1|SequenceR|10|1|FGCLARLAAM
>sp|UL03_HCMVA|UNCHARACTERIZED protein UL3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GCLARLAA 9
GC+ RLA+
Sbjct: 18 GCITRLAS 25
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 FGCLARLA 8
F CL RLA
Sbjct: 622 FTCLLRLA 629
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 FGCLARLAAM 10
FG ARL M
Sbjct: 839 FGTFARLLLM 848
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 FGCLARLAAM 10
FG ARL M
Sbjct: 839 FGTFARLLLM 848
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 FGCLARLAAM 10
FG ARL M
Sbjct: 839 FGTFARLLLM 848
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 FGCLARLAAM 10
FG ARL M
Sbjct: 839 FGTFARLLLM 848
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 FGCLARLAAM 10
FG ARL M
Sbjct: 839 FGTFARLLLM 848
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 GCLARLAA 9
GC RLAA
Sbjct: 451 GCPERLAA 458
>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GCLAR 6
GCLAR
Sbjct: 216 GCLAR 220
>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GCLAR 6
GCLAR
Sbjct: 216 GCLAR 220
>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GCLAR 6
GCLAR
Sbjct: 216 GCLAR 220
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 1 FGCLARLAA 9
F CL LAA
Sbjct: 173 FACLVYLAA 181
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 FGCLARLAAM 10
F CL RLA
Sbjct: 623 FTCLLRLAGQ 632
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 1 FGCLARLAA 9
F CL LAA
Sbjct: 664 FVCLVALAA 672
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 1 FGCLARLAA 9
F CL LAA
Sbjct: 662 FVCLVALAA 670
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 FGCLARLAAM 10
F CL RLA
Sbjct: 623 FTCLLRLAGQ 632
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 FGCLARLA 8
F CL RLA
Sbjct: 622 FTCLLRLA 629
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 FGCLARLA 8
F CL RLA
Sbjct: 622 FTCLLRLA 629
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 FGCLARLA 8
F CL RLA
Sbjct: 622 FTCLLRLA 629
2|SequenceR|15|6|AAVGRFGCLA
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 VGRFGCLA 10
+GR GC+A
Sbjct: 645 LGRSGCIA 652
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 VGRFGCL 9
VGR+ CL
Sbjct: 135 VGRYDCL 141
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VGRFGCL 9
VGR+ CL
Sbjct: 135 VGRYDCL 141
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 6 FGCLA 10
FGCLA
Sbjct: 1063 FGCLA 1067
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 6 FGCLA 10
FGCLA
Sbjct: 1071 FGCLA 1075
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 6 FGCLA 10
FGCLA
Sbjct: 1071 FGCLA 1075
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 6 FGCLA 10
FGCLA
Sbjct: 1071 FGCLA 1075
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 AAVGRFG 7
+A GRFG
Sbjct: 379 SAAGRFG 385
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 3 VGRFGCLA 10
+GR GCL
Sbjct: 716 LGRNGCLG 723
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VGRFGCLA 10
+GR GCL
Sbjct: 1039 LGRNGCLG 1046
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 AAVGRFG 7
AA+G+FG
Sbjct: 1346 AALGQFG 1352
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 AAVGRFG 7
AAVG FG
Sbjct: 1349 AAVGIFG 1355
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 VGRFGC 8
+G FGC
Sbjct: 1323 LGSFGC 1328
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AAVGRFGC 8
A +GR GC
Sbjct: 260 ACMGRCGC 267
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AAVGRFGC 8
A +GR GC
Sbjct: 259 ACMGRCGC 266
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 VGRFGCL 9
+GR GC+
Sbjct: 638 LGRSGCI 644
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 VGRFGCL 9
+GR GC+
Sbjct: 639 LGRSGCI 645
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 AAVGRFGCLA 10
+ + FGCL+
Sbjct: 671 SVIRSFGCLS 680
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 AAVGRFGCLA 10
+ + FGCL+
Sbjct: 671 SVIRSFGCLS 680
3|SequenceR|20|11|PRLVQAAVGR
***** No hits found ******
4|SequenceR|25|16|RVGAGPRLVQ
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 RVGAGPRLV 9
R G+GPR+
Sbjct: 596 RCGSGPRIT 604
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 3 GAGPRLVQ 10
G+GPRL Q
Sbjct: 71 GSGPRLRQ 78
Query: 1 RVGAGP 6
R+GAGP
Sbjct: 586 RLGAGP 591
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 VGAGPRLVQ 10
+GA P+L Q
Sbjct: 1219 LGASPQLAQ 1227
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 RVGAGPRLVQ 10
+VG PR++Q
Sbjct: 583 QVGRRPRVIQ 592
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 GAGPRLVQ 10
GAGPR+ Q
Sbjct: 71 GAGPRVRQ 78
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 GAGPRLVQ 10
GAGPR+ Q
Sbjct: 71 GAGPRVRQ 78
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 GAGPRLVQ 10
GAGPR+ Q
Sbjct: 71 GAGPRVRQ 78
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 GAGPRLVQ 10
GAGPR+ Q
Sbjct: 71 GAGPRVRQ 78
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 GAGPRLVQ 10
GAGPR+ Q
Sbjct: 71 GAGPRVRQ 78
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 AGPRLVQ 10
GPRLV+
Sbjct: 2426 GGPRLVR 2432
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 RVGAGPRLVQ 10
R+G GP++ +
Sbjct: 927 RLGVGPQVTE 936
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 RVGAGPRLVQ 10
R+G GP++ +
Sbjct: 926 RLGVGPQVTE 935
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 RVGAGPRLVQ 10
R+G GP++ +
Sbjct: 926 RLGVGPQVTE 935
5|SequenceR|30|21|PQIPLRVGAG
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 PLRVGAG 10
PL+VGAG
Sbjct: 1324 PLKVGAG 1330
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 PLRVGAG 10
PL+VGAG
Sbjct: 1324 PLKVGAG 1330
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 1 PQIPLRVGAG 10
PQ+ L+VG G
Sbjct: 7 PQLVLQVGKG 16
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 1 PQIPLRVGAG 10
PQ+ L+VG G
Sbjct: 7 PQLVLQVGKG 16
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 PQIPLRVGAG 10
PQ+ L+VG G
Sbjct: 7 PQLVLQVGKG 16
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 PQIPLRVGAG 10
PQ+ L+VG G
Sbjct: 7 PQLVLQVGKG 16
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PQIPLRVGAG 10
PQ+ L+VG G
Sbjct: 7 PQLVLQVGKG 16
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 1 PQIPLRVGAG 10
PQ+ L+VG G
Sbjct: 7 PQLVLQVGKG 16
>sp|NEF_HV1S9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 70 PQVPLR 75
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQIPLR
Sbjct: 69 PQIPLR 74
>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 82 PQVPLR 87
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 74 PQVPLR 79
>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 73 PQVPLR 78
>sp|NEF_HV1S3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 71 PQVPLR 76
>sp|NEF_HV1MP|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 67 PQVPLR 72
>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 74 PQVPLR 79
>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 78 PQVPLR 83
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 74 PQVPLR 79
>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 76 PQVPLR 81
>sp|NEF_HV197|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 72 PQVPLR 77
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 73 PQVPLR 78
>sp|NEF_HV1SC|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 72 PQVPLR 77
>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 73 PQVPLR 78
>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 73 PQVPLR 78
>sp|NEF_HV1LW|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 72 PQVPLR 77
>sp|NEF_HV1YF|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 78 PQVPLR 83
>sp|NEF_HV1U4|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 72 PQVPLR 77
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 72 PQVPLR 77
>sp|NEF_HV190|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 73 PQVPLR 78
>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 67 PQVPLR 72
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 73 PQVPLR 78
>sp|NEF_HV1Y2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 82 PQVPLR 87
>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 72 PQVPLR 77
>sp|NEF_HV192|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 72 PQVPLR 77
>sp|NEF_HV1H2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 72 PQVPLR 77
>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 84 PQVPLR 89
>sp|NEF_HV1B9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 73 PQVPLR 78
>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 81 PQVPLR 86
>sp|NEF_HV1OY|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 77 PQVPLR 82
>sp|NEF_HV1BR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 72 PQVPLR 77
>sp|NEF_HV1V9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 73 PQVPLR 78
>sp|NEF_HV1B1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 72 PQVPLR 77
>sp|NEF_HV112|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 72 PQVPLR 77
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 72 PQVPLR 77
>sp|NEF_HV1H3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 72 PQVPLR 77
>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 78 PQVPLR 83
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 73 PQVPLR 78
>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 77 PQVPLR 82
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 IPLRVG 8
IP+RVG
Sbjct: 240 IPIRVG 245
>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 75 PQVPLR 80
>sp|RP22_VAR67|DNA-DIRECTED RNA polymerase 22 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 PQIPLRV 7
P IPL++
Sbjct: 155 PNIPLKI 161
>sp|RP22_VACCC|DNA-DIRECTED RNA polymerase 22 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PQIPLRV 7
P IPL++
Sbjct: 155 PNIPLKI 161
>sp|RP22_MONPV|DNA-DIRECTED RNA polymerase 22 kDa|Monkeypox virus (MPXV)
Query: 1 PQIPLRV 7
P IPL++
Sbjct: 155 PNIPLKI 161
>sp|NEF_HV1MA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 75 PQVPLR 80
>sp|NEF_HV1Z2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+PLR
Sbjct: 73 PQVPLR 78
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 QIPLRVG 8
Q+P R+G
Sbjct: 1082 QVPQRIG 1088
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 QIPLRVG 8
Q+P R+G
Sbjct: 1083 QVPQRIG 1089
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 PQIPLR 6
P++PLR
Sbjct: 104 PRVPLR 109
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 1 PQIPLRVGAG 10
PQ+ + VG G
Sbjct: 7 PQLVIYVGKG 16
>sp|NEF_HV1VI|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQIPLR 6
PQ+P+R
Sbjct: 72 PQVPVR 77
>sp|NEF_HV2G1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 PQIPLR 6
P++PLR
Sbjct: 104 PRVPLR 109
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 QIPLRVG 8
+IP+R+G
Sbjct: 212 RIPVRIG 218
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PQIPLRVG 8
PQ+ LR G
Sbjct: 383 PQVQLRAG 390
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 PQIPLR 6
P++PLR
Sbjct: 104 PKVPLR 109
>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 PQIPLR 6
P++PLR
Sbjct: 104 PRVPLR 109
6|SequenceR|35|26|RVGRSPQIPL
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RVGRSPQ 7
RVGR+PQ
Sbjct: 1934 RVGRNPQ 1940
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RVGRSPQ 7
RVGR+PQ
Sbjct: 1934 RVGRNPQ 1940
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RVGRSPQ 7
RVGR+PQ
Sbjct: 1934 RVGRNPQ 1940
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RVGRSPQ 7
RVGR+PQ
Sbjct: 1934 RVGRNPQ 1940
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RVGRSPQ 7
RVGR+PQ
Sbjct: 1934 RVGRNPQ 1940
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 RVGRSPQIP 9
R+GR+P P
Sbjct: 1961 RIGRNPNKP 1969
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 RVGRSPQIP 9
R+GR+P P
Sbjct: 1957 RIGRNPNKP 1965
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 RVGRSPQIP 9
R+GR+P P
Sbjct: 1961 RIGRNPNKP 1969
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 3 GRSPQI 8
GRSPQI
Sbjct: 122 GRSPQI 127
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 4 RSPQIPL 10
+SPQ PL
Sbjct: 1701 KSPQAPL 1707
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 RSPQIPL 10
R PQ+PL
Sbjct: 2809 RDPQVPL 2815
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 RSPQIPL 10
R PQ+PL
Sbjct: 2809 RDPQVPL 2815
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 RVGRSPQ 7
R+GR+P+
Sbjct: 1950 RIGRNPE 1956
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 RVGRSP 6
RVGR+P
Sbjct: 1930 RVGRNP 1935
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 RVGRSP 6
RVGR+P
Sbjct: 1965 RVGRNP 1970
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 RVGRSP 6
RVGR+P
Sbjct: 1964 RVGRNP 1969
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 RVGRSP 6
RVGR+P
Sbjct: 1965 RVGRNP 1970
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 RVGRSP 6
RVGR+P
Sbjct: 1965 RVGRNP 1970
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 RVGRSP 6
RVGR+P
Sbjct: 1965 RVGRNP 1970
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RVGRSPQ 7
R+GR+P+
Sbjct: 1935 RIGRNPK 1941
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RVGRSPQ 7
R+GR+P+
Sbjct: 1935 RIGRNPK 1941
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 RVGRSPQ 7
R+GR+P+
Sbjct: 1935 RIGRNPK 1941
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RVGRSPQ 7
R+GR+P+
Sbjct: 1935 RIGRNPK 1941
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RVGRSPQ 7
R+GR+P+
Sbjct: 1935 RIGRNPK 1941
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 RVGRSP 6
RVGR+P
Sbjct: 1964 RVGRNP 1969
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 5 SPQIPL 10
SPQ+P+
Sbjct: 313 SPQVPI 318
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 2 VGRSPQIP 9
VG++ Q+P
Sbjct: 189 VGKTSQVP 196
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 VGRSPQIP 9
VG++ Q+P
Sbjct: 189 VGKTSQVP 196
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 RVGRSP 6
RVGR+P
Sbjct: 1964 RVGRNP 1969
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 2 VGRSPQIP 9
VG++ Q+P
Sbjct: 189 VGKTSQVP 196
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VGRSPQIP 9
VG++ Q+P
Sbjct: 189 VGKTSQVP 196
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 2 VGRSPQIP 9
VG++ Q+P
Sbjct: 189 VGKTSQVP 196
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RVGRSPQ 7
R+GR+P+
Sbjct: 1935 RIGRNPR 1941
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RVGRSPQ 7
R+GR+P+
Sbjct: 1935 RIGRNPR 1941
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 2 VGRSPQIP 9
VG++ Q+P
Sbjct: 189 VGKTSQVP 196
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VGRSPQIPL 10
VGR P +P+
Sbjct: 913 VGRPPSVPV 921
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 VGRSPQIPL 10
VGR P +P+
Sbjct: 912 VGRPPSVPV 920
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RVGRSPQ 7
R+GR+P+
Sbjct: 1525 RIGRNPR 1531
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 4 RSPQIPL 10
R PQ PL
Sbjct: 45 RGPQTPL 51
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 RVGRSPQIPL 10
R+G QIPL
Sbjct: 1430 RIGGLDQIPL 1439
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 RVGRSPQIPL 10
R+G QIPL
Sbjct: 1430 RIGGLDQIPL 1439
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 RVGRSPQIPL 10
R+G QIPL
Sbjct: 1430 RIGGLDQIPL 1439
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1962 RIGRNP 1967
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 RVGRSP 6
RVGR P
Sbjct: 1958 RVGRDP 1963
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1948 RIGRNP 1953
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1948 RIGRNP 1953
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1959 RIGRNP 1964
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1948 RIGRNP 1953
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1948 RIGRNP 1953
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1948 RIGRNP 1953
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1948 RIGRNP 1953
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1948 RIGRNP 1953
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1948 RIGRNP 1953
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1948 RIGRNP 1953
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1966 RIGRNP 1971
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1934 RIGRNP 1939
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1934 RIGRNP 1939
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1934 RIGRNP 1939
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1934 RIGRNP 1939
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RVGRSP 6
R+GR+P
Sbjct: 1934 RIGRNP 1939
>sp|UL39_HCMVA|UNCHARACTERIZED protein UL39|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VGRSPQIP 9
VG++PQ P
Sbjct: 74 VGQNPQAP 81
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 GRSPQI 8
GR+PQ+
Sbjct: 792 GRTPQV 797
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 GRSPQI 8
GR+PQ+
Sbjct: 792 GRTPQV 797
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 3 GRSPQI 8
GR+PQ+
Sbjct: 792 GRTPQV 797
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 GRSPQI 8
GR+PQ+
Sbjct: 792 GRTPQV 797
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 3 GRSPQI 8
GR+PQ+
Sbjct: 792 GRTPQV 797
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 6 PQIPL 10
PQIPL
Sbjct: 69 PQIPL 73
>sp|NEF_HV1LW|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 SPQIPL 10
+PQ+PL
Sbjct: 71 TPQVPL 76
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 GRSPQI 8
GR+PQ+
Sbjct: 790 GRTPQV 795
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 SPQIPL 10
+PQ+PL
Sbjct: 71 TPQVPL 76
7|SequenceR|40|31|DPQWQRVGRS
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQRVGR+
Sbjct: 416 WQRVGRA 422
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 WQRVGRS 10
WQR+G++
Sbjct: 3764 WQRIGKN 3770
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QWQRVGRS 10
WQR+GR+
Sbjct: 413 MWQRIGRA 420
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 DPQWQ 5
DP+WQ
Sbjct: 435 DPKWQ 439
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQRVG++
Sbjct: 417 WQRVGKA 423
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQRVG++
Sbjct: 422 WQRVGQA 428
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQRVG++
Sbjct: 432 WQRVGQA 438
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQRVG++
Sbjct: 427 WQRVGQA 433
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 WQRVGR 9
W+R GR
Sbjct: 648 WERAGR 653
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 WQRVGR 9
W+R GR
Sbjct: 648 WERAGR 653
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 3 QWQRVG 8
+W+RVG
Sbjct: 286 EWKRVG 291
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 3 QWQRVG 8
+W+RVG
Sbjct: 286 EWKRVG 291
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ VGR+
Sbjct: 418 WQEVGRA 424
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ+VG++
Sbjct: 414 WQKVGKA 420
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ+VG++
Sbjct: 423 WQKVGKA 429
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 QWQRVG 8
+WQR G
Sbjct: 2458 RWQRTG 2463
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 QWQRVG 8
+WQR G
Sbjct: 2459 RWQRTG 2464
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 QWQRVG 8
+WQR G
Sbjct: 2458 RWQRTG 2463
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 QWQRVG 8
+WQR G
Sbjct: 2419 RWQRTG 2424
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ+VG++
Sbjct: 427 WQKVGKA 433
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 QWQRVG 8
+WQR G
Sbjct: 2419 RWQRTG 2424
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ+VG++
Sbjct: 412 WQKVGQA 418
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ VGR+
Sbjct: 404 WQGVGRA 410
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ VGR+
Sbjct: 415 WQGVGRA 421
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQR G++
Sbjct: 415 WQRTGQA 421
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 4 WQRVGRS 10
W+++G++
Sbjct: 97 WEKIGKT 103
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 4 WQRVGRS 10
W+++G++
Sbjct: 97 WEKIGKT 103
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ+VG++
Sbjct: 420 WQKVGQA 426
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQR G++
Sbjct: 418 WQRTGQA 424
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ VGR+
Sbjct: 420 WQGVGRA 426
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QWQRVGRS 10
+WQ VG++
Sbjct: 416 RWQEVGKA 423
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 QWQRVG 8
+W RVG
Sbjct: 2441 RWNRVG 2446
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 QWQRVG 8
+W RVG
Sbjct: 2441 RWNRVG 2446
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 QWQRVG 8
+W RVG
Sbjct: 2433 RWNRVG 2438
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 QWQRVG 8
+W RVG
Sbjct: 2447 RWNRVG 2452
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ VG++
Sbjct: 421 WQEVGKA 427
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 DPQWQ 5
+PQWQ
Sbjct: 71 NPQWQ 75
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ VG++
Sbjct: 419 WQEVGKA 425
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ VG++
Sbjct: 434 WQEVGKA 440
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ VG++
Sbjct: 421 WQEVGKA 427
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 DPQWQ 5
+PQWQ
Sbjct: 71 NPQWQ 75
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ VG++
Sbjct: 414 WQEVGKA 420
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ VG++
Sbjct: 428 WQEVGKA 434
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ VG++
Sbjct: 421 WQEVGKA 427
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ VG++
Sbjct: 427 WQEVGKA 433
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WQRVGRS 10
WQ VG++
Sbjct: 424 WQEVGKA 430
8|SequenceR|45|36|QAWEVDPQWQ
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 1 QAWEVDPQW 9
QA+ + PQW
Sbjct: 139 QAYRLSPQW 147
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 4 EVDPQWQ 10
+ DP+WQ
Sbjct: 433 DFDPKWQ 439
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 QAWEVDPQW 9
++W VD QW
Sbjct: 486 ESWIVDRQW 494
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 QAWEVDPQW 9
++W VD QW
Sbjct: 486 ESWIVDRQW 494
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 QAWEVDPQW 9
++W VD QW
Sbjct: 486 ESWIVDRQW 494
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 QAWEVDPQW 9
++W VD QW
Sbjct: 486 ESWIVDRQW 494
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 QAWEVDPQW 9
++W VD QW
Sbjct: 486 ESWIVDRQW 494
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 QAWEVDPQW 9
++W VD QW
Sbjct: 486 ESWIVDRQW 494
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 QAWEVDPQW 9
++W VD QW
Sbjct: 486 ESWIVDRQW 494
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 AWEVDPQW 9
+W VD QW
Sbjct: 487 SWIVDRQW 494
Query: 2 AWEVDPQW 9
+W++D +W
Sbjct: 1568 SWKLDGKW 1575
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 AWEVDPQWQ 10
A++VD WQ
Sbjct: 293 AFKVDANWQ 301
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 AWEVDPQW 9
+W VD QW
Sbjct: 487 SWIVDRQW 494
Query: 2 AWEVDPQW 9
+W++D +W
Sbjct: 1568 SWKLDGKW 1575
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 AWEVDPQW 9
+W VD QW
Sbjct: 487 SWIVDRQW 494
Query: 2 AWEVDPQW 9
+W++D +W
Sbjct: 1568 SWKLDGRW 1575
>sp|REV_HV1AN|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 QAWEVDPQWQ 10
+AW VDP+ +
Sbjct: 91 EAWTVDPRAE 100
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 3 WEVDPQW 9
W PQW
Sbjct: 203 WSEGPQW 209
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 204 KAWLVHRQW 212
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 AWEVDPQW 9
AW V+ QW
Sbjct: 482 AWLVNKQW 489
Query: 2 AWEVDPQW 9
W++D +W
Sbjct: 1562 GWKLDAKW 1569
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 204 KAWLVHRQW 212
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 1 QAWEVDPQ 8
+ W +DP+
Sbjct: 541 EDWSIDPK 548
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 1 QAWEVDPQ 8
+ W +DP+
Sbjct: 541 EDWSIDPK 548
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 3 WEVDPQW 9
W PQW
Sbjct: 203 WSEGPQW 209
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 384 KAWLVHRQW 392
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 253 KAWLVHRQW 261
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AWEVDPQWQ 10
W + QWQ
Sbjct: 1555 GWRLSAQWQ 1563
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 482 KAWMVHRQW 490
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AWEVDPQWQ 10
W + QWQ
Sbjct: 1555 GWRLSAQWQ 1563
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 482 KAWMVHRQW 490
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AWEVDPQWQ 10
W + QWQ
Sbjct: 1555 GWRLSAQWQ 1563
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 482 KAWMVHRQW 490
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AWEVDPQWQ 10
W + QWQ
Sbjct: 1555 GWRLSAQWQ 1563
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 482 KAWMVHRQW 490
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AWEVDPQWQ 10
W + QWQ
Sbjct: 1555 GWRLSAQWQ 1563
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 482 KAWMVHRQW 490
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 484 KAWLVHRQW 492
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 1 QAWEVDPQWQ 10
Q W++ W+
Sbjct: 505 QTWKIISSWE 514
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 QAWEVDPQW 9
++W V QW
Sbjct: 484 KSWLVHKQW 492
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 204 KAWLVHRQW 212
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 QAWEVDPQW 9
++W V QW
Sbjct: 484 KSWLVHKQW 492
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 QAWEVDPQW 9
QA DP+W
Sbjct: 391 QALCEDPEW 399
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 484 KAWLVHRQW 492
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 484 KAWLVHRQW 492
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 AWEVDPQW 9
AW +D +W
Sbjct: 1574 AWGLDKKW 1581
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 484 KAWLVHRQW 492
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 484 KAWLVHRQW 492
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 484 KAWLVHRQW 492
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 484 KAWLVHRQW 492
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 QAWEVDPQW 9
+AW V QW
Sbjct: 484 KAWLVHRQW 492
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 WEVDPQW 9
W++D +W
Sbjct: 1586 WKLDQKW 1592
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 3 WEVDP 7
WE DP
Sbjct: 431 WEKDP 435
9|SequenceR|50|41|AGGFQQAWEV
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 GGFQQAW 8
GG++Q W
Sbjct: 2007 GGYKQKW 2013
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 GGFQQAW 8
GG++Q W
Sbjct: 2007 GGYKQKW 2013
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 GGFQQAW 8
GG++Q W
Sbjct: 2007 GGYKQKW 2013
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 GGFQQAW 8
GG++Q W
Sbjct: 2007 GGYKQKW 2013
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 GGFQQAW 8
GG++Q W
Sbjct: 2007 GGYKQKW 2013
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 FQQAWE 9
FQ AWE
Sbjct: 2296 FQDAWE 2301
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 4 FQQAWE 9
FQ AWE
Sbjct: 2269 FQDAWE 2274
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 FQQAWE 9
FQ AWE
Sbjct: 2274 FQDAWE 2279
>sp|AP3A_SARS2|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 2 GGFQQAWE 9
GG+ + WE
Sbjct: 187 GGYTEKWE 194
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 GFQQAWE 9
GF+Q W+
Sbjct: 1542 GFRQEWD 1548
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 3 GFQQAWEV 10
GF+Q W +
Sbjct: 572 GFKQKWNL 579
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 2 GGFQQAWEV 10
GF+Q W +
Sbjct: 571 AGFKQKWNL 579
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 3 GFQQAWEV 10
GF+Q W +
Sbjct: 572 GFKQKWNL 579
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 1 AGGFQQAWEV 10
AGG + W+V
Sbjct: 152 AGGVVRLWDV 161
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GFQQAWEV 10
G Q+ WE+
Sbjct: 785 GIQRGWEI 792
