1|SequenceR|10|1|RLGPASLVAM
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 RLGPASLV 8
R+GP SLV
Sbjct: 17 RVGPRSLV 24
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 1 RLGPASLV 8
+ GP+SLV
Sbjct: 295 KAGPSSLV 302
>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)
Query: 1 RLGPASL 7
RLGP+S+
Sbjct: 193 RLGPSSV 199
>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)
Query: 1 RLGPASL 7
RLGP+S+
Sbjct: 193 RLGPSSV 199
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 RLGPASLV 8
RLGPA V
Sbjct: 1156 RLGPAQPV 1163
2|SequenceR|15|6|LIRFGRLGPA
>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 LIRFGRLGPA 10
L+R RLGP
Sbjct: 132 LVRVNRLGPG 141
>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 LIRFGRLGPA 10
L+R RLGP
Sbjct: 132 LVRVNRLGPG 141
>sp|VP40_EBOZM|MATRIX protein VP40|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 LIRFGRLGPA 10
L+R RLGP
Sbjct: 132 LVRVNRLGPG 141
>sp|VP40_EBOZ5|MATRIX protein VP40|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 LIRFGRLGPA 10
L+R RLGP
Sbjct: 132 LVRVNRLGPG 141
>sp|VP40_EBOG4|MATRIX protein VP40|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 LIRFGRLGPA 10
L+R RLGP
Sbjct: 132 LVRVNRLGPG 141
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 IRFGRLG 8
IRF RLG
Sbjct: 465 IRFNRLG 471
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 IRFGRLG 8
IRF RLG
Sbjct: 465 IRFNRLG 471
>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 294 VRFSRLG 300
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 296 VRFSRLG 302
>sp|VL2_HPV67|MINOR capsid protein L2|Human papillomavirus 67
Query: 2 IRFGRLG 8
IRF RLG
Sbjct: 299 IRFSRLG 305
>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11
Query: 1 LIRFGRLG 8
L+RF R+G
Sbjct: 292 LVRFSRIG 299
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 LIRFGRLG 8
L+RF R+G
Sbjct: 295 LVRFSRIG 302
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 294 VRFSRLG 300
>sp|VL2_HPV70|MINOR capsid protein L2|Human papillomavirus type 70
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 294 VRFSRLG 300
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 294 VRFSRLG 300
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 297 VRFSRLG 303
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 294 VRFSRLG 300
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 294 VRFSRLG 300
>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 294 VRFSRLG 300
>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 299 VRFSRLG 305
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 296 VRFSRLG 302
>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 294 VRFSRLG 300
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 298 VRFSRLG 304
>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 298 VRFSRLG 304
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 1 LIRFGRLG 8
++RF R+G
Sbjct: 297 IVRFSRVG 304
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 1 LIRFGRLG 8
+IRF R+G
Sbjct: 296 VIRFSRVG 303
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 2 IRFGRLGPA 10
+R+G L PA
Sbjct: 268 LRYGDLAPA 276
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RFGRLGP 9
RF LGP
Sbjct: 363 RFATLGP 369
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RFGRLGP 9
RF LGP
Sbjct: 362 RFATLGP 368
>sp|VP2_NVN68|MINOR capsid protein VP2|Norovirus (strain Human/NoV/United
Query: 3 RFGRLGP 9
RFG L P
Sbjct: 163 RFGNLSP 169
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 5 GRLGP 9
GRLGP
Sbjct: 782 GRLGP 786
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 292 VRFSRLG 298
>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 4 FGRLGP 9
FGR GP
Sbjct: 274 FGRRGP 279
>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b
Query: 1 LIRFGRLG 8
L+R+ R+G
Sbjct: 293 LVRYSRIG 300
>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a
Query: 1 LIRFGRLG 8
L+R+ R+G
Sbjct: 293 LVRYSRIG 300
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 296 VRFSRLG 302
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 295 VRFSRLG 301
>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 4 FGRLGP 9
FGR GP
Sbjct: 275 FGRRGP 280
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 2 IRFGRLG 8
+RF RLG
Sbjct: 297 VRFSRLG 303
>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7
Query: 1 LIRFGRLG 8
++RF R+G
Sbjct: 296 VVRFSRVG 303
3|SequenceR|20|11|SSRLGLIRFG
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 SSRLGLIRF 9
+SR GL+RF
Sbjct: 290 TSRRGLVRF 298
>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11
Query: 1 SSRLGLIRF 9
+SR GL+RF
Sbjct: 287 TSRRGLVRF 295
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 1 SSRLGLIRF 9
+SR G+IRF
Sbjct: 291 TSRRGVIRF 299
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 1 SSRLGLIRF 9
+SR G++RF
Sbjct: 292 TSRRGIVRF 300
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 1 SSRLGLIRF 9
SSR G +RF
Sbjct: 288 SSRRGTVRF 296
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 1 SSRLGL 6
SSRLGL
Sbjct: 145 SSRLGL 150
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 3 RLGLIR 8
RLGLIR
Sbjct: 793 RLGLIR 798
>sp|VPR_HV1MN|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 2 SRLGLIR 8
SR+G+IR
Sbjct: 79 SRIGIIR 85
4|SequenceR|25|16|VAPGVSSRLG
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 VAPGVSSRL 9
V+P V SRL
Sbjct: 817 VSPSVPSRL 825
5|SequenceR|30|21|VGRAQVAPGV
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 VGRAQVAPG 9
VGRA+V+PG
Sbjct: 3258 VGRARVSPG 3266
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 VGRAQVAPG 9
VGRA+V+PG
Sbjct: 3263 VGRARVSPG 3271
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 VGRAQVAPG 9
+GRA+V+PG
Sbjct: 3238 IGRARVSPG 3246
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 VGRAQVAPG 9
VGRA+++PG
Sbjct: 3268 VGRARISPG 3276
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 VGRAQVAPG 9
VGRA+++PG
Sbjct: 3268 VGRARISPG 3276
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 VGRAQVAPG 9
+GRA+V+PG
Sbjct: 3260 IGRARVSPG 3268
Query: 1 VGRAQVAPGV 10
+GR+ + PGV
Sbjct: 1510 MGRSDMKPGV 1519
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 VGRAQVAPG 9
+GRA+V+PG
Sbjct: 3257 IGRARVSPG 3265
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 VGRAQVAPG 9
+GRA+V+PG
Sbjct: 3257 IGRARVSPG 3265
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 VGRAQVAPG 9
+GRA+V+PG
Sbjct: 3269 IGRARVSPG 3277
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 VGRAQVAPG 9
+GRA+V+PG
Sbjct: 3253 IGRARVSPG 3261
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 VGRAQVAPG 9
VGRA+V+PG
Sbjct: 3245 VGRARVSPG 3253
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 VGRAQVAPG 9
VGRA+V+PG
Sbjct: 3248 VGRARVSPG 3256
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 VGRAQVAPG 9
VGRA+V+PG
Sbjct: 3247 VGRARVSPG 3255
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 VGRAQVAPG 9
VGRA+V+PG
Sbjct: 3247 VGRARVSPG 3255
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 VGRAQVAPG 9
VGRA+V+PG
Sbjct: 3247 VGRARVSPG 3255
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 VGRAQVAPG 9
VGRA+V+PG
Sbjct: 3247 VGRARVSPG 3255
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 VGRAQVAPG 9
VGRA+V+PG
Sbjct: 3249 VGRARVSPG 3257
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 VGRAQVAPG 9
VGRA+V+PG
Sbjct: 3249 VGRARVSPG 3257
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 VGRAQVAPG 9
+GRA+++PG
Sbjct: 3264 IGRARISPG 3272
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 VGRAQVAPG 9
+GRA+++PG
Sbjct: 3227 IGRARISPG 3235
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 VGRAQVAPG 9
+GRA+++PG
Sbjct: 3265 IGRARISPG 3273
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 VGRAQVAPG 9
+GRA+++PG
Sbjct: 3269 IGRARISPG 3277
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 VGRAQVAPG 9
VGRA+++PG
Sbjct: 3247 VGRARISPG 3255
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 VGRAQVAPG 9
VGRA+++PG
Sbjct: 3247 VGRARISPG 3255
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 VGRAQVAPG 9
+GRA+++PG
Sbjct: 3267 IGRARISPG 3275
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 VGRAQVAPG 9
+GRA+++PG
Sbjct: 3267 IGRARISPG 3275
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 VGRAQVAPG 9
+GRA+++PG
Sbjct: 3267 IGRARISPG 3275
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 VGRAQVAPG 9
+GRA+++PG
Sbjct: 3260 IGRARLSPG 3268
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VGRAQVAPG 9
+GR +V+PG
Sbjct: 3245 IGRGRVSPG 3253
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 VGRAQVAPG 9
+GR +V+PG
Sbjct: 3245 IGRGRVSPG 3253
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 VGRAQVAPG 9
+GR +V+PG
Sbjct: 3245 IGRGRVSPG 3253
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 VGRAQVAPG 9
+GR +V+PG
Sbjct: 3245 IGRGRVSPG 3253
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 VGRAQVAPG 9
+GR +V+PG
Sbjct: 3245 IGRGRVSPG 3253
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VGRAQVAPG 9
+GR +V+PG
Sbjct: 3245 IGRGRVSPG 3253
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 VGRAQVAPG 9
+GR +V+PG
Sbjct: 3246 IGRGRVSPG 3254
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 VGRAQVAPG 9
+GR +V+PG
Sbjct: 3246 IGRGRVSPG 3254
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 VGRAQVAPG 9
+GR +V+PG
Sbjct: 3246 IGRGRVSPG 3254
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 4 AQVAPG 9
AQVAPG
Sbjct: 175 AQVAPG 180
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 4 AQVAPG 9
AQVAPG
Sbjct: 175 AQVAPG 180
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 4 AQVAPG 9
AQVAPG
Sbjct: 175 AQVAPG 180
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 1 VGRAQVAPG 9
VGR + PG
Sbjct: 451 VGRRHIIPG 459
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VGRAQVAPG 9
VGR + PG
Sbjct: 451 VGRRHIIPG 459
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 4 AQVAPGV 10
AQ+ PG+
Sbjct: 294 AQITPGI 300
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VGRAQVAPGV 10
GR ++APG+
Sbjct: 263 TGRGRLAPGL 272
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VGRAQVAPGV 10
GR ++APG+
Sbjct: 263 TGRGRLAPGL 272
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VGRAQVAPGV 10
GR ++APG+
Sbjct: 263 TGRGRLAPGL 272
6|SequenceR|35|26|AVSQHVGRAQ
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 AVSQHVG 7
AVSQH G
Sbjct: 769 AVSQHAG 775
>sp|REV_HV1S1|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 2 VSQHVGRA 9
+S H+GR+
Sbjct: 60 ISTHLGRS 67
>sp|TAT_HV1MV|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 4 QHVGRAQ 10
QH GR Q
Sbjct: 71 QHTGRKQ 77
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 4 QHVGRA 9
+HVGRA
Sbjct: 146 RHVGRA 151
7|SequenceR|40|31|SPGDTAVSQH
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPGDTAV 7
+PGD+A+
Sbjct: 448 TPGDSAI 454
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 4 DTAVSQH 10
DT VS+H
Sbjct: 54 DTVVSEH 60
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 SPGDTA 6
SPGDT+
Sbjct: 695 SPGDTS 700
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 DTAVSQH 10
DT VS+H
Sbjct: 701 DTCVSEH 707
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 4 DTAVSQH 10
DT VS+H
Sbjct: 701 DTCVSEH 707
8|SequenceR|45|36|APQTSSPGDT
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 PQTSSPGD 9
PQ S PGD
Sbjct: 907 PQVSIPGD 914
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 PQTSSPGD 9
PQ S PGD
Sbjct: 907 PQVSIPGD 914
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 APQTSSPG 8
APQ SSPG
Sbjct: 546 APQLSSPG 553
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 2 PQTSSPG 8
PQ++SPG
Sbjct: 607 PQSTSPG 613
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 2 PQTSSPGD 9
P+TS+PG+
Sbjct: 255 PRTSTPGE 262
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 TSSPGDT 10
T+SPG+T
Sbjct: 2000 TTSPGET 2006
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 APQTSSPGDT 10
AP+T GDT
Sbjct: 1512 APRTYPKGDT 1521
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 1 APQTSSPGDT 10
AP T + GDT
Sbjct: 8 APTTRARGDT 17
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 APQTSSPGDT 10
AP T SP DT
Sbjct: 550 APPTVSPSDT 559
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 APQTSSPGDT 10
AP T SP DT
Sbjct: 550 APPTVSPSDT 559
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 3 QTSSPGDT 10
Q +SPG+T
Sbjct: 163 QMASPGET 170
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 3 QTSSPGD 9
Q +SPGD
Sbjct: 205 QNASPGD 211
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 3 QTSSPGD 9
Q S+PGD
Sbjct: 669 QESAPGD 675
