NDUS6_HUMAN Blast Output
Archaea
1|Sequence|1|10|MAAAMTFCRL

***** No hits found ******


2|Sequence|6|15|TFCRLLNRCG

>sp|PDXT_METMA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina mazei (strain

Query: 1 TFCRLLNRCG 10
T CRLL R G
Sbjct: 56 TLCRLLAREG 65


>sp|PDXT_METBF|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina barkeri (strain

Query: 1 TFCRLLNRCG 10
T CRLL R G
Sbjct: 56 TLCRLLAREG 65


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi

Query: 3 CRLLNRCG 10
CR RCG
Sbjct: 61 CRYFGRCG 68


>sp|PDXT_METAC|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina acetivorans

Query: 1 TFCRLLNRCG 10
T CRLL R G
Sbjct: 56 TLCRLLAREG 65


>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FCRLLNRCG 10
FCR+L R G
Sbjct: 22 FCRILARRG 30


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 3 CRLLNRCG 10
C++ RCG
Sbjct: 61 CKVFGRCG 68


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FCRLLNRCG 10
F R+L CG
Sbjct: 192 FLRILQECG 200


>sp|PURK_SACS2|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide synthase|Saccharolobus solfataricus (strain ATCC

Query: 3 CRLLNRC 9
CR+ +RC
Sbjct: 46 CRIADRC 52


>sp|Y1614_METAC|MACRO domain-containing protein MA_1614|Methanosarcina acetivorans

Query: 3 CRLLNRC 9
CR LN C
Sbjct: 74 CRTLNGC 80




3|Sequence|11|20|LNRCGEAARS

>sp|Y1450_METJA|UNCHARACTERIZED protein MJ1450|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NRCGEAAR 9
N+CGE AR
Sbjct: 120 NKCGECAR 127


>sp|NK_METTH|NUCLEOSIDE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 RCGEAARS 10
RCGE ARS
Sbjct: 148 RCGEFARS 155


>sp|DHYS1_ARCFU|PROBABLE deoxyhypusine synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LNRCGEA 7
L+RCGE+
Sbjct: 295 LDRCGES 301


>sp|KAE1_PYRAR|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum arsenaticum

Query: 1 LNRCGEAA 8
+ RCGE+A
Sbjct: 177 VERCGESA 184


>sp|Y182_ARCFU|UNCHARACTERIZED protein AF_0182|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RCGEAARS 10
RCG ARS
Sbjct: 29 RCGYRARS 36


>sp|PYRH_METMA|URIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 CGEAAR 9
CGEAA+
Sbjct: 214 CGEAAK 219




4|Sequence|16|25|EAARSLPLGA

>sp|RS4E_METMA|SMALL ribosomal subunit protein eS4|Methanosarcina mazei (strain ATCC

Query: 3 ARSLPLG 9
ARSLPLG
Sbjct: 34 ARSLPLG 40


>sp|RS4E_METBF|SMALL ribosomal subunit protein eS4|Methanosarcina barkeri (strain

Query: 3 ARSLPLG 9
ARSLPLG
Sbjct: 34 ARSLPLG 40


>sp|RS4E_METAC|SMALL ribosomal subunit protein eS4|Methanosarcina acetivorans (strain

Query: 3 ARSLPLG 9
ARSLPLG
Sbjct: 34 ARSLPLG 40


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 1 EAARSLPL 8
+AAR+LPL
Sbjct: 138 DAARNLPL 145


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EAARSLPLGA 10
EAA LPLG
Sbjct: 113 EAAEPLPLGT 122


>sp|GGGPS_CENSY|GERANYLGERANYLGLYCERYL phosphate synthase|Cenarchaeum symbiosum (strain A)

Query: 2 AARSLPLG 9
AAR +PLG
Sbjct: 144 AARGIPLG 151


>sp|FER_THELI|FERREDOXIN litoralis

Query: 1 EAARSLPLGA 10
EAA S P GA
Sbjct: 46 EAAESCPTGA 55


>sp|RL14_THEVO|LARGE ribosomal subunit protein uL14|Thermoplasma volcanium (strain

Query: 4 RSLPLGA 10
R LPLGA
Sbjct: 10 RGLPLGA 16


>sp|RL14_PICTO|LARGE ribosomal subunit protein uL14|Picrophilus torridus (strain ATCC

Query: 4 RSLPLGA 10
R LPLGA
Sbjct: 10 RGLPLGA 16




5|Sequence|21|30|LPLGARCFGV

>sp|HMEA_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 PLGARCF 8
P GARCF
Sbjct: 161 PYGARCF 167


>sp|RL14_METJA|LARGE ribosomal subunit protein uL14|Methanocaldococcus jannaschii

Query: 1 LPLGARC 7
LP+GARC
Sbjct: 12 LPVGARC 18


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 4 GARCFGV 10
G +CFGV
Sbjct: 131 GTKCFGV 137


>sp|PFDA_METST|PREFOLDIN subunit alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LPLGARCF 8
+P+GA CF
Sbjct: 58 VPIGAGCF 65


>sp|IDI2_AERPE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 3 LGARCFGV 10
LG RCF V
Sbjct: 209 LGVRCFDV 216


>sp|HFLX_SACS2|GTPASE HflX|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PLGARCFGV 10
PLGA +GV
Sbjct: 134 PLGAGTYGV 142


>sp|Y1492_METJA|UNCHARACTERIZED protein MJ1492|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 ARCFGV 10
ARCFG+
Sbjct: 69 ARCFGI 74


>sp|Y1164_METJA|PUTATIVE HTH-type transcriptional regulatory protein|Methanocaldococcus

Query: 2 PLGARCF 8
PLG CF
Sbjct: 26 PLGRSCF 32


>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 1 LPLGARCFGV 10
LP +R FG+
Sbjct: 313 LPFASRLFGI 322


>sp|IDI2_META3|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LPLGARCFGV 10
+ +GA+C GV
Sbjct: 291 MAIGAQCCGV 300


>sp|COXX2_CENSY|PROTOHEME IX farnesyltransferase 2|Cenarchaeum symbiosum (strain A)

Query: 2 PLGARCFGV 10
P GAR FG+
Sbjct: 93 PAGARNFGL 101


>sp|PIMT_METMJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LPLGARCF 8
+PLG CF
Sbjct: 198 IPLGGVCF 205




6|Sequence|26|35|RCFGVRVSPT

>sp|AMT2_ARCFU|AMMONIUM transporter Amt2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RCFGVRVSP 9
+ G+RVSP
Sbjct: 423 KVIGIRVSP 431




7|Sequence|31|40|RVSPTGEKVT

>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VSPTGEKVT 10
V+PTGE +T
Sbjct: 193 VAPTGENIT 201


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 RVSPTGEKVT 10
RVSPTG K+
Sbjct: 950 RVSPTGVKLA 959


>sp|GFPS_METMA|GERANYLFARNESYL diphosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VSPTGEKV 9
+SP GEKV
Sbjct: 129 ISPYGEKV 136


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RVSPTGEKV 9
++SP+G KV
Sbjct: 107 KISPSGRKV 115


Query: 1 RVSPTGEKV 9
+VSP G+KV
Sbjct: 426 KVSPDGKKV 434


>sp|PGK_THEVO|PHOSPHOGLYCERATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VSPTGEKVT 10
+SP+GE+V+
Sbjct: 282 LSPSGERVS 290


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RVSPTGEKV 9
RVSP GE +
Sbjct: 514 RVSPLGENI 522


>sp|GGR_METJA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SPTGEKVT 10
SP+G+KVT
Sbjct: 78 SPSGKKVT 85


>sp|HEM1_METTP|GLUTAMYL-TRNA reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 VSPTGEKV 9
VSP GEKV
Sbjct: 57 VSPRGEKV 64


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 RVSPTGEKV 9
+VSP G+K+
Sbjct: 211 KVSPDGKKI 219


