1|Sequence|1|10|MAVLSAPGLR
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 3 VLSAPGLR 10
VL+APG+R
Sbjct: 1100 VLTAPGVR 1107
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 3 VLSAPGLR 10
VL+APG+R
Sbjct: 1100 VLTAPGVR 1107
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 MAVLSAPGLR 10
+AVL APG R
Sbjct: 1040 VAVLCAPGTR 1049
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 MAVLSAPGLR 10
+AVL APG R
Sbjct: 1040 VAVLCAPGTR 1049
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 MAVLSAPGLR 10
+AVL APG R
Sbjct: 1040 VAVLCAPGTR 1049
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 4 LSAPGLR 10
+S+PGLR
Sbjct: 67 ISSPGLR 73
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 LSAPGLR 10
+S+PGLR
Sbjct: 390 ISSPGLR 396
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MAVLSAPGL 9
MA+ APG+
Sbjct: 1833 MAITGAPGI 1841
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MAVLSAPGL 9
MA+ APG+
Sbjct: 1832 MAITGAPGI 1840
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MAVLSAPGL 9
MA+ APG+
Sbjct: 1832 MAITGAPGI 1840
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MAVLSAPGL 9
MA+ APG+
Sbjct: 1833 MAITGAPGI 1841
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MAVLSAPGL 9
MA+ APG+
Sbjct: 1832 MAITGAPGI 1840
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MAVLSAPGL 9
MA+ APG+
Sbjct: 1666 MAITGAPGI 1674
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MAVLSAPGL 9
MA+ APG+
Sbjct: 1832 MAITGAPGI 1840
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MAVLSAPGL 9
MA+ APG+
Sbjct: 1832 MAITGAPGI 1840
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MAVLSAPGL 9
MA+ APG+
Sbjct: 1832 MAITGAPGI 1840
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 1 MAVLSAPG 8
+A+L++PG
Sbjct: 372 VAILASPG 379
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 2 AVLSAPGLR 10
AVLSA G+R
Sbjct: 539 AVLSANGIR 547
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 LSAPGLR 10
LSAP LR
Sbjct: 2210 LSAPSLR 2216
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 LSAPGLR 10
LSAP LR
Sbjct: 2210 LSAPSLR 2216
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 AVLSAPGL 9
A+L PGL
Sbjct: 1760 AILGIPGL 1767
2|Sequence|6|15|APGLRGFRIL
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 APGLRGFRIL 10
APG++GF L
Sbjct: 344 APGIKGFGFL 353
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 APGLRGFRIL 10
APG++GF L
Sbjct: 344 APGIKGFGFL 353
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 APGLRGFRIL 10
APG++GF L
Sbjct: 346 APGVKGFGFL 355
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 APGLRGFRIL 10
APG++GF L
Sbjct: 345 APGVKGFGFL 354
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 APGLRGFRIL 10
APG++GF L
Sbjct: 346 APGVKGFGFL 355
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 3 GLRGFRI 9
GLRGF++
Sbjct: 172 GLRGFQV 178
>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9
Query: 2 PGLRGFRI 9
P L+GF I
Sbjct: 235 PALKGFTI 242
>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9
Query: 2 PGLRGFRI 9
P L+GF I
Sbjct: 235 PALKGFTI 242
>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8
Query: 2 PGLRGFRI 9
P L+GF I
Sbjct: 235 PALKGFTI 242
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 3 GLRGFR 8
GLRGF+
Sbjct: 172 GLRGFQ 177
>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 APGLRGFRIL 10
A GL+GF +L
Sbjct: 309 AFGLQGFAVL 318
>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 APGLRGFRIL 10
A GL+GF +L
Sbjct: 309 AFGLQGFAVL 318
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 PGLRGFRIL 10
PGL G++ L
Sbjct: 1459 PGLYGYKYL 1467
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 PGLRGFRIL 10
PGL G++ L
Sbjct: 1459 PGLYGYKYL 1467
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 PGLRGFRIL 10
PGL G++ L
Sbjct: 1459 PGLYGYKYL 1467
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 2 PGLRGFR 8
PG RG R
Sbjct: 241 PGFRGLR 247
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 2 PGLRGFR 8
PG RG R
Sbjct: 241 PGFRGLR 247
3|Sequence|11|20|GFRILGLRSS
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 FRILGLR 8
+R+LGLR
Sbjct: 185 YRVLGLR 191
Query: 1 GFRILGLRSS 10
G R+ GL+ S
Sbjct: 1301 GIRLTGLKCS 1310
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GFRILG 6
GFR+LG
Sbjct: 1667 GFRVLG 1672
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GFRILG 6
GFR+LG
Sbjct: 1667 GFRVLG 1672
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 GFRILGLRSS 10
FR +GL SS
Sbjct: 1753 AFRRIGLNSS 1762
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 GFRILGLRSS 10
FR +GL SS
Sbjct: 1753 AFRRIGLNSS 1762
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 GFRILGLRSS 10
FR +GL SS
Sbjct: 1753 AFRRIGLNSS 1762
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GFRILGL 7
G R+LGL
Sbjct: 266 GMRVLGL 272
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GFRILGL 7
G R+LGL
Sbjct: 266 GMRVLGL 272
4|Sequence|16|25|GLRSSVGPAV
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GLRSSVGP 8
GL+ SVGP
Sbjct: 6602 GLQPSVGP 6609
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 202 RSSVGPCI 209
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 207 RSSVGPCI 214
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 209 RSSVGPCI 216
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 209 RSSVGPCI 216
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 209 RSSVGPCI 216
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 209 RSSVGPCI 216
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 202 RSSVGPCI 209
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 207 RSSVGPCI 214
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 207 RSSVGPCI 214
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 207 RSSVGPCI 214
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 207 RSSVGPCI 214
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 209 RSSVGPCI 216
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 209 RSSVGPCI 216
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 207 RSSVGPCI 214
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 RSSVGPAV 10
RSSVGP +
Sbjct: 207 RSSVGPCI 214
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 LRSSVGPA 9
LRS V PA
Sbjct: 558 LRSDVAPA 565
5|Sequence|21|30|VGPAVQARGV
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VGPAVQARG 9
+GPA+QA+
Sbjct: 2364 IGPALQAKA 2372
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VGPAVQARG 9
+GPA+QA+
Sbjct: 2364 IGPALQAKA 2372
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 GPAVQARG 9
GPAV +RG
Sbjct: 112 GPAVPSRG 119
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 GPAVQARG 9
GPAV +RG
Sbjct: 112 GPAVPSRG 119
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 338 PSIQSRGL 345
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 338 PSIQSRGL 345
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 338 PSIQSRGL 345
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 339 PSIQSRGL 346
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 338 PSIQSRGL 345
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 338 PSIQSRGL 345
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 3 PAVQARGV 10
P++Q+RG+
Sbjct: 338 PSIQSRGL 345
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2364 IGPGLQAKA 2372
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2361 IGPGLQAKA 2369
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2364 IGPGLQAKA 2372
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2364 IGPGLQAKA 2372
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2364 IGPGLQAKA 2372
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2366 IGPGLQAKA 2374
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2365 IGPGLQAKA 2373
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2366 IGPGLQAKA 2374
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2360 IGPGLQAKA 2368
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2360 IGPGLQAKA 2368
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2360 IGPGLQAKA 2368
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2363 IGPGLQAKA 2371
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2363 IGPGLQAKA 2371
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2360 IGPGLQAKA 2368
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2363 IGPGLQAKA 2371
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2363 IGPGLQAKA 2371
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2363 IGPGLQAKA 2371
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VGPAVQARG 9
+GP +QA+
Sbjct: 2360 IGPGLQAKA 2368
>sp|CORE5_ADE12|CORE-CAPSID bridging protein|Human adenovirus A serotype 12
Query: 1 VGPAVQARGV 10
+GP+ + RG+
Sbjct: 157 LGPSEEKRGI 166
6|Sequence|26|35|QARGVHQSVA
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 2 ARGVHQSVA 10
A GVH S+A
Sbjct: 233 AFGVHHSIA 241
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 4 GVHQSVA 10
G+H S+A
Sbjct: 243 GIHHSIA 249
7|Sequence|31|40|HQSVATDGPS
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 HQSVATDGPS 10
H SVAT G S
Sbjct: 1924 HSSVATVGGS 1933
>sp|NCAP_MERS1|NUCLEOPROTEIN East respiratory syndrome-related coronavirus
Query: 1 HQSVATDGPS 10
H+ ATD PS
Sbjct: 124 HEDGATDAPS 133
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 VATDGP 9
++TDGP
Sbjct: 1907 ISTDGP 1912
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 QSVATDGP 9
Q TDGP
Sbjct: 618 QYTGTDGP 625
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 QSVATDGP 9
Q TDGP
Sbjct: 614 QYTGTDGP 621
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 QSVATDGP 9
Q TDGP
Sbjct: 618 QYTGTDGP 625
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 QSVATDGP 9
Q TDGP
Sbjct: 617 QYAGTDGP 624
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 QSVATDGP 9
Q TDGP
Sbjct: 621 QYAGTDGP 628
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 QSVATDGP 9
Q TDGP
Sbjct: 621 QYAGTDGP 628
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HQSVATDGPS 10
HQ + GPS
Sbjct: 187 HQLLMASGPS 196
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HQSVATDGPS 10
HQ + GPS
Sbjct: 187 HQLLMASGPS 196
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 HQSVATDGPS 10
HQ + GPS
Sbjct: 187 HQLLMASGPS 196
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 3 SVATDGP 9
S+AT GP
Sbjct: 143 SIATKGP 149
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 3 SVATDGP 9
S+AT GP
Sbjct: 143 SIATQGP 149
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 QSVATDGPS 10
QSVA+ PS
Sbjct: 3047 QSVASPAPS 3055
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 QSVATDGPS 10
QSVA+ PS
Sbjct: 3042 QSVASPAPS 3050
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 QSVATDGPS 10
QSVA+ PS
Sbjct: 3069 QSVASPAPS 3077
8|Sequence|36|45|TDGPSSTQPA
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 TDGPSSTQ 8
TDGP+S+Q
Sbjct: 242 TDGPASSQ 249
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 224 TDGPSNEQAS 233
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 224 TDGPSNEQAS 233
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 243 TDGPSNGQAS 252
