1|Sequence|1|10|MAALRALCGF
>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)
Query: 1 MAALRALC 8
MAAL A+C
Sbjct: 239 MAALMAIC 246
>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 MAALRALC 8
MAAL A+C
Sbjct: 239 MAALMAIC 246
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 AALRALC 8
AALR LC
Sbjct: 1092 AALRNLC 1098
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 AALRALC 8
AALR LC
Sbjct: 1089 AALRNLC 1095
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 AALRALC 8
AALR LC
Sbjct: 1088 AALRNLC 1094
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 AALRALC 8
AALR LC
Sbjct: 1078 AALRNLC 1084
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 AALRALC 8
AALR LC
Sbjct: 1088 AALRNLC 1094
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 5 RALCG 9
RALCG
Sbjct: 17 RALCG 21
>sp|TEG6_VZVO|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 MAALRALCG 9
+ ALRA CG
Sbjct: 58 LCALRATCG 66
>sp|TEG6_VZVD|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 MAALRALCG 9
+ ALRA CG
Sbjct: 58 LCALRATCG 66
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 MAALRALC 8
MAAL A C
Sbjct: 1672 MAALTAYC 1679
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 2 AALRALCG 9
AAL LCG
Sbjct: 454 AALLDLCG 461
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 2 AALRALCG 9
AAL LCG
Sbjct: 438 AALLDLCG 445
2|Sequence|6|15|ALCGFRGVAA
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 2 LCGFRGVA 9
LC RGVA
Sbjct: 58 LCKLRGVA 65
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 ALCGFRGVAA 10
A+ GF GVA+
Sbjct: 686 AVYGFTGVAS 695
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 2 LCGFRG 7
+CGF G
Sbjct: 461 ICGFHG 466
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 2 LCGFRG 7
+C FRG
Sbjct: 283 ICNFRG 288
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 3 CGFRGV 8
CG RGV
Sbjct: 159 CGSRGV 164
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 LCGFRG 7
LCG RG
Sbjct: 223 LCGLRG 228
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 ALCGFRGVA 9
+CG R V+
Sbjct: 846 GICGLRSVS 854
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 ALCGFRGVA 9
+CG R V+
Sbjct: 841 GICGIRSVS 849
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 2 LCGFRGVA 9
LC GVA
Sbjct: 58 LCSLNGVA 65
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 LCGFR 6
LCG+R
Sbjct: 2690 LCGYR 2694
3|Sequence|11|20|RGVAAQVLRP
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 VAAQVLRP 10
VAA++LRP
Sbjct: 2267 VAAEILRP 2274
4|Sequence|16|25|QVLRPGAGVR
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 QVLRPGAGV 9
+V+RPG GV
Sbjct: 3087 KVMRPGKGV 3095
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
+V RPG G
Sbjct: 464 EVFRPGGG 471
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
+V RPG G
Sbjct: 464 EVFRPGGG 471
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
+ LRPG G
Sbjct: 468 ETLRPGGG 475
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
+ LRPG G
Sbjct: 460 ETLRPGGG 467
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 QVLRPGAG 8
+V+RPG G
Sbjct: 3079 KVMRPGPG 3086
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 453 EIFRPGGG 460
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 465 EIFRPGGG 472
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 465 EIFRPGGG 472
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 457 EIFRPGGG 464
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 468 EIFRPGGG 475
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 466 EIFRPGGG 473
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 472 EIFRPGGG 479
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 458 EIFRPGGG 465
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 466 EIFRPGGG 473
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 466 EIFRPGGG 473
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 477 EIFRPGGG 484
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 471 EIFRPGGG 478