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 4 FQQAW 8
FQ+AW
Sbjct: 655 FQKAW 659
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 4 FQQAW 8
FQ+AW
Sbjct: 655 FQKAW 659
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GFQQAWE 9
G Q+ WE
Sbjct: 780 GLQRGWE 786
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 3 GFQQAW 8
GF Q W
Sbjct: 464 GFDQGW 469
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 GFQQAWEV 10
GF++ W V
Sbjct: 2217 GFKEVWIV 2224
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 1 AGGFQQAWEV 10
AGG++ W +
Sbjct: 402 AGGYKFPWHL 411
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 AGGFQQ 6
AGGF+Q
Sbjct: 307 AGGFEQ 312
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 AGGFQQ 6
AGGF+Q
Sbjct: 307 AGGFEQ 312
>sp|UL126_HCMVA|UNCHARACTERIZED protein UL126|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GGFQQAWEV 10
GG + WEV
Sbjct: 42 GGRRVRWEV 50
10|SequenceR|55|46|SPYMVAGGFQ
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 SPYMVAGGFQ 10
SP+++AG Q
Sbjct: 803 SPFVIAGPLQ 812
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 PYMVAGGF 9
PY+V GF
Sbjct: 798 PYVVISGF 805
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 PYMVAGGF 9
PY+V GF
Sbjct: 798 PYVVISGF 805
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 2 PYMVAGG 8
PY V GG
Sbjct: 480 PYAVRGG 486
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PYMVAGG 8
PY V GG
Sbjct: 480 PYAVRGG 486
>sp|GL_HHV2H|ENVELOPE glycoprotein L|Human herpesvirus 2 (strain HG52)
Query: 1 SPYMVAGGF 9
+P++ A GF
Sbjct: 95 NPFLFAAGF 103
>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8
Query: 2 PYMVAGGFQ 10
P++ + GFQ
Sbjct: 31 PFVSSNGFQ 39
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 YMVAGG 8
YMV GG
Sbjct: 2234 YMVTGG 2239
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 YMVAGG 8
YMV GG
Sbjct: 2234 YMVTGG 2239
11|SequenceR|60|51|HATEKSPYMV
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 HATEKSPYM 9
HATE YM
Sbjct: 6392 HATEYREYM 6400
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 ATEKSPYMV 10
TEKSP+ +
Sbjct: 804 GTEKSPHSI 812
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 ATEKSPYMV 10
TEKSP+ +
Sbjct: 804 GTEKSPHSI 812
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 HATEKSP 7
H T+K+P
Sbjct: 3326 HQTDKTP 3332
>sp|YVCA_VACCC|UNCHARACTERIZED 8.0 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 KSPYM 9
KSPYM
Sbjct: 36 KSPYM 40
>sp|US05_HCMVA|UNCHARACTERIZED protein US5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ATEKSPYM 9
ATEK P++
Sbjct: 33 ATEKIPFV 40
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HATEKSP 7
H T+K+P
Sbjct: 682 HGTKKAP 688
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 HATEKSP 7
H T+K+P
Sbjct: 682 HGTKKAP 688
12|SequenceR|65|56|PPPKWHATEK
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 2 PPKWHATE 9
PP++H TE
Sbjct: 153 PPRYHKTE 160
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 PPPKWHATE 9
PP +W TE
Sbjct: 869 PPDRWWITE 877
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 PPPKWHATEK 10
P P WHA E+
Sbjct: 967 PEPTWHAFEE 976
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 PPPKWHATEK 10
P P WHA E+
Sbjct: 968 PEPTWHAFEE 977
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 PPPKWHATEK 10
P P WHA E+
Sbjct: 988 PEPTWHAFEE 997
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 PPPKWHATEK 10
P P WHA E+
Sbjct: 969 PEPTWHAFEE 978
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 3 PKWHATEK 10
P WHA K
Sbjct: 124 PLWHAMRK 131
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 PPPKWHATEK 10
PPP W A K
Sbjct: 1604 PPPSWDAMWK 1613
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPKWHATEK 10
PP+W E+
Sbjct: 240 PPRWERGEE 248
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPKWHATEK 10
PP+W E+
Sbjct: 240 PPRWERGEE 248
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 1 PPPKWHAT 8
PPP W+ +
Sbjct: 359 PPPYWYPS 366
>sp|YVAT_VACCC|UNCHARACTERIZED 8.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PPPKWHATEK 10
PPP H T +
Sbjct: 26 PPPTGHVTRE 35
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PKWHATEK 10
P WHA K
Sbjct: 133 PLWHALRK 140
>sp|PG065_VAR67|RNA-BINDING protein OPG065|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 PPKWHAT 8
PP+W T
Sbjct: 63 PPRWFMT 69
>sp|PG065_VACCC|RNA-BINDING protein OPG065|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PPKWHAT 8
PP+W T
Sbjct: 63 PPRWFMT 69
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 PPKWHATE 9
PP+W E
Sbjct: 429 PPRWGGKE 436
>sp|UL76_HCMVA|PROTEIN UL76|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 KWHAT 8
+WHAT
Sbjct: 115 RWHAT 119
>sp|UL135_HCMVM|PROTEIN UL135|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPPKWHATEK 10
PPP+W E+
Sbjct: 280 PPPRWSDIEE 289
>sp|UL135_HCMVT|PROTEIN UL135|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PPPKWHATEK 10
PPP+W E+
Sbjct: 280 PPPRWSDIEE 289
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 1 PPPKWH 6
PP K+H
Sbjct: 201 PPKKYH 206
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 5 WHATE 9
WHATE
Sbjct: 1549 WHATE 1553
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPPKWH 6
P P WH
Sbjct: 18 PTPGWH 23
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPPKWH 6
P P WH
Sbjct: 18 PTPGWH 23
>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 2 PPKWHATE 9
PP WH E
Sbjct: 317 PPNWHVPE 324
>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 KWHAT 8
+WHAT
Sbjct: 115 RWHAT 119
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 PPPKW 5
PPPKW
Sbjct: 1389 PPPKW 1393
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 4 KWHATE 9
KWH TE
Sbjct: 150 KWHKTE 155
>sp|PG065_MONPV|RNA-BINDING protein OPG065|Monkeypox virus (MPXV)
Query: 2 PPKWHAT 8
PP+W T
Sbjct: 26 PPRWSTT 32
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 5 WHATEK 10
WH TEK
Sbjct: 342 WHLTEK 347
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 3 PKWHATEK 10
P WHA +
Sbjct: 133 PLWHALRR 140
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 PPPKWHA 7
PPP+W A
Sbjct: 978 PPPEWSA 984
>sp|E3_YLDV|PROTEIN E3 homolog|Yaba-like disease virus (YLDV)
Query: 2 PPKW 5
PPKW
Sbjct: 66 PPKW 69
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 PPPKWHATE 9
PP KW T+
Sbjct: 1289 PPQKWSFTQ 1297
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 2 PPKWH 6
PP WH
Sbjct: 316 PPNWH 320
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 2 PPKWH 6
PP WH
Sbjct: 316 PPNWH 320
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 2 PPKWH 6
PP WH
Sbjct: 316 PPNWH 320
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 2 PPKWH 6
PP WH
Sbjct: 316 PPNWH 320
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 2 PPKWH 6
PP WH
Sbjct: 316 PPNWH 320
>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)
Query: 2 PPKWH 6
PP WH
Sbjct: 316 PPNWH 320
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 2 PPKWH 6
PP WH
Sbjct: 315 PPNWH 319
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 2 PPKWH 6
PP WH
Sbjct: 316 PPNWH 320
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 PPKWHATE 9
PP+W A +
Sbjct: 319 PPEWLARQ 326
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PPKWHATE 9
PP W + E
Sbjct: 63 PPIWRSKE 70
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PPKWHATE 9
PP W + E
Sbjct: 63 PPIWRSKE 70
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPPKWH 6
PP WH
Sbjct: 69 PPKGWH 74
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPPKWH 6
PP WH
Sbjct: 69 PPKGWH 74
13|SequenceR|70|61|DVDNWPPPKW
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 DVDNW 5
D+DNW
Sbjct: 328 DIDNW 332
>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)
Query: 4 NWPPP 8
NW PP
Sbjct: 43 NWAPP 47
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 DVDNW 5
D+DNW
Sbjct: 328 DIDNW 332
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 DVDNWPPPK 9
DV N PPP+
Sbjct: 1439 DVCNTPPPE 1447
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 DVDNWPPPK 9
D+D+W P +
Sbjct: 3193 DIDDWKPSQ 3201
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 VDNWPPPKW 10
+ +PPP++
Sbjct: 587 LQKYPPPRY 595
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 VDNWPPPKW 10
+ +PPP++
Sbjct: 587 LQKYPPPRY 595
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VDNWPPPKW 10
+ +PPP++
Sbjct: 588 LQKYPPPRY 596
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 VDNWPPPKW 10
+ +PPP++
Sbjct: 588 LQKYPPPRY 596
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 2 VDNWPPPKW 10
+ +PPP++
Sbjct: 588 LQKYPPPRY 596
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 DVDNWPPPKW 10
D + PP +W
Sbjct: 864 DCSSTPPDRW 873
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 6 PPPKW 10
PPPKW
Sbjct: 1389 PPPKW 1393
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VDNWPPPK 9
+D W PPK
Sbjct: 12 LDRWRPPK 19
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VDNWPPPK 9
+D W PPK
Sbjct: 12 LDRWRPPK 19
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 6 PPPKW 10
PPP W
Sbjct: 515 PPPLW 519
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 6 PPPKW 10
PPP W
Sbjct: 531 PPPLW 535
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 1 DVDNWPPP 8
DVD PPP
Sbjct: 114 DVDASPPP 121
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 6 PPPKW 10
PPP W
Sbjct: 500 PPPLW 504
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 PPPKW 10
PPP W
Sbjct: 1600 PPPSW 1604
>sp|E3GL_ADE06|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 6
Query: 5 WPPPK 9
WPP K
Sbjct: 113 WPPQK 117
>sp|E3GL_ADE02|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 2
Query: 5 WPPPK 9
WPP K
Sbjct: 113 WPPQK 117
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 6 PPPKW 10
PPP W
Sbjct: 531 PPPLW 535
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 PPPKW 10
PPP W
Sbjct: 1600 PPPSW 1604
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 PPPKW 10
PPP W
Sbjct: 1600 PPPSW 1604
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 PPPKW 10
PPP W
Sbjct: 1600 PPPSW 1604
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 PPPKW 10
PPP W
Sbjct: 1600 PPPSW 1604
>sp|VE5_HPV42|PROBABLE protein E5|Human papillomavirus 42
Query: 2 VDNWPPPKW 10
+ N+P P W
Sbjct: 39 LQNYPYPVW 47
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 PPPKW 10
PPP W
Sbjct: 1600 PPPSW 1604
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 6 PPPKW 10
PPP W
Sbjct: 1600 PPPSW 1604
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 6 PPPKW 10
PPP W
Sbjct: 1605 PPPSW 1609
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 1 DVDNWPPP 8
DVD PPP
Sbjct: 114 DVDASPPP 121
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 6 PPPKW 10
PPP W
Sbjct: 1601 PPPSW 1605
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 6 PPPKW 10
PPP W
Sbjct: 1604 PPPSW 1608
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 6 PPPKW 10
PPP W
Sbjct: 1600 PPPSW 1604
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 4 NWPPPKW 10
N P P+W
Sbjct: 836 NQPNPQW 842
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 4 NWPPPKW 10
N P P+W
Sbjct: 836 NQPNPQW 842
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 4 NWPPPKW 10
N P P+W
Sbjct: 836 NQPNPQW 842
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 6 PPPKW 10
PPP W
Sbjct: 359 PPPYW 363
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 DVDNWPPPK 9
D+ N PPP+
Sbjct: 1438 DICNTPPPE 1446
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 6 PPPKW 10
PPP W
Sbjct: 498 PPPLW 502
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 6 PPPKW 10
PPP W
Sbjct: 1605 PPPSW 1609
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 6 PPPKW 10
PPP W
Sbjct: 1604 PPPSW 1608
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 6 PPPKW 10
PPP W
Sbjct: 1600 PPPSW 1604
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 6 PPPKW 10
PPP W
Sbjct: 1598 PPPSW 1602
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 6 PPPKW 10
PPP W
Sbjct: 1604 PPPSW 1608
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 PPPKW 10
PPP W
Sbjct: 1600 PPPSW 1604
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 6 PPPKW 10
PPP W
Sbjct: 1604 PPPSW 1608
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 PPPKW 10
PPP W
Sbjct: 1600 PPPSW 1604
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 6 PPPKW 10
PPP W
Sbjct: 1604 PPPSW 1608
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 4 NWPPPKW 10
N P P+W
Sbjct: 836 NQPNPQW 842
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 4 NWPPPKW 10
N P P+W
Sbjct: 836 NQPNPQW 842
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 6 PPPKW 10
PPP W
Sbjct: 1602 PPPSW 1606
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 6 PPPKW 10
PPP W
Sbjct: 1606 PPPSW 1610
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 6 PPPKW 10
PPP W
Sbjct: 1600 PPPSW 1604
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 6 PPPKW 10
PPP W
Sbjct: 1606 PPPSW 1610
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 6 PPPKW 10
PPP W
Sbjct: 1601 PPPSW 1605
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 6 PPPKW 10
PPP W
Sbjct: 1601 PPPSW 1605
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 6 PPPKW 10
PPP W
Sbjct: 1604 PPPSW 1608
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 6 PPPKW 10
PPP W
Sbjct: 1604 PPPSW 1608
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 6 PPPKW 10
PPP W
Sbjct: 1604 PPPSW 1608
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 1 DVDNWPPP 8
DVD PPP
Sbjct: 114 DVDASPPP 121
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 1 DVDNWPPP 8
DVD PPP
Sbjct: 114 DVDASPPP 121
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 4 NWPPPK 9
+W PPK
Sbjct: 226 SWAPPK 231
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 DVDNWPP 7
+VD +PP
Sbjct: 6282 NVDKYPP 6288
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 WPPPK 9
WP PK
Sbjct: 688 WPAPK 692
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 1 DVDNWPPP 8
DVD PPP
Sbjct: 114 DVDASPPP 121
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 2 VDNWPPPK 9
+D W P K
Sbjct: 365 IDKWKPSK 372
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 2 VDNWPPPK 9
+D W P K
Sbjct: 365 IDKWKPSK 372
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 2 VDNWPPPK 9
+D W P K
Sbjct: 365 IDRWKPSK 372
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 2 VDNWPPPK 9
+D W P K
Sbjct: 365 IDRWKPSK 372
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 DVDNWPPP 8
++D PPP
Sbjct: 1343 EIDIMPPP 1350
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 4 NWPPPK 9
+W PPK
Sbjct: 1075 DWTPPK 1080
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 4 NWPPPK 9
+W PPK
Sbjct: 1076 DWTPPK 1081
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 6 PPPKW 10
PPP+W
Sbjct: 978 PPPEW 982
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DVDNWPPPKW 10
D + W P+W
Sbjct: 522 DREQWERPRW 531
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 DVDNWPPPK 9
D D+ PPK
Sbjct: 1581 DADSSTPPK 1589
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 DVDNWPPPK 9
D D+ PPK
Sbjct: 1582 DADSSTPPK 1590
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 DVDNWPPPK 9
D D+ PPK
Sbjct: 1582 DADSSTPPK 1590
>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)
Query: 1 DVDNWPPPKW 10
D DN P+W
Sbjct: 146 DYDNSFMPEW 155
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 DVDNWPPPKW 10
D DN P+W
Sbjct: 146 DYDNSFMPEW 155
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DVDNWPPPKW 10
D + W P+W
Sbjct: 521 DREQWERPRW 530
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 DVDNWPPPK 9
D+ W P K
Sbjct: 3200 DISEWQPSK 3208
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 DVDNWPPPK 9
D+ W P K
Sbjct: 3200 DISEWQPSK 3208
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 DVDNWPPPK 9
D+ W P K
Sbjct: 3200 DISEWQPSK 3208
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 DVDNWPPPK 9
D+ W P K
Sbjct: 3200 DISEWQPSK 3208
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 DVDNWPPPK 9
D+ W P K
Sbjct: 3200 DISEWQPSK 3208
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 DVDNWPPPK 9
D+ W P K
Sbjct: 3201 DISEWQPSK 3209
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 DVDNWPPPK 9
D+ W P K
Sbjct: 3200 DISEWQPSK 3208
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 DVDNWPPPK 9
D+ W P K
Sbjct: 3201 DISEWQPSK 3209
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 DVDNWPPPK 9
D+ W P K
Sbjct: 3201 DISEWQPSK 3209
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 DVDNWPPPK 9
D D+ PPK
Sbjct: 250 DADSSTPPK 258
>sp|E1A_ADE02|EARLY E1A protein|Human adenovirus C serotype 2
Query: 3 DNWPPP 8
DN PPP
Sbjct: 30 DNLPPP 35
>sp|PHOSP_PI2HT|PHOSPHOPROTEIN parainfluenza 2 virus (strain
Query: 3 DNWPPPK 9
DN PP K
Sbjct: 84 DNIPPEK 90
>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe
Query: 2 VDNWPP 7
V+N+PP
Sbjct: 137 VENYPP 142
>sp|PHOSP_PI2H|PHOSPHOPROTEIN parainfluenza 2 virus (HPIV-2)
Query: 3 DNWPPPK 9
DN PP K
Sbjct: 84 DNIPPEK 90
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DVDNWPPPKW 10
D + W P+W
Sbjct: 522 DREQWERPRW 531
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 VDNWPPP 8
VD+ PPP
Sbjct: 2989 VDSAPPP 2995
>sp|E1A_ADE05|EARLY E1A protein|Human adenovirus C serotype 5
Query: 3 DNWPPP 8
DN PPP
Sbjct: 30 DNLPPP 35
14|SequenceR|75|66|TDKPPDVDNW
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 TDKPPDVDNW 10
+DKPP NW
Sbjct: 179 SDKPPGFYNW 188
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 TDKPPDVDNW 10
+DKPP NW
Sbjct: 178 SDKPPGFYNW 187
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 TDKPPDVDNW 10
+DKPP NW
Sbjct: 177 SDKPPGFYNW 186
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 TDKPPDVDNW 10
+DKPP NW
Sbjct: 177 SDKPPGFYNW 186
>sp|HEMA_VACCI|PROTEIN OPG185|Vaccinia virus (strain IHD-J) (VACV)
Query: 1 TDKPPDVDNW 10
++KP D+DN+
Sbjct: 151 SEKPEDIDNF 160
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 KPPDVDNW 10
+P DVD W
Sbjct: 174 QPDDVDCW 181
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 TDKPPDVDNW 10
++KPP NW
Sbjct: 179 SEKPPGFYNW 188
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 TDKPPDVDNW 10
++KPP NW
Sbjct: 179 SEKPPGFYNW 188
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 73 NEPEDIDCW 81
>sp|VEGFH_ORFN7|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ7) (OV
Query: 2 DKPPDVDNW 10
D PP ++W
Sbjct: 29 DSPPSTNDW 37
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 KPPDVDNW 10
+P DVD W
Sbjct: 174 EPDDVDCW 181
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 DKPPDVD 8
DKP DVD
Sbjct: 1389 DKPLDVD 1395
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 DKPPDVD 8
DKP DVD
Sbjct: 1389 DKPLDVD 1395
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 DKPPDVD 8
DKP DVD
Sbjct: 1389 DKPLDVD 1395
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 DKPPDVD 8
DKP DVD
Sbjct: 1389 DKPLDVD 1395
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 DKPPDVD 8
DKP DVD
Sbjct: 1389 DKPLDVD 1395
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 173 NEPEDIDCW 181
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 177 EEPDDIDCW 185
>sp|HEMA_VACCT|PROTEIN OPG185|Vaccinia virus (strain Tian Tan)
Query: 1 TDKPPDVDNW 10
++KP D+DN
Sbjct: 151 SEKPEDIDNL 160
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 177 EEPDDIDCW 185
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 177 EEPDDIDCW 185
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 177 EEPDDIDCW 185
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 177 EEPDDIDCW 185
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 177 EEPDDIDCW 185
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 177 EEPDDIDCW 185
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 177 EEPDDIDCW 185
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 177 EEPDDIDCW 185
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 177 EEPDDIDCW 185
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 DKPPDVDNW 10
+ P DVD W
Sbjct: 114 NDPEDVDCW 122
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 173 NEPEDIDCW 181
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 173 NEPEDIDCW 181
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 173 NEPEDIDCW 181
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 173 NEPEDIDCW 181
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 173 NEPEDIDCW 181
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 173 NEPEDIDCW 181
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 173 NEPEDIDCW 181
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 KPPDVDNW 10
+P DVD W
Sbjct: 183 EPDDVDCW 190
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 DKPPDVDNW 10
+ P DVD W
Sbjct: 187 NDPEDVDCW 195
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 KPPDVDNW 10
+P DVD W
Sbjct: 183 EPDDVDCW 190
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 KPPDVDNW 10
+P DVD W
Sbjct: 183 EPDDVDCW 190
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 DKPPDVDNW 10
+ P DVD W
Sbjct: 187 NDPEDVDCW 195
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 DKPPDVDNW 10
+ P DVD W
Sbjct: 164 EDPDDVDCW 172
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 3 KPPDVDN 9
KPPD D+
Sbjct: 12 KPPDSDS 18
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 3 KPPDVDN 9
KPPD D+
Sbjct: 12 KPPDSDS 18
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 3 KPPDVDN 9
KPPD D+
Sbjct: 12 KPPDSDS 18
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 3 KPPDVDN 9
KPPD D+
Sbjct: 12 KPPDSDS 18
>sp|HEMA_MONPV|PROTEIN OPG185|Monkeypox virus (MPXV)
Query: 1 TDKPPDVDN 9
++KP D+DN
Sbjct: 149 SEKPEDIDN 157
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 DKPPDVDNW 10
+ P DVD W
Sbjct: 187 NDPEDVDCW 195
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 DKPPDVDNW 10
+ P DVD W
Sbjct: 187 NDPEDVDCW 195
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 DKPPDVDNW 10
+ P DVD W
Sbjct: 187 NDPEDVDCW 195
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 3 KPPDVDN 9
KPPD D+
Sbjct: 12 KPPDSDS 18
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 DKPPDVDNW 10
+ P DVD W
Sbjct: 187 NDPEDVDCW 195
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 DKPPDVDNW 10
+ P DVD W
Sbjct: 187 NDPEDVDCW 195
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 DKPPDVDNW 10
+ P DVD W
Sbjct: 187 NDPEDVDCW 195
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 KPPDVDNW 10
+P DVD W
Sbjct: 174 EPDDVDCW 181
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 KPPDVDNW 10
+P DVD W
Sbjct: 174 EPDDVDCW 181
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 KPPDVDNW 10
+P DVD W
Sbjct: 174 EPDDVDCW 181
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 2 DKPPDVDNW 10
++ PD D+W
Sbjct: 258 NESPDFDSW 266
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 KPPDVDNW 10
+P D+D W
Sbjct: 180 EPDDIDCW 187
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 DKPPDVD 8
DKP D+D
Sbjct: 1494 DKPVDID 1500
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 TDKPPDVDNW 10
T P D+D W
Sbjct: 177 TMDPEDIDCW 186
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 KPPDVDNW 10
+P D+D W
Sbjct: 173 EPEDIDCW 180
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 KPPDVDNW 10
+P D+D W
Sbjct: 173 EPEDIDCW 180
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 KPPDVDNW 10
+P D+D W
Sbjct: 173 EPEDIDCW 180
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 KPPDVDNW 10
+P D+D W
Sbjct: 173 EPEDIDCW 180
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 KPPDVDNW 10
+P D+D W
Sbjct: 173 EPEDIDCW 180
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 PPDVD 8
PPD+D
Sbjct: 713 PPDLD 717
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 DKPPDVDNW 10
+ P D+D W
Sbjct: 183 NDPEDIDCW 191
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 KPPDVDNW 10
+P D+D W
Sbjct: 174 EPEDIDCW 181
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 DKPPDVDNW 10
+ P D+D W
Sbjct: 183 NDPEDIDCW 191
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 DKPPDVDNW 10
+ P D+D W
Sbjct: 181 NDPEDIDCW 189
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 KPPDVDNW 10
+P D+D W
Sbjct: 181 EPEDIDCW 188
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 KPPDVDNW 10
+P D+D W
Sbjct: 174 EPEDIDCW 181
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 DKPPDVDNW 10
+ P D+D W
Sbjct: 183 NDPEDIDCW 191
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 KPPDVDNW 10
+P D+D W
Sbjct: 174 EPEDIDCW 181
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 4 PPDVD 8
PPD+D
Sbjct: 713 PPDLD 717
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 PPDVD 8
PPD+D
Sbjct: 713 PPDLD 717
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 1 TDKPPDVD 8
T PPD D
Sbjct: 469 TGTPPDTD 476
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 DKPPDVDNW 10
+ P D+D W
Sbjct: 185 NDPEDIDCW 193
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 KPPDVDNW 10
+P D+D W
Sbjct: 174 EPEDIDCW 181
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 KPPDVDNW 10
+P D+D W
Sbjct: 174 EPEDIDCW 181
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 DKPPDVDNW 10
+ P D+D W
Sbjct: 186 NDPEDIDCW 194
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 DKPPDVDNW 10
D P VD W
Sbjct: 316 DNKPSVDIW 324
Query: 2 DKPPDVDNW 10
++P D+D W
Sbjct: 173 EEPDDLDCW 181
>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33
Query: 1 TDKPPDVDNW 10
TD P +++W
Sbjct: 24 TDLPSQIEHW 33
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 PPDVDNW 10
P D+D W
Sbjct: 180 PEDIDCW 186
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 KPPDVDNW 10
+P D+D W
Sbjct: 186 EPNDIDCW 193
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 TDKPPDVD 8
TD P D+D
Sbjct: 469 TDTPLDID 476
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 PPDVDNW 10
PP +DN+
Sbjct: 1713 PPTIDNF 1719
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 TDKPPDVD 8
TD P D+D
Sbjct: 469 TDTPLDID 476
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 PPDVDNW 10
PP +D W
Sbjct: 2301 PPLLDRW 2307
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 PPDVDNW 10
PP +D W
Sbjct: 2301 PPLLDRW 2307
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 PPDVDNW 10
PP V++W
Sbjct: 2295 PPLVESW 2301
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 4 PPDVDNW 10
PP V+ W
Sbjct: 2295 PPVVETW 2301
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 PPDVDNW 10
PP V++W
Sbjct: 2295 PPLVESW 2301
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 1 TDKPPDVDN 9
T PP VDN
Sbjct: 432 TALPPPVDN 440
15|SequenceR|80|71|INKVITDKPP
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 NKVITDKP 9
NK+ITD P
Sbjct: 709 NKLITDSP 716
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 KVITDKP 9
KV+TDKP
Sbjct: 922 KVLTDKP 928
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 2 NKVITDKP 9
NK+ITD P
Sbjct: 708 NKLITDSP 715
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 NKVITDKP 9
N V+TDKP
Sbjct: 922 NGVLTDKP 929
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 NKVITDKP 9
NK+ITD P
Sbjct: 708 NKLITDSP 715
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 NKVITDKP 9
NK++TD P
Sbjct: 708 NKLVTDSP 715
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 KVITDKPP 10
KVI +PP
Sbjct: 436 KVIDSRPP 443
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 4 VITDKP 9
V+TDKP
Sbjct: 923 VLTDKP 928
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 INKVITDK 8
IN+++T+K
Sbjct: 1368 INRILTEK 1375
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 INKVITDK 8
IN+++T+K
Sbjct: 1368 INRILTEK 1375
16|SequenceR|85|76|GFNLTINKVI
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 3 NLTINKVI 10
NLTINK++
Sbjct: 419 NLTINKLL 426
>sp|UL08_HCMVA|MEMBRANE protein UL8|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FNLTIN 7
FNLT+N
Sbjct: 104 FNLTLN 109