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 228 TDGPSNGQAS 237
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 243 TDGPSNGQAS 252
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 223 TDGPSNGQAS 232
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 223 TDGPSNGQAS 232
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 243 TDGPSNGQAS 252
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 243 TDGPSNGQAS 252
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 243 TDGPSNGQAS 252
>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TDGPSSTQPA 10
T+ PSS QPA
Sbjct: 216 TNCPSSPQPA 225
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 243 TDGPSNGQAS 252
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 243 TDGPSNGQAS 252
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 223 TDGPSNGQAS 232
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 215 TDGPSNGQAS 224
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 223 TDGPSNGQAS 232
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 223 TDGPSNGQAS 232
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 223 TDGPSNGQAS 232
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 223 TDGPSNGQAS 232
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 223 TDGPSNGQAS 232
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 243 TDGPSNGQAS 252
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 243 TDGPSNGQAS 252
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 243 TDGPSNGQAS 252
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 223 TDGPSNGQAS 232
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 243 TDGPSNGQAS 252
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 TDGPSSTQPA 10
TDGPS+ Q +
Sbjct: 243 TDGPSNGQAS 252
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GPSSTQPA 10
P ST PA
Sbjct: 761 APDSTDPA 768
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 1 TDGPSSTQPA 10
TDGPS Q +
Sbjct: 243 TDGPSDGQAS 252
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TDGPSSTQPA 10
T GPS+ +PA
Sbjct: 2070 TTGPSTPRPA 2079
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TDGPSSTQPA 10
T GPS+ +PA
Sbjct: 2071 TTGPSTPRPA 2080
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 DGPSSTQPA 10
D P+S +PA
Sbjct: 771 DSPTSAEPA 779
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 2 DGPSSTQP 9
D PSS QP
Sbjct: 384 DQPSSHQP 391
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 2 DGPSSTQP 9
D PSS QP
Sbjct: 384 DQPSSHQP 391
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 2 DGPSSTQP 9
D PSS QP
Sbjct: 384 DQPSSHQP 391
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 2 DGPSSTQP 9
D PSS QP
Sbjct: 384 DQPSSHQP 391
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 2 DGPSSTQP 9
D PSS QP
Sbjct: 383 DQPSSHQP 390
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 2 DGPSSTQP 9
D PSS QP
Sbjct: 384 DQPSSHQP 391
9|Sequence|41|50|STQPALPKAR
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 3 QPALPK 8
QPA+PK
Sbjct: 324 QPAIPK 329
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 3 QPALPK 8
QPA+PK
Sbjct: 324 QPAIPK 329
>sp|VIF_HV1V9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 TQPALPKAR 10
T+P LP R
Sbjct: 159 TKPPLPSVR 167
>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 TQPALPKAR 10
T+P LP R
Sbjct: 159 TRPPLPSVR 167
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 STQPALPKA 9
ST PA+P+A
Sbjct: 1218 STPPAVPQA 1226
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 4 PALPKAR 10
P+L KAR
Sbjct: 1124 PSLKKAR 1130
10|Sequence|46|55|LPKARAVAPK
>sp|NS7A_SARS|ORF7A protein|Severe acute respiratory syndrome coronavirus
Query: 3 KARAVAPK 10
+AR+V+PK
Sbjct: 78 RARSVSPK 85
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 LPKARAVAP 9
LPK R ++P
Sbjct: 213 LPKNRLISP 221
>sp|NS7A_SARS2|ORF7A protein|Severe acute respiratory syndrome coronavirus
Query: 3 KARAVAPK 10
+AR+V+PK
Sbjct: 78 RARSVSPK 85
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 LPKARAVAP 9
LPK R ++P
Sbjct: 213 LPKNRLISP 221
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 3 KARAVAP 9
KARA AP
Sbjct: 333 KARATAP 339
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 3 KARAVAP 9
KARA AP
Sbjct: 332 KARATAP 338
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 3 KARAVAP 9
KARA AP
Sbjct: 333 KARATAP 339
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 3 KARAVAP 9
KARA AP
Sbjct: 333 KARATAP 339
>sp|UL76_HCMVA|PROTEIN UL76|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LPKARAVA 8
LP+ARA A
Sbjct: 219 LPRARASA 226
11|Sequence|51|60|AVAPKPSSRG
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 APKPSSR 9
APKP+SR
Sbjct: 725 APKPTSR 731
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 APKPSSR 9
APKP+SR
Sbjct: 725 APKPTSR 731
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 APKPSSR 9
APKP SR
Sbjct: 725 APKPESR 731
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 APKPSSRG 10
+PKP S+G
Sbjct: 1513 SPKPCSKG 1520
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 APKPSSRG 10
+PKP S+G
Sbjct: 1513 SPKPCSKG 1520
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 APKPSSRG 10
+PKP S+G
Sbjct: 1513 SPKPCSKG 1520
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 APKPSSR 9
APKP SR
Sbjct: 725 APKPDSR 731
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 APKPSSR 9
APKP SR
Sbjct: 725 APKPDSR 731
>sp|VE6_HPV27|PROTEIN E6|Human papillomavirus 27
Query: 3 APKPSSR 9
AP P+SR
Sbjct: 150 APDPASR 156
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VAPKPSS 8
+APKP S
Sbjct: 47 LAPKPKS 53
>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 VAPKPSS 8
+APKP S
Sbjct: 47 LAPKPKS 53
>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 PKPSS 8
PKPSS
Sbjct: 233 PKPSS 237
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 APKPSS 8
AP+PSS
Sbjct: 740 APRPSS 745
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 PKPSSRG 10
PKP SR
Sbjct: 1507 PKPKSRA 1513
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 VAPKPSSRG 10
V P SSRG
Sbjct: 130 VVPSTSSRG 138
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VAPKPSSRG 10
V P SSRG
Sbjct: 130 VVPSTSSRG 138
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VAPKPSSRG 10
V P SSRG
Sbjct: 130 VVPSTSSRG 138
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 1 AVAPKPSS 8
AVAP PS+
Sbjct: 405 AVAPPPSA 412
12|Sequence|56|65|PSSRGEYVVA
>sp|B1_HHV6Z|PROTEIN B1|Human herpesvirus 6B (strain Z29)
Query: 1 PSSRGEYV 8
PSSRG ++
Sbjct: 82 PSSRGRHI 89
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 4 RGEYVVA 10
R EYVVA
Sbjct: 454 RNEYVVA 460
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 4 RGEYVVA 10
R EYVVA
Sbjct: 454 RNEYVVA 460
>sp|PHOSP_VSIVS|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 SSRGEYV 8
SSRGE++
Sbjct: 226 SSRGEFI 232
>sp|PHOSP_VSIVG|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 SSRGEYV 8
SSRGE++
Sbjct: 226 SSRGEFI 232
>sp|PHOSP_VSIVN|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 SSRGEYV 8
SSRGE++
Sbjct: 226 SSRGEFI 232
>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 SSRGEYV 8
SSRGE++
Sbjct: 226 SSRGEFI 232
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PSSRGEYVVA 10
P+S EYVV+
Sbjct: 567 PNSANEYVVS 576
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PSSRGEYVVA 10
P+S EYVV+
Sbjct: 567 PNSANEYVVS 576
>sp|PHOSP_VSIVC|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 SSRGEYV 8
SSRGE++
Sbjct: 226 SSRGEFI 232
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SSRGEYVV 9
+ RG+Y+V
Sbjct: 342 TERGDYIV 349
>sp|PHOSP_VSIVM|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 SSRGEYV 8
SSRGE++
Sbjct: 226 SSRGEFI 232
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 4 RGEYVV 9
RG+Y+V
Sbjct: 118 RGDYIV 123
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 PSSRGEYVV 9
PS R EY++
Sbjct: 2625 PSQRVEYLL 2633
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 PSSRGEYVV 9
PS R EY++
Sbjct: 2628 PSQRVEYLL 2636
13|Sequence|61|70|EYVVAKLDDL
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 VVAKLDDL 10
+ AK+DDL
Sbjct: 112 IAAKIDDL 119
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 EYVVAKLDDL 10
+ VVA +DDL
Sbjct: 1280 QQVVAVMDDL 1289
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EYVVAKLDDL 10
EY+ +LD+L
Sbjct: 685 EYLCKQLDNL 694
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EYVVAKLDDL 10
EY KLD+L
Sbjct: 95 EYADEKLDEL 104
14|Sequence|66|75|KLDDLVNWAR
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 KLDDLVNWAR 10
K+D +NW +
Sbjct: 1137 KIDKFINWLK 1146
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 1 KLDDLVNWA 9
KL D+V WA
Sbjct: 351 KLADMVQWA 359
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate
Query: 2 LDDLVNWA 9
L+DL+ WA
Sbjct: 37 LEDLIEWA 44
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LDDLVNWA 9
L+DL+ WA
Sbjct: 37 LEDLIEWA 44
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LDDLVNWA 9
L+DL+ WA
Sbjct: 37 LEDLIEWA 44
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 KLDDLVNWAR 10
+LD NW R
Sbjct: 639 RLDAACNWTR 648
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 KLDDLVNWAR 10
+LD NW R
Sbjct: 639 RLDAACNWTR 648
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 KLDDLVNWAR 10
+LD NW R
Sbjct: 639 RLDAACNWTR 648
>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 DDLVNWAR 10
DDLVN+ R
Sbjct: 107 DDLVNYIR 114
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 1 KLDDLVNW 8
KLD + NW
Sbjct: 480 KLDSIGNW 487
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 KLDDLVNWAR 10
+LD NW R
Sbjct: 639 RLDAACNWTR 648
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 2 LDDLVNWA 9
L D+V WA
Sbjct: 359 LSDMVQWA 366
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 LDDLVNWA 9
L D+V WA
Sbjct: 358 LTDMVQWA 365
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 LDDLVNWA 9
L D+V WA
Sbjct: 350 LSDMVQWA 357
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 2 LDDLVNWA 9
L D+V WA
Sbjct: 354 LSDMVQWA 361
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 2 LDDLVNWA 9
L D+V WA
Sbjct: 312 LSDMVQWA 319
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 3 DDLVNWAR 10
D++VNW +
Sbjct: 92 DNVVNWEK 99
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 3 DDLVNWAR 10
D++VNW +
Sbjct: 92 DNVVNWEK 99
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 DLVNW 8
DL+NW
Sbjct: 947 DLLNW 951
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DLVNW 8
DL+NW
Sbjct: 947 DLLNW 951
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KLDDLVNW 8
K++D V W
Sbjct: 41 KMEDFVPW 48
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 5 LVNWA 9
+VNWA
Sbjct: 713 IVNWA 717
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka
Query: 4 DLVNWAR 10
DLV+W +
Sbjct: 27 DLVSWIK 33
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 4 DLVNWAR 10
DLV+W +
Sbjct: 27 DLVSWIK 33
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 3 DDLVNW 8
DDL W
Sbjct: 281 DDLARW 286
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 2 LDDLVNWA 9