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 462 EIFRPGGG 469
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 461 EIFRPGGG 468
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 466 EIFRPGGG 473
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 456 EIFRPGGG 463
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
++ RPG G
Sbjct: 463 EIFRPGGG 470
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 QVLRPGAG 8
+V+RPG G
Sbjct: 3103 KVMRPGPG 3110
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 QVLRPGAG 8
+V+RP AG
Sbjct: 3110 KVMRPAAG 3117
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1697 LHPGAG 1702
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 QVLRPGAG 8
+V+RP AG
Sbjct: 3108 KVMRPAAG 3115
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVLRPGAG 8
+ +RPG G
Sbjct: 456 ETIRPGGG 463
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 VLRPGAGVR 10
V +PGAG R
Sbjct: 67 VSQPGAGTR 75
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 4 RPGAGVR 10
RPG G R
Sbjct: 66 RPGNGTR 72
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 RPGAGV 9
+PGAGV
Sbjct: 1355 QPGAGV 1360
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 RPGAGV 9
+PGAGV
Sbjct: 1355 QPGAGV 1360
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 VLRPGAGVR 10
V +PGAG R
Sbjct: 67 VSQPGAGAR 75
>sp|NEF_HV1S3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 QVLRPGAGVR 10
Q PG GVR
Sbjct: 124 QNYTPGPGVR 133
>sp|US01_HCMVA|UNCHARACTERIZED protein HQLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LRPGAG 8
LRPG+G
Sbjct: 52 LRPGSG 57
>sp|US01_HCMVM|PROTEIN US1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LRPGAG 8
LRPG+G
Sbjct: 52 LRPGSG 57
>sp|CORE5_ADE40|CORE-CAPSID bridging protein|Human adenovirus F serotype 40
Query: 1 QVLRPGAGV 9
+VLRPG V
Sbjct: 77 RVLRPGTTV 85
>sp|CORE5_ADE02|CORE-CAPSID bridging protein|Human adenovirus C serotype 2
Query: 1 QVLRPGAGV 9
+VLRPG V
Sbjct: 74 RVLRPGTTV 82
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 1 QVLRPGAGVR 10
Q+LR G++
Sbjct: 118 QILRKSGGIK 127
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 1 QVLRPGAGVR 10
Q+LR G++
Sbjct: 118 QILRKSGGIK 127
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 1 QVLRPGAGVR 10
Q+LR G++
Sbjct: 118 QILRKSGGIK 127
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 1 QVLRPGAGVR 10
Q+LR G++
Sbjct: 118 QILRKSGGIK 127
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 1 QVLRPGAGVR 10
Q+LR G++
Sbjct: 118 QILRKSGGIK 127
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 1 QVLRPGAGVR 10
Q+LR G++
Sbjct: 118 QILRKSGGIK 127
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 1 QVLRPGAGVR 10
Q+LR G++
Sbjct: 118 QILRKSGGIK 127
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 1 QVLRPGAGVR 10
Q+LR G++
Sbjct: 118 QILRKSGGIK 127
>sp|CORE5_ADE05|CORE-CAPSID bridging protein|Human adenovirus C serotype 5
Query: 1 QVLRPGAGV 9
+VLRPG V
Sbjct: 73 RVLRPGTTV 81
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 5 PGAGV 9
PGAGV
Sbjct: 467 PGAGV 471
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 5 PGAGV 9
PGAGV
Sbjct: 467 PGAGV 471
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 5 PGAGV 9
PGAGV
Sbjct: 470 PGAGV 474
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 5 PGAGV 9
PGAGV
Sbjct: 469 PGAGV 473
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 VLRPGAGV 9
+ +PG+GV
Sbjct: 4602 ITQPGSGV 4609
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 QVLRPGAGVR 10
Q PG GVR
Sbjct: 125 QNYTPGPGVR 134
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PGAGVR 10
PGAG+R
Sbjct: 951 PGAGLR 956
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PGAGVR 10
PGAG+R
Sbjct: 951 PGAGLR 956
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PGAGVR 10
PGAG+R
Sbjct: 951 PGAGLR 956
>sp|CORE5_ADE12|CORE-CAPSID bridging protein|Human adenovirus A serotype 12
Query: 1 QVLRPGAGV 9
++LRPG V
Sbjct: 75 RILRPGTTV 83
>sp|NEF_HV192|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 QVLRPGAGVR 10