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FNLTINK 8
+NLT+N+
Sbjct: 135 YNLTVNE 141
>sp|UL07_HCMVM|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FNLTIN 7
FNLT+N
Sbjct: 104 FNLTLN 109
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FNLTINKVI 10
+N T +KVI
Sbjct: 446 YNFTFDKVI 454
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 2 FNLTINKVI 10
+N T +KVI
Sbjct: 446 YNFTFDKVI 454
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 2 FNLTINKVI 10
+N T +KVI
Sbjct: 446 YNFTFDKVI 454
17|SequenceR|90|81|APHQPGFNLT
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 APHQPGFN 8
A H PG+N
Sbjct: 1393 ATHDPGYN 1400
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 APHQPGFN 8
A H PG+N
Sbjct: 1394 ATHDPGYN 1401
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 PHQPGFNL 9
PH+ G NL
Sbjct: 325 PHEKGINL 332
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 HQPGFNLT 10
H P FNL+
Sbjct: 524 HDPEFNLS 531
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 HQPGFNLT 10
H P FNL+
Sbjct: 524 HDPEFNLS 531
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 HQPGFNLT 10
H P FNL+
Sbjct: 524 HDPEFNLS 531
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 2 PHQPGFNL 9
P QPGF +
Sbjct: 477 PSQPGFTI 484
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 PHQPG 6
PH+PG
Sbjct: 1439 PHKPG 1443
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 2 PHQPGFN 8
P PGFN
Sbjct: 365 PSMPGFN 371
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 5 PGFNLT 10
PGF+LT
Sbjct: 563 PGFSLT 568
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 4 QPGFNLT 10
QP F+LT
Sbjct: 568 QPAFSLT 574
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 4 QPGFNLT 10
QPG NLT
Sbjct: 212 QPGANLT 218
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 318 PHEKGIN 324
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 321 PHEKGIN 327
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 318 PHEKGIN 324
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 302 PHEKGIN 308
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHEKGIN 331
>sp|SHDAG_HDVTW|SMALL delta antigen|Hepatitis delta virus genotype II
Query: 2 PHQPGF 7
PH+ GF
Sbjct: 89 PHKSGF 94
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 PHQPG 6
PH PG
Sbjct: 1795 PHNPG 1799
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 PHQPGFNL 9
PH P F++
Sbjct: 220 PHAPAFHV 227
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHKKGIN 331
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 PHQPGF 7
PH P F
Sbjct: 1661 PHTPAF 1666
>sp|UL110_HCMVA|UNCHARACTERIZED protein UL110|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PHQPGFN 8
PH+ G+N
Sbjct: 12 PHRTGYN 18
>sp|NSP3_ROTB2|NON-STRUCTURAL protein 3|Rotavirus X (isolate
Query: 5 PGFNLT 10
PG NLT
Sbjct: 247 PGHNLT 252
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 PHQPGF 7
PH P F
Sbjct: 1661 PHTPAF 1666
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 1 APHQPGFNLT 10
P GFN+T
Sbjct: 128 VPSSSGFNVT 137
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHERGIN 331
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHERGIN 331
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHERGIN 331
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 2 PHQPGFN 8
PH+ G N
Sbjct: 325 PHERGIN 331
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 APHQPG 6
APH PG
Sbjct: 331 APHGPG 336
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 3 HQPGFNL 9
HQPG +
Sbjct: 444 HQPGLTI 450
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 PHQPGFNLT 10
P QP N+T
Sbjct: 925 PGQPTLNIT 933
>sp|SHDAG_HDVS1|SMALL delta antigen|Hepatitis delta virus genotype II
Query: 2 PHQPGF 7
PH+ GF
Sbjct: 89 PHKSGF 94
>sp|SHDAG_HDV83|SMALL delta antigen|Hepatitis delta virus genotype II
Query: 2 PHQPGF 7
PH+ GF
Sbjct: 89 PHKSGF 94
>sp|LHDAG_HDVTW|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 2 PHQPGF 7
PH+ GF
Sbjct: 89 PHKSGF 94
>sp|SHDAG_HDVS2|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 PHQPGF 7
PH+ GF
Sbjct: 89 PHKSGF 94
18|SequenceR|95|86|LVGHAAPHQP
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 VGHAAPHQP 10
+GH A QP
Sbjct: 2258 LGHIATQQP 2266
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 LVGHAAPHQP 10
L+G AA H P
Sbjct: 1632 LLGEAALHGP 1641
>sp|PG140_VARV|VIRION membrane protein OPG140|Variola virus
Query: 4 HAAPHQ 9
H APH+
Sbjct: 70 HCAPHR 75
>sp|PG140_VAR67|VIRION membrane protein OPG140|Variola virus (isolate
Query: 4 HAAPHQ 9
H APH+
Sbjct: 70 HCAPHR 75
>sp|PG140_VACCC|VIRION membrane protein OPG140|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 HAAPHQ 9
H APH+
Sbjct: 70 HCAPHR 75
>sp|PG140_MONPV|VIRION membrane protein OPG140|Monkeypox virus (MPXV)
Query: 4 HAAPHQ 9
H APH+
Sbjct: 70 HCAPHR 75
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LVGHAAPHQP 10
L H A H+P
Sbjct: 216 LCNHIAVHRP 225
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LVGHAAPHQP 10
L H A H+P
Sbjct: 216 LCNHIAVHRP 225
>sp|J1S_HCMVA|UNCHARACTERIZED protein J1S|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 HAAPHQ 9
HAAPH+
Sbjct: 6 HAAPHR 11
>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 GHAAPH 8
GH PH
Sbjct: 102 GHPVPH 107
>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 HAAPHQ 9
HAAPH+
Sbjct: 123 HAAPHR 128
19|SequenceR|100|91|EMVLRLVGHA
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 EMVLRLVGHA 10
E+VLR VG++
Sbjct: 1981 ELVLREVGYS 1990
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 EMVLRLVGHA 10
E+VLR +G++
Sbjct: 1981 ELVLREIGYS 1990
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 EMVLRLVGHA 10
E+VLR +G++
Sbjct: 1981 ELVLREIGYS 1990
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 EMVLRLVGHA 10
E+VLR +G++
Sbjct: 1981 EVVLREIGYS 1990
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 EMVLRLVGHA 10
E+VLR +G++
Sbjct: 1981 EVVLREIGYS 1990
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 LRLVGH 9
LRL GH
Sbjct: 324 LRLAGH 329
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 4 LRLVGH 9
LRL GH
Sbjct: 324 LRLAGH 329
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 LRLVGH 9
LRL GH
Sbjct: 324 LRLAGH 329
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 4 LRLVGH 9
LRL GH
Sbjct: 324 LRLAGH 329
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 LRLVGH 9
LRL GH
Sbjct: 324 LRLAGH 329
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 4 LRLVGH 9
LRL GH
Sbjct: 324 LRLAGH 329
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 LRLVGH 9
LRL GH
Sbjct: 324 LRLAGH 329
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 4 LRLVGH 9
LRL GH
Sbjct: 324 LRLAGH 329
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 4 LRLVGH 9
LRL GH
Sbjct: 326 LRLAGH 331
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 4 LRLVGH 9
LRL GH
Sbjct: 326 LRLAGH 331
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 LRLVGH 9
+RL+GH
Sbjct: 207 IRLIGH 212
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LRLVGH 9
+RL+GH
Sbjct: 207 IRLIGH 212
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LRLVGH 9
+RL+GH
Sbjct: 207 IRLIGH 212
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 3 VLRLVGHA 10
VLR GHA
Sbjct: 48 VLRQEGHA 55
20|SequenceR|105|96|MEGSLEMVLR
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GSLEMV 8
GSLEMV
Sbjct: 2 GSLEMV 7
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GSLEMV 8
GSLEMV
Sbjct: 2 GSLEMV 7
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GSLEMV 8
GSLEMV
Sbjct: 2 GSLEMV 7
21|SequenceR|110|101|DCKRVMEGSL
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 CKRVMEGSL 10
CK+ MEG +
Sbjct: 401 CKKNMEGKI 409
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CKRVMEGSL 10
CK+ MEG +
Sbjct: 401 CKKNMEGKI 409
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CKRVMEGSL 10
CK+ MEG +
Sbjct: 401 CKKNMEGKI 409
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CKRVMEGSL 10
CK+ MEG++
Sbjct: 401 CKKNMEGNI 409
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CKRVMEGSL 10
CK+ MEG +
Sbjct: 121 CKKNMEGKI 129
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CKRVMEGSL 10
CK+ MEG +
Sbjct: 401 CKKNMEGKV 409
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CKRVMEGSL 10
CK+ MEG +
Sbjct: 401 CKKNMEGKV 409
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CKRVMEGSL 10
CK+ MEG +
Sbjct: 401 CKKNMEGKV 409
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CKRVMEGSL 10
CK+ MEG +
Sbjct: 301 CKKNMEGKV 309
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 CKRVMEGSL 10
CK+ MEG
Sbjct: 121 CKKNMEGKF 129
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 CKRVMEGSL 10
C++ MEG +
Sbjct: 121 CQKNMEGKI 129
22|SequenceR|115|106|LGIHPDCKRV
>sp|M1_I30A0|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 LGIHPDC 7
+GIHP C
Sbjct: 219 IGIHPSC 225
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LGIHPDCK 8
+GI PDC+
Sbjct: 1956 IGIDPDCQ 1963
Query: 1 LGIHP 5
LG+HP
Sbjct: 1873 LGVHP 1877
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LGIHPDCK 8
LG HPD K
Sbjct: 363 LGAHPDAK 370
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LGIHPDCKR 9
G+HPD ++
Sbjct: 351 FGVHPDTRQ 359
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK++
Sbjct: 329 NPDCKQI 335
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK++
Sbjct: 326 NPDCKQI 332
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK++
Sbjct: 326 NPDCKQI 332
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK++
Sbjct: 326 NPDCKQI 332
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK++
Sbjct: 326 NPDCKQI 332
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK++
Sbjct: 329 NPDCKQI 335
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 HPDC 7
HPDC
Sbjct: 4358 HPDC 4361
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 3 IHPDCK 8
+HP CK
Sbjct: 31 LHPSCK 36
>sp|US16_HCMVM|PROTEIN US16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 HPDCKR 9
HP C+R
Sbjct: 118 HPRCRR 123
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 2 GIHPDCK 8
G H DCK
Sbjct: 927 GSHSDCK 933
>sp|US16_HCMVA|UNCHARACTERIZED protein HVLF2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 HPDCKR 9
HP C+R
Sbjct: 118 HPRCRR 123
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK++
Sbjct: 329 NPDCKQL 335
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 323 NPDCKSI 329
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK++
Sbjct: 329 NPDCKQL 335
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 328 NPDCKLV 334
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 327 NPDCKLV 333
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 329 NPDCKLV 335
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 329 NPDCKLV 335
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 GIHPDCK 8
G HP CK
Sbjct: 794 GQHPKCK 800
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 329 NPDCKLV 335
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 330 NPDCKLV 336
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 324 NPDCKLV 330
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 329 NPDCKLV 335
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 324 NPDCKLV 330
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 329 NPDCKLV 335
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LGIHP 5
LGIHP
Sbjct: 1871 LGIHP 1875
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LGIHP 5
LGIHP
Sbjct: 1873 LGIHP 1877
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 328 NPDCKTI 334
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 323 NPDCKTI 329
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 324 NPDCKTI 330
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 323 NPDCKTI 329
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 330 NPDCKTI 336
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 333 NPDCKTI 339
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 325 NPDCKTI 331
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 329 NPDCKTI 335
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 326 NPDCKTI 332
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 323 NPDCKTI 329
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 323 NPDCKTI 329
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 325 NPDCKTI 331
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 328 NPDCKTI 334
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 324 NPDCKTI 330
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 330 NPDCKTI 336
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 329 NPDCKTI 335
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 323 NPDCKTI 329
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 333 NPDCKTI 339
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 324 NPDCKLV 330
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 323 NPDCKTI 329
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 323 NPDCKSI 329
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 GIHPDCK 8
G HP CK
Sbjct: 353 GSHPMCK 359
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 329 NPDCKLV 335
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 323 NPDCKTI 329
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 326 NPDCKTI 332
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 323 NPDCKTI 329
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 325 NPDCKTI 331
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 327 NPDCKTI 333
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPDCKRV 10
+PDCK +
Sbjct: 325 NPDCKTI 331
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 LGIHPDCKR 9
++PDC++
Sbjct: 275 FAVYPDCEK 283
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 327 NPDCKLV 333
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 324 NPDCKLV 330
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 324 NPDCKLV 330
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 328 NPDCKLV 334
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 329 NPDCKLV 335
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 329 NPDCKLV 335
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 329 NPDCKLV 335
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 329 NPDCKLV 335
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 324 NPDCKLV 330
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LGIHP 5
LG+HP
Sbjct: 1873 LGVHP 1877
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LGIHP 5
LG+HP
Sbjct: 1874 LGVHP 1878
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LGIHP 5
LG+HP
Sbjct: 1873 LGVHP 1877
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LGIHP 5
LG+HP
Sbjct: 1707 LGVHP 1711
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LGIHP 5
LG+HP
Sbjct: 1873 LGVHP 1877
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LGIHP 5
LG+HP
Sbjct: 1873 LGVHP 1877
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 4 HPDC 7
HPDC
Sbjct: 206 HPDC 209
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 329 NPDCKLV 335
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 329 NPDCKLV 335
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 HPDCKRV 10
+PDCK V
Sbjct: 330 NPDCKLV 336
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 1 LGIHPDCK 8
+ + PDCK
Sbjct: 177 VALRPDCK 184
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 5 PDCKR 9
PDC R
Sbjct: 710 PDCSR 714
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 5 PDCK 8
PDCK
Sbjct: 1421 PDCK 1424
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 5 PDCK 8
PDCK
Sbjct: 1418 PDCK 1421
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 1 LGIHPDCK 8
+ + PDCK
Sbjct: 178 VALRPDCK 185
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 5 PDCKR 9
PDC R
Sbjct: 710 PDCSR 714
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 5 PDCKR 9
PDC R
Sbjct: 710 PDCSR 714
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 5 PDCKR 9
PDC R
Sbjct: 705 PDCSR 709
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 3 IHPDCK 8
I+P CK
Sbjct: 14 IYPSCK 19
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 5 PDCKRV 10
PDC +V
Sbjct: 332 PDCSKV 337
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LGIHP 5
LG+HP
Sbjct: 1874 LGLHP 1878
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 4 HPDCK 8
H DCK
Sbjct: 361 HADCK 365
>sp|ORF57_VZVO|UNCHARACTERIZED protein 57|Varicella-zoster virus (strain Oka vaccine)
Query: 4 HPDCK 8
HP CK
Sbjct: 63 HPTCK 67
>sp|ORF57_VZVD|UNCHARACTERIZED protein 57|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 HPDCK 8
HP CK
Sbjct: 63 HPTCK 67
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 5 PDCKRV 10
PDC R+
Sbjct: 822 PDCSRL 827
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 5 PDCKRV 10
PDC R+
Sbjct: 822 PDCSRL 827
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 5 PDCKRV 10
PDC R+
Sbjct: 822 PDCSRL 827
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 5 PDCKRV 10
PDC R+
Sbjct: 822 PDCSRL 827
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 5 PDCKRV 10
PDC R+
Sbjct: 822 PDCSRL 827
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 5 PDCKRV 10
PDC R+
Sbjct: 822 PDCSRL 827
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 5 PDCKRV 10
PDC R+
Sbjct: 822 PDCSRL 827
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 5 PDCKRV 10
PDC R+
Sbjct: 822 PDCSRL 827
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 PDCKRV 10
P CKRV
Sbjct: 327 PVCKRV 332
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 5 PDCKRV 10
PDC R+
Sbjct: 822 PDCSRL 827
>sp|VC14_VACCC|PROTEIN C14|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LGIHPDCKR 9
LG+ +CK+
Sbjct: 4 LGVSIECKK 12
>sp|PG209_MONPV|PROTEIN OPG209|Monkeypox virus (MPXV)
Query: 1 LGIHPDCKR 9
LG+ +CK+
Sbjct: 114 LGVSIECKK 122
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 GIHPDCKRV 10
G HPD + +
Sbjct: 2220 GAHPDAELI 2228
>sp|UL21A_HCMVM|UNCHARACTERIZED protein UL21A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 IHPDCKRV 10
IHP+ +RV
Sbjct: 49 IHPEQRRV 56
>sp|UL21A_HCMVA|UNCHARACTERIZED protein UL21A|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 IHPDCKRV 10
IHP+ +RV
Sbjct: 49 IHPEQRRV 56
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GIHPDCKRV 10
G+H C R+
Sbjct: 508 GLHTTCLRL 516
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 2 GIHPDCKRV 10
G+H C R+
Sbjct: 508 GLHTTCLRL 516
23|SequenceR|120|111|TGRHLLGIHP
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 GRHLLGIHP 10
GRHL+ HP
Sbjct: 1389 GRHLIFCHP 1397
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 LLGIHP 10
LLGIHP
Sbjct: 1870 LLGIHP 1875
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 LLGIHP 10
LLGIHP
Sbjct: 1872 LLGIHP 1877
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 TGRHLLG 7
TG HLLG
Sbjct: 2131 TGEHLLG 2137
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 LLGIHP 10
LLG+HP
Sbjct: 1872 LLGVHP 1877
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 LLGIHP 10
LLG+HP
Sbjct: 1872 LLGVHP 1877
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 LLGIHP 10
LLG+HP
Sbjct: 1872 LLGVHP 1877
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 LLGIHP 10
LLG+HP
Sbjct: 1706 LLGVHP 1711
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 LLGIHP 10
LLG+HP
Sbjct: 1872 LLGVHP 1877
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 LLGIHP 10
LLG+HP
Sbjct: 1872 LLGVHP 1877
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 TGRHLLGIH 9
T RHL+ +H
Sbjct: 1290 TQRHLVAVH 1298
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 HLLGIHP 10
H+L +HP
Sbjct: 576 HILALHP 582
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 3 RHLLGIHP 10
+ L+G+HP
Sbjct: 164 KSLVGMHP 171
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 RHLLGIHP 10
RH IHP
Sbjct: 2079 RHTFLIHP 2086
>sp|UL09_HCMVM|MEMBRANE glycoprotein UL9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GRHLLGIHP 10
G H + +HP
Sbjct: 37 GSHNISLHP 45
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 TGRHLLGIHP 10
TG+ L+G P
Sbjct: 1752 TGKFLIGNQP 1761
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 GRHLLG 7
RHLLG
Sbjct: 460 ARHLLG 465
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 GRHLLG 7
RHLLG
Sbjct: 460 ARHLLG 465
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 GRHLLG 7
RHLLG
Sbjct: 460 ARHLLG 465
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 2 GRHLLGIHP 10
GR +LG+ P
Sbjct: 12 GRQVLGLLP 20
>sp|ORF23_TTVV6|PROBABLE protein VP2|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 4 HLLGIHP 10
HL IHP
Sbjct: 37 HLNSIHP 43
24|SequenceR|125|116|EILKETGRHL
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 5 ETGRHL 10
E GRHL
Sbjct: 130 EVGRHL 135
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 5 ETGRHL 10
E GRHL
Sbjct: 190 EVGRHL 195
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LKETGRHL 10
L+ETG H+
Sbjct: 403 LEETGNHI 410
>sp|GJ_HHV2H|ENVELOPE glycoprotein J|Human herpesvirus 2 (strain HG52)
Query: 1 EILKETGRHL 10
E+L+ GR L
Sbjct: 71 EVLRRLGREL 80
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EILKETGRH 9
+ILK+TG +
Sbjct: 502 QILKDTGNN 510
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 EILKETGRHL 10
E+L E +HL
Sbjct: 37 EVLSEARQHL 46
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EILKETGRHL 10
E+L E +HL
Sbjct: 37 EVLSEARQHL 46
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 LKETGR 8
+KETGR
Sbjct: 539 IKETGR 544
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 LKETGR 8
+KETGR
Sbjct: 539 IKETGR 544
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 LKETGR 8
+KETGR
Sbjct: 539 IKETGR 544
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 EILKETGRHL 10
E+L +TGR +
Sbjct: 1606 ELLLDTGRRI 1615
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 EILKETGRHL 10
+ILK+ G H+
Sbjct: 81 KILKDAGYHV 90
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 1 EILKETGRH 9
+ILK+TG +
Sbjct: 502 KILKDTGNN 510
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 EILKETGRHL 10
+ILK+ G H+
Sbjct: 81 KILKDAGYHV 90
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EILKETG 7
E+L ETG
Sbjct: 383 ELLNETG 389
25|SequenceR|130|121|LYTKYEILKE
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 340 SRYEVIKE 347
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 340 SRYEVIKE 347
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 339 SRYEVIKE 346
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 4 KYEILKE 10
KY+I+KE
Sbjct: 570 KYDIIKE 576
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 4 KYEILKE 10
KY+I+KE
Sbjct: 570 KYDIIKE 576
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 339 SRYEVIKE 346
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 339 SRYEVIKE 346
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 339 SRYEVIKE 346
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 339 SRYEVIKE 346
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 339 SRYEVIKE 346
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 339 SRYEVIKE 346
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 339 SRYEVIKE 346
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 339 SRYEVIKE 346
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 339 SRYEVIKE 346
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 339 SRYEVIKE 346
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 340 SRYEVIKE 347
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 TKYEILKE 10
++YE++KE
Sbjct: 339 SRYEVIKE 346
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 LYTKYEILKE 10
LY+ YE+L E
Sbjct: 637 LYSGYELLIE 646
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 LYTKYEILKE 10
LY+ YE+L E
Sbjct: 637 LYSGYELLIE 646
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 LYTKYEILKE 10
LY+ YE+L E
Sbjct: 637 LYSGYELLIE 646
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 KYEILKE 10
+YE++KE
Sbjct: 340 RYEVIKE 346
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 LYTKYEILKE 10
LY YE+ KE
Sbjct: 495 LYNLYEMKKE 504
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 1 LYTKYEIL 8
+YT+Y I
Sbjct: 233 IYTRYNIF 240
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 2 YTKYEILKE 10
+T YE L+E
Sbjct: 112 FTNYEELRE 120
26|SequenceR|135|126|YPLAQLYTKY
>sp|VE4_HPV29|PROTEIN E4|Human papillomavirus 29
Query: 1 YPLAQLY 7
YPL LY
Sbjct: 10 YPLLDLY 16
>sp|PORTL_HHV7J|PORTAL protein|Human herpesvirus 7 (strain JI)
Query: 2 PLAQLYTK 9
PLA LY++
Sbjct: 270 PLAHLYSE 277
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 PLAQLYTKY 10
P AQL KY
Sbjct: 1131 PQAQLKVKY 1139
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 PLAQLYTKY 10
P AQL KY
Sbjct: 1124 PQAQLKVKY 1132
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 YPLAQLYTKY 10
+PLA L+T +
Sbjct: 917 WPLAWLHTPH 926
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 PLAQLYTKY 10
P AQL KY
Sbjct: 1131 PQAQLKVKY 1139
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PLAQLYTKY 10
P+A + +KY
Sbjct: 1787 PMAMMLSKY 1795
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PLAQLYTKY 10
P+A + +KY
Sbjct: 1787 PMAMMLSKY 1795
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PLAQLYTKY 10
P+A + +KY
Sbjct: 1621 PMAMMLSKY 1629
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 PLAQLYTKY 10
P AQL KY
Sbjct: 1127 PQAQLKVKY 1135
27|SequenceR|140|131|DLRDFYPLAQ
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 RDFYPLA 9
+D YPLA
Sbjct: 488 KDLYPLA 494
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 3 RDFYPL 8
+DFYP+
Sbjct: 544 KDFYPI 549
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 DLRDFYP 7
D DFYP
Sbjct: 2428 DTTDFYP 2434
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 DLRDFYP 7
D DFYP
Sbjct: 2428 DTTDFYP 2434
>sp|PG195_VACCC|PROTEIN OPG195|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 RDFYP 7
+DFYP
Sbjct: 41 KDFYP 45
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 3 RDFYP 7
+DFYP
Sbjct: 41 KDFYP 45
>sp|NCAP_BUNYW|NUCLEOPROTEIN virus (BUNV)
Query: 5 FYPLA 9
FYPLA
Sbjct: 157 FYPLA 161
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 1 DLRDFY 6
+LRDFY
Sbjct: 59 ELRDFY 64
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 LRDFYPL 8
LRD +PL
Sbjct: 94 LRDHFPL 100
>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related coronavirus
Query: 3 RDFYPLA 9
RDF P+A
Sbjct: 109 RDFSPIA 115
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 1 DLRDFY 6
DL+DFY
Sbjct: 59 DLQDFY 64
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 DLRDF 5
DLRDF
Sbjct: 1013 DLRDF 1017
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 1 DLRDFYPL 8
LRD +PL
Sbjct: 90 SLRDHFPL 97
28|SequenceR|145|136|MMSVYDLRDF
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 YDLRDF 10
YD RDF
Sbjct: 1538 YDFRDF 1543
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 YDLRDF 10
YD RDF
Sbjct: 1538 YDFRDF 1543
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 MSVYDLRD 9
M VYD R+
Sbjct: 1236 MGVYDFRN 1243
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 5 YDLRDF 10
YDLRD
Sbjct: 664 YDLRDL 669
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 5 YDLRDF 10
YDLRD
Sbjct: 663 YDLRDL 668
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 5 YDLRDF 10
YDLRD
Sbjct: 663 YDLRDL 668
>sp|VP6_ROTJ1|INTERMEDIATE capsid protein VP6|Rotavirus X (strain
Query: 4 VYDLRD 9
VY+LRD
Sbjct: 48 VYNLRD 53
>sp|VP6_ROTB2|INTERMEDIATE capsid protein VP6|Rotavirus X (isolate
Query: 4 VYDLRD 9
VY+LRD
Sbjct: 48 VYNLRD 53
29|SequenceR|150|141|AQENCMMSVY
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 404 SQEDCMI 410
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 399 SQEDCMI 405
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 69 SQEDCMI 75
>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 69 SQEDCMI 75
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 398 SQEDCMI 404
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 397 SQEDCMI 403
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMV 411
