 VTEVNAVT 10
+TE+NA T
Sbjct: 1714 ITEINART 1721
50|SequenceR|255|246|CITPSVAVTE
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 ITPSVAVTE 10
+TP+VAV E
Sbjct: 242 VTPNVAVRE 250
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 CITPSV 6
CITP+V
Sbjct: 1329 CITPNV 1334
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 CITPSV 6
CITP+V
Sbjct: 1359 CITPNV 1364
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 CITPSV 6
CITP+V
Sbjct: 1309 CITPNV 1314
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 CITPSV 6
CITP+V
Sbjct: 1359 CITPNV 1364
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 CITPSV 6
CITP+V
Sbjct: 1329 CITPNV 1334
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 CITPSV 6
CITP+V
Sbjct: 1309 CITPNV 1314
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CITPSV 6
CITP+V
Sbjct: 1272 CITPNV 1277
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 2 ITPSVAVT 9
+TPSVA T
Sbjct: 348 VTPSVAQT 355
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CITPSV 6
CITP+V
Sbjct: 1272 CITPNV 1277
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 2 ITPSVAV 8
+TPSVA+
Sbjct: 338 VTPSVAL 344
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 2 ITPSVAV 8
+TPSVA+
Sbjct: 338 VTPSVAL 344
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 ITPSVAVTE 10
ITP ++TE
Sbjct: 444 ITPQSSITE 452
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 ITPSVAVTE 10
ITP ++TE
Sbjct: 444 ITPQSSITE 452
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 ITPSVAVTE 10
ITP ++TE
Sbjct: 444 ITPQSSITE 452
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 ITPSVAVTE 10
ITP ++TE
Sbjct: 444 ITPQSSITE 452
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 ITPSVAVTE 10
ITP ++TE
Sbjct: 444 ITPQSSITE 452
>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)
Query: 1 CITPSV 6
CITP+V
Sbjct: 35 CITPTV 40
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 ITPSVAVTE 10
ITP ++TE
Sbjct: 164 ITPQSSITE 172
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 ITPSVAVTE 10
ITP ++TE
Sbjct: 164 ITPQSSITE 172
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 2 ITPSVA 7
+TPSVA
Sbjct: 239 VTPSVA 244
>sp|PG155_MONPZ|ENVELOPE protein OPG155|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 CITPSVAVTE 10
CI P++ TE
Sbjct: 129 CIAPNINNTE 138
>sp|PG155_MONPV|ENVELOPE protein OPG155|Monkeypox virus (MPXV)
Query: 1 CITPSVAVTE 10
CI P++ TE
Sbjct: 129 CIAPNINNTE 138
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 ITPSVAVTE 10
ITP ++TE
Sbjct: 164 ITPQSSITE 172
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 ITPSVAVTE 10
ITP ++TE
Sbjct: 213 ITPQSSITE 221
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 ITPSVAVTE 10
ITP ++TE
Sbjct: 444 ITPQSSITE 452
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 ITPSVAVTE 10
+TP ++TE
Sbjct: 444 VTPQSSITE 452
51|SequenceR|260|251|TGGRRCITPS
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 RRCITP 9
RRCITP
Sbjct: 719 RRCITP 724
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 RRCITP 9
RRCITP
Sbjct: 719 RRCITP 724
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 RRCITP 9
RRCITP
Sbjct: 719 RRCITP 724
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 RRCITP 9
RRCITP
Sbjct: 718 RRCITP 723
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 RRCITP 9
RRCITP
Sbjct: 718 RRCITP 723
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 RRCITP 9
RRCITP
Sbjct: 718 RRCITP 723
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TGGRRC 6
TGGRRC
Sbjct: 203 TGGRRC 208
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 4 RRCITP 9
RRCITP
Sbjct: 719 RRCITP 724
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TGGRRC 6
TGGRRC
Sbjct: 203 TGGRRC 208
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 TGGRRCITP 9
T R+C+TP
Sbjct: 724 TARRKCLTP 732
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 TGGRRCITP 9
T R+C+TP
Sbjct: 722 TARRKCLTP 730
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 TGGRRCITP 9
T R+C+TP
Sbjct: 722 TARRKCLTP 730
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 GGRRCITPS 10
GG RCI S
Sbjct: 3510 GGDRCIKIS 3518
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 GGRRCITPS 10
GG RCI S
Sbjct: 3510 GGDRCIKIS 3518
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 TGGRRCITP 9
T R+C+TP
Sbjct: 724 TARRKCLTP 732
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 1 TGGRRCITP 9
T R+C+TP
Sbjct: 390 TARRKCLTP 398
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 TGGRRCITP 9
T G+R +TP
Sbjct: 872 TKGKRALTP 880
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 TGGRRCITP 9
T G+R +TP
Sbjct: 872 TKGKRALTP 880
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 5 RCITP 9
RC+TP
Sbjct: 434 RCLTP 438
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 5 RCITP 9
RC+TP
Sbjct: 434 RCLTP 438
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 GGRRCITPS 10
GGR I PS
Sbjct: 1739 GGRNLIAPS 1747
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 RCITP 9
RC+TP
Sbjct: 130 RCVTP 134
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 GGRRCITPS 10
GGR I PS
Sbjct: 1736 GGRNLIAPS 1744
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 TGGRRCIT 8
TGG+ C T
Sbjct: 1345 TGGKLCKT 1352
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 TGGRRCIT 8
TGG+ C T
Sbjct: 1382 TGGKLCKT 1389
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 TGGRRCIT 8
TGG+ C T
Sbjct: 1402 TGGKLCKT 1409
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 TGGRRCIT 8
TGG+ C T
Sbjct: 1432 TGGKLCKT 1439
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 TGGRRCIT 8
TGG+ C T
Sbjct: 1345 TGGKLCKT 1352
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 TGGRRCIT 8
TGG+ C T
Sbjct: 1382 TGGKLCKT 1389
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 TGGRRCIT 8
TGG+ C T
Sbjct: 1402 TGGKLCKT 1409
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 TGGRRCIT 8
TGG+ C T
Sbjct: 1432 TGGKLCKT 1439
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 4 RRCITP 9
R C+TP
Sbjct: 297 RACLTP 302
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 GGRRCITPS 10
GR ITPS
Sbjct: 450 AGRFSITPS 458
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 TGGRRC 6
T G+RC
Sbjct: 1066 TAGKRC 1071
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 TGGRRC 6
T G+RC
Sbjct: 1066 TAGKRC 1071
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 1 TGGRRCITPS 10
T CITP+
Sbjct: 292 TCSSECITPN 301
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 TGGRRCITPS 10
T CITP+
Sbjct: 292 TCSSECITPN 301
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 4 RRCITP 9
R C+TP
Sbjct: 722 RECLTP 727
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 GRRCITP 9
G+R +TP
Sbjct: 874 GKRALTP 880
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 4 RRCITP 9
R C+TP
Sbjct: 722 RECLTP 727
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 TGGRRCITPS 10
T CITP+
Sbjct: 292 TCSSECITPN 301
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 TGGRRCITPS 10
T CITP+
Sbjct: 292 TCSSECITPN 301
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 TGGRRCITPS 10
T CITP+
Sbjct: 292 TCSSECITPN 301
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 TGGRRCITPS 10
T CITP+
Sbjct: 292 TCSSECITPN 301
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 TGGRRCITPS 10
T CITP+
Sbjct: 292 TCSSECITPN 301
52|SequenceR|265|256|FGAFWTGGRR
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 GAFWTGGRR 10
GAF+ GG R
Sbjct: 2083 GAFYVGGER 2091
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 FGAFWT 6
FG FWT
Sbjct: 307 FGVFWT 312
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 GAFWTG 7
G FWTG
Sbjct: 436 GCFWTG 441
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 GAFWTG 7
G FWTG
Sbjct: 436 GCFWTG 441
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 2 GAFWTG 7
G FWTG
Sbjct: 436 GCFWTG 441
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 3 AFWTGG 8
A WTGG
Sbjct: 539 AAWTGG 544
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 AFWTGG 8
A WTGG
Sbjct: 539 AAWTGG 544
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 FGAFW 5
FG FW
Sbjct: 376 FGVFW 380
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 FGAFWTGGRR 10
FGA TG R+
Sbjct: 2076 FGAEVTGSRK 2085
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 FGAFWTGGRR 10
FGA TG R+
Sbjct: 2067 FGAEVTGSRK 2076
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 FGAFWTGGRR 10
FGA TG R+
Sbjct: 2068 FGAEVTGSRK 2077
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 2 GAFWT 6
G FWT
Sbjct: 359 GVFWT 363
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 4 FWTGGR 9
W GGR
Sbjct: 1736 LWIGGR 1741
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 4 FWTGGR 9
W GGR
Sbjct: 1733 LWIGGR 1738
>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GAFWTGGR 9
G W+G R
Sbjct: 85 GGVWSGNR 92
>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GAFWTGGR 9
G W+G R
Sbjct: 85 GGVWSGNR 92
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 FGAFW 5
FG FW
Sbjct: 375 FGIFW 379
>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 WTGG 8
WTGG
Sbjct: 68 WTGG 71
>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 WTGG 8
WTGG
Sbjct: 67 WTGG 70
>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)
Query: 5 WTGG 8
WTGG
Sbjct: 67 WTGG 70
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 5 WTGG 8
WTGG
Sbjct: 131 WTGG 134
>sp|LMP1_EBVR|LATENT membrane protein 1|Epstein-Barr virus (strain Raji) (HHV-4)
Query: 5 WTGG 8
WTGG
Sbjct: 47 WTGG 50
>sp|LMP1_EBVB9|LATENT membrane protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 WTGG 8
WTGG
Sbjct: 47 WTGG 50
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 5 WTGG 8
WTGG
Sbjct: 47 WTGG 50
>sp|LMP1_EBVA8|LATENT membrane protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 WTGG 8
WTGG
Sbjct: 47 WTGG 50
53|SequenceR|270|261|NRERGFGAFW
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 NRERGFGAF 9
NR GFG+F
Sbjct: 445 NRRYGFGSF 453
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 NRERGFGAF 9
NR GFG+F
Sbjct: 445 NRRYGFGSF 453
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 3 ERGFGAF 9
ERG+G+F
Sbjct: 5 ERGYGSF 11
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 3 ERGFGAF 9
ERG+G+F
Sbjct: 5 ERGYGSF 11
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 5 GFGAF 9
GFGAF
Sbjct: 921 GFGAF 925
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 5 GFGAFW 10
GF FW
Sbjct: 618 GFNLFW 623
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 1 NRERGFG 7
NR+ G+G
Sbjct: 132 NRDSGYG 138
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 NRERGFG 7
NR+ G+G
Sbjct: 132 NRDSGYG 138
54|SequenceR|275|266|LKTGSNRERG
>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 3 TGSNRERG 10
T SN++RG
Sbjct: 423 TASNKDRG 430
>sp|V_PI2H|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (HPIV-2)
Query: 2 KTGSNRERG 10
+ G+NRER
Sbjct: 162 RGGANRERA 170
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 KTGSNRE 8
K G NRE
Sbjct: 283 KVGKNRE 289
>sp|V_PI2HT|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (strain
Query: 2 KTGSNRERG 10
+ G+NRER
Sbjct: 162 RGGANRERA 170
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 LKTGSNRER 9
++TG+++ER
Sbjct: 447 VQTGTSKER 455
>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus
Query: 3 TGSNRERG 10
T SN+ RG
Sbjct: 423 TASNKNRG 430
>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 3 TGSNRERG 10
T SN+ RG
Sbjct: 423 TASNKNRG 430
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 3 TGSNRERG 10
T SN+ RG
Sbjct: 423 TASNKNRG 430
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 3 TGSNRERG 10
T SN+ RG