Q PG GVR
Sbjct: 125 QNYTPGPGVR 134
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 QVLRPGAGVR 10
Q PG GVR
Sbjct: 126 QNYTPGPGVR 135
>sp|NEF_HV1H2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 QVLRPGAGVR 10
Q PG GVR
Sbjct: 125 QNYTPGPGVR 134
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 3 LRPGAGVR 10
++PG G+R
Sbjct: 242 VKPGRGLR 249
>sp|NEF_HV1BR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 QVLRPGAGVR 10
Q PG GVR
Sbjct: 125 QNYTPGPGVR 134
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1668 LHPGAG 1673
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1668 LHPGAG 1673
>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 QVLRPGAGVR 10
Q PG GVR
Sbjct: 126 QNYTPGPGVR 135
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1668 LHPGAG 1673
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1668 LHPGAG 1673
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1668 LHPGAG 1673
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1668 LHPGAG 1673
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1668 LHPGAG 1673
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1667 LHPGAG 1672
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1667 LHPGAG 1672
>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 QVLRPGAGVR 10
Q PG GVR
Sbjct: 137 QNYTPGPGVR 146
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1667 LHPGAG 1672
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1667 LHPGAG 1672
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1258 LHPGAG 1263
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1667 LHPGAG 1672
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1695 LHPGAG 1700
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1693 LHPGAG 1698
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 LRPGAG 8
L PGAG
Sbjct: 1691 LHPGAG 1696
5|Sequence|21|30|GAGVRLPIQP
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GAGVRLP 7
GAG++LP
Sbjct: 6459 GAGIKLP 6465
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GAGVRLP 7
GAG++LP
Sbjct: 6488 GAGLKLP 6494
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 4 VRLPIQP 10
VR PI P
Sbjct: 897 VRFPINP 903
>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GAGVRLPI 8
G GVR P+
Sbjct: 140 GPGVRFPL 147
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 VRLPIQP 10
+RLP QP
Sbjct: 802 LRLPFQP 808
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 VRLPIQP 10
+RLP QP
Sbjct: 802 LRLPFQP 808
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 4 VRLPIQP 10
+RLP QP
Sbjct: 802 LRLPFQP 808
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 VRLPIQP 10
+RLP QP
Sbjct: 804 LRLPFQP 810
>sp|NEF_HV1S3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GAGVRLPI 8
G GVR P+
Sbjct: 129 GPGVRFPL 136
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 4 VRLPIQP 10
+RLP QP
Sbjct: 802 LRLPFQP 808
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 VRLPIQP 10
+RLP QP
Sbjct: 802 LRLPFQP 808
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 4 VRLPIQP 10
+RLP QP
Sbjct: 802 LRLPFQP 808
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 5 RLPIQP 10
RLPI P
Sbjct: 557 RLPISP 562
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 VRLPIQP 10
+RLP QP
Sbjct: 804 LRLPFQP 810
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 VRLPIQP 10
+RLP QP
Sbjct: 797 LRLPFQP 803
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 4 VRLPIQP 10
+RLP QP
Sbjct: 801 LRLPFQP 807
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 4 VRLPIQP 10
+RLP QP
Sbjct: 801 LRLPFQP 807
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 4 VRLPIQP 10
+RLP QP
Sbjct: 801 LRLPFQP 807
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 VRLPIQP 10
+RLP QP
Sbjct: 804 LRLPFQP 810
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GAGVRLPIQP 10
G GVR P P
Sbjct: 580 GLGVRAPRLP 589
>sp|NEF_HV192|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GAGVRLPI 8
G GVR P+
Sbjct: 130 GPGVRFPL 137
