NDUS4_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|LVVSMSVAAM

***** No hits found ******


2|SequenceR|15|6|WLTQRLVVSM

>sp|Y516_METST|UPF0173 metal-dependent hydrolase Msp_0516|Methanosphaera stadtmanae

Query: 1 WLTQRLVVSM 10
WL R+V+ M
Sbjct: 185 WLQSRIVIPM 194


>sp|PGP_PYRNV|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 WLTQRLVVS 9
WL +RL VS
Sbjct: 157 WLCERLGVS 165




3|SequenceR|20|11|VARRRWLTQR

>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 2 ARRRWLTQR 10
A+R WL QR
Sbjct: 113 AKRPWLLQR 121


>sp|ASD_METJA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanocaldococcus

Query: 1 VARRRWLT 8
VARR WL+
Sbjct: 145 VARRCWLS 152


>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VARRRWLTQR 10
+A+RRW+ +R
Sbjct: 18 MAKRRWVFER 27


>sp|RS25_AERPE|SMALL ribosomal subunit protein eS25|Aeropyrum pernix (strain ATCC

Query: 1 VARRRWLT 8
VAR RW+T
Sbjct: 42 VARERWVT 49


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 2 ARRRWLT 8
AR+RW+T
Sbjct: 11 ARKRWIT 17


>sp|RNH2_METMP|RIBONUCLEASE HII|Methanococcus maripaludis (strain DSM 14266

Query: 1 VARRRWLTQR 10
+AR+ W T +
Sbjct: 217 IARKSWATSK 226


>sp|RNH2_METM7|RIBONUCLEASE HII|Methanococcus maripaludis (strain C7 /

Query: 1 VARRRWLTQR 10
+AR+ W T +
Sbjct: 214 IARKSWATSK 223


>sp|RNH2_METM6|RIBONUCLEASE HII|Methanococcus maripaludis (strain C6 /

Query: 1 VARRRWLTQR 10
+AR+ W T +
Sbjct: 214 IARKSWATSK 223


>sp|RNH2_METM5|RIBONUCLEASE HII|Methanococcus maripaludis (strain C5 /

Query: 1 VARRRWLTQR 10
+AR+ W T +
Sbjct: 214 IARKSWATSK 223


>sp|LEU1_PYRAB|2-ISOPROPYLMALATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 RRRWLT 8
R+RW+T
Sbjct: 365 RKRWIT 370


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 2 ARRRWLTQR 10
AR WLT+R
Sbjct: 117 ARGVWLTER 125


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VARRRW 6
++RRRW
Sbjct: 386 ISRRRW 391


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 2 ARRRWLTQR 10
AR WLT+R
Sbjct: 116 ARGLWLTER 124


>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VARRRWLTQR 10
+A+RRW+ ++
Sbjct: 16 MAKRRWVFEK 25


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 ARRRWL 7
ARR+WL
Sbjct: 5 ARRKWL 10


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 RRRWL 7
RRRWL
Sbjct: 550 RRRWL 554


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 2 ARRRWLTQR 10
AR WLT+R
Sbjct: 116 ARGVWLTER 124


>sp|RAD50_PYRHO|DNA double-strand break repair Rad50|Pyrococcus horikoshii (strain ATCC

Query: 1 VARRRWLTQR 10
VAR RW+ +R
Sbjct: 340 VARIRWIEER 349




4|SequenceR|25|16|LAAVAVARRR

***** No hits found ******


5|SequenceR|30|21|VRSVSLAAVA

***** No hits found ******


6|SequenceR|35|26|LSRTPVRSVS

>sp|AROB_AERPE|3-DEHYDROQUINATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSRTPVRSVS 10
LSR PV +VS
Sbjct: 339 LSRVPVETVS 348


>sp|RL5_METB6|LARGE ribosomal subunit protein uL5|Methanoregula boonei (strain DSM

Query: 3 RTPVRSVS 10
+TP+RSV+
Sbjct: 35 QTPIRSVA 42




7|SequenceR|40|31|WTSTRLSRTP

>sp|Y3024_HALLT|UNCHARACTERIZED protein Hlac_3024|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 STRLSRTP 10
S R+SRTP
Sbjct: 234 SARISRTP 241


>sp|GPMI_HALWD|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 WTSTRLS 7
WT TR+S
Sbjct: 191 WTRTRMS 197


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WTSTRLSRTP 10
W +T L R P
Sbjct: 469 WPATALDRVP 478


>sp|GFCR_ARCFU|TRANSCRIPTIONAL regulator GfcR|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WTSTRLSRTP 10
W TR+ TP
Sbjct: 37 WLITRVGETP 46




8|SequenceR|45|36|DQALRWTSTR

>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 2 QALRWTSTR 10
+ +RWT+TR
Sbjct: 269 RPVRWTATR 277


>sp|UPPS_AERPE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Aeropyrum pernix

Query: 1 DQALRWTSTR 10
D+A++W STR
Sbjct: 204 DRAVQWFSTR 213


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DQALRWTS 8
D+A+RW S
Sbjct: 467 DRAIRWLS 474


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 DQALRWTS 8
D+A+RW S
Sbjct: 474 DRAIRWLS 481


>sp|METXA_METRM|HOMOSERINE O-acetyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 2 QALRWT 7
QAL+WT
Sbjct: 157 QALQWT 162


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 4 LRWTSTR 10
LRW +TR
Sbjct: 673 LRWRATR 679




9|SequenceR|50|41|TDQTQDQALR

>sp|MFNB_METBF|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 QTQDQAL 9
QT+DQAL
Sbjct: 92 QTEDQAL 98


>sp|AROK_THEGJ|SHIKIMATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 TDQTQDQALR 10
TD T+D+ L+
Sbjct: 150 TDNTRDELLK 159


>sp|GATC_METTP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Methanothrix thermoacetophila (strain

Query: 4 TQDQALR 10
TQD+ALR
Sbjct: 71 TQDEALR 77


>sp|RS3A_HALWD|SMALL ribosomal subunit protein eS1|Haloquadratum walsbyi (strain DSM