>sp|Y516_AERPE|UPF0113 protein APE_0516.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 RVSPTGEKV 9
R+SP GEK+
Sbjct: 108 RLSPRGEKL 116


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VSPTGEKV 9
+SPTG KV
Sbjct: 67 ISPTGSKV 74


>sp|RNP1_METS3|RIBONUCLEASE P protein component 1|Methanobrevibacter smithii (strain ATCC

Query: 4 PTGEKV 9
PTGEKV
Sbjct: 65 PTGEKV 70


>sp|Y1254_METJA|UNCHARACTERIZED protein MJ1254|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VSPTGEKVT 10
V+P+G K+T
Sbjct: 196 VTPSGYKIT 204


>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VSPTGEKVT 10
V+P G+K+T
Sbjct: 77 VAPNGKKIT 85




8|Sequence|36|45|GEKVTHTGQV

>sp|DCDA_THEAC|DIAMINOPIMELATE decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GEKVTHTGQV 10
GEK+T TGQ+
Sbjct: 323 GEKITVTGQI 332


>sp|Y1798_ARCFU|PUTATIVE phosphate permease AF_1798|Archaeoglobus fulgidus (strain ATCC

Query: 1 GEKVTHT 7
G+KVTHT
Sbjct: 58 GKKVTHT 64


>sp|MER_METJA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GEKVTHTGQV 10
GE+V++ G+V
Sbjct: 127 GERVSYEGKV 136


>sp|Y1724_ARCFU|UNCHARACTERIZED protein AF_1724|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KVTHTG 8
+VTHTG
Sbjct: 150 RVTHTG 155


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GEKVTHTG 8
GE+V H G
Sbjct: 39 GEEVVHVG 46


>sp|GLNB2_METTM|NITROGEN fixation nifHD region GlnB-like|Methanothermobacter marburgensis

Query: 3 KVTHTGQV 10
KV HTG++
Sbjct: 88 KVNHTGKI 95


>sp|COME_METJA|SULFOPYRUVATE decarboxylase subunit beta|Methanocaldococcus jannaschii (strain

Query: 1 GEKVTHTGQ 9
G + THTG+
Sbjct: 108 GNQKTHTGK 116




9|Sequence|41|50|HTGQVYDDKD

>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 HTGQVYDDKD 10
HTG V+DD +
Sbjct: 84 HTGMVFDDAE 93


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 VYDDKD 10
+YDDKD
Sbjct: 144 IYDDKD 149


>sp|ILVC_METS5|KETOL-ACID reductoisomerase (NAD(P)(+))|Metallosphaera sedula (strain ATCC

Query: 1 HTGQVYDDKD 10
H ++Y DKD
Sbjct: 3 HIAKIYTDKD 12


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 HTGQVYDDKD 10
HTGQ D KD
Sbjct: 183 HTGQEGDSKD 192


>sp|PYRH_PYRCJ|URIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 TGQVYDDKD 10
TG+++D++D
Sbjct: 7 TGRIFDEED 15


>sp|PGK_METFV|PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 1 HTGQVYDD 8
HTG++ DD
Sbjct: 30 HTGRILDD 37


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HTGQVYDDK 9
+TG++ DDK
Sbjct: 30 NTGEILDDK 38


>sp|Y912_METJA|UNCHARACTERIZED protein MJ0912|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HTGQVYDDKD 10
H G++Y D+D
Sbjct: 169 HEGKIYLDED 178


>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 HTGQVYDDKD 10
H G V+DD +
Sbjct: 84 HIGVVFDDAE 93


>sp|TBP_THEVO|TATA-BOX-BINDING protein|Thermoplasma volcanium (strain ATCC 51530

Query: 4 QVYDDKD 10
+VYDD D
Sbjct: 91 EVYDDPD 97


>sp|PRIL_SACS2|DNA primase large subunit PriL|Saccharolobus solfataricus (strain ATCC

Query: 1 HTGQVYDDKD 10
H G VY DK+
Sbjct: 164 HKGYVYLDKN 173


>sp|ILVC_SACI2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 TGQVYDDKD 10
T ++Y DKD
Sbjct: 4 TSKIYTDKD 12


>sp|ILVC_SACI6|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 TGQVYDDKD 10
T ++Y DKD
Sbjct: 4 TSKIYTDKD 12


>sp|ILVC_SACI4|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 TGQVYDDKD 10
T ++Y DKD
Sbjct: 4 TSKIYTDKD 12


>sp|ILVC_SACI3|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 TGQVYDDKD 10
T ++Y DKD
Sbjct: 4 TSKIYTDKD 12


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 QVYDDKD 10
+VYDD D
Sbjct: 647 EVYDDDD 653


>sp|ILVC_SACI7|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 TGQVYDDKD 10
T ++Y DKD
Sbjct: 4 TSKIYTDKD 12


>sp|ILVC_SACI1|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 TGQVYDDKD 10
T ++Y DKD
Sbjct: 4 TSKIYTDKD 12


>sp|CDC61_SULAC|ORC1-TYPE DNA replication protein 1|Sulfolobus acidocaldarius (strain ATCC

Query: 2 TGQVYD 7
TG+VYD
Sbjct: 318 TGEVYD 323


>sp|CDC61_SULTO|ORC1-TYPE DNA replication protein 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TGQVYD 7
TG+VYD
Sbjct: 319 TGEVYD 324


>sp|AROA_METLZ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 2 TGQVYDDKD 10
+GQVY +D
Sbjct: 220 SGQVYSSED 228


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19

Query: 1 HTGQVYDDKD 10
H G++Y +KD
Sbjct: 38 HEGRLYLEKD 47


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 2 TGQVYDDKD 10
TG+ Y+D D
Sbjct: 368 TGRAYEDPD 376


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 3 GQVYDDKD 10
G+VY+D D
Sbjct: 221 GEVYEDYD 228


>sp|Y811_METJA|UNCHARACTERIZED protein MJ0811|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HTGQVYDDKD 10
H+G +Y D++
Sbjct: 280 HSGSMYGDRE 289




10|Sequence|46|55|YDDKDYRRIR

>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YDDKDYRRIR 10
Y+DKDY R
Sbjct: 96 YEDKDYNEYR 105


>sp|GGGPS_METM6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 2 DDKDYRRI 9
D+K+YR+I
Sbjct: 30 DEKNYRKI 37


>sp|COBQ_METM6|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C6 /

Query: 1 YDDKDYRRIR 10
Y+D+DY R
Sbjct: 96 YEDRDYNEYR 105


>sp|COBQ_METM5|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C5 /

Query: 1 YDDKDYRRIR 10
Y+D+DY R
Sbjct: 96 YEDRDYNEYR 105


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 3 DKDYRRIR 10
DKDY R+R
Sbjct: 96 DKDYGRLR 103


>sp|Y1508_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 DKDYRRIR 10
DK YRR R
Sbjct: 114 DKSYRRKR 121


>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 1 YDDKDYRRIR 10
Y+D+DY R
Sbjct: 96 YEDRDYNEYR 105


>sp|GGGPS_METMP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DDKDYRRI 9
D+K+YR I
Sbjct: 30 DEKNYREI 37


>sp|GGGPS_METM7|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 2 DDKDYRRI 9
D+K+YR I
Sbjct: 30 DEKNYREI 37


>sp|GGGPS_METM5|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 2 DDKDYRRI 9
D+K+YR I
Sbjct: 30 DEKNYREI 37


>sp|DHOM_METJA|HOMOSERINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDDKDY 6
YD KDY
Sbjct: 20 YDKKDY 25


>sp|AATC_HALWD|A-TYPE ATP synthase subunit C|Haloquadratum walsbyi (strain DSM 16790

Query: 1 YDDKDYRRI 9
YDD++YR++
Sbjct: 23 YDDEEYRKL 31


>sp|FLPA_METKA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanopyrus kandleri (strain