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMV 411
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 1 AQENCMM 7
+QE+CM+
Sbjct: 405 SQEDCMI 411
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 4 NCMMSVY 10
+C MSVY
Sbjct: 1157 SCAMSVY 1163
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 4 NCMMSVY 10
+C MSVY
Sbjct: 1157 SCAMSVY 1163
>sp|GL_VZVD|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 ENCMMSVY 10
E C+ SVY
Sbjct: 46 EPCVSSVY 53
>sp|GL_VZVO|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Oka vaccine)
Query: 3 ENCMMSVY 10
E C+ SVY
Sbjct: 47 EPCVSSVY 54
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 AQENCMMSVY 10
A+EN ++VY
Sbjct: 26 ARENLWVTVY 35
30|SequenceR|155|146|VALSYAQENC
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LSYAQENC 10
L YAQ NC
Sbjct: 219 LRYAQRNC 226
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LSYAQENC 10
L YAQ NC
Sbjct: 213 LRYAQRNC 220
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VALSYAQENC 10
VAL+ + ENC
Sbjct: 638 VALNISLENC 647
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 YAQENC 10
YAQ++C
Sbjct: 82 YAQQDC 87
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 YAQENC 10
YAQ++C
Sbjct: 82 YAQQDC 87
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 VALSYAQEN 9
VAL+ AQ+N
Sbjct: 538 VALAAAQDN 546
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 VALSYAQEN 9
VAL+ AQ+N
Sbjct: 538 VALAAAQDN 546
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 2 ALSYAQENC 10
AL +AQ+ C
Sbjct: 68 ALLHAQQTC 76
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 LSYAQEN 9
LSY Q+N
Sbjct: 164 LSYEQQN 170
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 LSYAQEN 9
LSY Q+N
Sbjct: 164 LSYEQQN 170
31|SequenceR|160|151|NLLKEVALSY
>sp|M1_I30A0|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I02A1|MATRIX protein 1|Influenza A virus (strain A/Guinea
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 106 KEVALSY 112
>sp|M1_I82A7|MATRIX protein 1|Influenza A virus (strain A/Swine/Hong
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I85A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I18A0|MATRIX protein 1|Influenza A virus (strain A/Brevig
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I80A2|MATRIX protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I61A1|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I54A1|MATRIX protein 1|Influenza A virus (strain A/Swine/May/1954
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I01A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I01A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I81A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I77AC|MATRIX protein 1|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I59A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I97A1|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I97A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I02A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I78A3|MATRIX protein 1|Influenza A virus (strain A/Mallard/New
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I02A5|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I88A7|MATRIX protein 1|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I88A5|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I67A2|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I37A0|MATRIX protein 1|Influenza A virus (strain A/Swine/29/1937
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I02A4|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I02A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I02A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I00A0|MATRIX protein 1|Influenza A virus (strain A/Duck/Hong
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I96A0|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I78A7|MATRIX protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I02A7|MATRIX protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 111 KEVALSY 117
>sp|M1_I05A1|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I03A0|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I02A6|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I01A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I03A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I01A0|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I000F|MATRIX protein 1|Influenza A virus (strain A/Chicken/Weybridge
Query: 4 KEVALSY 10
KEVALSY
Sbjct: 113 KEVALSY 119
>sp|M1_I68A0|MATRIX protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I67A0|MATRIX protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I35A3|MATRIX protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I89A2|MATRIX protein 1|Influenza A virus (strain A/Beijing/353/1989
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I68A6|MATRIX protein 1|Influenza A virus (strain A/Northern
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I57A5|MATRIX protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I50A0|MATRIX protein 1|Influenza A virus (strain A/Fort
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I45A0|MATRIX protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I33A0|MATRIX protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 110 KEIALSY 116
>sp|M1_I71A1|MATRIX protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I88A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/8/1988
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I83A8|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I80A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I69A0|MATRIX protein 1|Influenza A virus (strain A/England/878/1969
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I68A4|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I51A0|MATRIX protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I78A8|MATRIX protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I76A6|MATRIX protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I75A0|MATRIX protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I73A5|MATRIX protein 1|Influenza A virus (strain A/Port
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I72A8|MATRIX protein 1|Influenza A virus (strain A/Udorn/1972
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I72A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I72A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I72A2|MATRIX protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I70A0|MATRIX protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I57A1|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I77A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I57A3|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I57A2|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I79A0|MATRIX protein 1|Influenza A virus (strain A/Bangkok/1/1979
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann
Query: 4 KEVALSY 10
KE+ALSY
Sbjct: 113 KEIALSY 119
>sp|M1_I000X|MATRIX protein 1|Influenza A virus (strain A/X-31
Query: 4 KEVALSY 10
KE++LSY
Sbjct: 113 KEISLSY 119
>sp|M1_I56A3|MATRIX protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 4 KEVALSY 10
KEVAL Y
Sbjct: 113 KEVALGY 119
>sp|M1_I36A0|MATRIX protein 1|Influenza A virus (strain A/Henry/1936
Query: 4 KEVALSY 10
KE++LSY
Sbjct: 113 KEISLSY 119
>sp|M1_I34A1|MATRIX protein 1|Influenza A virus (strain A/Puerto
Query: 4 KEVALSY 10
KE++LSY
Sbjct: 113 KEISLSY 119
>sp|M1_I06A0|MATRIX protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 4 KEVALSY 10
KE++LSY
Sbjct: 113 KEISLSY 119
>sp|M1_I57A0|MATRIX protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 4 KEVALSY 10
KE+AL Y
Sbjct: 113 KEIALGY 119
32|SequenceR|165|156|PPPRINLLKE
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 2 PPRINLLKE 10
P R+ LLKE
Sbjct: 590 PSRVELLKE 598
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 PPRINLLKE 10
P R+ LLKE
Sbjct: 590 PSRVELLKE 598
>sp|PG043_MONPV|MONOGLYCERIDE lipase homolog|Monkeypox virus (MPXV)
Query: 3 PRINLL 8
PR+NLL
Sbjct: 139 PRLNLL 144
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 5 INLLKE 10
INLLKE
Sbjct: 523 INLLKE 528
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 4 RINLLKE 10
RIN LKE
Sbjct: 2769 RINRLKE 2775
>sp|Y14_SARS|UNCHARACTERIZED protein 14|Severe acute respiratory syndrome coronavirus
Query: 2 PPRINLLKE 10
PP N LKE
Sbjct: 3 PPCYNFLKE 11
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 PPRINLLKE 10
PP LLK+
Sbjct: 595 PPNYKLLKD 603
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 2 PPRINLLKE 10
PP LLK+
Sbjct: 595 PPNYKLLKD 603
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PPRINLLKE 10
PP LLK+
Sbjct: 595 PPNYKLLKD 603
>sp|GLYC_HRSV1|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 1 PPPRINLLKE 10
PP R+N K+
Sbjct: 95 PPERVNSSKQ 104
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 2 PPRINLLKE 10
PP LLK+
Sbjct: 595 PPNYKLLKD 603
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 2 PPRINLLKE 10
PP LLK+
Sbjct: 595 PPNYKLLKD 603
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 2 PPRINLLKE 10
PP LLK+
Sbjct: 595 PPNYKLLKD 603
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 PRINLLK 9
P IN+LK
Sbjct: 73 PNINILK 79
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 3 PRINLLK 9
P IN+LK
Sbjct: 73 PNINILK 79
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PRINLLK 9
P IN+LK
Sbjct: 73 PNINILK 79
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 3 PRINLLK 9
P IN+LK
Sbjct: 73 PNINILK 79
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 3 PRINLLK 9
P IN+LK
Sbjct: 73 PNINILK 79
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 3 PRINLLK 9
P IN+LK
Sbjct: 73 PNINILK 79
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 3 PRINLLK 9
P IN+LK
Sbjct: 73 PNINILK 79
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 3 PRINLLK 9
P IN+LK
Sbjct: 73 PNINILK 79
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 3 PRINLLKE 10
P++N+LK+
Sbjct: 173 PKVNILKQ 180
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 3 PRINLLKE 10
P++N+LK+
Sbjct: 173 PKVNILKQ 180
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 4 RINLLKE 10
++NLLKE
Sbjct: 1031 QVNLLKE 1037
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 PPRINLLKE 10
PP+++ +KE
Sbjct: 1939 PPKLDEIKE 1947
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 PPRINLLKE 10
PP+++ +KE
Sbjct: 1940 PPKLDEIKE 1948
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 RINLLKE 10
++NLLKE
Sbjct: 1023 QVNLLKE 1029
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 4 RINLLKE 10
++NLLKE
Sbjct: 1023 QVNLLKE 1029
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 RINLLKE 10
++NLLKE
Sbjct: 1043 QVNLLKE 1049
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 RINLLKE 10
++NLLKE
Sbjct: 1024 QVNLLKE 1030
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 RINLLKE 10
++NLLKE
Sbjct: 1034 QVNLLKE 1040
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 4 RINLLKE 10
++NLLKE
Sbjct: 1033 QVNLLKE 1039
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 4 RINLLKE 10
++NLLKE
Sbjct: 1024 QVNLLKE 1030
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 4 RINLLKE 10
++NLLKE
Sbjct: 1027 QVNLLKE 1033
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 4 RINLLKE 10
++NLLKE
Sbjct: 1033 QVNLLKE 1039
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 4 RINLLKE 10
++NLLKE
Sbjct: 1035 QVNLLKE 1041
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 4 RINLLKE 10
++NLLKE
Sbjct: 1025 QVNLLKE 1031
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 4 RINLLKE 10
++NLLKE
Sbjct: 1025 QVNLLKE 1031
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 4 RINLLKE 10
++NLLKE
Sbjct: 1041 QVNLLKE 1047
33|SequenceR|170|161|IWQARPPPRI
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 WQARPPPRI 10
WQ PPP +
Sbjct: 2133 WQLSPPPGV 2141
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 WQARPPPRI 10
WQ PPP +
Sbjct: 2133 WQLSPPPGV 2141
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 ARPPP 8
ARPPP
Sbjct: 6046 ARPPP 6050
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 3 QARPPPR 9
Q PPPR
Sbjct: 588 QKYPPPR 594
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 QARPPPR 9
Q PPPR
Sbjct: 588 QKYPPPR 594
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 QARPPPR 9
Q PPPR
Sbjct: 589 QKYPPPR 595
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 QARPPPR 9
Q PPPR
Sbjct: 589 QKYPPPR 595
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 3 QARPPPR 9
Q PPPR
Sbjct: 589 QKYPPPR 595
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 6 PPPRI 10
PPPRI
Sbjct: 1447 PPPRI 1451
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 WQARPPPR 9
W+ PP R
Sbjct: 30 WRPSPPTR 37
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IWQARPPP 8
+W+ R PP
Sbjct: 285 LWEGRDPP 292
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 ARPPP 8
A+PPP
Sbjct: 6063 AKPPP 6067
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 ARPPP 8
A+PPP
Sbjct: 6040 AKPPP 6044
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 IWQARPP 7
+W RPP
Sbjct: 847 VWCPRPP 853
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 IWQARPP 7
+W RPP
Sbjct: 847 VWCPRPP 853
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IWQARPPP 8
+W+ R PP
Sbjct: 291 LWEGRDPP 298
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 IWQARPP 7
+W RPP
Sbjct: 845 VWCPRPP 851
Query: 3 QARPPP 8
+ RPPP
Sbjct: 1466 KTRPPP 1471
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 IWQARPP 7
+W RPP
Sbjct: 845 VWCPRPP 851
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 IWQARPP 7
+W RPP
Sbjct: 846 VWCPRPP 852
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 WQARPPPR 9
W++ PP +
Sbjct: 30 WRSSPPTK 37
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 IWQARPP 7
+W RPP
Sbjct: 846 VWCPRPP 852
>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 IWQARPPP 8
I +ARPPP
Sbjct: 56 IPRARPPP 63
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 3 QARPPP 8
A+PPP
Sbjct: 239 HAKPPP 244
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 3 QARPPP 8
A+PPP
Sbjct: 239 HAKPPP 244
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 IWQARPPPRI 10
+W R PR+
Sbjct: 2276 LWSEREEPRV 2285
>sp|RPMS1_EBVB9|UNCHARACTERIZED protein RPMS1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 IWQARPPP 8
+ ARPPP
Sbjct: 17 AYSARPPP 24
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 WQARPPP 8
W ARP P
Sbjct: 998 WLARPLP 1004
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 WQARPPP 8
W ARP P
Sbjct: 998 WLARPLP 1004
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 WQARPPP 8
W ARP P
Sbjct: 998 WLARPLP 1004
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 WQARPPP 8
W ARP P
Sbjct: 998 WLARPLP 1004
>sp|CAP8_ADE12|PRE-HEXON-LINKING protein VIII|Human adenovirus A serotype 12
Query: 1 IWQARPPP 8
I+Q PPP
Sbjct: 79 IYQENPPP 86
>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12
Query: 3 QARPPPR 9
Q RP PR
Sbjct: 7 QMRPQPR 13
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 PPPRI 10
PPPR+
Sbjct: 354 PPPRV 358
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 PPPRI 10
PPPR+
Sbjct: 354 PPPRV 358
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 6 PPPRI 10
PPPR+
Sbjct: 1767 PPPRL 1771
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 4 ARPPP 8
+RPPP
Sbjct: 48 SRPPP 52
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 4 ARPPP 8
+RPPP
Sbjct: 48 SRPPP 52
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 3 QARPPP 8
+A+PPP
Sbjct: 130 KAQPPP 135
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 1 IWQARPPP 8
W A PPP
Sbjct: 431 TWSAGPPP 438
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 IWQARPPPRI 10
+W PP I
Sbjct: 192 LWGVHHPPNI 201
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 IWQARPPPRI 10
+W PP I
Sbjct: 192 LWGVHHPPNI 201
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 1 IWQARPPPRI 10
+W PP I
Sbjct: 192 LWGVHHPPNI 201
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 1 IWQARPPP 8
W A PPP
Sbjct: 431 TWSAGPPP 438
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 6 PPPRI 10
PPPR+
Sbjct: 1770 PPPRL 1774
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 WQARPPP 8
W ARP P
Sbjct: 1003 WLARPLP 1009
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 WQARPPP 8
W ARP P
Sbjct: 1003 WLARPLP 1009
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 IWQARPPPR 9
IW PPP+
Sbjct: 104 IWVRGPPPQ 112
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 3 QARPPPRI 10
+AR PP I
Sbjct: 318 EARDPPMI 325
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 3 QARPPPR 9
Q+RP PR
Sbjct: 1172 QSRPNPR 1178
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 IWQARPPPR 9
+W R PR
Sbjct: 2276 LWSEREEPR 2284
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 IWQARPPPR 9
+W R PR
Sbjct: 2276 LWSEREEPR 2284
34|SequenceR|175|166|GFLVRIWQAR
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 FLVRIWQA 9
FL+ WQA
Sbjct: 224 FLIAFWQA 231
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 FLVRIWQAR 10
FLV W+A+
Sbjct: 2622 FLVNAWKAK 2630
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 FLVRIWQA 9
F+V+ W+A
Sbjct: 2136 FMVKTWEA 2143
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 FLVRIWQAR 10
FLV+ W+++
Sbjct: 2623 FLVQAWKSK 2631
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 FLVRIWQAR 10
FLV+ W+++
Sbjct: 2623 FLVQAWKSK 2631
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 FLVRIWQAR 10
FLV+ W+++
Sbjct: 2623 FLVQAWKSK 2631
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 RIWQAR 10
++WQAR
Sbjct: 145 QMWQAR 150
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 RIWQAR 10
++WQAR
Sbjct: 155 QMWQAR 160
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 RIWQAR 10
++WQAR
Sbjct: 155 QMWQAR 160
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 FLVRIWQAR 10
FL+R W+ +
Sbjct: 2645 FLLRAWKEK 2653
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 FLVRIWQAR 10
FLV W+++
Sbjct: 2622 FLVNTWKSK 2630
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 FLVRIWQAR 10
FLV W+++
Sbjct: 2622 FLVNTWKSK 2630
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 FLVRIWQAR 10
FLV W+++
Sbjct: 2622 FLVNTWKSK 2630
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GFLVRIWQ 8
GFL IW+
Sbjct: 724 GFLALIWE 731
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 IWQAR 10
IWQAR
Sbjct: 391 IWQAR 395
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 IWQAR 10
IWQAR
Sbjct: 391 IWQAR 395
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 GFLVRIWQA 9
GF+VRI A
Sbjct: 115 GFVVRIGAA 123
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GFLVRIWQ 8
GFL IW+
Sbjct: 750 GFLALIWE 757
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 FLVRIWQAR 10
FLV W+++
Sbjct: 2622 FLVNAWKSK 2630
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 FLVRIWQAR 10
FLV W+++
Sbjct: 2622 FLVNAWKSK 2630
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 FLVRIWQAR 10
FLV W+++
Sbjct: 2622 FLVNAWKSK 2630
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 FLVRIWQAR 10
FL++ W+++
Sbjct: 2626 FLLKTWRSK 2634
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 FLVRIWQAR 10
FL++ W+++
Sbjct: 2626 FLLKAWKSK 2634
>sp|UL68_HCMVA|UNCHARACTERIZED protein UL68|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GFLVRI 6
GFLVRI
Sbjct: 58 GFLVRI 63
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 GFLVRIWQA 9
FLV WQA
Sbjct: 2388 AFLVPGWQA 2396
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 FLVRIWQAR 10
FL++ W+++
Sbjct: 2623 FLLKAWKSK 2631
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 3 LVRIWQAR 10
+VR+W +
Sbjct: 160 IVRVWDVK 167
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 LVRIWQ 8
+VR+WQ
Sbjct: 408 IVRMWQ 413
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 LVRIWQ 8
+VR+WQ
Sbjct: 411 IVRMWQ 416
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 GFLVRIWQA 9
G+L+ WQA
Sbjct: 2397 GYLLPGWQA 2405
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 LVRIWQ 8
+VR+WQ
Sbjct: 414 IVRMWQ 419
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GFLVRIW 7
GFL IW
Sbjct: 760 GFLTLIW 766
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 GFLVRIWQA 9
G+++ WQA
Sbjct: 2387 GYMIPGWQA 2395
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GFLVRIW 7
GFL IW
Sbjct: 743 GFLALIW 749
35|SequenceR|180|171|LRTIEGFLVR
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 3 TIEGFLV 9
TI+GFL+
Sbjct: 477 TIQGFLL 483
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 LRTIEGFLV 9
+ +EGFLV
Sbjct: 429 ISALEGFLV 437
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RTIEGF 7
RT++GF
Sbjct: 124 RTVDGF 129
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RTIEGF 7
RT++GF
Sbjct: 124 RTVDGF 129
36|SequenceR|185|176|MIHNLLRTIE
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 3 HNLLRTIE 10
HN+LRT E
Sbjct: 219 HNILRTQE 226
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 3 HNLLRTIE 10
HN+LRT E
Sbjct: 219 HNILRTQE 226
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 HNLLRTI 9
HN+L+T+
Sbjct: 4991 HNMLKTV 4997
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 HNLLRTI 9
HN+L+T+
Sbjct: 4968 HNMLKTV 4974
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 IHNLLRTIE 10
++NL +TIE
Sbjct: 462 VNNLFKTIE 470
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 IHNLLRTIE 10
I+NL TIE
Sbjct: 426 INNLFGTIE 434
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 2 IHNLLRTIE 10
I+NL TIE
Sbjct: 426 INNLFGTIE 434
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 5 LLRTIE 10
LLRTIE
Sbjct: 208 LLRTIE 213
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 NLLRTIE 10
NLL+T+E
Sbjct: 347 NLLKTLE 353
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 NLLRTIE 10
NLL+T+E
Sbjct: 347 NLLKTLE 353
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 2 IHNLLR 7
+HNL+R
Sbjct: 324 LHNLIR 329
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 MIHNLLR 7
++HN+LR
Sbjct: 604 VLHNVLR 610
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 3 HNLLRT 8
H+LLRT
Sbjct: 653 HHLLRT 658
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 3 HNLLRT 8
H+LLRT
Sbjct: 653 HHLLRT 658
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 NLLRTIE 10
NLL T+E
Sbjct: 49 NLLETVE 55
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 NLLRTIE 10
NLL T+E
Sbjct: 49 NLLETVE 55
>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 HNLLRTIE 10
+NL+RT E
Sbjct: 36 YNLIRTYE 43
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 1 MIHNLLRTIE 10
M HN T+E
Sbjct: 595 MAHNTASTLE 604
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 1 MIHNLLRTIE 10
M HN T+E
Sbjct: 593 MAHNTASTLE 602
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 1 MIHNLLRTIE 10
M HN T+E
Sbjct: 610 MAHNTASTLE 619
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 1 MIHNLLRTIE 10
M HN T+E
Sbjct: 589 MAHNTASTLE 598
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 1 MIHNLLRTIE 10
M HN T+E
Sbjct: 613 MAHNTASTLE 622
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 MIHNLLRTIE 10
M HN T+E
Sbjct: 607 MAHNTASTLE 616
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 MIHNLLRTIE 10
M HN T+E
Sbjct: 622 MAHNTASTLE 631
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 MIHNLLRTIE 10
M HN T+E
Sbjct: 614 MAHNTASTLE 623
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 MIHNLLRTIE 10
M HN T+E
Sbjct: 638 MAHNTASTLE 647
37|SequenceR|190|181|HTTVAMIHNL
>sp|UL138_HCMVM|PROTEIN UL138|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TTVAMIH 8
TTVAM+H
Sbjct: 157 TTVAMVH 163
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 3 TVAMIHN 9
TVA++HN
Sbjct: 165 TVAIVHN 171
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 HTTVAMIHNL 10
H T +++H+L
Sbjct: 1091 HFTSSLLHSL 1100
38|SequenceR|195|186|GLDLAHTTVA
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 GLDLAHTTV 9
LDL+HT V
Sbjct: 1263 ALDLSHTRV 1271
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 GLDLAHTTV 9
LDL+HT V
Sbjct: 1263 ALDLSHTRV 1271
>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)
Query: 2 LDLAHTTVA 10
+DL H+TV+
Sbjct: 161 IDLDHSTVS 169
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 2 LDLAHTTVA 10
+DL H+TV+
Sbjct: 181 IDLDHSTVS 189
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 2 LDLAHTTVA 10
+DL H+TV+
Sbjct: 186 IDLDHSTVS 194
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 GLDLAHTTV 9
GLD AH V
Sbjct: 472 GLDAAHFNV 480
>sp|PG121_VAR67|MRNA-DECAPPING protein OPG121|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 DLAHTTV 9
DL+HT++
Sbjct: 173 DLSHTSI 179
>sp|PG121_VACCC|MRNA-DECAPPING protein OPG121|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DLAHTTV 9
DL+HT++
Sbjct: 173 DLSHTSI 179
>sp|PG121_MONPV|MRNA-DECAPPING protein OPG121|Monkeypox virus (MPXV)
Query: 3 DLAHTTV 9
DL+HT++
Sbjct: 173 DLSHTSI 179
>sp|D9_VARV|MRNA-DECAPPING protein D9|Variola virus
Query: 3 DLAHTTV 9
DL+HT++
Sbjct: 173 DLSHTSI 179
>sp|VPAP_HHV7J|DNA polymerase processivity factor|Human herpesvirus 7 (strain JI)
Query: 2 LDLAHTTV 9
+DL H+TV
Sbjct: 160 IDLDHSTV 167
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 LAHTTVA 10
+AHTTV+
Sbjct: 312 VAHTTVS 318
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 1 GLDLAHTT 8
G+DL H T
Sbjct: 469 GIDLEHYT 476
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 DLAHTTV 9
D+AHT +
Sbjct: 1177 DMAHTLI 1183
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 DLAHTTV 9
D+AHT +
Sbjct: 1177 DMAHTLI 1183
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 DLAHTTV 9
D+AHT +
Sbjct: 1177 DMAHTLI 1183
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 DLAHTTV 9
D+AHT +
Sbjct: 1177 DMAHTLI 1183
39|SequenceR|200|191|FPTMAGLDLA
>sp|YVCA_VACCC|UNCHARACTERIZED 8.0 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FPTMAG 6
FPTM+G
Sbjct: 7 FPTMSG 12
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 PTMAGLD 8
P M+GLD
Sbjct: 410 PEMSGLD 416
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 FPTMAGLDLA 10
P+M+ LDL+
Sbjct: 2959 LPSMSQLDLS 2968
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 PTMAGLDLA 10
P M GLD+
Sbjct: 2064 PNMEGLDMG 2072
>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31
Query: 2 PTMAGLDLA 10
PT +G D+A
Sbjct: 127 PTTSGFDIA 135
>sp|E4RF3_ADE02|EARLY 4 ORF3 protein|Human adenovirus C serotype 2
Query: 3 TMAGLDL 9
TMAGL++
Sbjct: 18 TMAGLNI 24
>sp|E411_ADE05|PROBABLE early E4 11 kDa|Human adenovirus C serotype 5
Query: 3 TMAGLDL 9
TMAGL++
Sbjct: 18 TMAGLNI 24
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 PTMAGLDL 9
PT+ G DL
Sbjct: 1192 PTVTGADL 1199
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 PTMAGLDLA 10
PT GLD+
Sbjct: 453 PTSYGLDIG 461
>sp|VL2_HPV67|MINOR capsid protein L2|Human papillomavirus 67
Query: 2 PTMAGLDLA 10
PT +G D+A
Sbjct: 124 PTASGFDVA 132
40|SequenceR|205|196|EFLWFFPTMA
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 FLWFFPTMA 10
F+W +PT A
Sbjct: 902 FVWLYPTKA 910
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 2 FLWFFPTMA 10
F+W +PT A
Sbjct: 902 FVWLYPTKA 910
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 FLWFFPTMA 10
F W +PT A
Sbjct: 903 FTWLYPTKA 911
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 4 WFFP 7
WFFP
Sbjct: 389 WFFP 392
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 EFLWFFPT 8
E W FPT
Sbjct: 700 EVNWVFPT 707
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 1 EFLWF 5
EF+WF
Sbjct: 266 EFVWF 270
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 1 EFLWF 5
EF+WF
Sbjct: 267 EFVWF 271
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 1 EFLWF 5
EF+WF
Sbjct: 267 EFVWF 271
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 EFLWFFPTMA 10
++ W F TMA
Sbjct: 98 DWTWIFLTMA 107
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 WFFPTMA 10
W++PT A
Sbjct: 83 WYYPTEA 89