>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)
Query: 2 PQTSSPGDT 10
P T PGD
Sbjct: 7 PYTGHPGDA 15
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 3 QTSSPGD 9
Q S+PGD
Sbjct: 660 QESAPGD 666
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 3 QTSSPGD 9
Q S+PGD
Sbjct: 669 QESAPGD 675
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 3 QTSSPGD 9
Q S+PGD
Sbjct: 669 QESAPGD 675
9|SequenceR|50|41|RAKPLAPQTS
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 RAKPLAPQTS 10
RA+ L P+T+
Sbjct: 1874 RARSLKPETT 1883
>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PLAPQTS 10
PL P TS
Sbjct: 309 PLCPHTS 315
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 4 PLAPQTS 10
PL P TS
Sbjct: 309 PLCPHTS 315
>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 AKPLAPQT 9
++PLAP+T
Sbjct: 196 SQPLAPRT 203
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 RAKPLAPQ 8
RA+P+ PQ
Sbjct: 256 RAEPIDPQ 263
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 3 KPLAPQ 8
KPL PQ
Sbjct: 40 KPLIPQ 45
>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54
Query: 2 AKPLAPQT 9
A+P+ PQT
Sbjct: 427 ARPIFPQT 434
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 2 AKPLAPQT 9
+PLAP T
Sbjct: 440 GQPLAPNT 447
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 2 AKPLAPQT 9
+PLAP T
Sbjct: 441 GQPLAPNT 448
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 3 KPLAPQTS 10
KP+ PQ S
Sbjct: 813 KPIKPQKS 820
>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 KPLAPQT 9
+PL PQT
Sbjct: 126 RPLGPQT 132
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 KPLAPQTS 10
KP P+TS
Sbjct: 121 KPTQPETS 128
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 2 AKPLAPQTS 10
KP+ PQ S
Sbjct: 812 VKPIKPQKS 820
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 4 PLAPQTS 10
PL PQ+S
Sbjct: 2114 PLGPQSS 2120
10|SequenceR|55|46|KPAVARAKPL
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 KPAVARAKP 9
KP ARA P
Sbjct: 5726 KPVRARAPP 5734
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 KPAVARAKPL 10
K VAR PL
Sbjct: 18 KRGVARVNPL 27
11|SequenceR|60|51|GRSSPKPAVA
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 GRSSPKP 7
G+S PKP
Sbjct: 460 GKSCPKP 466
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GRSSPKPAV 9
G SSP P V
Sbjct: 2639 GESSPNPTV 2647
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GRSSPKPAV 9
G SSP P V
Sbjct: 2636 GESSPNPTV 2644
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GRSSPKPAV 9
G SSP P V
Sbjct: 2639 GESSPNPTV 2647
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GRSSPKPAV 9
G SSP P V
Sbjct: 2639 GESSPNPTV 2647
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GRSSPKPAV 9
G SSP P V
Sbjct: 2639 GESSPNPTV 2647
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GRSSPKPAV 9
G SSP P V
Sbjct: 2638 GESSPSPTV 2646
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GRSSPKPAV 9
G SSP P V
Sbjct: 2638 GESSPSPTV 2646
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 GRSSPKPAV 9
G SSP P V
Sbjct: 2639 GESSPSPTV 2647
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GRSSPKPAV 9
G SSP P V
Sbjct: 2638 GESSPSPTV 2646
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GRSSPKPAV 9
G SSP P V
Sbjct: 2638 GESSPSPTV 2646
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GRSSPKPAV 9
G SSP P V
Sbjct: 2638 GESSPSPTV 2646
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 GRSSPKPAV 9
G SSP P V
Sbjct: 2669 GESSPSPGV 2677
Query: 1 GRSSPKPAV 9
GRS KP V
Sbjct: 1511 GRSDMKPGV 1519
>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)
Query: 4 SPKPAV 9
+PKPAV
Sbjct: 87 TPKPAV 92
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 1 GRSSPKPAV 9
G +SPKP++
Sbjct: 480 GAASPKPSI 488
>sp|PG034_VAR67|PROTEIN OPG034|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 PKPAV 9
PKPAV
Sbjct: 88 PKPAV 92
>sp|PG034_VACCC|PROTEIN OPG034|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 PKPAV 9
PKPAV
Sbjct: 98 PKPAV 102
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GRSSPKPAV 9
G +SPKP++
Sbjct: 480 GAASPKPSI 488
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 GRSSPKPAV 9
G + PKPA+
Sbjct: 72 GVTGPKPAI 80
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 GRSSPKPA 8
GR++P+P
Sbjct: 58 GRTTPEPT 65
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 1 GRSSPKP 7
GRS+ KP
Sbjct: 81 GRSTAKP 87
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 1 GRSSPKPAV 9
G + PKPA+
Sbjct: 73 GVTGPKPAI 81
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 GRSSPKPAV 9
G + PKPA+
Sbjct: 73 GVTGPKPAI 81
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 GRSSPKP 7
GRS+ KP
Sbjct: 81 GRSTAKP 87
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 3 SSPKPAV 9
+SPKP+V
Sbjct: 467 ASPKPSV 473
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 1 GRSSPKP 7
GRS+ KP
Sbjct: 81 GRSTAKP 87
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 GRSSPKP 7
GRS+ KP
Sbjct: 81 GRSTAKP 87
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 RSSPKPAVA 10
+S P PA+A
Sbjct: 1429 QSPPPPAIA 1437
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 1 GRSSPKPAV 9
G + PKPA+
Sbjct: 73 GVTGPKPAI 81
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 1 GRSSPKP 7
GRS+ KP
Sbjct: 81 GRSTAKP 87
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 1 GRSSPKPAV 9
G + PKPA+
Sbjct: 73 GVTGPKPAI 81
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 GRSSPKP 7
GRS+ KP
Sbjct: 81 GRSTAKP 87
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 1 GRSSPKPAV 9
G + PKPA+
Sbjct: 74 GVTGPKPAI 82
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 1 GRSSPKPAV 9
G + PKPA+
Sbjct: 75 GVTGPKPAI 83
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 1 GRSSPKPAV 9
G + PKPA+
Sbjct: 73 GVTGPKPAI 81
12|SequenceR|65|56|AVVYEGRSSP
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 1 AVVYEGRSS 9
AV+Y GR S
Sbjct: 729 AVIYSGRES 737
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 AVVYEGRSS 9
AV+Y GR S
Sbjct: 729 AVIYSGRES 737
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 3 VYEGRSS 9
+YEGR+S
Sbjct: 66 IYEGRNS 72
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VYEGRSS 9
+YEGR+S
Sbjct: 66 IYEGRNS 72
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 VVYEGRSSP 10
V YEG SP
Sbjct: 504 VQYEGDGSP 512
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 VVYEGRSSP 10
V YEG SP
Sbjct: 373 VQYEGDGSP 381
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 VVYEGRSSP 10
V YEG SP
Sbjct: 324 VQYEGDGSP 332
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 VVYEGRSSP 10
V YEG SP
Sbjct: 324 VQYEGDGSP 332
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 VVYEGRSSP 10
V YEG SP
Sbjct: 604 VQYEGDGSP 612
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 AVVYEGRSS 9
A Y+GRSS
Sbjct: 150 ACPYQGRSS 158
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 1 AVVYEGRSS 9
A Y+GRSS
Sbjct: 146 ACPYQGRSS 154
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 VVYEGRSSP 10
V YEG SP
Sbjct: 604 VQYEGDGSP 612
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 VVYEGRSSP 10
V YEG SP
Sbjct: 604 VQYEGDGSP 612
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 VVYEGRSSP 10
V YEG SP
Sbjct: 604 VQYEGDGSP 612
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 VVYEGRSSP 10
V YEG SP
Sbjct: 604 VQYEGDGSP 612
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 VVYEGRSSP 10
V YEG SP
Sbjct: 604 VQYEGDGSP 612
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 VVYEGRSSP 10
V YEG SP
Sbjct: 604 VQYEGDGSP 612
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 VVYEGRSSP 10
V YEG SP
Sbjct: 604 VQYEGDGSP 612
>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41
Query: 2 VVYEGRSSP 10
V + GRSSP
Sbjct: 115 VRFRGRSSP 123
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 VVYEGRSSP 10
V YEG SP
Sbjct: 324 VQYEGDGSP 332
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 AVVYEGRSS 9
A Y GRSS
Sbjct: 150 ACPYHGRSS 158
>sp|UL107_HCMVA|UNCHARACTERIZED protein UL107|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VVYEGRSSP 10
V Y+ R+SP
Sbjct: 8 VTYDHRTSP 16
13|SequenceR|70|61|LDDLKAVVYE
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DDLKAVVYE 10
DDL+ VYE
Sbjct: 107 DDLRDCVYE 115
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 1 LDDLKAVVYE 10
L+DL+A VY+
Sbjct: 48 LNDLRAYVYQ 57
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 2 DDLKAVVYE 10
DDL+ +YE
Sbjct: 107 DDLRDCIYE 115
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 LDDLKAVVY 9
LD+LK V Y
Sbjct: 2050 LDELKMVAY 2058
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 DLKAVVYE 10
DLK ++Y+
Sbjct: 212 DLKEIIYD 219
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 2 DDLKAVVYE 10
D+L +VYE
Sbjct: 320 DELNLLVYE 328
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 2 DDLKAVVYE 10
D+L +VYE
Sbjct: 320 DELNLLVYE 328
>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 LDDLKAVVYE 10
L DL+ VY+
Sbjct: 48 LSDLRGYVYQ 57
>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 LDDLKAVVYE 10
L DL+ VY+
Sbjct: 48 LSDLRGYVYQ 57
>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 LDDLKAVVYE 10
L DL+ VY+
Sbjct: 48 LSDLRGYVYQ 57
>sp|NCAP_VSIVC|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 LDDLKAVVYE 10
L DL+ VY+
Sbjct: 48 LSDLRGYVYQ 57
>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 LDDLKAVVYE 10
L DL+ VY+
Sbjct: 48 LSDLRGYVYQ 57
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 DLKAVVYE 10
DLK ++YE
Sbjct: 163 DLKQLLYE 170
14|SequenceR|75|66|RAWNVLDDLK
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 RAWNVLDDLK 10
R WN LDD++
Sbjct: 1590 RKWNGLDDVQ 1599
>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 AWNVLDDL 9
AWN+L +L
Sbjct: 325 AWNILKEL 332
>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 AWNVLDDL 9
AWN+L +L
Sbjct: 325 AWNILKEL 332
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 2 AWNVLDDLK 10
AW +L+D++
Sbjct: 32 AWGMLNDMQ 40
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 RAWNVLDDLK 10
R WN DD++
Sbjct: 1591 RKWNGTDDVQ 1600
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 RAWNVLDDLK 10
R WN DD++
Sbjct: 1591 RKWNGTDDVQ 1600
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 RAWNVLDDLK 10
R WN DD++
Sbjct: 1591 RKWNGTDDVQ 1600
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 RAWNVLDDLK 10
R WN DD++
Sbjct: 1591 RKWNGTDDVQ 1600
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 WNVLDDL 9
+NVLDD+
Sbjct: 307 YNVLDDI 313
>sp|PG144_VARV|VIRION membrane protein OPG144 precursor|Variola virus
Query: 1 RAWNVLDDL 9
R +N+LDD
Sbjct: 5 RYYNMLDDF 13
>sp|PG144_VAR67|VIRION membrane protein OPG144 precursor|Variola virus (isolate
Query: 1 RAWNVLDDL 9
R +N+LDD
Sbjct: 5 RYYNMLDDF 13
>sp|PG144_VACCC|VIRION membrane protein OPG144 precursor|Vaccinia virus (strain
Query: 1 RAWNVLDDL 9
R +N+LDD
Sbjct: 5 RYYNMLDDF 13
>sp|PG144_MONPV|VIRION membrane protein OPG144 precursor|Monkeypox virus (MPXV)
Query: 1 RAWNVLDDL 9
R +N+LDD
Sbjct: 5 RYYNMLDDF 13
>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)
Query: 3 WNVLDDL 9
WN+ +DL
Sbjct: 248 WNITNDL 254
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 WNVLDDL 9
W V+DD+
Sbjct: 873 WYVVDDI 879
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 WNVLDDL 9
W V+DD+
Sbjct: 873 WYVVDDI 879
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 RAWNVLDDLK 10
+ WN +DD++
Sbjct: 1590 QKWNGVDDVQ 1599
>sp|MATRX_CHAV|MATRIX protein|Chandipura virus (strain I653514) (CHPV)
Query: 1 RAWNVLDD 8
R WN+L +
Sbjct: 163 REWNILTN 170
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 3 WNVLDD 8
WN +DD
Sbjct: 529 WNYIDD 534
>sp|E1BS_ADE07|E1B protein, small T-antigen|Human adenovirus B serotype 7
Query: 3 WNVLDDLK 10
W +L+DL+
Sbjct: 4 WAILEDLR 11
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 4 NVLDDLK 10
NV+DD++
Sbjct: 866 NVIDDVR 872
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 4 NVLDDLK 10
NV+DD++
Sbjct: 866 NVIDDVR 872
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 4 NVLDDLK 10
NV+DD++
Sbjct: 866 NVIDDVR 872
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 NVLDDLK 10
NV+DD++
Sbjct: 866 NVIDDVR 872
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 NVLDDLK 10
NV+DD++
Sbjct: 866 NVIDDVR 872
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 5 VLDDLK 10
+LDDLK
Sbjct: 1689 ILDDLK 1694
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 5 VLDDLK 10
+LDDLK
Sbjct: 1689 ILDDLK 1694
15|SequenceR|80|71|WLSSRRAWNV
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 WLSSRRAW 8
WLSS+ +W
Sbjct: 929 WLSSQESW 936