++DL+N+A
Sbjct: 106 IEDLLNYA 113
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 DDLVNW 8
DDL+N+
Sbjct: 347 DDLINY 352
15|Sequence|71|80|VNWARRSSLW
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 3 WARRSSLW 10
W RRS LW
Sbjct: 123 WPRRSRLW 130
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 3 WARRSSLW 10
W RRS LW
Sbjct: 123 WPRRSRLW 130
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 3 WARRSSLW 10
W RRS LW
Sbjct: 123 WPRRSRLW 130
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 3 WARRSSLW 10
W RRS LW
Sbjct: 123 WPRRSRLW 130
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 3 WARRSSLW 10
W RR LW
Sbjct: 124 WPRRLRLW 131
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 3 WARRSSLW 10
W RR LW
Sbjct: 124 WPRRLRLW 131
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 WARRSSLW 10
W RR ++W
Sbjct: 92 WPRRVNIW 99
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain
Query: 3 WARRSSLW 10
W RR ++W
Sbjct: 92 WPRRVNIW 99
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 VNWARRSSLW 10
+ W+ R LW
Sbjct: 439 IYWSPRPGLW 448
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 VNWARRSSLW 10
+ W+ R LW
Sbjct: 439 IYWSPRPGLW 448
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 VNWARRSSLW 10
+ W+ R LW
Sbjct: 439 IYWSPRPGLW 448
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 VNWARRSSLW 10
+ W+ R LW
Sbjct: 439 IYWSPRPGLW 448
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 VNWARRSSLW 10
+ W+ R LW
Sbjct: 439 IYWSPRPGLW 448
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 VNWARRSSLW 10
+ W+ R LW
Sbjct: 439 IYWSPRPGLW 448
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 3 WARRSSLW 10
W RR+ W
Sbjct: 5 WGRRNKFW 12
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 NWARRSSLW 10
+W R S W
Sbjct: 172 DWKRISDFW 180
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 NWARRSSLW 10
+W R S W
Sbjct: 172 DWKRISDFW 180
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 NWARRSSLW 10
+W R S W
Sbjct: 120 DWMARPSTW 128
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 NWARRSSLW 10
+W R S W
Sbjct: 120 DWMARPSTW 128
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 NWARRSSLW 10
+W R S W
Sbjct: 120 DWMARPSTW 128
>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VNWARRSSLW 10
V W R S +W
Sbjct: 294 VPWIRESKMW 303
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VNWARRSSLW 10
V W R S +W
Sbjct: 296 VPWIRESKMW 305
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 VNWARRSS 8
V WAR+ S
Sbjct: 746 VEWARKFS 753
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NWARRS 7
NW RR+
Sbjct: 179 NWRRRT 184
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NWARRS 7
NW RR+
Sbjct: 179 NWRRRT 184
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 WARRSSLW 10
W R S W
Sbjct: 233 WHSRGSTW 240
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 WARRSSLW 10
W R S W
Sbjct: 233 WHSRGSTW 240
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WARRSSLW 10
W R S W
Sbjct: 233 WHSRGSTW 240
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 2 NWARRSSLW 10
NW R S W
Sbjct: 6 NWEGRCSGW 14
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 VNWARRSSLW 10
++W SS W
Sbjct: 656 IDWTYMSSTW 665
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 WARRSSLW 10
W R +LW
Sbjct: 1018 WPRSHTLW 1025
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 NWARRSSLW 10
NW + LW
Sbjct: 1759 NWQKLEVLW 1767
16|Sequence|76|85|RSSLWPMTFG
>sp|NEF_HV1Y2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 WPMTFG 10
WP+TFG
Sbjct: 144 WPLTFG 149
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 4 LWPMTF 9
LWP+TF
Sbjct: 443 LWPVTF 448
>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3
Query: 4 LWPMTF 9
LWP+TF
Sbjct: 446 LWPVTF 451
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 4 LWPMTF 9
LWP+TF
Sbjct: 446 LWPVTF 451
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 2 SSLWPMTFG 10
+ +W TFG
Sbjct: 144 TQMWSYTFG 152
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 2 SSLWPMTFG 10
+ +W TFG
Sbjct: 147 AQMWNFTFG 155
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 2 SSLWPMTFG 10
+ +W TFG
Sbjct: 147 AQMWNFTFG 155
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SSLWPMTFG 10
+ +W TFG
Sbjct: 147 AQMWNFTFG 155
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 3 SLWPM 7
S WPM
Sbjct: 629 SFWPM 633
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 3 SLWPM 7
S WPM
Sbjct: 629 SFWPM 633
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 5 WPMTFG 10
WP FG
Sbjct: 1372 WPDAFG 1377
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 SLWPMT 8
S+WP T
Sbjct: 218 SMWPRT 223
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 SSLWPMT 8
+S WP+T
Sbjct: 1275 ASRWPIT 1281
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 SSLWPMT 8
+S WP+T
Sbjct: 1274 ASRWPIT 1280
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 SSLWPMT 8
+S WP+T
Sbjct: 1273 ASRWPIT 1279
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 SSLWPMT 8
+S WP+T
Sbjct: 1275 ASRWPIT 1281
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 SSLWPMT 8
+S WP+T
Sbjct: 1275 ASRWPIT 1281
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 SSLWPMT 8
+S WP+T
Sbjct: 1276 ASRWPIT 1282
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 SSLWPMT 8
+S WP+T
Sbjct: 1276 ASRWPIT 1282
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 SSLWPMT 8
+S WP+T
Sbjct: 1274 ASRWPIT 1280
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 SSLWPMT 8
+S WP+T
Sbjct: 1274 ASRWPIT 1280
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 SSLWPMT 8
+S WP+T
Sbjct: 1274 ASRWPIT 1280
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 SSLWPMT 8
+S WP+T
Sbjct: 1273 ASRWPIT 1279
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 SSLWPMT 8
+S WP+T
Sbjct: 1275 ASRWPIT 1281
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 WPMTFG 10
+P+TFG
Sbjct: 132 YPLTFG 137
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 WPMTFG 10
+P+TFG
Sbjct: 137 YPLTFG 142
17|Sequence|81|90|PMTFGLACCA
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 PMTFGLACCA 10
P+T GL CCA
Sbjct: 742 PLTLGLLCCA 751
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 PMTFGLACCA 10
P+T G+ CCA
Sbjct: 740 PVTLGVLCCA 749
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 PMTFGLACCA 10
P+T G+ CCA
Sbjct: 740 PVTLGVLCCA 749
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 PMTFGLACCA 10
P+T G+ CCA
Sbjct: 732 PVTIGVLCCA 741
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 PMTFGLACCA 10
P T G+ CCA
Sbjct: 741 PWTLGILCCA 750
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 PMTFGLACCA 10
P T G+ CCA
Sbjct: 741 PWTLGILCCA 750
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 1 PMTFGLAC 8
P+ FGL C
Sbjct: 176 PLAFGLRC 183
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 1 PMTFGLACCA 10
P+T GL CA
Sbjct: 408 PLTLGLXXCA 417
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PMTFGLAC 8
P+ FGL C
Sbjct: 158 PVAFGLRC 165
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PMTFGLAC 8
P+ FGL C
Sbjct: 158 PVAFGLRC 165
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PMTFGLAC 8
P+ FGL C
Sbjct: 158 PVAFGLRC 165
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 PMTFGLACCA 10
P+T GL CA
Sbjct: 742 PLTLGLLXCA 751
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 TFGLACCA 10
T GLA C+
Sbjct: 3284 TLGLAICS 3291
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 TFGLACCA 10
T GLA C+
Sbjct: 3288 TLGLAICS 3295
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 TFGLACCA 10
T GLA C+
Sbjct: 3288 TLGLAICS 3295
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 1 PMTFGLACC 9
P+ + ACC
Sbjct: 439 PLEYKDACC 447
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MTFGLAC 8
MT G+ C
Sbjct: 2174 MTLGMCC 2180
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MTFGLAC 8
MT G+ C
Sbjct: 2171 MTLGMCC 2177
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MTFGLAC 8
MT G+ C
Sbjct: 2174 MTLGMCC 2180
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MTFGLAC 8
MT G+ C
Sbjct: 2174 MTLGMCC 2180
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 MTFGLAC 8
MT G+ C
Sbjct: 2174 MTLGMCC 2180
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MTFGLAC 8
MT G+ C
Sbjct: 2174 MTLGMCC 2180
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MTFGLAC 8
MT G+ C
Sbjct: 2174 MTLGMCC 2180
>sp|IORF_CVHOC|PROTEIN I|Human coronavirus OC43 (HCoV-OC43)
Query: 1 PMTFGLACC 9
PM + CC
Sbjct: 92 PMATSVNCC 100
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 MTFGLACC 9
+TFG A C
Sbjct: 781 LTFGSASC 788
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 MTFGLACC 9
+TFG A C
Sbjct: 781 LTFGSASC 788
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 MTFGLACC 9
+TFG A C
Sbjct: 781 LTFGSASC 788
>sp|UL40_HCMVA|PROTEIN UL40|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PMTFGLACCA 10
P TFGL A
Sbjct: 175 PATFGLETWA 184
18|Sequence|86|95|LACCAVEMMH
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 1 LACCAVEMMH 10
L C +EM+H
Sbjct: 603 LVACTIEMVH 612
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 2 ACCAVEM 8
AC A+EM
Sbjct: 69 ACSAIEM 75
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 LACCA 5
LACCA
Sbjct: 1046 LACCA 1050
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 LACCA 5
LACCA
Sbjct: 1046 LACCA 1050
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 LACCAVEMMH 10
+AC + M H
Sbjct: 568 MACVTMNMQH 577
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 LACCAVEMMH 10
+AC + M H
Sbjct: 568 MACVTMNMQH 577
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 LACCAVEMM 9
L CC V+ +
Sbjct: 1002 LKCCVVDAL 1010
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 LACCAVEMM 9
L CC V+ +
Sbjct: 1002 LKCCVVDAL 1010
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 LACCAVEMMH 10
+AC + M H
Sbjct: 568 MACITMNMQH 577
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 LACCAVEMMH 10
+AC + M H
Sbjct: 568 MACITMNMQH 577
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 LACCAVEMMH 10
+AC + M H
Sbjct: 568 MACITMNMQH 577
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 LACCAVEMMH 10
+AC + M H
Sbjct: 557 MACITMNMQH 566
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 LACCAVEMMH 10
+AC + M H
Sbjct: 574 MACITMNMQH 583
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 LACCAVEMMH 10
+AC + M H
Sbjct: 557 MACITMNMQH 566
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 LACCAVEMMH 10
+AC + M H
Sbjct: 570 MACITMNMQH 579
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 LACCAVEMMH 10
+AC + M H
Sbjct: 557 MACITMNMQH 566
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 LACCAVEMMH 10
+AC + M H
Sbjct: 558 MACITMNMQH 567
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 LACCAVEMMH 10
+AC + M H
Sbjct: 558 MACITMNMQH 567
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 LACCAVEMMH 10
+AC + M H
Sbjct: 565 MACITMNMQH 574
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 1 LACCAVEMMH 10
+AC + M H
Sbjct: 558 MACITMNMQH 567