Query: 1 YDDKDYR 7
YD K+YR
Sbjct: 46 YDGKEYR 52


>sp|PIMT_METKA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 DDKDYRRIR 10
DDK +RR R
Sbjct: 4 DDKVFRRAR 12


>sp|Y1246_PYRAB|UNCHARACTERIZED protein PYRAB12460|Pyrococcus abyssi (strain GE5 /

Query: 1 YDDKDY 6
YD KDY
Sbjct: 116 YDTKDY 121




11|Sequence|51|60|YRRIRFVGRQ

>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 3 RIRFVGR 9
RIRFVG+
Sbjct: 247 RIRFVGQ 253


>sp|SMC_METJA|CHROMOSOME partition protein Smc|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YRRIRFV 7
YR++RFV
Sbjct: 639 YRKVRFV 645


>sp|G3P1_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 RIRFVGR 9
RIRF+G+
Sbjct: 247 RIRFIGQ 253


>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 3 RIRFVGR 9
R+RFVG+
Sbjct: 247 RVRFVGQ 253


>sp|G3P2_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 RIRFVGR 9
R+RFVG+
Sbjct: 247 RVRFVGQ 253


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YRRIRFVGR 9
YRRI VG+
Sbjct: 1069 YRRIPLVGK 1077


>sp|CBIX_SACS2|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RRIRFVGRQ 10
++IR++GR+
Sbjct: 89 KKIRYMGRE 97


>sp|AATB_METJA|A-TYPE ATP synthase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 3 RIRFVGR 9
R+RF GR
Sbjct: 74 RVRFTGR 80


>sp|ACYP_THEVO|ACYLPHOSPHATASE volcanium (strain ATCC 51530

Query: 2 RRIRFVGR 9
RR+RF GR
Sbjct: 5 RRVRFYGR 12


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 YRRIRFVGR 9
+RR+R VGR
Sbjct: 200 FRRLRDVGR 208


>sp|IF2P_PYRNV|PROBABLE translation initiation factor IF-2|Pyrobaculum neutrophilum (strain

Query: 1 YRRIRFVGRQ 10
Y R+R GRQ
Sbjct: 184 YDRVRDFGRQ 193




12|Sequence|56|65|FVGRQKEVNE

>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 1 FVGRQKEVNE 10
F R+KE+NE
Sbjct: 3 FFNREKEINE 12


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FVGRQKEVNE 10
F+G +KE+ E
Sbjct: 471 FIGSRKEIEE 480


>sp|Y326_METJA|PUTATIVE permease MJ0326|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FVGRQKEVN 9
F GR KEV+
Sbjct: 409 FTGRWKEVH 417


>sp|MCR_SULTO|MALONYL-COA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VGRQKEVNE 10
VGR K+VN+
Sbjct: 316 VGRLKQVNK 324


>sp|ARGB_METLZ|ACETYLGLUTAMATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FVGRQKEVN 9
FVG KE+N
Sbjct: 150 FVGDVKEIN 158


>sp|MCR_METS5|MALONYL CoA reductase (NADP)|Metallosphaera sedula (strain ATCC 51363

Query: 2 VGRQKEVN 9
VGR K+VN
Sbjct: 313 VGRLKQVN 320


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 1 FVGRQKEVNE 10
F R+KE+N+
Sbjct: 3 FFNREKEINK 12


>sp|Y821_METJA|PUTATIVE uncharacterized protein MJ0821|Methanocaldococcus jannaschii

Query: 1 FVGRQKEVNE 10
F R+KE+N+
Sbjct: 3 FFNREKEINK 12


>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii (strain

Query: 1 FVGRQKEV 8
+VGR+KE+
Sbjct: 174 YVGREKEI 181


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FVGRQKEVNE 10
FVG +KE+ +
Sbjct: 471 FVGSRKEIED 480




13|Sequence|61|70|KEVNENFAID

>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KEVNENFAI 9
KEVN+N AI
Sbjct: 76 KEVNKNIAI 84


>sp|Y1632_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 2 EVNENFAID 10
EVNEN+ +D
Sbjct: 73 EVNENYKLD 81


>sp|IDI2_META3|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KEVNENFAI 9
KE+N+N AI
Sbjct: 75 KEINKNIAI 83


>sp|FER3_METJA|UNCHARACTERIZED ferredoxin MJ0146|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EVNENFA 8
E+NENF
Sbjct: 4 EINENFC 10


>sp|CARA_ARCFU|CARBAMOYL phosphate synthase small chain|Archaeoglobus fulgidus (strain ATCC

Query: 4 NENFAID 10
N NFA+D
Sbjct: 291 NHNFAVD 297




14|Sequence|66|75|NFAIDLIAEQ

>sp|IF6_METBU|TRANSLATION initiation factor 6|Methanococcoides burtonii (strain DSM 6242

Query: 3 AIDLIAEQ 10
AIDL+AEQ
Sbjct: 34 AIDLLAEQ 41


>sp|SYS_NITMS|SERINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 NFAIDLIAEQ 10
+FA+D +AE+
Sbjct: 178 HFALDFLAEK 187




15|Sequence|71|80|LIAEQPVSEV

>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LIAEQPVSEV 10
+IAE PV+E+
Sbjct: 664 IIAEAPVAEM 673


>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 1 LIAEQPVSEV 10
+IAE PV+E+
Sbjct: 664 IIAEAPVAEM 673


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 1 LIAEQPVSEV 10
+IAE PV+E+
Sbjct: 664 IIAEAPVAEM 673


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LIAEQPVSEV 10
+IAE PV+E+
Sbjct: 664 IIAEAPVAEM 673


>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 2 IAEQPVSE 9
+AEQP+ E
Sbjct: 70 LAEQPIRE 77


>sp|TRM56_THEVO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma volcanium

Query: 2 IAEQPVSEV 10
+ QP+SEV
Sbjct: 123 VTNQPISEV 131


>sp|TRM56_THEAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma acidophilum

Query: 2 IAEQPVSEV 10
+ QP+SEV
Sbjct: 123 VTNQPISEV 131


>sp|DCDA_METTH|DIAMINOPIMELATE decarboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LIAEQPVSE 9
L+AE+P+ E
Sbjct: 330 LVAERPLDE 338


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 LIAEQPVSE 9
+IAE PVSE
Sbjct: 667 VIAEIPVSE 675


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 LIAEQPVSE 9
+IAE PVSE
Sbjct: 669 VIAEIPVSE 677


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 2 IAEQPVSEV 10
+ E+PVSE+
Sbjct: 160 LKEEPVSEI 168




16|Sequence|76|85|PVSEVETRVI

>sp|MDH_METTH|MALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 VSEVETRVI 10
VSEV TRVI
Sbjct: 166 VSEVHTRVI 174


>sp|RS2_IGNH4|SMALL ribosomal subunit protein uS2|Ignicoccus hospitalis (strain KIN4/I

Query: 1 PVSEVETRV 9
PVSE ET+V
Sbjct: 201 PVSEFETKV 209


>sp|MDH_METTM|MALATE dehydrogenase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 VSEVETRVI 10
VSEV TRVI
Sbjct: 166 VSEVHTRVI 174


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVSEVETRVI 10
P+S +E RV+
Sbjct: 271 PISRMEGRVV 280


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 PVSEVETRV 9
P++EVE R+
Sbjct: 322 PIAEVEKRL 330


>sp|WTPC_PYRFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus furiosus (strain ATCC

Query: 1 PVSEVETRVI 10
P SE+E RV+
Sbjct: 103 PRSEIEKRVL 112


>sp|NNR_KORCO|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Korarchaeum cryptofilum (strain

Query: 1 PVSEVETRVI 10
PV+E+E R I
Sbjct: 384 PVAEIERRKI 393


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PVSEVETRV 9
P++E+ET +
Sbjct: 270 PINEIETNI 278