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 124 WMSSEGAW 131
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 WLSSRRAW 8
WLSS +W
Sbjct: 929 WLSSHESW 936
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 WLSSRRAW 8
WLSS +W
Sbjct: 929 WLSSHESW 936
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 WLSSRRAW 8
WLSS +W
Sbjct: 929 WLSSHESW 936
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 WLSSRRA 7
W+S RRA
Sbjct: 780 WVSQRRA 786
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 WLSSRRA 7
W+S RRA
Sbjct: 780 WVSQRRA 786
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 WLSSRRAW 8
W S+ R W
Sbjct: 140 WTSTSRGW 147
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 1 WLSSRRAW 8
WLSS +W
Sbjct: 930 WLSSNESW 937
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 224 WMSSEGAW 231
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 224 WMSSEGAW 231
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 223 WMSSEGAW 230
Query: 3 SSRRAWN 9
+ RRAWN
Sbjct: 919 NERRAWN 925
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 223 WMSSEGAW 230
Query: 3 SSRRAWN 9
+ RRAWN
Sbjct: 919 NERRAWN 925
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 223 WMSSEGAW 230
Query: 3 SSRRAWN 9
+ RRAWN
Sbjct: 919 NERRAWN 925
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 223 WMSSEGAW 230
Query: 3 SSRRAWN 9
+ RRAWN
Sbjct: 919 NERRAWN 925
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 223 WMSSEGAW 230
Query: 3 SSRRAWN 9
+ RRAWN
Sbjct: 919 NERRAWN 925
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 224 WMSSEGAW 231
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 224 WMSSEGAW 231
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 224 WMSSEGAW 231
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 224 WMSSEGAW 231
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 224 WMSSEGAW 231
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 224 WMSSEGAW 231
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 224 WMSSEGAW 231
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 224 WMSSDGAW 231
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 SSRRAWN 9
+ RRAWN
Sbjct: 931 TERRAWN 937
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 SSRRAWN 9
+S+RAWN
Sbjct: 938 NSKRAWN 944
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 224 WMSSEGAW 231
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 224 WMSSEGAW 231
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WLSSRRAW 8
W+SS AW
Sbjct: 224 WMSSEGAW 231
>sp|U24_HHV6Z|U24 protein|Human herpesvirus 6B (strain Z29)
Query: 3 SSRRAWNV 10
SSR AWN+
Sbjct: 43 SSRSAWNL 50
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 WLSSRRA 7
W S RRA
Sbjct: 250 WYSCRRA 256
Query: 1 WLSSRRA 7
WL+ R+A
Sbjct: 650 WLAKRKA 656
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 WLSSRRA 7
W S RRA
Sbjct: 250 WYSCRRA 256
Query: 1 WLSSRRA 7
WL+ R+A
Sbjct: 650 WLAKRKA 656
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 WLSSRRA 7
W S RRA
Sbjct: 250 WYSCRRA 256
Query: 1 WLSSRRA 7
WL+ R+A
Sbjct: 650 WLAKRKA 656
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 5 RRAWN 9
RRAWN
Sbjct: 941 RRAWN 945
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 4 SRRAWNV 10
SR+AW V
Sbjct: 378 SRKAWPV 384
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 WLSSRRAW 8
WLSS+ +W
Sbjct: 929 WLSSQESW 936
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 4 SRRAWNV 10
SR+AW V
Sbjct: 377 SRKAWPV 383
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 5 RRAWN 9
RRAWN
Sbjct: 935 RRAWN 939
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 5 RRAWN 9
RRAWN
Sbjct: 941 RRAWN 945
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 WLSSRRAW 8
WL S +W
Sbjct: 929 WLGSHESW 936
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 WLSSRRAW 8
WL S +W
Sbjct: 929 WLGSHESW 936
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 WLSSRRAW 8
WLSS +W
Sbjct: 929 WLSSHESW 936
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 WLSSRRAW 8
WLSS +W
Sbjct: 929 WLSSHESW 936
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WLSSRRAW 8
W+S+ AW
Sbjct: 224 WMSAEGAW 231
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WLSSRRAW 8
W+S+ AW
Sbjct: 224 WMSAEGAW 231
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WLSSRRAW 8
W+S+ AW
Sbjct: 224 WMSAEGAW 231
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WLSSRRAW 8
W+S+ AW
Sbjct: 224 WMSAEGAW 231
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WLSSRRAW 8
W+S+ AW
Sbjct: 224 WMSAEGAW 231
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LSSRRAWNV 10
LSS R+W +
Sbjct: 170 LSSCRSWRM 178
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LSSRRAWNV 10
LSS R+W +
Sbjct: 170 LSSCRSWRM 178
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 WLSSRRAW 8
W SS +W
Sbjct: 930 WTSSSESW 937
16|SequenceR|85|76|GFTMPWLSSR
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 GFTMPWLS 8
GFT WLS
Sbjct: 3679 GFTYVWLS 3686
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 GFTMPWLS 8
GFT WLS
Sbjct: 3729 GFTYVWLS 3736
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 GFTMPWLS 8
GFT WLS
Sbjct: 3679 GFTYVWLS 3686
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 GFTMPWLS 8
GFT WLS
Sbjct: 3729 GFTYVWLS 3736
>sp|VE7_HPV39|PROTEIN E7|Human papillomavirus 39
Query: 1 GFTMPWLSS 9
GF PW ++
Sbjct: 98 GFVCPWCAT 106
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 GFTMPWLSSR 10
GF + WL+ R
Sbjct: 1273 GFALAWLAIR 1282
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 GFTMPWLSSR 10
GF + WL+ R
Sbjct: 1277 GFALAWLAIR 1286
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 GFTMPWLSSR 10
GF + WL+ R
Sbjct: 1277 GFALAWLAIR 1286
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 PWLSSR 10
PWLSS+
Sbjct: 2657 PWLSSK 2662
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 PWLSSR 10
PWLSS+
Sbjct: 2657 PWLSSK 2662
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 PWLSSR 10
PWLSS+
Sbjct: 2657 PWLSSK 2662
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 PWLSSR 10
PWLSS+
Sbjct: 2657 PWLSSK 2662
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 PWLSSR 10
PWLSS+
Sbjct: 2657 PWLSSK 2662
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 MPWLSSR 10
M WLSSR
Sbjct: 259 MTWLSSR 265
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 MPWLSSR 10
M WLSSR
Sbjct: 259 MTWLSSR 265
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 GFTMPWLSS 9
G T PW+ S
Sbjct: 1257 GPTKPWVGS 1265
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 GFTMPWLSS 9
G T PW+ S
Sbjct: 1257 GPTKPWVGS 1265
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 GFTMPWLSS 9
G T PW+ S
Sbjct: 1257 GPTKPWVGS 1265
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 GFTMPWLS 8
G T WLS
Sbjct: 3699 GLTYVWLS 3706
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 GFTMPWLS 8
G T WLS
Sbjct: 3699 GLTYVWLS 3706
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 TMPWLS 8
T+PW S
Sbjct: 495 TIPWTS 500
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 TMPWLS 8
T+PW S
Sbjct: 495 TIPWTS 500
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 GFTMPWLSS 9
G T+P LSS
Sbjct: 1200 GVTLPDLSS 1208
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 TMPWLSS 9
T+PW SS
Sbjct: 606 TVPWNSS 612
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 TMPWLSS 9
T+PW SS
Sbjct: 604 TVPWNSS 610
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 TMPWLSS 9
T+PW SS
Sbjct: 614 TVPWNSS 620
17|SequenceR|90|81|ACCALGFTMP
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 ACCALGFTM 9
AC ALGF +
Sbjct: 120 ACLALGFKV 128
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 1 ACCALG 6
ACCALG
Sbjct: 191 ACCALG 196
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 1 ACCALG 6
ACCALG
Sbjct: 189 ACCALG 194
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 CCALGFTM 9
CC GF++
Sbjct: 261 CCNEGFSL 268
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CALGFTMP 10
C LG T P
Sbjct: 33 CGLGITPP 40
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 5 LGFTMP 10
+GFT+P
Sbjct: 127 IGFTLP 132
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 5 LGFTMP 10
+GFT+P
Sbjct: 84 IGFTLP 89
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 5 LGFTMP 10
+GF+MP
Sbjct: 77 MGFSMP 82
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 CALGFTMP 10
C+L TMP
Sbjct: 178 CSLTSTMP 185
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 5 LGFTMP 10
+GFT+P
Sbjct: 127 IGFTIP 132
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 5 LGFTMP 10
+GFT+P
Sbjct: 127 IGFTIP 132
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 5 LGFTMP 10
+GFT+P
Sbjct: 127 IGFTIP 132
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 5 LGFTMP 10
+GFT+P
Sbjct: 127 IGFTIP 132
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 5 LGFTMP 10
+GFT+P
Sbjct: 127 IGFTIP 132
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 3 CALGFTM 9
C +GF M
Sbjct: 759 CCMGFNM 765
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 CALGFTM 9
C LGF++
Sbjct: 192 CLLGFSL 198
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 CALGFTM 9
C LGF++
Sbjct: 192 CLLGFSL 198
>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9
Query: 3 CALGFTM 9
CA GFT+
Sbjct: 57 CAAGFTL 63
18|SequenceR|95|86|HMMEVACCAL
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 EVACCAL 10
E ACC L
Sbjct: 3228 EAACCHL 3234
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 EVACCAL 10
E ACC L
Sbjct: 3228 EAACCHL 3234
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 5 VACCAL 10
V CCAL
Sbjct: 398 VDCCAL 403
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 VACCAL 10
V CCAL
Sbjct: 398 VDCCAL 403
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 EVACCAL 10
E ACC L
Sbjct: 3205 EAACCHL 3211
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 EVACCAL 10
E ACC L
Sbjct: 3205 EAACCHL 3211
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 6 ACCAL 10
ACC+L
Sbjct: 1208 ACCSL 1212
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 6 ACCAL 10
ACC+L
Sbjct: 1208 ACCSL 1212
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 HMMEVAC 7
H++ VAC
Sbjct: 1164 HLLGVAC 1170
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 HMMEVAC 7
H M+ AC
Sbjct: 638 HRMQAAC 644
Query: 4 EVACCAL 10
+V CC++
Sbjct: 2413 DVVCCSM 2419
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 HMMEVACCAL 10
HM+ V C L
Sbjct: 3677 HMIGVTLCVL 3686
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 HMMEVACCAL 10
HM+ V C L
Sbjct: 3647 HMIGVTLCVL 3656
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 HMMEVACCAL 10
HM+ V C L
Sbjct: 3677 HMIGVTLCVL 3686
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 MMEVACCAL 10
M+ + CC L
Sbjct: 1 MVLILCCTL 9
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 HMMEVACCAL 10
HM+ V C L
Sbjct: 3627 HMIGVTLCVL 3636
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 HMMEVACCAL 10
HM+ V C L
Sbjct: 3647 HMIGVTLCVL 3656
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 HMMEVACCAL 10
HM+ V C L
Sbjct: 3627 HMIGVTLCVL 3636
19|SequenceR|100|91|RPAAMHMMEV
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PAAMHMME 9
PA++H ME
Sbjct: 168 PASLHGME 175
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 RPAAMHMMEV 10
RP+ +H M
Sbjct: 1311 RPSTLHQMNT 1320
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RPAAMHMMEV 10
+P A HM +V
Sbjct: 281 KPGAEHMRDV 290
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RPAAMHMMEV 10
+P A HM +V
Sbjct: 281 KPGAEHMRDV 290
20|SequenceR|105|96|RDMDYRPAAM
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2272 DIDLRPAS 2279
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2269 DIDLRPAS 2276
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2272 DIDLRPAS 2279
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2272 DIDLRPAS 2279
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2272 DIDLRPAS 2279
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2272 DIDLRPAS 2279
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2272 DIDLRPAS 2279
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RDMDYRP 7
RD+D RP
Sbjct: 478 RDLDQRP 484
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2273 DVDLRPAS 2280
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2268 DVDLRPAS 2275
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2268 DVDLRPAS 2275
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2268 DVDLRPAS 2275
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2268 DVDLRPAS 2275
