1|SequenceR|10|1|LRCFTMAAAM
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LRCFTMAA 8
L CF MAA
Sbjct: 141 LLCFVMAA 148
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 CFTMAA 8
CF MAA
Sbjct: 143 CFVMAA 148
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 CFTMAA 8
CF MAA
Sbjct: 143 CFVMAA 148
>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RCFTMAAAM 10
RC TM+ M
Sbjct: 98 RCDTMSGGM 106
>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 RCFTMAAAM 10
RC TM+ M
Sbjct: 98 RCDTMSGGM 106
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RCFTMAAAM 10
RC T+A A+
Sbjct: 356 RCDTLATAL 364
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RCFTMAAAM 10
RC T+A A+
Sbjct: 356 RCDTLATAL 364
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 RCFTMAAAM 10
RC T+A A+
Sbjct: 356 RCDTLATAL 364
2|SequenceR|15|6|GCRNLLRCFT
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GCRNLL 6
GCRNLL
Sbjct: 775 GCRNLL 780
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 GCRNLLRCF 9
GC LLR F
Sbjct: 175 GCGTLLRAF 183
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 2 CRNLLR 7
CRNL+R
Sbjct: 590 CRNLVR 595
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 2 CRNLLR 7
CRNL+R
Sbjct: 874 CRNLVR 879
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CRNLLR 7
CRNL+R
Sbjct: 874 CRNLVR 879
>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 1 GCRNLLRCF 9
CR ++RC+
Sbjct: 120 ACRIIMRCW 128
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCRNLLRCFT 10
GC+ L C+T
Sbjct: 599 GCKGKLVCYT 608
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCRNLLRCFT 10
GC+ L C+T
Sbjct: 609 GCKGKLICYT 618
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CRNLLR 7
CRN+L+
Sbjct: 250 CRNILK 255
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 CRNLLR 7
CRN+L+
Sbjct: 250 CRNILK 255
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 CRNLLR 7
CR+LLR
Sbjct: 416 CRHLLR 421
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 911 GCDTIARC 918
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 911 GCDTIARC 918
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 911 GCDTIARC 918
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 909 GCDTIARC 916
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 908 GCDTIARC 915
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 908 GCDTIARC 915
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 918 GCDTIARC 925
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 906 GCDTIARC 913
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 911 GCDTIARC 918
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 899 GCDTIARC 906
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 900 GCDTIARC 907
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 898 GCDTIARC 905
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 898 GCDTIARC 905
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 902 GCDTIARC 909
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 911 GCDTIARC 918
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 GCRNLLRC 8
GC + RC
Sbjct: 911 GCDTIARC 918
>sp|US10_CHV1|VIRION protein US10 homolog|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 2 CRNLLRCF 9
CR+L R F
Sbjct: 189 CRHLFRAF 196
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GCRNLLR 7
GC+ +LR
Sbjct: 56 GCQKILR 62
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 GCRNLLR 7
GC+ +LR
Sbjct: 56 GCQKILR 62
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 CRNLLRCFT 10
CR+ + C T
Sbjct: 724 CRSRVACLT 732
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 CRNLLRCFT 10
CR+ + C T
Sbjct: 724 CRSRVACLT 732
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CRNLLRCF 9
C N + CF
Sbjct: 2709 CGNTITCF 2716
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GCRNLLRC 8
GC LL C
Sbjct: 167 GCGPLLAC 174
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 1 GCRNLLRC 8
GC LL C
Sbjct: 137 GCGPLLAC 144
3|SequenceR|20|11|SRAAEGCRNL
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
AEGCR +
Sbjct: 54 AEGCRQI 60
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 AAEGCRNL 10
++EGCR +
Sbjct: 53 SSEGCRQI 60
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 GCRNL 10
GCRNL
Sbjct: 775 GCRNL 779
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 SRAAEGCR 8
SRA E CR
Sbjct: 200 SRAQELCR 207
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
AEGCR +
Sbjct: 54 AEGCRQI 60
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRKI 60
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EGCRNL 10
EGCR +
Sbjct: 55 EGCRQI 60
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EGCRNL 10
EGCR +
Sbjct: 55 EGCRQI 60
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 AAEGCRNL 10
++EGCR +
Sbjct: 53 SSEGCRQI 60
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRKI 60
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 5 EGCRNL 10
EGCR +
Sbjct: 55 EGCRQI 60
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 AEGCRNL 10
+EGCR +
Sbjct: 54 SEGCRQI 60
4|SequenceR|25|16|AGLPLSRAAE
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 AGLPLS 6
AGLPLS
Sbjct: 825 AGLPLS 830
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 AGLPLSR 7
AG+PLS+
Sbjct: 237 AGIPLSQ 243
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 AGLPLS 6
AGLP+S
Sbjct: 309 AGLPIS 314
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 AGLPLS 6
AGLP+S
Sbjct: 309 AGLPIS 314
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 AGLPLS 6
AGLP+S
Sbjct: 309 AGLPIS 314
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 1 AGLPLS 6
AGLP+S
Sbjct: 309 AGLPIS 314
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 AGLPLS 6
AGLP+S
Sbjct: 309 AGLPIS 314
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 AGLPLS 6
AGLP+S
Sbjct: 309 AGLPIS 314
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 AGLPLS 6
AGLP+S
Sbjct: 309 AGLPIS 314
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 AGLPLSR 7
AG+PLS+
Sbjct: 237 AGVPLSQ 243
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 PLSRAA 9
PLSRAA
Sbjct: 2816 PLSRAA 2821
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 PLSRAA 9
PLSRAA
Sbjct: 2813 PLSRAA 2818
5|SequenceR|30|21|VGFCRAGLPL
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 FCRAGLP 9
FCR G+P
Sbjct: 1667 FCRVGVP 1673
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 GFCRAGLP 9
GFCR +P
Sbjct: 965 GFCRLWIP 972