Sbjct: 423 TASNKNRG 430
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 LKTGSNRER 9
L TGS R+R
Sbjct: 492 LLTGSRRKR 500
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 4 GSNRERG 10
GS+ ERG
Sbjct: 141 GSSEERG 147
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LKTGSNRERG 10
LKTG +RG
Sbjct: 934 LKTGKYAKRG 943
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LKTGSNRERG 10
LKTG +RG
Sbjct: 936 LKTGKYAKRG 945
55|SequenceR|280|271|GSINFLKTGS
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 2 SINFLKT 8
SINF+K+
Sbjct: 761 SINFVKS 767
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 SINFLK 7
S+NFLK
Sbjct: 890 SLNFLK 895
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 4 NFLKTG 9
NF KTG
Sbjct: 1613 NFCKTG 1618
>sp|YVDD_VACCC|UNCHARACTERIZED 7.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GSINFL 6
GS+NFL
Sbjct: 22 GSVNFL 27
56|SequenceR|285|276|PHNVHGSINF
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 3 NVHGSINF 10
NVH +N+
Sbjct: 524 NVHNEVNY 531
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 3 NVHGSINF 10
NVH +N+
Sbjct: 523 NVHNEVNY 530
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 3 NVHGSINF 10
NVH +N+
Sbjct: 524 NVHNEVNY 531
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 3 NVHGSINF 10
NVH +N+
Sbjct: 525 NVHNEVNY 532
>sp|PHOSP_PI4HA|PHOSPHOPROTEIN parainfluenza 4a virus (strain
Query: 3 NVHGSIN 9
N HGS+N
Sbjct: 139 NEHGSMN 145
>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)
Query: 2 HNVHGSI 8
HN+HG I
Sbjct: 172 HNIHGVI 178
>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 HNVHGSI 8
HN+HG I
Sbjct: 172 HNIHGVI 178
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 PHNVHGSI 8
P NVH +I
Sbjct: 887 PKNVHSNI 894
>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 HNVHGSIN 9
HN++ SIN
Sbjct: 235 HNINISIN 242
>sp|V_PI4HA|NON-STRUCTURAL protein V|Human parainfluenza 4a virus (strain
Query: 3 NVHGSIN 9
N HGS+N
Sbjct: 139 NEHGSMN 145
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 HNVHGS 7
H VHG+
Sbjct: 992 HTVHGT 997
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 PHNVHGSI 8
P NVH ++
Sbjct: 206 PFNVHNTL 213
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 2 HNVHGS 7
H++HG+
Sbjct: 447 HDIHGA 452
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 2 HNVHGS 7
H++HG+
Sbjct: 447 HDIHGA 452
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HNVHGS 7
H++HG+
Sbjct: 447 HDIHGA 452
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 HNVHGS 7
H++HG+
Sbjct: 447 HDIHGA 452
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 2 HNVHGS 7
H++HG+
Sbjct: 447 HDIHGA 452
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PHNVHGSI 8
PH + GSI
Sbjct: 482 PHAIDGSI 489
>sp|VE6_HPV54|PROTEIN E6|Human papillomavirus type 54
Query: 4 VHGSINF 10
+HG IN+
Sbjct: 71 LHGQINY 77
>sp|YVD2_VACCC|UNCHARACTERIZED 8.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 NVHGSINF 10
++HG IN+
Sbjct: 62 DIHGGINY 69
57|SequenceR|290|281|EEVTCPHNVH
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 2 EVTCPH 7
E TCPH
Sbjct: 163 EQTCPH 168
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 3 VTCPHNVH 10
V PHN+H
Sbjct: 333 VYAPHNLH 340
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 EEVTCPHN 8
+ +TCPH+
Sbjct: 1787 QALTCPHH 1794
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 VTCPHNV 9
V CPH V
Sbjct: 1937 VLCPHGV 1943
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 VTCPHNV 9
V CPH V
Sbjct: 1937 VLCPHGV 1943
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 4 TCPHNVH 10
+CP+ VH
Sbjct: 519 SCPNKVH 525
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 2 EVTCPHNV 9
E+TC +N+
Sbjct: 137 EMTCSYNI 144
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 2 EVTCPHNV 9
E+TC +N+
Sbjct: 137 EMTCSYNI 144
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 VTCPHNV 9
V+CP NV
Sbjct: 4 VSCPANV 10
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 EVTCPHNV 9
+V CPH +
Sbjct: 26 KVECPHTI 33
>sp|TEG6_VZVO|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 TCPHNVH 10
TCP N H
Sbjct: 39 TCPANSH 45
>sp|TEG6_VZVD|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Dumas)
Query: 4 TCPHNVH 10
TCP N H
Sbjct: 39 TCPANSH 45
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 EVTCPHNV 9
++ CPH V
Sbjct: 27 KIECPHTV 34
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 2 EVTCPHNV 9
++ CPH V
Sbjct: 27 KIECPHTV 34
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 EVTCPHNVH 10
+ CPH+V+
Sbjct: 24 RIQCPHSVN 32
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VTCPHNVH 10
V CP +H
Sbjct: 1133 VHCPDGIH 1140
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VTCPHNVH 10
V CP +H
Sbjct: 1133 VHCPDGIH 1140
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 EVTCPHNVH 10
++ CPH+++
Sbjct: 26 KIECPHSIN 34
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VTCPHNVH 10
V CP +H
Sbjct: 1133 VHCPDGIH 1140
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VTCPHNVH 10
V CP +H
Sbjct: 1133 VHCPDGIH 1140
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VTCPHNVH 10
V CP +H
Sbjct: 1133 VHCPDGIH 1140
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EVTCPHNV 9
++ CP NV
Sbjct: 601 KIICPTNV 608
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 6 PHNVH 10
PH VH
Sbjct: 1347 PHKVH 1351
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 EVTCPHNV 9
+ CPH+V
Sbjct: 24 RIQCPHSV 31
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 6 PHNVH 10
PHN H
Sbjct: 1609 PHNSH 1613
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 6 PHNVH 10
PHN H
Sbjct: 1609 PHNSH 1613
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VTCPHNV 9
VTC H +
Sbjct: 241 VTCTHGI 247
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 3 VTCPHNVH 10
+ CP ++H
Sbjct: 342 LVCPRDIH 349
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 3 VTCPHNVH 10
+T P +VH
Sbjct: 553 ITTPQDVH 560
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 4 TCPHNVH 10
TCP N++
Sbjct: 372 TCPTNIN 378
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 2 EVTCPHNV 9
++ CPH V
Sbjct: 26 KIECPHTV 33
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 EVTCPHNV 9
++ CPH V
Sbjct: 27 KIECPHTV 34
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 2 EVTCPHNV 9
++ CPH V
Sbjct: 26 KIECPHTV 33
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 2 EVTCPHNV 9
++ CPH V
Sbjct: 26 KIECPHTV 33
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 PHNVH 10
PH+VH
Sbjct: 841 PHHVH 845
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VTCPHNV 9
VTC H +
Sbjct: 245 VTCTHGI 251
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 PHNVH 10
PH+VH
Sbjct: 842 PHHVH 846
58|SequenceR|295|286|PVSMEEEVTC
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 2 VSMEEEVTC 10
VSM E ++C
Sbjct: 148 VSMNERISC 156
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 PVSMEEEVTC 10
P SM VTC
Sbjct: 2710 PTSMGNTVTC 2719
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 1 PVSMEEEVT 9
P+S EE++T
Sbjct: 228 PISPEEQLT 236
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 PVSMEEEVT 9
P+S EE++T
Sbjct: 231 PISPEEQLT 239
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 4 MEEEVTC 10
MEE++ C
Sbjct: 1 MEEDIAC 7
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 4 MEEEVTC 10
MEE++ C
Sbjct: 1 MEEDIAC 7
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 PVSMEEEV 8
P+S+EE V
Sbjct: 1798 PLSLEESV 1805
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 PVSMEEEVTC 10
P SM +TC
Sbjct: 2717 PTSMGNTLTC 2726
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 PVSMEEEV 8
P++ME+ V
Sbjct: 1787 PIAMEDSV 1794
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PVSMEEEVTC 10
P SM +TC
Sbjct: 2714 PTSMGNTLTC 2723
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PVSMEEEVTC 10
P SM +TC
Sbjct: 2713 PTSMGNTLTC 2722
59|SequenceR|300|291|ILEKLPVSME
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 EKLPVS 8
EKLP+S
Sbjct: 2441 EKLPIS 2446
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 EKLPVS 8
EKLP+S
Sbjct: 2451 EKLPIS 2456
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 EKLPVS 8
EKLP+S
Sbjct: 2449 EKLPIS 2454
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 EKLPVS 8
EKLP+S
Sbjct: 2449 EKLPIS 2454
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 EKLPVS 8
EKLP+S
Sbjct: 2461 EKLPIS 2466
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 EKLPVS 8
EKLP+S
Sbjct: 2450 EKLPIS 2455
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 EKLPVS 8
EKLP+S
Sbjct: 2447 EKLPIS 2452
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LEKLPVSME 10
+E+LP +ME
Sbjct: 2137 VEELPETME 2145
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 ILEKLPVSM 9
I +KLPV++
Sbjct: 2624 ITQKLPVAV 2632
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LEKLPVSME 10
+E+LP +ME
Sbjct: 2137 VEELPETME 2145
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LEKLPVSME 10
+E+LP +ME
Sbjct: 2137 VEELPETME 2145
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LEKLPVSME 10
+E+LP +ME
Sbjct: 2137 VEELPETME 2145
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LEKLPVSME 10
+E+LP +ME
Sbjct: 2137 VEELPETME 2145
60|SequenceR|305|296|GAHKEILEKL
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 1 GAHKEILE 8
G H EILE
Sbjct: 424 GLHNEILE 431
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 GAHKEILEK 9
G HK +LE+
Sbjct: 208 GTHKYVLER 216
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 GAHKEILEK 9
G HK +LE+
Sbjct: 208 GTHKYVLER 216
>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P
Query: 4 KEILEKL 10
KE+LEKL
Sbjct: 136 KELLEKL 142
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 GAHKEILE 8
GAH+ +LE
Sbjct: 11 GAHETLLE 18
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 GAHKEILE 8
GAH+ +LE
Sbjct: 11 GAHETLLE 18
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 GAHKEILE 8
G H++ILE
Sbjct: 1300 GQHEKILE 1307
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 KEILEK 9
KE+LEK
Sbjct: 403 KEVLEK 408
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 KEILEK 9
KE+LEK
Sbjct: 403 KEVLEK 408
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 3 HKEILEKL 10
KE+L+KL
Sbjct: 123 QKELLQKL 130
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 HKEILEKL 10
HKE+L+ +
Sbjct: 1604 HKEVLQAV 1611
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 3 HKEILEKL 10
HKE+L+ +
Sbjct: 1604 HKEVLQAV 1611
61|SequenceR|310|301|GGTVGGAHKE
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 2 GTVGGAHK 9
GT+GGA K
Sbjct: 244 GTMGGAFK 251
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 GTVGGAHK 9
GT+GGA K
Sbjct: 243 GTMGGAFK 250
>sp|B4_HHV6Z|PROTEIN B4|Human herpesvirus 6B (strain Z29)
Query: 3 TVGGAH 8
T+GGAH
Sbjct: 140 TLGGAH 145
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 GTVGGAHK 9
GTVGG K
Sbjct: 1698 GTVGGFSK 1705
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 GGTVGGAH 8
GG GGA+
Sbjct: 1307 GGCAGGAY 1314
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 1 GGTVGGAH 8
GG + GAH
Sbjct: 413 GGRLKGAH 420
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 GGTVGG 6
GTVGG
Sbjct: 1707 AGTVGG 1712
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 GGTVGG 6
GTVGG
Sbjct: 1707 AGTVGG 1712
>sp|UL04_HCMVT|EARLY glycoprotein GP48|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 GTVGG 6
GTVGG
Sbjct: 52 GTVGG 56
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GGTVGGAH 8
GG GGA+
Sbjct: 1303 GGCSGGAY 1310
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 3 TVGGAHKE 10
T GG H E
Sbjct: 67 TSGGIHSE 74
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GGTVGGAH 8