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PVSEVETRVI 10
PV E+E +V+
Sbjct: 647 PVDEIEEKVV 656


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PVSEVET 7
PV+E+ET
Sbjct: 173 PVNEIET 179


>sp|MDH_METKA|MALATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 VSEVETRVI 10
+SEV TR+I
Sbjct: 167 MSEVHTRII 175




17|Sequence|81|90|ETRVIACDGG

>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii (strain

Query: 4 VIACDGG 10
+I CDGG
Sbjct: 403 IIYCDGG 409


>sp|MTNA_ARCFU|PUTATIVE methylthioribose-1-phosphate isomerase|Archaeoglobus fulgidus

Query: 1 ETRVIACD 8
E RVIAC+
Sbjct: 178 EIRVIACE 185


>sp|NUCS1_HALSA|ENDONUCLEASE NucS 1|Halobacterium salinarum (strain ATCC 700922

Query: 5 IACDGG 10
+ACDGG
Sbjct: 89 VACDGG 94


>sp|CYDE_METJA|L-CYSTEINE desulfidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 IACDGG 10
I CDGG
Sbjct: 320 IVCDGG 325


>sp|LYSZ_IGNH4|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Ignicoccus hospitalis

Query: 2 TRVIACDG 9
T+V+ CDG
Sbjct: 238 TKVVICDG 245


>sp|CYDE_METM7|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C7 /

Query: 5 IACDGG 10
I CDGG
Sbjct: 328 IICDGG 333


>sp|CYDE_METM5|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C5 /

Query: 5 IACDGG 10
I CDGG
Sbjct: 328 IICDGG 333


>sp|Y504_METJA|UNCHARACTERIZED protein MJ0504|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ETRVIACDGG 10
E ++ACD G
Sbjct: 132 EITIMACDAG 141


>sp|AATE_HALSA|A-TYPE ATP synthase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 ETRVIACDG 9
E R++A DG
Sbjct: 90 EDRIVALDG 98


>sp|AATE_HALS3|A-TYPE ATP synthase subunit E|Halobacterium salinarum (strain ATCC 29341

Query: 1 ETRVIACDG 9
E R++A DG
Sbjct: 90 EDRIVALDG 98


>sp|CYDE_METMP|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain DSM 14266

Query: 5 IACDGG 10
I CDGG
Sbjct: 327 IICDGG 332


>sp|GUAAB_PICTO|GMP synthase [glutamine-hydrolyzing] subunit B|Picrophilus torridus

Query: 4 VIACDGG 10
++AC GG
Sbjct: 23 ILACSGG 29


>sp|CYDE_METM6|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C6 /

Query: 5 IACDGG 10
I CDGG
Sbjct: 328 IICDGG 333


>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 VIACDGG 10
+IAC GG
Sbjct: 233 IIACAGG 239


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 VIACDGG 10
+IAC GG
Sbjct: 233 IIACAGG 239


>sp|PSB_METTP|PROTEASOME subunit beta|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 IACDGG 10
I CDGG
Sbjct: 13 IVCDGG 18




18|Sequence|86|95|ACDGGGGALG

>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 DGGGGALG 10
DGGGG LG
Sbjct: 465 DGGGGQLG 472


>sp|VORB_PYRFU|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus furiosus (strain ATCC

Query: 1 ACDGGGGALG 10
AC G G +LG
Sbjct: 25 ACQGCGASLG 34


>sp|VORB_PYRAB|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus abyssi (strain GE5 /

Query: 1 ACDGGGGALG 10
AC G G +LG
Sbjct: 25 ACQGCGASLG 34


>sp|VORB_PYRHO|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus horikoshii (strain ATCC

Query: 1 ACDGGGGALG 10
AC G G +LG
Sbjct: 25 ACQGCGASLG 34


>sp|RPIA_PICTO|RIBOSE-5-PHOSPHATE isomerase A|Picrophilus torridus (strain ATCC 700027

Query: 4 GGGGAL 9
GGGGAL
Sbjct: 94 GGGGAL 99


>sp|MTNA_METST|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosphaera stadtmanae

Query: 1 ACDGGGGALG 10
AC G G ALG
Sbjct: 144 ACAGYGTALG 153


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DGGGGAL 9
DGG GAL
Sbjct: 56 DGGDGAL 62


>sp|TRUD_NATPD|PROBABLE tRNA pseudouridine synthase D|Natronomonas pharaonis (strain ATCC

Query: 2 CDGGGGALG 10
CD GGG G
Sbjct: 162 CDFGGGEAG 170


>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ACDGGGGALG 10
AC GGG G
Sbjct: 244 ACVGGGSNFG 253


>sp|RPIA_THEVO|RIBOSE-5-PHOSPHATE isomerase A|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GGGGAL 9
GGGGAL
Sbjct: 98 GGGGAL 103


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DGGGG 7
DGGGG
Sbjct: 10 DGGGG 14


>sp|UVRC_NATPD|UVRABC system protein C|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DGGGGALG 10
DGG G LG
Sbjct: 449 DGGDGQLG 456


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 DGGGGAL 9
DGG GAL
Sbjct: 393 DGGHGAL 399


>sp|TRPB1_AERPE|TRYPTOPHAN synthase beta chain 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 ACDGGGGALG 10
AC GGG G
Sbjct: 254 ACVGGGSNFG 263


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 3 DGGGGALG 10
DGG G LG
Sbjct: 453 DGGDGQLG 460


>sp|RPIA_THEAC|RIBOSE-5-PHOSPHATE isomerase A|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GGGGAL 9
GGGGAL
Sbjct: 98 GGGGAL 103




19|Sequence|91|100|GGALGHPKVY

>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGALGHP 7
GGA GHP
Sbjct: 55 GGAFGHP 61


>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GALGHPKVY 10
G +G+PKVY
Sbjct: 49 GRVGYPKVY 57


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 1 GGALGHP 7
GG LGHP
Sbjct: 392 GGTLGHP 398


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 1 GGALGHP 7
GG LGHP
Sbjct: 392 GGTLGHP 398


>sp|PSB1_CENSY|PROTEASOME subunit beta 1|Cenarchaeum symbiosum (strain A)

Query: 1 GGALGHPKVY 10
GG +G P +Y
Sbjct: 105 GGVVGEPAIY 114


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGALGHP 7
GG LGHP
Sbjct: 389 GGVLGHP 395


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 4 LGHPKVY 10
GHP+VY
Sbjct: 292 FGHPEVY 298


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 ALGHPKV 9
A+GHP++
Sbjct: 866 AMGHPEI 872


>sp|AOX1_AERPE|HEME-COPPER oxidase subunit I+III|Aeropyrum pernix (strain ATCC 700893

Query: 4 LGHPKVY 10
GHP+VY
Sbjct: 246 FGHPEVY 252


>sp|RS24_METS3|SMALL ribosomal subunit protein eS24|Methanobrevibacter smithii (strain

Query: 3 ALGHPKVY 10
ALG+ KVY
Sbjct: 65 ALGYAKVY 72


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GGALGHP 7
GG +GHP
Sbjct: 368 GGVMGHP 374


>sp|WTPA_METJA|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LGHPKV 9
LGHP+V
Sbjct: 311 LGHPEV 316


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LGHPKVY 10
GHP+VY
Sbjct: 236 FGHPEVY 242


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GGALGHP 7
GG +GHP
Sbjct: 373 GGVMGHP 379


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ALGHPKVY 10
A HPK+Y
Sbjct: 336 ARAHPKLY 343


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 GGALGHP 7
GG +GHP
Sbjct: 372 GGVMGHP 378


>sp|Y642_METJA|UNCHARACTERIZED protein MJ0642|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 HPKVY 10
HPK+Y
Sbjct: 315 HPKIY 319


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 6 HPKVY 10
HPKVY
Sbjct: 291 HPKVY 295