Query: 2 DQTQDQALR 10
D++Q+QA+R
Sbjct: 127 DRSQEQAIR 135




10|SequenceR|55|46|VTILQTDQTQ

***** No hits found ******


11|SequenceR|60|51|DLKEDVTILQ

>sp|FLAA_METVO|FLAGELLIN A|Methanococcus voltae

Query: 1 DLKEDVTILQ 10
D EDV ILQ
Sbjct: 210 DKTEDVVILQ 219


>sp|VORB_PYRAB|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus abyssi (strain GE5 /

Query: 3 KEDVTILQ 10
KED+ +LQ
Sbjct: 286 KEDIEVLQ 293


>sp|RRP41_THEON|EXOSOME complex component Rrp41|Thermococcus onnurineus (strain NA1)

Query: 2 LKEDVTILQ 10
LK D+T+LQ
Sbjct: 194 LKNDITLLQ 202


>sp|RRP41_THEKO|EXOSOME complex component Rrp41|Thermococcus kodakarensis (strain ATCC

Query: 2 LKEDVTILQ 10
LK D+T+LQ
Sbjct: 194 LKNDITLLQ 202


>sp|RRP41_PYRHO|EXOSOME complex component Rrp41|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LKEDVTILQ 10
LK D+T+LQ
Sbjct: 194 LKNDITLLQ 202


>sp|RRP41_PYRAB|EXOSOME complex component Rrp41|Pyrococcus abyssi (strain GE5 /

Query: 2 LKEDVTILQ 10
LK D+T+LQ
Sbjct: 194 LKNDITLLQ 202


>sp|RF1_HALSA|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 1 DLKEDVTILQ 10
DL+EDV I +
Sbjct: 325 DLREDVVIYE 334


>sp|RF1_HALS3|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 1 DLKEDVTILQ 10
DL+EDV I +
Sbjct: 325 DLREDVVIYE 334


>sp|DUT_METBU|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanococcoides

Query: 1 DLKEDVTILQ 10
DLK+D I+Q
Sbjct: 138 DLKKDARIMQ 147


>sp|RRP41_THEGJ|EXOSOME complex component Rrp41|Thermococcus gammatolerans (strain DSM

Query: 2 LKEDVTILQ 10
LK D+T+LQ
Sbjct: 194 LKNDITLLQ 202


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 DLKEDVTIL 9
+LKE+V+IL
Sbjct: 200 ELKEEVSIL 208


>sp|ACDG2_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 DLKEDVT 7
DLK+DVT
Sbjct: 416 DLKKDVT 422


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 DLKEDVT 7
D+KEDVT
Sbjct: 391 DVKEDVT 397


>sp|ACDG2_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 1 DLKEDVT 7
DLK DVT
Sbjct: 417 DLKSDVT 423


>sp|ACDG1_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 1 DLKEDVT 7
DLK DVT
Sbjct: 417 DLKSDVT 423


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DLKEDVTILQ 10
DLKED+ +Q
Sbjct: 249 DLKEDIGTVQ 258


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 2 LKEDVTILQ 10
L EDVT+L+
Sbjct: 600 LPEDVTLLE 608




12|SequenceR|65|56|TLTTIDLKED

>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 1 TLTTIDLKED 10
++TT+D+++D
Sbjct: 147 SITTVDMRDD 156


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 TLTTIDLKED 10
TL +DLKED
Sbjct: 210 TLVFMDLKED 219




13|SequenceR|70|61|EEPVGTLTTI

>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 1 EEPVGTLTTI 10
EEPVG+L +
Sbjct: 191 EEPVGSLLRV 200


>sp|TRUA_PYRNV|TRNA pseudouridine synthase A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 EPVGTLTTI 10
EP T+TTI
Sbjct: 130 EPASTVTTI 138


>sp|FLUC3_METBF|FLUORIDE-SPECIFIC ion channel FluC 3|Methanosarcina barkeri (strain Fusaro /

Query: 3 PVGTLT 8
PVGTLT
Sbjct: 33 PVGTLT 38


>sp|DPCKG_METTP|GTP-DEPENDENT dephospho-CoA kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EEPVGTLT 8
E P GTLT
Sbjct: 94 ENPAGTLT 101




14|SequenceR|75|66|RTKIHEEPVG

>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 1 RTKIHEEPVG 10
R K H EPVG
Sbjct: 354 RRKTHGEPVG 363


>sp|HEM1_SACS2|GLUTAMYL-TRNA reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 IHEEPVG 10
IH EP+G
Sbjct: 80 IHNEPIG 86


>sp|HEM1_SACI7|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 IHEEPVG 10
+H EP+G
Sbjct: 80 VHNEPIG 86


>sp|HEM1_SACI6|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 IHEEPVG 10
+H EP+G
Sbjct: 80 VHNEPIG 86


>sp|HEM1_SACI4|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 IHEEPVG 10
+H EP+G
Sbjct: 80 VHNEPIG 86


>sp|HEM1_SACI3|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 IHEEPVG 10
+H EP+G
Sbjct: 80 VHNEPIG 86


>sp|HEM1_SACI2|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 IHEEPVG 10
+H EP+G
Sbjct: 80 VHNEPIG 86


>sp|HEM1_SACI1|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 IHEEPVG 10
+H EP+G
Sbjct: 80 VHNEPIG 86


>sp|TRPE_SACS2|ANTHRANILATE synthase component 1|Saccharolobus solfataricus (strain ATCC

Query: 3 KIHEEPV 9
KIH++PV
Sbjct: 53 KIHDDPV 59


>sp|CBPX2_SACS2|THERMOSTABLE carboxypeptidase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RTKIHEEP 8
R KIHE P
Sbjct: 22 RRKIHENP 29


>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 TKIHEEPVG 10
T IH PVG
Sbjct: 207 TGIHPSPVG 215


>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 4 IHEEPVG 10
+HE PVG
Sbjct: 211 VHESPVG 217