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 GFCRAGLP 9
GFCR +P
Sbjct: 965 GFCRLWIP 972
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 GFCRAGLP 9
GFCR +P
Sbjct: 965 GFCRLWIP 972
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 VGFCRAGLP 9
V C++GLP
Sbjct: 711 VDLCKSGLP 719
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 VGFCRAGLP 9
V C++GLP
Sbjct: 711 VDLCKSGLP 719
>sp|UL30_HCMVM|UNCHARACTERIZED protein UL30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GFCRAG 7
FCRAG
Sbjct: 52 AFCRAG 57
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VGFCRAGLP 9
VGF GLP
Sbjct: 2862 VGFVVPGLP 2870
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VGFCRAGLP 9
VGF GLP
Sbjct: 2862 VGFVVPGLP 2870
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 RAGLPL 10
RAGLP+
Sbjct: 308 RAGLPI 313
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 RAGLPL 10
RAGLP+
Sbjct: 308 RAGLPI 313
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 5 RAGLPL 10
RAGLP+
Sbjct: 308 RAGLPI 313
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 RAGLPL 10
RAGLP+
Sbjct: 308 RAGLPI 313
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 RAGLPL 10
RAGLP+
Sbjct: 308 RAGLPI 313
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 RAGLPL 10
RAGLP+
Sbjct: 308 RAGLPI 313
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 5 RAGLPL 10
RAG+PL
Sbjct: 216 RAGVPL 221
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 5 RAGLPL 10
RAG+PL
Sbjct: 214 RAGVPL 219
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 VGFCRAGL 8
+ +CR GL
Sbjct: 2967 MSYCRVGL 2974
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 VGFCRAGL 8
+ +CR GL
Sbjct: 2967 MSYCRVGL 2974
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VGFCRAGLP 9
+GF GLP
Sbjct: 2839 IGFIVPGLP 2847
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VGFCRAGLP 9
+GF GLP
Sbjct: 2839 IGFIVPGLP 2847
>sp|NS12_CVHOC|NON-STRUCTURAL protein of 12.9 kDa|Human coronavirus OC43 (HCoV-OC43)
Query: 1 VGFCR 5
VG+CR
Sbjct: 36 VGYCR 40
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 FCRAGLP 9
FC G P
Sbjct: 318 FCTVGFP 324
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 VGFCRA 6
+GFC++
Sbjct: 1621 IGFCKS 1626
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 VGFCRA 6
+GFC++
Sbjct: 1619 IGFCKS 1624
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 VGFCRA 6
+GFC++
Sbjct: 1618 IGFCKS 1623
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 VGFCRA 6
+GFC++
Sbjct: 1609 IGFCKS 1614
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 VGFCRA 6
+GFC++
Sbjct: 1617 IGFCKS 1622
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 FCRAGLP 9
FC G P
Sbjct: 318 FCTVGFP 324
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 2 GFCRAGLPL 10
G C+ LPL
Sbjct: 212 GSCKYALPL 220
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 2 GFCRAGLPL 10
G C+ LPL
Sbjct: 212 GSCKYALPL 220
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 2 GFCRAGLPL 10
G C+ LPL
Sbjct: 212 GSCKYALPL 220
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 2 GFCRAGLPL 10
G C+ LPL
Sbjct: 212 GSCKYALPL 220
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GFCRAGLPL 10
GF R GL L
Sbjct: 319 GFVRVGLAL 327
>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 2 GFCRAGLPL 10
G CR LPL
Sbjct: 212 GPCRYTLPL 220
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GFCRAGLPL 10
GF R GL L
Sbjct: 318 GFVRVGLAL 326
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 2 GFCRAGLPL 10
G C+ LPL
Sbjct: 212 GSCKYALPL 220
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 VGFCRAGLP 9
CR G+P
Sbjct: 1129 AALCRTGVP 1137
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 VGFCRAGLP 9
CR G+P
Sbjct: 1129 AALCRTGVP 1137
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 VGFCRAGLP 9
CR G+P
Sbjct: 1129 AALCRTGVP 1137
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 VGFCRAGLP 9
CR G+P
Sbjct: 1129 AALCRTGVP 1137
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 VGFCRAGLP 9
CR G+P
Sbjct: 1129 AALCRTGVP 1137
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 VGFCRAGLP 9
CR G+P
Sbjct: 1129 AALCRTGVP 1137
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 VGFCRAGLP 9
CR G+P
Sbjct: 1129 AALCRTGVP 1137
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GFCRAGLPL 10
GF R GL L
Sbjct: 319 GFVRVGLAL 327
6|SequenceR|35|26|TPSVRVGFCR
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 TPSVRVGFC 9
TP+ R+ FC
Sbjct: 737 TPNARIPFC 745
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 TPSVRVGFC 9
TP+ R+ FC
Sbjct: 737 TPNARIPFC 745
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 TPSVRVG 7
TP +R+G
Sbjct: 136 TPDIRIG 142
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 1 TPSVRVG 7
TP +R+G
Sbjct: 136 TPDIRIG 142
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 TPSVRVG 7
TP +R+G
Sbjct: 136 TPDIRIG 142
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 1 TPSVRVG 7
TP +R+G
Sbjct: 136 TPDIRIG 142
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 1 TPSVRVG 7
TP +R+G
Sbjct: 136 TPDIRIG 142
>sp|NS12_CVHOC|NON-STRUCTURAL protein of 12.9 kDa|Human coronavirus OC43 (HCoV-OC43)
Query: 5 RVGFCR 10
+VG+CR
Sbjct: 35 KVGYCR 40
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain
Query: 3 SVRVGFC 9
++R GFC
Sbjct: 2 AIRTGFC 8
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 SVRVGFC 9
++R GFC
Sbjct: 2 AIRTGFC 8
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 2 PSVRVG 7
PSVRVG
Sbjct: 76 PSVRVG 81
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 PSVRVG 7
PSVR+G
Sbjct: 1867 PSVRMG 1872
>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 VRVGFCR 10
+RVGF R
Sbjct: 313 LRVGFAR 319
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 PSVRVG 7
PSVR+G
Sbjct: 1861 PSVRMG 1866
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 VRVGFCR 10
+RVGF R
Sbjct: 313 LRVGFAR 319
>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SVRVGFCR 10
S+R FCR
Sbjct: 78 SIRARFCR 85
>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)
Query: 4 VRVGFCR 10
+RVGF R
Sbjct: 368 LRVGFAR 374
7|SequenceR|40|31|TVKEGTPSVR
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 VKEGTPS 8
VKEG PS
Sbjct: 1574 VKEGLPS 1580
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 VKEGTPS 8
VKEG PS
Sbjct: 1573 VKEGLPS 1579
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 4 EGTPSV 9
+GTPSV
Sbjct: 99 DGTPSV 104
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 TVKEGT 6