GG GGA+
Sbjct: 1303 GGCSGGAY 1310
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GGTVGGAH 8
GG GGA+
Sbjct: 1309 GGCSGGAY 1316
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GGTVGGAH 8
GG GGA+
Sbjct: 1303 GGCSGGAY 1310
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GGTVGGAH 8
GG GGA+
Sbjct: 1307 GGCSGGAY 1314
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GGTVGGAH 8
GG GGA+
Sbjct: 1303 GGCSGGAY 1310
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GGTVGGAH 8
GG GGA+
Sbjct: 1308 GGCSGGAY 1315
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GGTVGGAHK 9
GG VGG +
Sbjct: 141 GGPVGGVSR 149
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GGTVGGAH 8
GG GGA+
Sbjct: 1303 GGCSGGAY 1310
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GGTVGGAH 8
GG GGA+
Sbjct: 1309 GGCSGGAY 1316
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 GGTVGGAH 8
GG GGA+
Sbjct: 1307 GGCSGGAY 1314
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GGTVGGAH 8
GG GGA+
Sbjct: 1303 GGCSGGAY 1310
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GGTVGGAH 8
GG GGA+
Sbjct: 1303 GGCSGGAY 1310
62|SequenceR|315|306|LLNDWGGTVG
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 NDWGGTV 9
N+WGG++
Sbjct: 97 NEWGGSL 103
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 2 LNDWGGT 8
L DWGG+
Sbjct: 660 LYDWGGS 666
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 2 LNDWGGT 8
L DWGG+
Sbjct: 654 LYDWGGS 660
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 2 LNDWGGT 8
L DWGG+
Sbjct: 656 LYDWGGS 662
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 1 LLNDWGGTV 9
LLN GGT+
Sbjct: 215 LLNSGGGTI 223
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 1 LLNDWGGTV 9
LLN GGT+
Sbjct: 215 LLNSGGGTI 223
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 1 LLNDWGGTV 9
LLN GGT+
Sbjct: 217 LLNSGGGTI 225
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 NDWGGTV 9
N+WG T+
Sbjct: 97 NEWGSTL 103
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 NDWGGTV 9
N+W G+V
Sbjct: 173 NEWSGSV 179
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 NDWGGTV 9
N+W G+V
Sbjct: 173 NEWSGSV 179
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 NDWGGTV 9
N+W G+V
Sbjct: 173 NEWSGSV 179
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 2 LNDWGGTV 9
L+DWG +
Sbjct: 256 LSDWGKVI 263
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 2 LNDWGGTV 9
L+DWG +
Sbjct: 256 LSDWGKVI 263
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 2 LNDWGGTV 9
L+DWG +
Sbjct: 256 LSDWGKVI 263
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 2 LNDWGGTV 9
L+DWG +
Sbjct: 256 LSDWGKVI 263
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 2 LNDWGGTV 9
L+DWG +
Sbjct: 256 LSDWGKVI 263
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 NDWGGT 8
+DW GT
Sbjct: 558 HDWAGT 563
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 NDWGGT 8
+DW GT
Sbjct: 558 HDWAGT 563
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 NDWGGT 8
+DW GT
Sbjct: 558 HDWAGT 563
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LLNDWG 6
LLN WG
Sbjct: 594 LLNSWG 599
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 NDWGGT 8
+DW GT
Sbjct: 1408 DDWNGT 1413
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 5 WGGTV 9
WGG+V
Sbjct: 147 WGGSV 151
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 5 WGGTV 9
WGG+V
Sbjct: 147 WGGSV 151
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 5 WGGTV 9
WGG+V
Sbjct: 147 WGGSV 151
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 NDWGGT 8
+DW GT
Sbjct: 1409 DDWNGT 1414
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LLNDWGG 7
+LN+W G
Sbjct: 379 MLNNWDG 385
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LLNDWGG 7
+LN+W G
Sbjct: 379 MLNNWDG 385
>sp|VP2_SOUV3|MINOR capsid protein VP2|Southampton virus (strain GI/Human/United
Query: 2 LNDWGGT 8
L DW GT
Sbjct: 97 LIDWNGT 103
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 4 DWGGT 8
DW GT
Sbjct: 942 DWSGT 946
>sp|NEC2_HHV2H|NUCLEAR egress protein 2|Human herpesvirus 2 (strain HG52)
Query: 1 LLNDWG 6
L+NDW
Sbjct: 72 LMNDWA 77
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 LLNDWGGTV 9
L D+GGT+
Sbjct: 2079 FLLDYGGTL 2087
>sp|VP2_LORDV|MINOR capsid protein VP2|Lordsdale virus (strain GII/Human/United
Query: 4 DWGGT 8
DW GT
Sbjct: 110 DWSGT 114
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 LLNDWGGTV 9
L N W GT+
Sbjct: 437 LPNFWTGTI 445
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 LLNDWGGTV 9
L N W GT+
Sbjct: 447 LPNFWTGTI 455
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 LLNDWGGTV 9
L N W GT+
Sbjct: 447 LPNFWTGTI 455
63|SequenceR|320|311|GPIVALLNDW
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 5 ALLNDW 10
ALL+DW
Sbjct: 398 ALLDDW 403
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 5 ALLNDW 10
ALL DW
Sbjct: 398 ALLEDW 403
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GPIVALLNDW 10
GP LL W
Sbjct: 680 GPATMLLRQW 689
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PIVALLNDW 10
PI+ L DW
Sbjct: 787 PILQNLRDW 795
>sp|VME1_MERS1|MEMBRANE protein|Middle East respiratory syndrome-related coronavirus
Query: 3 IVALLNDW 10
I+A++ DW
Sbjct: 12 IIAIIKDW 19
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GPIVALLNDW 10
GP LL W
Sbjct: 680 GPATMLLRQW 689
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 ALLNDW 10
ALLN W
Sbjct: 593 ALLNSW 598
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 VALLNDW 10
VALL+ W
Sbjct: 3384 VALLHTW 3390
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 VALLNDW 10
VALL+ W
Sbjct: 3384 VALLHTW 3390
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 GPIVAL 6
GP+VAL
Sbjct: 1130 GPVVAL 1135
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 GPIVAL 6
GP+VAL
Sbjct: 1130 GPVVAL 1135
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 GPIVAL 6
GP+VAL
Sbjct: 1130 GPVVAL 1135
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 GPIVALLNDW 10
GP+ +ND+
Sbjct: 719 GPVPTSVNDY 728
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 GPIVALLNDW 10
GP+ +ND+
Sbjct: 719 GPVPTSVNDY 728
64|SequenceR|325|316|PTSSGGPIVA
>sp|NEC2_HHV6Z|NUCLEAR egress protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 PTSSGGPIV 9
PT + GP+V
Sbjct: 268 PTPASGPVV 276
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PTSSGGPIV 9
P +SG PIV
Sbjct: 1606 PGTSGSPIV 1614
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PTSSGGPIV 9
P +SG PIV
Sbjct: 1607 PGTSGSPIV 1615
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PTSSGGPIV 9
P +SG PIV
Sbjct: 1607 PGTSGSPIV 1615
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PTSSGGPIV 9
P +SG PIV
Sbjct: 1607 PGTSGSPIV 1615
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PTSSGGPIV 9
P +SG PIV
Sbjct: 1607 PGTSGSPIV 1615
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PTSSGGPIV 9
P +SG PIV
Sbjct: 1607 PGTSGSPIV 1615
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 1 PTSSGGPI 8
PT+SGG I
Sbjct: 55 PTASGGLI 62
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 PTSSGGPIVA 10
PTS G P VA
Sbjct: 32 PTSPGTPGVA 41
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PTSSGGPIV 9
P +SG PIV
Sbjct: 1197 PGTSGSPIV 1205
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PTSSGGPIV 9
P +SG PI+
Sbjct: 1607 PGTSGSPII 1615
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PTSSGGPIV 9
P +SG PI+
Sbjct: 1607 PGTSGSPII 1615
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 PTSSGGPIV 9
P +SG PI+
Sbjct: 1607 PGTSGSPII 1615
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PTSSGGPIV 9
P +SG PI+
Sbjct: 1607 PGTSGSPII 1615
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PTSSGGPIV 9
P +SG PI+
Sbjct: 1606 PGTSGSPII 1614
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PTSSGGPIV 9
P +SG PI+
Sbjct: 1606 PGTSGSPII 1614
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PTSSGGPIV 9
P +SG PI+
Sbjct: 1605 PGTSGSPII 1613
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PTSSGGPIV 9
P +SG PI+
Sbjct: 1605 PGTSGSPII 1613
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PTSSGGPIV 9
P +SG PI+
Sbjct: 1605 PGTSGSPII 1613
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PTSSGGPIV 9
P +SG PI+
Sbjct: 1606 PGTSGSPII 1614
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PTSSGGPIV 9
P +SG PI+
Sbjct: 1606 PGTSGSPII 1614
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PTSSGGPIV 9
P +SG PI+
Sbjct: 1606 PGTSGSPII 1614
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PTSSGGPIV 9
P +SG PI+
Sbjct: 1605 PGTSGSPII 1613
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PTSSGGPIV 9
P +SG PI+
Sbjct: 1605 PGTSGSPII 1613
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTSSGGPIVA 10
PT + PIVA
Sbjct: 1119 PTETESPIVA 1128
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 1 PTSSGGPIVA 10
PT+SGG A
Sbjct: 31 PTASGGATSA 40
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 SSGGPIVA 10
SSGGPI+
Sbjct: 1168 SSGGPIMC 1175
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 SSGGPIVA 10
SSGGPI+
Sbjct: 1165 SSGGPIMC 1172
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 PTSSGGPI 8
P S GGP+
Sbjct: 1022 PRSIGGPV 1029
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 SSGGPIVA 10
SSGGPI+
Sbjct: 1169 SSGGPIMC 1176
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 PTSSGGPI 8
P S GGP+
Sbjct: 1022 PRSIGGPV 1029
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 PTSSGGPI 8
P S GGP+
Sbjct: 1022 PRSIGGPV 1029
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 PTSSGGPI 8
P S GGP+
Sbjct: 1022 PRSIGGPV 1029
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 PTSSGGPI 8
P S GGP+
Sbjct: 1022 PRSIGGPV 1029
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 PTSSGGPI 8
P S GGP+
Sbjct: 1022 PRSIGGPV 1029
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PTSSGGPIV 9
PT S PIV
Sbjct: 1098 PTQSDSPIV 1106
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 PTSSGGPI 8
P S GGP+
Sbjct: 1022 PRSIGGPV 1029
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 PTSSGGPI 8
P S GGP+
Sbjct: 1022 PRSIGGPV 1029
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 PTSSGGPI 8
P S GGP+
Sbjct: 1022 PRSIGGPV 1029
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PTSSGGPIV 9
PT S PIV
Sbjct: 1096 PTQSESPIV 1104
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PTSSGG 6
PT+SGG
Sbjct: 472 PTASGG 477
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1169 SSGGPVMC 1176
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1168 SSGGPVLC 1175
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1168 SSGGPVLC 1175
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1168 SSGGPVLC 1175
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1168 SSGGPVLC 1175
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1170 SSGGPVMC 1177
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1168 SSGGPVLC 1175
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 PTSSGGPIV 9
P+SSGG ++
Sbjct: 3097 PSSSGGCVM 3105
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 PTSSGGPIV 9
P+SSGG ++
Sbjct: 3097 PSSSGGCVM 3105
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1165 SSGGPVMC 1172
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1168 SSGGPVLC 1175
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1172 SSGGPVMC 1179
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1170 SSGGPVMC 1177
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 PTSSGGP 7
PTS G P
Sbjct: 59 PTSGGSP 65
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1164 SSGGPLLC 1171
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1164 SSGGPLLC 1171