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2268 DVDLRPAS 2275
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2300 DIDLRPAS 2307
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2300 DIDLRPAS 2307
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 DMDYRPAA 9
D+D RPA+
Sbjct: 2296 DIDLRPAS 2303
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 DMDYRPAAM 10
D+D RP A+
Sbjct: 1786 DIDSRPIAL 1794
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 RDMDYRPAA 9
RD+ YRP A
Sbjct: 662 RDIIYRPYA 670
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 MDYRPAA 9
+D+RP A
Sbjct: 2270 LDFRPGA 2276
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 5 YRPAA 9
YRPAA
Sbjct: 348 YRPAA 352
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 1 RDMDYRPAA 9
RD RPAA
Sbjct: 86 RDQSQRPAA 94
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RDMDYRPAAM 10
+ MDY P A+
Sbjct: 425 KQMDYPPPAI 434
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 RDMDYRP 7
+D DY+P
Sbjct: 686 QDKDYKP 692
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 RDMDYRP 7
+D DY+P
Sbjct: 686 QDKDYKP 692
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 MDYRPAAM 10
+DYRP +
Sbjct: 1594 VDYRPIGL 1601
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 MDYRPAAM 10
+DYRP +
Sbjct: 1594 VDYRPIGL 1601
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 RDMDYRPAA 9
RD RPAA
Sbjct: 88 RDQAQRPAA 96
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 2 DMDYRPAAM 10
D+D +P+A+
Sbjct: 333 DLDSKPSAI 341
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 RDMDYRPAA 9
RD RPAA
Sbjct: 88 RDQAQRPAA 96
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 RDMDYRPAA 9
RD RPAA
Sbjct: 88 RDQAQRPAA 96
21|SequenceR|110|101|FVVGFRDMDY
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 FVVGFRDMDY 10
F+V RDM+Y
Sbjct: 118 FIVKTRDMEY 127
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 FVVGFRDMDY 10
F+V RDM+Y
Sbjct: 118 FIVKTRDMEY 127
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 1 FVVGFRDMDY 10
F+V RDM+Y
Sbjct: 118 FIVKTRDMEY 127
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 4 GFRDMDY 10
GFRDM Y
Sbjct: 428 GFRDMSY 434
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 4 GFRDMDY 10
GFRDM Y
Sbjct: 428 GFRDMSY 434
22|SequenceR|115|106|RPSARFVVGF
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 RPSARFVVGF 10
RP+++F+ F
Sbjct: 29 RPTSKFISHF 38
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 2 PSARFVVG 9
PS R VVG
Sbjct: 469 PSGRAVVG 476
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 2 PSARFVVG 9
PS R VVG
Sbjct: 469 PSGRAVVG 476
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 RPSARFVVGF 10
+PS F++G+
Sbjct: 60 QPSPHFLIGY 69
>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RPSARFVVG 9
+P ARF+ G
Sbjct: 6 QPGARFIHG 14
>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RPSARFVVG 9
+P ARF+ G
Sbjct: 6 QPGARFIHG 14
>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RPSARFVVG 9
+P ARF+ G
Sbjct: 6 QPGARFIHG 14
23|SequenceR|120|111|MVDSQRPSAR
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 MVDSQRPSA 9
M DS PSA
Sbjct: 372 MADSTTPSA 380
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 MVDSQRPSAR 10
+VD RPS R
Sbjct: 968 VVDPVRPSVR 977
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 4 SQRPSA 9
SQRPSA
Sbjct: 91 SQRPSA 96
>sp|PG029_VARV|IFN signaling evasion protein OPG029|Variola virus
Query: 1 MVDSQRPS 8
M D RPS
Sbjct: 30 MTDEMRPS 37
>sp|PG029_VAR67|IFN signaling evasion protein OPG029|Variola virus (isolate
Query: 1 MVDSQRPS 8
M D RPS
Sbjct: 30 MTDEMRPS 37
>sp|PG029_VACCC|IFN signaling evasion protein OPG029|Vaccinia virus (strain
Query: 1 MVDSQRPS 8
M D RPS
Sbjct: 30 MTDEMRPS 37
>sp|UL136_HCMVT|PROTEIN UL136|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 MVDSQRPS 8
MVD RP+
Sbjct: 160 MVDETRPA 167
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MVDSQRPS 8
MVD RP+
Sbjct: 160 MVDETRPA 167
24|SequenceR|125|116|TGAVIMVDSQ
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TGAVIMVDS 9
+GA+++VDS
Sbjct: 267 SGALMIVDS 275
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TGAVIMVDS 9
+GA+++VDS
Sbjct: 267 SGALMIVDS 275
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 TGAVIMVDS 9
+GA+++VDS
Sbjct: 267 SGALMIVDS 275
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 TGAVIMVDSQ 10
+G++I DSQ
Sbjct: 325 SGSIITSDSQ 334
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 TGAVIM 6
TGA+IM
Sbjct: 1372 TGAIIM 1377
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 TGAVIMVDSQ 10
TGA IMV+ +
Sbjct: 654 TGAKIMVEVE 663
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 2 GAVIMVDSQ 10
GA +++D+Q
Sbjct: 200 GAEVIIDTQ 208
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 369 TGGVFLVD 376
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 369 TGGVFLVD 376
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 369 TGGVFLVD 376
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 369 TGGVFLVD 376
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 369 TGGVFLVD 376
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 369 TGGVFLVD 376
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 359 TGGVFLVD 366
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 359 TGGVFLVD 366
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 359 TGGVFLVD 366
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 359 TGGVFLVD 366
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 359 TGGVFLVD 366
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 359 TGGVFLVD 366
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 359 TGGVFLVD 366
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 365 TGGVFLVD 372
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 370 TGGVFLVD 377
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 372 TGGVFLVD 379
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 372 TGGVFLVD 379
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 372 TGGVFLVD 379
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 365 TGGVFLVD 372
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 372 TGGVFLVD 379
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 372 TGGVFLVD 379
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 372 TGGVFLVD 379
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 TGAVIMVD 8
TG V +VD
Sbjct: 365 TGGVFLVD 372
25|SequenceR|130|121|MKNTLTGAVI
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 MKNTLTGA 8
+ N+LTGA
Sbjct: 1123 LDNSLTGA 1130
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 MKNTLTGA 8
+ N+LTGA
Sbjct: 1123 LDNSLTGA 1130
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 MKNTLTGAVI 10
M NT T A+I
Sbjct: 1310 MSNTSTRAII 1319
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 MKNTLTGAVI 10
M NT T A+I
Sbjct: 1310 MSNTSTRAII 1319
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 MKNTLTGAVI 10
M NT T A+I
Sbjct: 1310 MSNTSTRAII 1319
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 MKNTLTGAVI 10
M NT T A+I
Sbjct: 1310 MSNTSTRAII 1319
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 MKNTLTGAVI 10
M NT T A+I
Sbjct: 1310 MSNTSTRAII 1319
>sp|VP22_VZVO|TEGUMENT protein VP22|Varicella-zoster virus (strain Oka vaccine)
Query: 5 LTGAVI 10
LTGAVI
Sbjct: 216 LTGAVI 221
>sp|VP22_VZVD|TEGUMENT protein VP22|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 LTGAVI 10
LTGAVI
Sbjct: 216 LTGAVI 221
26|SequenceR|135|126|RLAPAMKNTL
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 2 LAPAMKNTL 10
LAP MK+ L
Sbjct: 116 LAPTMKDFL 124
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LAPAMKNTL 10
LAP MK+ L
Sbjct: 116 LAPTMKDFL 124
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 APAMKNTL 10
AP+++N+L
Sbjct: 25 APSLRNSL 32
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 APAMKNTL 10
AP+++N+L
Sbjct: 25 APSLRNSL 32
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 APAMKNTL 10
AP+++N+L
Sbjct: 25 APSLRNSL 32
>sp|PAX_I96A0|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 LAPAMKN 8
++PA+KN
Sbjct: 222 ISPALKN 228
27|SequenceR|140|131|QDYVKRLAPA
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 3 YVKRLAPA 10
+VKRL P
Sbjct: 170 FVKRLGPG 177
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 YVKRLAPA 10
+VKRL P
Sbjct: 170 FVKRLGPG 177
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 3 YVKRLAPA 10
+VKRL P
Sbjct: 170 FVKRLGPG 177
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 YVKRLAPA 10
+VKRL P
Sbjct: 170 FVKRLGPG 177
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 3 YVKRLAPA 10
+VKRL P
Sbjct: 170 FVKRLGPG 177
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 3 YVKRLAPA 10
+VKRL P
Sbjct: 170 FVKRLGPG 177
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 DYVKRLAP 9
D +KR+AP
Sbjct: 1554 DVMKRIAP 1561
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 QDYVKRL 7
+DY+KR+
Sbjct: 87 EDYLKRM 93
>sp|VP2_POVBA|MINOR capsid protein VP2|BK polyomavirus (strain AS) (BKPyV)
Query: 1 QDYVKRLAP 9
QDY L+P
Sbjct: 216 QDYYSNLSP 224
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 QDYVKR 6
+DY+KR
Sbjct: 423 KDYIKR 428
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 QDYVKR 6
+DY+KR
Sbjct: 423 KDYIKR 428
>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)
Query: 2 DYVKRLAP 9
DY RL+P
Sbjct: 217 DYYSRLSP 224
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 QDYVKRLAPA 10
+D +RLAP
Sbjct: 606 RDLTRRLAPG 615
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 VKRLAPA 10
VKR APA
Sbjct: 114 VKRSAPA 120
28|SequenceR|145|136|RPEPMQDYVK
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 RPEPMQDYV 9
RP P+Q Y+
Sbjct: 15 RPAPVQRYI 23
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 PMQDYVK 10
P+QDY++
Sbjct: 3440 PIQDYIQ 3446
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 PMQDYVK 10
P+QDY++
Sbjct: 3440 PIQDYIQ 3446
>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)
Query: 1 RPEPMQDYV 9
RP+P Q YV
Sbjct: 248 RPDPRQHYV 256
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RPEPMQ 6
RP+PM+
Sbjct: 880 RPQPME 885
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RPEPMQ 6
RP+PM+
Sbjct: 879 RPQPME 884
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RPEPMQ 6
RP+PM+
Sbjct: 880 RPQPME 885
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 PEPMQDY 8
P+P+ DY
Sbjct: 1409 PDPLADY 1415
>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)
Query: 1 RPEPMQDYV 9
RP+P Q YV
Sbjct: 208 RPDPRQHYV 216
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 1 RPEPM 5
RPEPM
Sbjct: 339 RPEPM 343
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 2 PEPMQDY 8
P P+Q+Y
Sbjct: 1935 PNPVQEY 1941
>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PEPMQDYV 9
PE DYV
Sbjct: 185 PEEFMDYV 192
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PEPMQDYV 9
PE DYV
Sbjct: 187 PEEFMDYV 194
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 293 EPFRDYV 299
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 293 EPFRDYV 299
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 287 EPFRDYV 293
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 287 EPFRDYV 293
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 292 EPFRDYV 298
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 294 EPFRDYV 300
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 293 EPFRDYV 299
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 288 EPFRDYV 294
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 287 EPFRDYV 293
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 290 EPFRDYV 296
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 287 EPFRDYV 293
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 288 EPFRDYV 294
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 289 EPFRDYV 295
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 287 EPFRDYV 293
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 293 EPFRDYV 299
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 287 EPFRDYV 293
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 287 EPFRDYV 293
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 293 EPFRDYV 299
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 287 EPFRDYV 293
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 289 EPFRDYV 295
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 287 EPFRDYV 293
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 289 EPFRDYV 295
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 293 EPFRDYV 299
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 293 EPFRDYV 299