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GAGVRLPIQP 10
G GVR P P
Sbjct: 580 GLGVRAPRLP 589
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GAGVRLPI 8
G G RLP+
Sbjct: 131 GPGTRLPL 138
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 GAGVRLPI 8
G GVR P+
Sbjct: 162 GPGVRYPM 169
>sp|NEF_HV2BE|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 GAGVRLPI 8
G GVR P+
Sbjct: 162 GPGVRYPM 169
>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GAGVRLPI 8
G GVR P+
Sbjct: 131 GPGVRYPL 138
>sp|NP_ADE40|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus F serotype 40
Query: 1 GAGVRLPIQ 9
+GVR+P++
Sbjct: 171 ASGVRVPVR 179
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GAGVRLPI 8
G GVR P+
Sbjct: 130 GPGVRYPL 137
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 VRLPIQP 10
+RLP QP
Sbjct: 802 LRLPYQP 808
>sp|NEF_HV1YF|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GAGVRLPI 8
G G+R P+
Sbjct: 136 GPGIRYPV 143
>sp|NEF_HV2G1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 GAGVRLPI 8
G GVR P+
Sbjct: 161 GPGVRYPM 168
>sp|NEF_HV1H2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GAGVRLPI 8
G GVR P+
Sbjct: 130 GPGVRYPL 137
>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GAGVRLPI 8
G GVR P+
Sbjct: 142 GPGVRYPL 149
6|Sequence|26|35|LPIQPSRGVR
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 PIQPSR 7
P+QPSR
Sbjct: 1850 PLQPSR 1855
Query: 4 QPSRGVR 10
+PS+G+R
Sbjct: 1750 RPSKGIR 1756
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PIQPSRGV 9
P +PSRGV
Sbjct: 16 PPRPSRGV 23
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PIQPSRGV 9
P +PSRGV
Sbjct: 16 PPRPSRGV 23
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 2 PIQPSRGVR 10
P++P RG+R
Sbjct: 241 PVKPGRGLR 249
>sp|ORF24_TTVV1|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (strain VT416)
Query: 1 LPIQPSRGVR 10
+P+QP RG +
Sbjct: 132 VPLQPRRGAK 141
>sp|ORF24_TTVV2|ORF2/4 protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 LPIQPSRGVR 10
+P+QP RG +
Sbjct: 132 VPLQPRRGAK 141
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 LPIQPSRG 8
LP QPS G
Sbjct: 803 LPFQPSTG 810
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 QPSRGVR 10
+PS+G+R
Sbjct: 1750 RPSKGIR 1756
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 PSRGVR 10
P RGVR
Sbjct: 71 PKRGVR 76
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 5 PSRGVR 10
P RGVR
Sbjct: 71 PKRGVR 76
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 LPIQPSRGV 9
+P+Q ++GV
Sbjct: 163 IPLQATKGV 171
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 LPIQPSRGV 9
+P+Q ++GV
Sbjct: 163 IPLQATKGV 171
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 LPIQPSRGV 9
+P+Q ++GV
Sbjct: 163 IPLQATKGV 171
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 5 PSRGVR 10
PSRGV+
Sbjct: 40 PSRGVQ 45
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 LPIQPSRG 8
LP QP+ G
Sbjct: 804 LPFQPTTG 811
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 LPIQPSRG 8
LP QP+ G
Sbjct: 804 LPFQPTTG 811
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 LPIQPSRG 8
LP QP+ G
Sbjct: 804 LPFQPTTG 811
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 LPIQPSRG 8
LP QP+ G
Sbjct: 804 LPFQPTTG 811
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 LPIQPSRG 8
LP QP+ G
Sbjct: 804 LPFQPTTG 811
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LPIQPSRG 8
LP QP+ G
Sbjct: 804 LPFQPTTG 811
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 LPIQPSRG 8
LP QP+ G
Sbjct: 806 LPFQPTTG 813
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 LPIQPSRG 8
LP QP+ G
Sbjct: 799 LPFQPTTG 806
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 LPIQPSRG 8
LP QP+ G
Sbjct: 806 LPFQPTTG 813
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 LPIQPSRG 8
LP QP+ G
Sbjct: 803 LPFQPTTG 810
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 LPIQPSRG 8
LP QP+ G
Sbjct: 806 LPFQPTTG 813
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 LPIQPSRG 8