>sp|TFE_THEKO|TRANSCRIPTION factor E|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GALGHPKV 9
G GHPK+
Sbjct: 118 GTEGHPKL 125


>sp|TFE_PYRFU|TRANSCRIPTION factor E|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GALGHPKV 9
G GHPK+
Sbjct: 119 GTPGHPKL 126


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 3 ALGHPKVY 10
A HPK+Y
Sbjct: 332 ARSHPKLY 339


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 ALGHPKVY 10
A HPK+Y
Sbjct: 336 ARSHPKLY 343


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 ALGHPKVY 10
A HPK+Y
Sbjct: 332 ARSHPKLY 339


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 3 ALGHPKVY 10
A HPK+Y
Sbjct: 336 ARSHPKLY 343


>sp|Y2657_METHJ|UPF0210 protein Mhun_2657|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GGALGHPKV 9
GG LGH V
Sbjct: 419 GGLLGHAPV 427


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LGHPKVY 10
+GH KVY
Sbjct: 127 VGHAKVY 133


>sp|RS24_NATPD|SMALL ribosomal subunit protein eS24|Natronomonas pharaonis (strain

Query: 4 LGHPKVY 10
+GH KVY
Sbjct: 65 VGHAKVY 71


>sp|Y2269_METMJ|UPF0210 protein Memar_2269|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GGALGHPKV 9
GG LGH V
Sbjct: 419 GGLLGHAPV 427


>sp|RBL_METJA|RIBULOSE bisphosphate carboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GGALGHP 7
GG GHP
Sbjct: 378 GGVHGHP 384


>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 6 HPKVY 10
HPK+Y
Sbjct: 25 HPKIY 29




20|Sequence|96|105|HPKVYINLDK

>sp|AOX1_AERPE|HEME-COPPER oxidase subunit I+III|Aeropyrum pernix (strain ATCC 700893

Query: 1 HPKVYINL 8
HP+VYI L
Sbjct: 248 HPEVYILL 255


>sp|RS4_SULTO|SMALL ribosomal subunit protein uS4|Sulfurisphaera tokodaii (strain DSM

Query: 1 HPKVYINLDK 10
HP + INL+K
Sbjct: 16 HPWIRINLEK 25


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HPKVYI 6
HP+VYI
Sbjct: 238 HPEVYI 243


>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 PKVYINLDK 10
PKV+ N DK
Sbjct: 215 PKVHENFDK 223


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 PKVYINLDK 10
P++YI LDK
Sbjct: 908 PEIYIILDK 916


>sp|CARA_METKA|CARBAMOYL phosphate synthase small chain|Methanopyrus kandleri (strain AV19

Query: 1 HPKVYINLDK 10
HP+ I LD+
Sbjct: 89 HPRAEITLDE 98


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 HPKVYI 6
HP+VY+
Sbjct: 294 HPEVYV 299


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 4 VYINLD 9
VY+NLD
Sbjct: 617 VYVNLD 622


>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PKVYINLDK 10
PKV+I+++K
Sbjct: 193 PKVFIDIEK 201


Query: 2 PKVYINLDK 10
P ++NLDK
Sbjct: 337 PPAWVNLDK 345


>sp|TBP_AERPE|TATA-BOX-BINDING protein|Aeropyrum pernix (strain ATCC 700893

Query: 3 KVYINLDK 10
KVYI+L+K
Sbjct: 126 KVYIDLEK 133




21|Sequence|101|110|INLDKETKTG

>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INLDKETK 8
INLD ETK
Sbjct: 313 INLDVETK 320


>sp|PSB_HALVD|PROTEASOME subunit beta|Haloferax volcanii (strain ATCC 29605

Query: 4 DKETKTG 10
DKETKTG
Sbjct: 43 DKETKTG 49


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 1 INLDKETKT 9
IN +KETKT
Sbjct: 468 INENKETKT 476


>sp|G1PDH_METTP|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothrix thermoacetophila (strain DSM

Query: 1 INLDKETKT 9
+N+D ETK+
Sbjct: 138 LNMDGETKS 146


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 INLDKETK 8
+NLD ETK
Sbjct: 284 LNLDGETK 291


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DKETKTG 10
D+ETKTG
Sbjct: 239 DEETKTG 245


>sp|TFE_SACI7|TRANSCRIPTION factor E|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 LDKETKTG 10
+DKETK G
Sbjct: 166 IDKETKLG 173


>sp|TFE_SACI6|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.16.4 /

Query: 3 LDKETKTG 10
+DKETK G
Sbjct: 166 IDKETKLG 173


>sp|TFE_SACI4|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.14.25 /

Query: 3 LDKETKTG 10
+DKETK G
Sbjct: 166 IDKETKLG 173


>sp|TFE_SACI3|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 LDKETKTG 10
+DKETK G
Sbjct: 166 IDKETKLG 173


>sp|TFE_SACI2|TRANSCRIPTION factor E|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 LDKETKTG 10
+DKETK G
Sbjct: 166 IDKETKLG 173


>sp|AGOG_PYRAB|N-GLYCOSYLASE/DNA lyase|Pyrococcus abyssi (strain GE5 /

Query: 1 INLDKETKT 9
+ +DKE+KT
Sbjct: 135 LGVDKESKT 143


>sp|TFE_SACS2|TRANSCRIPTION factor E|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LDKETKTG 10
+DKETK G
Sbjct: 166 IDKETKLG 173


>sp|DHOM_METJA|HOMOSERINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INLDKETKTG 10
INL KET G
Sbjct: 157 INLAKETLAG 166




22|Sequence|106|115|ETKTGTCGYC

>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 TGTCGYC 10
TGTC YC
Sbjct: 138 TGTCPYC 144


>sp|COFH1_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina mazei (strain ATCC

Query: 4 TGTCGYC 10
TG+CG+C
Sbjct: 65 TGSCGFC 71


>sp|COFH_METBU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcoides burtonii (strain DSM

Query: 5 GTCGYC 10
GTCG+C
Sbjct: 63 GTCGFC 68


>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain

Query: 5 GTCGYC 10
GTCG+C
Sbjct: 66 GTCGFC 71


>sp|COFH1_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina acetivorans (strain

Query: 5 GTCGYC 10
GTCG+C
Sbjct: 66 GTCGFC 71


>sp|COFH_METM7|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C7

Query: 4 TGTCGYC 10
TGTCG+C
Sbjct: 60 TGTCGFC 66


>sp|COFH_METM6|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C6

Query: 4 TGTCGYC 10
+GTCG+C
Sbjct: 60 SGTCGFC 66


>sp|COFH_METTH|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanothermobacter

Query: 4 TGTCGYC 10
+G CG+C
Sbjct: 69 SGQCGFC 75


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 5 GTCGYC 10
GTC YC
Sbjct: 146 GTCPYC 151


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 5 GTCGYC 10
GTC YC
Sbjct: 141 GTCPYC 146


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 GTCGYC 10
GTC YC
Sbjct: 141 GTCPYC 146


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 GTCGYC 10
GTC YC
Sbjct: 143 GTCPYC 148


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 GTCGYC 10
GTC YC
Sbjct: 141 GTCPYC 146


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 GTCGYC 10
GTC YC
Sbjct: 141 GTCPYC 146


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 GTCGYC 10
GTC YC
Sbjct: 141 GTCPYC 146


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GTCGYC 10
GTC YC
Sbjct: 141 GTCPYC 146


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 5 GTCGYC 10
GTC YC
Sbjct: 141 GTCPYC 146


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 5 GTCGYC 10
GTC YC
Sbjct: 142 GTCPYC 147


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 GTCGYC 10
GTC YC
Sbjct: 147 GTCPYC 152


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 GTCGYC 10
GTC YC
Sbjct: 141 GTCPYC 146


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 GTCGYC 10
GTC YC
Sbjct: 141 GTCPYC 146


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 5 GTCGYC 10
GTC YC
Sbjct: 141 GTCPYC 146