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 LACCAVEMM 9
L CC V+ +
Sbjct: 1002 LKCCVVDSL 1010
>sp|GL_HHV8P|ENVELOPE glycoprotein L|Human herpesvirus 8 type P
Query: 1 LACCAVE 7
L CCA++
Sbjct: 24 LPCCAIQ 30
>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51
Query: 2 ACCAVEM 8
AC A+EM
Sbjct: 69 ACQAIEM 75
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LACCAVEMMH 10
+A C V M H
Sbjct: 631 VARCIVNMFH 640
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LACCAVEMMH 10
+A C V M H
Sbjct: 631 VARCIVNMFH 640
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 2 ACCAVEMMH 10
A C V M H
Sbjct: 46 AICTVRMQH 54
19|Sequence|91|100|VEMMHMAAPR
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 EMMHMAAPR 10
E MH+ PR
Sbjct: 2157 EYMHLTLPR 2165
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 EMMHMAAPR 10
+ +HM PR
Sbjct: 1215 KFLHMVLPR 1223
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 EMMHMAAPR 10
+ +HM PR
Sbjct: 1215 KFLHMVLPR 1223
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 1 VEMMHMAAP 9
V +MH A+P
Sbjct: 237 VGVMHFASP 245
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 1 VEMMHMAAP 9
V +MH A+P
Sbjct: 234 VGVMHFASP 242
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 VEMMHMAAP 9
V +MH A+P
Sbjct: 234 VGVMHFASP 242
20|Sequence|96|105|MAAPRYDMDR
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 PRYDMD 9
P YDMD
Sbjct: 206 PAYDMD 211
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PRYDMD 9
P YDMD
Sbjct: 206 PAYDMD 211
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 4 PRYDMD 9
P YDMD
Sbjct: 226 PAYDMD 231
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 4 PRYDMD 9
P YDMD
Sbjct: 226 PAYDMD 231
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 2 AAPRYDMDR 10
APRY + R
Sbjct: 104 GAPRYHLTR 112
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 AAPRYDMDR 10
APRY + R
Sbjct: 104 GAPRYHLTR 112
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 1 MAAPRYDMD 9
++AP YD D
Sbjct: 22 VSAPPYDDD 30
21|Sequence|101|110|YDMDRFGVVF
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 YDMDRFGVVF 10
+D DR GVV
Sbjct: 1304 HDQDRLGVVL 1313
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 MDRFGVVF 10
+D+FGVV+
Sbjct: 295 LDKFGVVY 302
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 MDRFGVVF 10
+D+FGVV+
Sbjct: 295 LDKFGVVY 302
>sp|NEF_HV1U4|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DMDRFGVV 9
D+D++G V
Sbjct: 36 DLDKYGAV 43
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DMDRFGV 8
++DRFG+
Sbjct: 40 ELDRFGL 46
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DMDRFGV 8
++DRFG+
Sbjct: 40 ELDRFGL 46
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DMDRFGV 8
++DRFG+
Sbjct: 40 ELDRFGL 46
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DMDRFGV 8
++DRFG+
Sbjct: 40 ELDRFGL 46
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DMDRFGV 8
++DRFG+
Sbjct: 40 ELDRFGL 46
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DMDRFGV 8
++DRFG+
Sbjct: 40 ELDRFGL 46
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DMDRFGV 8
++DRFG+
Sbjct: 40 ELDRFGL 46
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 DMDRFGV 8
++DRFG+
Sbjct: 40 ELDRFGL 46
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 DMDRFGV 8
++DRFG+
Sbjct: 40 ELDRFGL 46
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 DMDRFGV 8
++DRFG+
Sbjct: 40 ELDRFGL 46
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 DMDRFGV 8
++DRFG+
Sbjct: 40 ELDRFGL 46
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 DMDRFGV 8
++DRFG+
Sbjct: 40 ELDRFGL 46
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 DMDRFGV 8
++DRFG+
Sbjct: 40 ELDRFGL 46
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 DMDRFGV 8
++DRFG+
Sbjct: 40 ELDRFGL 46
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 YDMDRF 6
+DM+RF
Sbjct: 702 FDMERF 707
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 YDMDRF 6
+DM+RF
Sbjct: 702 FDMERF 707
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 YDMDRFGVV 9
YD RF V+
Sbjct: 1488 YDKGRFNVI 1496
>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain
Query: 1 YDMDRFGVVF 10
Y+M FG F
Sbjct: 29 YEMTSFGTSF 38
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 YDMDRFGVVF 10
+D D +GV +
Sbjct: 2870 FDFDIYGVTY 2879
>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate
Query: 1 YDMDRFGVVF 10
Y+M FG F
Sbjct: 29 YEMTSFGASF 38
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 MDRFGVV 9
+DR+G+V
Sbjct: 186 LDRYGIV 192
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 3 MDRFGVV 9
+DR+G+V
Sbjct: 186 LDRYGIV 192
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 DMDRFGVVF 10
D D +GV +
Sbjct: 2869 DFDMYGVTY 2877
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 DMDRFGVVF 10
D D +GV +
Sbjct: 2866 DFDMYGVTY 2874
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 DMDRFGVVF 10
D D +GV +
Sbjct: 2875 DFDMYGVTY 2883
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 DMDRFGVVF 10
D D +GV +
Sbjct: 2861 DFDMYGVTY 2869
>sp|UL79_HHV6U|PROTEIN U52|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 MDRFGV 8
MD FGV
Sbjct: 130 MDEFGV 135
22|Sequence|106|115|FGVVFRASPR
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 2 GVVFRASP 9
G+V +ASP
Sbjct: 80 GLVIKASP 87
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 1 FGVVFRASP 9
FGV+ ASP
Sbjct: 392 FGVIPVASP 400
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 1 FGVVFRASP 9
FGV+ ASP
Sbjct: 393 FGVIPVASP 401
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 GVVFRASPR 10
GVV SPR
Sbjct: 2438 GVVITRSPR 2446
23|Sequence|111|120|RASPRQSDVM
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 RASPRQS 7
RA PRQS
Sbjct: 711 RAGPRQS 717
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 2 ASPRQSDV 9
A+P QSDV
Sbjct: 464 AAPAQSDV 471
24|Sequence|116|125|QSDVMIVAGT
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 QSDVMIVA 8
Q DV++VA
Sbjct: 1433 QGDVVVVA 1440
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 QSDVMIVA 8
Q DV++VA
Sbjct: 1433 QGDVVVVA 1440
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 QSDVMIVA 8
Q DV++VA
Sbjct: 1433 QGDVVVVA 1440
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 QSDVMIVA 8
Q DV++VA
Sbjct: 1433 QGDVVVVA 1440
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 QSDVMIVA 8
Q DV++VA
Sbjct: 1433 QGDVVVVA 1440
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 QSDVMIVA 8
Q DV++VA
Sbjct: 1433 QGDVVVVA 1440
25|Sequence|121|130|IVAGTLTNKM
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 IVAGTLTNKM 10
+VA T+ N+M
Sbjct: 2237 VVAATMANEM 2246
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 IVAGTLTNKM 10
+VA T+ N+M
Sbjct: 2237 VVAATMANEM 2246
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 IVAGTLTNKM 10
+VA T+ N+M
Sbjct: 2234 VVAATMANEM 2243
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 IVAGTLTNKM 10
+VA T+ N+M
Sbjct: 2237 VVAATMANEM 2246
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 IVAGTLTNKM 10
+VA T+ N+M
Sbjct: 2237 VVAATMANEM 2246
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 IVAGTLTNKM 10
+VA T+ N+M
Sbjct: 2237 VVAATMANEM 2246
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 IVAGTLTNKM 10
+VA T+ N+M
Sbjct: 2237 VVAATMANEM 2246
26|Sequence|126|135|LTNKMAPALR
***** No hits found ******
27|Sequence|131|140|APALRKVYDQ
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 APALRKV 7
+PALRK+
Sbjct: 592 SPALRKI 598
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 3 ALRKVYD 9
A+R+VYD
Sbjct: 235 AIRRVYD 241
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 3 ALRKVYD 9
A+R+VYD
Sbjct: 235 AIRRVYD 241
>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 2 PALRKVYDQ 10
PA+ +YD+
Sbjct: 257 PAMDPIYDE 265
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 2 PALRKVY 8
P+L KVY
Sbjct: 307 PSLNKVY 313
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 2 PALRKVY 8
P+L KVY
Sbjct: 317 PSLNKVY 323
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 2 PALRKVY 8
P+L KVY
Sbjct: 317 PSLNKVY 323
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 APALRKVYD 9
AP++RK+ +
Sbjct: 2493 APSIRKILN 2501
>sp|NSP4_ROT41|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate
Query: 4 LRKVYDQ 10
LR++YD+
Sbjct: 127 LRRIYDR 133
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 PALRKVYDQ 10
P+L K+Y++
Sbjct: 863 PSLLKLYEE 871
28|Sequence|136|145|KVYDQMPEPR
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 KVYDQMPEP 9
KVY Q+P+P
Sbjct: 834 KVYKQIPQP 842
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 KVYDQMPEP 9
KVY Q+P+P
Sbjct: 836 KVYKQVPQP 844
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 KVYDQMPEP 9
KVY Q+P+P
Sbjct: 834 KVYKQVPQP 842
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 KVYDQMPEP 9
KVY Q+P+P
Sbjct: 834 KVYKQVPQP 842
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 KVYDQMPEP 9
KVY Q+P+P
Sbjct: 834 KVYKQVPQP 842
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 KVYDQMPEP 9
KVY Q+P+P
Sbjct: 834 KVYKQVPQP 842
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 KVYDQMPEP 9
KVY Q+P+P
Sbjct: 840 KVYKQVPQP 848
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KVYDQMPEPR 10
K+Y Q P P+
Sbjct: 51 KLYGQFPSPK 60
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 KVYDQMPEPR 10
K+Y Q P P+
Sbjct: 51 KLYGQFPSPK 60
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 2 VYDQMPEP 9
+YDQ EP
Sbjct: 72 IYDQCTEP 79
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 KVYDQMPEPR 10
K Y + PE R
Sbjct: 71 KYYQEEPEAR 80
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 YDQMPEP 9
+ +MPEP
Sbjct: 1399 FSKMPEP 1405
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 KVYDQMPE 8
KVY Q+P+
Sbjct: 831 KVYKQVPQ 838
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 KVYDQMPE 8
KVY Q+P+
Sbjct: 823 KVYKQVPQ 830
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 KVYDQMPE 8
KVY Q+P+
Sbjct: 824 KVYKQVPQ 831
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 KVYDQMPE 8
KVY Q+P+
Sbjct: 823 KVYKQVPQ 830
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 1 KVYDQMPE 8
KVY Q+P+
Sbjct: 824 KVYKQVPQ 831
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 KVYDQMPE 8
KVY Q+P+
Sbjct: 823 KVYKQVPQ 830
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 KVYDQMPE 8
KVY Q+P+
Sbjct: 824 KVYKQVPQ 831
29|Sequence|141|150|MPEPRYVVSM
>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 MPEPRYVVSM 10
MP PRY+ M
Sbjct: 79 MPAPRYLTDM 88
>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 MPEPRYVVSM 10
MP PRY+ M
Sbjct: 79 MPAPRYLTDM 88
>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 PEPRYVVSM 10
P PRY+ M
Sbjct: 85 PAPRYITDM 93
>sp|NS1_I97A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 MPEPRYVVSM 10
+P PRY+ M
Sbjct: 84 VPAPRYLAEM 93
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 2 PEPRYVVSM 10
P PRY+ M
Sbjct: 85 PAPRYITDM 93
>sp|NS1_I97A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 MPEPRYVVSM 10
+P PRY+ M
Sbjct: 84 VPAPRYLTEM 93