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 LWFFPTMA 10
LW FP A
Sbjct: 615 LWHFPCTA 622
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 EFLWFFP 7
+FL FFP
Sbjct: 1039 DFLSFFP 1045
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 FLWFF 6
F WFF
Sbjct: 3153 FYWFF 3157
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 EFLWFFP 7
+FL FFP
Sbjct: 1039 DFLSFFP 1045
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 FLWFFPTM 9
F W PT+
Sbjct: 473 FPWLLPTV 480
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 FLWFF 6
F WFF
Sbjct: 3153 FYWFF 3157
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 EFLWFFP 7
+FL FFP
Sbjct: 1039 DFLSFFP 1045
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EFLWFFPTM 9
EFL + P+M
Sbjct: 3368 EFLDYMPSM 3376
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EFLWFFPTM 9
EFL + P+M
Sbjct: 3368 EFLDYMPSM 3376
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EFLWFFPTM 9
EFL + P+M
Sbjct: 3368 EFLDYMPSM 3376
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EFLWFFPTM 9
EFL + P+M
Sbjct: 3368 EFLDYMPSM 3376
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EFLWFFPTM 9
EFL + P+M
Sbjct: 3368 EFLDYMPSM 3376
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate
Query: 3 LWFFPTM 9
+WF P +
Sbjct: 12 MWFIPNV 18
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 1 EFLWF 5
EF+WF
Sbjct: 298 EFVWF 302
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 FLWFFP 7
F WF P
Sbjct: 1479 FHWFIP 1484
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 EFLWFFP 7
+FL FFP
Sbjct: 1039 DFLNFFP 1045
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 4 WFFPTMA 10
W+FP +
Sbjct: 169 WYFPGLG 175
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 EFLWFFP 7
+FL FFP
Sbjct: 1039 QFLDFFP 1045
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 LWFFP 7
LWF P
Sbjct: 668 LWFHP 672
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 LWFFP 7
LWF P
Sbjct: 668 LWFHP 672
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 LWFFP 7
LWF P
Sbjct: 668 LWFHP 672
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 WFFPT 8
WF PT
Sbjct: 1354 WFSPT 1358
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 WFFPT 8
WF PT
Sbjct: 1354 WFSPT 1358
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 WFFPT 8
WF PT
Sbjct: 1354 WFSPT 1358
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 WFFPT 8
WF PT
Sbjct: 1354 WFSPT 1358
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 4 WFFPT 8
WF PT
Sbjct: 1282 WFSPT 1286
41|SequenceR|210|201|MKEREEFLWF
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 KEREEFL 8
K+REEFL
Sbjct: 546 KDREEFL 552
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 MKEREEFLWF 10
+KE +E WF
Sbjct: 2773 LKEEQESTWF 2782
>sp|E1A_ADE12|EARLY E1A protein|Human adenovirus A serotype 12
Query: 2 KEREEF 7
+EREEF
Sbjct: 142 REREEF 147
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 EEFLW 9
EEF+W
Sbjct: 138 EEFIW 142
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 EEFLW 9
EEF+W
Sbjct: 138 EEFIW 142
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 EEFLW 9
EEF+W
Sbjct: 138 EEFIW 142
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 MKEREEFL 8
+KEREE L
Sbjct: 296 IKEREECL 303
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 3 EREEFLW 9
ERE +W
Sbjct: 95 ERERLVW 101
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 MKEREEFL 8
+KE+ EFL
Sbjct: 1149 VKEKHEFL 1156
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 MKEREEFL 8
+KE+ EFL
Sbjct: 1148 VKEKHEFL 1155
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 MKEREEFL 8
+KE+ EFL
Sbjct: 1148 VKEKHEFL 1155
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 MKEREEFL 8
+KE+ EFL
Sbjct: 1158 VKEKHEFL 1165
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 MKEREEFL 8
+KE+ EFL
Sbjct: 1151 VKEKHEFL 1158
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 MKEREEFL 8
+KE+ EFL
Sbjct: 1139 VKEKHEFL 1146
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 MKEREEFL 8
+KE+ EFL
Sbjct: 1139 VKEKHEFL 1146
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 MKEREEFL 8
+KE+ EFL
Sbjct: 1140 VKEKHEFL 1147
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 MKEREEFL 8
+KE+ EFL
Sbjct: 1138 VKEKHEFL 1145
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 MKEREEFL 8
+KE+ EFL
Sbjct: 1138 VKEKHEFL 1145
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 MKEREEFL 8
+KE+ EFL
Sbjct: 1142 VKEKHEFL 1149
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 MKEREEFL 8
+KE+ EFL
Sbjct: 1137 VKEKHEFL 1144
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 KEREEFL 8
K+REEF+
Sbjct: 551 KDREEFV 557
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 KEREEFL 8
K+REEF+
Sbjct: 551 KDREEFV 557
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 1 MKEREEFLWF 10
+++R+EFL+
Sbjct: 222 IRDRKEFLYL 231
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 KEREEFL 8
K+REE+L
Sbjct: 542 KDREEYL 548
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 MKEREE 6
+KEREE
Sbjct: 1124 LKEREE 1129
42|SequenceR|215|206|EYFEFMKERE
>sp|E413_ADE12|PROBABLE early E4 13 kDa|Human adenovirus A serotype 12
Query: 2 YFEFMKERE 10
YF F+ ER+
Sbjct: 59 YFAFLTERQ 67
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 YFEFMKER 9
YF F +ER
Sbjct: 199 YFHFYQER 206
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 YFEFMKER 9
YF F +ER
Sbjct: 199 YFHFYQER 206
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 YFEFMKER 9
YF F +ER
Sbjct: 199 YFHFYQER 206
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 EYFEFMKE 8
EY+EF+ +
Sbjct: 5109 EYYEFLNK 5116
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 EYFEFM 6
EY+EF+
Sbjct: 5147 EYYEFL 5152
Query: 1 EYFEFMKER 9
+++EF+K +
Sbjct: 4821 DFYEFVKSK 4829
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 EYFEFM 6
EY+EF+
Sbjct: 5167 EYYEFL 5172
Query: 1 EYFEFMKER 9
+++EF+K +
Sbjct: 4841 DFYEFVKSK 4849
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 EYFEFM 6
EY+EF+
Sbjct: 5197 EYYEFL 5202
Query: 1 EYFEFMKER 9
+++EF+K +
Sbjct: 4871 DFYEFVKSK 4879
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 EYFEFMK 7
+YF+F+K
Sbjct: 1732 DYFKFLK 1738
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 2 YFEFMKE 8
YFE MK+
Sbjct: 870 YFEHMKK 876
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 2 YFEFMKE 8
YFE MK+
Sbjct: 870 YFEHMKK 876
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 2 YFEFMKE 8
YFE MK+
Sbjct: 871 YFEHMKK 877
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 2 YFEFMKE 8
YFE MK+
Sbjct: 871 YFEHMKK 877
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 2 YFEFMKE 8
YF FM++
Sbjct: 782 YFSFMQD 788
43|SequenceR|220|211|AGSVREYFEF
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 REYFEF 10
REYF+F
Sbjct: 946 REYFQF 951
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 5 REYFEF 10
REYF+F
Sbjct: 946 REYFQF 951
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 GSVREYF 8
G+V+EYF
Sbjct: 819 GAVKEYF 825
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 GSVREYFEF 10
GS+ E FEF
Sbjct: 485 GSLPELFEF 493
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 GSVREYFEF 10
GS+ E FEF
Sbjct: 485 GSLPELFEF 493
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 2 GSVREYFEF 10
GS+ E FEF
Sbjct: 485 GSLPELFEF 493
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 VREYFEF 10
V EY+EF
Sbjct: 5165 VNEYYEF 5171
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 VREYFEF 10
V EY+EF
Sbjct: 5195 VNEYYEF 5201
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 VREYFEF 10
V EY+EF
Sbjct: 5145 VNEYYEF 5151
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 VREYFEF 10
V EY+EF
Sbjct: 5107 VTEYYEF 5113
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 4 VREYFEF 10
+R YF+F
Sbjct: 1474 IRNYFKF 1480
>sp|M1_DHVI1|MATRIX protein 1|Dhori virus (strain Indian/1313/61) (Dho)
Query: 1 AGSVREY 7
AGS REY
Sbjct: 216 AGSGREY 222
>sp|VP8_VARV|CORE protein VP8|Variola virus
Query: 1 AGSVREY 7
AGS+ EY
Sbjct: 17 AGSISEY 23
>sp|VP8_VAR67|CORE protein VP8|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 AGSVREY 7
AGS+ EY
Sbjct: 17 AGSISEY 23
>sp|VP8_VACCC|CORE protein VP8|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 AGSVREY 7
AGS+ EY
Sbjct: 17 AGSISEY 23
>sp|VP8_MONPV|CORE protein VP8|Monkeypox virus (MPXV)
Query: 1 AGSVREY 7
AGS+ EY
Sbjct: 17 AGSISEY 23
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 GSVREYFE 9
GS+ YFE
Sbjct: 1531 GSLYSYFE 1538
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AGSVREYF 8
AGS+R Y
Sbjct: 699 AGSLRNYL 706
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AGSVREYF 8
AGS+R Y
Sbjct: 699 AGSLRNYL 706
44|SequenceR|225|216|AAHMRAGSVR
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 AHMRAGSVR 10
AH RAG+V+
Sbjct: 34 AHRRAGTVK 42
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 2 AHMRAGSVR 10
AH RAG+V+
Sbjct: 34 AHRRAGTVK 42
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 AAHMRAGSVR 10
A H++ GS+R
Sbjct: 2036 AGHIKNGSMR 2045
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 AAHMRAGSVR 10
A H++ GS+R
Sbjct: 2036 AGHVKNGSMR 2045
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 AAHMRAGSVR 10
A H++ GS+R
Sbjct: 2042 AGHVKNGSMR 2051
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 AHMRAGSVR 10
H+R GS+R
Sbjct: 2045 GHVRNGSMR 2053
45|SequenceR|230|221|GPRIYAAHMR
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 GPRIYAAHMR 10
GP IYA H +
Sbjct: 1505 GPLIYAEHAK 1514
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 GPRIYAAHMR 10
GP IYA H +
Sbjct: 1504 GPLIYAEHSK 1513
>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28
Query: 1 GPRIYA 6
GPR+YA
Sbjct: 224 GPRLYA 229
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 GPRIYAAHM 9
GP Y HM
Sbjct: 697 GPSSYRGHM 705
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 GPRIYAAHM 9
GP Y HM
Sbjct: 697 GPSSYRGHM 705
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 RIYAAHM 9
+IYA HM
Sbjct: 183 KIYAEHM 189
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 GPRIYAA 7
GP+ YAA
Sbjct: 2392 GPKTYAA 2398
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PRIYAAH 8
PR++ AH
Sbjct: 379 PRVWTAH 385
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PRIYAAH 8
PR++ AH
Sbjct: 379 PRVWTAH 385
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PRIYAAH 8
PR++ AH
Sbjct: 379 PRVWTAH 385
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPRIYAAHMR 10
G I+A H++
Sbjct: 553 GTSIFAGHLK 562
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPRIYAAHMR 10
G I+A H++
Sbjct: 553 GTSIFAGHLK 562
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPRIYAAHMR 10
G I+A H++
Sbjct: 553 GTSIFAGHLK 562
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPRIYAAHMR 10
G I+A H++
Sbjct: 553 GTSIFAGHLK 562
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPRIYAAHMR 10
G I+A H++
Sbjct: 553 GTSIFAGHLK 562
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 GPRIYAAH 8
G R+YA H
Sbjct: 126 GCRMYALH 133
46|SequenceR|235|226|DQHVGGPRIY
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related
Query: 2 QHVGGPRIY 10
+H+ GPR+Y
Sbjct: 81 RHLPGPRVY 89
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 QHVGGPRIY 10
+H+ GPR+Y
Sbjct: 81 RHLPGPRVY 89
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 HVGGPRI 9
HVGGP++
Sbjct: 216 HVGGPKL 222
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 DQHVGGPRIY 10
DQ+ GP IY
Sbjct: 291 DQYTLGPHIY 300
>sp|ORF9B_SARS2|ORF9B protein|Severe acute respiratory syndrome coronavirus
Query: 1 DQHVGGPRIY 10
DQ+ GP++Y
Sbjct: 33 DQNNVGPKVY 42
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 2 QHVGGPRIY 10
+ V GPR+Y
Sbjct: 220 RRVAGPRLY 228
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 DQHVGGPRIY 10
DQ+ GP IY
Sbjct: 291 DQNTLGPHIY 300
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 2 QHVGGPRIY 10
+ V GPR+Y
Sbjct: 219 RRVAGPRLY 227
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 2 QHVGGPRIY 10
+ V GPR+Y
Sbjct: 220 RRVAGPRLY 228
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 5 GGPRIY 10
GGP IY
Sbjct: 593 GGPNIY 598
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 5 GGPRIY 10
GGP IY
Sbjct: 593 GGPNIY 598
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 5 GGPRIY 10
GGP IY
Sbjct: 593 GGPNIY 598
>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18
Query: 2 QHVGGPRIY 10
+ V GPR+Y
Sbjct: 219 RRVAGPRLY 227
>sp|VL2_HPV70|MINOR capsid protein L2|Human papillomavirus type 70
Query: 4 VGGPRIY 10
V GPR+Y
Sbjct: 221 VAGPRLY 227
>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39
Query: 4 VGGPRIY 10
V GPR+Y
Sbjct: 221 VAGPRLY 227
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 5 GGPRIY 10
GGPRI+
Sbjct: 497 GGPRIF 502
>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180
Query: 4 VGGPRIY 10
V GPR+Y
Sbjct: 221 VAGPRLY 227
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 4 VGGPRIY 10
V GPR+Y
Sbjct: 222 VAGPRLY 228
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 HVGGPRI 9
HV GP++
Sbjct: 216 HVSGPKL 222
>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3
Query: 4 VGGPRIY 10
+ GPR+Y
Sbjct: 222 IAGPRLY 228
>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28
Query: 4 VGGPRIY 10
+ GPR+Y
Sbjct: 222 IAGPRLY 228
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 4 VGGPRIY 10
+ GPR+Y
Sbjct: 222 IAGPRLY 228
>sp|E411_ADE12|PROBABLE early E4 11 kDa|Human adenovirus A serotype 12
Query: 2 QHVGGPRIY 10
QH GG R +
Sbjct: 94 QHSGGDRCH 102
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 2 QHVGGPRIY 10
+ V GPR+Y
Sbjct: 219 RRVRGPRLY 227
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 VGGPR 8
+GGPR
Sbjct: 3534 IGGPR 3538
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 VGGPR 8
+GGPR
Sbjct: 3534 IGGPR 3538
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 DQHVGG 6
DQ VGG
Sbjct: 1744 DQQVGG 1749
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 DQHVGG 6
DQ VGG
Sbjct: 1744 DQQVGG 1749
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 DQHVGGPR 8
D+H G P+
Sbjct: 79 DKHSGSPQ 86
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 HVGGPR 8
HV GP+
Sbjct: 216 HVSGPK 221
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DQHVGGPR 8
D+H G P+
Sbjct: 79 DKHSGSPQ 86
>sp|REV_HV1U4|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 4 VGGPRI 9
VGGP+I
Sbjct: 104 VGGPQI 109
47|SequenceR|240|231|LGLPLDQHVG
>sp|YHL4_HCMVA|UNCHARACTERIZED protein HHLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GLPLDQHV 9
GLPLD+HV
Sbjct: 91 GLPLDRHV 98
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 LGLPLDQHV 9
LG+P D H+
Sbjct: 614 LGVPNDSHI 622
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 LGLPLD 6
LGLP+D
Sbjct: 1203 LGLPMD 1208
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 LGLPLD 6
LGLP+D
Sbjct: 1203 LGLPMD 1208
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 GLPLDQHV 9
G PLD HV
Sbjct: 89 GSPLDFHV 96
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 GLPLDQHV 9
G PLD HV
Sbjct: 89 GSPLDFHV 96
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 GLPLDQHV 9
G PLD HV
Sbjct: 89 GSPLDFHV 96
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 LGLPLDQHV 9
LG+ LDQ++
Sbjct: 471 LGVALDQYM 479
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 LGLPLDQHV 9
LG+ LDQ++
Sbjct: 471 LGVALDQYM 479
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 LGLPLDQHV 9
LG+ LDQ++
Sbjct: 471 LGVALDQYM 479
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 LPLDQHV 9
LPL QHV
Sbjct: 646 LPLVQHV 652
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LGLPLDQH 8
L LP D+H
Sbjct: 815 LSLPSDRH 822
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LGLPLDQH 8
L LP D+H
Sbjct: 815 LSLPSDRH 822
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 LPLDQHVG 10
+PL Q+VG
Sbjct: 276 VPLHQNVG 283
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 LPLDQHVG 10
+PL Q+VG
Sbjct: 276 VPLHQNVG 283
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PLDQHV 9
PL++HV
Sbjct: 305 PLEEHV 310
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PLDQHV 9
PL++HV
Sbjct: 304 PLEEHV 309
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 1 LGLPLDQH 8
LG+ L QH
Sbjct: 199 LGIALTQH 206
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 1 LGLPLDQH 8
LG+ L QH
Sbjct: 202 LGIKLTQH 209
>sp|CORE5_ADE05|CORE-CAPSID bridging protein|Human adenovirus C serotype 5
Query: 1 LGLPLDQ 7
L LPLD+
Sbjct: 127 LALPLDE 133
>sp|CORE5_ADE02|CORE-CAPSID bridging protein|Human adenovirus C serotype 2
Query: 1 LGLPLDQ 7
L LPLD+
Sbjct: 128 LALPLDE 134
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 PLDQHVG 10
P+D H G
Sbjct: 199 PIDSHKG 205
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PLDQHVG 10
P+D H G
Sbjct: 199 PIDSHKG 205
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 4 PLDQHVG 10
P+D H G
Sbjct: 199 PIDSHKG 205
>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)
Query: 4 PLDQHVG 10
P+D H G
Sbjct: 199 PIDSHKG 205
48|SequenceR|245|236|YIDDMLGLPL
>sp|CORE5_ADE05|CORE-CAPSID bridging protein|Human adenovirus C serotype 5
Query: 4 DMLGLPL 10
DML LPL
Sbjct: 125 DMLALPL 131
>sp|CORE5_ADE02|CORE-CAPSID bridging protein|Human adenovirus C serotype 2
Query: 4 DMLGLPL 10
DML LPL
Sbjct: 126 DMLALPL 132
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 YIDDML 6
Y+DDML
Sbjct: 807 YVDDML 812
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 YIDDML 6
Y+DDML
Sbjct: 807 YVDDML 812
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 DDMLGLPL 10
DD GLPL
Sbjct: 955 DDYQGLPL 962
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 DDMLGLPL 10
DD GLPL
Sbjct: 955 DDYQGLPL 962
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 IDDMLGLP 9
IDD G+P
Sbjct: 2406 IDDAPGMP 2413
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 3 DDMLGL 8
DD+LGL
Sbjct: 960 DDLLGL 965
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 3 DDMLGL 8
DD+LGL
Sbjct: 981 DDLLGL 986
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 DDMLG 7
DDMLG
Sbjct: 2088 DDMLG 2092
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 DDMLGL 8
DD+LGL
Sbjct: 961 DDLLGL 966
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 2 IDDMLGLP 9
+DD GLP
Sbjct: 340 VDDGAGLP 347
Query: 4 DMLGLP 9
D+LG+P
Sbjct: 275 DLLGIP 280
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 DDMLGL 8
DD+LGL
Sbjct: 962 DDLLGL 967
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 YIDDML 6
Y+DD+L
Sbjct: 879 YVDDLL 884
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 YIDDML 6
Y+DD+L
Sbjct: 879 YVDDLL 884
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 YIDDML 6
Y+DD+L
Sbjct: 879 YVDDLL 884
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 IDDMLGLP 9
++D+LG P
Sbjct: 477 LEDVLGYP 484
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 YIDDMLGL 8
+IDD+L +
Sbjct: 337 FIDDLLSI 344
49|SequenceR|250|241|NKSFQYIDDM
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QYIDD+
Sbjct: 769 YQYIDDL 775
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 3 SFQYIDDM 10
+F Y+DDM
Sbjct: 546 AFSYMDDM 553
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 1 NKSFQYIDDM 10
N ++ YIDD+
Sbjct: 254 NTAYSYIDDL 263
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 1 NKSFQYIDDM 10
N ++ YIDD+
Sbjct: 263 NTAYSYIDDL 272
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 769 YQYMDDL 775
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 778 YQYMDDL 784
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 778 YQYMDDL 784
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 768 YQYMDDL 774
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 762 YQYMDDL 768
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 769 YQYMDDL 775
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 761 YQYMDDL 767
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 766 YQYMDDL 772
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 765 YQYMDDL 771
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 765 YQYMDDL 771
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 769 YQYMDDL 775
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 767 YQYMDDL 773
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 765 YQYMDDL 771
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 768 YQYMDDL 774
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 763 YQYMDDL 769
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 774 YQYMDDL 780
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 773 YQYMDDL 779
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 767 YQYMDDL 773
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 768 YQYMDDL 774
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 772 YQYMDDL 778
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 768 YQYMDDL 774
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 772 YQYMDDL 778
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 768 YQYMDDL 774
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 780 YQYMDDL 786
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 768 YQYMDDL 774
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 780 YQYMDDL 786
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 780 YQYMDDL 786
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 770 YQYMDDL 776
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 768 YQYMDDL 774
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 763 YQYMDDL 769
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 763 YQYMDDL 769
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 763 YQYMDDL 769
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 764 YQYMDDL 770
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FQYIDDM 10
+QY+DD+
Sbjct: 768 YQYMDDL 774
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 1 NKSFQYIDDM 10
N ++ YIDD+
Sbjct: 263 NTAYSYIDDL 272
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 4 FQYIDDM 10
QY+DD+
Sbjct: 877 LQYVDDL 883
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 4 FQYIDDM 10
QY+DD+
Sbjct: 877 LQYVDDL 883
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 4 FQYIDDM 10
QY+DD+
Sbjct: 877 LQYVDDL 883
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDL 553
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDL 553
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDL 553
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDL 553
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDL 553
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDL 553
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDL 553
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDL 553
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDL 553
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 NKSFQYIDDM 10
NK QYI D+
Sbjct: 51 NKGKQYISDV 60
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 NKSFQYIDDM 10
NK QYI D+
Sbjct: 51 NKGKQYISDV 60
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 NKSFQYIDDM 10
NK QYI D+
Sbjct: 51 NKGKQYISDV 60
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 545 AFSYMDDV 552
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 545 AFSYMDDV 552
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 545 AFSYMDDV 552
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 545 AFSYMDDV 552
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 545 AFSYMDDV 552
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 545 AFSYMDDV 552
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 535 AFSYMDDV 542
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 535 AFSYMDDV 542
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 535 AFSYMDDV 542
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 535 AFSYMDDV 542
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 535 AFSYMDDV 542
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 535 AFSYMDDV 542
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 535 AFSYMDDV 542
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 541 AFSYMDDV 548
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 546 AFSYMDDV 553
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 548 AFSYMDDV 555
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 548 AFSYMDDV 555
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 548 AFSYMDDV 555
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 541 AFSYMDDV 548
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 548 AFSYMDDV 555
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 548 AFSYMDDV 555
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 548 AFSYMDDV 555
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 SFQYIDDM 10
+F Y+DD+
Sbjct: 541 AFSYMDDV 548
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 QYIDDM 10
QY+DD+
Sbjct: 768 QYMDDL 773
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 NKSFQYIDD 9
NK Q++ D
Sbjct: 643 NKGMQFVSD 651
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 NKSFQYIDD 9
NK Q++ D
Sbjct: 642 NKGMQFVSD 650
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 NKSFQYIDDM 10
NK QY+ D+
Sbjct: 51 NKGKQYVSDV 60
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SFQYIDD 9
+++Y+DD
Sbjct: 38 TYEYLDD 44
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SFQYIDD 9
+++Y+DD
Sbjct: 38 TYEYLDD 44
>sp|U15_HHV6U|UNCHARACTERIZED protein U15|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KSFQYIDDM 10
+ F Y+DD+
Sbjct: 149 RFFSYVDDL 157
>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 3 SFQYIDDM 10
SFQ DDM
Sbjct: 103 SFQIPDDM 110
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 3 SFQYIDDM 10
SFQ DDM
Sbjct: 103 SFQIPDDM 110
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 3 SFQYIDDM 10
SFQ DDM
Sbjct: 103 SFQIPDDM 110
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 3 SFQYIDDM 10
SFQ DDM
Sbjct: 103 SFQIPDDM 110
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 1 NKSFQYIDDM 10
N ++ YIDD+
Sbjct: 79 NFTYDYIDDV 88
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 1 NKSFQYIDDM 10
N ++ YIDD+
Sbjct: 79 NFTYDYIDDV 88
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United
Query: 1 NKSFQYIDDM 10
N ++ YIDD+
Sbjct: 79 NFTYDYIDDV 88
50|SequenceR|255|246|LRLSFNKSFQ
>sp|YL15_ADE41|UNCHARACTERIZED 12.4 kDa protein in|Human adenovirus F serotype 41
Query: 1 LRLSFNK 7
LRL+FNK
Sbjct: 7 LRLAFNK 13
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 3 LSFNKS 8
LSFNKS
Sbjct: 214 LSFNKS 219
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 3 LSFNKS 8
LSFNKS
Sbjct: 214 LSFNKS 219
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 LRLSFNK 7
L+L+FNK
Sbjct: 2815 LKLTFNK 2821
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 LRLSFNK 7
L+L+FNK
Sbjct: 2785 LKLTFNK 2791
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 LRLSFNK 7
L+L+FNK
Sbjct: 2765 LKLTFNK 2771
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LRLSFNK 7
L+L+FNK
Sbjct: 2785 LKLTFNK 2791
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LRLSFNK 7
L+L+FNK
Sbjct: 2815 LKLTFNK 2821
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LRLSFNK 7
L+L+FNK
Sbjct: 2765 LKLTFNK 2771
51|SequenceR|260|251|EELEDLRLSF
>sp|VE6_HPV2A|PROTEIN E6|Human papillomavirus type 2a
Query: 2 ELEDLRL 8
ELEDLRL
Sbjct: 21 ELEDLRL 27
>sp|VE6_HPV27|PROTEIN E6|Human papillomavirus 27
Query: 2 ELEDLRL 8
ELEDLRL
Sbjct: 27 ELEDLRL 33
>sp|VE6_HPV57|PROTEIN E6|Human papillomavirus 57
Query: 2 ELEDLRL 8
ELEDLR+
Sbjct: 21 ELEDLRI 27
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 4 EDLRLSF 10
+DLRL+F
Sbjct: 87 QDLRLAF 93
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 3 LEDLRLSF 10
LED +LSF
Sbjct: 408 LEDWQLSF 415
>sp|VE6_HPV61|PROTEIN E6|Human papillomavirus type 61
Query: 2 ELEDLRLS 9
+ EDLRL+
Sbjct: 19 DFEDLRLT 26
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 3 LEDLRLS 9
EDLRLS
Sbjct: 338 FEDLRLS 344
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 2 ELEDLRLSF 10