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1164 SSGGPLLC 1171
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1164 SSGGPLLC 1171
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1164 SSGGPLLC 1171
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1164 SSGGPLLC 1171
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1164 SSGGPLLC 1171
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1164 SSGGPLLC 1171
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1164 SSGGPLLC 1171
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1168 SSGGPLLC 1175
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1164 SSGGPLLC 1171
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1164 SSGGPLLC 1171
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1164 SSGGPLLC 1171
>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)
Query: 4 SGGPIV 9
+GGP+V
Sbjct: 45 NGGPVV 50
>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 SGGPIV 9
+GGP+V
Sbjct: 45 NGGPVV 50
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1164 SSGGPLLC 1171
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1169 SSGGPLMC 1176
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1162 SSGGPLMC 1169
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1165 SSGGPMLC 1172
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 SSGGPIVA 10
SSGGP++
Sbjct: 1166 SSGGPMLC 1173
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 SSGGPIV 9
SSG PI+
Sbjct: 1637 SSGSPII 1643
65|SequenceR|330|321|SKPILPTSSG
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 PILPTSSG 10
P+LPTS+G
Sbjct: 770 PVLPTSAG 777
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 PILPTSSG 10
P+LPTS+G
Sbjct: 770 PVLPTSAG 777
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 SKPILP 6
SKPILP
Sbjct: 1177 SKPILP 1182
>sp|ICP22_HHV2|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (HHV-2) (Human
Query: 2 KPILPTSS 9
+P+LP+SS
Sbjct: 32 RPVLPSSS 39
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 SKPILPTSSG 10
S+P P++SG
Sbjct: 1782 SRPSTPSASG 1791
>sp|CAP6_ADE12|PRE-PROTEIN VI|Human adenovirus A serotype 12
Query: 1 SKPILPTSS 9
+KPILP ++
Sbjct: 174 TKPILPMAT 182
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 PILPTSSG 10
P++P+S G
Sbjct: 445 PVVPSSQG 452
66|SequenceR|335|326|VTECVSKPIL
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 ECVSKPIL 10
+C+SKPI+
Sbjct: 1921 QCLSKPII 1928
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 ECVSKPIL 10
+C+SKPI+
Sbjct: 1921 QCLSKPII 1928
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 2 TECVSKPIL 10
T C S+P++
Sbjct: 606 TRCYSRPLI 614
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TECVSKPIL 10
T C S+P++
Sbjct: 606 TRCYSRPLI 614
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3186 DCVVKPI 3192
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3186 DCVVKPI 3192
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3182 DCVVKPI 3188
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3167 DCVVKPI 3173
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3193 DCVVKPI 3199
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3189 DCVVKPI 3195
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3177 DCVVKPI 3183
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3187 DCVVKPI 3193
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3156 DCVVKPI 3162
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3155 DCVVKPI 3161
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3156 DCVVKPI 3162
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 TECVSKP 8
T+C SKP
Sbjct: 864 TQCTSKP 870
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3154 DCVVKPI 3160
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3154 DCVVKPI 3160
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 TECVSKP 8
T+C SKP
Sbjct: 867 TQCTSKP 873
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3154 DCVVKPI 3160
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3154 DCVVKPI 3160
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ECVSKPI 9
+CV KPI
Sbjct: 3154 DCVVKPI 3160
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 TECVSKP 8
T+C SKP
Sbjct: 865 TQCTSKP 871
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 5 VSKPIL 10
VSKPIL
Sbjct: 1176 VSKPIL 1181
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3175 DCVVKPV 3181
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 CVSKPIL 10
C+ KP+L
Sbjct: 5404 CIRKPLL 5410
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 CVSKPIL 10
C+ KP+L
Sbjct: 5374 CIRKPLL 5380
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 CVSKPIL 10
C+ KP+L
Sbjct: 5354 CIRKPLL 5360
>sp|PHOSP_PIV5|PHOSPHOPROTEIN virus 5 (strain W3)
Query: 3 ECVSKP 8
+C+SKP
Sbjct: 356 DCISKP 361
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 CVSKPIL 10
C+ KP+L
Sbjct: 5316 CIRKPLL 5322
>sp|YL11_ADE41|UNCHARACTERIZED 16.5 kDa protein in|Human adenovirus F serotype 41
Query: 4 CVSKPIL 10
C+SKP L
Sbjct: 49 CISKPAL 55
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 VTECVSK 7
VT+C++K
Sbjct: 196 VTDCIAK 202
Query: 4 CVSKPIL 10
C S+P+L
Sbjct: 505 CYSRPLL 511
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 ECVSKPIL 10
+C+ KP+L
Sbjct: 4988 DCLRKPML 4995
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3197 DCVVKPL 3203
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3194 DCVVKPL 3200
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3198 DCVVKPL 3204
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3198 DCVVKPL 3204
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3197 DCVVKPL 3203
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3196 DCVVKPL 3202
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3196 DCVVKPL 3202
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3196 DCVVKPL 3202
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3196 DCVVKPL 3202
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TECVSKPIL 10
T C S+P++
Sbjct: 549 TMCYSRPLV 557
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TECVSKPIL 10
T C S+P++
Sbjct: 549 TMCYSRPLV 557
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TECVSKPIL 10
T C S+P++
Sbjct: 549 TMCYSRPLV 557
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3155 DCVVKPL 3161
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3155 DCVVKPL 3161
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3155 DCVVKPL 3161
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3152 DCVVKPL 3158
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3155 DCVVKPL 3161
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3155 DCVVKPL 3161
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 3 ECVSKP 8
EC SKP
Sbjct: 397 ECNSKP 402
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3152 DCVVKPL 3158
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3152 DCVVKPL 3158
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3152 DCVVKPL 3158
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3152 DCVVKPL 3158
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3152 DCVVKPL 3158
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECVSKPI 9
+CV KP+
Sbjct: 3155 DCVVKPL 3161
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 3 ECVSKP 8
EC SKP
Sbjct: 397 ECNSKP 402
67|SequenceR|340|331|DFDMLVTECV
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 DFDMLV 6
DFDMLV
Sbjct: 2732 DFDMLV 2737
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 DMLVTECV 10
DMLVTE +
Sbjct: 1418 DMLVTEMI 1425
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1412 LDMLVTE 1418
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1411 LDMLVTE 1417
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1413 LDMLVTE 1419
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1411 LDMLVTE 1417
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1421 LDMLVTE 1427
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1409 LDMLVTE 1415
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1414 LDMLVTE 1420
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1402 LDMLVTE 1408
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1402 LDMLVTE 1408
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1403 LDMLVTE 1409
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1401 LDMLVTE 1407
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1401 LDMLVTE 1407
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1403 LDMLVTE 1409
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1403 LDMLVTE 1409
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1405 LDMLVTE 1411
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1400 LDMLVTE 1406
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 FDMLVTE 8
DMLVTE
Sbjct: 1419 LDMLVTE 1425
>sp|UL22A_HCMVM|GLYCOPROTEIN UL22A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DFDMLVTE 8
D+D+L+T+
Sbjct: 70 DYDVLITD 77
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 DFDMLV 6
D+DMLV
Sbjct: 2734 DYDMLV 2739
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DFDMLVTEC 9
D D++ T C
Sbjct: 1895 DLDVIFTTC 1903
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 5 LVTECV 10
LVT+C+
Sbjct: 647 LVTQCI 652
68|SequenceR|345|336|AQVLADFDML
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 AQVLADFDML 10
A L DFDML
Sbjct: 2727 AAKLKDFDML 2736
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 AQVLADFDM 9
AQV++ FD+
Sbjct: 1178 AQVVSQFDL 1186
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 4 LADFDM 9
L+DFDM
Sbjct: 28 LSDFDM 33
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 3 VLADFDML 10
VLADF ++
Sbjct: 298 VLADFSLV 305
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 3 VLADFDML 10
VLADF ++
Sbjct: 298 VLADFSLV 305
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 6 DFDML 10
DFDML
Sbjct: 439 DFDML 443
69|SequenceR|350|341|GLGTQAQVLA
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 4 TQAQVLA 10
TQ+Q+LA
Sbjct: 622 TQSQILA 628
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 GLGTQAQVLA 10
G+GT++ VLA
Sbjct: 2771 GVGTRSVVLA 2780
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 4 TQAQVLA 10
TQ+Q+LA
Sbjct: 620 TQSQILA 626
70|SequenceR|355|346|IVAATGLGTQ
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 1 IVAATGLGT 9
IVAAT +GT
Sbjct: 163 IVAATIIGT 171
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VAATGLGTQ 10
+AA+GLG +
Sbjct: 576 IAASGLGVR 584
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VAATGLGTQ 10
+AA+GLG +
Sbjct: 576 IAASGLGVR 584
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 1 IVAATGLGT 9
+VAAT +GT
Sbjct: 163 MVAATIIGT 171
71|SequenceR|360|351|SRDMVIVAAT
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 3 DMVIVAAT 10
DM+++AAT
Sbjct: 263 DMIVMAAT 270
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDMVIVAA 9
RD+V++AA
Sbjct: 758 RDLVLIAA 765
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 DMVIVAAT 10
DM+++AAT
Sbjct: 263 DMIVMAAT 270
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDMVIVAA 9
RD++++AA
Sbjct: 771 RDLILIAA 778
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDMVIVAA 9
RD++++AA
Sbjct: 769 RDLILIAA 776
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDMVIVAA 9
RD++++AA
Sbjct: 763 RDLILIAA 770
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDMVIVAA 9
RD++++AA
Sbjct: 760 RDLILIAA 767
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDMVIVAA 9
RD++++AA
Sbjct: 765 RDLILIAA 772
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 2 RDMVIVAAT 10
R+M+I AAT
Sbjct: 491 RNMIIHAAT 499
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 2 RDMVIVAAT 10