LP QP+ G
Sbjct: 803 LPFQPTTG 810
>sp|NEF_HV2ST|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 4 QPSRGVR 10
+PSRG+R
Sbjct: 11 EPSRGLR 17
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 5 PSRGVR 10
PSRGV+
Sbjct: 40 PSRGVQ 45
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 5 PSRGVR 10
PSRGV+
Sbjct: 40 PSRGVQ 45
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 PSRGVR 10
PSRGV+
Sbjct: 40 PSRGVQ 45
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 5 PSRGVR 10
PSRGV+
Sbjct: 40 PSRGVQ 45
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 PSRGVR 10
PSRGV+
Sbjct: 40 PSRGVQ 45
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 5 PSRGVR 10
PSRGV+
Sbjct: 40 PSRGVQ 45
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 5 PSRGVR 10
PSRGV+
Sbjct: 40 PSRGVQ 45
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 5 PSRGVR 10
PSRGV+
Sbjct: 40 PSRGVQ 45
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 5 PSRGVR 10
PSRGV+
Sbjct: 40 PSRGVQ 45
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 LPIQPSRGV 9
+P+Q ++GV
Sbjct: 175 IPLQVTKGV 183
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 LPIQPSRGV 9
+P+Q ++GV
Sbjct: 163 IPLQVTKGV 171
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 LPIQPSRGV 9
+P+Q ++GV
Sbjct: 169 IPLQVTKGV 177
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 LPIQPSRGV 9
+P+Q ++GV
Sbjct: 169 IPLQVTKGV 177
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 1 LPIQPSR 7
+P+QP+R
Sbjct: 87 IPLQPTR 93
7|Sequence|31|40|SRGVRQWQPD
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 4 VRQWQPD 10
VRQWQPD
Sbjct: 61 VRQWQPD 67
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 4 VRQWQPD 10
+RQWQPD
Sbjct: 71 IRQWQPD 77
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 4 VRQWQPD 10
+RQWQP+
Sbjct: 72 IRQWQPN 78
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 4 VRQWQPD 10
+RQWQP+
Sbjct: 72 IRQWQPN 78
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 4 VRQWQPD 10
+RQWQP+
Sbjct: 72 IRQWQPN 78
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 4 VRQWQP 9
+RQWQP
Sbjct: 73 IRQWQP 78
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 4 VRQWQPD 10
+RQWQP+
Sbjct: 72 IRQWQPN 78
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 4 VRQWQPD 10
++QWQP+
Sbjct: 71 IKQWQPN 77
>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)
Query: 1 SRGVRQWQPD 10
+RG+R PD
Sbjct: 157 ARGIRDLNPD 166
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 4 VRQWQP 9
+RQWQP
Sbjct: 80 LRQWQP 85
>sp|VP2_LORDV|MINOR capsid protein VP2|Lordsdale virus (strain GII/Human/United
Query: 3 GVRQWQPD 10
G R W PD
Sbjct: 113 GTRYWAPD 120
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 SRGVRQW 7
SRG R W
Sbjct: 1795 SRGARYW 1801
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 SRGVRQW 7
SRG R W
Sbjct: 1795 SRGARYW 1801
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 1 SRGVRQWQP 9
+RGVRQ P
Sbjct: 207 TRGVRQAPP 215
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 GVRQWQ 8
VRQWQ
Sbjct: 576 AVRQWQ 581
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 1 SRGVRQWQP 9
+RGVRQ P
Sbjct: 208 TRGVRQAPP 216
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 4 VRQWQP 9
++QWQP
Sbjct: 72 LKQWQP 77
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 VRQWQP 9
+RQW P
Sbjct: 6883 LRQWLP 6888
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 VRQWQP 9
+RQW P
Sbjct: 6860 LRQWLP 6865
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 VRQWQP 9
+RQW P
Sbjct: 6860 LRQWLP 6865
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 VRQWQP 9
+RQW P
Sbjct: 6881 LRQWLP 6886
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 VRQWQP 9
+RQW P
Sbjct: 6918 LRQWLP 6923
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 VRQWQP 9
+RQW P
Sbjct: 6938 LRQWLP 6943
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 VRQWQP 9
+RQW P
Sbjct: 6968 LRQWLP 6973
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 SRGVRQWQ 8