TVKEGT
Sbjct: 402 TVKEGT 407
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 TVKEGT 6
TVKEGT
Sbjct: 402 TVKEGT 407
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 TVKEGTPS 8
TVKEGT +
Sbjct: 524 TVKEGTAT 531
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 4 EGTPSV 9
+GTPSV
Sbjct: 99 DGTPSV 104
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 TVKEGT 6
TVKEGT
Sbjct: 402 TVKEGT 407
>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain
Query: 2 VKEGTPS 8
+KEG PS
Sbjct: 92 LKEGNPS 98
>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)
Query: 2 VKEGTPS 8
+KEG PS
Sbjct: 92 LKEGNPS 98
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 2 VKEGTPSV 9
+K G PS+
Sbjct: 59 IKSGNPSI 66
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 TVKEGTPSV 9
T+KEG SV
Sbjct: 1494 TMKEGNRSV 1502
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 TVKEGTPSV 9
T+KEG SV
Sbjct: 1495 TMKEGNRSV 1503
8|SequenceR|45|36|VQGTHTVKEG
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 5 HTVKEG 10
HTVKEG
Sbjct: 401 HTVKEG 406
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 2 QGTHTVKEG 10
+GT T KEG
Sbjct: 5 KGTDTAKEG 13
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 5 HTVKEG 10
HTVKEG
Sbjct: 401 HTVKEG 406
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 5 HTVKEG 10
HTVKEG
Sbjct: 401 HTVKEG 406
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 VQGTHTVKE 9
V THT+KE
Sbjct: 1168 VLNTHTLKE 1176
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 VQGTHTVKE 9
V THT+KE
Sbjct: 1168 VLNTHTLKE 1176
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 VQGTHTVKE 9
V THT+KE
Sbjct: 1168 VLNTHTLKE 1176
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 QGTHTVK 8
QG HT+K
Sbjct: 629 QGFHTIK 635
>sp|NEC2_HHV6U|NUCLEAR egress protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VQGTHTVKE 9
V+G H V+E
Sbjct: 95 VEGHHAVRE 103
>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse
Query: 3 GTHTVKEG 10
G H VK+G
Sbjct: 164 GIHRVKQG 171
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 3 GTHTVKEG 10
G H VK+G
Sbjct: 164 GIHRVKQG 171
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 QGTHTV 7
QGTH V
Sbjct: 1119 QGTHIV 1124
>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain
Query: 2 QGTHTV 7
+GTHT+
Sbjct: 10 EGTHTL 15
9|SequenceR|50|41|DKDDYVQGTH
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 DKDDYVQGT 9
+++DYV GT
Sbjct: 867 NQEDYVVGT 875
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 DKDDYVQGT 9
+++DYV GT
Sbjct: 867 NQEDYVVGT 875
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 1 DKDDYVQ 7
DK D+VQ
Sbjct: 134 DKSDFVQ 140
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 KDDYVQGTH 10
K D+VQG
Sbjct: 280 KRDFVQGVQ 288
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 DDYVQGTH 10
D YV G H
Sbjct: 59 DTYVMGLH 66
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 DDYVQGT 9
DDYVQ +
Sbjct: 3953 DDYVQDS 3959
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 DDYVQGT 9
DDYVQ +
Sbjct: 3973 DDYVQDS 3979
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 DDYVQGT 9
DDYVQ +
Sbjct: 3953 DDYVQDS 3959
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 DKDDYVQGTH 10
D DDY++ +
Sbjct: 23 DSDDYIRAGY 32
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 DDYVQGTH 10
D YV G H
Sbjct: 59 DTYVMGLH 66
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 DYVQGTH 10
D+++G H
Sbjct: 295 DFIEGVH 301
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 DYVQGTH 10
D+++G H
Sbjct: 295 DFIEGVH 301
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 DYVQGTH 10
D+++G H
Sbjct: 295 DFIEGVH 301
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 DYVQGTH 10
D+++G H
Sbjct: 295 DFIEGVH 301
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 DYVQGTH 10
D+++G H
Sbjct: 295 DFIEGVH 301
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 DYVQGTH 10
D+++G H
Sbjct: 295 DFIEGVH 301
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 DYVQGTH 10
D+++G H
Sbjct: 295 DFIEGVH 301
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 DYVQGTH 10
D+++G H
Sbjct: 295 DFIEGVH 301
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 4 DYVQGTH 10
D+++G H
Sbjct: 295 DFIEGVH 301
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 DYVQGTH 10
D+++G H
Sbjct: 295 DFIEGVH 301
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 DDYVQGT 9
DDYVQ +
Sbjct: 3973 DDYVQDS 3979
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 DDYVQGT 9
DDYVQ +
Sbjct: 4003 DDYVQDS 4009
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 DDYVQGT 9
DDYVQ +
Sbjct: 4003 DDYVQDS 4009
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 DKDDYVQ 7
D DDY +
Sbjct: 60 DNDDYTE 66
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 3 DDYVQGTH 10
D Y+QG +
Sbjct: 593 DRYIQGVY 600
10|SequenceR|55|46|RIRRYDKDDY
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 RIRRYDKDDY 10
+IR Y K DY
Sbjct: 242 KIREYTKKDY 251
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 RIRRYDKDDY 10
+IR Y K DY
Sbjct: 242 KIREYTKKDY 251
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 1 RIRRYDK 7
R+R YDK
Sbjct: 865 RVRYYDK 871
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RIRRYDKD 8
R RYD D
Sbjct: 159 RFERYDTD 166
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RIRRYDKD 8
R RYD D
Sbjct: 159 RFERYDTD 166
>sp|KITH_VACCA|THYMIDINE kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RIRRYDKDDY 10
R+RRY Y
Sbjct: 24 RVRRYQIAQY 33
>sp|KITH_MONPZ|THYMIDINE kinase|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 RIRRYDKDDY 10
R+RRY Y
Sbjct: 24 RVRRYQIAQY 33
>sp|KITH_VACCT|THYMIDINE kinase|Vaccinia virus (strain Tian Tan)
Query: 1 RIRRYDKDDY 10
R+RRY Y
Sbjct: 24 RVRRYQIAQY 33
>sp|KITH_VACCC|THYMIDINE kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RIRRYDKDDY 10
R+RRY Y
Sbjct: 24 RVRRYQIAQY 33
>sp|KITH_MONPV|THYMIDINE kinase|Monkeypox virus (MPXV)
Query: 1 RIRRYDKDDY 10
R+RRY Y
Sbjct: 24 RVRRYQIAQY 33
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 IRRYDKDD 9
+R+YD D+
Sbjct: 383 LRQYDSDE 390
>sp|KITH_VARV|THYMIDINE kinase|Variola virus
Query: 1 RIRRYDKDDY 10
R+RRY Y
Sbjct: 24 RVRRYQIAQY 33
>sp|KITH_VAR67|THYMIDINE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RIRRYDKDDY 10
R+RRY Y
Sbjct: 24 RVRRYQIAQY 33
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 IRRYDKDD 9
+R+YD D+
Sbjct: 386 LRQYDSDE 393