R+M+I AAT
Sbjct: 321 RNMIIHAAT 329
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 2 RDMVIVAAT 10
R+M+I AAT
Sbjct: 491 RNMIIHAAT 499
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 2 RDMVIVAAT 10
R+M+I AAT
Sbjct: 490 RNMIIHAAT 498
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDMVIVAA 9
RD V++AA
Sbjct: 766 RDFVLIAA 773
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDMVIVAA 9
RD V++AA
Sbjct: 764 RDFVLIAA 771
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDMVIVAA 9
RD++++AA
Sbjct: 759 RDLLLIAA 766
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDMVIVAA 9
RD++++AA
Sbjct: 772 RDLLLIAA 779
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDMVIVAA 9
RD++++AA
Sbjct: 771 RDLLLIAA 778
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDMVIVAA 9
RD +++AA
Sbjct: 748 RDFILIAA 755
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDMVIVAA 9
RD +++AA
Sbjct: 762 RDFILIAA 769
72|SequenceR|365|356|KVIDTSRDMV
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 4 DTSRDM 9
DTSR+M
Sbjct: 96 DTSREM 101
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 4 DTSRDM 9
DTSR+M
Sbjct: 96 DTSREM 101
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 4 DTSRDM 9
DTSR+M
Sbjct: 96 DTSREM 101
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 4 DTSRDM 9
DTSR+M
Sbjct: 96 DTSREM 101
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 4 DTSRDM 9
DTSR+M
Sbjct: 96 DTSREM 101
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 3 IDTSRDMV 10
IDT +D+V
Sbjct: 206 IDTGKDLV 213
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 4 DTSRDM 9
DTSR+M
Sbjct: 96 DTSREM 101
>sp|X_HBVB8|PROTEIN X|Hepatitis B virus genotype B1
Query: 3 IDTSRDMV 10
+DT+RD++
Sbjct: 9 LDTARDVL 16
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 3 IDTSRDMV 10
IDT D+V
Sbjct: 46 IDTGEDLV 53
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 3 IDTSRDMV 10
+DT +D+V
Sbjct: 205 VDTEKDLV 212
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 3 IDTSRDMV 10
+DT +D+V
Sbjct: 205 VDTEKDLV 212
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 3 IDTSRDMV 10
+DT +D+V
Sbjct: 205 VDTGKDLV 212
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 KVIDTSRDMV 10
K++D RD V
Sbjct: 255 KILDEERDKV 264
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KVIDTSRDMV 10
K++D RD V
Sbjct: 255 KILDEERDKV 264
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KVIDTSRDMV 10
K++D RD V
Sbjct: 255 KILDEERDKV 264
73|SequenceR|370|361|LRAIAKVIDT
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 LRAIAKVID 9
+R IAK+ID
Sbjct: 44 VRDIAKIID 52
74|SequenceR|375|366|KYFEILRAIA
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KYFEILRA 8
++F++LRA
Sbjct: 295 RFFKVLRA 302
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 KYFEILRA 8
++F++LRA
Sbjct: 295 RFFKVLRA 302
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 KYFEILRAI 9
+YFE+L+ +
Sbjct: 1173 EYFEVLKQL 1181
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 2 YFEILRAIA 10
+F+I RA+A
Sbjct: 84 FFKIKRAVA 92
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KYFEILRA 8
++F +LRA
Sbjct: 301 RFFRVLRA 308
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KYFEILRA 8
++F +LRA
Sbjct: 295 RFFRVLRA 302
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 KYFEILRA 8
++F +LRA
Sbjct: 301 RFFRVLRA 308
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 KYFEILRA 8
++F +LRA
Sbjct: 295 RFFRVLRA 302
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 KYFEILRAIA 10
++F++LR +A
Sbjct: 477 RFFQLLRLMA 486
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 KYFEILRAIA 10
++F++LR +A
Sbjct: 477 RFFQLLRLMA 486
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 1 KYFEILRAIA 10
++F++LR +A
Sbjct: 476 RFFQLLRLMA 485
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 1 KYFEILRAIA 10
++F++LR +A
Sbjct: 476 RFFQLLRLMA 485
75|SequenceR|380|371|GCSEHKYFEI
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 SEHKYFEI 10
SEH+Y+EI
Sbjct: 457 SEHEYYEI 464
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 106 GCGKHKVF 113
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 105 GCGKHKVF 112
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 105 GCGKHKVF 112
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 105 GCGKHKVF 112
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 119 GCGKHKVF 126
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 106 GCGKHKVF 113
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 112 GCGKHKVF 119
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 106 GCGKHKVF 113
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 112 GCGKHKVF 119
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 119 GCGKHKVF 126
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 118 GCGKHKVF 125
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 106 GCGKHKVF 113
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 106 GCGKHKVF 113
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 106 GCGKHKVF 113
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 106 GCGKHKVF 113
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 1 GCSEHKY 7
GCS+H Y
Sbjct: 471 GCSQHFY 477
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 GCSEHKYF 8
GC +HK F
Sbjct: 106 GCGKHKVF 113
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 1 GCSEHKY 7
GCS+H Y
Sbjct: 471 GCSQHFY 477
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 GCSEHKYFE 9
GCS ++F+
Sbjct: 2531 GCSREEFFQ 2539
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 GCSEHKYFE 9
GCS ++F+
Sbjct: 2531 GCSREEFFQ 2539
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 SEHKYFEI 10
S H+Y+EI
Sbjct: 456 SGHEYYEI 463
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 SEHKYFEI 10
S H+Y+EI
Sbjct: 456 SGHEYYEI 463
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GCSEHKYFEI 10
GC YFE+
Sbjct: 4212 GCCSTDYFEM 4221
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GCSEHKYFE 9
GC ++ YF+
Sbjct: 4187 GCCDNSYFD 4195
Query: 2 CSEHKYF 8
C++H +F
Sbjct: 2172 CNKHNFF 2178
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GCSEHKYFE 9
GC + YFE
Sbjct: 4528 GCCDVTYFE 4536
Query: 5 HKYFEI 10
+KYFEI
Sbjct: 4855 NKYFEI 4860
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 SEHKY 7
SEHKY
Sbjct: 76 SEHKY 80
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 HKYFEI 10
+KYFEI
Sbjct: 4842 YKYFEI 4847
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 5 HKYFEI 10
H+Y+EI
Sbjct: 458 HEYYEI 463
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 HKYFEI 10
+KYFEI
Sbjct: 4900 YKYFEI 4905
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 HKYFEI 10
+KYFEI
Sbjct: 4930 YKYFEI 4935
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 HKYFEI 10
+KYFEI
Sbjct: 4880 YKYFEI 4885
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 1 GCSEHKYFE 9
GCS KY +
Sbjct: 262 GCSGRKYVD 270
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 1 GCSEHKYFE 9
GCS+ Y E
Sbjct: 12 GCSDFIYLE 20
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 HKYFEI 10
HK+FE+
Sbjct: 582 HKFFEL 587
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 GCSEH 5
GC EH
Sbjct: 563 GCREH 567
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 1 GCSEH 5
GC EH
Sbjct: 452 GCPEH 456
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 1 GCSEH 5
GC EH
Sbjct: 452 GCPEH 456
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 5 HKYFEI 10
H YFE+
Sbjct: 46 HPYFEL 51
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 5 HKYFEI 10
H YFE+
Sbjct: 46 HPYFEL 51
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 CSEHKYF 8
C++H +F
Sbjct: 2172 CNKHNFF 2178
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 3 SEHKYFEI 10
+EH++F +
Sbjct: 219 NEHRFFSL 226
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 3 SEHKYFEI 10
+EH++F +
Sbjct: 219 NEHRFFSL 226
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 4 EHKYFEI 10
EHKY +I
Sbjct: 300 EHKYVKI 306
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 EHKYFEI 10
EHKY +I
Sbjct: 300 EHKYVKI 306
76|SequenceR|385|376|CPTCQGCSEH
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 CPTCQGCSE 9
CP+CQ S+
Sbjct: 1078 CPSCQQISK 1086
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 1 CPTCQGCSE 9
CP C C++
Sbjct: 69 CPNCLNCTD 77
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 CPTCQGCSE 9
CP C C++
Sbjct: 69 CPNCLNCTD 77
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 CPTCQGCSE 9
CP C C++
Sbjct: 69 CPNCLNCTD 77
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 CPTCQGCSE 9
CP C C++
Sbjct: 62 CPNCLNCTD 70
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 5 QGCSEH 10
+GCS+H
Sbjct: 470 EGCSQH 475
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 1 CPTCQGCSE 9
CP C C++
Sbjct: 69 CPNCLNCTD 77
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 1 CPTCQGCSE 9
CP C C++
Sbjct: 69 CPNCLNCTD 77
>sp|VE7_HPV36|PROTEIN E7|Human papillomavirus 36
Query: 1 CPTCQGCSEH 10
CP C+G EH
Sbjct: 90 CPECRGNCEH 99
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 4 CQGC 7
CQGC
Sbjct: 54 CQGC 57
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CPTCQ 5
CP CQ
Sbjct: 370 CPACQ 374
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CPTCQ 5
CP CQ
Sbjct: 370 CPACQ 374
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 CPTCQ 5
CP CQ
Sbjct: 53 CPFCQ 57
>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 4 CQGC 7
CQGC
Sbjct: 54 CQGC 57
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 4 CQGC 7
CQGC
Sbjct: 54 CQGC 57
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 1 CPTCQGCSEH 10
CPT EH
Sbjct: 291 CPTAWPAGEH 300
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 1 CPTCQGCSEH 10
CPT EH
Sbjct: 291 CPTAWPAGEH 300
>sp|VE7_HPV37|PROTEIN E7|Human papillomavirus 37
Query: 1 CPTCQGCSEH 10
CP C+G H
Sbjct: 84 CPNCRGKLRH 93
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 4 CQGCS 8
CQGC+
Sbjct: 54 CQGCT 58
Query: 4 CQGCSEH 10
CQ CS++
Sbjct: 63 CQWCSQY 69
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 5 QGCSEH 10
QG SEH
Sbjct: 488 QGASEH 493
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)
Query: 1 CPTCQGCSE 9
C T QG +E
Sbjct: 185 CVTAQGATE 193
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 1 CPTCQGCSE 9
C T QG +E
Sbjct: 185 CVTAQGATE 193
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 5 QGCSEH 10
QG SEH
Sbjct: 488 QGASEH 493
>sp|VE7_HPV09|PROTEIN E7|Human papillomavirus 9
Query: 1 CPTCQGCSEH 10
CP C+G H
Sbjct: 83 CPECRGRLRH 92
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 4 CQGCSEH 10
CQ CS++
Sbjct: 63 CQWCSQY 69
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CPTCQGCSEH 10
C TC G H
Sbjct: 210 CVTCYGAGAH 219
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CPTCQGCSEH 10
C TC G H
Sbjct: 210 CVTCYGAGAH 219
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CPTCQGCSEH 10
C TC G H
Sbjct: 210 CVTCYGAGAH 219
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CPTCQGCS 8
P C+GC+
Sbjct: 527 APLCRGCA 534
>sp|VE7_HPV19|PROTEIN E7|Human papillomavirus 19
Query: 1 CPTCQGCSEH 10
CP C+G H
Sbjct: 90 CPECRGNCNH 99
>sp|VE7_HPV20|PROTEIN E7|Human papillomavirus 20
Query: 1 CPTCQGCSEH 10
CP C+G +H
Sbjct: 90 CPDCRGNCKH 99
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 4 CQGCSEH 10
CQ CS++
Sbjct: 63 CQWCSQY 69
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 4 CQGCS 8
CQ CS
Sbjct: 137 CQSCS 141
Query: 6 GCSEH 10
GC EH
Sbjct: 563 GCREH 567
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 4 CQGCSEH 10
CQ CS++
Sbjct: 63 CQWCSQY 69
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 4 CQGCSEH 10
CQ CS++
Sbjct: 63 CQWCSQY 69