+R VR+WQ
Sbjct: 101 ARDVREWQ 108
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 3 GVRQWQPD 10
VR W PD
Sbjct: 543 AVRTWGPD 550
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 RGVRQWQP 9
+ + QWQP
Sbjct: 3179 KDIPQWQP 3186
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 RGVRQWQP 9
+ + QWQP
Sbjct: 3179 KDIPQWQP 3186
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 RGVRQWQP 9
+ + QWQP
Sbjct: 3179 KDIPQWQP 3186
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 RGVRQWQP 9
+ + QWQP
Sbjct: 3179 KDIPQWQP 3186
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 RGVRQWQP 9
+ + QWQP
Sbjct: 3179 KDIPQWQP 3186
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 4 VRQWQPD 10
+ QWQP+
Sbjct: 58 IDQWQPE 64
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 RGVRQWQP 9
+ + +WQP
Sbjct: 3199 KDISEWQP 3206
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 RGVRQWQP 9
+ + +WQP
Sbjct: 3199 KDISEWQP 3206
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 RGVRQWQP 9
+ + +WQP
Sbjct: 3199 KDISEWQP 3206
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 RGVRQWQP 9
+ + +WQP
Sbjct: 3199 KDISEWQP 3206
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 RGVRQWQP 9
+ + +WQP
Sbjct: 3199 KDISEWQP 3206
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 2 RGVRQW 7
+GVR W
Sbjct: 343 KGVRSW 348
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 VRQWQPD 10
V +W PD
Sbjct: 862 VHEWVPD 868
8|Sequence|36|45|QWQPDVEWAQ
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 QWQPDVEW 8
+WQP EW
Sbjct: 3204 EWQPSKEW 3211
>sp|PORTL_HHV7J|PORTAL protein|Human herpesvirus 7 (strain JI)
Query: 1 QWQPDVEWA 9
Q+ PD+E+A
Sbjct: 482 QYIPDIEYA 490
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 1 QWQPDV 6
QWQPDV
Sbjct: 73 QWQPDV 78
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 4 PDVEWA 9
PDV WA
Sbjct: 1878 PDVAWA 1883
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 QWQPDVEWA 9
+W+P V W+
Sbjct: 3216 EWKPSVGWS 3224
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 PDVEWAQ 10
PDV W+Q
Sbjct: 1907 PDVFWSQ 1913
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 4 PDVEWAQ 10
PD+ W Q
Sbjct: 2111 PDIHWTQ 2117
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 4 PDVEWAQ 10
PD+ W Q
Sbjct: 2107 PDIHWTQ 2113
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 QWQPDV 6
+WQP+V
Sbjct: 174 KWQPNV 179
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 1 QWQPDV 6
+WQPD+
Sbjct: 403 RWQPDL 408
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 1 QWQPDV 6
+WQPD+
Sbjct: 402 RWQPDL 407
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 1 QWQPDV 6
+WQPD+
Sbjct: 402 RWQPDL 407
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 QWQPDVEWA 9
+W+P WA
Sbjct: 3221 EWKPSSGWA 3229
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 QWQPDVEW 8
+WQP W
Sbjct: 3204 EWQPSKGW 3211
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 QPDVEWA 9
+PDV WA
Sbjct: 228 RPDVRWA 234
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 QWQPDV 6
+WQPD+
Sbjct: 403 RWQPDL 408
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 QWQPDVEW 8
+WQP W
Sbjct: 3204 EWQPSKGW 3211
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 QWQPDVEWA 9
+W+P W+
Sbjct: 3211 EWKPSTGWS 3219
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 1 QWQPDV 6
+W PDV
Sbjct: 490 RWSPDV 495
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 WQPDVEWAQ 10
W+P W
Sbjct: 201 WRPKTTWVH 209
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 QWQPD 5
QWQPD
Sbjct: 63 QWQPD 67
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 QWQPDVEW 8
+W ++EW
Sbjct: 1411 EWSGNIEW 1418
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 WQPDVEWA 9
W+P WA
Sbjct: 3197 WKPSQGWA 3204
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 QWQPDVEW 8
+W+P W
Sbjct: 3218 EWKPSTGW 3225
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 PDVEWAQ 10
PDV W++
Sbjct: 1935 PDVFWSK 1941