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 297 EPFRDYV 303
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 290 EPFRDYV 296
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 287 EPFRDYV 293
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 287 EPFRDYV 293
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 290 EPFRDYV 296
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 290 EPFRDYV 296
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 290 EPFRDYV 296
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 287 EPFRDYV 293
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RPEPMQD 7
RP+PM +
Sbjct: 22 RPDPMME 28
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 PEPMQDYVK 10
P+P+ DY K
Sbjct: 189 PKPVVDYDK 197
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 2 PEPMQDY 8
PEP+Q +
Sbjct: 290 PEPIQTF 296
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PEPMQDYVK 10
PE ++DY++
Sbjct: 256 PETLRDYLE 264
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PEPMQDYVK 10
PE ++DY++
Sbjct: 256 PETLRDYLE 264
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 3 EPMQD 7
EPMQD
Sbjct: 319 EPMQD 323
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 3 EPMQD 7
EPMQD
Sbjct: 319 EPMQD 323
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 293 EPFQSYV 299
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 291 EPFQSYV 297
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 293 EPFQSYV 299
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 294 EPFQSYV 300
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 288 EPFQSYV 294
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 293 EPFQSYV 299
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 293 EPFQSYV 299
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 288 EPFQSYV 294
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 288 EPFQSYV 294
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 288 EPFQSYV 294
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 293 EPFQSYV 299
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 291 EPFQSYV 297
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 288 EPFQSYV 294
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 293 EPFQSYV 299
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 288 EPFQSYV 294
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 MQDYVK 10
M+DY+K
Sbjct: 407 MRDYIK 412
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 293 EPFQSYV 299
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 293 EPFQSYV 299
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 EPMQDYV 9
EP Q YV
Sbjct: 294 EPFQSYV 300
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 297 EPFRDYV 303
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 5 MQDYVK 10
M+DY+K
Sbjct: 407 MRDYIK 412
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 289 EPFRDYV 295
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 292 EPFRDYV 298
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPMQDYV 9
EP +DYV
Sbjct: 291 EPFRDYV 297
29|SequenceR|150|141|MSVVYRPEPM
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 YRPEPM 10
YRP+PM
Sbjct: 21 YRPDPM 26
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 5 YRPEPM 10
YRP+PM
Sbjct: 21 YRPDPM 26
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 YRPEPM 10
YRP+PM
Sbjct: 21 YRPDPM 26
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 5 YRPEPM 10
YRP+P+
Sbjct: 230 YRPQPL 235
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 5 YRPEPM 10
YRP+P+
Sbjct: 230 YRPQPL 235
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 2 SVVYRPEPM 10
++VY PEPM
Sbjct: 78 NIVYVPEPM 86
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 3 VVYRPEPM 10
+VY PEPM
Sbjct: 78 IVYVPEPM 85
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 3 VVYRPEPM 10
+VY PEPM
Sbjct: 78 IVYVPEPM 85
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 3 VVYRPEPM 10
+VY PEPM
Sbjct: 78 IVYVPEPM 85
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 2 SVVYRPEPM 10
++VY PEPM
Sbjct: 78 NIVYVPEPM 86
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 3 VVYRPEPM 10
+VY PEPM
Sbjct: 78 IVYVPEPM 85
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 3 VVYRPEPM 10
+VY PEPM
Sbjct: 78 IVYVPEPM 85
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 VVYRPEPM 10
VVY P+P+
Sbjct: 186 VVYEPKPI 193
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 3 VVYRPEPM 10
+VY PEPM
Sbjct: 78 IVYVPEPM 85
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 VVYRPEPM 10
VVY P+P+
Sbjct: 185 VVYEPKPV 192
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 VVYRPEPM 10
VVY P+P+
Sbjct: 185 VVYEPKPV 192
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 4 VYRPEPM 10
VY PEP+
Sbjct: 1408 VYDPEPL 1414
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 4 VYRPEPM 10
VY PEP+
Sbjct: 1408 VYDPEPL 1414
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 4 VYRPEPM 10
VY PEP+
Sbjct: 1408 VYDPEPL 1414
>sp|UL126_HCMVA|UNCHARACTERIZED protein UL126|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 VYRPEPM 10
VYRP P+
Sbjct: 107 VYRPTPL 113
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 4 VYRPEP 9
+Y+PEP
Sbjct: 186 IYQPEP 191
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 SVVYRPEPM 10
S Y PEP+
Sbjct: 1189 SSFYAPEPI 1197
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 SVVYRPEPM 10
+ VY P+P+
Sbjct: 1404 TFVYDPDPL 1412
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 5 YRPEP 9
Y+PEP
Sbjct: 80 YQPEP 84
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 3 VVYRPE 8
VVY+PE
Sbjct: 294 VVYKPE 299
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 5 YRPEP 9
Y+PEP
Sbjct: 179 YQPEP 183
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 2 SVVYRPEP 9
S VY P P
Sbjct: 288 SAVYSPTP 295
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 5 YRPEP 9
Y+PEP
Sbjct: 93 YQPEP 97
30|SequenceR|155|146|NACSGMSVVY
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NACSGMSVVY 10
N CS S+VY
Sbjct: 205 NDCSNASIVY 214
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NACSGMSVVY 10
N CS S+VY
Sbjct: 205 NDCSNASIVY 214
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 NACSGMSVVY 10
N CS S+VY
Sbjct: 205 NDCSNRSIVY 214
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 NACSGMSVVY 10
N CS S+VY
Sbjct: 205 NDCSNSSIVY 214
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NACSGMSVVY 10
N CS S+VY
Sbjct: 205 NDCSNSSIVY 214
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NACSGMSVVY 10
N CS S+VY
Sbjct: 205 NDCSNSSIVY 214
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NACSGMSVVY 10
N CS S+VY
Sbjct: 205 NDCSNSSIVY 214
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 NACSGMSVVY 10
N CS S+VY
Sbjct: 205 NDCSNSSIVY 214
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NACSGMSVVY 10
N CS S+VY
Sbjct: 205 NDCSNSSIVY 214
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NACSGMSVVY 10
N CS S+VY
Sbjct: 205 NDCSNSSIVY 214
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 NACSGMSVVY 10
N CS S+VY
Sbjct: 205 NDCSNGSIVY 214
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 NACSGM 6
NAC GM
Sbjct: 1121 NACKGM 1126
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 NACSGM 6
NAC GM
Sbjct: 1124 NACKGM 1129
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 NACSGM 6
NAC GM
Sbjct: 1121 NACKGM 1126
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 NACSGM 6
NAC GM
Sbjct: 1122 NACKGM 1127
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 NACSGMSVV 9
NAC GM +
Sbjct: 1119 NACKGMEWI 1127
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 NACSGM 6
NAC GM
Sbjct: 1113 NACKGM 1118
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 NACSGMSVV 9
NAC GM +
Sbjct: 1131 NACKGMEWI 1139
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 NACSGMSVV 9
NAC GM +
Sbjct: 1112 NACKGMEWI 1120
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 NACSGM 6
NAC GM
Sbjct: 1113 NACKGM 1118
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 NACSGMSVV 9
NAC GM +
Sbjct: 1115 NACKGMEWI 1123
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 NACSGM 6
NAC GM
Sbjct: 1113 NACKGM 1118
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 NACSGMSVV 9
NAC GM +
Sbjct: 1111 NACKGMEWI 1119
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 NACSGMSVV 9
NAC GM +
Sbjct: 1111 NACKGMEWI 1119
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 NACSGMSVV 9
NAC GM +
Sbjct: 1110 NACKGMEWI 1118
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 NACSGMSVV 9
NAC GM +
Sbjct: 1112 NACKGMEWI 1120
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 1 NACSGMSVVY 10
N CS S+VY
Sbjct: 205 NDCSNSSIVY 214
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 2 ACSGMSV 8
ACSG+S+
Sbjct: 130 ACSGVSL 136
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 ACSGMSVV 9
AC G SVV
Sbjct: 1057 ACPGTSVV 1064
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 ACSGMSVV 9
AC G SV+
Sbjct: 1057 ACPGTSVI 1064
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 ACSGMSVV 9
AC G SV+
Sbjct: 1057 ACPGTSVI 1064
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 ACSGMSVV 9
AC G SV+
Sbjct: 1057 ACPGTSVI 1064
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 ACSGMSVV 9
AC G SV+
Sbjct: 1057 ACPGTSVI 1064
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 ACSGMSVV 9
AC G SV+
Sbjct: 1057 ACPGTSVI 1064
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 ACSGMSVV 9
AC G SV+
Sbjct: 1057 ACPGTSVI 1064
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 NACSGMSVVY 10
N C SVVY
Sbjct: 205 NDCPNASVVY 214
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 NACSGMSVVY 10
N C SVVY
Sbjct: 205 NDCPNASVVY 214
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 SGMSVVY 10
SG++VVY
Sbjct: 1583 SGLNVVY 1589
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 NACSGMSVVY 10
N C SVVY
Sbjct: 205 NDCPNSSVVY 214
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 NACSGM 6
N+C GM
Sbjct: 1123 NSCKGM 1128
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 NACSGMSVVY 10
N C S+VY
Sbjct: 205 NDCPNSSIVY 214
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 NACSGMSVVY 10
N CS S+V+
Sbjct: 205 NDCSNNSIVF 214
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 NACSGMSVVY 10
N C S+VY
Sbjct: 205 NDCPNSSIVY 214
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 NACSGMSVVY 10
N C S+VY
Sbjct: 205 NDCPNSSIVY 214
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 NACSGMSVVY 10
N CS S+V+
Sbjct: 205 NDCSNSSIVW 214
>sp|B9_HHV6Z|PROTEIN B9|Human herpesvirus 6B (strain Z29)
Query: 1 NACSGMSV 8
+AC G+SV
Sbjct: 5 SACMGISV 12
Query: 1 NACSGMSV 8
+AC G+SV
Sbjct: 26 SACMGISV 33
Query: 1 NACSGMSV 8
+AC G+SV
Sbjct: 47 SACMGISV 54
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 NACSGMSVVY 10
N C S+VY
Sbjct: 205 NDCPNSSIVY 214
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 ACSGMSV 8
AC+G+SV
Sbjct: 2654 ACNGISV 2660
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 ACSGMSV 8
AC+G+SV
Sbjct: 2604 ACNGISV 2610
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 ACSGMSV 8
AC+G+SV
Sbjct: 2624 ACNGISV 2630
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NACSGMSVVY 10
N C S+VY
Sbjct: 205 NDCPNSSIVY 214
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 NACSGMSVVY 10
N C S+VY
Sbjct: 205 NDCPNSSIVY 214
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 ACSGMSV 8
AC+G+SV
Sbjct: 2604 ACNGISV 2610
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 ACSGMSV 8
AC+G+SV
Sbjct: 2624 ACNGISV 2630
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 ACSGMSV 8
AC+G+SV
Sbjct: 2654 ACNGISV 2660
31|SequenceR|160|151|YYGGGNACSG
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 4 GGNACSG 10
GGN CSG
Sbjct: 156 GGNVCSG 162
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 4 GGNACS 9
GGNACS
Sbjct: 806 GGNACS 811
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 3 GGGNACS 9
GGG AC+
Sbjct: 240 GGGGACA 246
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 YGGGNA 7
YGGG+A
Sbjct: 117 YGGGHA 122
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 3 GGGNAC 8
GGG++C
Sbjct: 305 GGGDSC 310
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 4 GGNACSG 10
GG CSG
Sbjct: 10 GGAGCSG 16
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 3 GGGNAC 8
GG NAC
Sbjct: 150 GGSNAC 155
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 3 GGGNAC 8
GGG++C
Sbjct: 303 GGGDSC 308
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 3 GGGNAC 8