>sp|VE7_HPV47|PROTEIN E7|Human papillomavirus 47
Query: 1 CPTCQGCSEH 10
CP C+G +H
Sbjct: 91 CPECRGNCKH 100
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 4 CQGCSEH 10
CQ CS++
Sbjct: 63 CQWCSQY 69
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 4 CQGCSEH 10
CQ CS++
Sbjct: 63 CQWCSQY 69
>sp|VE7_HPV05|PROTEIN E7|Human papillomavirus 5
Query: 1 CPTCQGCSEH 10
CP C+G +H
Sbjct: 91 CPDCRGNCKH 100
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PTCQGCS 8
P C+GC+
Sbjct: 528 PLCRGCA 534
>sp|VE7_HPV5B|PROTEIN E7|Human papillomavirus type 5b
Query: 1 CPTCQGCSEH 10
CP C+G +H
Sbjct: 91 CPDCRGNCKH 100
>sp|VE7_HPV08|PROTEIN E7|Human papillomavirus type 8
Query: 1 CPTCQGCSEH 10
CP C+G +H
Sbjct: 91 CPECRGNCKH 100
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 4 CQGCSEH 10
CQ CS++
Sbjct: 63 CQWCSQY 69
>sp|VE7_HPV12|PROTEIN E7|Human papillomavirus 12
Query: 1 CPTCQGCSEH 10
CP C+G +H
Sbjct: 91 CPECRGNCKH 100
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 1 CPTCQGCSE 9
CP C C++
Sbjct: 59 CPNCLNCTD 67
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 CPTCQGCSE 9
CP C C++
Sbjct: 62 CPNCLNCTD 70
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 3 TCQGCSEH 10
+GCS+H
Sbjct: 468 NLEGCSQH 475
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 4 CQGCSEH 10
CQ CS++
Sbjct: 63 CQWCSQY 69
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 4 CQGCSEH 10
CQ CS++
Sbjct: 63 CQWCSQY 69
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 4 CQGCSEH 10
CQ CS++
Sbjct: 63 CQWCSQY 69
77|SequenceR|390|381|DVGERCPTCQ
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 2 VGERCPT 8
VG+RCPT
Sbjct: 461 VGKRCPT 467
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 5 RCPTCQ 10
RCP+CQ
Sbjct: 1077 RCPSCQ 1082
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 DVGERCPTCQ 10
D+GE P+C+
Sbjct: 2670 DIGESNPSCE 2679
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 VGERCPTC 9
+G CPTC
Sbjct: 140 LGGYCPTC 147
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 ERCPTC 9
E+CP C
Sbjct: 1148 EQCPQC 1153
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 ERCPTC 9
E+CP C
Sbjct: 1148 EQCPQC 1153
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 5 RCPTC 9
RCP C
Sbjct: 1317 RCPKC 1321
>sp|Z_LYCVA|RING finger protein Z|Lymphocytic choriomeningitis virus (strain
Query: 1 DVGERCPTCQ 10
V +RCP C+
Sbjct: 60 SVSDRCPLCK 69
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 VGERCPT 8
V RCPT
Sbjct: 350 VAARCPT 356
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 VGERCPT 8
V RCPT
Sbjct: 350 VAARCPT 356
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 6 CPTCQ 10
CP CQ
Sbjct: 370 CPACQ 374
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 6 CPTCQ 10
CP CQ
Sbjct: 370 CPACQ 374
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 VGERCPT 8
V RCPT
Sbjct: 350 VAARCPT 356
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 4 ERCPTC 9
E CP C
Sbjct: 17 EECPKC 22
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 4 ERCPTC 9
E CP C
Sbjct: 17 EECPKC 22
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 4 ERCPTC 9
E CP C
Sbjct: 17 EECPKC 22
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 VGERCPT 8
V RCPT
Sbjct: 350 VAARCPT 356
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 VGERCPT 8
V RCPT
Sbjct: 350 VAARCPT 356
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 2 VGERCPT 8
V RCPT
Sbjct: 70 VAARCPT 76
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 2 VGERCPT 8
V RCPT
Sbjct: 70 VAARCPT 76
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 2 VGERCPT 8
V RCPT
Sbjct: 70 VAARCPT 76
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 2 VGERCPT 8
V RCPT
Sbjct: 70 VAARCPT 76
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 4 ERCPTC 9
E CP C
Sbjct: 17 EECPKC 22
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 VGERCPT 8
V RCPT
Sbjct: 350 VAARCPT 356
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VGERCP 7
+GE CP
Sbjct: 570 IGESCP 575
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VGERCP 7
+GE CP
Sbjct: 570 IGESCP 575
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VGERCP 7
+GE CP
Sbjct: 570 IGESCP 575
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 2 VGERCPT 8
V RCPT
Sbjct: 350 VAARCPT 356
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 VGERCP 7
+GE CP
Sbjct: 542 IGEHCP 547
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 VGERCP 7
+GE CP
Sbjct: 542 IGEHCP 547
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 6 CPTCQ 10
CP CQ
Sbjct: 53 CPFCQ 57
>sp|VE6_HPV63|PROTEIN E6|Human papillomavirus type 63
Query: 1 DVGERCPTC 9
++G RC TC
Sbjct: 95 NIGLRCVTC 103
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 3 GERCPT 8
GE CP+
Sbjct: 850 GEECPS 855
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 DVGERCP 7
D+G CP
Sbjct: 144 DIGNWCP 150
Query: 5 RCPTC 9
RC TC
Sbjct: 2935 RCETC 2939
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 VGERC 6
VGERC
Sbjct: 353 VGERC 357
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 DVGERC 6
DVGE C
Sbjct: 159 DVGEDC 164
Query: 2 VGERCPT 8
V RCPT
Sbjct: 356 VETRCPT 362
Query: 2 VGERCP 7
VG+ CP
Sbjct: 924 VGKECP 929
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 GERCPT 8
GE CP+
Sbjct: 850 GEECPS 855
>sp|VE7_HPV38|PROTEIN E7|Human papillomavirus 38
Query: 1 DVGERCPTCQ 10
DV CPTC+
Sbjct: 83 DVRLLCPTCR 92
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 VGERC 6
VGERC
Sbjct: 366 VGERC 370
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 ERCPTC 9
E CP C
Sbjct: 1148 EPCPEC 1153
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 ERCPTC 9
E CP C
Sbjct: 1148 EPCPEC 1153
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 VGERCPT 8
V RCPT
Sbjct: 348 VEARCPT 354
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 DVGERCPT 8
D+GE C +
Sbjct: 710 DIGETCTS 717
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 GERCP 7
GE CP
Sbjct: 933 GEECP 937
Query: 5 RCPTC 9
RC TC
Sbjct: 2970 RCETC 2974
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 3 GERCP 7
G+RCP
Sbjct: 287 GDRCP 291
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 5 RCPTC 9
RC TC
Sbjct: 2966 RCETC 2970
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 4 ERCPT 8
+RCPT
Sbjct: 296 QRCPT 300
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 5 RCPTC 9
RC TC
Sbjct: 2968 RCETC 2972
>sp|VE8E2_HPV51|PROTEIN E8^E2C|Human papillomavirus 51
Query: 4 ERCPTC 9
+RC TC
Sbjct: 11 QRCSTC 16
>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25
Query: 1 DVGERCPTCQ 10
D+ RC TC
Sbjct: 113 DIDVRCQTCM 122
>sp|VE6_HPV31|PROTEIN E6|Human papillomavirus 31
Query: 1 DVGERCPTCQ 10
D+ RC TCQ
Sbjct: 98 DLLIRCITCQ 107
>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)
Query: 4 ERCPTCQ 10
+ CP C+
Sbjct: 217 DNCPICR 223
>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)
Query: 4 ERCPTCQ 10
+ CP C+
Sbjct: 217 DNCPICR 223
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 4 ERCPTCQ 10
+ CP C+
Sbjct: 220 DNCPICR 226
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 4 ERCPTCQ 10
+ CP C+
Sbjct: 220 DNCPICR 226
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 2 VGERCPT 8
+G+ CPT
Sbjct: 588 IGDLCPT 594
>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 ERCPTCQ 10
+ CP C+
Sbjct: 220 DNCPICR 226
>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)
Query: 4 ERCPTCQ 10
+ CP C+
Sbjct: 220 DNCPICR 226
>sp|Z_LASSJ|RING finger protein Z|Lassa virus (strain Mouse/Sierra
Query: 2 VGERCPTCQ 10
V RCP C+
Sbjct: 60 VSNRCPICK 68
>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /
Query: 4 ERCPTCQ 10
+ CP C+
Sbjct: 220 DNCPICR 226
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 1 DVGERCPTCQ 10
D GE C C+
Sbjct: 453 DCGEICTGCK 462
78|SequenceR|395|386|VKNMWDVGER
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 1 VKNMWDVGER 10
+ N+W G+R
Sbjct: 305 LANLWQTGKR 314
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 1 VKNMWDVGER 10
+ N+W G+R
Sbjct: 305 LANLWQTGKR 314
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VKNMWDVGER 10
VK W++G++
Sbjct: 517 VKGAWNIGQQ 526
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VKNMWDVGER 10
VK W++G++
Sbjct: 517 VKGAWNIGQQ 526
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 VKNMWDVGER 10
V+ +W GER
Sbjct: 216 VRGIWGKGER 225
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 VKNMWDVGER 10
V+ +W GER
Sbjct: 216 VRGIWGKGER 225
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 VKNMWDVGER 10
V+ +W GER
Sbjct: 216 VRGVWGKGER 225
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 VKNMWDVGER 10
V+ +W GER
Sbjct: 216 VRGVWGKGER 225
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 VKNMWDVGER 10
V+ +W GER
Sbjct: 216 VRGVWGKGER 225
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 VKNMWDVGER 10
V+ +W GER
Sbjct: 216 VRGVWGKGER 225
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 VKNMWDVGER 10
V+ +W GER
Sbjct: 216 VRGVWGKGER 225
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 VKNMWDVGER 10
V+ +W GER
Sbjct: 216 VRGVWGKGER 225
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 VKNMWDVGER 10
V+ +W GER
Sbjct: 216 VRGVWGKGER 225
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 KNMWDVGER 10
K W++GE+
Sbjct: 518 KGAWNIGEQ 526
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 KNMWDVGER 10
K W++GE+
Sbjct: 518 KGAWNIGEQ 526
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 KNMWD 6
KNMW+
Sbjct: 130 KNMWE 134
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 KNMWD 6
KNMW+
Sbjct: 130 KNMWE 134
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 4 MWDVGE 9
+WDVG+
Sbjct: 482 IWDVGK 487
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 4 MWDVGE 9
+WDVG+
Sbjct: 482 IWDVGK 487
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 VKNMWDVGE 9
V +WD+G+
Sbjct: 499 VFRVWDIGQ 507
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 VKNMWDVGE 9
V +WD+G+
Sbjct: 499 VFRVWDIGQ 507
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 VKNMWDVGE 9
V +WD+G+
Sbjct: 498 VFRVWDIGQ 506
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 VKNMWDVGE 9
V +WD+G+
Sbjct: 498 VFRVWDIGQ 506
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 VKNMWDVGE 9
V +WD+G+
Sbjct: 498 VFRVWDIGQ 506
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 VKNMWDVGE 9
V +WD+G+
Sbjct: 498 VFRVWDIGQ 506
>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35
Query: 2 KNMWDV 7
KN+W+V
Sbjct: 182 KNIWEV 187
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 1 VKNMWDVGER 10
+ ++W+ G+R
Sbjct: 305 LAHLWETGKR 314
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 KNMWDVG 8
KN W VG
Sbjct: 13 KNQWVVG 19
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KNMWDVG 8
KN W VG
Sbjct: 13 KNQWVVG 19
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KNMWDVG 8
KN W VG
Sbjct: 13 KNQWVVG 19
>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)
Query: 2 KNMWDVG 8
KN W VG
Sbjct: 13 KNQWVVG 19
>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56
Query: 2 KNMWDV 7
KN+W+V
Sbjct: 124 KNIWEV 129
79|SequenceR|400|391|VFRAMVKNMW
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 2 FRAMVKNMW 10
FR +V+ +W
Sbjct: 133 FRTLVQRIW 141
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 2 FRAMVKNMW 10
FR +V+ +W
Sbjct: 133 FRTLVQRIW 141
>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain
Query: 2 FRAMVKNM 9
FRAM NM
Sbjct: 393 FRAMCSNM 400
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 2 FRAMVKNMW 10
FR + NMW
Sbjct: 217 FRCSMINMW 225
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 2 FRAMVKNMW 10
FR + NMW
Sbjct: 216 FRCSMINMW 224