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 MPEPRYVVS 9
MP P+Y S
Sbjct: 413 MPNPKYTTS 421
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 MPEPRYVVS 9
MP P+Y S
Sbjct: 413 MPNPKYTTS 421
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 MPEPRYVVS 9
MP P+Y S
Sbjct: 413 MPNPKYTTS 421
>sp|NS1_I05A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 MPEPRYVVSM 10
MP RY+ M
Sbjct: 75 MPASRYLTDM 84
>sp|NS1_I02A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 MPEPRYVVSM 10
MP RY+ M
Sbjct: 79 MPASRYLTDM 88
>sp|NS1_I02A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 MPEPRYVVSM 10
MP RY+ M
Sbjct: 79 MPASRYLTDM 88
>sp|NS1_I03A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 MPEPRYVVSM 10
MP RY+ M
Sbjct: 79 MPASRYLTDM 88
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 1 MPEPRYVV 8
MP P Y V
Sbjct: 212 MPSPFYTV 219
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 MPEPRYVVSM 10
MP RY+ M
Sbjct: 79 MPASRYLTDM 88
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 2 PEPRYV 7
P PRY+
Sbjct: 594 PAPRYI 599
>sp|NS1_I03A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 MPEPRYVVSM 10
MP RY+ M
Sbjct: 79 MPASRYLTDM 88
>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 1 MPEPRYVVSM 10
MP RY+ M
Sbjct: 79 MPASRYLTDM 88
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 1 MPEPRYVVSM 10
MP RY+ M
Sbjct: 79 MPASRYLTDM 88
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 EPRYVVS 9
EP YVVS
Sbjct: 34 EPLYVVS 40
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 EPRYVVS 9
EP YVVS
Sbjct: 34 EPLYVVS 40
>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 MPEPRYVVSM 10
MP RY+ M
Sbjct: 62 MPASRYLTDM 71
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 EPRYVVSM 10
+PRYV+ +
Sbjct: 303 DPRYVMRL 310
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 EPRYVVSM 10
+PRYV+ +
Sbjct: 303 DPRYVMRL 310
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 PEPRYV 7
P PRY+
Sbjct: 591 PPPRYI 596
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 PEPRYV 7
P PRY+
Sbjct: 591 PPPRYI 596
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 3 EPRYVV 8
+PRY+V
Sbjct: 698 KPRYIV 703
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 2 PEPRYV 7
P PRY+
Sbjct: 592 PPPRYI 597
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 1 MPEPRYV 7
MP P YV
Sbjct: 33 MPPPEYV 39
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PEPRYV 7
P PRY+
Sbjct: 592 PPPRYI 597
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PEPRYV 7
P PRY+
Sbjct: 592 PPPRYI 597
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PEPRYV 7
PE RYV
Sbjct: 750 PEKRYV 755
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 MPEPRYVV 8
+P P YVV
Sbjct: 2376 IPAPDYVV 2383
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 MPEPRYVVSM 10
+PEP Y ++
Sbjct: 2074 IPEPNYTRAL 2083
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 MPEPRYVV 8
+P P YVV
Sbjct: 2376 IPAPDYVV 2383
30|Sequence|146|155|YVVSMGSCAN
>sp|SLFN_VACCC|SCHLAFEN-LIKE protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YVVSMGSC 8
Y+ +MGSC
Sbjct: 48 YMKTMGSC 55
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 1 YVVSMGSCAN 10
YVV+ C N
Sbjct: 21 YVVTEAECIN 30
>sp|CEP1_HHV2H|CYTOPLASMIC envelopment protein 1|Human herpesvirus 2 (strain HG52)
Query: 5 MGSCAN 10
MGSC N
Sbjct: 262 MGSCWN 267
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 YVVSMGSCAN 10
Y+V CA+
Sbjct: 1803 YIVKQSECAS 1812
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 YVVSMGSCAN 10
Y+V CA+
Sbjct: 1800 YIVKQSDCAS 1809
31|Sequence|151|160|GSCANGGGYY
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 NGGGYY 10
NGGGYY
Sbjct: 95 NGGGYY 100
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 NGGGYY 10
NGGGYY
Sbjct: 95 NGGGYY 100
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 NGGGYY 10
NGGGYY
Sbjct: 95 NGGGYY 100
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 NGGGYY 10
NGGGYY
Sbjct: 95 NGGGYY 100
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 NGGGYY 10
NGGGYY
Sbjct: 95 NGGGYY 100
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 NGGGYY 10
NGGGYY
Sbjct: 95 NGGGYY 100
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 GSCANGGGYY 10
GS A+G GY+
Sbjct: 138 GSAASGDGYH 147
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GSCANGGGYY 10
GS A+G GY+
Sbjct: 138 GSAASGDGYH 147
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GSCANGGGYY 10
GS A+G GY+
Sbjct: 138 GSAASGDGYH 147
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 3 CANGGGY 9
C NGG Y
Sbjct: 419 CGNGGEY 425
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 GSCANGGGY 9
G C++ GGY
Sbjct: 605 GFCSDCGGY 613
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 4 ANGGGY 9
+NGGGY
Sbjct: 325 SNGGGY 330
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 GSCANGGGY 9
G C + GGY
Sbjct: 605 GYCTDCGGY 613
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 GSCANGGGY 9
G C + GGY
Sbjct: 605 GYCTDCGGY 613
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 CANGGG 8
CA GGG
Sbjct: 1631 CAGGGG 1636
>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 GSCANG 6
G CANG
Sbjct: 73 GQCANG 78
>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GSCANG 6
G CANG
Sbjct: 73 GQCANG 78
>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GSCANG 6
G CANG
Sbjct: 73 GQCANG 78
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 SCANGGGYY 10
S GGG+Y
Sbjct: 3031 SAKEGGGFY 3039
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 GSCANGGGY 9
G C + GGY
Sbjct: 605 GFCTDCGGY 613
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 4 ANGGGYY 10
A GG YY
Sbjct: 434 AQGGNYY 440
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 SCANGGGYY 10
S GGG+Y
Sbjct: 3031 STKEGGGFY 3039
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 SCANGGGYY 10
S GGG+Y
Sbjct: 3031 STKEGGGFY 3039
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 GSCANGG 7
GSC N G
Sbjct: 652 GSCGNSG 658
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 1 GSC---ANGGGYY 10
GSC ANG G++
Sbjct: 156 GSCPNVANGNGFF 168
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 5 NGGGYY 10
+GGG+Y
Sbjct: 3033 DGGGFY 3038
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 NGGGYY 10
+GGG+Y
Sbjct: 3033 DGGGFY 3038
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 5 NGGGYY 10
+GGG+Y
Sbjct: 3033 DGGGFY 3038
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 5 NGGGYY 10
+GGG+Y
Sbjct: 3033 DGGGFY 3038
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 NGGGYY 10
+GGG+Y
Sbjct: 3033 DGGGFY 3038
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 ANGGGY 9
A GGGY
Sbjct: 980 AGGGGY 985
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 CANGGG 8
C++GGG
Sbjct: 156 CSSGGG 161
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 CANGGG 8
CA GGG
Sbjct: 1276 CAVGGG 1281
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 CANGGG 8
CA GGG
Sbjct: 1276 CAVGGG 1281
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 CANGGG 8
CA GGG
Sbjct: 1276 CAVGGG 1281
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 CANGGG 8
CA GGG
Sbjct: 1276 CAVGGG 1281
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 CANGGG 8
CA GGG
Sbjct: 1276 CAVGGG 1281
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 CANGGG 8
CA GGG
Sbjct: 1276 CAVGGG 1281
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 CANGGG 8
CA GGG
Sbjct: 1276 CAVGGG 1281
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 CANGGG 8
CA GGG
Sbjct: 1276 CAVGGG 1281
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 1 GSCANGG 7
G C NGG
Sbjct: 74 GYCYNGG 80
>sp|VE7_HPV47|PROTEIN E7|Human papillomavirus 47
Query: 1 GSCANGG 7
G+C +GG
Sbjct: 96 GNCKHGG 102
>sp|VE7_HPV25|PROTEIN E7|Human papillomavirus 25
Query: 1 GSCANGG 7
G+C +GG
Sbjct: 95 GNCKHGG 101
>sp|VE7_HPV21|PROTEIN E7|Human papillomavirus 21
Query: 1 GSCANGG 7
G+C +GG
Sbjct: 94 GNCKHGG 100
>sp|VE7_HPV20|PROTEIN E7|Human papillomavirus 20
Query: 1 GSCANGG 7
G+C +GG
Sbjct: 95 GNCKHGG 101
>sp|VE7_HPV12|PROTEIN E7|Human papillomavirus 12
Query: 1 GSCANGG 7
G+C +GG
Sbjct: 96 GNCKHGG 102
>sp|VE7_HPV08|PROTEIN E7|Human papillomavirus type 8
Query: 1 GSCANGG 7
G+C +GG
Sbjct: 96 GNCKHGG 102
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 CANGGG 8
CA GGG
Sbjct: 1276 CAVGGG 1281
>sp|NEF_HV2G1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 4 ANGGGY 9
A+GGGY
Sbjct: 23 AHGGGY 28
>sp|VE7_HPV36|PROTEIN E7|Human papillomavirus 36
Query: 1 GSCANGG 7
G+C +GG
Sbjct: 95 GNCEHGG 101
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 GSCANGGGYY 10
G C +G YY
Sbjct: 1811 GYCVHGIKYY 1820
>sp|VE7_HPV19|PROTEIN E7|Human papillomavirus 19
Query: 1 GSCANGG 7
G+C +GG
Sbjct: 95 GNCNHGG 101
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GSCANGGGYY 10
G C +G YY
Sbjct: 1811 GYCVHGIKYY 1820
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 5 NGGGY 9
NGGG+
Sbjct: 646 NGGGF 650
>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 4 ANGGGY 9
A GGGY
Sbjct: 23 ARGGGY 28
32|Sequence|156|165|GGGYYHYSYS
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 GGGYYHYSYS 10
GGGYY SYS
Sbjct: 96 GGGYYSASYS 105
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 GGGYYHYSYS 10
GGGYY SYS
Sbjct: 96 GGGYYSASYS 105
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 GGGYYHYSYS 10
GGGYY SYS
Sbjct: 96 GGGYYSASYS 105
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 GGGYYHYSYS 10
GGGYY SYS
Sbjct: 96 GGGYYSASYS 105
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 GGGYYHYSYS 10
GGGYY SYS
Sbjct: 96 GGGYYSASYS 105
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 GGGYYHYSYS 10
GGGYY SYS
Sbjct: 96 GGGYYSASYS 105
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 GGGYYHYSYS 10
G GYY SYS
Sbjct: 96 GLGYYSASYS 105
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 GGGYYHYSYS 10
G GYY SYS
Sbjct: 94 GLGYYSASYS 103
>sp|VE6_HPV58|PROTEIN E6|Human papillomavirus 58
Query: 4 YYHYSYS 10
Y HY+YS
Sbjct: 76 YRHYNYS 82
>sp|VE6_HPV33|PROTEIN E6|Human papillomavirus 33
Query: 4 YYHYSYS 10
Y HY+YS
Sbjct: 76 YRHYNYS 82
>sp|VE6_HPV52|PROTEIN E6|Human papillomavirus 52
Query: 4 YYHYSYS 10
Y HY YS
Sbjct: 76 YRHYQYS 82
>sp|VE6_HPV16|PROTEIN E6|Human papillomavirus type 16
Query: 4 YYHYSYS 10
Y HY YS
Sbjct: 83 YRHYCYS 89
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 GGGYYHY 7
G GYY Y
Sbjct: 1248 GTGYYKY 1254
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GGGYYHY 7
G GYY Y
Sbjct: 1248 GTGYYKY 1254
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 YHYSYS 10
Y YSYS
Sbjct: 300 YQYSYS 305
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 5 YHYSYS 10
Y YSYS
Sbjct: 300 YQYSYS 305
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GGGYYHY 7
G GYY Y
Sbjct: 1248 GTGYYKY 1254
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 GGGYYHYSYS 10
G GYY SY+
Sbjct: 92 GLGYYSPSYN 101
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GGGYY 5
GGGYY
Sbjct: 5048 GGGYY 5052
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 GGGYYHY 7
G GYY Y
Sbjct: 1248 GTGYYKY 1254