GG NAC
Sbjct: 150 GGSNAC 155
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 3 GGGNAC 8
GG NAC
Sbjct: 134 GGSNAC 139
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 GGGNAC 8
GG NAC
Sbjct: 150 GGSNAC 155
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 3 GGGNAC 8
GG NAC
Sbjct: 150 GGSNAC 155
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 2 YGGGNA 7
Y GGNA
Sbjct: 616 YSGGNA 621
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 2 YGGGNA 7
Y GGNA
Sbjct: 616 YSGGNA 621
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 3 GGGNAC 8
GG NAC
Sbjct: 150 GGSNAC 155
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 3 GGGNAC 8
GG NAC
Sbjct: 134 GGSNAC 139
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 3 GGGNAC 8
GG NAC
Sbjct: 134 GGSNAC 139
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 3 GGGNAC 8
GG NAC
Sbjct: 1008 GGKNAC 1013
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 GGGNAC 8
GG NAC
Sbjct: 1008 GGKNAC 1013
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 3 GGGNAC 8
GG NAC
Sbjct: 150 GGSNAC 155
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 3 GGGNAC 8
GG NAC
Sbjct: 150 GGSNAC 155
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 3 GGGNAC 8
GG NAC
Sbjct: 150 GGSNAC 155
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 3 GGGNAC 8
GG NAC
Sbjct: 150 GGSNAC 155
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 3 GGGNAC 8
GG NAC
Sbjct: 1008 GGKNAC 1013
>sp|VE8E2_HPV58|PROTEIN E8^E2C|Human papillomavirus 58
Query: 2 YGGGNACS 9
Y G N CS
Sbjct: 81 YKGRNVCS 88
>sp|VE2_HPV58|REGULATORY protein E2|Human papillomavirus 58
Query: 2 YGGGNACS 9
Y G N CS
Sbjct: 268 YKGRNVCS 275
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 3 GGGNAC 8
GG NAC
Sbjct: 1008 GGKNAC 1013
>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 YYGGGNACSG 10
+ GG AC G
Sbjct: 215 FLGGAPACPG 224
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 YYGGGN 6
Y+G GN
Sbjct: 849 YFGSGN 854
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YYGGGN 6
Y+G GN
Sbjct: 1172 YFGSGN 1177
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 GGGNAC 8
GG NAC
Sbjct: 1008 GGKNAC 1013
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 YYGGGNA 7
+YGGG +
Sbjct: 1977 HYGGGTS 1983
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 YGGGNACS 9
Y GGN+C+
Sbjct: 561 YCGGNSCT 568
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YYGGGNA--CSG 10
+YGGG CS
Sbjct: 1439 HYGGGKGLDCSA 1450
>sp|HBSAG_HBVH1|LARGE envelope protein|Hepatitis B virus genotype H
Query: 1 YYGGGNACS 9
+Y G N CS
Sbjct: 373 WYWGPNLCS 381
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 YYGGGNA 7
+YGGG +
Sbjct: 1977 HYGGGTS 1983
>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H
Query: 1 YYGGGNACS 9
+Y G N CS
Sbjct: 373 WYWGPNLCS 381
>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H
Query: 1 YYGGGNACS 9
+Y G N CS
Sbjct: 373 WYWGPNLCS 381
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 YYGGGNA 7
Y GGG A
Sbjct: 1327 YAGGGQA 1333
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 YYGGGNA 7
Y GGG A
Sbjct: 1327 YAGGGQA 1333
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 YYGGGNA 7
Y GGG A
Sbjct: 1327 YAGGGQA 1333
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 YYGGGNA 7
Y GGG A
Sbjct: 1327 YAGGGQA 1333
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 YYGGGNA 7
Y GGG A
Sbjct: 1327 YAGGGQA 1333
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 3 GGGNACSG 10
G G+ C+G
Sbjct: 9 GDGSGCNG 16
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 YYGGGNAC 8
Y GG AC
Sbjct: 228 YETGGKAC 235
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 3 GGGNACSG 10
G G+ C+G
Sbjct: 9 GDGSGCNG 16
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 YYGGGNACSG 10
Y G +AC G
Sbjct: 2223 YLGISSACDG 2232
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YYGGG 5
+YGGG
Sbjct: 1440 HYGGG 1444
>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 1 YYGGGNACSG 10
+ GG AC G
Sbjct: 215 FLGGTPACPG 224
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 YYGGGNACSG 10
Y G +AC G
Sbjct: 2223 YLGISSACDG 2232
32|SequenceR|165|156|SYSYHYYGGG
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 1 SYSYHYYGGG 10
SY+Y Y GGG
Sbjct: 145 SYTYTYQGGG 154
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 1 SYSYHYYGGG 10
SY+Y Y GGG
Sbjct: 145 SYTYTYQGGG 154
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 YHYYG 8
YHYYG
Sbjct: 393 YHYYG 397
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 YHYYG 8
YHYYG
Sbjct: 393 YHYYG 397
>sp|A40_VACCC|PROTEIN A40|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SYHYYG 8
SYHY+G
Sbjct: 163 SYHYFG 168
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SYHYYGG 9
+YH YGG
Sbjct: 803 AYHLYGG 809
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 SYHYYGG 9
+YH YGG
Sbjct: 803 AYHLYGG 809
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SYHYYGG 9
+YH YGG
Sbjct: 803 AYHLYGG 809
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SYSYHYYGG 9
+YS +YGG
Sbjct: 101 AYSVEFYGG 109
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YSYHYYG 8
YSY+ YG
Sbjct: 324 YSYYVYG 330
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 2 YSYHYYG 8
YSY+ YG
Sbjct: 324 YSYYVYG 330
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 YSYHYYG 8
YSY+ YG
Sbjct: 324 YSYYVYG 330
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 2 YSYHYYG 8
YSY+ YG
Sbjct: 324 YSYYVYG 330
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 1 SYSYHYYGGG 10
SY Y YG G
Sbjct: 556 SYFYRSYGTG 565
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 YSYHYY 7
Y YH+Y
Sbjct: 1220 YKYHHY 1225
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 YSYHYY 7
Y YH+Y
Sbjct: 1220 YKYHHY 1225
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 YSYHYY 7
Y YH+Y
Sbjct: 1220 YKYHHY 1225
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 2 YSYHYYG 8
+SY+Y+G
Sbjct: 141 FSYNYFG 147
Query: 3 SYHYYG 8
S H+YG
Sbjct: 720 SMHFYG 725
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 2 YSYHYYG 8
+SY+Y+G
Sbjct: 141 FSYNYFG 147
Query: 3 SYHYYG 8
S H+YG
Sbjct: 720 SMHFYG 725
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 2 YSYHYYG 8
+SY+Y+G
Sbjct: 141 FSYNYFG 147
Query: 3 SYHYYG 8
S H+YG
Sbjct: 720 SMHFYG 725
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YSYHYYG 8
+SY+Y+G
Sbjct: 141 FSYNYFG 147
Query: 3 SYHYYG 8
S H+YG
Sbjct: 720 SMHFYG 725
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YSYHYYG 8
+SY+Y+G
Sbjct: 141 FSYNYFG 147
Query: 3 SYHYYG 8
S H+YG
Sbjct: 720 SMHFYG 725
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 YSYHYY 7
Y YH+Y
Sbjct: 1220 YRYHHY 1225
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 HYYGG 9
HY+GG
Sbjct: 153 HYFGG 157
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 HYYGG 9
HY+GG
Sbjct: 153 HYFGG 157
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 HYYGG 9
HY+GG
Sbjct: 153 HYFGG 157
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 2 YSYHYY 7
Y YHY+
Sbjct: 51 YVYHYH 56
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 YSYHY 6
Y YHY
Sbjct: 1424 YKYHY 1428
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 5 HYYGGG 10
++YGGG
Sbjct: 1976 YHYGGG 1981
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 5 HYYGGG 10
++YGGG
Sbjct: 1976 YHYGGG 1981
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 YSYHY 6
+SYHY
Sbjct: 56 HSYHY 60
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 YSYHYYGG 9
Y HY GG
Sbjct: 244 YDTHYLGG 251
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 3 SYHYYGG 9
++HYY G
Sbjct: 91 THHYYKG 97
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 HYYGGG 10
+YYG G
Sbjct: 211 YYYGSG 216
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 HYYGGG 10
+YYG G
Sbjct: 211 YYYGSG 216
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 HYYGGG 10
+YYG G
Sbjct: 211 YYYGSG 216
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SYSYHYYG 8
SY++ Y+G
Sbjct: 291 SYAHGYFG 298
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 YHYYG 8
YH YG
Sbjct: 2033 YHVYG 2037
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 YHYYG 8
YH YG
Sbjct: 2030 YHVYG 2034
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 YHYYG 8
YH YG
Sbjct: 2032 YHVYG 2036
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 2 YSYHYYGGG 10
+SY Y GG
Sbjct: 349 FSYRYGNGG 357
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 YHYYG 8
YH YG
Sbjct: 2032 YHVYG 2036
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 YSYHY 6
Y YHY
Sbjct: 1099 YLYHY 1103
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 YSYHY 6
Y YHY
Sbjct: 1099 YLYHY 1103
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 YSYHY 6
Y YHY
Sbjct: 1099 YLYHY 1103
33|SequenceR|170|161|CGRVVSYSYH
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 CGRVVSYSY 9
C RV+ +SY
Sbjct: 142 CARVILFSY 150
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 1 CGRVVSYSY 9
C RV+ +SY
Sbjct: 142 CARVLLFSY 150
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CGRVVSYSYH 10
C +VS SY
Sbjct: 16 CNHIVSNSYQ 25
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CGRVVSYSYH 10
CG + + SYH
Sbjct: 78 CGLLRATSYH 87
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CGRVVSYSYH 10
CG + + SYH
Sbjct: 78 CGLLRATSYH 87
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CGRVVSYSYH 10
CG + + SYH
Sbjct: 78 CGLLRATSYH 87
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 CGRVVSYSY 9
CG V+ Y Y
Sbjct: 354 CGFVMQYGY 362
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 CGRVVSYSY 9
CG V+ Y Y
Sbjct: 354 CGFVMQYGY 362
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 CGRVVSYSY 9
CG V+ Y Y
Sbjct: 354 CGFVMQYGY 362
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 CGRVVSY 7
CG+ VS+
Sbjct: 1366 CGKAVSF 1372
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 CGRVVSY 7
CG+ VS+
Sbjct: 1373 CGKAVSF 1379
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 2 GRVVSY 7
GRV+SY
Sbjct: 450 GRVLSY 455
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 CGRVVSYSY 9
CG V+ Y Y
Sbjct: 354 CGFVMQYGY 362
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 CGRVVSYSY 9
CG V+ Y Y
Sbjct: 354 CGFVMQYGY 362
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 CGRVVSYSY 9
CG V+ Y Y
Sbjct: 354 CGFVMQYGY 362
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 GRVVSY 7
GRV+SY
Sbjct: 276 GRVLSY 281
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 GRVVSY 7
GRV+SY
Sbjct: 276 GRVLSY 281
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 GRVVSY 7
GRV+SY
Sbjct: 276 GRVLSY 281
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 GRVVSY 7
GRV+SY
Sbjct: 276 GRVLSY 281
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 2 GRVVSY 7
G+VVSY
Sbjct: 446 GKVVSY 451
>sp|Y7K_MEASH|PUTATIVE uncharacterized 7 kDa protein|Measles virus (strain Halle) (MeV)
Query: 1 CGRVVSYSYH 10
CG + ++YH
Sbjct: 14 CGLRIWWTYH 23
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 2 GRVVSY 7
G+VVSY
Sbjct: 447 GKVVSY 452
>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RVVSYSYH 10
R +SY YH
Sbjct: 21 RSLSYRYH 28
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 5 VSYSYH 10
V Y+YH
Sbjct: 778 VKYNYH 783
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 5 VSYSYH 10
V Y+YH
Sbjct: 781 VKYNYH 786
34|SequenceR|175|166|PVIRDCGRVV
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 PVIRDCGRVV 10
P++ CGRV+
Sbjct: 1640 PILDKCGRVI 1649
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 PVIRDCGRVV 10
P++ CGRV+
Sbjct: 1640 PILDKCGRVI 1649
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 PVIRDCGRVV 10
P++ CGRV+
Sbjct: 1636 PILDKCGRVI 1645
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PVIRDCGRVV 10
P+I +C RVV
Sbjct: 3787 PLILNCERVV 3796
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PVIRDCGRVV 10
P+I +C RVV
Sbjct: 3787 PLILNCERVV 3796
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 3 IRDCGRV 9
+RDCG V
Sbjct: 64 LRDCGNV 70
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 3 IRDCGRVV 10
++DC R+V
Sbjct: 371 VKDCARMV 378
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 4 RDCGRV 9
R+CGRV
Sbjct: 419 RECGRV 424
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 4 RDCGRV 9
R+CGRV
Sbjct: 419 RECGRV 424
>sp|YM2_DHVI1|PUTATIVE uncharacterized protein M2|Dhori virus (strain Indian/1313/61)
Query: 3 IRDCGR 8
+RDCGR
Sbjct: 28 VRDCGR 33
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 PVIRDCGRVV 10
P+I C RVV
Sbjct: 3812 PLILTCERVV 3821