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 FRAMVKNMW 10
F+A+ K +W
Sbjct: 122 FKALYKALW 130
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 FRAMVKNMW 10
F+A+ K +W
Sbjct: 122 FKALYKALW 130
>sp|NSP3_ROTB2|NON-STRUCTURAL protein 3|Rotavirus X (isolate
Query: 1 VFRAMVKN 8
+FRAM+++
Sbjct: 29 MFRAMIRD 36
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 VFRAMVKN 8
VFR +V+N
Sbjct: 2020 VFRELVRN 2027
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 VFRAMVKN 8
VFR +V+N
Sbjct: 2020 VFRELVRN 2027
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VFRAMVKN 8
VFR +V+N
Sbjct: 2020 VFRELVRN 2027
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 VFRAMVKN 8
VFR +V+N
Sbjct: 2020 VFRELVRN 2027
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 VFRAMVKN 8
VFR +V+N
Sbjct: 2020 VFRELVRN 2027
80|SequenceR|405|396|RADGRVFRAM
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 ADGRVFR 8
AD RVF+
Sbjct: 713 ADSRVFK 719
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 RADGRVF 7
+ DGR+F
Sbjct: 556 KPDGRIF 562
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 RADGRVF 7
+ DGR+F
Sbjct: 556 KPDGRIF 562
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 RADGRVF 7
+ DGR+F
Sbjct: 557 KPDGRIF 563
81|SequenceR|410|401|DIEAPRADGR
>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)
Query: 1 DIEAPRAD 8
D+EA RAD
Sbjct: 331 DVEASRAD 338
>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DIEAPRAD 8
D+EA RAD
Sbjct: 331 DVEASRAD 338
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 DIEAPR 6
DIE+PR
Sbjct: 1849 DIESPR 1854
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 DIEAPR 6
DIE+PR
Sbjct: 1849 DIESPR 1854
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 IEAPRAD 8
I APR+D
Sbjct: 480 ISAPRSD 486
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 1 DIEAPRADG 9
D+E+PR G
Sbjct: 324 DLESPRGFG 332
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 EAPRADGR 10
E PR GR
Sbjct: 580 ETPRVSGR 587
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 EAPRADGR 10
E PR GR
Sbjct: 580 ETPRVSGR 587
82|SequenceR|415|406|IEWLSDIEAP
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 3 WLSDIEAP 10
WLS++E P
Sbjct: 91 WLSEVERP 98
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 EWLSDIEA 9
EW+ D EA
Sbjct: 169 EWMDDFEA 176
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 EWLSDIEA 9
EW+ D EA
Sbjct: 169 EWMDDFEA 176
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IEWLSDI 7
IEWLSD+
Sbjct: 232 IEWLSDL 238
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 1 IEWLSDI 7
IEWLSD+
Sbjct: 232 IEWLSDL 238
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 1 IEWLSDI 7
IEWLSD+
Sbjct: 232 IEWLSDL 238
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 1 IEWLSDIEAP 10
+ +LSD+E P
Sbjct: 684 VRYLSDLEEP 693
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 IEWLSDIEAP 10
+ +LSD+E P
Sbjct: 657 VRYLSDLEEP 666
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 IEWLSDIEAP 10
+ +LSD+E P
Sbjct: 662 VRYLSDLEEP 671
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 IEWLSD 6
++WLSD
Sbjct: 1183 VDWLSD 1188
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 IEWLSD 6
++WLSD
Sbjct: 1183 VDWLSD 1188
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 IEWLSD 6
++WLSD
Sbjct: 1183 VDWLSD 1188
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 EWLSDIEAP 10
E+LSD+ P
Sbjct: 513 EYLSDLYTP 521
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EWLSDIEAP 10
E+LSD+ P
Sbjct: 513 EYLSDLYTP 521
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EWLSDIEAP 10
E+LSD+ P
Sbjct: 514 EYLSDLYTP 522
>sp|CAHH_MONPZ|CELL surface-binding protein OPG105|Monkeypox virus (strain
Query: 1 IEWLSDI 7
++WLSD+
Sbjct: 252 MKWLSDL 258
>sp|CAHH_MONPV|CELL surface-binding protein OPG105|Monkeypox virus (MPXV)
Query: 1 IEWLSDI 7
++WLSD+
Sbjct: 252 MKWLSDL 258
>sp|UL124_HCMVM|UNCHARACTERIZED protein UL124|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EWLSDIEAP 10
E SD+EAP
Sbjct: 119 EQGSDVEAP 127
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 WLSDIE 8
WLS+IE
Sbjct: 2215 WLSEIE 2220
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 WLSDIE 8
WLS+IE
Sbjct: 2215 WLSEIE 2220
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 WLSDIE 8
WLS+IE
Sbjct: 2211 WLSEIE 2216
>sp|CAHH_VARV|CELL surface-binding protein OPG105|Variola virus
Query: 1 IEWLSDI 7
+ WLSD+
Sbjct: 252 MRWLSDL 258
>sp|CAHH_VAR67|CELL surface-binding protein OPG105|Variola virus (isolate
Query: 1 IEWLSDI 7
+ WLSD+
Sbjct: 252 MRWLSDL 258
>sp|CAHH_VACCA|CELL surface-binding protein OPG105|Vaccinia virus (strain Ankara)
Query: 1 IEWLSDI 7
+ WLSD+
Sbjct: 252 MRWLSDL 258
>sp|CAHH_VACCC|CELL surface-binding protein OPG105|Vaccinia virus (strain Copenhagen)
Query: 1 IEWLSDI 7
+ WLSD+
Sbjct: 252 MRWLSDL 258
>sp|CAHH_VACCT|CELL surface-binding protein OPG105|Vaccinia virus (strain Tian Tan)
Query: 1 IEWLSDI 7
+ WLSD+
Sbjct: 252 MRWLSDL 258
83|SequenceR|420|411|EIQKSIEWLS
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1133 KIQKFIEWL 1141
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1123 KIQKFIEWL 1131
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1124 KIQKFIEWL 1132
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1132 KIQKFIEWL 1140
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1122 KIQKFIEWL 1130
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1122 KIQKFIEWL 1130
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1140 KIQKFIEWL 1148
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1132 KIQKFIEWL 1140
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1123 KIQKFIEWL 1131
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1124 KIQKFIEWL 1132
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1142 KIQKFIEWL 1150
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1134 KIQKFIEWL 1142
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1130 KIQKFIEWL 1138
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1135 KIQKFIEWL 1143
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1126 KIQKFIEWL 1134
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 EIQKSIEWL 9
+IQK IEWL
Sbjct: 1121 KIQKFIEWL 1129
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 EIQKSIEWL 9
+IQK I+WL
Sbjct: 1124 KIQKFIDWL 1132
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 EIQKSIEWLS 10
+IQ+S WLS
Sbjct: 2033 QIQRSPYWLS 2042
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 EIQKSIEWLS 10
EIQKSI LS
Sbjct: 85 EIQKSISELS 94
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 EIQKSIEWLS 10
+IQ+S WLS
Sbjct: 2033 QIQRSPYWLS 2042
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 EIQKSIEW 8
EI +SI W
Sbjct: 2141 EIHESIRW 2148
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 EIQKSIEW 8
EI +SI W
Sbjct: 2140 EIHESIRW 2147
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 EIQKSIEW 8
EI +SI W
Sbjct: 2142 EIHESIRW 2149
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 EIQKSIEW 8
EI +SI W
Sbjct: 2144 EIHESIRW 2151
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 EIQKSIEW 8
EI +SI W
Sbjct: 2144 EIHESIRW 2151
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 EIQKSIEW 8
EI +SI W
Sbjct: 2149 EIHESIRW 2156
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 EIQKSIEW 8
EI +SI W
Sbjct: 2141 EIHESIRW 2148
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 EIQKSIEW 8
EI +SI W
Sbjct: 2141 EIHESIRW 2148
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 EIQKSIEW 8
EI +SI W
Sbjct: 2129 EIHESIRW 2136
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 EIQKSIEW 8
EI SI W
Sbjct: 2099 EIHDSIRW 2106
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 QKSIEWL 9
QK+++W+
Sbjct: 1132 QKAVDWI 1138
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 2 IQKSIEWL 9
+QKS+ W
Sbjct: 89 VQKSLSWF 96
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 2 IQKSIEWL 9
+QKS+ W
Sbjct: 89 VQKSLSWF 96
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 EIQKSIEW 8
E+Q+++ W
Sbjct: 84 EVQQNLRW 91
84|SequenceR|425|416|CITHGEIQKS
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 HGEIQKS 10
HGEIQ S
Sbjct: 1864 HGEIQNS 1870
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 CITHGE 6
CI HGE
Sbjct: 352 CIEHGE 357
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 CITHGEIQK 9
C++H ++QK
Sbjct: 318 CMSHPQLQK 326
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CITHGEIQKS 10
C T GE++++
Sbjct: 116 CFTAGEVRRA 125
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CITHGEIQKS 10
C T GE++++
Sbjct: 116 CFTAGEVRRA 125
>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CITHGEIQKS 10
C T GE++++
Sbjct: 116 CFTAGEVRRA 125
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CITHGEIQKS 10
C T GE++++
Sbjct: 116 CFTAGEVRRA 125
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CITHGEIQKS 10
C T GE++++
Sbjct: 116 CFTAGEVRRA 125
>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CITHGEIQKS 10
C T GE++++
Sbjct: 116 CFTAGEVRRA 125
>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CITHGEIQKS 10
C T GE++++
Sbjct: 116 CFTAGEVRRA 125
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 CITHGE 6
C+ HGE
Sbjct: 347 CVEHGE 352
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CITHGEIQKS 10
C T GE++++
Sbjct: 116 CFTAGEVRRA 125
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CITHGEIQKS 10
C T GE++++
Sbjct: 116 CFTAGEVRRA 125
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 ITHGEIQKS 10
I GE++KS
Sbjct: 1656 IAQGEVEKS 1664
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 ITHGEIQKS 10
I GE++KS
Sbjct: 1656 IAQGEVEKS 1664
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 CITHGE 6
C THG+
Sbjct: 2219 CTTHGK 2224
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 3 THGEIQKS 10
THGEI +
Sbjct: 568 THGEINHT 575
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 CITHG 5
C THG
Sbjct: 2220 CTTHG 2224
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 2 ITHGEIQK 9
I HG+I K
Sbjct: 162 IAHGDIGK 169
85|SequenceR|430|421|GDGLACITHG
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 DGLACITHG 10
DG AC T G
Sbjct: 409 DGFACTTCG 417
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 DGLACITHG 10
DG AC T G
Sbjct: 409 DGFACTTCG 417
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GDGLACITH 9
G G+A +TH
Sbjct: 492 GTGIAAVTH 500
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GDGLACITH 9
G G+A +TH
Sbjct: 492 GTGIAAVTH 500
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GDGLACITH 9
G G+A +TH
Sbjct: 492 GTGIAAVTH 500
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 GLACITHG 10
G+AC T G
Sbjct: 1340 GVACATAG 1347
>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GDGLACIT 8
GD L CI+
Sbjct: 211 GDALFCIS 218
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 3 GLACIT 8
G+AC+T
Sbjct: 1167 GVACVT 1172
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 2 DGLACITHG 10
D L C T G
Sbjct: 261 DDLTCCTRG 269
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 2 DGLACITHG 10
D L C T G
Sbjct: 270 DDLTCCTRG 278
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 2 DGLACITHG 10
D L C T G
Sbjct: 270 DDLTCCTRG 278
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 LACITH 9
LAC+ H
Sbjct: 876 LACVVH 881
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 GDGLAC 6
G+GL C
Sbjct: 8 GEGLGC 13
86|SequenceR|435|426|VPWAAGDGLA
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 3 WAAGDGL 9
WA GDGL
Sbjct: 364 WATGDGL 370
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 3 WAAGDGL 9
WA GDGL
Sbjct: 364 WATGDGL 370
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 3 WAAGDGL 9