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 2 IRRYDKDD 9
+R+YD D+
Sbjct: 390 LRQYDSDE 397
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 IRRYDKDD 9
+R+YD D+
Sbjct: 390 LRQYDSDE 397
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 IRRYDKDD 9
+R+YD D+
Sbjct: 390 LRQYDSDE 397
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 IRRYDKDD 9
+R+YD D+
Sbjct: 383 LRQYDSDE 390
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 IRRYDKDD 9
+R+YD D+
Sbjct: 390 LRQYDSDE 397
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 2 IRRYDKDD 9
+R+YD D+
Sbjct: 390 LRQYDSDE 397
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 IRRYDKDD 9
+R+YD D+
Sbjct: 390 LRQYDSDE 397
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 IRRYDKDD 9
+R+YD D+
Sbjct: 390 LRQYDSDE 397
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 2 IRRYDKDD 9
+R+YD D+
Sbjct: 390 LRQYDSDE 397
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 IRRYDKDD 9
+R+YD D+
Sbjct: 390 LRQYDSDE 397
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 IRRYDKDD 9
+R+YD D+
Sbjct: 390 LRQYDSDE 397
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 5 YDKDDY 10
YD DDY
Sbjct: 162 YDIDDY 167
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 RIRRYDKDD 9
R RY KDD
Sbjct: 82 RRPRYSKDD 90
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)
Query: 5 YDKDDY 10
YD DDY
Sbjct: 162 YDIDDY 167
11|SequenceR|60|51|QRGVFRIRRY
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 4 VFRIRRY 10
+F++RRY
Sbjct: 109 IFKVRRY 115
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 2 RGVFRIR 8
RG F+IR
Sbjct: 271 RGYFKIR 277
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 2 RGVFRIR 8
RG F+IR
Sbjct: 255 RGYFKIR 261
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 RGVFRIR 8
RG F+IR
Sbjct: 271 RGYFKIR 277
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 2 RGVFRIR 8
RG F+IR
Sbjct: 271 RGYFKIR 277
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 2 RGVFRIR 8
RG F+IR
Sbjct: 255 RGYFKIR 261
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 2 RGVFRIR 8
RG F+IR
Sbjct: 271 RGYFKIR 277
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 2 RGVFRIR 8
RG F+IR
Sbjct: 271 RGYFKIR 277
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 2 RGVFRIR 8
RG F+IR
Sbjct: 271 RGYFKIR 277
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 2 RGVFRIR 8
RG F+IR
Sbjct: 270 RGYFKIR 276
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 1 QRGVFR 6
Q+GVFR
Sbjct: 350 QQGVFR 355
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 2 RGVFRIRR 9
RGV R+RR
Sbjct: 67 RGVERLRR 74
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 5 FRIRRY 10
FRIR Y
Sbjct: 398 FRIRHY 403
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 QRGVFRIRR 9
+ GV+RI++
Sbjct: 1492 EEGVYRIKQ 1500
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 QRGVFRIRR 9
+ GV+RI++
Sbjct: 1492 EEGVYRIKQ 1500
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 QRGVFRIRR 9
+ GV+RI++
Sbjct: 1492 EEGVYRIKQ 1500
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 QRGVFRIRR 9
+ GV+RI++
Sbjct: 1492 EEGVYRIKQ 1500
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 QRGVFRIRR 9
+ GV+RI++
Sbjct: 1492 EEGVYRIKQ 1500
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 RGVFRI 7
RGVFR+
Sbjct: 496 RGVFRV 501
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 RGVFRI 7
RGVFR+
Sbjct: 496 RGVFRV 501
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 RGVFRI 7
RGVFR+
Sbjct: 496 RGVFRV 501
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 RGVFRI 7
RGVFR+
Sbjct: 496 RGVFRV 501
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 RGVFRI 7
RGVFR+
Sbjct: 497 RGVFRV 502
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 RGVFRI 7
RGVFR+
Sbjct: 497 RGVFRV 502
12|SequenceR|65|56|ENVEKQRGVF
>sp|VE6_HPV54|PROTEIN E6|Human papillomavirus type 54
Query: 2 NVEKQRGV 9
NVEKQR V
Sbjct: 114 NVEKQRHV 121
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 VEKQRGVF 10
VEKQ+G++
Sbjct: 883 VEKQKGMY 890
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 NVEKQRGVF 10
NV+ Q G+F
Sbjct: 1606 NVQTQPGIF 1614
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 ENVEKQ 6
EN+EKQ
Sbjct: 464 ENIEKQ 469
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ENVEKQ 6
EN+EKQ
Sbjct: 464 ENIEKQ 469
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 VEKQRGVF 10
VEKQ G++
Sbjct: 881 VEKQEGMY 888
Query: 1 ENVEKQRGVF 10
+NV+ + GVF
Sbjct: 1612 KNVQTKPGVF 1621
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 VEKQRGVF 10
VEKQ G++
Sbjct: 881 VEKQEGMY 888
Query: 1 ENVEKQRGVF 10
+NV+ + GVF
Sbjct: 1612 KNVQTKPGVF 1621
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 NVEKQRGV 9
+V+KQRG+
Sbjct: 753 DVKKQRGL 760
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 VEKQRGVF 10
VEKQ G++
Sbjct: 877 VEKQNGMY 884
Query: 1 ENVEKQRGVF 10
+NV+ + GVF
Sbjct: 1608 KNVQTKPGVF 1617
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 ENVEKQRGVF 10
EN++ + GVF
Sbjct: 427 ENIKYEVGVF 436
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 ENVEKQRGVF 10
ENV+ + G+F
Sbjct: 426 ENVKYEVGIF 435
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 ENVEKQRGVF 10
EN++ + GVF
Sbjct: 427 ENIKYEVGVF 436
>sp|PHOSP_ISFV|PHOSPHOPROTEIN virus (ISFV)
Query: 5 KQRGVF 10
KQRG++
Sbjct: 270 KQRGIY 275
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 ENVEKQRGVF 10
EN++ + G+F
Sbjct: 427 ENIKYEVGIF 436
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 ENVEKQRGVF 10
EN++ + G+F
Sbjct: 427 ENIKYEVGIF 436
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 ENVEKQRGVF 10
EN++ + G+F
Sbjct: 427 ENIKYEVGIF 436
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 ENVEKQRGVF 10
EN++ + G+F
Sbjct: 355 ENIKYEVGIF 364
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 ENVEKQRGVF 10
EN++ + G+F
Sbjct: 427 ENIKYEVGIF 436
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 ENVEKQRGVF 10
EN++ + G+F
Sbjct: 427 ENIKYEVGIF 436
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 ENVEKQRGVF 10
EN++ + G+F
Sbjct: 427 ENIKYEVGIF 436
13|SequenceR|70|61|DIAFNENVEK
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 IAFNEN 7
+AFNEN
Sbjct: 2096 VAFNEN 2101
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 285 VSFNQNLE 292
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 285 VSFNQNLE 292
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 304 VSFNQNLE 311
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 304 VSFNQNLE 311