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 PVIRDCGRVV 10
P+I C RVV
Sbjct: 3812 PLILTCERVV 3821
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 IRDCGRVV 10
I DC R+V
Sbjct: 5623 INDCTRIV 5630
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 2 VIRDCGR 8
V+RD GR
Sbjct: 175 VVRDTGR 181
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 2 VIRDCGR 8
V+RD GR
Sbjct: 170 VVRDTGR 176
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 PVIRDCGRVV 10
P++ + GRVV
Sbjct: 218 PIMDNSGRVV 227
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 PVIRDCGRVV 10
P++ + GRVV
Sbjct: 218 PIMDNSGRVV 227
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 2 VIRDCG 7
+++DCG
Sbjct: 394 IVKDCG 399
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 2 VIRDCG 7
+++DCG
Sbjct: 394 IVKDCG 399
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 2 VIRDCG 7
+++DCG
Sbjct: 381 IVKDCG 386
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 PVIRDCGRVV 10
P++ + GRVV
Sbjct: 218 PIMDNSGRVV 227
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 IRDCGRVV 10
I DC R++
Sbjct: 5661 INDCTRII 5668
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 IRDCGRVV 10
I DC R++
Sbjct: 5711 INDCTRII 5718
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 IRDCGRVV 10
I DC R++
Sbjct: 5681 INDCTRII 5688
>sp|NSP3_ROTGA|NON-STRUCTURAL protein 3|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 2 VIRDCG 7
V+R+CG
Sbjct: 13 VLRNCG 18
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 4 RDCGRVV 10
RD G+VV
Sbjct: 202 RDAGKVV 208
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 4 RDCGRVV 10
RD G+VV
Sbjct: 202 RDAGKVV 208
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 4 RDCGRVV 10
RD G+VV
Sbjct: 202 RDAGKVV 208
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 4 RDCGRVV 10
RD G+VV
Sbjct: 202 RDAGKVV 208
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 4 RDCGRVV 10
RD G+VV
Sbjct: 193 RDAGKVV 199
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 4 RDCGRVV 10
RD G+VV
Sbjct: 208 RDAGKVV 214
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 4 RDCGRVV 10
RD G+VV
Sbjct: 193 RDAGKVV 199
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 4 RDCGRVV 10
RD G+VV
Sbjct: 204 RDAGKVV 210
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 4 RDCGRVV 10
RD G+VV
Sbjct: 193 RDAGKVV 199
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 4 RDCGRVV 10
RD G+VV
Sbjct: 194 RDAGKVV 200
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 4 RDCGRVV 10
RD G+VV
Sbjct: 194 RDAGKVV 200
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 4 RDCGRVV 10
RD G+VV
Sbjct: 201 RDAGKVV 207
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 4 RDCGRVV 10
RD G+VV
Sbjct: 202 RDAGKVV 208
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 4 RDCGRVV 10
RD G+VV
Sbjct: 194 RDAGKVV 200
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 PVIRDCGRVV 10
P++ + GRVV
Sbjct: 229 PILDNQGRVV 238
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 PVIRDCGRVV 10
P++ + GRVV
Sbjct: 228 PILDNQGRVV 237
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 PVIRDCGRVV 10
P++ + GRVV
Sbjct: 228 PILDNQGRVV 237
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PVIRDCGRVV 10
P++ DC V
Sbjct: 784 PIVVDCATYV 793
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 PVIRDCGRVV 10
P++ + GRVV
Sbjct: 229 PILDNQGRVV 238
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 PVIRDCGRVV 10
P++ + GRVV
Sbjct: 229 PILDNQGRVV 238
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 PVIRDCGRVV 10
P++ + GRVV
Sbjct: 229 PILDNQGRVV 238
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VIRDCGRVV 10
+IR+ GR++
Sbjct: 1995 MIREAGRIL 2003
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VIRDCGRVV 10
+IR+ GR++
Sbjct: 1995 MIREAGRIL 2003
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VIRDCGRVV 10
+IR+ GR++
Sbjct: 1994 MIREAGRIM 2002
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VIRDCGRVV 10
+IR+ GR++
Sbjct: 1994 MIREAGRIM 2002
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VIRDCGRVV 10
+IR+ GR++
Sbjct: 1994 MIREAGRIM 2002
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VIRDCGRVV 10
+IR+ GR++
Sbjct: 1828 MIREAGRIM 1836
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VIRDCGRVV 10
+IR+ GR++
Sbjct: 1994 MIREAGRIM 2002
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VIRDCGRVV 10
+IR+ GR++
Sbjct: 1994 MIREAGRIM 2002
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VIRDCGRVV 10
+IR+ GR++
Sbjct: 1992 MIREAGRIM 2000
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VIRDCGRVV 10
+IR+ GR++
Sbjct: 1994 MIREAGRIM 2002
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 PVIRDCGRVV 10
P++ DC V
Sbjct: 603 PIVVDCSTYV 612
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PVIRDCG 7
PV++ CG
Sbjct: 859 PVVKCCG 865
Query: 1 PVIRDCGRVV 10
P++ + GRVV
Sbjct: 215 PILDNRGRVV 224
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PVIRDCG 7
PV++ CG
Sbjct: 859 PVVKCCG 865
Query: 1 PVIRDCGRVV 10
P++ + GRVV
Sbjct: 215 PILDNRGRVV 224
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 PVIRDCGRVV 10
P++ + GRVV
Sbjct: 213 PILDNKGRVV 222
Query: 1 PVIRDCG 7
PV++ CG
Sbjct: 856 PVVKCCG 862
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PVIRDCGRVV 10
P++ + GRVV
Sbjct: 215 PILDNKGRVV 224
Query: 1 PVIRDCG 7
PV++ CG
Sbjct: 859 PVVKCCG 865
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PVIRDCGRVV 10
P++ + GRVV
Sbjct: 214 PILDNKGRVV 223
Query: 1 PVIRDCG 7
PV++ CG
Sbjct: 857 PVVKCCG 863
35|SequenceR|180|171|IYIDVPVIRD
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 IDVPVIRD 10
+D+P+I+D
Sbjct: 2234 VDIPLIKD 2241
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 IYIDVPV 7
++IDVP+
Sbjct: 8 LFIDVPI 14
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 IYIDVPV 7
++IDVP+
Sbjct: 8 LFIDVPI 14
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 IYIDVPV 7
++IDVP+
Sbjct: 8 LFIDVPI 14
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 IYIDVPV 7
++IDVP+
Sbjct: 8 LFIDVPI 14
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 YIDVPVIRD 10
++DVP++ D
Sbjct: 931 HVDVPLVLD 939
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 2 YIDVPVIRD 10
++DVP++ D
Sbjct: 953 HVDVPLVLD 961
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 YIDVPVIRD 10
++DVP++ D
Sbjct: 926 HVDVPLVLD 934
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 1 IYIDVPVIRD 10
++ID P++++
Sbjct: 356 VWIDSPILKE 365
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 1 IYIDVPVI 8
+YID PVI
Sbjct: 161 LYIDPPVI 168
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 YIDVPVIRD 10
+ D+P+I+D
Sbjct: 57 WTDLPLIQD 65
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 1 IYIDVPVIRD 10
++ID PV+++
Sbjct: 357 MWIDGPVLKE 366
>sp|BEL3_FOAMV|PROTEIN Bel-3|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 DVPVIRD 10
DVP +RD
Sbjct: 109 DVPGMRD 115
>sp|OX2V_HHV6U|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6A (strain
Query: 4 DVPVIR 9
D+P++R
Sbjct: 185 DIPIVR 190
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 YIDVPVIR 9
Y D+P+I+
Sbjct: 666 YFDLPLIQ 673
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YIDVPVIR 9
Y D+P+I+
Sbjct: 657 YFDLPLIQ 664
36|SequenceR|185|176|PPCGPIYIDV
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 3 CGPIYID 9
CGP+Y+D
Sbjct: 335 CGPVYVD 341
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 3 CGPIYID 9
CGP+Y+D
Sbjct: 320 CGPVYVD 326
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 2 PCGPIYID 9
CGP+Y+D
Sbjct: 334 SCGPVYVD 341
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 2 PCGPIYID 9
CGP+Y+D
Sbjct: 334 SCGPVYVD 341
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 3 CGPIYID 9
CGP+Y+D
Sbjct: 335 CGPVYVD 341
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 2 PCGPIYID 9
CGP+Y+D
Sbjct: 334 SCGPVYVD 341
>sp|LEAD_ADE05|I-LEADER protein|Human adenovirus C serotype 5
Query: 1 PPCGPIYIDV 10
PP G + IDV
Sbjct: 12 PPIGGVAIDV 21
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 PPCGPIYIDV 10
P GP+YI++
Sbjct: 561 PGSGPLYINL 570
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 PPCGPIYIDV 10
PP GPI + V
Sbjct: 717 PPGGPIPVSV 726
>sp|DNBI_ADE07|PROBABLE DNA-binding protein|Human adenovirus B serotype 7
Query: 1 PPCGPIYIDV 10
PP G + +DV
Sbjct: 12 PPVGGMAVDV 21
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 1 PPCGPIYIDV 10
PP G + +DV
Sbjct: 55 PPVGRMAVDV 64
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 PPCGPI 6
PP GPI
Sbjct: 716 PPGGPI 721
>sp|PG077_VAR67|TELOMERE-BINDING protein OPG077|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 PIYIDV 10
P+YID+
Sbjct: 120 PLYIDI 125
>sp|PG077_VACCT|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Tian Tan)
Query: 5 PIYIDV 10
P+YID+
Sbjct: 120 PLYIDI 125
>sp|PG077_VACCP|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain L-IVP) (VACV)
Query: 5 PIYIDV 10
P+YID+
Sbjct: 120 PLYIDI 125
>sp|PG077_VACCC|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 PIYIDV 10
P+YID+
Sbjct: 120 PLYIDI 125
>sp|PG077_VACCA|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Ankara) (VACV)
Query: 5 PIYIDV 10
P+YID+
Sbjct: 120 PLYIDI 125
>sp|PG077_MONPZ|TELOMERE-BINDING protein OPG077|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 5 PIYIDV 10
P+YID+
Sbjct: 120 PLYIDI 125
>sp|PG077_MONPV|TELOMERE-BINDING protein OPG077|Monkeypox virus (MPXV)
Query: 5 PIYIDV 10
P+YID+
Sbjct: 120 PLYIDI 125
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 PPCGPI 6
PP GPI
Sbjct: 717 PPGGPI 722
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 PPCGPI 6
PP GPI
Sbjct: 717 PPGGPI 722
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 PPCGPI 6
PP GPI
Sbjct: 717 PPGGPI 722
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 PPCGPI 6
PP GPI
Sbjct: 716 PPGGPI 721
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 PPCGPIY 7
PP GP Y
Sbjct: 313 PPAGPRY 319
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 CGPIY 7
CGP+Y
Sbjct: 505 CGPVY 509
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 PCGPIYI 8
P GP Y+
Sbjct: 2232 PTGPAYV 2238
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 CGPIY 7
CGP+Y
Sbjct: 505 CGPVY 509
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 CGPIY 7
CGP+Y
Sbjct: 505 CGPVY 509
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3
Query: 2 PCGPIYID 9
PCGP +D
Sbjct: 244 PCGPFNMD 251
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 PCGPIYI 8
P GP Y+
Sbjct: 2232 PTGPAYV 2238
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 CGPIY 7
CGP+Y
Sbjct: 505 CGPVY 509
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 CGPIY 7
CGP+Y
Sbjct: 504 CGPVY 508
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 CGPIY 7
CGP+Y
Sbjct: 504 CGPVY 508
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 CGPIY 7
CGP+Y
Sbjct: 505 CGPVY 509
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 CGPIY 7
CGP+Y
Sbjct: 504 CGPVY 508
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 CGPIY 7
CGP+Y
Sbjct: 504 CGPVY 508
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 CGPIY 7
CGP+Y
Sbjct: 504 CGPVY 508
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 CGPIY 7
CGP+Y
Sbjct: 504 CGPVY 508
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 CGPIY 7
CGP+Y
Sbjct: 504 CGPVY 508
Query: 3 CGPIYI 8
CGP+++
Sbjct: 281 CGPVFL 286
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PCGPIY 7
PCG IY
Sbjct: 19 PCGYIY 24
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PCGPIY 7
PCG IY
Sbjct: 19 PCGYIY 24
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PCGPIY 7
PCG IY
Sbjct: 19 PCGYIY 24
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 3 CGPIY 7
CGP+Y
Sbjct: 505 CGPVY 509
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 CGPIY 7
CGP+Y
Sbjct: 505 CGPVY 509
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 CGPIY 7
CGP+Y
Sbjct: 504 CGPVY 508
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 PPCGPI 6
PP GP+
Sbjct: 716 PPGGPV 721
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 CGPIY 7
CGP+Y
Sbjct: 504 CGPVY 508
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 CGPIY 7
CGP+Y
Sbjct: 505 CGPVY 509
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 2 PCGPIY 7
P GPIY
Sbjct: 428 PTGPIY 433
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 2 PCGPIYI 8
P GPIYI
Sbjct: 435 PSGPIYI 441
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 PPCGPI 6
PP GP+
Sbjct: 716 PPGGPV 721
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 CGPIY 7
CGP+Y
Sbjct: 503 CGPVY 507