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 GTCGYC 10
GTC YC
Sbjct: 141 GTCPYC 146


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 5 GTCGYC 10
GTC YC
Sbjct: 141 GTCPYC 146


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 GTCGYC 10
GTC YC
Sbjct: 165 GTCPYC 170


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 5 GTCGYC 10
GTC YC
Sbjct: 148 GTCPYC 153


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 GTCGYC 10
GTC YC
Sbjct: 148 GTCPYC 153


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 GTCGYC 10
GTC YC
Sbjct: 154 GTCPYC 159


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 5 GTCGYC 10
GTC YC
Sbjct: 141 GTCPYC 146


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KTGTCGYC 10
K+ TC YC
Sbjct: 668 KSNTCPYC 675


>sp|SUDHB_PYRFU|SULFIDE dehydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 4 TGTCGYC 10
TG CG C
Sbjct: 219 TGMCGAC 225


>sp|COFH2_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina acetivorans (strain

Query: 4 TGTCGYC 10
GTCG+C
Sbjct: 68 VGTCGFC 74


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KTGTCGYC 10
K TC YC
Sbjct: 667 KVSTCPYC 674


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 ETKTGTCGYC 10
E G+C YC
Sbjct: 148 EGCNGSCSYC 157


>sp|LEUC_SULTO|3-ISOPROPYLMALATE dehydratase large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 GTCGYC 10
GTCG C
Sbjct: 353 GTCGPC 358


>sp|LEUC_SULAC|3-ISOPROPYLMALATE dehydratase large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 5 GTCGYC 10
GTCG C
Sbjct: 353 GTCGPC 358


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 5 GTCGYC 10
GTCG C
Sbjct: 355 GTCGPC 360


>sp|LEUC_PYRNV|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 GTCGYC 10
GTCG C
Sbjct: 351 GTCGPC 356


>sp|LEUC_PYRIL|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 5 GTCGYC 10
GTCG C
Sbjct: 351 GTCGPC 356


>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 5 GTCGYC 10
GTCG C
Sbjct: 351 GTCGPC 356


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 GTCGYC 10
GTCG C
Sbjct: 351 GTCGPC 356


>sp|LEUC_PYRAE|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 GTCGYC 10
GTCG C
Sbjct: 351 GTCGPC 356


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 5 GTCGYC 10
GTCG C
Sbjct: 353 GTCGPC 358


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 5 GTCGYC 10
GTCG C
Sbjct: 353 GTCGPC 358


>sp|ACAR_METS5|ACRYLOYL-COENZYME A reductase|Metallosphaera sedula (strain ATCC 51363

Query: 5 GTCGYC 10
GTC YC
Sbjct: 91 GTCHYC 96


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 ETKTGTCGY 9
E TGT GY
Sbjct: 171 EVPTGTLGY 179


>sp|PSB_HALWD|PROTEASOME subunit beta|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ETKTGT 6
ETKTGT
Sbjct: 45 ETKTGT 50


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GTCGYC 10
G CG+C
Sbjct: 256 GKCGHC 261


>sp|PSB_HALVD|PROTEASOME subunit beta|Haloferax volcanii (strain ATCC 29605

Query: 1 ETKTGT 6
ETKTGT
Sbjct: 45 ETKTGT 50


>sp|HIS6_METM7|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 ETKTGTCGY 9
ETK G+C +
Sbjct: 151 ETKLGSCWF 159


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 TGTCGYC 10
TG C +C
Sbjct: 222 TGGCSFC 228


>sp|QUEC_METPE|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 ETKTGTCGYC 10
E G CG C
Sbjct: 192 EKACGVCGSC 201


>sp|HIS6_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 ETKTGTCGY 9
ETK G+C +
Sbjct: 151 ETKLGSCWF 159


>sp|HIS6_METM6|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 ETKTGTCGY 9
ETK G+C +
Sbjct: 151 ETKHGSCWF 159


>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 GTCGYC 10
G+C YC
Sbjct: 97 GSCHYC 102


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 GTCGYC 10
GTC YC
Sbjct: 142 GTCPYC 147


>sp|HYD2G_PYRFU|SULFHYDROGENASE 2 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GTCGYC 10
G CG+C
Sbjct: 253 GKCGHC 258


>sp|COFH2_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina barkeri (strain

Query: 4 TGTCGYC 10
G CG+C
Sbjct: 68 VGNCGFC 74




23|Sequence|111|124|TCGYCGLQFRQHHH

>sp|ARLY_METPE|ARGININOSUCCINATE lyase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 CGLQFRQHHH 14
CGL FR HH
Sbjct: 380 CGLPFRTAHH 389


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 CGYCGLQFRQHH 13
C CG++FR H
Sbjct: 91 CKKCGMRFRADH 102


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TCGYCGLQFR 10
TC YCG Q R
Sbjct: 149 TCPYCGEQAR 158


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CGYCGLQ 8
CGYCG +
Sbjct: 19 CGYCGFR 25


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 CGYCGLQ 8
CGYCG +
Sbjct: 19 CGYCGFR 25


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CGYCGLQ 8
CGYCG +
Sbjct: 13 CGYCGFR 19


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 CGYCGLQFRQHH 13
C CG +FR H
Sbjct: 91 CKKCGARFRADH 102


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CGYCGLQFRQHH 13
C CG +FR H
Sbjct: 89 CKKCGARFRADH 100


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 CGYCGLQFRQHH 13
C CG +FR H
Sbjct: 91 CKKCGARFRADH 102


>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GYCGLQFRQ 11
GY G++FRQ
Sbjct: 433 GYLGIKFRQ 441


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 1 TCGYCGLQFR 10
TC CGL R
Sbjct: 9 TCAVCGLSLR 18


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 CGYCGLQFRQHH 13
C CG +FR H
Sbjct: 91 CRKCGARFRADH 102


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 CGYCGLQFRQHH 13
C CG +FR H
Sbjct: 91 CKKCGSRFRADH 102


>sp|TF2B4_HALSA|TRANSCRIPTION initiation factor IIB 4|Halobacterium salinarum (strain ATCC

Query: 1 TCGYCGL 7
TCG CGL
Sbjct: 49 TCGECGL 55


>sp|RL40_METST|LARGE ribosomal subunit protein eL40|Methanosphaera stadtmanae (strain

Query: 2 CGYCGLQFR 10
CGY GL+F+
Sbjct: 34 CGYTGLRFK 42


>sp|TFE_IGNH4|TRANSCRIPTION factor E|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 CGYCGLQF 9
C CGLQF
Sbjct: 117 CPACGLQF 124


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TCGYCGLQ 8
TC YCG +
Sbjct: 142 TCPYCGFE 149


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TCGYCGLQ 8
TC YCG +
Sbjct: 142 TCPYCGFE 149


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TCGYCGLQ 8
TC YCG +
Sbjct: 142 TCPYCGFE 149


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 TCGYCGLQ 8
TC YCG +
Sbjct: 142 TCPYCGFE 149


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 TCGYCGLQ 8
TC YCG +
Sbjct: 142 TCPYCGFE 149


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TCGYCGLQFR 10
TC YCG R
Sbjct: 166 TCPYCGAHAR 175


>sp|TRUD2_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii

Query: 3 GYCGLQFRQ 11
GYCGL+ R
Sbjct: 83 GYCGLKDRH 91


>sp|TRUD1_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain

Query: 3 GYCGLQFRQ 11
GYCGL+ R
Sbjct: 57 GYCGLKDRH 65


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 TCGYCGLQFRQH 12
TC YCG + R H
Sbjct: 140 TCPYCGYE-RAH 150


>sp|RL40_METS3|LARGE ribosomal subunit protein eL40|Methanobrevibacter smithii (strain

Query: 2 CGYCGLQFR 10
CGY GL+F+
Sbjct: 34 CGYTGLRFK 42


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 3 GYCGLQFRQHHH 14
G+CG+ + HH
Sbjct: 165 GFCGVSQSKGHH 176