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 276 VSFNQNLE 283
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 284 VSFNQNLE 291
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 284 VSFNQNLE 291
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 304 VSFNQNLE 311
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 289 VSFNQNLE 296
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 284 VSFNQNLE 291
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 284 VSFNQNLE 291
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 284 VSFNQNLE 291
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 284 VSFNQNLE 291
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 284 VSFNQNLE 291
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 284 VSFNQNLE 291
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 304 VSFNQNLE 311
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 304 VSFNQNLE 311
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 284 VSFNQNLE 291
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 2 IAFNENVE 9
++FN+N+E
Sbjct: 304 VSFNQNLE 311
14|SequenceR|75|66|QEAILDIAFN
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 QEAILDI 7
+EAILDI
Sbjct: 524 REAILDI 530
15|SequenceR|80|71|VESVPQEAIL
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 ESVPQEAIL 10
+S P+EA+L
Sbjct: 799 QSTPEEAVL 807
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 ESVPQEAIL 10
+S P+EA+L
Sbjct: 794 QSSPEEAVL 802
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 ESVPQEAIL 10
+S P+EA+L
Sbjct: 794 QSSPEEAVL 802
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 ESVPQEAIL 10
+S P+EA+L
Sbjct: 794 QSSPEEAVL 802
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 ESVPQEAIL 10
+S P+EA+L
Sbjct: 794 QSSPEEAVL 802
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 ESVPQEAIL 10
+S P+EA+L
Sbjct: 799 QSPPEEAVL 807
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 ESVPQEAI 9
++VPQ+A+
Sbjct: 1479 QTVPQDAV 1486
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 ESVPQEAI 9
++VPQ+A+
Sbjct: 1479 QTVPQDAV 1486
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 ESVPQEAI 9
++VPQ+A+
Sbjct: 1479 QTVPQDAV 1486
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 VESVPQEAI 9
+ +VPQ+A+
Sbjct: 1474 ITTVPQDAV 1482
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 ESVPQEAI 9
++VPQ+A+
Sbjct: 1479 QTVPQDAV 1486
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 ESVPQEAI 9
++VPQ+A+
Sbjct: 1479 QTVPQDAV 1486
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 ESVPQEAI 9
ES+P E +
Sbjct: 1491 ESIPSEGV 1498
>sp|TRX1_EBVB9|TRIPLEX capsid protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 SVPQEAIL 10
+VPQEA +
Sbjct: 224 TVPQEAFV 231
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VESVPQE 7
+ES+P+E
Sbjct: 564 LESIPEE 570
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 1 VESVPQE 7
+ES+P+E
Sbjct: 564 LESIPEE 570
16|SequenceR|85|76|IVRTEVESVP
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 VRTEVESVP 10
V +EVE VP
Sbjct: 126 VSSEVEEVP 134
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 VRTEVESVP 10
+R E+E VP
Sbjct: 1458 IRQELEQVP 1466
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 VRTEVESVP 10
+R E+E VP
Sbjct: 1458 IRQELEQVP 1466
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 VRTEVESVP 10
+R E+E++P
Sbjct: 1458 IRDELETIP 1466
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 VRTEVESVP 10
+R E+E++P
Sbjct: 1458 IRDELETIP 1466
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 VRTEVESVP 10
+R E+E++P
Sbjct: 1458 IRDELETIP 1466
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 VRTEVESVP 10
+R E+E++P
Sbjct: 1458 IRDELETIP 1466
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 VRTEVESVP 10
+R E+E++P
Sbjct: 1458 IRDELETIP 1466
>sp|YVDC_VACCC|UNCHARACTERIZED 7.3 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IVRTEVESVP 10
++RT++ S+P
Sbjct: 54 VLRTKITSLP 63
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 4 TEVESVP 10
T+VE VP
Sbjct: 131 TQVEEVP 137
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 VRTEVESV 9
V+TE+E V
Sbjct: 1085 VKTEIEQV 1092
17|SequenceR|90|81|GGDCAIVRTE
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 1 GGDCAI 6
GG+CAI
Sbjct: 128 GGNCAI 133
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 1 GGDCAI 6
GG+CAI
Sbjct: 128 GGNCAI 133
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 1 GGDCAI 6
GG+CAI
Sbjct: 127 GGNCAI 132
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 1 GGDCAI 6
GG+CAI
Sbjct: 128 GGNCAI 133
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 1 GGDCAI 6
GG+CAI
Sbjct: 128 GGNCAI 133
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 1 GGDCAI 6
GG+CAI
Sbjct: 128 GGNCAI 133
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 GGDCAIVRTE 10
GG A+++TE
Sbjct: 38 GGTSAVLQTE 47
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain
Query: 1 GGDCAIVRTE 10
GG A+++TE
Sbjct: 38 GGTSAVLQTE 47
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 GGDCAIVRTE 10
GG A+++TE
Sbjct: 38 GGTSAVLQTE 47
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 1 GGDCAIVRTE 10
GGD +VR E
Sbjct: 157 GGDHMLVRPE 166
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 2 GDCAIVRTE 10
G CA+V T+
Sbjct: 235 GTCAVVMTD 243
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 2 GDCAIVRTE 10
G CA+V T+
Sbjct: 235 GTCAVVMTD 243
>sp|GJ_HHV11|ENVELOPE glycoprotein J|Human herpesvirus 1 (strain 17)
Query: 1 GGDCAIV 7
GG CA+V
Sbjct: 57 GGLCAVV 63
18|SequenceR|95|86|GLAGGGGDCA
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 GLAGGGGDC 9
GLA GGG+C
Sbjct: 942 GLAPGGGNC 950
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 GLAGGGGDC 9
GLA GGG+C
Sbjct: 942 GLAPGGGNC 950
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 GLAGGGGDC 9
GLA GGG+C
Sbjct: 942 GLAPGGGNC 950
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 GLAGGGGDC 9
GLA GGG+C
Sbjct: 942 GLAPGGGNC 950
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 GLAGGGGDC 9
GLA GGG+C
Sbjct: 942 GLAPGGGNC 950
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 GLAGGGGDC 9
GLA GGG+C
Sbjct: 942 GLAPGGGNC 950
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 GLAGGGGDC 9
GLA GGG+C
Sbjct: 942 GLAPGGGNC 950
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 GLAGGGGDC 9
GLA GGG+C
Sbjct: 942 GLAPGGGNC 950
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 GLAGGGGDC 9