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 GGGYYHY 7
G GYY Y
Sbjct: 1248 GTGYYKY 1254
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 YHYSYS 10
Y YSYS
Sbjct: 300 YQYSYS 305
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 1 GGGYYHYSY 9
GG YY + Y
Sbjct: 436 GGNYYLWPY 444
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 2 GGYYHYSYS 10
GG YH Y+
Sbjct: 95 GGLYHALYN 103
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 GGYYHYSYS 10
G Y HYS++
Sbjct: 29 GLYSHYSHN 37
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 GGYYHYSYS 10
G Y HYS++
Sbjct: 29 GLYSHYSHN 37
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 GGGYYHYSYS 10
GG YY + Y+
Sbjct: 438 GGDYYLWPYT 447
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 GGYYHYSYS 10
G Y HYS++
Sbjct: 29 GLYSHYSHN 37
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 GGYYHYSYS 10
G Y HYS++
Sbjct: 29 GLYSHYSHN 37
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 GGYYHYSYS 10
G Y HYS++
Sbjct: 29 GLYSHYSHN 37
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 GGYYHY 7
GG YH+
Sbjct: 628 GGVYHF 633
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 GGYYHY 7
GG YH+
Sbjct: 628 GGVYHF 633
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 GGYYHY 7
GG YH+
Sbjct: 628 GGVYHF 633
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 4 YYHY 7
YYHY
Sbjct: 166 YYHY 169
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 4 YYHY 7
YYHY
Sbjct: 166 YYHY 169
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 4 YYHYSY 9
Y HY+Y
Sbjct: 286 YEHYTY 291
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GGYYHY 7
G Y+HY
Sbjct: 282 GTYHHY 287
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GGYYHY 7
G Y+HY
Sbjct: 282 GTYHHY 287
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 YYHYSY 9
Y HY+Y
Sbjct: 286 YEHYTY 291
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 4 YYHY 7
YYHY
Sbjct: 166 YYHY 169
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 4 YYHY 7
YYHY
Sbjct: 166 YYHY 169
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 4 YYHY 7
YYHY
Sbjct: 166 YYHY 169
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 4 YYHY 7
YYHY
Sbjct: 166 YYHY 169
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 4 YYHY 7
YYHY
Sbjct: 166 YYHY 169
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 YYHY 7
YYHY
Sbjct: 166 YYHY 169
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 4 YYHYSYS 10
YY Y+YS
Sbjct: 619 YYRYNYS 625
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 GGYYHYSY 9
GG Y+Y Y
Sbjct: 446 GGNYNYLY 453
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 4 YYHY 7
YYHY
Sbjct: 166 YYHY 169
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 4 YYHYSYS 10
YY Y+YS
Sbjct: 619 YYRYNYS 625
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 4 YYHYSYS 10
YY Y+YS
Sbjct: 619 YYRYNYS 625
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 3 GYYHYSY 9
GY+ YS+
Sbjct: 227 GYFAYSH 233
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 4 YYHY 7
YYHY
Sbjct: 166 YYHY 169
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GYYHYS 8
GY H+S
Sbjct: 332 GYLHFS 337
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GYYHYS 8
GY H+S
Sbjct: 332 GYLHFS 337
>sp|VME1_CVHNL|MEMBRANE protein|Human coronavirus NL63 (HCoV-NL63)
Query: 4 YYHYSYS 10
Y HY YS
Sbjct: 35 YGHYKYS 41
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 4 YYHYSYS 10
YY Y+YS
Sbjct: 619 YYRYNYS 625
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 4 YYHYSYS 10
+Y YS+S
Sbjct: 273 FYFYSFS 279
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 YYHYSYS 10
+Y YS+S
Sbjct: 273 FYFYSFS 279
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 4 YYHYSYS 10
YY Y+YS
Sbjct: 619 YYRYNYS 625
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 4 YYHYSYS 10
YY Y+YS
Sbjct: 619 YYRYNYS 625
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GGGYYHYSYS 10
G Y +SYS
Sbjct: 1484 AGSYRDWSYS 1493
>sp|PG159_MONPV|PROTEIN OPG159|Monkeypox virus (MPXV)
Query: 1 GGGYYH 6
GGG YH
Sbjct: 53 GGGIYH 58
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 4 YYHYSYS 10
YY Y+YS
Sbjct: 619 YYRYNYS 625
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GGGYYHYSYS 10
G Y +SYS
Sbjct: 1508 AGSYKDWSYS 1517
>sp|PG159_VACCC|PROTEIN OPG159|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GGGYYH 6
GGG YH
Sbjct: 53 GGGIYH 58
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GGGYYHY 7
GG++H+
Sbjct: 551 AGGWFHW 557
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 YYHYSYS 10
+Y YS+S
Sbjct: 273 FYFYSFS 279
33|Sequence|161|170|HYSYSVVRGC
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 HYSYSVVRGC 10
Y+Y V RGC
Sbjct: 300 QYAYQVKRGC 309
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 3 SYSVVRGC 10
SYSV GC
Sbjct: 25 SYSVCNGC 32
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 1 HYSYSVVRGC 10
HY VVR C
Sbjct: 674 HYWRRVVRVC 683
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 HYSYSVVRG 9
HY +SV+ G
Sbjct: 1640 HYLFSVLMG 1648
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YSYSVVR 8
Y Y VVR
Sbjct: 491 YKYKVVR 497
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YSYSVVR 8
Y Y VVR
Sbjct: 474 YKYKVVR 480
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YSYSVVR 8
Y Y VVR
Sbjct: 492 YKYKVVR 498
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YSYSVVR 8
Y Y VVR
Sbjct: 471 YKYKVVR 477
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YSYSVVR 8
Y Y VVR
Sbjct: 486 YKYKVVR 492
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YSYSVVR 8
Y Y VVR
Sbjct: 481 YKYKVVR 487
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 YSYSVVRGC 10
YSY+ + C
Sbjct: 678 YSYASAKSC 686
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YSYSVVRGC 10
YSY+ + C
Sbjct: 679 YSYASAKSC 687
>sp|VE6_HPV33|PROTEIN E6|Human papillomavirus 33
Query: 1 HYSYSV 6
HY+YSV
Sbjct: 78 HYNYSV 83
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 YSYSVVRGC 10
YSY+ + C
Sbjct: 678 YSYASAKSC 686
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YSYSVVRGC 10
YSY+ + C
Sbjct: 679 YSYASAKSC 687
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 2 YSYSVVRGC 10
YSY+ + C
Sbjct: 679 YSYASAKSC 687
>sp|VE7_HPV60|PROTEIN E7|Human papillomavirus type 60
Query: 1 HYSYSVVRGC 10
HY Y++ C
Sbjct: 41 HYPYTIDTCC 50
34|Sequence|166|175|VVRGCDRIVP
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 VVRGCDRIVP 10
VVR CD +P
Sbjct: 132 VVRACDTSIP 141
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 VVRGCD 6
+VRGCD
Sbjct: 2024 LVRGCD 2029
Query: 4 GCDRI 8
GCDR+
Sbjct: 3162 GCDRL 3166
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 VVRGCD 6
+VRGCD
Sbjct: 2024 LVRGCD 2029
Query: 4 GCDRI 8
GCDR+
Sbjct: 3162 GCDRL 3166
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 VVRGCD 6
+VRGCD
Sbjct: 2024 LVRGCD 2029
Query: 4 GCDRI 8
GCDR+
Sbjct: 3162 GCDRL 3166
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 5 CDRIVP 10
C+RI+P
Sbjct: 569 CNRIIP 574
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 VRGCDRIVP 10
+ C RIVP
Sbjct: 5623 INDCTRIVP 5631
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 CDRIVP 10
C RI+P
Sbjct: 5654 CSRIIP 5659
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 CDRIVP 10
C RI+P
Sbjct: 5631 CSRIIP 5636
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 CDRIVP 10
C RI+P
Sbjct: 5640 CSRIIP 5645
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 5 CDRIV 9
CDRIV
Sbjct: 342 CDRIV 346
>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate
Query: 5 CDRIV 9
CDRIV
Sbjct: 342 CDRIV 346
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 5 CDRIV 9
CDRIV
Sbjct: 342 CDRIV 346
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 CDRIV 9
CDRIV
Sbjct: 342 CDRIV 346
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 5 CDRIV 9
CDRIV
Sbjct: 342 CDRIV 346
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 5 CDRIV 9
CDRIV
Sbjct: 342 CDRIV 346
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 5 CDRIV 9
CDRIV
Sbjct: 342 CDRIV 346
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 5 CDRIV 9
CDRIV
Sbjct: 342 CDRIV 346
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 VRGCDRIVP 10
V C RI+P
Sbjct: 5323 VDKCTRIIP 5331
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 VRGCDRIVP 10
+ C RI+P
Sbjct: 5661 INDCTRIIP 5669
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 VRGCDRIVP 10
+ C RI+P
Sbjct: 5711 INDCTRIIP 5719
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 VRGCDRIVP 10
+ C RI+P
Sbjct: 5681 INDCTRIIP 5689
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 5 CDRIVP 10
C+RI+P
Sbjct: 569 CNRIMP 574
>sp|PG200_MONPV|PROTEIN OPG200|Monkeypox virus (MPXV)
Query: 4 GCDRI 8
GCDR+
Sbjct: 16 GCDRL 20
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 CDRIVP 10
C RI+P
Sbjct: 5301 CTRIIP 5306
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 GCDRI 8
GCDR+
Sbjct: 3161 GCDRL 3165
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 GCDRI 8
GCDR+
Sbjct: 3161 GCDRL 3165
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 GCDRI 8
GCDR+
Sbjct: 3161 GCDRL 3165
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 GCDRI 8
GCDR+
Sbjct: 3161 GCDRL 3165
>sp|PG200_VACCC|PROTEIN OPG200|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GCDRI 8
GCDR+
Sbjct: 16 GCDRL 20
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVRGCDRIV 9
V G DRI+
Sbjct: 829 VAEGTDRII 837
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVRGCDRIV 9
V G DRI+
Sbjct: 808 VAEGTDRII 816
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVRGCDRIV 9
V G DRI+
Sbjct: 798 VAEGTDRII 806
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVRGCDRIV 9
V G DRI+
Sbjct: 825 VAEGTDRII 833
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVRGCDRIV 9
V G DRI+
Sbjct: 816 VAEGTDRII 824
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVRGCDRIV 9
V G DRI+
Sbjct: 814 VAEGTDRII 822
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVRGCDRIV 9
V G DRI+
Sbjct: 813 VAEGTDRII 821
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVRGCDRIV 9
V G DRI+
Sbjct: 831 VAEGTDRII 839
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVRGCDRIV 9
V G DRI+
Sbjct: 816 VAEGTDRII 824
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVRGCDRIV 9
V G DRI+
Sbjct: 814 VAEGTDRII 822
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVRGCDRIV 9
V G DRI+
Sbjct: 822 VAEGTDRII 830
>sp|PG200_VARV|PROTEIN OPG200|Variola virus
Query: 4 GCDRI 8
GCDR+
Sbjct: 16 GCDRL 20
>sp|PG200_VAR67|PROTEIN OPG200|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 GCDRI 8
GCDR+
Sbjct: 16 GCDRL 20
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVRGCDRIV 9
V G DRI+
Sbjct: 817 VAEGTDRII 825
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVRGCDRIV 9
V G DRI+
Sbjct: 809 VAEGTDRII 817
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 CDRIVP 10
CD ++P
Sbjct: 1120 CDNLIP 1125
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RGCDRIVP 10
R C R++P
Sbjct: 91 RACFRVLP 98
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RGCDRIVP 10