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 TCGYCGLQFR 10
TC YCG + R
Sbjct: 148 TCPYCGEKAR 157


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CGYCGLQFRQHH 13
C YCG + R H
Sbjct: 142 CPYCGGEARGDH 153


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 CGYCGLQ 8
C YCG Q
Sbjct: 208 CSYCGYQ 214


>sp|TTUA_PYRHO|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 CGYCGLQFR 10
C YCGL R
Sbjct: 128 CSYCGLTKR 136


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TCGYCGLQF 9
TC YCG F
Sbjct: 671 TCPYCGSVF 679


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TCGYCGLQFR 10
TC YCG R
Sbjct: 143 TCPYCGKHAR 152


>sp|Y664_METJA|UNCHARACTERIZED protein MJ0664|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TCGYCGLQFR 10
TC +CG + R
Sbjct: 265 TCPWCGAKLR 274


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TCGYCGLQFR 10
TC YCG R
Sbjct: 149 TCPYCGEHAR 158


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 CGYCGLQFR 10
C YCG Q R
Sbjct: 144 CPYCGKQAR 152


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TCGYCGLQ 8
TC YCG +
Sbjct: 142 TCPYCGYE 149


>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 1 TCGYCGLQFR 10
TC YC FR
Sbjct: 114 TCDYCRKPFR 123


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 TCGYCGLQF 9
TC YCG +
Sbjct: 155 TCPYCGYPY 163


>sp|PYRI_NATPD|ASPARTATE carbamoyltransferase regulatory chain|Natronomonas pharaonis

Query: 2 CGYCGLQFRQ 11
C YCG R+
Sbjct: 135 CSYCGTIIRE 144


>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1

Query: 1 TCGYCG 6
+CG+CG
Sbjct: 73 SCGFCG 78


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 TCGYCGLQ 8
TC YCG +
Sbjct: 142 TCPYCGAE 149


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TCGYCGLQ 8
TC YCG +
Sbjct: 142 TCPYCGAE 149


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TCGYCGLQ 8
TC YCG +
Sbjct: 142 TCPYCGAE 149


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 TCGYCGLQ 8
TC YCG +
Sbjct: 142 TCPYCGAE 149


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 TCGYCGL 7
TC YCG
Sbjct: 143 TCPYCGF 149


>sp|COFH_METM6|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C6

Query: 1 TCGYCGLQ 8
TCG+C +
Sbjct: 62 TCGFCAFK 69


>sp|COFH_METBU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcoides burtonii (strain DSM

Query: 1 TCGYCGLQ 8
TCG+C +
Sbjct: 64 TCGFCAFK 71


>sp|MOBB_METJA|PUTATIVE molybdopterin-guanine dinucleotide biosynthesis

Query: 2 CGYCGLQFR 10
CG+CG R
Sbjct: 155 CGHCGYNCR 163


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 TCGYCGLQFRQHHH 14
TC YCG + + H
Sbjct: 142 TCPYCGSEGARGDH 155


>sp|ARLY_METMP|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain DSM 14266

Query: 5 CGLQFRQHH 13
CG+ FR H
Sbjct: 378 CGIAFRMAH 386


>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 5 CGLQFRQHH 13
CG+ FR H
Sbjct: 378 CGIAFRMAH 386


>sp|ARLY_METM6|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C6 /

Query: 5 CGLQFRQHH 13
CG+ FR H
Sbjct: 378 CGIAFRMAH 386


>sp|ARLY_METM5|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C5 /

Query: 5 CGLQFRQHH 13
CG+ FR H
Sbjct: 378 CGIAFRMAH 386


>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain

Query: 1 TCGYCGLQ 8
TCG+C +
Sbjct: 67 TCGFCAFR 74


>sp|COFH1_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina acetivorans (strain

Query: 1 TCGYCGLQ 8
TCG+C +
Sbjct: 67 TCGFCAFR 74


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 TCGYCG 6
TC YCG
Sbjct: 147 TCPYCG 152


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 TCGYCG 6
TC YCG
Sbjct: 142 TCPYCG 147


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TCGYCG 6
TC YCG
Sbjct: 670 TCPYCG 675


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 1 TCGYCGLQFRQHH 13
TC CG + + H
Sbjct: 436 TCPVCGRELDEEH 448


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 TCGYCG 6
TCG CG
Sbjct: 464 TCGVCG 469


>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain

Query: 2 CGYCGL 7
CG+CG
Sbjct: 74 CGFCGF 79


>sp|FDHD_SULTO|SULFUR carrier protein FdhD|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TCGYCGLQF 9
+CG CG F
Sbjct: 102 SCGVCGRAF 110


>sp|FDHD_SACS2|SULFUR carrier protein FdhD|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TCGYCGLQF 9
+CG CG F
Sbjct: 104 SCGVCGRAF 112


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CGYCGLQFRQHHH 14
CGYC FR+ ++
Sbjct: 58 CGYC--TFRRENY 68


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 1 TCGYCGLQF 9
TC +CG Q
Sbjct: 445 TCPHCGTQL 453


>sp|PYRI_KORCO|ASPARTATE carbamoyltransferase regulatory chain|Korarchaeum cryptofilum

Query: 2 CGYCGLQFRQ 11
C YCG R+
Sbjct: 138 CEYCGEYLRE 147


>sp|RL24E_THEGJ|LARGE ribosomal subunit protein eL24|Thermococcus gammatolerans (strain

Query: 2 CGYCGLQF 9
C YCG +F
Sbjct: 7 CSYCGREF 14


>sp|VAPC1_THEAC|RIBONUCLEASE VapC1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 CGYCGLQFRQHH 13
C CG + ++H+
Sbjct: 173 CDICGHEVKRHY 184


>sp|RNP4_SULTO|RIBONUCLEASE P protein component 4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TCGYCGLQFR 10
TC YCG R
Sbjct: 85 TCLYCGWTRR 94


>sp|COFH_METM7|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C7

Query: 1 TCGYCGLQ 8
TCG+C +
Sbjct: 62 TCGFCAYK 69


>sp|Y416_METJA|DOUBLE zinc ribbon protein MJ0416|Methanocaldococcus jannaschii (strain

Query: 2 CGYCGLQFRQ 11
C YCG + ++
Sbjct: 179 CPYCGYRLKR 188


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 CGYCGLQ 8
CGYC +
Sbjct: 31 CGYCNFK 37


>sp|COFH_METPE|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanosphaerula palustris (strain

Query: 2 CGYCGL 7
CG+CG
Sbjct: 74 CGFCGF 79


>sp|FDHD_SULAC|SULFUR carrier protein FdhD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TCGYCGLQF 9
+CG CG F
Sbjct: 99 SCGICGRGF 107


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 CGYCG 6
CG+CG
Sbjct: 431 CGWCG 435


>sp|COFH2_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina acetivorans (strain

Query: 1 TCGYCG 6
TCG+C
Sbjct: 70 TCGFCA 75


>sp|COFG_METTP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 CGYCGLQ 8
CGYC +
Sbjct: 35 CGYCSFR 41


>sp|TF2B_METST|TRANSCRIPTION initiation factor IIB|Methanosphaera stadtmanae (strain ATCC

Query: 2 CGYCGL 7
CG CGL
Sbjct: 34 CGACGL 39


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 2 CGYCGLQ 8
CGYC +
Sbjct: 24 CGYCSFR 30


>sp|TF2B_METTH|TRANSCRIPTION initiation factor IIB|Methanothermobacter thermautotrophicus

Query: 2 CGYCGL 7
CG CGL
Sbjct: 33 CGKCGL 38


>sp|ARSM_METAC|ARSENITE methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GYCGLQFRQ 11
GY ++FRQ
Sbjct: 122 GYSNVEFRQ 130