GLA GGG+C
Sbjct: 942 GLAPGGGNC 950
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 4 GGGGDCA 10
GGGG CA
Sbjct: 240 GGGGACA 246
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 LAGGGGDC 9
LAG G DC
Sbjct: 392 LAGPGADC 399
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 LAGGGGDC 9
LAG G DC
Sbjct: 392 LAGPGADC 399
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 2 LAGGGGDC 9
LAG G DC
Sbjct: 392 LAGPGADC 399
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 LAGGGGDC 9
LAG G DC
Sbjct: 392 LAGPGADC 399
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 2 LAGGGGD 8
LAGGG D
Sbjct: 776 LAGGGSD 782
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 LAGGGGDCA 10
L+ GGG CA
Sbjct: 1297 LSRGGGTCA 1305
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 LAGGGGDCA 10
L+ GGG CA
Sbjct: 1297 LSRGGGTCA 1305
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 LAGGGGDCA 10
L+ GGG CA
Sbjct: 1297 LSRGGGTCA 1305
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 LAGGGGDCA 10
L+ GGG CA
Sbjct: 1297 LSRGGGTCA 1305
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 LAGGGGDC 9
L+G G DC
Sbjct: 387 LSGPGADC 394
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 3 AGGGGD 8
AGG GD
Sbjct: 347 AGGNGD 352
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 AGGGGDC 9
AG G DC
Sbjct: 595 AGAGIDC 601
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 AGGGGDC 9
AG G DC
Sbjct: 595 AGAGIDC 601
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 GGGDC 9
GGDC
Sbjct: 1423 AGGDC 1427
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 LAGGGGDCA 10
L+ GGG CA
Sbjct: 1297 LSRGGGTCA 1305
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 LAGGGGDCA 10
L+ GGG CA
Sbjct: 1297 LSRGGGTCA 1305
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 LAGGGGDCA 10
L+ GGG CA
Sbjct: 1297 LSRGGGTCA 1305
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 LAGGGGDCA 10
L+ GGG CA
Sbjct: 1297 LSRGGGTCA 1305
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 LAGGGGDCA 10
L+ GGG CA
Sbjct: 1297 LSRGGGTCA 1305
>sp|U150A_HCMVM|UNCHARACTERIZED protein UL150A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GGGGDCA 10
GG G+C+
Sbjct: 249 GGDGECS 255
19|SequenceR|100|91|YVKPHGLAGG
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 YVKPHGLAGG 10
Y KP+G GG
Sbjct: 239 YFKPYGTMGG 248
Query: 1 YVKPHGLAG 9
YVKP G AG
Sbjct: 282 YVKPTGKAG 290
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 HGLAGG 10
HGLAGG
Sbjct: 3023 HGLAGG 3028
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 HGLAGG 10
HGLAGG
Sbjct: 2935 HGLAGG 2940
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YVKPHGLAGG 10
YVKP G + G
Sbjct: 5066 YVKPGGTSSG 5075
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YVKPHGLAGG 10
YVKP G + G
Sbjct: 5043 YVKPGGTSSG 5052
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 YVKPHGLAGG 10
YVKP G + G
Sbjct: 5052 YVKPGGTSSG 5061
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 YVKPHGLAGG 10
YVKP G + G
Sbjct: 5039 YVKPGGTSSG 5048
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 YVKPHGLAGG 10
YVKP G + G
Sbjct: 5077 YVKPGGTSSG 5086
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 YVKPHGLAGG 10
YVKP G + G
Sbjct: 5097 YVKPGGTSSG 5106
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 YVKPHGLAGG 10
YVKP G + G
Sbjct: 5127 YVKPGGTSSG 5136
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 YVKPHGL 7
YVK HGL
Sbjct: 959 YVKQHGL 965
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 YVKPHGLAG 9
YV P G AG
Sbjct: 281 YVNPSGKAG 289
Query: 1 YVKPHGLAGG 10
Y K +G GG
Sbjct: 238 YFKAYGTMGG 247
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 4 PHGLAGG 10
PHG AGG
Sbjct: 894 PHGAAGG 900
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 VKPHG 6
VKPHG
Sbjct: 323 VKPHG 327
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 VKPHG 6
VKPHG
Sbjct: 323 VKPHG 327
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 2 VKPHG 6
VKPHG
Sbjct: 323 VKPHG 327
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 4 PHGLAG 9
PH LAG
Sbjct: 228 PHALAG 233
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 3 KPHGLAG 9
+P GLAG
Sbjct: 659 RPEGLAG 665
>sp|ORF3C_SARS2|ORF3C protein|Severe acute respiratory syndrome coronavirus
Query: 3 KPHGLAGG 10
KPH L+ G
Sbjct: 17 KPHSLSDG 24
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 2 VKPHGLAGG 10
V PH + GG
Sbjct: 478 VVPHAVRGG 486
>sp|NEC2_HHV2H|NUCLEAR egress protein 2|Human herpesvirus 2 (strain HG52)
Query: 1 YVKPHGLAGG 10
+ +PHG GG
Sbjct: 100 FNRPHGAPGG 109
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 5 HGLAG 9
HGLAG
Sbjct: 152 HGLAG 156
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 5 HGLAG 9
HGLAG
Sbjct: 152 HGLAG 156
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 5 HGLAG 9
HGLAG
Sbjct: 152 HGLAG 156
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 KPHGLAGG 10
+P+G AGG
Sbjct: 407 QPYGAAGG 414
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 YVKPHG 6
Y+KP G
Sbjct: 147 YIKPDG 152
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 YVKPHG 6
Y+KP G
Sbjct: 147 YIKPDG 152
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 1 YVKPHG 6
Y+KP G
Sbjct: 147 YIKPDG 152
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 1 YVKPHG 6
Y+KP G
Sbjct: 147 YIKPDG 152
>sp|NCAP_NIPAV|NUCLEOPROTEIN virus
Query: 1 YVKPHGLAG 9
YV+ G+AG
Sbjct: 258 YVEETGMAG 266
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 YVKPHGLAG 9
YV+ G+AG
Sbjct: 258 YVEETGMAG 266
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 3 KPHGLAGG 10
+P G+ GG
Sbjct: 156 EPEGIEGG 163
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 KPHGLAGG 10
+P+G AGG
Sbjct: 407 QPYGAAGG 414
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 YVKPHGLAGG 10
Y KP G G
Sbjct: 4712 YFKPGGTTSG 4721
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 YVKPHGLAGG 10
Y KP G G
Sbjct: 4737 YFKPGGTTSG 4746
20|SequenceR|105|96|KDLNIYVKPH
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 DLNIYVKP 9
D+ IYVKP
Sbjct: 786 DVKIYVKP 793
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 NIYVKP 9
NIY KP
Sbjct: 1258 NIYTKP 1263
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 NIYVKP 9
NIY KP
Sbjct: 1258 NIYTKP 1263
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 NIYVKP 9
NIY KP
Sbjct: 1258 NIYTKP 1263
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 NIYVKP 9
NIY KP