+L +LRL+F
Sbjct: 260 DLAELRLAF 268
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 2 ELEDLRLSF 10
+L +LRL+F
Sbjct: 260 DLAELRLAF 268
>sp|VE6_HPV10|PROTEIN E6|Human papillomavirus type 10
Query: 3 LEDLRL 8
LEDLRL
Sbjct: 22 LEDLRL 27
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 EELEDLRLSF 10
E+LE+L+ +F
Sbjct: 1544 EQLEELQEAF 1553
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 EELEDLRLSF 10
E+LE+L+ +F
Sbjct: 1543 EQLEELQEAF 1552
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 EELEDLRLSF 10
E+LE+L+ +F
Sbjct: 1543 EQLEELQEAF 1552
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 1 EELEDLRLSF 10
E+LE+L+ +F
Sbjct: 1543 EQLEELQEAF 1552
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 EELEDLRLSF 10
E+LE+L+ +F
Sbjct: 1541 EQLEELQEAF 1550
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 EELEDLRL 8
EEL D+RL
Sbjct: 2021 EELYDIRL 2028
52|SequenceR|265|256|NNTLLEELED
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 NNTLLEE 7
NNT+LE+
Sbjct: 2068 NNTILED 2074
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 NNTLLEE 7
NNT+LE+
Sbjct: 2067 NNTILED 2073
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 1 NNTLLEE 7
NN+LLE+
Sbjct: 394 NNSLLED 400
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 NNTLLE 6
NNTL+E
Sbjct: 338 NNTLME 343
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 NNTLLEELE 9
NN +EE+E
Sbjct: 170 NNLAIEEIE 178
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 NNTLLEELE 9
NN +EE+E
Sbjct: 170 NNLAIEEIE 178
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 NNTLLE 6
NNT+LE
Sbjct: 2066 NNTILE 2071
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 1 NNTLLEELED 10
+NT+ ++LED
Sbjct: 339 SNTITKQLED 348
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 NNTLLEELED 10
NN +LEE D
Sbjct: 2043 NNQILEENMD 2052
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 NNTLLEELED 10
NN +LEE D
Sbjct: 2043 NNQILEENMD 2052
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 NNTLLEELED 10
NN +LEE D
Sbjct: 2043 NNQILEENMD 2052
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 NNTLLEELED 10
NN +LEE D
Sbjct: 2043 NNQILEENMD 2052
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 NNTLLEE 7
NN +LEE
Sbjct: 2043 NNQILEE 2049
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 NNTLLEE 7
NN +LEE
Sbjct: 2043 NNQILEE 2049
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 NNTLLEE 7
NN +LEE
Sbjct: 2043 NNQILEE 2049
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 NNTLLEE 7
NN +LEE
Sbjct: 2043 NNQILEE 2049
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 NNTLLEE 7
NN +LEE
Sbjct: 2043 NNQILEE 2049
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 NNTLLEELED 10
NN +LEE D
Sbjct: 2043 NNQILEENMD 2052
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NNTLLEE 7
NN +LEE
Sbjct: 1634 NNQILEE 1640
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 NNTLLEELED 10
NN +LEE D
Sbjct: 2045 NNQVLEENMD 2054
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 NNTLLEELED 10
NN +LEE D
Sbjct: 2044 NNQVLEENMD 2053
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NNTLLEE 7
NN +LEE
Sbjct: 2044 NNQILEE 2050
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NNTLLEE 7
NN +LEE
Sbjct: 2044 NNQILEE 2050
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NNTLLEE 7
NN +LEE
Sbjct: 2044 NNQILEE 2050
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NNTLLEE 7
NN +LEE
Sbjct: 2044 NNQILEE 2050
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 NNTLLEELED 10
NN +LEE D
Sbjct: 2045 NNQVLEENMD 2054
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NNTLLEE 7
NN +LEE
Sbjct: 2044 NNQILEE 2050
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 NNTLLEE 7
NN +LEE
Sbjct: 2044 NNQILEE 2050
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NNTLLEE 7
NN +LEE
Sbjct: 2044 NNQILEE 2050
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 NNTLLEELE 9
NN ++EE++
Sbjct: 744 NNKIMEEIK 752
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 NNTLLEELE 9
NN ++EE++
Sbjct: 744 NNKIMEEIK 752
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 1 NNTLLEE 7
N+TLLE+
Sbjct: 392 NSTLLED 398
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 1 NNTLLEE 7
N+TLLE+
Sbjct: 424 NSTLLED 430
53|SequenceR|270|261|NRWIRNNTLL
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 1 NRWIRNNTLL 10
NRW R+NT L
Sbjct: 140 NRWSRSNTDL 149
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 1 NRWIRNN 7
NRW R+N
Sbjct: 139 NRWTRSN 145
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 3 WIRNN 7
WIRNN
Sbjct: 51 WIRNN 55
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 2 RWIRNNTLL 10
RW +N TLL
Sbjct: 234 RWPKNETLL 242
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RWIRNNTLL 10
RW +N TLL
Sbjct: 221 RWPKNETLL 229
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 RWIRNNT 8
+W+RNN+
Sbjct: 305 KWLRNNS 311
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 RWIRNN 7
RW+ NN
Sbjct: 3003 RWVLNN 3008
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 RWIRNN 7
RW+ NN
Sbjct: 2980 RWVLNN 2985
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 RWIRNN 7
RW+ NN
Sbjct: 3003 RWVLNN 3008
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 RWIRNN 7
RW+ NN
Sbjct: 2980 RWVLNN 2985
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 NRWIRNNTLL 10
N W ++N+LL
Sbjct: 126 NWWTKSNSLL 135
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 4 IRNNTL 9
IRNNT+
Sbjct: 1118 IRNNTI 1123
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 RWIRN 6
+W+RN
Sbjct: 273 KWVRN 277
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 WIRNNT 8
W+ NNT
Sbjct: 2662 WLNNNT 2667
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 WIRNNT 8
W+ NNT
Sbjct: 2662 WLNNNT 2667
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 WIRNNT 8
W+ NNT
Sbjct: 2659 WLNNNT 2664
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 WIRNNT 8
W+ NNT
Sbjct: 2662 WLNNNT 2667
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 WIRNNT 8
W+ NNT
Sbjct: 2662 WLNNNT 2667
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 WIRNNT 8
W+ NNT
Sbjct: 2662 WLNNNT 2667
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 WIRNNT 8
W+ NNT
Sbjct: 2662 WLNNNT 2667
54|SequenceR|275|266|IDITRNRWIR
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 DITRNRW 8
++TRNRW
Sbjct: 1079 ELTRNRW 1085
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 DITRNRW 8
++TRNRW
Sbjct: 1079 ELTRNRW 1085
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 DITRNRW 8
++TRNRW
Sbjct: 1079 ELTRNRW 1085
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 DITRNRW 8
++TRNRW
Sbjct: 1079 ELTRNRW 1085
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 3 ITRNRWIR 10
IT+NRW R
Sbjct: 304 ITQNRWGR 311
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 3 ITRNRWIR 10
+T+NRW R
Sbjct: 298 VTQNRWGR 305
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 4 TRNRWIR 10
T+NRWI+
Sbjct: 379 TKNRWIK 385
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 TRNRWIR 10
T+NRWI+
Sbjct: 379 TKNRWIK 385
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 5 RNRWIR 10
RNRW R
Sbjct: 138 RNRWTR 143
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 4 TRNRWIR 10
T+NRWI+
Sbjct: 379 TKNRWIK 385
>sp|UL133_HCMVM|PROTEIN UL133|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IDITRNRWIR 10
ID+ RW+R
Sbjct: 76 IDLLTCRWVR 85
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 IDITRNRWI 9
+D+ + RW+
Sbjct: 28 VDVKKRRWV 36
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 IDITRNRWI 9
+D+ + RW+
Sbjct: 28 VDVKKRRWV 36
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 IDITRNRWI 9
+D+ + RW+
Sbjct: 28 VDVKKRRWV 36
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 5 RNRWIR 10
RNRW R
Sbjct: 435 RNRWSR 440
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 5 RNRWIR 10
RNRW R
Sbjct: 139 RNRWSR 144
>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 IDITRNRWI 9
+D+ + RW+
Sbjct: 28 VDVKKRRWV 36
>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 IDITRNRWI 9
+D+ + RW+
Sbjct: 28 VDVKKRRWV 36
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 3 ITRNRWIR 10
I +NRW R
Sbjct: 319 IVKNRWGR 326
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 3 ITRNRWIR 10
I +NRW R
Sbjct: 319 IVKNRWGR 326
>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 IDITRNRWI 9
+D+ + RW+
Sbjct: 28 VDVKKRRWV 36
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 1 IDITRNRWI 9
+DI N WI
Sbjct: 32 VDIRENPWI 40
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 3 ITRNRWIR 10
+ +NRW R
Sbjct: 266 VVQNRWGR 273
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 3 ITRNRWIR 10
+ +NRW R
Sbjct: 265 VVQNRWGR 272
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 3 ITRNRWIR 10
+ +NRW R
Sbjct: 274 VAQNRWGR 281
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 IDITRNRW 8
I +TR++W
Sbjct: 1024 ITLTRSQW 1031
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 IDITRNRW 8
I +TR++W
Sbjct: 1024 ITLTRSQW 1031
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 IDITRNRW 8
I +TR++W
Sbjct: 1024 ITLTRSQW 1031
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 DITRNRWIR 10
++ R+RW R
Sbjct: 1148 EVMRSRWSR 1156
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 DITRNRWIR 10
++ R+RW R
Sbjct: 1148 EVMRSRWSR 1156
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 DITRNRWIR 10
++ R+RW R
Sbjct: 1147 EVMRSRWSR 1155
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 ITRNRW 8
+TR+RW
Sbjct: 1239 LTRSRW 1244
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 IDITRNRW 8
ID+T +W
Sbjct: 1026 IDLTTEQW 1033
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 IDITRNRW 8
ID+T +W
Sbjct: 1026 IDMTTEQW 1033
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 IDITRNRW 8
ID+T +W
Sbjct: 1026 IDMTTEQW 1033
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 IDITRNRW 8
ID+T +W
Sbjct: 1026 IDMTTEQW 1033
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 DITRNRW 8
++T++RW
Sbjct: 1079 ELTKSRW 1085
>sp|VE6_HPV49|PROTEIN E6|Human papillomavirus type 49
Query: 5 RNRW 8
RNRW
Sbjct: 124 RNRW 127
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 ITRNRWI 9
+ +NRW+
Sbjct: 125 VRKNRWL 131
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 ITRNRWI 9
+ +NRW+
Sbjct: 125 VRKNRWL 131
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 ITRNRWI 9
+ +NRW+
Sbjct: 125 VRKNRWL 131
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 ITRNRWI 9
+ +NRW+
Sbjct: 125 VRKNRWL 131
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 ITRNRWI 9
+ +NRW+
Sbjct: 125 VRKNRWL 131
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 ITRNRWI 9
+ +NRW+
Sbjct: 125 VRKNRWL 131
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 ITRNRWI 9
+ +NRW+
Sbjct: 125 VRKNRWL 131
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 ITRNRWI 9
+ +NRW+
Sbjct: 125 VRKNRWL 131
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 1 IDITRNR 7
+D+ RNR
Sbjct: 216 LDVVRNR 222
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 2 DITRNRWI 9
D T N WI
Sbjct: 468 DATHNCWI 475
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 1 IDITRNR 7
+D+ RNR
Sbjct: 216 LDVVRNR 222
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 1 IDITRNR 7
+D+ RNR
Sbjct: 216 LDVVRNR 222
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 IDITRNR 7
+D+ RNR
Sbjct: 216 LDVVRNR 222
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 1 IDITRNR 7
+D+ RNR
Sbjct: 216 LDVVRNR 222
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 IDITRNR 7
+D+ RNR
Sbjct: 216 LDVVRNR 222
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 IDITRNR 7
+D+ RNR
Sbjct: 216 LDVVRNR 222
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 IDITRNR 7
+D+ RNR
Sbjct: 216 LDVVRNR 222
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 1 IDITRNR 7
+D+ RNR
Sbjct: 216 LDVVRNR 222
55|SequenceR|280|271|ATVVGIDITR
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 VVGIDITR 10
+VGID+ R
Sbjct: 1304 IVGIDVVR 1311
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 ATVVGIDITR 10
A + GI+ITR
Sbjct: 603 ARLAGINITR 612
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 ATVVGIDITR 10
A + GI+ITR
Sbjct: 603 ARLAGINITR 612
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 ATVVGIDITR 10
A + GI+ITR
Sbjct: 602 ARLAGINITR 611
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 ATVVGIDITR 10
A + GI+ITR
Sbjct: 602 ARLAGINITR 611
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 ATVVGIDITR 10
A + GI+ITR
Sbjct: 602 ARLAGINITR 611
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 ATVVGIDITR 10
A + GI+ITR
Sbjct: 602 ARLAGINITR 611
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 VVGIDITR 10
V G+D+TR
Sbjct: 132 VAGVDVTR 139
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 VVGIDITR 10
V G+D+TR
Sbjct: 132 VAGVDVTR 139
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 4 VGIDITR 10
+GI+ITR
Sbjct: 231 IGINITR 237
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 2 TVVGID 7
TV+GID
Sbjct: 35 TVIGID 40
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TVVGID 7
TV+GID
Sbjct: 35 TVIGID 40
56|SequenceR|285|276|NLAEEATVVG
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 3 AEEATV 8
AEEATV
Sbjct: 510 AEEATV 515
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 LAEEATVVG 10
+AE A++VG
Sbjct: 134 IAEHASLVG 142
>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)
Query: 2 LAEEATV 8
+AEEAT+
Sbjct: 171 VAEEATI 177
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 2 LAEEATVVG 10
+AE A++VG
Sbjct: 134 IAEHASLVG 142
57|SequenceR|290|281|GSFGYNLAEE
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 GSFGYN 6
GS+GYN
Sbjct: 774 GSYGYN 779
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 1 GSFGY 5
GSFGY
Sbjct: 269 GSFGY 273
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GSFGY 5
GSFGY
Sbjct: 256 GSFGY 260
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 GSFGYNLA 8
FGYN A
Sbjct: 368 AQFGYNQA 375
58|SequenceR|295|286|GRLMVGSFGY
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 VGSFGY 10
VGSFGY
Sbjct: 2484 VGSFGY 2489
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 GRLMVGSFG 9
G+L+ GSFG
Sbjct: 621 GKLVKGSFG 629
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 1 GRLMVGSFG 9
G+L+ GSFG
Sbjct: 622 GKLVKGSFG 630
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 1 GRLMVGSFG 9
G+L+ GSFG
Sbjct: 622 GKLVKGSFG 630
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 GRLMVGSFG 9
G+L+ GSFG
Sbjct: 622 GKLVKGSFG 630
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 GRLMVGSFG 9
G+L+ GSFG
Sbjct: 622 GKLVKGSFG 630
>sp|VE7_HPV31|PROTEIN E7|Human papillomavirus 31
Query: 3 LMVGSFG 9
L++GSFG
Sbjct: 82 LLMGSFG 88
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 1 GRLMVGSFG 9
GRL++ FG
Sbjct: 219 GRLVLTDFG 227
59|SequenceR|300|291|WQIGSGRLMV
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 WQIGSG 6
W IGSG
Sbjct: 1183 WTIGSG 1188
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 WQIGSG 6
W IGSG
Sbjct: 1183 WTIGSG 1188
>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 WQIGSG 6
WQ+G+G
Sbjct: 56 WQVGAG 61
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 WQIGSGRL 8
WQ SG++
Sbjct: 4 WQAASGKV 11
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 WQIGSGRL 8
WQ SG++
Sbjct: 4 WQAASGKV 11
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 WQIGSGRL 8
WQ SG++
Sbjct: 4 WQAASGKV 11
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 WQIGSGRL 8
WQ SG++
Sbjct: 33 WQAASGKV 40
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 WQIGSGRL 8
WQ SG++
Sbjct: 4 WQAASGKV 11
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 3 IGSGRLM 9
IG+GRL+
Sbjct: 582 IGAGRLV 588
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 3 IGSGRLM 9
IG+GRL+
Sbjct: 582 IGAGRLV 588
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 IGSGRLM 9
IG+GRL+
Sbjct: 582 IGAGRLV 588
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 IGSGRLM 9
IG+GRL+
Sbjct: 582 IGAGRLV 588
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 IGSGRLM 9
IG+GRL+
Sbjct: 574 IGAGRLV 580
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 3 IGSGRLM 9
IG+GRL+
Sbjct: 582 IGAGRLV 588
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 3 IGSGRLM 9
IG+GRL+
Sbjct: 582 IGAGRLV 588
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 3 IGSGRLM 9
IG+GRL+
Sbjct: 582 IGAGRLV 588
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 3 IGSGRLM 9
IG+GRL+
Sbjct: 582 IGAGRLV 588
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 WQIGSGRLMV 10
WQ +G+L V
Sbjct: 957 WQEEAGKLTV 966
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 WQIGSGRLMV 10
WQ +G+L V
Sbjct: 956 WQEEAGKLTV 965
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 WQIGSGRLMV 10
WQ +G+L V
Sbjct: 956 WQEEAGKLTV 965
>sp|DYR_HHV8P|PUTATIVE Dihydrofolate reductase|Human herpesvirus 8 type P
Query: 1 WQIGSGRL 8
W IG G L
Sbjct: 113 WVIGGGNL 120
>sp|UL04_HCMVT|EARLY glycoprotein GP48|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 WQIGSG 6
W +GSG
Sbjct: 73 WLLGSG 78
>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 WQIGSG 6
WQ+G G
Sbjct: 79 WQLGHG 84
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 WQIGSG 6
WQ GSG
Sbjct: 502 WQSGSG 507
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 WQIGSG 6
WQ GSG
Sbjct: 502 WQSGSG 507
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 WQIGSG 6
WQ GSG
Sbjct: 502 WQSGSG 507
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 WQIGSG 6
WQ GSG
Sbjct: 502 WQSGSG 507
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 WQIGSG 6
WQ GSG
Sbjct: 502 WQSGSG 507
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 WQIGSG 6
WQ GSG
Sbjct: 502 WQSGSG 507
60|SequenceR|305|296|TKRLDWQIGS
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 TKRLDWQIGS 10
T R+ W IGS
Sbjct: 1178 TSRISWTIGS 1187
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 TKRLDWQIGS 10
T R+ W IGS
Sbjct: 1178 TSRISWTIGS 1187
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 KRLDWQIGS 10
KRL W IG+
Sbjct: 1206 KRLAWTIGN 1214
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 KRLDWQI 8
KR+DW I
Sbjct: 6213 KRVDWTI 6219
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 LDWQIGS 10
++WQ+GS
Sbjct: 136 VEWQVGS 142
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 KRLDWQI 8
KR+DW +
Sbjct: 6190 KRVDWSV 6196
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 5 DWQIG 9
DWQ+G
Sbjct: 412 DWQLG 416
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 5 DWQIG 9
DWQ+G
Sbjct: 412 DWQLG 416
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 5 DWQIG 9
DWQ+G
Sbjct: 426 DWQLG 430
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 5 DWQIG 9
DWQ+G
Sbjct: 412 DWQLG 416
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 5 DWQIG 9
DWQ+G
Sbjct: 417 DWQLG 421
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 5 DWQIG 9
DWQ+G
Sbjct: 417 DWQLG 421
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 5 DWQIG 9
DWQ+G
Sbjct: 417 DWQLG 421
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 KRLDWQI 8
+R+DW I
Sbjct: 6196 ERVDWDI 6202
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 RLDWQIGS 10
RL W IG+
Sbjct: 1207 RLAWTIGN 1214
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 RLDWQIGS 10
RL W IG+
Sbjct: 1207 RLAWTIGN 1214
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 RLDWQIGS 10
RL W IG+
Sbjct: 1207 RLAWTIGN 1214
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 5 DWQIG 9
DWQ G
Sbjct: 430 DWQFG 434
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 5 DWQIG 9
DWQ G
Sbjct: 426 DWQFG 430
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 RLDWQIGS 10
RL W IG+
Sbjct: 1207 RLAWTIGN 1214
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 5 DWQIG 9
DWQ G
Sbjct: 431 DWQFG 435
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 4 LDWQIG 9
DWQ G
Sbjct: 432 FDWQFG 437
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 2 KRLDWQIG 9
+ LD+QIG
Sbjct: 308 QNLDYQIG 315
>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24
Query: 2 KRLDWQIGS 10
K +DW +GS
Sbjct: 455 KGVDWSLGS 463
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 2 KRLDWQIG 9
+ LD+QIG
Sbjct: 308 QNLDYQIG 315
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 2 KRLDWQIG 9
+ LD+QIG
Sbjct: 308 QNLDYQIG 315
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 2 KRLDWQIG 9
+ LD+QIG
Sbjct: 308 QNLDYQIG 315
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 2 KRLDWQIG 9
+ LD+QIG
Sbjct: 308 QNLDYQIG 315
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 2 KRLDWQIG 9
+ LD+QIG
Sbjct: 308 QNLDYQIG 315
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 KRLDWQIG 9
+ LD+QIG
Sbjct: 308 QNLDYQIG 315
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 5 DWQIG 9
DWQ G
Sbjct: 400 DWQFG 404
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 2 KRLDWQIG 9
+ LD+QIG
Sbjct: 308 QNLDYQIG 315
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 1 TKRLDWQIG 9
+ LD+QIG
Sbjct: 307 NQNLDYQIG 315
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 WQIGS 10
WQ+GS
Sbjct: 839 WQVGS 843
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 5 DWQIG 9
DW++G
Sbjct: 1230 DWEVG 1234
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Dumas)
Query: 5 DWQIG 9
DW++G
Sbjct: 1230 DWEVG 1234
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 5 DWQIGS 10
DW IG+
Sbjct: 3409 DWYIGA 3414
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 DWQIGS 10
DW IG+
Sbjct: 3409 DWYIGA 3414
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 LDWQIG 9
L W+IG
Sbjct: 5462 LSWEIG 5467
>sp|VP2_LORDV|MINOR capsid protein VP2|Lordsdale virus (strain GII/Human/United
Query: 1 TKRLDW 6
TK LDW
Sbjct: 106 TKALDW 111
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 2 KRLDWQIG 9
+ LD+QIG
Sbjct: 292 QNLDYQIG 299
61|SequenceR|310|301|VDYPQTKRLD
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DYPQTKRLD 10
DYPQT L+
Sbjct: 419 DYPQTSDLE 427
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DYPQTKRLD 10
DYPQT L+
Sbjct: 419 DYPQTSDLE 427
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 DYPQTKRL 9
DY Q KRL
Sbjct: 850 DYRQAKRL 857
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DYPQTKRLD 10
+YP+TK D
Sbjct: 1867 EYPKTKLTD 1875
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DYPQTKRLD 10
+YP+TK D
Sbjct: 1867 EYPKTKLTD 1875
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DYPQTKRLD 10
+YP+TK D
Sbjct: 1867 EYPKTKLTD 1875
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DYPQTKRLD 10
+YP+TK D
Sbjct: 1867 EYPKTKLTD 1875
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DYPQTKRLD 10
+YP+TK D
Sbjct: 1867 EYPKTKLTD 1875
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 1 VDYPQTK 7
V YPQTK
Sbjct: 209 VMYPQTK 215
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 VDYPQTKR 8
DYP TK+
Sbjct: 431 ADYPPTKK 438
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 1 VDYPQTKRLD 10
VDY KRL+
Sbjct: 232 VDYVLMKRLE 241
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 1 VDYPQTKRLD 10
VDY KRL+
Sbjct: 232 VDYVLMKRLE 241
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 DYPQTK 7
+YP+TK
Sbjct: 1893 EYPKTK 1898
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 YPQTKRL 9
+P+T+RL
Sbjct: 348 FPETQRL 354
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 1 VDYPQTKRLD 10
VDY KRL+
Sbjct: 234 VDYVLMKRLE 243
62|SequenceR|315|306|EVQDYVDYPQ
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 VQDYVDYP 9
++DYVD P
Sbjct: 1841 LKDYVDTP 1848
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 VQDYVDYP 9
++DY+D P
Sbjct: 1841 LKDYIDTP 1848
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 QDYVDYPQ 10
Q Y D PQ
Sbjct: 387 QKYTDRPQ 394
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 1 EVQDYVD 7
E+QDY D
Sbjct: 365 EMQDYAD 371
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 DYVDY 8
DYVDY
Sbjct: 5138 DYVDY 5142
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 EVQDYVD 7
E+QDY D
Sbjct: 188 ELQDYED 194
Query: 1 EVQDYVD 7
EVQ+Y++
Sbjct: 3633 EVQNYIE 3639
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 DYVDY 8
DYVDY
Sbjct: 5158 DYVDY 5162
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 DYVDY 8
DYVDY
Sbjct: 5188 DYVDY 5192
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 5 YVDYPQ 10
YVD PQ
Sbjct: 899 YVDLPQ 904
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 VQDYVD 7
V+DYVD
Sbjct: 657 VRDYVD 662
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 5 YVDYPQ 10
YVD PQ
Sbjct: 896 YVDLPQ 901
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 QDYVDY 8
+DYV+Y
Sbjct: 159 EDYVEY 164
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QDYVDY 8
++YVDY
Sbjct: 3365 EEYVDY 3370
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QDYVDY 8
++YVDY
Sbjct: 3365 EEYVDY 3370
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QDYVDY 8
++YVDY
Sbjct: 3365 EEYVDY 3370
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QDYVDY 8
++YVDY
Sbjct: 3365 EEYVDY 3370
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QDYVDY 8
++YVDY
Sbjct: 3365 EEYVDY 3370
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 4 DYVDY 8
DY+DY
Sbjct: 2008 DYIDY 2012
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 VQDYVD 7
V+DYVD
Sbjct: 657 VRDYVD 662
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 QDYVDY 8
++YVDY
Sbjct: 3409 ENYVDY 3414
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 QDYVDY 8
++YVDY
Sbjct: 3409 ENYVDY 3414
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 QDYVDY 8
++YVDY
Sbjct: 3409 ENYVDY 3414
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 QDYVDY 8
++YVDY
Sbjct: 3409 ENYVDY 3414
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 4 DYVDY 8
DY+DY
Sbjct: 2007 DYIDY 2011
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 4 DYVDY 8
DY+DY
Sbjct: 2009 DYIDY 2013
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 4 DYVDY 8
DY+DY
Sbjct: 2011 DYIDY 2015
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 4 DYVDY 8
DY+DY
Sbjct: 2011 DYIDY 2015
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 1 EVQDYVD 7
E++DY++
Sbjct: 341 EIEDYIN 347
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 4 DYVDY 8
DY+DY
Sbjct: 2016 DYIDY 2020
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 2 VQDYVD 7
VQDYV+
Sbjct: 175 VQDYVN 180
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 4 DYVDY 8
DY+DY
Sbjct: 2008 DYIDY 2012
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 4 DYVDY 8
DY+DY
Sbjct: 2008 DYIDY 2012
63|SequenceR|320|311|VPVDFEVQDY
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 1 VPVDFEVQD 9
+P DFE++D
Sbjct: 511 LPTDFELKD 519
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 1 VPVDFEVQD 9
+P DFE++D
Sbjct: 511 LPTDFELKD 519
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 1 VPVDFEVQD 9
+P DFE++D
Sbjct: 511 LPTDFELKD 519
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 1 VPVDFEVQD 9
+P DFE++D
Sbjct: 511 LPTDFELKD 519
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 VPVDFEVQD 9
+P DFE++D
Sbjct: 511 LPTDFELKD 519
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 1 VPVDFEVQD 9
+P DFE++D
Sbjct: 511 LPTDFELKD 519
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 1 VPVDFEVQD 9
+P DFE++D
Sbjct: 511 LPTDFELKD 519
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 PVDFEVQDY 10
P D E++DY
Sbjct: 406 PADNELEDY 414
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 2 PVDFEVQDY 10
P D E++DY
Sbjct: 406 PADNELEDY 414
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 2 PVDFEVQDY 10
P D E++DY
Sbjct: 406 PADNELEDY 414
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 VPVDFEVQDY 10
+ +D EV+DY
Sbjct: 1759 IVMDMEVRDY 1768
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 PVDFEVQDY 10
P+D V DY
Sbjct: 605 PLDIPVSDY 613