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 PPCGPI 6
PP GP+
Sbjct: 714 PPGGPV 719
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 PPCGPI 6
PP GP+
Sbjct: 720 PPGGPV 725
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 3 CGPIY 7
CGP+Y
Sbjct: 504 CGPVY 508
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 PPCGPI 6
PP GP+
Sbjct: 716 PPGGPV 721
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 PPCGPI 6
PP GP+
Sbjct: 715 PPGGPV 720
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 CGPIY 7
CGP++
Sbjct: 386 CGPLF 390
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 3 CGPIY 7
CGP++
Sbjct: 386 CGPLF 390
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 3 CGPIY 7
CGP+Y
Sbjct: 505 CGPVY 509
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 PPCGPI 6
PP GP+
Sbjct: 715 PPGGPV 720
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 3 CGPIY 7
CGP+Y
Sbjct: 504 CGPVY 508
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 5 PIYIDV 10
P+Y+D+
Sbjct: 3 PVYVDI 8
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 PPCGPI 6
PP GP+
Sbjct: 715 PPGGPV 720
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 PPCGPI 6
PP GP+
Sbjct: 715 PPGGPV 720
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 GPIYID 9
GP Y+D
Sbjct: 1595 GPTYLD 1600
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 GPIYID 9
GP Y+D
Sbjct: 1572 GPTYLD 1577
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 PIYIDV 10
P+Y+D+
Sbjct: 3 PVYVDI 8
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 PPCGPI 6
PP GPI
Sbjct: 40 PPPGPI 45
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 GPIYID 9
GP Y+D
Sbjct: 1572 GPTYLD 1577
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 GPIYID 9
GP Y+D
Sbjct: 1595 GPTYLD 1600
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 4 GPIYID 9
GP+YI+
Sbjct: 287 GPLYIN 292
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 CGPIYIDV 10
CG +ID+
Sbjct: 3003 CGSDFIDI 3010
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 1 PPCGPI 6
PP GPI
Sbjct: 445 PPLGPI 450
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PPCGPIYIDV 10
P C +Y+ V
Sbjct: 1198 PICSSVYLGV 1207
37|SequenceR|190|181|LAEATPPCGP
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 1 LAEATPPC 8
L +ATPPC
Sbjct: 515 LDDATPPC 522
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 LAEATPPC 8
L +ATPPC
Sbjct: 514 LDDATPPC 521
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 6 PPCG 9
PPCG
Sbjct: 92 PPCG 95
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 PPCG 9
PPCG
Sbjct: 147 PPCG 150
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 1 LAEATPPCGP 10
L EAT C P
Sbjct: 67 LVEATKFCAP 76
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 1 LAEATPPCGP 10
L EAT C P
Sbjct: 67 LVEATKFCAP 76
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 5 TPPCGP 10
+PPC P
Sbjct: 683 SPPCIP 688
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 PPCG 9
PPCG
Sbjct: 141 PPCG 144
>sp|UL144_HCMVO|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Toledo) (HHV-5)
Query: 3 EATPPCG 9
E PPCG
Sbjct: 33 ECCPPCG 39
>sp|UL144_HCMVM|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 EATPPCG 9
E PPCG
Sbjct: 33 ECCPPCG 39
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 ATPPCG 9
A+PPC
Sbjct: 139 ASPPCA 144
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 LAEATPPC 8
L +AT PC
Sbjct: 484 LDDATKPC 491
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 1 LAEATPPCGP 10
L EAT C P
Sbjct: 67 LVEATRFCAP 76
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 1 LAEATPPCGP 10
L EAT C P
Sbjct: 67 LVEATRFCAP 76
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 1 LAEATPPC 8
L +AT PC
Sbjct: 507 LDDATSPC 514
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 AEATPPC 8
A+A+PPC
Sbjct: 1605 AKASPPC 1611
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 1 LAEATPPC 8
L +AT PC
Sbjct: 501 LDDATTPC 508
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 LAEATPPC 8
L +ATP C
Sbjct: 519 LDDATPAC 526
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 1 LAEATPPC 8
L +AT PC
Sbjct: 522 LDDATQPC 529
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 LAEATPPC 8
L +AT PC
Sbjct: 481 LDDATDPC 488
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 LAEATPPC 8
L +AT PC
Sbjct: 479 LDDATDPC 486
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LAEATPPC 8
L TPPC
Sbjct: 270 LPHGTPPC 277
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 PPCGP 10
PPC P
Sbjct: 108 PPCRP 112
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 1 LAEATPPC 8
L +AT PC
Sbjct: 522 LDDATQPC 529
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 1 LAEATPPC 8
L +AT PC
Sbjct: 522 LDDATQPC 529
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 PPCGP 10
PPC P
Sbjct: 108 PPCRP 112
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 1 LAEATPPC 8
L +AT PC
Sbjct: 521 LDDATVPC 528
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 1 LAEATPPC 8
L +ATP C
Sbjct: 522 LDDATPGC 529
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 3 EATPP 7
EATPP
Sbjct: 74 EATPP 78
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 3 EATPP 7
EATPP
Sbjct: 74 EATPP 78
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 LAEATPPC 8
L +ATP C
Sbjct: 515 LDDATPQC 522
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 6 PPCGP 10
PPC P
Sbjct: 276 PPCAP 280
>sp|MC160_MCV1|PROTEIN MC160|Molluscum contagiosum virus subtype 1
Query: 3 EATPPC 8
EATP C
Sbjct: 200 EATPAC 205
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 LAEATPPC 8
L +ATP C
Sbjct: 515 LDDATPQC 522
38|SequenceR|195|186|LIGYLLAEAT
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 IGYLLA 7
+GYLLA
Sbjct: 1283 VGYLLA 1288
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 IGYLLA 7
+GYLLA
Sbjct: 1283 VGYLLA 1288
>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LIGYLLA 7
L+GY+LA
Sbjct: 194 LLGYVLA 200
>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LIGYLLA 7
L+GY+LA
Sbjct: 194 LLGYVLA 200
39|SequenceR|200|191|KRQLQLIGYL
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 RQLQLIGYL 10
++LQ++GYL
Sbjct: 1043 KRLQILGYL 1051
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 RQLQLIGYL 10
++LQ++GYL
Sbjct: 1043 KRLQILGYL 1051
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 RQLQLIGYL 10
++LQ++GYL
Sbjct: 1042 KRLQILGYL 1050
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 RQLQLIGYL 10
++LQ++GYL
Sbjct: 1042 KRLQILGYL 1050
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 RQLQLIGYL 10
++LQ++GYL
Sbjct: 1042 KRLQILGYL 1050
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 KRQLQLIG 8
KRQL L+G
Sbjct: 2501 KRQLNLLG 2508
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 RQLQLIGYL 10
++LQ++GYL
Sbjct: 1042 KRLQILGYL 1050
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 3 QLQLIGYL 10
+LQL+GY+
Sbjct: 86 RLQLLGYV 93
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KRQLQLI 7
KR+LQLI
Sbjct: 104 KRRLQLI 110
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KRQLQLI 7
KR+LQLI
Sbjct: 104 KRRLQLI 110
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KRQLQLI 7
KR+LQLI
Sbjct: 104 KRRLQLI 110
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KRQLQLI 7
KR+LQLI
Sbjct: 104 KRRLQLI 110
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KRQLQLI 7
KR+LQLI
Sbjct: 104 KRRLQLI 110
>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 QLQLIGYL 10
+LQL+GY+
Sbjct: 86 RLQLLGYV 93
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 RQLQLIGYL 10
RQLQ I Y
Sbjct: 709 RQLQPINYF 717
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 3 QLQLIGYL 10
+LQL+GY+
Sbjct: 86 RLQLLGYV 93
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 KRQLQLIGYL 10
K+QL + YL
Sbjct: 780 KKQLMKLAYL 789
>sp|UL39_HCMVA|UNCHARACTERIZED protein UL39|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QLQLIGY 9
QLQ++G+
Sbjct: 113 QLQMVGH 119
40|SequenceR|205|196|RERKIKRQLQ
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 RKIKRQLQ 10
R+I++QLQ
Sbjct: 3090 RRIQQQLQ 3097
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 2 ERKIKRQLQ 10
+RK+++QLQ
Sbjct: 714 QRKLEQQLQ 722
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 1 RERKIKRQLQ 10
+ER++KR+++
Sbjct: 799 KEREVKREIK 808
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 1 RERKIKRQL 9
RE+K ++QL
Sbjct: 111 REKKARKQL 119
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 3 RKIKRQLQ 10
RK++RQ+Q
Sbjct: 170 RKVQRQIQ 177
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 RERKIKRQLQ 10
+ER++KR ++
Sbjct: 1120 KERRVKRNVE 1129
41|SequenceR|213|201|RRYWIQLRRERKI
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 1 RRYWIQLRRER 11
R YW+ LRR R
Sbjct: 432 RAYWLALRRLR 442
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 1 RRYWIQLRRER 11
R YW+ +RR R
Sbjct: 434 RAYWLAMRRLR 444
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 2 RYWIQLRRERKI 13
RYW +R+E I
Sbjct: 31 RYWENIRKENAI 42
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 3 YWIQLRRE 10
YW+ RRE
Sbjct: 265 YWVSCRRE 272
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 RYWIQLRRERKI 13
R+W + RER++
Sbjct: 2922 RFWDLVHREREL 2933
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 RYWIQLRRERKI 13
R+W + RER++
Sbjct: 2922 RFWDLVHREREL 2933
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 RYWIQLRRERKI 13
R+W + RER++
Sbjct: 2921 RFWDLVHREREL 2932
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 WIQLRR 9
WI LRR
Sbjct: 259 WINLRR 264
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 RYWIQLRRER 11
R W++LR R
Sbjct: 1005 RAWLELRAMR 1014
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 RYWIQLRRERK 12
R+W + RER+
Sbjct: 2947 RFWALVDRERE 2957
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 2 RYWIQLRRERKI 13
+YW +R+E I
Sbjct: 31 QYWENIRKENAI 42
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 RRYWIQ 6
R+YW Q
Sbjct: 318 RKYWFQ 323
>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YWIQL 7
YWIQL
Sbjct: 14 YWIQL 18
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 RRYWIQLRR 9
++YW +L R
Sbjct: 606 KKYWARLYR 614
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 1 RRYWIQL 7
+R WIQL
Sbjct: 572 KRLWIQL 578
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 RRYWIQ 6
R+YW Q
Sbjct: 318 RKYWFQ 323
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 RRYWIQ 6
R+YW Q
Sbjct: 318 RKYWFQ 323
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YWIQL 7
YWIQL
Sbjct: 14 YWIQL 18
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 RRYWIQ 6
R+YW Q
Sbjct: 318 RKYWFQ 323
>sp|F_HCV1|F protein|Hepatitis C virus genotype 1a
Query: 4 WIQLRRER 11
W+ RRER
Sbjct: 45 WVCARRER 52
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 1 RRYWIQ 6
R YW+Q
Sbjct: 316 RSYWLQ 321
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RYWIQLRRERKI 13
R+W + RER +
Sbjct: 2921 RFWELVDRERNL 2932
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 RRYWIQ 6
RR+WI+
Sbjct: 77 RRHWIE 82
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 RRYWIQ 6
RR+WI+
Sbjct: 77 RRHWIE 82
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 RRYWIQ 6
RR+WI+
Sbjct: 77 RRHWIE 82
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 RRYWIQ 6
RR+WI+
Sbjct: 77 RRHWIE 82
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 RRYWIQ 6
RR+WI+
Sbjct: 77 RRHWIE 82
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 RRYWIQ 6
RR+WI+
Sbjct: 77 RRHWIE 82
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 RRYWIQ 6
RR+WI+
Sbjct: 77 RRHWIE 82
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 RRYWIQ 6
RR+WI+
Sbjct: 77 RRHWIE 82
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 RRYWIQ 6
RR+WI+
Sbjct: 77 RRHWIE 82
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 2 RYWIQLRRERKI 13
R W LRRE I
Sbjct: 34 RLWNLLRRENAI 45
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 3 YWIQLRRER 11
YW +R+E+
Sbjct: 38 YWESMRKEQ 46
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 1 RRYWI 5
+RYW+
Sbjct: 436 KRYWV 440
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 2 RYWIQLRRE 10
++W Q+R E
Sbjct: 31 KHWAQVRLE 39
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 WIQLRRERK 12
W++L E+K
Sbjct: 152 WVKLVEEKK 160
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 RYWIQLRRERK 12
R+W + +ER+
Sbjct: 2951 RFWALVDKERE 2961
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 RYWIQLRRERK 12
R+W + +ER+
Sbjct: 2951 RFWALVDKERE 2961
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 WIQLRRERK 12
W++L E+K
Sbjct: 152 WVKLVEEKK 160
THE END