Sbjct: 1258 NIYTKP 1263
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 NIYVKP 9
NIY KP
Sbjct: 1258 NIYTKP 1263
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 NIYVKP 9
NIY KP
Sbjct: 1258 NIYTKP 1263
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 NIYVKP 9
NIY KP
Sbjct: 1258 NIYTKP 1263
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 LNIYVKPH 10
LN+Y K H
Sbjct: 1845 LNLYTKHH 1852
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 LNIYVKPH 10
LN+Y K H
Sbjct: 1845 LNLYTKHH 1852
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 NIYVKP 9
NIY KP
Sbjct: 1258 NIYTKP 1263
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 NIYVKP 9
NIY KP
Sbjct: 1258 NIYTKP 1263
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 1 KDLNIYVKP 9
KDL +Y+ P
Sbjct: 451 KDLYVYLDP 459
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KDLNIYVKP 9
KDL +Y+ P
Sbjct: 452 KDLYVYLDP 460
>sp|NSP1A_ROTGA|NON-STRUCTURAL protein 1, peptide 1|Rotavirus B (isolate
Query: 5 IYVKP 9
IYVKP
Sbjct: 92 IYVKP 96
>sp|NSP1A_ROTGI|NON-STRUCTURAL protein 1, peptide 1|Rotavirus B (isolate RVB/Rat/United
Query: 4 NIYVKP 9
N+YV+P
Sbjct: 91 NLYVQP 96
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LNIYVKPH 10
LNI+ PH
Sbjct: 91 LNIFALPH 98
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 2 DLNIYVKPH 10
D N+++K H
Sbjct: 564 DYNLHLKAH 572
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 1 KDLNIY 6
+DLN+Y
Sbjct: 149 RDLNLY 154
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 1 KDLNIYVKP 9
K+L IY+ P
Sbjct: 448 KELYIYIDP 456
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 3 LNIYVKPH 10
L++Y KP+
Sbjct: 255 LSVYTKPY 262
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 DLNIYVKP 9
+ NIY KP
Sbjct: 771 NYNIYKKP 778
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 KDLNIYVKPH 10
K ++YV PH
Sbjct: 78 KPYSLYVFPH 87
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 LNIYVKPH 10
L++Y KP+
Sbjct: 255 LSVYTKPY 262
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 3 LNIYVKPH 10
L++Y KP+
Sbjct: 255 LSVYTKPY 262
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LNIYVKPH 10
L++Y KP+
Sbjct: 255 LSVYTKPY 262
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 3 LNIYVKPH 10
L++Y KP+
Sbjct: 255 LSVYTKPY 262
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 3 LNIYVKPH 10
L++Y KP+
Sbjct: 255 LSVYTKPY 262
21|SequenceR|110|101|GTKTEKDLNI
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 2 TKTEKDLNI 10
TK +KDLN+
Sbjct: 633 TKFDKDLNL 641
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 GTKTEKDL 8
GT TE++L
Sbjct: 365 GTNTEREL 372
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 4 TEKDLNI 10
TEKDL++
Sbjct: 1444 TEKDLDL 1450
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 KTEKDLNI 10
+ E+DLNI
Sbjct: 1453 QIERDLNI 1460
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 2 TKTEKDL 8
TKTEK+L
Sbjct: 33 TKTEKEL 39
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 2 TKTEKDL 8
TKTEK+L
Sbjct: 33 TKTEKEL 39
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 KTEKDLNI 10
K EK+LN+
Sbjct: 1450 KIEKELNL 1457
22|SequenceR|115|106|CYGCTGTKTE
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 YGCTGTKT 9
YG GTKT
Sbjct: 1997 YGVEGTKT 2004
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 YGCTGTKT 9
YG GTKT
Sbjct: 1997 YGVEGTKT 2004
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 YGCTGTKT 9
YG GTKT
Sbjct: 1997 YGVEGTKT 2004
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 YGCTGTKT 9
YG GTKT
Sbjct: 1997 YGVEGTKT 2004
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 YGCTGTKT 9
YG GTKT
Sbjct: 1992 YGVEGTKT 1999
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 YGCTGTKT 9
YG GTKT
Sbjct: 1997 YGIEGTKT 2004
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 YGCTGTKT 9
YG GTKT
Sbjct: 1997 YGIEGTKT 2004
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 YGCTGTKT 9
YG GTKT
Sbjct: 1997 YGIEGTKT 2004
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 YGCTGTKT 9
YG GTKT
Sbjct: 1997 YGIEGTKT 2004
>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CYGCTGT 7
C GC GT
Sbjct: 79 CIGCKGT 85
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 CYGCTGT 7
C+ C GT
Sbjct: 472 CHSCIGT 478
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 2 YGCTGTK 8
+ C+GTK
Sbjct: 561 FACSGTK 567
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 YGCTGTK 8
+ C+GTK
Sbjct: 561 FACSGTK 567
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CYGCTGTKTE 10
CY TGT +
Sbjct: 1384 CYVITGTSAD 1393
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CYGCTGTKTE 10
CY TGT +
Sbjct: 1384 CYVITGTSAD 1393
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CYGCTGTKTE 10
CY TGT +
Sbjct: 1384 CYVITGTSAD 1393
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CYGCTGTKTE 10
CY TGT +
Sbjct: 1384 CYVITGTSAD 1393
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CYGCTGTKTE 10
CY TGT +
Sbjct: 1384 CYVITGTSAD 1393
>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CYGCTGTK 8
C+GC G +
Sbjct: 130 CFGCVGAR 137
>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CYGCTGT 7
C+G GT
Sbjct: 119 CWGSNGT 125
>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CYGCTGT 7
C+G GT
Sbjct: 118 CWGSNGT 124
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 GCTGT 7
GC+GT
Sbjct: 1978 GCSGT 1982
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 YGCTGTKTE 10
+G GT+TE
Sbjct: 268 FGFNGTRTE 276
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2021 GCSGT 2025
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 GCTGT 7
GC+GT
Sbjct: 2034 GCSGT 2038
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2034 GCSGT 2038
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2021 GCSGT 2025
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2021 GCSGT 2025
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2021 GCSGT 2025
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2006 GCSGT 2010
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 GCTGT 7
GC+GT
Sbjct: 1985 GCSGT 1989
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2021 GCSGT 2025
>sp|VU51_HHV6U|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6A (strain
Query: 1 CYGCTGTKTE 10
C+ CT + E
Sbjct: 281 CFSCTRREKE 290
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 GCTGT 7
GC+GT
Sbjct: 1985 GCSGT 1989
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 GCTGT 7
GC+GT