WA GDGL
Sbjct: 364 WATGDGL 370
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 3 WAAGDGL 9
WA GDGL
Sbjct: 364 WATGDGL 370
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 3 WAAGDGL 9
WA GDGL
Sbjct: 364 WATGDGL 370
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 3 WAAGDGL 9
W AGDG+
Sbjct: 446 WVAGDGI 452
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 3 WAAGDGL 9
W AGDG+
Sbjct: 455 WVAGDGI 461
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 VPWAAGDGL 9
V W+ GDG+
Sbjct: 417 VSWSDGDGI 425
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 3 WAAGDG 8
W AGDG
Sbjct: 462 WVAGDG 467
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 3 WAAGDG 8
W AGDG
Sbjct: 456 WVAGDG 461
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 3 WAAGDG 8
W AGDG
Sbjct: 436 WVAGDG 441
>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b
Query: 3 WAAGDG 8
W AGDG
Sbjct: 467 WVAGDG 472
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 3 WAAGDG 8
W AGDG
Sbjct: 450 WVAGDG 455
>sp|VE8E2_HPV05|PROTEIN E8^E2C|Human papillomavirus 5
Query: 3 WAAGDG 8
W AGDG
Sbjct: 276 WVAGDG 281
>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 PWAAGDGL 9
PW GD L
Sbjct: 97 PWEKGDTL 104
>sp|TRX2_HHV6U|TRIPLEX capsid protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PWAAGDGL 9
PW GD L
Sbjct: 97 PWEKGDTL 104
>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5
Query: 3 WAAGDG 8
W AGDG
Sbjct: 467 WVAGDG 472
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VPWAAG 6
+PWAAG
Sbjct: 497 LPWAAG 502
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PWAAGDG 8
PW G+G
Sbjct: 182 PWTVGEG 188
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 VPWAAGDGL 9
+ W GDG+
Sbjct: 1183 ISWTIGDGI 1191
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 VPWAAGD 7
+PW+ GD
Sbjct: 229 IPWSLGD 235
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 WAAGDGL 9
W GDG+
Sbjct: 1185 WTIGDGI 1191
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 VPWAAGDG 8
+PW +G G
Sbjct: 500 LPWQSGSG 507
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 VPWAAGDG 8
+PW +G G
Sbjct: 500 LPWQSGSG 507
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VPWAAGDG 8
+PW +G G
Sbjct: 500 LPWQSGSG 507
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 VPWAAGDG 8
+PW +G G
Sbjct: 500 LPWQSGSG 507
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 VPWAAGDG 8
+PW +G G
Sbjct: 500 LPWQSGSG 507
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 VPWAAGDG 8
+PW +G G
Sbjct: 500 LPWQSGSG 507
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 VPWAAGDG 8
+PW +G G
Sbjct: 500 LPWQSGSG 507
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VPWAAGDG 8
+PW +G G
Sbjct: 500 LPWQSGSG 507
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 VPWAAGDG 8
+PW +G G
Sbjct: 500 LPWQSGSG 507
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VPWAAGDGL 9
V W GD L
Sbjct: 100 VTWEKGDAL 108
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VPWAAGDGL 9
V W GD L
Sbjct: 100 VTWEKGDAL 108
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 VPWAAGDG 8
+PW +G G
Sbjct: 500 LPWQSGSG 507
>sp|VE8E2_HPV47|PROTEIN E8^E2C|Human papillomavirus 47
Query: 3 WAAGDGL 9
W AGD +
Sbjct: 268 WVAGDSI 274
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 3 WAAGDGL 9
W AGD +
Sbjct: 459 WVAGDSI 465
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VPWAAG 6
+PWA+G
Sbjct: 496 LPWASG 501
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VPWAAGD 7
+ WA GD
Sbjct: 399 IAWATGD 405
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VPWAAGD 7
+ WA GD
Sbjct: 399 IAWATGD 405
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 VPWAAGDG 8
+PW +G G
Sbjct: 495 LPWQSGTG 502
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 VPWAAGDGL 9
V W+A DG+
Sbjct: 150 VKWSARDGV 158
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 VPWAAGDG 8
+PW G+G
Sbjct: 486 LPWKHGEG 493
>sp|EV45_HHV1M|ENVELOPE protein UL45|Human herpesvirus 1 (strain MP)
Query: 3 WAAGDGL 9
W +GDG+
Sbjct: 118 WVSGDGI 124
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 3 WAAGD 7
W AGD
Sbjct: 447 WVAGD 451
>sp|EV45_HHV1K|ENVELOPE protein UL45|Human herpesvirus 1 (strain KOS)
Query: 3 WAAGDGL 9
W +GDG+
Sbjct: 118 WVSGDGI 124
>sp|EV45_HHV11|ENVELOPE protein UL45|Human herpesvirus 1 (strain 17)
Query: 3 WAAGDGL 9
W +GDG+
Sbjct: 118 WVSGDGI 124
>sp|VE8E2_HPV08|PROTEIN E8^E2C|Human papillomavirus type 8
Query: 3 WAAGD 7
W AGD
Sbjct: 260 WVAGD 264
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 3 WAAGD 7
W AGD
Sbjct: 451 WVAGD 455
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 3 WAAGDGL 9
W AG G+
Sbjct: 955 WIAGSGV 961
>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57
Query: 3 WAAGDG 8
WA G+G
Sbjct: 147 WACGNG 152
>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24
Query: 3 WAAGDG 8
W A DG
Sbjct: 420 WVAADG 425
87|SequenceR|440|431|RILGQVPWAA
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 4 GQVPWA 9
+VPWA
Sbjct: 1066 AEVPWA 1071
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 4 GQVPWA 9
+VPWA
Sbjct: 1066 AEVPWA 1071
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 ILGQVPW 8
ILG V W
Sbjct: 1367 ILGTVSW 1373
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 ILGQVPW 8
ILG V W
Sbjct: 1343 ILGTVSW 1349
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 ILGQVPW 8
ILG V W
Sbjct: 1367 ILGTVSW 1373
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 ILGQVPW 8
ILG V W
Sbjct: 1343 ILGTVSW 1349
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 1 RILGQVPWA 9
RILG W+
Sbjct: 231 RILGAFQWS 239
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RILGQVPW 8
R LG+V W
Sbjct: 1408 RKLGEVSW 1415
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 2 ILGQVPWAA 10
ILG++ W +
Sbjct: 829 ILGEIQWVS 837
88|SequenceR|445|436|EPRFHRILGQ
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 EPRFHRILGQ 10
+P+F + LGQ
Sbjct: 2400 DPKFEKQLGQ 2409
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 EPRFHRILGQ 10
+P+F + LGQ
Sbjct: 2400 DPKFEKQLGQ 2409
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 EPRFHRILGQ 10
+P+F + LGQ
Sbjct: 2400 DPKFEKQLGQ 2409
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 EPRFHRILGQ 10
+P+F + LGQ
Sbjct: 2400 DPKFEKQLGQ 2409
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EPRFHRILGQ 10
+P+F + LGQ
Sbjct: 2401 DPKFEKQLGQ 2410
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 EPRFHRILGQ 10
+P+F + LGQ
Sbjct: 2404 DPKFEKQLGQ 2413
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EPRFHRILGQ 10
+P+F + LGQ
Sbjct: 2404 DPKFEKQLGQ 2413
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EPRFHRILGQ 10
+P+F + LGQ
Sbjct: 2404 DPKFEKQLGQ 2413
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 EPRFHRILGQ 10
+P+F + LGQ
Sbjct: 2400 DPKFEKQLGQ 2409
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EPRFHRILGQ 10
+P+F + LGQ
Sbjct: 2404 DPKFEKQLGQ 2413
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EPRFHRILGQ 10
+P+F + LGQ
Sbjct: 2404 DPKFEKQLGQ 2413
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EPRFHRILGQ 10
+P+F + LGQ
Sbjct: 2404 DPKFEKQLGQ 2413
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 EPRFHRILG 9
EP F ++LG
Sbjct: 1055 EPEFVKVLG 1063
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 EPRFHRILG 9
EP F ++LG
Sbjct: 1055 EPEFVKVLG 1063
>sp|ORF5_MERS1|NON-STRUCTURAL protein ORF5|Middle East respiratory syndrome-related coronavirus
Query: 2 PRFHRI 7
P FHRI
Sbjct: 18 PAFHRI 23
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 2 PRFHRIL 8
PRFH+ +
Sbjct: 556 PRFHKTV 562
>sp|VE6_HPV52|PROTEIN E6|Human papillomavirus 52
Query: 3 RFHRILGQ 10
RFH I+G+
Sbjct: 124 RFHNIMGR 131
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 2 PRFHRILGQ 10
PR R+LG+
Sbjct: 78 PRVDRMLGR 86
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 2 PRFHRILGQ 10
PR R+LG+
Sbjct: 78 PRVDRMLGR 86
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 EPRFHRIL 8
EP +H+ L
Sbjct: 2073 EPNYHKAL 2080
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 2 PRFHRILG 9
P HRI+G
Sbjct: 205 PTHHRIVG 212
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 3 RFHRILG 9
R H+I+G
Sbjct: 159 RMHKIIG 165
>sp|VE7_HPV45|PROTEIN E7|Human papillomavirus 45
Query: 1 EPRFHRIL 8
EP+ H+IL
Sbjct: 56 EPQRHKIL 63
89|SequenceR|450|441|MREELEPRFH
>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P
Query: 4 ELEPRF 9
E+EPRF
Sbjct: 27 EIEPRF 32
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 REELEPRF 9
R+EL+PR+
Sbjct: 2059 RKELKPRW 2066
>sp|NCAP_BUNYW|NUCLEOPROTEIN virus (BUNV)
Query: 2 REELEPRF 9
R+E+EP++
Sbjct: 169 RKEMEPKY 176
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 4 ELEPRFH 10
EL P FH
Sbjct: 325 ELSPYFH 331
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 EELEPRF 9
EELE RF
Sbjct: 1065 EELEIRF 1071
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 EELEPRF 9
EELE RF
Sbjct: 1065 EELEIRF 1071
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 EELEPRF 9
EELE RF
Sbjct: 1061 EELEIRF 1067
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 4 ELEPRFH 10
EL P FH
Sbjct: 325 ELSPFFH 331
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 MREELEPRFH 10
+ +EL+ R+H
Sbjct: 92 LTDELKTRYH 101
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 1 MREELEPRFH 10
+ +EL+ R+H
Sbjct: 92 LTDELKTRYH 101
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 MREELEPRFH 10
+ +EL+ R+H
Sbjct: 92 LTDELKTRYH 101
>sp|PG087_VARV|LATE transcription elongation factor OPG087|Variola virus
Query: 1 MREELEPRFH 10
+ EEL FH
Sbjct: 62 LSEELSMEFH 71
>sp|PG087_VAR67|LATE transcription elongation factor OPG087|Variola virus (isolate
Query: 1 MREELEPRFH 10
+ EEL FH
Sbjct: 62 LSEELSMEFH 71
>sp|PG087_VACCC|LATE transcription elongation factor OPG087|Vaccinia virus (strain
Query: 1 MREELEPRFH 10
+ EEL FH
Sbjct: 62 LSEELSMEFH 71
>sp|PG087_MONPV|LATE transcription elongation factor OPG087|Monkeypox virus (MPXV)
Query: 1 MREELEPRFH 10
+ EEL FH
Sbjct: 62 LSEELSMEFH 71
90|SequenceR|455|446|QAFRQMREEL
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 AFRQMREEL 10
AF Q+ EEL
Sbjct: 1241 AFHQLAEEL 1249
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 AFRQMREEL 10
AF Q+ EEL
Sbjct: 1241 AFHQLAEEL 1249
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 AFRQMREEL 10
AF Q+ EEL
Sbjct: 1241 AFHQLAEEL 1249
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 AFRQMREEL 10
AF Q+ EEL
Sbjct: 1241 AFHQLAEEL 1249
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 AFRQMREEL 10
AF Q+ EEL
Sbjct: 1241 AFHQLAEEL 1249
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 AFRQMREEL 10
AF Q+ EEL
Sbjct: 1239 AFHQLAEEL 1247
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 QAFRQM 6
QAFR+M
Sbjct: 128 QAFREM 133
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 AFRQMREEL 10
AF Q+R+E+
Sbjct: 907 AFEQVRDEV 915
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 QAFRQMREEL 10
+ FR M E+L
Sbjct: 1755 EGFRAMHEQL 1764
>sp|PG130_VACCC|39KDA core protein OPG130|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 RQMREEL 10
RQ+RE+L
Sbjct: 50 RQLREQL 56
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 4 RQMREEL 10
RQ+RE+L
Sbjct: 50 RQLREQL 56
91|SequenceR|464|451|SAAQRAQHQQAFRQ
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 AAQRAQHQQA 11
A +R+QH QA
Sbjct: 11 ALRRSQHMQA 20
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 5 RAQHQQAFRQ 14
R +HQ AF++
Sbjct: 383 RQEHQLAFQK 392
>sp|YLR3_EBVP3|UNCHARACTERIZED protein BLRF3|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 1 SAAQRAQHQQAFR 13
SA + A H+ FR
Sbjct: 140 SAPRHASHRPVFR 152
THE END