>sp|PPAC_METTP|MANGANESE-DEPENDENT inorganic pyrophosphatase|Methanothrix thermoacetophila (strain DSM

Query: 5 HEEPVG 10
H EPVG
Sbjct: 112 HNEPVG 117


>sp|PDAD_THEKO|PYRUVOYL-DEPENDENT arginine decarboxylase|Thermococcus kodakarensis (strain ATCC

Query: 3 KIHEEPVG 10
K+H+ P+G
Sbjct: 55 KVHDVPIG 62


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 TKIHEEPV 9
+IHE+PV
Sbjct: 1112 AEIHEDPV 1119




15|SequenceR|80|71|FIRVKRTKIH

>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FIRVKRTKIH 10
FIR+ R+ IH
Sbjct: 272 FIRIIRSNIH 281


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 FIRVKRTKIH 10
F+R KR KI+
Sbjct: 283 FVREKRPKIY 292


>sp|LYSY_SACS2|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FIRVKRTKIH 10
FIR+ R IH
Sbjct: 275 FIRIIRGNIH 284


>sp|FWDF_METJA|POLYFERREDOXIN protein FwdF|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IRVKRTKIH 10
I+VKRT+I+
Sbjct: 328 IKVKRTEIN 336


>sp|LYSY_SULAC|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FIRVKRTKIH 10
F+RV R IH
Sbjct: 273 FVRVIRGNIH 282




16|SequenceR|85|76|NRAPVFIRVK

>sp|DHYS_PICTO|PROBABLE deoxyhypusine synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 NRAPVFI 7
NR PVFI
Sbjct: 182 NRIPVFI 188


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RAPVFIRVK 10
R PVF+ VK
Sbjct: 527 RGPVFLNVK 535


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 NRAPVFIR 8
N+AP+F R
Sbjct: 214 NKAPIFAR 221


>sp|RL18E_AERPE|LARGE ribosomal subunit protein eL18|Aeropyrum pernix (strain ATCC

Query: 1 NRAPVFIRV 9
N APV++RV
Sbjct: 25 NSAPVWLRV 33


>sp|ARLMC_PYRFU|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus furiosus

Query: 1 NRAPVFIR 8
NR P++IR
Sbjct: 142 NRTPLYIR 149


>sp|KCY_AERPE|CYTIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RAPVFIRVK 10
+APV++RV+
Sbjct: 95 KAPVWVRVR 103


>sp|PDXT_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum aerophilum (strain

Query: 2 RAPVFIR 8
RAP F+R
Sbjct: 144 RAPAFVR 150




17|SequenceR|90|81|GSQMNNRAPV

>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 SQMNNRAP 9
S +NNRAP
Sbjct: 133 SHLNNRAP 140


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 MNNRAP 9
+NNRAP
Sbjct: 461 LNNRAP 466


>sp|HIS5_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 1 GSQMNNRAPV 10
GS M N AP+
Sbjct: 49 GSAMENLAPL 58




18|SequenceR|95|86|KTNNVGSQMN

>sp|RS8_METBU|SMALL ribosomal subunit protein uS8|Methanococcoides burtonii (strain DSM

Query: 1 KTNNVGSQM 9
+ NNVG Q+
Sbjct: 117 RENNVGGQL 125




19|SequenceR|100|91|EMKWKKTNNV

>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 MKWKKTN 8
MKWKK+N
Sbjct: 944 MKWKKSN 950


Query: 1 EMKWKKTNNV 10
E+KW+K N+
Sbjct: 144 EIKWEKAENL 153


>sp|GGR2_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EMKWKK 6
EM+W+K
Sbjct: 318 EMRWRK 323


>sp|Y771_ARCFU|UNCHARACTERIZED protein AF_0771|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KWKKTNNV 10
KWK T N+
Sbjct: 258 KWKITKNI 265


>sp|SURE_THEKO|5'-NUCLEOTIDASE SurE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EMKWKKT 7
E+ WKKT
Sbjct: 127 EVDWKKT 133


>sp|SURE_THEGJ|5'-NUCLEOTIDASE SurE|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EMKWKKT 7
E+ WKKT
Sbjct: 127 EVDWKKT 133


>sp|PIMT_METM6|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 MKWKKTN 8
M++KKTN
Sbjct: 184 MRYKKTN 190


>sp|SYDND_METJA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EMKWKKTN 8
+MKW++T+
Sbjct: 4 KMKWRRTH 11


>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 3 KWKKTNNV 10
KW K NN+
Sbjct: 235 KWLKENNI 242




20|SequenceR|105|96|ERTDFEMKWK

>sp|RS2_METS3|SMALL ribosomal subunit protein uS2|Methanobrevibacter smithii (strain

Query: 1 ERTDFEMKW 9
E TDFE+K+
Sbjct: 190 EATDFELKF 198


>sp|RS2_METST|SMALL ribosomal subunit protein uS2|Methanosphaera stadtmanae (strain

Query: 1 ERTDFEMK 8
E TDFE+K
Sbjct: 190 EPTDFELK 197


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 2 RTDFEMKWK 10
R D E KWK
Sbjct: 662 RADDEEKWK 670


>sp|Y1278_THEKO|DNA-BINDING protein TK1278|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RTDFEMKW 9
R DF++KW
Sbjct: 105 RRDFKIKW 112


>sp|FEN_THEON|FLAP endonuclease 1|Thermococcus onnurineus (strain NA1)

Query: 4 DFEMKWK 10
D+E+KW+
Sbjct: 287 DYELKWR 293


>sp|NEP1_PYRCJ|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum calidifontis

Query: 4 DFEMKW 9
DFE KW
Sbjct: 180 DFENKW 185


>sp|FEN_THEKO|FLAP endonuclease 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 DFEMKWK 10
D+E+KW+
Sbjct: 287 DYELKWR 293


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 4 DFEMKWK 10
D+E+KW+
Sbjct: 287 DYELKWR 293


>sp|Y1102_THEON|DNA-BINDING protein TON_1102|Thermococcus onnurineus (strain NA1)