Sbjct: 1981 GCSGT 1985
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2007 GCSGT 2011
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2019 GCSGT 2023
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2033 GCSGT 2037
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2037 GCSGT 2041
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2037 GCSGT 2041
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2024 GCSGT 2028
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2029 GCSGT 2033
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2021 GCSGT 2025
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2015 GCSGT 2019
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2035 GCSGT 2039
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2012 GCSGT 2016
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2012 GCSGT 2016
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2022 GCSGT 2026
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2010 GCSGT 2014
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2031 GCSGT 2035
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 GCTGT 7
GC+GT
Sbjct: 2042 GCSGT 2046
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 GCTGT 7
GC+GT
Sbjct: 2011 GCSGT 2015
23|SequenceR|124|111|HHHQRFQLGCYGCT
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 2 HHQRFQLGCYGCT 14
+HQR +L YG T
Sbjct: 123 YHQRVRLDTYGGT 135
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 HHHQRFQLGCY 11
H H ++++ CY
Sbjct: 724 HEHAQYKINCY 734
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 HHHQRFQLGCY 11
H H ++++ CY
Sbjct: 724 HEHAQYKINCY 734
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 2 HHQRFQLGCYGCT 14
+HQR +L YG T
Sbjct: 123 YHQRVRLDTYGGT 135
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 2 HHQRFQLGCYGCT 14
+HQR +L YG T
Sbjct: 123 YHQRVRLDTYGGT 135
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 1 HHHQRFQLGCY 11
H H ++++ CY
Sbjct: 724 HEHVQYKINCY 734
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 1 HHHQRFQLGCY 11
H H ++++ CY
Sbjct: 724 HEHVQYKINCY 734
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 1 HHHQRFQLGCY 11
H H ++++ CY
Sbjct: 724 HEHVQYKINCY 734
>sp|US13_HCMVM|MEMBRANE protein US13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HHQRFQLGCYG 12
HHQR L YG
Sbjct: 176 HHQRILLYGYG 186
>sp|US13_HCMVA|UNCHARACTERIZED protein HVLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HHQRFQLGCYG 12
HHQR L YG
Sbjct: 176 HHQRILLYGYG 186
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 9 GCYGCT 14
GC+GC+
Sbjct: 78 GCWGCS 83
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)
Query: 9 GCYGCT 14
GC+GC+
Sbjct: 77 GCWGCS 82
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 HHQRFQLGCY 11
+H RF++G Y
Sbjct: 892 YHWRFKVGVY 901
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 HHQRFQLGCY 11
+H RF++G Y
Sbjct: 892 YHWRFKVGVY 901
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 1 HHHQRFQLGCY 11
+HH R+ G Y
Sbjct: 590 YHHDRYIQGVY 600
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 9 GCYGCT 14
GC GCT
Sbjct: 905 GCVGCT 910
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HHHQRFQL 8
H+H+R+Q+
Sbjct: 159 HNHRRWQV 166
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HHHQRFQL 8
H+H+R+Q+
Sbjct: 159 HNHRRWQV 166
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 2 HHQRFQLGCYG 12
+HQ+ +L YG
Sbjct: 127 YHQQIRLQTYG 137
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 QRFQLGCYGCT 14
Q F+L C+G T
Sbjct: 267 QLFRLRCHGWT 277
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 QRFQLGCYGCT 14
Q F+L C+G T
Sbjct: 267 QLFRLRCHGWT 277
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 9 GCYGCT 14
GCY C+
Sbjct: 1454 GCYACS 1459
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 9 GCYGCT 14
G YGCT
Sbjct: 548 GWYGCT 553
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 9 GCYGCT 14
GC+ CT
Sbjct: 1311 GCFSCT 1316
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 HHHQRFQLGCYGC 13
H R GC GC
Sbjct: 342 HKPDRELTGCTGC 354
Query: 9 GCYGC 13
GCY C
Sbjct: 921 GCYSC 925
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 9 GCYGC 13
GCY C
Sbjct: 1157 GCYSC 1161
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 9 GCYGC 13
GCY C
Sbjct: 138 GCYHC 142
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 9 GCYGC 13
GCY C
Sbjct: 138 GCYHC 142
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 9 GCYGC 13
GCY C
Sbjct: 138 GCYHC 142
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 9 GCYGC 13
GCY C
Sbjct: 138 GCYHC 142
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 9 GCYGC 13
GCY C
Sbjct: 138 GCYHC 142
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 9 GCYGC 13
GCY C
Sbjct: 1038 GCYSC 1042
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 HHQRFQLGC 10
HH +++L C
Sbjct: 420 HHDQWKLAC 428
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HHQRFQLGC 10
HH +++L C
Sbjct: 420 HHDQWKLAC 428
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HHQRFQLGC 10
HH +++L C
Sbjct: 420 HHDQWKLAC 428
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 9 GCYGC 13
GCY C
Sbjct: 917 GCYSC 921
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 9 GCYGC 13
GCY C
Sbjct: 1038 GCYSC 1042
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 HHQRFQLGCYGC 13
H + +GCYG
Sbjct: 583 HFMGYVIGCYGS 594
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 HHQRFQLGCYGC 13
H + +GCYG
Sbjct: 583 HFMGYVIGCYGS 594
>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 HHQRFQLGCYG 12
+HQ+ +L YG
Sbjct: 127 YHQQIRLETYG 137
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 9 GCYGC 13
GC GC
Sbjct: 1033 GCQGC 1037
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 9 GCYGC 13
GC GC
Sbjct: 1033 GCQGC 1037
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 9 GCYGC 13
GC GC
Sbjct: 1033 GCQGC 1037
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 9 GCYGC 13
GC GC
Sbjct: 1033 GCQGC 1037
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 9 GCYGC 13
GC GC
Sbjct: 1033 GCQGC 1037
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 9 GCYGC 13
GC GC
Sbjct: 1033 GCQGC 1037
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 9 GCYGC 13
GC GC
Sbjct: 1033 GCQGC 1037
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 9 GCYGC 13
GC GC
Sbjct: 1033 GCQGC 1037
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 9 GCYGC 13
GC GC
Sbjct: 1033 GCQGC 1037
THE END