R C R++P
Sbjct: 91 RACFRVLP 98
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 1 VVRGCDRIVP 10
+V C+ +VP
Sbjct: 388 LVTNCELVVP 397
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 1 VVRGCDRIVP 10
+V C+ +VP
Sbjct: 388 LVTNCELVVP 397
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 1 VVRGCDRIVP 10
+V C+ +VP
Sbjct: 388 LVTNCELVVP 397
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 1 VVRGCDRIVP 10
+V C+ +VP
Sbjct: 388 LVTNCELVVP 397
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 1 VVRGCDRIVP 10
+V C+ +VP
Sbjct: 388 LVTNCELVVP 397
35|Sequence|171|180|DRIVPVDIYI
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 3 IVPVDIYI 10
+VP D+YI
Sbjct: 296 VVPSDMYI 303
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 3 IVPVDIY 9
IVP+D+Y
Sbjct: 437 IVPIDMY 443
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 2 RIVPVDIYI 10
++VP D Y+
Sbjct: 27 KVVPTDAYV 35
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 4 VPVDIYI 10
VP D+YI
Sbjct: 269 VPTDLYI 275
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 4 VPVDIYI 10
VP D+YI
Sbjct: 272 VPTDLYI 278
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 4 VPVDIYI 10
VP D+YI
Sbjct: 271 VPADLYI 277
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DRIVPVD 7
DRI+P+D
Sbjct: 73 DRIIPID 79
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 1 DRIVPVD 7
DRI+P+D
Sbjct: 73 DRIIPID 79
>sp|NEF_HV2UC|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 RIVPVDI 8
++VPVDI
Sbjct: 158 KLVPVDI 164
>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 RIVPVDI 8
++VPVDI
Sbjct: 176 KLVPVDI 182
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 4 VPVDIY 9
VPVD+Y
Sbjct: 694 VPVDLY 699
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 2 RIVPVDIYI 10
+++P D Y+
Sbjct: 19 KVIPTDAYV 27
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 1 DRIVPVD 7
DR+ PVD
Sbjct: 656 DRVSPVD 662
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 4 VPVDIY 9
VPVD+Y
Sbjct: 692 VPVDLY 697
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 DRIVPVDIYI 10
DRI ++Y+
Sbjct: 176 DRIAAAEVYV 185
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 3 IVPVDIY 9
++P+D+Y
Sbjct: 436 LIPIDMY 442
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 3 IVPVDIY 9
++P+D+Y
Sbjct: 436 LIPIDMY 442
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 3 IVPVDIY 9
++P+D+Y
Sbjct: 436 LIPIDMY 442
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 4 VPVDIYI 10
VP D+YI
Sbjct: 298 VPTDLYI 304
>sp|NEF_HV2ST|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 RIVPVDI 8
++VPVD+
Sbjct: 175 KLVPVDV 181
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 RIVPVDI 8
++VPVD+
Sbjct: 176 KLVPVDV 182
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 RIVPVDI 8
++VPVD+
Sbjct: 176 KLVPVDV 182
>sp|NEF_HV2G1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 RIVPVDI 8
++VPVD+
Sbjct: 175 KLVPVDV 181
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 4 VPVDIYI 10
VPV +YI
Sbjct: 271 VPVSMYI 277
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 4 VPVDIYI 10
VP D+YI
Sbjct: 268 VPEDMYI 274
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 RIVPVDIYI 10
R++ DIYI
Sbjct: 331 RVIDEDIYI 339
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 4 VPVDIYI 10
+P D+YI
Sbjct: 271 IPTDMYI 277
>sp|PG091_VACCC|PROTEIN OPG091|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RIVPVDIY 9
RIVP+D +
Sbjct: 60 RIVPLDSF 67
>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)
Query: 3 IVPVDI 8
+VPVDI
Sbjct: 318 LVPVDI 323
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 2 RIVPVDIYI 10
+ +P D+Y+
Sbjct: 156 KTIPCDVYM 164
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RIVPVDIYI 10
R++ DIYI
Sbjct: 331 RVIDEDIYI 339
36|Sequence|176|185|VDIYIPGCPP
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 4 YIPGCP 9
Y PGCP
Sbjct: 590 YPPGCP 595
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 4 YIPGCP 9
Y PGCP
Sbjct: 590 YPPGCP 595
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 4 YIPGCP 9
Y PGCP
Sbjct: 588 YPPGCP 593
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 4 YIPGCP 9
Y PGCP
Sbjct: 590 YPPGCP 595
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 4 YIPGCP 9
Y PGCP
Sbjct: 590 YPPGCP 595
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 VDIYIPGCPP 10
V IY CPP
Sbjct: 507 VPIYFRECPP 516
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 IYIPGCPP 10
I++PGC P
Sbjct: 221 IHLPGCVP 228
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 3 IYIPGCPP 10
IY+P PP
Sbjct: 11 IYLPPTPP 18
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 3 IYIPGCPP 10
IY+P PP
Sbjct: 11 IYLPPTPP 18
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 1 VDIYIPGC 8
+ IYIP C
Sbjct: 683 IAIYIPRC 690
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DIYIPGCP 9
+IY P CP
Sbjct: 17 EIYPPICP 24
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 4 YIPGCP 9
Y PGCP
Sbjct: 590 YPPGCP 595
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 IYIPGCPP 10
+++PGC P
Sbjct: 221 LHVPGCVP 228
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 3 IYIPGCPP 10
IY+P PP
Sbjct: 11 IYLPPTPP 18
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 3 IYIPGCPP 10
+Y+P PP
Sbjct: 11 VYLPPTPP 18
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 IYIPGCPP 10
+++PGC P
Sbjct: 221 LHVPGCVP 228
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 VDIYIP 6
VD+Y+P
Sbjct: 325 VDVYVP 330
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 3 IYIPGCPP 10
+Y+P PP
Sbjct: 11 VYLPPTPP 18
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 VDIYIPGCPP 10
V +++PGC P
Sbjct: 219 VILHLPGCVP 228
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 3 IYIPGCPP 10
+Y+P PP
Sbjct: 1052 LYLPSTPP 1059
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 IYIPGCPP 10
+++PGC P
Sbjct: 221 LHVPGCVP 228
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 3 IYIPGCPP 10
+Y+P PP
Sbjct: 11 VYLPPTPP 18
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 IYIPGCPP 10
+++PGC P
Sbjct: 221 LHLPGCVP 228
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 IYIPGCPP 10
+++PGC P
Sbjct: 221 LHLPGCVP 228
>sp|PG081_VARV|PROTEIN OPG081|Variola virus
Query: 3 IYIPG 7
IYIPG
Sbjct: 59 IYIPG 63
>sp|PG081_VAR67|PROTEIN OPG081|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 IYIPG 7
IYIPG
Sbjct: 59 IYIPG 63
>sp|PG081_VACCC|PROTEIN OPG081|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 IYIPG 7
IYIPG
Sbjct: 59 IYIPG 63
>sp|GN_HHV6U|ENVELOPE glycoprotein N|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VDIYIPGC 8
VD Y P C
Sbjct: 29 VDFYSPEC 36
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 VDIYIPGCPP 10
V +++PGC P
Sbjct: 219 VILHLPGCIP 228
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 IYIPGCPP 10
+++PGC P
Sbjct: 221 LHLPGCVP 228
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VDIYIP 6
VD+Y+P
Sbjct: 325 VDVYVP 330
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 3 IYIPGCPP 10
+++PGC P
Sbjct: 221 LHVPGCVP 228
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 DIYIPGC 8
D+Y+ GC
Sbjct: 2114 DMYLTGC 2120
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 DIYIPGC 8
D+Y+ GC
Sbjct: 2134 DMYLTGC 2140
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 DIYIPGC 8
D+Y+ GC
Sbjct: 2114 DMYLTGC 2120
Query: 2 DIYIPGCPP 10
+IY GC P
Sbjct: 4884 EIYDGGCIP 4892
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 3 IYIPGC 8
+YIP C
Sbjct: 885 LYIPSC 890
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 DIYIPGC 8
D+Y+ GC
Sbjct: 2164 DMYLTGC 2170
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 DIYIPGC 8
D+Y+ GC
Sbjct: 2164 DMYLTGC 2170
Query: 2 DIYIPGCPP 10
+IY GC P
Sbjct: 4934 EIYDGGCIP 4942
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 DIYIPGC 8
D+Y+ GC
Sbjct: 2134 DMYLTGC 2140
Query: 2 DIYIPGCPP 10
+IY GC P
Sbjct: 4904 EIYDGGCIP 4912
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 IYIPGCPP 10
+++PGC P
Sbjct: 221 MHLPGCVP 228
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 IYIPGCPP 10
+++PGC P
Sbjct: 221 LHLPGCVP 228
>sp|PG209_MONPV|PROTEIN OPG209|Monkeypox virus (MPXV)
Query: 3 IYIPGCPP 10
+YIP PP
Sbjct: 21 LYIPVIPP 28
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 105 LHAPGCVP 112
>sp|PG081_MONPV|PROTEIN OPG081|Monkeypox virus (MPXV)
Query: 3 IYIPG 7
IYIPG
Sbjct: 59 IYIPG 63
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 3 IYIPGCPP 10
+++PGC P
Sbjct: 221 LHLPGCVP 228
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 105 LHTPGCVP 112
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 IYIPGCPP 10
+++PGC P
Sbjct: 221 LHLPGCLP 228
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 IYIPGCPP 10
+++PGC P
Sbjct: 221 MHLPGCVP 228
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 IYIPGCPP 10
+++PGC P
Sbjct: 221 MHLPGCVP 228
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 1 VDIYIPGCPP 10
VD+ +P PP
Sbjct: 82 VDVSVPARPP 91
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 IYIPGCPP 10
+++PGC P
Sbjct: 221 LHLPGCLP 228
>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3
Query: 1 VDIYIPGCPP 10
VD+ +P PP
Sbjct: 82 VDVSVPAKPP 91
>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28
Query: 1 VDIYIPGCPP 10
VD+ +P PP
Sbjct: 82 VDVSVPARPP 91
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 5 IPGCP 9
+PGCP
Sbjct: 169 LPGCP 173
>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)
Query: 3 IYIPGC 8
+YI GC
Sbjct: 50 VYITGC 55
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 5 IPGCPP 10
+PG PP
Sbjct: 273 VPGAPP 278
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 5 IPGCPP 10
+PG PP
Sbjct: 273 VPGAPP 278
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 VDIYIPGCPP 10
V ++ PGC P
Sbjct: 219 VILHTPGCVP 228
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VDIYIPGCPP 10
V ++ PGC P
Sbjct: 219 VIMHTPGCVP 228
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 1 VDIYIPGC 8
D Y+ GC
Sbjct: 190 ADFYLSGC 197
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 1 VDIYIPGCPP 10
VD+ IP PP
Sbjct: 82 VDVSIPTRPP 91
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 2 DIYIPGC 8
D+Y+ GC
Sbjct: 558 DLYVGGC 564
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 221 LHTPGCVP 228
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 93 LHSPGCVP 100
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 5 IPGCPP 10
+PG PP
Sbjct: 273 VPGAPP 278
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 VDIYIPGCPP 10
V ++ PGC P
Sbjct: 219 VILHTPGCIP 228
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 221 MHTPGCVP 228
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 221 LHTPGCVP 228
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 105 LHTPGCVP 112
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 221 LHTPGCVP 228
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 221 MHTPGCVP 228
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 221 MHTPGCVP 228
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 221 MHTPGCVP 228