Query: 2 RTDFEMKW 9
R DF +KW
Sbjct: 105 RRDFRIKW 112


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ERTDFE 6
ERTDFE
Sbjct: 529 ERTDFE 534


>sp|RS3_CENSY|SMALL ribosomal subunit protein uS3|Cenarchaeum symbiosum (strain A)

Query: 2 RTDFEMK 8
R DFEMK
Sbjct: 190 RKDFEMK 196


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 4 DFEMKW 9
D+E+KW
Sbjct: 288 DYELKW 293


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ERTDFEMKW 9
ERT+ EMK+
Sbjct: 674 ERTEAEMKY 682


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 DFEMKWK 10
DFE+K+K
Sbjct: 7 DFEIKYK 13


>sp|IF2A_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 4 DFEMKWK 10
DFEM W+
Sbjct: 117 DFEMAWQ 123




21|SequenceR|110|101|PNEWRERTDF

>sp|OGT_METMA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PNEWRERTDF 10
PN+W E DF
Sbjct: 37 PNDWVENKDF 46


>sp|HISX_NATPD|HISTIDINOL dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PNEWRERTD 9
P++WRE+ D
Sbjct: 98 PDDWREQFD 106


>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PNEWR 5
PNEWR
Sbjct: 196 PNEWR 200


>sp|Y822_METMA|UPF0235 protein MM_0822|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NEWRERTD 9
NEWR+R +
Sbjct: 37 NEWRKRIE 44


>sp|Y841_META3|UPF0235 protein Maeo_0841|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 NEWRER 7
NEWR+R
Sbjct: 34 NEWRKR 39


>sp|Y4097_METAC|UPF0235 protein MA_4097|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NEWRER 7
NEWR+R
Sbjct: 38 NEWRKR 43


>sp|RS5_SULTO|SMALL ribosomal subunit protein uS5|Sulfurisphaera tokodaii (strain DSM

Query: 1 PNEWRERT 8
P EW+ RT
Sbjct: 10 PEEWKPRT 17


>sp|Y538_METM5|UPF0235 protein MmarC5_0538|Methanococcus maripaludis (strain C5 /

Query: 2 NEWRERTD 9
NEWR+R +
Sbjct: 32 NEWRKRIE 39


>sp|Y1055_METMP|UPF0235 protein MMP1055|Methanococcus maripaludis (strain DSM 14266

Query: 2 NEWRERTD 9
NEWR+R +
Sbjct: 32 NEWRKRIE 39


>sp|Y1603_METM6|UPF0235 protein MmarC6_1603|Methanococcus maripaludis (strain C6 /

Query: 2 NEWRERTD 9
NEWR+R +
Sbjct: 32 NEWRKRIE 39


>sp|MOBA_THEGJ|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus gammatolerans

Query: 1 PNEWRE 6
P EWRE
Sbjct: 169 PEEWRE 174


>sp|THI4_HALVD|THIAMINE thiazole synthase|Haloferax volcanii (strain ATCC 29605

Query: 3 EWRERTD 9
E+RERTD
Sbjct: 25 EFRERTD 31


>sp|Y618_METJA|UPF0235 protein MJ0618|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NEWRER 7
NEWR+R
Sbjct: 32 NEWRKR 37


>sp|Y309_METM7|UPF0235 protein MmarC7_0309|Methanococcus maripaludis (strain C7 /

Query: 2 NEWRERTD 9
NEWR+R +
Sbjct: 32 NEWRKRIE 39


>sp|RNP4_METVS|RIBONUCLEASE P protein component 4|Methanococcus vannielii (strain ATCC 35089

Query: 1 PNEWRER 7
P EWR R
Sbjct: 57 PKEWRRR 63


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PNEWR 5
PNEWR
Sbjct: 837 PNEWR 841


>sp|Y637_METTH|UPF0235 protein MTH_637|Methanothermobacter thermautotrophicus (strain

Query: 2 NEWRERTD 9
NEWR+R +
Sbjct: 33 NEWRKRIE 40


>sp|HIS4_METVS|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii (strain

Query: 4 WRERTDF 10
W E+TD+
Sbjct: 141 WTEKTDY 147


>sp|HIS4_METVA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii

Query: 4 WRERTDF 10
W E+TD+
Sbjct: 141 WTEKTDY 147


>sp|COBQ_METJA|PROBABLE cobyric acid synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NEWRERTDF 10
NE+R+ DF
Sbjct: 102 NEYRKNKDF 110


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 2 NEWRERTDF 10
++W RTD+
Sbjct: 353 SKWEPRTDY 361


>sp|HIS4_METVO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus voltae

Query: 4 WRERTDF 10
W+E+T++
Sbjct: 141 WKEKTEY 147


>sp|RNP4_METM5|RIBONUCLEASE P protein component 4|Methanococcus maripaludis (strain C5 /

Query: 1 PNEWRER 7
P EW+ R
Sbjct: 57 PKEWKRR 63


>sp|RL11_HALMA|LARGE ribosomal subunit protein uL11|Haloarcula marismortui (strain ATCC

Query: 1 PNEWRERTD 9
P E++ER D
Sbjct: 140 PREFKERID 148


>sp|LEUC_HALMA|3-ISOPROPYLMALATE dehydratase large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 EWRERTDF 10
EW E TD+
Sbjct: 242 EWLEETDY 249


>sp|RNP4_METMP|RIBONUCLEASE P protein component 4|Methanococcus maripaludis (strain DSM 14266

Query: 1 PNEWRER 7
P EW+ R
Sbjct: 57 PKEWKRR 63


>sp|RNP4_METM6|RIBONUCLEASE P protein component 4|Methanococcus maripaludis (strain C6 /

Query: 1 PNEWRER 7
P EW+ R
Sbjct: 57 PKEWKRR 63


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 NEWRERTD 9
++WRER +
Sbjct: 397 DDWRERME 404


>sp|SYR_METHJ|ARGININE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 EWRERTDF 10
+W+E DF
Sbjct: 429 DWKEALDF 436