>sp|RL24E_THEON|LARGE ribosomal subunit protein eL24|Thermococcus onnurineus (strain

Query: 2 CGYCGLQF 9
C YCG +F
Sbjct: 7 CSYCGREF 14


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 1 TCGYCGLQFR 10
TC +CG R
Sbjct: 255 TCPFCGKPLR 264


>sp|RS27A_NITMS|SMALL ribosomal subunit protein eS31|Nitrosopumilus maritimus (strain

Query: 1 TCGYCGL-QFRQ 11
TCG CGL +F+Q
Sbjct: 46 TCGKCGLTEFKQ 57


>sp|RL24E_THEKO|LARGE ribosomal subunit protein eL24|Thermococcus kodakarensis (strain

Query: 2 CGYCGLQF 9
C YCG +F
Sbjct: 7 CSYCGREF 14


>sp|COFC_METLZ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 YCGLQFRQH 12
Y G FR+H
Sbjct: 136 YYGFSFRRH 144


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 CGYCGLQFR 10
C YCG+ R
Sbjct: 146 CPYCGVPAR 154


>sp|RL24E_THESM|LARGE ribosomal subunit protein eL24|Thermococcus sibiricus (strain DSM

Query: 2 CGYCGLQF 9
C YCG +F
Sbjct: 7 CSYCGKEF 14


>sp|RL2_KORCO|LARGE ribosomal subunit protein uL2|Korarchaeum cryptofilum (strain

Query: 3 GYCGLQFRQHHH 14
G G+QFR H
Sbjct: 11 GRGGIQFRSKDH 22


>sp|NK_METTH|NUCLEOSIDE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 GYCGLQFRQHH 13
G C + F HH
Sbjct: 181 GVCDILFGNHH 191


>sp|TFE_NATPD|TRANSCRIPTION factor E|Natronomonas pharaonis (strain ATCC 35678

Query: 2 CGYCGLQF 9
CG C L+F
Sbjct: 119 CGECQLRF 126


>sp|PYRI_PYRIL|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum islandicum

Query: 2 CGYCG 6
C YCG
Sbjct: 138 CAYCG 142


>sp|PYRI_PYRCJ|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum calidifontis

Query: 2 CGYCG 6
C YCG
Sbjct: 138 CAYCG 142


>sp|PYRI_PYRAR|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum arsenaticum

Query: 2 CGYCG 6
C YCG
Sbjct: 138 CAYCG 142


>sp|PYRI_PYRAE|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum aerophilum

Query: 2 CGYCG 6
C YCG
Sbjct: 138 CAYCG 142


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 CGYCGLQ 8
C YCG +
Sbjct: 143 CPYCGFE 149


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 CGYCGLQFRQHH 13
CGYC + H
Sbjct: 23 CGYCTFRRDAGH 34


>sp|COFG_ARCFU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CGYCGLQ 8
C YCG +
Sbjct: 22 CDYCGFR 28


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 CGYC 5
CGYC
Sbjct: 391 CGYC 394


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 2 CGYC 5
CGYC
Sbjct: 139 CGYC 142


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 2 CGYC 5
CGYC
Sbjct: 647 CGYC 650


>sp|COFG_METVS|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 CGYC 5
CGYC
Sbjct: 53 CGYC 56


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 CGYC 5
CGYC
Sbjct: 19 CGYC 22


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CGYC 5
CGYC
Sbjct: 31 CGYC 34


>sp|COFG_METMJ|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 CGYC 5
CGYC
Sbjct: 24 CGYC 27


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 2 CGYC 5
CGYC
Sbjct: 53 CGYC 56


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 2 CGYC 5
CGYC
Sbjct: 53 CGYC 56


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 2 CGYC 5
CGYC
Sbjct: 53 CGYC 56


>sp|COFG_METJA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CGYC 5
CGYC
Sbjct: 53 CGYC 56


>sp|PYRI_HALWD|ASPARTATE carbamoyltransferase regulatory chain|Haloquadratum walsbyi (strain

Query: 2 CGYCGLQFRQ 11
C YCG R+
Sbjct: 159 CDYCGSIVRE 168


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TCGYCG 6
TC +CG
Sbjct: 418 TCSWCG 423


>sp|TF2B_METMZ|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (Methanosarcina

Query: 2 CGYCGL 7
CG CGL
Sbjct: 60 CGDCGL 65


>sp|TF2B_METMA|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CGYCGL 7
CG CGL
Sbjct: 60 CGDCGL 65


>sp|TF2B_METAC|TRANSCRIPTION initiation factor IIB|Methanosarcina acetivorans (strain ATCC

Query: 2 CGYCGL 7
CG CGL
Sbjct: 60 CGDCGL 65


>sp|RL40_METTH|LARGE ribosomal subunit protein eL40|Methanothermobacter

Query: 2 CGYCGLQFR 10
CGY GL+++
Sbjct: 34 CGYKGLRYK 42


>sp|COFG_METPE|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 CGYCGL 7
CGYC
Sbjct: 24 CGYCSF 29


>sp|TRPA_METKA|TRYPTOPHAN synthase alpha chain|Methanopyrus kandleri (strain AV19 /

Query: 1 TCGYCGLQ 8
TCG+ GL+
Sbjct: 26 TCGHPGLE 33


>sp|RNP4_METMA|RIBONUCLEASE P protein component 4|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TCGYCGLQFR 10
TC +CG + R
Sbjct: 91 TCEHCGKEMR 100


>sp|HIS8_NATPD|HISTIDINOL-PHOSPHATE aminotransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GYCGLQFRQHH 13
Y G+ R HH
Sbjct: 117 AYYGMSARYHH 127


>sp|RL24E_METJA|LARGE ribosomal subunit protein eL24|Methanocaldococcus jannaschii

Query: 1 TCGYCGLQ 8
TC +CG +
Sbjct: 6 TCSFCGYE 13


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 1 TCGYCGLQFRQH 12
TC CG + +H
Sbjct: 92 TCPNCGEKTEEH 103


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 TCGYCGLQFRQH 12
TC CG + +H
Sbjct: 104 TCPNCGEKTEEH 115


>sp|FER_METAC|FERREDOXIN acetivorans (strain ATCC 35395

Query: 2 CGYCG 6
CGYCG
Sbjct: 54 CGYCG 58


>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus (strain

Query: 1 TCGYCGLQFRQHH 13
TC CG + H
Sbjct: 425 TCPVCGRPLDEEH 437


>sp|NCSA_HALVD|TRNA 2-thiolation protein NcsA|Haloferax volcanii (strain ATCC 29605

Query: 2 CGYCGLQFRQ 11
C YCG+ FR+
Sbjct: 143 CAYCGV-FRR 151


>sp|RL24E_AERPE|LARGE ribosomal subunit protein eL24|Aeropyrum pernix (strain ATCC

Query: 1 TCGYCG 6
TC +CG
Sbjct: 6 TCSFCG 11


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TCGYCGLQ 8
TC +CG +
Sbjct: 142 TCPFCGAE 149


>sp|END4_CENSY|PROBABLE endonuclease 4|Cenarchaeum symbiosum (strain A)

Query: 5 CGLQFRQHHH 14
CG + +H+H
Sbjct: 222 CGSKLDRHYH 231


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 CGYCGLQFRQHHH 14
C YCG + + H
Sbjct: 146 CPYCGAEGARGDH 158


>sp|RNP4_METLZ|RIBONUCLEASE P protein component 4|Methanocorpusculum labreanum (strain ATCC

Query: 1 TCGYCG 6
TCG CG
Sbjct: 87 TCGICG 92


>sp|FWDF_METJA|POLYFERREDOXIN protein FwdF|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TCGYCGL 7
TCG+C
Sbjct: 246 TCGWCAF 252


>sp|FERA_METJA|UNCHARACTERIZED ferredoxin MJ0533|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CGYCG 6
CGYCG
Sbjct: 9 CGYCG 13






THE END