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 VPVDFEVQ 8
VPVD E+Q
Sbjct: 1674 VPVDPEIQ 1681
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 VPVDFEVQ 8
VPVD E+Q
Sbjct: 1673 VPVDPEIQ 1680
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 VPVDFEVQDY 10
VPV+ +QDY
Sbjct: 171 VPVERLMQDY 180
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 VPVDFEVQD 9
+ +D EVQD
Sbjct: 1759 ITMDMEVQD 1767
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 VPVDFEVQ 8
VP+D E+Q
Sbjct: 1674 VPIDPEIQ 1681
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 VPVDFEVQ 8
VP+D E+Q
Sbjct: 1674 VPIDPEIQ 1681
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 2 PVDFEVQDY 10
P DF + DY
Sbjct: 317 PDDFRLVDY 325
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 1 VPVDFEVQDY 10
+PV+ +QDY
Sbjct: 188 IPVESLMQDY 197
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 VPVDFEVQ 8
+PVD E+Q
Sbjct: 1673 LPVDPEIQ 1680
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 3 VDFEVQDY 10
VD ++DY
Sbjct: 280 VDINIKDY 287
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 VPVDFEVQDY 10
+ +D EV+D+
Sbjct: 1748 IVLDMEVRDF 1757
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 4 DFEVQDY 10
DF++QD+
Sbjct: 396 DFKLQDF 402
64|SequenceR|325|316|DGRSGVPVDF
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 DGRSGVPV 8
DG SG PV
Sbjct: 548 DGMSGAPV 555
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 DGRSGVPV 8
DG SG PV
Sbjct: 548 DGMSGAPV 555
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 DGRSGVPV 8
DG SG PV
Sbjct: 549 DGMSGAPV 556
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 DGRSGVPV 8
DG SG PV
Sbjct: 548 DGMSGAPV 555
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 DGRSGVPV 8
DG SG PV
Sbjct: 548 DGMSGAPV 555
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 DGRSGVPV 8
DG SG PV
Sbjct: 548 DGMSGAPV 555
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 DGRSGVPV 8
DG SG PV
Sbjct: 548 DGMSGAPV 555
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 DGRSGVPV 8
DG SG PV
Sbjct: 549 DGMSGAPV 556
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 1 DGRSGVPVD 9
+G +GVPV+
Sbjct: 29 EGENGVPVE 37
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 DGRSGVPV 8
DG+ VPV
Sbjct: 48 DGKESVPV 55
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 2 GRSGVPV 8
G+SG+P+
Sbjct: 224 GKSGIPL 230
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 2 GRSGVPV 8
G+SG+P+
Sbjct: 225 GKSGIPL 231
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 3 RSGVPVD 9
R+GVP+D
Sbjct: 216 RAGVPLD 222
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RSGVPVDF 10
+ G+P DF
Sbjct: 12 KVGIPTDF 19
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RSGVPVDF 10
+ G+P DF
Sbjct: 12 KVGIPTDF 19
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 1 DGRSGVPVD 9
+ +SGVP+D
Sbjct: 217 EDKSGVPLD 225
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 DGRSGVP 7
DG+ G+P
Sbjct: 1746 DGKEGMP 1752
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 GRSGVPVDF 10
G+S P+D+
Sbjct: 1312 GQSNDPIDY 1320
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 GRSGVPVDF 10
G+S P+D+
Sbjct: 1312 GQSNDPIDY 1320
>sp|PHOSP_MUMP1|PHOSPHOPROTEIN virus (strain SBL-1) (MuV)
Query: 4 SGVPVD 9
+GVPVD
Sbjct: 281 TGVPVD 286
>sp|PHOSP_MUMPJ|PHOSPHOPROTEIN virus genotype A (strain
Query: 4 SGVPVD 9
+GVPVD
Sbjct: 282 TGVPVD 287
>sp|PHOSP_MUMPS|PHOSPHOPROTEIN virus (strain SBL) (MuV)
Query: 4 SGVPVD 9
+GVPVD
Sbjct: 282 TGVPVD 287
>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)
Query: 4 SGVPVD 9
+GVPVD
Sbjct: 282 TGVPVD 287
>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain
Query: 4 SGVPVD 9
+GVPVD
Sbjct: 282 TGVPVD 287
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GRSGVPV 8
+SGVPV
Sbjct: 342 AKSGVPV 348
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GRSGVPV 8
+SGVPV
Sbjct: 342 AKSGVPV 348
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GRSGVPV 8
+SGVPV
Sbjct: 342 AKSGVPV 348
65|SequenceR|330|321|YRDYCDGRSG
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 DYCDGRSG 10
DYCDG G
Sbjct: 2037 DYCDGSLG 2044
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 DYCDGRSG 10
DYCDG G
Sbjct: 2037 DYCDGSLG 2044
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 YCDGRS 9
YCDG S
Sbjct: 2467 YCDGHS 2472
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 4 YCDGRS 9
YCDG S
Sbjct: 2440 YCDGHS 2445
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 YCDGRS 9
YCDG S
Sbjct: 2445 YCDGHS 2450
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 DYCDGRS 9
D+CDG +
Sbjct: 1053 DFCDGTT 1059
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 DYCDGRS 9
D+CDG +
Sbjct: 1053 DFCDGTT 1059
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 DYCDGRS 9
D+CDG +
Sbjct: 1053 DFCDGTT 1059
>sp|MATRX_VSIVA|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 YRDYCDGRS 9
Y +C+GR+
Sbjct: 131 YHTHCEGRA 139
>sp|MATRX_VSIVN|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 YRDYCDGRS 9
Y +C+GR+
Sbjct: 131 YHAHCEGRA 139
>sp|MATRX_VSIVG|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 YRDYCDGRS 9
Y +C+GR+
Sbjct: 131 YHAHCEGRA 139
>sp|MATRX_VSIVS|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 YRDYCDGRS 9
Y +C+GR+
Sbjct: 131 YHAHCEGRA 139
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 YCDGRSG 10
YC RSG
Sbjct: 78 YCRARSG 84
Query: 2 RDYCDGR 8
RDY GR
Sbjct: 420 RDYIPGR 426
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 1 YRDYC 5
YR+YC
Sbjct: 603 YRNYC 607
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 1 YRDYC 5
YR+YC
Sbjct: 603 YRNYC 607
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 YCDGRSG 10
YC RSG
Sbjct: 78 YCRARSG 84
Query: 2 RDYCDGR 8
RDY GR
Sbjct: 420 RDYIPGR 426
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 YCDGRSG 10
YC RSG
Sbjct: 78 YCRARSG 84
Query: 2 RDYCDGR 8
RDY GR
Sbjct: 420 RDYIPGR 426
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 YCDGRSG 10
YC RSG
Sbjct: 78 YCRARSG 84
Query: 2 RDYCDGR 8
RDY GR
Sbjct: 420 RDYIPGR 426
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 YRDYC 5
YR+YC
Sbjct: 604 YRNYC 608
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 YRDYC 5
YR+YC
Sbjct: 604 YRNYC 608
>sp|MATRX_VSIVC|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 YRDYCDGRS 9
Y +C+GR+
Sbjct: 131 YHAHCEGRA 139
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 4 YCDGRSG 10
YC RSG
Sbjct: 78 YCRARSG 84
Query: 2 RDYCDGR 8
RDY GR
Sbjct: 420 RDYIPGR 426
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 RDYCDGRS 9
RD+C G S
Sbjct: 1054 RDHCPGTS 1061
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 2 RDYCDG 7
RDY DG
Sbjct: 515 RDYLDG 520
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 RDYCDG 7
RDY DG
Sbjct: 508 RDYLDG 513
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 RDYCDG 7
RDY DG
Sbjct: 508 RDYLDG 513
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 2 RDYCDG 7
RDY DG
Sbjct: 508 RDYLDG 513
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 RDYCDG 7
RDY DG
Sbjct: 500 RDYLDG 505
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 2 RDYCDG 7
RDY DG
Sbjct: 500 RDYLDG 505
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 YCDGRSG 10
YC RSG
Sbjct: 78 YCRARSG 84
Query: 2 RDYCDGR 8
RDY GR
Sbjct: 420 RDYIPGR 426
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 YRDYCDG 7
Y+++CD
Sbjct: 984 YKEFCDA 990
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 2 RDYCDG 7
RDY DG
Sbjct: 499 RDYLDG 504
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 DYCDGRS 9
DYC G S
Sbjct: 560 DYCGGNS 566
>sp|VP6_ROTGI|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Rat/United
Query: 3 DYCDGRSG 10
DY D RSG
Sbjct: 78 DYDDMRSG 85
>sp|VP6_ROTGA|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate
Query: 3 DYCDGRSG 10
DY D RSG
Sbjct: 78 DYDDMRSG 85
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 2 RDYCDGRSG 10
RDY + R G
Sbjct: 263 RDYLNQRQG 271
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 3 DYCDGR 8
++CDG+
Sbjct: 465 EFCDGK 470
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DYCDGR 8
++CDG+
Sbjct: 465 EFCDGK 470
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 DYCDGRSG 10
DY GR G
Sbjct: 2161 DYMQGRPG 2168
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 YRDYCD 6
Y D+CD
Sbjct: 1088 YLDHCD 1093
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 YRDYCD 6
Y D+CD
Sbjct: 1088 YLDHCD 1093
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 YRDYCD 6
Y D+CD
Sbjct: 1089 YLDHCD 1094
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 YRDYCD 6
Y D+CD
Sbjct: 1089 YLDHCD 1094
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 YRDYCD 6
Y D+CD
Sbjct: 1088 YLDHCD 1093
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 YRDYCD 6
Y D+CD
Sbjct: 1088 YLDHCD 1093
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 DYCDGRS 9
DYC G++
Sbjct: 1731 DYCIGKN 1737
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 DYCDGRS 9
DYC G++
Sbjct: 1731 DYCIGKN 1737
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 RDYCDGR 8
RDY GR
Sbjct: 420 RDYIPGR 426
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 RDYCDGR 8
RDY GR
Sbjct: 420 RDYIPGR 426
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 YCDGRS 9
YCDG +
Sbjct: 93 YCDGSA 98
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 YCDGRS 9
YCDG +
Sbjct: 93 YCDGSA 98
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 RDYCDGR 8
RDY GR
Sbjct: 420 RDYIPGR 426
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 5 CDGRS 9
CDGR+
Sbjct: 124 CDGRT 128
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 DYCDGRS 9
DYC G +
Sbjct: 301 DYCPGST 307
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 DYCDGRS 9
DYC G +
Sbjct: 301 DYCPGST 307
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DYCDGRSG 10
D DGR+G
Sbjct: 867 DSLDGRTG 874
66|SequenceR|335|326|EVRCLYRDYC
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 4 CLYRDYC 10
CLY+ +C
Sbjct: 175 CLYKQHC 181
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 RCLYRDY 9
RC++ DY
Sbjct: 881 RCVWEDY 887
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 RCLYRDY 9
RC++ DY
Sbjct: 878 RCVWEDY 884
>sp|RUVV_MONPV|RESOLVASE OPG149|Monkeypox virus (MPXV)
Query: 3 RCLYRDY 9
RC YR+Y
Sbjct: 177 RCKYRNY 183
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 EVRCLYRDY 9
E RC+ R+Y
Sbjct: 805 EWRCVAREY 813
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 RCLYRD 8
+CLYR+
Sbjct: 920 KCLYRN 925
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 RCLYRD 8
+CLYR+
Sbjct: 920 KCLYRN 925
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 EVRCLYRDY 9
E RC+ R+Y
Sbjct: 805 EWRCVAREY 813
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 RCLYRDYC 10
R LYR YC
Sbjct: 242 RQLYRLYC 249
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RCLYRDYC 10
R LYR YC
Sbjct: 242 RQLYRLYC 249
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 RCLYRDYC 10
R LYR YC
Sbjct: 242 RQLYRLYC 249
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 RCLYRDY 9
+C YR++
Sbjct: 919 KCFYRNF 925
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 RCLYRDY 9
+C YR++
Sbjct: 919 KCFYRNF 925
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 VRCLYRDYC 10
VRC+ D C
Sbjct: 1721 VRCVNGDSC 1729
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 CLYRDY 9
C+++DY
Sbjct: 891 CVWKDY 896
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 RCLYRDY 9
+C++ DY
Sbjct: 889 KCVWEDY 895
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 1 EVRCLYRDY 9
EV C+ R Y
Sbjct: 334 EVDCVCRQY 342
>sp|YVCC_VACCC|UNCHARACTERIZED 9.2 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VRCLYR 7
VRCL+R
Sbjct: 57 VRCLHR 62
>sp|M2_I77A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 RCLYRDY 9
+C+YR +
Sbjct: 49 KCIYRSF 55
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 RCLYRDY 9
+CL R+Y
Sbjct: 671 KCLAREY 677
67|SequenceR|340|331|SQRMEEVRCL
>sp|NEP_I03A0|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I00A0|NUCLEAR export protein|Influenza A virus (strain A/Duck/Hong
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I02A6|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I02A5|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I03A1|NUCLEAR export protein|Influenza A virus (strain
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I97A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I24A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Japan/1924
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 67 SQKFEEIRWL 76
>sp|NEP_I01A1|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I01A0|NUCLEAR export protein|Influenza A virus (strain A/Silky
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I02A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I78A4|NUCLEAR export protein|Influenza A virus (strain A/Mallard/New
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I18A0|NUCLEAR export protein|Influenza A virus (strain A/Brevig
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I02A4|NUCLEAR export protein|Influenza A virus (strain A/Silky
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I02A3|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I02A2|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I02A1|NUCLEAR export protein|Influenza A virus (strain A/Guinea
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I01A3|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I97A1|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I80A2|NUCLEAR export protein|Influenza A virus (strain
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I78A3|NUCLEAR export protein|Influenza A virus (strain A/Mallard/New
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I59A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I01A2|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I85A3|NUCLEAR export protein|Influenza A virus (strain
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I96A0|NUCLEAR export protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I82A8|NUCLEAR export protein|Influenza A virus (strain
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I77A9|NUCLEAR export protein|Influenza A virus (strain A/Equine/New
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 70 SQKFEEIRWL 79
>sp|NEP_I02A7|NUCLEAR export protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 60 SQKFEEIRWL 69
>sp|NEP_I73A4|NUCLEAR export protein|Influenza A virus (strain
Query: 1 SQRMEEVRCL 10
SQ+ EE+R L
Sbjct: 67 SQKFEEIRWL 76
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 5 EEVRCL 10
EEV+CL
Sbjct: 440 EEVKCL 445
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 3 RMEEVRC 9
R+E+ RC
Sbjct: 217 RLEKARC 223
68|SequenceR|345|336|AIIRLSQRME
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 AIIRLSQRME 10
A IRL QR+E
Sbjct: 740 AYIRLLQRLE 749
>sp|VPR_HV192|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 1 AIIRLSQRM 9
AIIR+ QR+
Sbjct: 59 AIIRILQRL 67
69|SequenceR|350|341|KNLCQAIIRL
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 3 LCQAIIRL 10
+C+AIIR+
Sbjct: 13 VCEAIIRV 20
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 KNLCQAIIR 9
+ LCQAI +
Sbjct: 620 EELCQAIFK 628
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 NLCQAI 7
N+CQA+
Sbjct: 5087 NICQAV 5092
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 NLCQAI 7
N+CQA+
Sbjct: 5064 NICQAV 5069
>sp|VE7_HPV41|PROTEIN E7|Human papillomavirus type 41
Query: 3 LCQAIIRL 10
CQAIIR
Sbjct: 64 FCQAIIRF 71
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 NLCQAI 7
N+CQA+
Sbjct: 5148 NICQAV 5153
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 NLCQAI 7
N+CQA+
Sbjct: 5060 NICQAV 5065
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 NLCQAI 7
N+CQA+
Sbjct: 5118 NICQAV 5123
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 NLCQAI 7
N+CQA+
Sbjct: 5098 NICQAV 5103
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 3 LCQAIIRL 10
+C+A+IR+
Sbjct: 13 VCEAVIRV 20
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 1 KNLCQAII 8
KNLC++ +
Sbjct: 485 KNLCKSTV 492
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 1 KNLCQAII 8
KN+CQ I
Sbjct: 353 KNVCQQAI 360
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 NLCQAIIR 9
NLC +IR
Sbjct: 3137 NLCVQLIR 3144
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 KNLCQAIIRL 10
++LCQ +RL
Sbjct: 144 ESLCQFFLRL 153
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 KNLCQAIIRL 10
++LCQ +RL
Sbjct: 144 ESLCQFFLRL 153
70|SequenceR|355|346|EGPPMKNLCQ
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 PPMKNL 8
PPMKNL
Sbjct: 457 PPMKNL 462
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 3 PPMKNL 8
PPMKNL
Sbjct: 457 PPMKNL 462
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 PPMKNL 8
PPMKNL
Sbjct: 457 PPMKNL 462
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 3 PPMKNL 8
PPMKNL
Sbjct: 457 PPMKNL 462
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 3 PPMKNL 8
PPMKNL
Sbjct: 457 PPMKNL 462
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 EGPPMK 6
EGPP+K
Sbjct: 2022 EGPPIK 2027
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 EGPPMK 6
EGPP+K
Sbjct: 2022 EGPPIK 2027
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 EGPPMKNL 8
+GPPM+ +
Sbjct: 1462 DGPPMREI 1469
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 EGPPMKNL 8
+GPPM+ +
Sbjct: 1462 DGPPMREI 1469
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 EGPPMKNL 8
+GPPM+ +
Sbjct: 1458 DGPPMREI 1465
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PPMKNLCQ 10
PP LCQ
Sbjct: 181 PPCHTLCQ 188
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PPMKNLCQ 10
PP LCQ
Sbjct: 181 PPCHTLCQ 188
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 5 MKNLCQ 10
M+NLCQ
Sbjct: 1 MENLCQ 6
>sp|UL116_HCMVM|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPMKNLC 9
PP ++LC
Sbjct: 159 PPAQDLC 165
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 GPPMKNLC 9
G P K LC
Sbjct: 266 GTPAKKLC 273
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 GPPMKNLC 9
G P K LC
Sbjct: 266 GTPAKKLC 273
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 5 MKNLCQ 10
M+NLCQ
Sbjct: 1 MENLCQ 6
>sp|UL116_HCMVA|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPMKNLC 9
PP ++LC
Sbjct: 161 PPAQDLC 167
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 PPMKNL 8
PPMK+L
Sbjct: 457 PPMKSL 462
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 1 EGPPMKNLCQ 10
+GPP CQ
Sbjct: 308 QGPPRTFTCQ 317
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 EGPPMKNLC 9
E PM+ LC
Sbjct: 385 ETTPMQRLC 393
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 EGPPMKNLC 9
E PM+ LC
Sbjct: 385 ETTPMQRLC 393
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 EGPPMKNLC 9
EGP ++ LC
Sbjct: 104 EGPGLEALC 112
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EGPPMKNLC 9
EGP ++ LC
Sbjct: 104 EGPGLEALC 112
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 EGPPMKNLC 9
EGP ++ LC
Sbjct: 104 EGPGLEALC 112
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 1 EGPPMKNLCQ 10
+GPP CQ
Sbjct: 307 QGPPRTFTCQ 316
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 1 EGPPMKNLCQ 10
+GPP CQ
Sbjct: 308 QGPPRTFTCQ 317
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 2 GPPMKNL 8
GPP++ L
Sbjct: 279 GPPLREL 285
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 3 PPMKNLC 9
PP+ +LC
Sbjct: 83 PPVVDLC 89
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PPMKNLC 9
PP+ +LC
Sbjct: 83 PPVVDLC 89
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 3 PPMKNLC 9
PP+ +LC
Sbjct: 83 PPVVDLC 89
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 3 PPMKNLC 9
P +KN+C
Sbjct: 296 PCIKNIC 302
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 3 PPMKNLCQ 10
PP LCQ
Sbjct: 217 PPCHLLCQ 224
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 5 MKNLCQ 10
+KNLC+
Sbjct: 28 LKNLCR 33
>sp|US19_HCMVM|TRANSMEMBRANE protein US19|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPMKNLCQ 10
PP+ LC+
Sbjct: 51 PPVAELCE 58
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 GPPMKNLC 9
GP M LC
Sbjct: 1085 GPNMYGLC 1092
>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PPMKNLCQ 10
PP+ LC+
Sbjct: 51 PPVAELCE 58
>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPMKNLCQ 10
PP+ LC+
Sbjct: 51 PPVAELCE 58
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GPPMKNLCQ 10
G +KNLC+
Sbjct: 859 GIKVKNLCK 867
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 EGPPMK 6
EGPP K
Sbjct: 59 EGPPAK 64
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 EGPPMK 6
EGPP K
Sbjct: 59 EGPPAK 64
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 EGPPMK 6
EGPP K
Sbjct: 59 EGPPAK 64
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 EGPPMK 6
EGPP K
Sbjct: 59 EGPPAK 64
71|SequenceR|360|351|DDVKIEGPPM
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 VKIEGPPM 10
V EGPP+
Sbjct: 2019 VSFEGPPI 2026
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 VKIEGPPM 10
V EGPP+
Sbjct: 2019 VSFEGPPI 2026
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 DDVKIEGPP 9
DDV I G P
Sbjct: 227 DDVPISGEP 235
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 DDVKIEGPP 9
DDV I G P
Sbjct: 227 DDVPISGEP 235
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 DVKIEGPPM 10
D+ +EG PM
Sbjct: 1979 DILMEGSPM 1987
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DVKIEGPP 9
D+KI+G P
Sbjct: 505 DLKIKGAP 512
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 VKIEGPP 9
V ++GPP
Sbjct: 5588 VTVQGPP 5594
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 5 IEGPP 9
IEGPP
Sbjct: 381 IEGPP 385
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 3 VKIEGPP 9
+ IEGPP
Sbjct: 379 LDIEGPP 385
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 DDVKIEGPPM 10
DDV ++ PM
Sbjct: 639 DDVAVQIDPM 648
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 DDVKIE 6
DDV+IE
Sbjct: 530 DDVRIE 535
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 DVKIEGPPM 10
+VK EG P+
Sbjct: 778 EVKREGKPL 786
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 3 VKIEGPP 9
+ I+GPP
Sbjct: 475 IVIQGPP 481
>sp|VP30_EBOSU|TRANSCRIPTIONAL activator VP30|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 DDVKIEGPP 9
DD K +G P
Sbjct: 132 DDFKQDGSP 140
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 DVKIEG 7
DVK+EG
Sbjct: 797 DVKVEG 802
72|SequenceR|365|356|PSVKADDVKI
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 VKADDVKI 10
VKADDV I
Sbjct: 224 VKADDVPI 231
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 VKADDVKI 10
VKADDV I
Sbjct: 224 VKADDVPI 231
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 4 KADDVKI 10
KADDV++
Sbjct: 181 KADDVRV 187
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PSVKADD 7
PSV AD+
Sbjct: 174 PSVSADE 180
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PSVKADD 7
PSV AD+
Sbjct: 174 PSVSADE 180
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 3 VKADDV 8
VKADDV
Sbjct: 1727 VKADDV 1732
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 VKADDV 8
VKADDV
Sbjct: 1727 VKADDV 1732
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 VKADDVK 9
VK DDV+
Sbjct: 389 VKGDDVR 395
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 4 KADDVK 9
KADD+K
Sbjct: 804 KADDLK 809
73|SequenceR|370|361|EARKPPSVKA
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 2 ARKPPSVKA 10
+R+PPSV+A
Sbjct: 921 SRRPPSVQA 929
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 ARKPPSVKA 10
+R+PPSV+A
Sbjct: 921 SRRPPSVQA 929
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 2 ARKPPSVKA 10
+R+PPSV+A
Sbjct: 921 SRRPPSVQA 929
>sp|SCP_HHV8P|SMALL capsomere-interacting protein|Human herpesvirus 8 type P
Query: 1 EARKPPSVK 9
+ARKPPS K
Sbjct: 160 DARKPPSGK 168
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 ARKPPSVKA 10
+R+PPSV+A
Sbjct: 921 SRRPPSVQA 929
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 ARKPPSVKA 10
+R+PPSV+A
Sbjct: 921 SRRPPSVQA 929
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 ARKPPS 7
ARKPPS
Sbjct: 1158 ARKPPS 1163
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 ARKPPS 7
ARKPPS
Sbjct: 1158 ARKPPS 1163
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 EARKPPSVKA 10
E R PP +KA
Sbjct: 2492 EIRIPPEIKA 2501
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 1 EARKPPSV 8
EAR PP V
Sbjct: 311 EARDPPLV 318
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 1 EARKPPSV 8
EAR PP +
Sbjct: 318 EARDPPMI 325
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 1 EARKPPSV 8
EAR PP +
Sbjct: 318 EARDPPMI 325
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 1 EARKPPSV 8
EAR PP +
Sbjct: 295 EARDPPVI 302
>sp|CAP6_ADE41|PRE-PROTEIN VI|Human adenovirus F serotype 41
Query: 1 EARKPPS 7
E+R+PPS
Sbjct: 162 ESREPPS 168
>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5
Query: 1 EARKPPSV 8
EAR PP +
Sbjct: 427 EARDPPVI 434
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 1 EARKPPSV 8
EAR PP +
Sbjct: 365 EARDPPVI 372
>sp|CAP6_ADE40|PRE-PROTEIN VI|Human adenovirus F serotype 40
Query: 1 EARKPPS 7
E+R+PPS
Sbjct: 162 ESREPPS 168
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 1 EARKPPSV 8
EAR PP +
Sbjct: 419 EARDPPVI 426
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 1 EARKPP 6
EAR PP
Sbjct: 319 EARDPP 324
>sp|VE8E2_HPV05|PROTEIN E8^E2C|Human papillomavirus 5
Query: 1 EARKPPSV 8
EAR PP +
Sbjct: 236 EARDPPVI 243
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 2 ARKPPSVK 9
AR+PP+++
Sbjct: 20 ARRPPTME 27
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 2 ARKPPSVK 9
AR+PP+++
Sbjct: 20 ARRPPTME 27
74|SequenceR|375|366|MSTKMEARKP
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 STKMEARKP 10
+TK+EAR P
Sbjct: 345 NTKVEARCP 353
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 MSTKMEARK 9
M+TK+E R+
Sbjct: 214 MTTKLELRQ 222
75|SequenceR|380|371|HILSEMSTKM
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 LSEMSTKM 10
LSEM+TK+
Sbjct: 90 LSEMTTKV 97
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 1 HILSEMSTK 9
H+LSEM K
Sbjct: 400 HLLSEMLNK 408
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 1 HILSEMSTK 9
H+LSEM K
Sbjct: 404 HLLSEMLNK 412
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 HILSEM 6
H+LSEM
Sbjct: 315 HVLSEM 320
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 ILSEMST 8
+LS+MST
Sbjct: 674 VLSQMST 680
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 1 HILSEMSTK 9
H++SEM +K
Sbjct: 412 HLISEMLSK 420
76|SequenceR|385|376|YLKFHHILSE
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 2 LKFHHILSE 10
+++HH LSE
Sbjct: 1 MEYHHFLSE 9
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 FHHILSE 10
FH ILSE
Sbjct: 252 FHQILSE 258
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 FHHILSE 10
FH ILSE
Sbjct: 252 FHQILSE 258
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 FHHILSE 10
FH ILSE
Sbjct: 252 FHQILSE 258
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 FHHILSE 10
FH ILSE
Sbjct: 252 FHQILSE 258
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 FHHILSE 10
FH ILSE
Sbjct: 252 FHQILSE 258
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 YLKFHHI 7
Y+K+HH+
Sbjct: 348 YMKYHHL 354
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 1 YLKFHHI 7
Y+K+HH+
Sbjct: 348 YMKYHHL 354
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 YLKFHHILSE 10
+L +H++LS+
Sbjct: 67 WLMYHYVLSK 76
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain
Query: 1 YLKFHHILSE 10
+L +H++LS+
Sbjct: 67 WLMYHYVLSK 76
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 YLKFHHILSE 10
+L +H++LS+
Sbjct: 67 WLMYHYVLSK 76
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YLKFHHILSE 10
Y K HIL E
Sbjct: 398 YTKIKHILEE 407
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YLKFHHILSE 10
Y K HIL E
Sbjct: 398 YTKIKHILEE 407