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 EWRERTDF 10
+W+E DF
Sbjct: 429 DWKEALDF 436


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EWRERTDF 10
EW E DF
Sbjct: 315 EWAESLDF 322


>sp|RNP4_METM7|RIBONUCLEASE P protein component 4|Methanococcus maripaludis (strain C7 /

Query: 1 PNEWRER 7
P EW+ R
Sbjct: 57 PKEWKRR 63


>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 EWRERTDF 10
+W+E DF
Sbjct: 432 DWKEALDF 439


>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PNEWRE 6
PNE+RE
Sbjct: 440 PNEYRE 445




22|SequenceR|115|106|AWGMLPNEWR

>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 4 MLPNEW 9
+LPNEW
Sbjct: 856 ILPNEW 861


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 LPNEWR 10
LP+EWR
Sbjct: 191 LPDEWR 196


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 4 MLPNEW 9
+LPNEW
Sbjct: 496 ILPNEW 501


>sp|PGP_PICTO|PHOSPHOGLYCOLATE phosphatase|Picrophilus torridus (strain ATCC 700027

Query: 1 AWGMLPNEWR 10
A G+L N WR
Sbjct: 110 ARGILTNRWR 119


>sp|RS15_METJA|SMALL ribosomal subunit protein uS15|Methanocaldococcus jannaschii

Query: 3 GMLPNEWR 10
G+LP +WR
Sbjct: 133 GVLPADWR 140


>sp|IF2A_THEGJ|TRANSLATION initiation factor 2 subunit|Thermococcus gammatolerans (strain DSM

Query: 3 GMLPNEW 9
G++P+EW
Sbjct: 153 GLIPDEW 159


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 MLPNEWR 10
++PNEWR
Sbjct: 835 IVPNEWR 841


>sp|RS15_PYRAB|SMALL ribosomal subunit protein uS15|Pyrococcus abyssi (strain GE5 /

Query: 3 GMLPNEWR 10
G LP +WR
Sbjct: 140 GKLPKDWR 147


>sp|RL3_CALMQ|LARGE ribosomal subunit protein uL3|Caldivirga maquilingensis (strain

Query: 1 AWGMLPNEWR 10
AW +PNE R
Sbjct: 105 AWVNIPNEVR 114


>sp|HISX_HALSA|HISTIDINOL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 5 LPNEWR 10
LP++WR
Sbjct: 97 LPDDWR 102


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 4 MLPNEWR 10
+LP+EWR
Sbjct: 177 LLPSEWR 183


>sp|RS15_PYRHO|SMALL ribosomal subunit protein uS15|Pyrococcus horikoshii (strain ATCC

Query: 3 GMLPNEWR 10
G LP +WR
Sbjct: 140 GKLPRDWR 147


>sp|RS15_SULTO|SMALL ribosomal subunit protein uS15|Sulfurisphaera tokodaii (strain DSM

Query: 3 GMLPNEWR 10
G LP EW+
Sbjct: 131 GKLPKEWK 138


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 2 WGMLPN 7
WG LPN
Sbjct: 53 WGCLPN 58


>sp|Y1807_METBF|PROTEIN Mbar_A1807|Methanosarcina barkeri (strain Fusaro /

Query: 3 GMLPNEW 9
G+LP+ W
Sbjct: 165 GLLPDAW 171


>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 2 WGMLPNEW 9
W M+P E+
Sbjct: 87 WHMIPKEY 94


>sp|RS15_METTH|SMALL ribosomal subunit protein uS15|Methanothermobacter

Query: 3 GMLPNEWR 10
G+LP WR
Sbjct: 116 GVLPEGWR 123


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AWGMLP 6
+WG+LP
Sbjct: 410 SWGVLP 415


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 GMLPNEW 9
G+LP +W
Sbjct: 736 GVLPEDW 742


>sp|RS15_METKA|SMALL ribosomal subunit protein uS15|Methanopyrus kandleri (strain AV19 /

Query: 3 GMLPNEWR 10
G+LP +W+
Sbjct: 133 GVLPEDWK 140


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 2 WGMLPN 7
WG LPN
Sbjct: 11 WGCLPN 16


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 2 WGMLPNEW 9
+G LP++W
Sbjct: 724 FGKLPDDW 731


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 WGMLPNEW 9
+G LP++W
Sbjct: 727 YGDLPDDW 734


>sp|RS15_NANEQ|SMALL ribosomal subunit protein uS15|Nanoarchaeum equitans (strain

Query: 3 GMLPNEWR 10
G+LP +W+
Sbjct: 135 GVLPKDWK 142


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 6 PNEWR 10
PNEW+
Sbjct: 275 PNEWK 279


>sp|RS15_SACS2|SMALL ribosomal subunit protein uS15|Saccharolobus solfataricus (strain

Query: 3 GMLPNEW 9
G LP EW
Sbjct: 131 GKLPQEW 137


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 2 WGMLPNEW 9
WG++ +W
Sbjct: 591 WGVINTDW 598


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 PNEWR 10
PNEW+
Sbjct: 275 PNEWK 279


>sp|RS15_METAR|SMALL ribosomal subunit protein uS15|Methanocella arvoryzae (strain DSM

Query: 1 AWGMLPNEW 9
A G+LP +W
Sbjct: 131 ATGVLPMDW 139


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 PNEWR 10
PNEW+
Sbjct: 275 PNEWK 279


>sp|RNP4_METST|RIBONUCLEASE P protein component 4|Methanosphaera stadtmanae (strain ATCC

Query: 5 LPNEWR 10
LPN WR
Sbjct: 54 LPNYWR 59


>sp|RS15_HYPBU|SMALL ribosomal subunit protein uS15|Hyperthermus butylicus (strain DSM

Query: 3 GMLPNEWR 10
G LP +W+
Sbjct: 132 GKLPRDWK 139


>sp|RS15_THEPD|SMALL ribosomal subunit protein uS15|Thermofilum pendens (strain DSM 2475