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 221 MHTPGCVP 228
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 DIYIPGCPP 10
+IY GC P
Sbjct: 4846 EIYDGGCIP 4854
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DIYIPGCP 9
+IY PG P
Sbjct: 466 NIYFPGEP 473
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 221 LHTPGCVP 228
>sp|LHDAG_HDVV2|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 YIPGC 8
++PGC
Sbjct: 207 WVPGC 211
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 221 MHTPGCVP 228
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 221 MHTPGCVP 228
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 IYIPGCPP 10
++ PGC P
Sbjct: 221 LHTPGCVP 228
37|Sequence|181|190|PGCPPTAEAL
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 PGCPP 5
PGCPP
Sbjct: 262 PGCPP 266
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 PGCPP 5
PGCPP
Sbjct: 262 PGCPP 266
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 PGCPP 5
PGCPP
Sbjct: 262 PGCPP 266
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 PGCPPTAEAL 10
P CPP EAL
Sbjct: 511 PACPPDDEAL 520
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 PGCPPTAEA 9
P CPP +A
Sbjct: 710 PHCPPDLDA 718
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 PGCPPTAEA 9
P CPP +A
Sbjct: 710 PHCPPDLDA 718
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 PGCPPTAEA 9
P CPP +A
Sbjct: 710 PHCPPDLDA 718
>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)
Query: 3 CPPTA 7
CPPTA
Sbjct: 314 CPPTA 318
>sp|NCAP_SINV|NUCLEOPROTEIN Nombre orthohantavirus (SNV) (Sin
Query: 3 CPPTA 7
CPPTA
Sbjct: 314 CPPTA 318
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 3 CPPTA 7
CPPTA
Sbjct: 314 CPPTA 318
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 PGCPPTAE 8
P CPP +
Sbjct: 769 PNCPPNID 776
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 PGCPP 5
P CPP
Sbjct: 769 PNCPP 773
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 GCPPT 6
GCPP+
Sbjct: 1263 GCPPS 1267
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 GCPPT 6
GCPP+
Sbjct: 1286 GCPPS 1290
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 GCPPT 6
GCPP+
Sbjct: 1286 GCPPS 1290
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 PGCPPT 6
P CPP+
Sbjct: 710 PYCPPS 715
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 GCPPTAEA 9
GCPP ++A
Sbjct: 2375 GCPPDSDA 2382
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 3 CPPT 6
CPPT
Sbjct: 315 CPPT 318
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 1 PGCPPT 6
PGC PT
Sbjct: 382 PGCVPT 387
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 3 CPPT 6
CPPT
Sbjct: 315 CPPT 318
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 3 CPPT 6
CPPT
Sbjct: 315 CPPT 318
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 3 CPPTAEAL 10
CP TAE +
Sbjct: 783 CPVTAEKV 790
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 3 CPPT 6
CPPT
Sbjct: 319 CPPT 322
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 3 CPPT 6
CPPT
Sbjct: 319 CPPT 322
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 3 CPPT 6
CPPT
Sbjct: 319 CPPT 322
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 3 CPPT 6
CPPT
Sbjct: 319 CPPT 322
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 PGCPPTAEAL 10
P C PT + L
Sbjct: 234 PLCNPTIDGL 243
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 CPPT 6
CPPT
Sbjct: 319 CPPT 322
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 3 CPPT 6
CPPT
Sbjct: 315 CPPT 318
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 3 CPPT 6
CPPT
Sbjct: 276 CPPT 279
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 1 PGCPPTAEAL 10
P C PT E L
Sbjct: 209 PFCWPTEELL 218
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 GCPP 5
GCPP
Sbjct: 659 GCPP 662
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PGCPPT 6
PG PPT
Sbjct: 410 PGLPPT 415
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PGCPPT 6
PG PPT
Sbjct: 410 PGLPPT 415
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 GCPPTAEA 9
GCPP ++
Sbjct: 2375 GCPPDSDV 2382
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 PGCPPTAEA 9
P PP AEA
Sbjct: 490 PAGPPVAEA 498
38|Sequence|186|195|TAEALLYGIL
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 ALLYGIL 10
+LLYGI+
Sbjct: 304 SLLYGIM 310
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 ALLYGIL 10
+LLYGI+
Sbjct: 304 SLLYGIM 310
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 ALLYGIL 10
+LLYGI+
Sbjct: 304 SLLYGIM 310
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 3 EALLYGI 9
EAL YG+
Sbjct: 176 EALTYGV 182
39|Sequence|191|200|LYGILQLQRK
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LYGILQLQRK 10
++GI QLQ K
Sbjct: 548 IWGIKQLQAK 557
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 YGILQLQR 9
YG L LQR
Sbjct: 597 YGDLDLQR 604
>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain
Query: 1 LYGILQLQ 8
LY I++LQ
Sbjct: 85 LYAIIELQ 92
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 LYGILQLQ 8
+YG LQL+
Sbjct: 299 VYGCLQLK 306
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 YGILQLQR 9
YG L+LQ+
Sbjct: 662 YGDLELQK 669
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 YGILQLQR 9
YG L+LQ+
Sbjct: 662 YGDLELQK 669
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 YGILQLQR 9
YG L+LQ+
Sbjct: 662 YGDLELQK 669
40|Sequence|196|205|QLQRKIKRER
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 1 QLQRKIKRER 10
Q QR+I+RER
Sbjct: 506 QSQREIERER 515
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 1 QLQRKIKRER 10
Q QR+I+RER
Sbjct: 506 QSQREIERER 515
>sp|U148B_HCMVM|PROTEIN UL148B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LQRKIKRER 10
LQR I+R R
Sbjct: 45 LQRSIRRWR 53
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 LQRKIKRE 9
L+RK K+E
Sbjct: 2213 LKRKFKKE 2220
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 LQRKIKRE 9
L+RK K+E
Sbjct: 2212 LKRKFKKE 2219
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 LQRKIKRE 9
L+RK K+E
Sbjct: 2212 LKRKFKKE 2219
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 2 LQRKIKRE 9
L+RK K+E
Sbjct: 2212 LKRKFKKE 2219
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 LQRKIKRE 9
L+RK K+E
Sbjct: 2210 LKRKFKKE 2217
>sp|M1_I35A3|MATRIX protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 1 QLQRKIKRE 9
+L RKIKRE
Sbjct: 98 KLYRKIKRE 106
41|Sequence|201|213|IKRERRLQIWYRR
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 2 KRERRLQIW 10
+ E RLQIW
Sbjct: 120 RTESRLQIW 128
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 2 KRERRLQIW 10
+ E RLQIW
Sbjct: 119 RTESRLQIW 127
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 2 KRERRLQIW 10
+ E RLQIW
Sbjct: 151 RMEFRLQIW 159
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 2 KRERRLQIW 10
+ E RLQIW
Sbjct: 151 RMEFRLQIW 159
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 2 KRERRLQIW 10
+ E RLQIW
Sbjct: 120 RTEFRLQIW 128
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 KRERRLQIW 10
+ ERRL +W
Sbjct: 1448 REERRLALW 1456
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 ERRLQIWYR 12
E RL++W R
Sbjct: 3317 EDRLEVWNR 3325
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 RERRLQIWYRR 13
+E+R+Q W ++
Sbjct: 3164 KEKRIQEWLQK 3174
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 6 RLQIWYR 12
+L+ WYR
Sbjct: 241 KLKTWYR 247
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 2 KRERRLQIWYRR 13
KRE + W +R
Sbjct: 403 KREMTMSQWIKR 414
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 1 IKRERRLQIWYRR 13
++R+R LQ+ +R
Sbjct: 688 LQRQRELQLQLKR 700
>sp|PG147_VARV|VIRION membrane protein OPG147|Variola virus
Query: 1 IKRERRLQIWYRR 13
++RER + Y+R
Sbjct: 26 MRRERAAYVNYKR 38
>sp|PG147_VAR67|VIRION membrane protein OPG147|Variola virus (isolate
Query: 1 IKRERRLQIWYRR 13
++RER + Y+R
Sbjct: 26 MRRERAAYVNYKR 38
>sp|PG147_VACCC|VIRION membrane protein OPG147|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IKRERRLQIWYRR 13
++RER + Y+R
Sbjct: 26 MRRERAAYVNYKR 38
>sp|A21_VACCA|VIRION membrane protein A21|Vaccinia virus (strain Ankara) (VACV)
Query: 1 IKRERRLQIWYRR 13
++RER + Y+R
Sbjct: 26 MRRERAAYVNYKR 38
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 3 RERRLQIW 10
RER+ Q W
Sbjct: 653 RERKRQAW 660
>sp|PG147_MONPV|VIRION membrane protein OPG147|Monkeypox virus (MPXV)
Query: 1 IKRERRLQIWYRR 13
++RER + Y+R
Sbjct: 26 MRRERAAYVNYKR 38
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 RRLQIWYR 12
R LQ+W R
Sbjct: 461 RELQVWGR 468
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 RRLQIWYR 12
R LQ+W R
Sbjct: 463 RELQVWGR 470
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 RRLQIWYR 12
R LQ+W R
Sbjct: 473 RELQVWGR 480
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 RRLQIWYR 12
R LQ+W R
Sbjct: 458 RELQVWGR 465
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 RRLQIWYR 12
R LQ+W R
Sbjct: 473 RELQVWGR 480
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 RRLQIWYR 12
R LQ+W R
Sbjct: 463 RELQVWGR 470
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 5 RRLQIW 10
RRL++W
Sbjct: 126 RRLRLW 131
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 5 RRLQIW 10
RRL++W
Sbjct: 126 RRLRLW 131
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 RRLQIWYR 12
R LQ+W R
Sbjct: 461 RELQVWGR 468
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 RRLQIWYR 12
R LQ+W R
Sbjct: 473 RELQVWGR 480
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 RRLQIWYR 12
R LQ+W R
Sbjct: 461 RELQVWGR 468
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 RRLQIWYR 12
R LQ+W R
Sbjct: 461 RELQVWGR 468
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 ERRLQIWYR 12
E LQ+W R
Sbjct: 3310 EDMLQVWNR 3318
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 4 ERRLQIWYR 12
E LQ+W R
Sbjct: 3330 EDMLQVWNR 3338
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 2 KRERRLQIW 10
KRE L IW
Sbjct: 181 KREPALIIW 189
>sp|TAT_HV2ST|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 7 LQIWYRR 13
L IWY R
Sbjct: 72 LGIWYER 78
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 2 KRERRLQIW 10
KRE L IW
Sbjct: 181 KREPALIIW 189
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 2 KRERRLQIW 10
KRE L IW
Sbjct: 181 KREPALIIW 189
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 2 KRERRLQIW 10
KRE L IW
Sbjct: 181 KREPALIIW 189
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 ERRLQIWYR 12
E LQ+W R
Sbjct: 3339 EDMLQVWNR 3347
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 2 KRERRLQIW 10
KRE L IW
Sbjct: 181 KREPALIIW 189
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 ERRLQIWYR 12
E LQ+W R
Sbjct: 3339 EDMLQVWNR 3347
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 ERRLQIWYR 12
E LQ+W R
Sbjct: 3339 EDMLQVWNR 3347
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 ERRLQIWYR 12
E LQ+W R
Sbjct: 3339 EDMLQVWNR 3347
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 2 KRERRLQIW 10
KRE L IW
Sbjct: 181 KREPALIIW 189
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 2 KRERRLQIW 10
KRE L IW
Sbjct: 181 KREPALIIW 189