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YLKFHHILSE 10
Y KF HIL +
Sbjct: 287 YDKFRHILMQ 296
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YLKFHHILSE 10
Y KF HIL +
Sbjct: 287 YDKFRHILMQ 296
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KFHHILSE 10
+ +HILSE
Sbjct: 569 ELNHILSE 576
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KFHHILSE 10
+ +HILSE
Sbjct: 849 ELNHILSE 856
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KFHHILSE 10
+ +HILSE
Sbjct: 849 ELNHILSE 856
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KFHHILSE 10
+ +HILSE
Sbjct: 849 ELNHILSE 856
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KFHHILSE 10
+ +HILSE
Sbjct: 849 ELNHILSE 856
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KFHHILSE 10
+ +HILSE
Sbjct: 849 ELNHILSE 856
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KFHHILSE 10
+ +HILSE
Sbjct: 849 ELNHILSE 856
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 KFHHILS 9
+FHH+ +
Sbjct: 471 EFHHVFA 477
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 1 YLKFH 5
Y+KFH
Sbjct: 170 YVKFH 174
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 2 LKFHHILS 9
+KF+HI++
Sbjct: 502 IKFNHIIT 509
77|SequenceR|390|381|QYGETYLKFH
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 QYGETY 6
QYGET+
Sbjct: 2798 QYGETW 2803
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 YGETYLKFH 10
YG + KFH
Sbjct: 1884 YGNLFSKFH 1892
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 QYGETYL 7
Q+GE YL
Sbjct: 806 QFGEEYL 812
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 QYGETYL 7
Q+GE YL
Sbjct: 807 QFGEEYL 813
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 QYGETYL 7
Q+G TYL
Sbjct: 1570 QFGPTYL 1576
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 QYGETYL 7
Q+G TYL
Sbjct: 1593 QFGPTYL 1599
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 QYGETY 6
QY ETY
Sbjct: 1870 QYAETY 1875
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 QYGETYL 7
Q+G TYL
Sbjct: 1570 QFGPTYL 1576
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 QYGETY 6
QY ETY
Sbjct: 1869 QYAETY 1874
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 QYGETY 6
QY ETY
Sbjct: 1869 QYAETY 1874
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 QYGETYL 7
Q+G TYL
Sbjct: 1593 QFGPTYL 1599
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 QYGETYLK 8
QY ET+ K
Sbjct: 2536 QYDETFWK 2543
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 YGETYL 7
YG TYL
Sbjct: 228 YGGTYL 233
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 2 YGETYL 7
YG TYL
Sbjct: 228 YGGTYL 233
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 YGETYL 7
YG TYL
Sbjct: 228 YGGTYL 233
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 YGETYL 7
YG TYL
Sbjct: 228 YGGTYL 233
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 2 YGETYLKF 9
+G+ YL F
Sbjct: 786 FGDNYLNF 793
78|SequenceR|395|386|AGPPVQYGET
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 AGPPVQYGE 9
+G PV +GE
Sbjct: 2007 SGAPVHFGE 2015
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 GPPVQYG 8
GPP++ G
Sbjct: 2023 GPPIKTG 2029
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 GPPVQYG 8
GPP++ G
Sbjct: 2023 GPPIKTG 2029
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 AGPPVQY 7
+ PP QY
Sbjct: 1808 SAPPAQY 1814
Query: 2 GPPVQYGET 10
G P+++G T
Sbjct: 957 GKPLEFGAT 965
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 AGPPVQY 7
+ PP QY
Sbjct: 1808 SAPPAQY 1814
Query: 2 GPPVQYGET 10
G P+++G T
Sbjct: 957 GKPLEFGAT 965
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 PPVQYGET 10
P V YG T
Sbjct: 2956 PTVSYGST 2963
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 PPVQYGET 10
P V YG T
Sbjct: 2956 PTVSYGST 2963
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 GPPVQYGE 9
G P+QYG
Sbjct: 2094 GNPLQYGS 2101
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 4 PVQYGE 9
P+QY E
Sbjct: 97 PIQYSE 102
79|SequenceR|400|391|IATYTAGPPV
>sp|GLRX2_VACCC|GLUTAREDOXIN-2 virus (strain Copenhagen) (VACV)
Query: 2 ATYTAGPPV 10
ATY PPV
Sbjct: 114 ATYGVWPPV 122
>sp|GLRX2_MONPV|GLUTAREDOXIN-2 virus (MPXV)
Query: 2 ATYTAGPPV 10
ATY PPV
Sbjct: 114 ATYGVWPPV 122
>sp|GLRX2_CWPXB|GLUTAREDOXIN-2 virus (strain Brighton Red)
Query: 2 ATYTAGPPV 10
ATY PPV
Sbjct: 114 ATYGVWPPV 122
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IATYTAGPP 9
++TYTA PP
Sbjct: 165 LSTYTADPP 173
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 1 IATYTAGPP 9
++TYTA PP
Sbjct: 165 LSTYTADPP 173
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 1 IATYTAGPP 9
++TYTA PP
Sbjct: 132 LSTYTADPP 140
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 3 TYTAGPP 9
T++AGPP
Sbjct: 431 TWSAGPP 437
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 3 TYTAGPP 9
T++AGPP
Sbjct: 431 TWSAGPP 437
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 TYTAGPP 9
T TAGPP
Sbjct: 65 TGTAGPP 71
>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 4 YTAGPPV 10
YTAGP V
Sbjct: 137 YTAGPGV 143
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 IATYTAGPP 9
I TY PP
Sbjct: 743 ICTYRHAPP 751
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 IATYTAGPP 9
I TY PP
Sbjct: 743 ICTYRHAPP 751
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 IATYTAGPP 9
I TY PP
Sbjct: 743 ICTYRHAPP 751
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 4 YTAGPPV 10
YT+GP V
Sbjct: 159 YTSGPGV 165
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 IATYTAGP 8
+AT+ AGP
Sbjct: 1824 VATHLAGP 1831
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 IATYTAGP 8
+AT+ AGP
Sbjct: 1822 VATHLAGP 1829
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 IATYTAGP 8
+AT+ AGP
Sbjct: 1822 VATHLAGP 1829
80|SequenceR|405|396|GKPAEIATYT
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 KPAEIATYT 10
KPA++AT T
Sbjct: 230 KPAKVATRT 238
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 KPAEIATYT 10
KPA++AT T
Sbjct: 230 KPAKVATRT 238
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GKPAEIATY 9
G PA + TY
Sbjct: 219 GTPAPLNTY 227
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 PAEIATYT 10
PA+ TYT
Sbjct: 1355 PAQYLTYT 1362
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 PAEIATYT 10
PA+ TYT
Sbjct: 1355 PAQYLTYT 1362
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 PAEIATYT 10
PA+ TYT
Sbjct: 1357 PAQYLTYT 1364
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 PAEIATYT 10
PA+ TYT
Sbjct: 1357 PAQYLTYT 1364
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 PAEIATYT 10
PA+ TYT
Sbjct: 1356 PAQYLTYT 1363
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 PAEIATYT 10
PA+ TYT
Sbjct: 1356 PAQYLTYT 1363
81|SequenceR|410|401|YVGFEGKPAE
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 GFEGKP 8
GF+GKP
Sbjct: 121 GFDGKP 126
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 GFEGKP 8
GF+GKP
Sbjct: 121 GFDGKP 126
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 YVGFEGK 7
Y GF+GK
Sbjct: 3520 YTGFQGK 3526
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 YVGFEGK 7
Y GF+GK
Sbjct: 3520 YTGFQGK 3526
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 3 GFEGKP 8
GFEG+P
Sbjct: 430 GFEGRP 435
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 GFEGKP 8
GFEG+P
Sbjct: 430 GFEGRP 435
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YVGFEGKPAE 10
+VGFE AE
Sbjct: 204 HVGFEATAAE 213
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 3 GFEGKP 8
GFEG+P
Sbjct: 430 GFEGRP 435
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 YVGFEGK 7
YVG+ GK
Sbjct: 126 YVGYNGK 132
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 1 YVGFEGK 7
YVG+ GK
Sbjct: 126 YVGYNGK 132
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 1 YVGFEGK 7
YVG+ GK
Sbjct: 126 YVGYNGK 132
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 1 YVGFEGK 7
YVG+ GK
Sbjct: 126 YVGYNGK 132
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 1 YVGFEGK 7
YVG+ GK
Sbjct: 126 YVGYNGK 132
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 1 YVGFEGK 7
YVG+ GK
Sbjct: 126 YVGYNGK 132
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 1 YVGFEGK 7
YVG+ GK
Sbjct: 126 YVGYNGK 132
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 YVGFEGK 7
Y+GF+G+
Sbjct: 3554 YMGFQGR 3560
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 YVGFEGK 7
Y+GF+G+
Sbjct: 3574 YMGFQGR 3580
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 YVGFEGK 7
Y+GF+G+
Sbjct: 3604 YMGFQGR 3610
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 YVGFEGK 7
Y+GF+G+
Sbjct: 3554 YMGFQGR 3560
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 YVGFEGK 7
Y+GF+G+
Sbjct: 3574 YMGFQGR 3580
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 YVGFEGK 7
Y+GF+G+
Sbjct: 3604 YMGFQGR 3610
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 YVGFEGKPA 9
++ EGKPA
Sbjct: 1691 HIELEGKPA 1699
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 1 YVGFEGKPAE 10
Y F G+P E
Sbjct: 119 YFKFTGQPPE 128
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 1 YVGFEGKPAE 10
Y F G+P E
Sbjct: 119 YFKFTGQPPE 128
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 VGFEGKPA 9
VGF G+PA
Sbjct: 142 VGFFGEPA 149
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 3 GFEGKP 8
G+EG+P
Sbjct: 430 GYEGRP 435
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 VGFEGKP 8
V FEG P
Sbjct: 2019 VSFEGPP 2025
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 VGFEGKP 8
V FEG P
Sbjct: 2019 VSFEGPP 2025
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 GFEGKP 8
G+EG+P
Sbjct: 430 GYEGRP 435
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 VGFEGKPA 9
+G E KPA
Sbjct: 1450 IGLEEKPA 1457
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 GFEGKPAE 10
GF+ PAE
Sbjct: 2634 GFQYSPAE 2641
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 GFEGKPAE 10
GF+ PAE
Sbjct: 2634 GFQYSPAE 2641
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 FEGKPAE 10
++GKP E
Sbjct: 955 YQGKPLE 961
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 FEGKPAE 10
++GKP E
Sbjct: 955 YQGKPLE 961
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 5 EGKPAE 10
EG PAE
Sbjct: 589 EGNPAE 594
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 VGFEGKP 8
+ +EGKP
Sbjct: 1103 IRYEGKP 1109
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 YVGFEGKP 8
Y G+ G+P
Sbjct: 1426 YDGYSGQP 1433
82|SequenceR|415|406|GDSVLYVGFE
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 659 GDNIIYVG 666
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 659 GDNIIYVG 666
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 659 GDNIIYVG 666
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 658 GDNIIYVG 665
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 659 GDNIIYVG 666
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 659 GDNIIYVG 666
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 659 GDNIIYVG 666
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 659 GDNIIYVG 666
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 659 GDNIIYVG 666
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 660 GDNIIYVG 667
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 660 GDNIIYVG 667
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 379 GDNIIYVG 386
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 379 GDNIIYVG 386
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 379 GDNIIYVG 386
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 1 GDSVLYVG 8
GD+++YVG
Sbjct: 379 GDNIIYVG 386
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 DSVLYVGFE 10
D V+Y GFE
Sbjct: 3142 DGVMYGGFE 3150
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 GDSVLYVG 8
GD VL+VG
Sbjct: 171 GDRVLWVG 178
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 1 GDSVLY 6
GDSVLY
Sbjct: 102 GDSVLY 107
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 GDSVLY 6
GDSVLY
Sbjct: 102 GDSVLY 107
>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GDSVLY 6
GDSVLY
Sbjct: 102 GDSVLY 107
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SVLYVGFE 10
SV+Y GF+
Sbjct: 198 SVIYSGFQ 205
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SVLYVGFE 10
SV+Y GF+
Sbjct: 198 SVIYSGFQ 205
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 GDSVLYVGFE 10
GDS + +G E
Sbjct: 374 GDSYIIIGIE 383
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 DSVLYVGFE 10
D V+Y GFE
Sbjct: 3142 DGVMYGGFE 3150
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 1 GDSVLYV 7
GD+ LYV
Sbjct: 228 GDTALYV 234
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GDSVLYV 7
GD+ LYV
Sbjct: 228 GDTALYV 234
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 1 GDSVLYV 7
GD+ LYV
Sbjct: 228 GDTALYV 234
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 1 GDSVLYV 7
GD+ LYV
Sbjct: 228 GDTALYV 234
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GDSVLYV 7
GD+ LYV
Sbjct: 228 GDTALYV 234
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GDSVLYVG 8
GD+V+Y G
Sbjct: 5507 GDAVVYRG 5514
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 1 GDSVLY 6
GD+VLY
Sbjct: 158 GDAVLY 163
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GDSVLYVG 8
GD+V+Y G
Sbjct: 5530 GDAVVYRG 5537
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 GDSVLYVGFE 10
GD+ L V FE
Sbjct: 1767 GDTRLKVNFE 1776
>sp|VEGFH_ORFN7|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ7) (OV
Query: 2 DSVLYVGFE 10
D+V+Y+G E
Sbjct: 50 DTVVYLGEE 58
>sp|NS4B_CVH22|NON-STRUCTURAL protein 4b|Human coronavirus 229E (HCoV-229E)
Query: 1 GDSVLYVG 8
GD LY+G
Sbjct: 22 GDQFLYIG 29
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 2 DSVLYV 7
DSVLY+
Sbjct: 334 DSVLYI 339
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 GDSVLYVG 8
GD + Y+G
Sbjct: 1188 GDGIPYIG 1195
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 GDSVLYVG 8
GD + Y+G
Sbjct: 1188 GDGIPYIG 1195
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 GDSVLYVG 8
GD + Y+G
Sbjct: 1187 GDGIPYIG 1194
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 GDSVLYVG 8
GD + Y+G
Sbjct: 1187 GDGIPYIG 1194
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 1 GDSVLYV 7
GD V+Y+
Sbjct: 922 GDRVMYI 928
>sp|YVEB_VACCC|UNCHARACTERIZED 11.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 VLYVGF 9
+LY+GF
Sbjct: 66 ILYMGF 71
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 GDSVLYV 7
GD ++YV
Sbjct: 923 GDRIMYV 929
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 GDSVLYV 7
GD ++YV
Sbjct: 923 GDRIMYV 929
83|SequenceR|420|411|YPRSSGDSVL
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PRSSGDSV 9
PR+ GD++
Sbjct: 496 PRAGGDTI 503
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 3 RSSGDSV 9
RS+GDS+
Sbjct: 27 RSTGDSI 33
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 3 RSSGDSV 9
RS+GDS+
Sbjct: 27 RSTGDSI 33
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 2 PRSSGDSVL 10
P GDS+L
Sbjct: 51 PEMPGDSIL 59
>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United
Query: 2 PRSSGDSVL 10
P GDSVL
Sbjct: 51 PEIPGDSVL 59
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 2 PRSSGDSV 9
P+SSG+ V
Sbjct: 53 PKSSGNKV 60
84|SequenceR|425|416|KIKCRYPRSS
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 1 KIKCRYPRSS 10
+I+CR+P S+
Sbjct: 110 QIRCRFPNST 119
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 1 KIKCRYPRSS 10
+I+CR+P S+
Sbjct: 110 QIRCRFPNST 119
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 1 KIKCRYPRSS 10
+I+CR+P S+
Sbjct: 109 QIRCRFPNST 118
>sp|EV45_HHV2H|ENVELOPE protein UL45|Human herpesvirus 2 (strain HG52)
Query: 4 CRYPRS 9
C YPRS
Sbjct: 149 CYYPRS 154
>sp|EV45_HHV23|ENVELOPE protein UL45|Human herpesvirus 2 (strain 333)
Query: 4 CRYPRS 9
C YPRS
Sbjct: 149 CYYPRS 154
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 KIKCRYPRS 9
K KC PRS
Sbjct: 1215 KSKCSVPRS 1223
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KIKCRY 6
+IKCRY
Sbjct: 278 EIKCRY 283
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KIKCRY 6
+IKCRY
Sbjct: 278 EIKCRY 283
>sp|EV45_HHV1K|ENVELOPE protein UL45|Human herpesvirus 1 (strain KOS)
Query: 4 CRYPRS 9
C YPRS
Sbjct: 149 CYYPRS 154
>sp|EV45_HHV1M|ENVELOPE protein UL45|Human herpesvirus 1 (strain MP)
Query: 4 CRYPRS 9
C YPRS
Sbjct: 149 CYYPRS 154
>sp|EV45_HHV11|ENVELOPE protein UL45|Human herpesvirus 1 (strain 17)
Query: 4 CRYPRS 9
C YPRS
Sbjct: 149 CYYPRS 154
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 4 CRYPRS 9
C YP+S
Sbjct: 1056 CNYPKS 1061
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 CRYPRS 9
C YP+S
Sbjct: 1056 CNYPKS 1061
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 4 CRYPRS 9
C YP+S
Sbjct: 1056 CNYPKS 1061
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 CRYPRS 9
C YP+S
Sbjct: 1056 CNYPKS 1061
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8])
Query: 4 CRYPRS 9
C YP+S
Sbjct: 1056 CNYPKS 1061
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 4 CRYPRS 9
C YP+S
Sbjct: 1056 CNYPKS 1061
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 4 CRYPRS 9
C YP+S
Sbjct: 1056 CNYPKS 1061
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 4 CRYPRS 9
C YP+S
Sbjct: 1056 CNYPKS 1061
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 4 CRYPRS 9
C YP+S
Sbjct: 1056 CNYPKS 1061
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 CRYPRS 9
C YP+S
Sbjct: 1056 CNYPKS 1061
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 4 CRYPRS 9
C YP+S
Sbjct: 1056 CNYPKS 1061
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 4 CRYPRS 9
C YP+S
Sbjct: 1056 CNYPKS 1061
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 CRYPRS 9
C YP+S
Sbjct: 1056 CNYPKS 1061
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 CRYPRS 9
C YP+S
Sbjct: 1056 CNYPKS 1061
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 IKCRYPR 8
++CR PR
Sbjct: 216 LQCRAPR 222
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 IKCRYPR 8
++CR PR
Sbjct: 216 LQCRAPR 222
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 IKCRYPR 8
++CR PR
Sbjct: 216 LQCRAPR 222
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 IKCRYPR 8
++CR PR
Sbjct: 216 LQCRAPR 222
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 4 CRYPRS 9
C+YPR+
Sbjct: 135 CKYPRA 140
>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)
Query: 2 IKCRYPRS 9
I CRY S
Sbjct: 104 ISCRYKHS 111
>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 IKCRYPRS 9
I CRY S
Sbjct: 104 ISCRYKHS 111
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 4 CRYPRS 9
C+YPR+
Sbjct: 135 CKYPRA 140
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 IKCRYPR 8
++CR PR
Sbjct: 217 LQCRAPR 223
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 IKCRYPR 8
++CR PR
Sbjct: 217 LQCRAPR 223
>sp|TEG6_HHV1E|TEGUMENT protein UL55|Human herpesvirus 1 (strain HFEM)
Query: 4 CRYPRS 9
CRYP S
Sbjct: 143 CRYPFS 148
>sp|TEG6_HHV2H|TEGUMENT protein UL55|Human herpesvirus 2 (strain HG52)
Query: 4 CRYPRS 9
CRYP S
Sbjct: 141 CRYPFS 146
>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 4 CRYPRS 9
C YPR+
Sbjct: 135 CNYPRA 140
85|SequenceR|430|421|AFGPAKIKCR
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 FGPAKIKC 9
F PAK++C
Sbjct: 1990 FCPAKLRC 1997
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 FGPAKIKC 9
F PAK++C
Sbjct: 2033 FCPAKLRC 2040
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 FGPAKIKC 9
F PAK++C
Sbjct: 2020 FCPAKLRC 2027
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 FGPAKIKC 9
F PAK++C
Sbjct: 2020 FCPAKLRC 2027
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAKIKC 9
GP +IKC
Sbjct: 380 GPRRIKC 386
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 FGPAKIKC 9
F PAK++C
Sbjct: 1982 FCPAKLRC 1989
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 FGPAKIKC 9
F PAK++C
Sbjct: 702 FCPAKLRC 709
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 2 FGPAKIKC 9
F PA+I C
Sbjct: 28 FSPAEITC 35
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAKIKC 9
GP +IKC
Sbjct: 380 GPRRIKC 386
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 AFGPAKI 7
A GPAKI
Sbjct: 648 AHGPAKI 654
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 3 GPAKIKC 9
GP ++KC
Sbjct: 323 GPNQLKC 329
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate
Query: 3 GPAKIKCR 10
PA KCR
Sbjct: 7 APAGAKCR 14
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 FGPAKIKC 9
+GP + KC
Sbjct: 2013 YGPEQDKC 2020
>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GPAKIKC 9
GPA + C
Sbjct: 91 GPAPLSC 97
>sp|UL06_HCMVA|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GPAKIKC 9
GPA + C
Sbjct: 95 GPAPLSC 101
>sp|PG122_VAR67|MRNA-DECAPPING protein OPG122|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 AFGPAKIKC 9
A AK+KC
Sbjct: 222 ALDTAKLKC 230
>sp|PG122_VACCC|MRNA-DECAPPING protein OPG122|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 AFGPAKIKC 9
A AK+KC
Sbjct: 222 ALDTAKLKC 230
>sp|PG122_MONPV|MRNA-DECAPPING protein OPG122|Monkeypox virus (MPXV)
Query: 1 AFGPAKIKC 9
A AK+KC
Sbjct: 222 ALDTAKLKC 230
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 2 FGPAKIKC 9
F P +KC
Sbjct: 405 FNPGAVKC 412
86|SequenceR|435|426|LGALHAFGPA
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 LGALHAFGP 9
+ +HA GP
Sbjct: 63 MNVIHAVGP 71
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 LGALHAFGP 9
+ +HA GP
Sbjct: 1394 MNVIHAVGP 1402
>sp|UL63_HCMVA|UNCHARACTERIZED protein UL63|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LGALHAFG 8
+G LH FG
Sbjct: 44 VGDLHLFG 51
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 LHAFGPA 10
LH F PA
Sbjct: 2132 LHRFAPA 2138
87|SequenceR|440|431|KSMKDLGALH
>sp|VE2_HPV1|REGULATORY protein E2|Human papillomavirus type 1 (Human
Query: 2 SMKDLGALH 10
S +D+G++H
Sbjct: 289 SARDVGSIH 297
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 MKDLGALH 10
+ DLG LH
Sbjct: 38 LDDLGPLH 45
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 MKDLGALH 10
+ DLG LH
Sbjct: 38 LDDLGPLH 45
88|SequenceR|445|436|ALMHGKSMKD
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LMHGKSMK 9
L+H K+MK
Sbjct: 322 LLHRKTMK 329
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LMHGKSMK 9
L+H K+MK
Sbjct: 322 LLHRKTMK 329
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 LMHGKSMKD 10
++HGK + D
Sbjct: 2212 VLHGKEIYD 2220
89|SequenceR|450|441|IAVVDALMHG
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 2 AVVDALMHG 10
A+ DAL HG
Sbjct: 126 ALQDALAHG 134
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 VVDALMHG 10
+VD L+HG
Sbjct: 612 LVDVLVHG 619
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VVDALMHG 10
+VD L+HG
Sbjct: 612 LVDVLVHG 619
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 VVDALMH 9
VVDAL H
Sbjct: 1006 VVDALRH 1012
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 VDALMH 9
VDA+MH
Sbjct: 1797 VDAVMH 1802
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 VDALMH 9
VDA+MH
Sbjct: 1817 VDAVMH 1822
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 VDALMH 9
VDA+MH
Sbjct: 1847 VDAVMH 1852
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 IAVVDALMH 9
IAV+ A+M+
Sbjct: 2204 IAVISAMMY 2212
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 VDALMH 9
VDA+MH
Sbjct: 1797 VDAVMH 1802
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 VDALMH 9
VDA+MH
Sbjct: 1847 VDAVMH 1852
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 VDALMH 9
VDA+MH
Sbjct: 1817 VDAVMH 1822
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 3 VVDALMH 9
V+DAL H
Sbjct: 1005 VIDALRH 1011
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 IAVVDALMH 9
IA++ A+M+
Sbjct: 2200 IAIISAMMY 2208
90|SequenceR|455|446|DQTGIIAVVD
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 QTGIIAVV 9
++GIIAVV
Sbjct: 269 RSGIIAVV 276
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 QTGIIAVV 9
++GIIAVV
Sbjct: 269 RSGIIAVV 276
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 QTGIIAVV 9
++GIIAVV
Sbjct: 269 RSGIIAVV 276
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 GIIAVVD 10
GI+AV+D
Sbjct: 862 GILAVID 868
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 DQTGII 6
DQTGI+
Sbjct: 540 DQTGIL 545
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 DQTGII 6
DQTGI+
Sbjct: 540 DQTGIL 545
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 GIIAVVD 10
GI+AV+D
Sbjct: 862 GILAVID 868
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 1 DQTGIIAVVD 10
+Q GI+ V+D
Sbjct: 213 EQKGILPVLD 222
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 DQTGIIAVVD 10
+ GI+ VVD
Sbjct: 731 NSNGIVVVVD 740
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 1 DQTGIIAVVD 10
+Q GI+ V+D
Sbjct: 213 EQKGILPVLD 222
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 QTGIIA 7
QTG+IA
Sbjct: 401 QTGVIA 406
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 DQTGII 6
DQTG++
Sbjct: 539 DQTGVL 544
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 DQTGII 6
DQTG++
Sbjct: 539 DQTGVL 544
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 DQTGII 6
DQTG++
Sbjct: 539 DQTGVL 544
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 DQTGII 6
DQTG++
Sbjct: 539 DQTGVL 544
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 DQTGII 6
DQTG++
Sbjct: 539 DQTGVL 544
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 DQTGII 6
DQTG++
Sbjct: 539 DQTGVL 544
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 DQTGII 6
DQTG++
Sbjct: 539 DQTGVL 544
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 1 DQTGII 6
DQTG++
Sbjct: 259 DQTGVL 264
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 1 DQTGII 6
DQTG++
Sbjct: 259 DQTGVL 264
91|SequenceR|463|451|RDVEGFVIDQTGI
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 4 EGFVIDQTGI 13
EG +ID G+
Sbjct: 100 EGLIIDGGGV 109
>sp|TEG3_VZVO|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RDVEGFVIDQTGI 13
RD++ V +QT I
Sbjct: 79 RDIQSKVEEQTSI 91
>sp|TEG3_VZVD|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 RDVEGFVIDQTGI 13
RD++ V +QT I
Sbjct: 79 RDIQSKVEEQTSI 91
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 RDVEGFV 7
RD+ GF+
Sbjct: 1620 RDIRGFI 1626
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 RDVEGFV 7
RD+ GF+
Sbjct: 1621 RDIRGFI 1627
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 RDVEGFVIDQTG 12
RDV+ F++ +G
Sbjct: 2099 RDVKDFILYASG 2110
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 RDVEGFVI 8
++VEGF++
Sbjct: 333 KEVEGFIM 340
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 RDVEGFVI 8
++VEGF++
Sbjct: 333 KEVEGFIM 340
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 RDVEGFVI 8
++VEGF++
Sbjct: 333 KEVEGFIM 340
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 RDVEGFVIDQTG 12
RDV+ F++ +G
Sbjct: 2099 RDVKDFILYASG 2110
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RDVEGFV 7
RD+ GFV
Sbjct: 315 RDLRGFV 321
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RDVEGFV 7
RD+ GFV
Sbjct: 314 RDLRGFV 320
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RDVEGFV 7
RD+ GFV
Sbjct: 315 RDLRGFV 321
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 RDVEGFVIDQTG 12
+ V FVI +TG
Sbjct: 188 KTVREFVISRTG 199
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 4 EGFVIDQTGI 13
EG+V +TG+
Sbjct: 73 EGYVCAKTGL 82
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 EGFVIDQTGI 13
EG+V +TG+
Sbjct: 71 EGYVCAKTGL 80
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 4 EGFVIDQ 10
EG ++DQ
Sbjct: 249 EGIIVDQ 255
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 RDVEGFVID 9
+D+E VID
Sbjct: 469 KDIESAVID 477
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DVEGFVIDQTGI 13
D+ VID TGI
Sbjct: 518 DLNHEVIDLTGI 529
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 RDVEGFVIDQTGI 13
R++ GF+ +GI
Sbjct: 869 REIHGFLAIVSGI 881
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 2 DVEGFVID 9
DV+ F++D
Sbjct: 800 DVKSFILD 807
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 6 FVIDQTGI 13
++D+TG+
Sbjct: 1525 LIVDETGV 1532
THE END