Query: 3 GMLPNEWR 10
G+LP +W+
Sbjct: 131 GILPPDWK 138


>sp|RS15_SULAC|SMALL ribosomal subunit protein uS15|Sulfolobus acidocaldarius (strain

Query: 3 GMLPNEW 9
G LP EW
Sbjct: 131 GKLPQEW 137


>sp|RS15_ARCFU|SMALL ribosomal subunit protein uS15|Archaeoglobus fulgidus (strain ATCC

Query: 3 GMLPNEWR 10
G+LP +W+
Sbjct: 133 GVLPADWK 140


>sp|MOBA_THEGJ|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus gammatolerans

Query: 5 LPNEWR 10
LP EWR
Sbjct: 168 LPEEWR 173




23|SequenceR|120|111|PDATSAWGML

>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 2 DATSAWGM 9
DAT WGM
Sbjct: 134 DATKYWGM 141


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DATSAWG 8
+AT+AWG
Sbjct: 517 EATTAWG 523


>sp|FTSZ1_METJA|CELL division protein FtsZ 1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PDATSAWG 8
P+AT WG
Sbjct: 313 PNATIIWG 320


>sp|FTSZ_METTH|CELL division protein FtsZ|Methanothermobacter thermautotrophicus

Query: 1 PDATSAWG 8
PDA WG
Sbjct: 314 PDANIIWG 321


>sp|FTSZ1_ARCFU|CELL division protein FtsZ 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PDATSAWGML 10
PDA WG +
Sbjct: 318 PDARIIWGAM 327


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 2 DATSAWGML 10
DA+ WG L
Sbjct: 133 DASKVWGKL 141


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 2 DATSAWGML 10
DA+ WG L
Sbjct: 133 DASKVWGKL 141


>sp|UVRC_HALSA|UVRABC system protein C|Halobacterium salinarum (strain ATCC 700922

Query: 1 PDATSAWG 8
PD T WG
Sbjct: 498 PDRTYDWG 505


>sp|UVRC_HALS3|UVRABC system protein C|Halobacterium salinarum (strain ATCC 29341

Query: 1 PDATSAWG 8
PD T WG
Sbjct: 498 PDRTYDWG 505


>sp|FTSZ1_HALVD|CELL division protein FtsZ 1|Haloferax volcanii (strain ATCC 29605

Query: 1 PDATSAWG 8
PDA WG
Sbjct: 325 PDARIIWG 332


>sp|HIS6_METPE|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaerula palustris

Query: 1 PDATSAW 7
PD T+ W
Sbjct: 148 PDGTTCW 154


>sp|FTSZ_HALMT|CELL division protein FtsZ|Haloferax mediterranei (strain ATCC 33500

Query: 1 PDATSAWG 8
PDA WG
Sbjct: 323 PDARIIWG 330


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DATSAWG 8
D+TS WG
Sbjct: 324 DSTSRWG 330




24|SequenceR|125|116|VMNSLPDATS

>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 VMNSLPD 7
V NSLPD
Sbjct: 281 VTNSLPD 287


>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VMNSLPD 7
V NSLPD
Sbjct: 281 VTNSLPD 287


>sp|Y1488_METJA|UNCHARACTERIZED protein MJ1488|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VMNSLPDAT 9
++NS PD T
Sbjct: 77 IINSKPDGT 85




25|SequenceR|130|121|TSFTLVMNSL

***** No hits found ******


26|SequenceR|135|126|VADEKTSFTL

>sp|MPCT_HALS3|TRANSDUCER protein MpcT|Halobacterium salinarum (strain ATCC 29341

Query: 2 ADEKTSFT 9
AD+++SFT
Sbjct: 615 ADDRSSFT 622


>sp|RIBB_METJA|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DEKTSFTL 10
DEK+SF++
Sbjct: 96 DEKSSFSI 103




27|SequenceR|140|131|KEAFSVADEK

>sp|METK_PYRAB|S-ADENOSYLMETHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 KEAFSVADE 9
K+A+S+ADE
Sbjct: 373 KDAYSIADE 381


>sp|AMTAB_ARCFU|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 KEAFSVAD 8
KEA SVAD
Sbjct: 79 KEALSVAD 86


>sp|METK_PYRFU|S-ADENOSYLMETHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KEAFSVADE 9
K+A+S+ADE
Sbjct: 373 KDAYSIADE 381


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 KEAFSVADE 9
+EAF+VA E
Sbjct: 22 REAFNVAQE 30


>sp|MTNA_PYRHO|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus horikoshii

Query: 1 KEAFSVADE 9
+EA+ +ADE
Sbjct: 134 QEAYKIADE 142


>sp|FTSZ2_METJA|CELL division protein FtsZ 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EAFSVADE 9
+AF VADE
Sbjct: 205 DAFKVADE 212




28|SequenceR|145|136|YSWGNKEAFS

>sp|RL37_THEPD|LARGE ribosomal subunit protein eL37|Thermofilum pendens (strain DSM

Query: 1 YSWGNKEAFS 10
YSW NK+A +
Sbjct: 49 YSWQNKKAVT 58


>sp|Y1395_ARCFU|UPF0200/UPF0201 protein AF_1395|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SWGNKEA 8
SWG KEA
Sbjct: 151 SWGLKEA 157


>sp|ACDD_METTH|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanothermobacter

Query: 2 SWGNKEAF 9
+WG++EA+
Sbjct: 308 AWGSREAW 315


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SWGNKEA 8
SWGN+ A
Sbjct: 926 SWGNEGA 932


>sp|TF2B1_THEVO|TRANSCRIPTION initiation factor IIB 1|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SWGNKEAF 9
SW NK+++
Sbjct: 85 SWKNKDSY 92


>sp|TF2B1_THEAC|TRANSCRIPTION initiation factor IIB 1|Thermoplasma acidophilum (strain ATCC

Query: 2 SWGNKEAF 9
SW NK+++
Sbjct: 85 SWKNKDSY 92


>sp|Y067_METJA|UNCHARACTERIZED protein MJ0067|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 NKEAFS 10
NKEAFS
Sbjct: 57 NKEAFS 62


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 3 WGNKEAF 9
WG+KE F
Sbjct: 501 WGDKERF 507


>sp|HIS5_PYRAE|IMIDAZOLE glycerol phosphate synthase subunit|Pyrobaculum aerophilum (strain

Query: 3 WGNKEAFS 10
WG EA++
Sbjct: 138 WGENEAYT 145


>sp|RL37_STAMF|LARGE ribosomal subunit protein eL37|Staphylothermus marinus (strain

Query: 1 YSWGNKE 7
YSW NK+
Sbjct: 49 YSWQNKK 55


>sp|RL37_METTH|LARGE ribosomal subunit protein eL37|Methanothermobacter

Query: 1 YSWGNKE 7
YSW NK+
Sbjct: 47 YSWQNKK 53


>sp|RL37_METST|LARGE ribosomal subunit protein eL37|Methanosphaera stadtmanae (strain

Query: 1 YSWGNKEAFS 10
YSW NK+ +
Sbjct: 47 YSWQNKKPVT 56


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 2 SWGNKEAFS 10
+WG+++AF+
Sbjct: 388 NWGDEKAFA 396




29|SequenceR|150|141|REEIDYSWGN

>sp|KUP_METHJ|PROBABLE potassium transport system protein|Methanospirillum hungatei JF-1

Query: 1 REEIDYSWG 9
RE I Y+WG
Sbjct: 246 REPIQYAWG 254


>sp|SPSS1_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EEIDYSWGN 10
E++DY +GN
Sbjct: 161 EQVDYQYGN 169


>sp|DPCKG_THEPD|GTP-DEPENDENT dephospho-CoA kinase|Thermofilum pendens (strain DSM 2475

Query: 1 REEIDYSWG 9
R E+ YSWG
Sbjct: 8 RRELSYSWG 16


>sp|PYRB_METMA|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina mazei

Query: 1 REEIDY 6
REEIDY
Sbjct: 17 REEIDY 22


>sp|AATB_METM5|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C5 /

Query: 2 EEIDYSWG 9
E +DY WG
Sbjct: 430 ETLDYIWG 437


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 REEIDYSWG 9
R E+D+ WG
Sbjct: 159 RSEMDWLWG 167


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 2 EEIDYSW 8
E+I+Y+W
Sbjct: 173 EDIEYAW 179


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain ATCC

Query: 2 EEIDYSW 8
EEI+Y+W
Sbjct: 385 EEIEYTW 391


>sp|RNH2_METLZ|RIBONUCLEASE HII|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 EEIDYSW 8
EEI +SW
Sbjct: 52 EEITFSW 58


>sp|RL4_ARCFU|LARGE ribosomal subunit protein uL4|Archaeoglobus fulgidus (strain ATCC

Query: 4 IDYSWGN 10
+DYSW N
Sbjct: 54 VDYSWEN 60


>sp|SPSS1_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanoregula boonei (strain DSM 21154

Query: 2 EEIDYSWGN 10
+ +DY +GN
Sbjct: 161 DHVDYQYGN 169


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 REEIDYSW 8
R E+D+SW
Sbjct: 296 RTELDFSW 303


>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 REEIDYSWGN 10
+ EI+ SW N
Sbjct: 247 KHEIEISWEN 256


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 REEIDYSWG 9
R++ID WG
Sbjct: 165 RQKIDLIWG 173


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EIDYSWG 9
EI Y+WG
Sbjct: 333 EISYTWG 339


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 2 EEIDYSW 8
EE+D SW
Sbjct: 277 EEMDASW 283


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EEIDYSW 8
+E+D+SW
Sbjct: 364 KELDFSW 370


>sp|SPSS_METMJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EEIDYSWGN 10
+ +DY +GN
Sbjct: 161 DHVDYQFGN 169


>sp|SPSS1_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 EEIDYSWGN 10
+ +DY +GN
Sbjct: 161 DHVDYQFGN 169


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 EEIDYS 7
EEIDYS
Sbjct: 301 EEIDYS 306


>sp|VAPB4_ARCFU|PUTATIVE antitoxin VapB4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EEIDYSWG 9
EEID WG
Sbjct: 55 EEIDDFWG 62


>sp|RSMA_PYRAB|PROBABLE ribosomal RNA small subunit|Pyrococcus abyssi (strain GE5 /

Query: 5 DYSWGN 10
+YSW N
Sbjct: 83 EYSWNN 88


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 EIDYSW 8
E+D+SW
Sbjct: 363 ELDFSW 368


>sp|SYFA_METHJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 REEIDYSWG 9
REE+ WG
Sbjct: 423 REEVTAPWG 431


>sp|RSMA_PYRHO|PROBABLE ribosomal RNA small subunit|Pyrococcus horikoshii (strain ATCC

Query: 5 DYSWGN 10
+YSW N
Sbjct: 83 EYSWNN 88


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 4 IDYSWGN 10
+DY+W N
Sbjct: 264 LDYTWSN 270




30|SequenceR|155|146|PKPVKREEID

>sp|ENDA_PYRAR|TRNA-SPLICING endonuclease|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 VKREEID 10
VKREE+D
Sbjct: 36 VKREEVD 42


>sp|NIFH_METHJ|NITROGENASE iron protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PKPVKREEID 10
PKP++ EE++
Sbjct: 254 PKPLEIEELE 263


>sp|ARGD_METTH|ACETYLORNITHINE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 PKPVKREEID 10
P +K+EEID
Sbjct: 368 PLVIKKEEID 377


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PKPVKREEI 9
PK V+REE+
Sbjct: 42 PKNVRREEV 50


>sp|POK_THEKO|PANTOATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KPVKREEID 10
+PVKREE +
Sbjct: 61 EPVKREEAE 69


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 PKPVKREEID 10
PK V +EEID
Sbjct: 145 PKDVVKEEID 154


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 1 PKPVKREEID 10
PKPV +ID
Sbjct: 227 PKPVGHYQID 236


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 1 PKPVKREEID 10
PKPV +ID
Sbjct: 227 PKPVGHYQID 236


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 1 PKPVKREEID 10
PKPV +ID
Sbjct: 227 PKPVGHYQID 236


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 1 PKPVKREEID 10
PKPV +ID
Sbjct: 227 PKPVGHYQID 236


>sp|NIFH_METJA|NITROGENASE iron protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKPVKREEID 10
P P+ EE+D
Sbjct: 254 PNPLSEEELD 263


>sp|ENDA_PYRNV|TRNA-SPLICING endonuclease|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 VKREEID 10
VKR+E+D
Sbjct: 36 VKRDEVD 42


>sp|DHE2_SACS2|GLUTAMATE dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PKPVKREEID 10
PK + REE++
Sbjct: 116 PKKLTREELE 125


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 PKPVKRE 7
P+PVKR+
Sbjct: 192 PRPVKRK 198


>sp|ENDA_PYRIL|TRNA-SPLICING endonuclease|Pyrobaculum islandicum (strain DSM 4184

Query: 4 VKREEID 10
V+REE+D
Sbjct: 36 VRREEVD 42




31|SequenceR|160|151|YSKSKPKPVK

>sp|Y1488_METJA|UNCHARACTERIZED protein MJ1488|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YSKSKPKPVK 10
+ KSKPKP K
Sbjct: 242 FLKSKPKPSK 251


>sp|SYH_METTH|HISTIDINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 KSKPKPVK 10
+ KPKP+K
Sbjct: 92 QKKPKPIK 99


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 1 YSKSKPKP 8
YS+S PKP
Sbjct: 159 YSESTPKP 166


>sp|SYH_METM7|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 KSKPKPVK 10
K+ PKPVK
Sbjct: 93 KNTPKPVK 100


>sp|SYH_METM5|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 KSKPKPVK 10
K+ PKPVK
Sbjct: 93 KNTPKPVK 100


>sp|SYH_METVS|HISTIDINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 KSKPKPVK 10
K+ PKPVK
Sbjct: 91 KNTPKPVK 98


>sp|SYH_METM6|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 KSKPKPVK 10
K+ PKPVK
Sbjct: 93 KNTPKPVK 100


>sp|SYH_METMP|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 KSKPKPVK 10
K+ PKPVK
Sbjct: 91 KNTPKPVK 98


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YSKSKPKPV 9
Y K K KPV
Sbjct: 216 YCKDKEKPV 224


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YSKSKPKPVK 10
++K+KPK VK
Sbjct: 68 FNKNKPKEVK 77


>sp|PELO_KORCO|PROTEIN pelota homolog|Korarchaeum cryptofilum (strain OPF8)

Query: 1 YSKSKPKPV 9
YSK KP+ +
Sbjct: 192 YSKIKPRAI 200


>sp|PURO_NATPD|IMP cyclohydrolase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YSKSKPKP 8
Y KS+P+P
Sbjct: 140 YEKSEPEP 147


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 KPKPVK 10
KP+PVK
Sbjct: 191 KPRPVK 196


>sp|ASSY_SULAC|ARGININOSUCCINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YSKSKPKPVK 10
Y+KSK P+K
Sbjct: 155 YAKSKGIPIK 164




32|SequenceR|165|156|SFNAGYSKSK

>sp|HPRT_METTP|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 5 GYSKSK 10
GYSKSK
Sbjct: 100 GYSKSK 105


>sp|PIMT_META3|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 NAGYSKSK 10
NAGY K+K
Sbjct: 15 NAGYLKNK 22


>sp|GATD_METS5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Metallosphaera sedula (strain ATCC

Query: 2 FNAGYSKSK 10
+NAG+S +K
Sbjct: 56 YNAGFSVNK 64


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SFNAGYSKSK 10
S N+G++K+K
Sbjct: 357 SINSGFNKTK 366




33|SequenceR|175|161|KTSVRTRKNWSFNAG

>sp|QUEE_PYRAE|7-CARBOXY-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 6 TRKNWSFNAG 15
T+ +W FNAG
Sbjct: 44 TKYSWDFNAG 53


>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KTSVRTRKNW 10
KTSV KNW
Sbjct: 157 KTSVVNEKNW 166


>sp|ASPD_ARCFU|L-ASPARTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 TRKNW 10
TRKNW
Sbjct: 132 TRKNW 136


>sp|SECF_THEGJ|PROTEIN-EXPORT membrane protein SecF|Thermococcus gammatolerans (strain DSM 15229

Query: 10 WSFNAG 15
W FNAG
Sbjct: 290 WIFNAG 295


>sp|METE_THEVO|METHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 TSVRTRKNWSFN 13
T T +WSFN
Sbjct: 126 TGPYTMMDWSFN 137


>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 3 SVRTRKNWSFNAG 15
S R++WS N G
Sbjct: 2 SYMERESWSSNLG 14


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TSVRTRKNWSFN 13
TSV R+N FN
Sbjct: 141 TSVIARENGMFN 152


>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 RTRKNWSFN 13
R+RK W ++
Sbjct: 24 RSRKGWDYH 32


>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii (strain

Query: 1 KTSVRTRKNW 10
KTS+R KN+
Sbjct: 419 KTSLRYNKNY 428


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 7 RKNWSFN 13
+ NWS+N
Sbjct: 394 KDNWSYN 400


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 RTRKNWSFN 13
R+RK W ++
Sbjct: 24 RSRKGWDYH 32


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 VRTRKNWSFN 13
+ TR+NW N
Sbjct: 204 LNTRENWKPN 213




34|SequenceR|175|166|KTSVRTRKNW

>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KTSVRTRKNW 10
KTSV KNW
Sbjct: 157 KTSVVNEKNW 166


>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii (strain

Query: 1 KTSVRTRKNW 10
KTS+R KN+
Sbjct: 419 KTSLRYNKNY 428




THE END