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 PDVEWAQ 10
PDV W++
Sbjct: 1945 PDVFWSK 1951
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 PDVEWAQ 10
PDV W++
Sbjct: 1945 PDVFWSK 1951
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 PDVEWAQ 10
PDV W++
Sbjct: 1955 PDVFWSK 1961
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 PDVEWAQ 10
PDV W++
Sbjct: 1945 PDVFWSK 1951
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 PDVEWAQ 10
PDV W++
Sbjct: 1945 PDVFWSK 1951
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 PDVEWAQ 10
PDV W++
Sbjct: 1936 PDVFWSK 1942
9|Sequence|41|50|VEWAQQFGGA
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 2 EWAQQFGG 9
E+AQ+ GG
Sbjct: 289 EYAQKLGG 296
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 2 EWAQQFGG 9
E+AQ+ GG
Sbjct: 289 EYAQKLGG 296
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 2 EWAQQFGG 9
E+AQ+ GG
Sbjct: 289 EYAQKLGG 296
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 2 EWAQQFGG 9
E+AQ+ GG
Sbjct: 289 EYAQKLGG 296
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 VEWAQQFGGA 10
++W+ FG A
Sbjct: 1445 IDWSAAFGAA 1454
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 VEWAQQF 7
V W QQF
Sbjct: 393 VLWEQQF 399
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 VEWAQQF 7
V W QQF
Sbjct: 393 VLWEQQF 399
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 VEWAQQF 7
V W QQF
Sbjct: 393 VLWEQQF 399
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 WAQQFG 8
WA+ FG
Sbjct: 619 WAEAFG 624
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 WAQQFG 8
WA+ FG
Sbjct: 620 WAEAFG 625
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 VEWAQQF 7
V W+Q+F
Sbjct: 350 VTWSQEF 356
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VEWAQQFG 8
V W +FG
Sbjct: 387 VRWTSRFG 394
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 3 WAQQFG 8
WA+ FG
Sbjct: 655 WARDFG 660
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2233 WRQEMGG 2239
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2237 WRQEMGG 2243
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2233 WRQEMGG 2239
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2238 WRQEMGG 2244
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2233 WRQEMGG 2239
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2233 WRQEMGG 2239
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2234 WRQEMGG 2240
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2233 WRQEMGG 2239
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2233 WRQEMGG 2239
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2233 WRQEMGG 2239
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2233 WRQEMGG 2239
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2233 WRQEMGG 2239
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2233 WRQEMGG 2239
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2233 WRQEMGG 2239
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2233 WRQEMGG 2239
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 EWAQQFG 8
+W Q+G
Sbjct: 64 QWCSQYG 70
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 EWAQQFG 8
+W Q+G
Sbjct: 64 QWCSQYG 70
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 EWAQQFG 8
+W Q+G
Sbjct: 64 QWCSQYG 70
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 EWAQQFG 8
+W Q+G
Sbjct: 64 QWCSQYG 70
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 EWAQQFG 8
+W Q+G
Sbjct: 64 QWCSQYG 70
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 EWAQQFG 8
+W Q+G
Sbjct: 64 QWCSQYG 70
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 EWAQQFG 8
+W Q+G
Sbjct: 64 QWCSQYG 70
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 2 EWAQQFG 8
+W Q+G
Sbjct: 64 QWCSQYG 70
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 EWAQQFG 8
+W Q+G
Sbjct: 64 QWCSQYG 70
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 EWAQQFG 8
+W Q+G
Sbjct: 64 QWCSQYG 70
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 3 WAQQFG 8
WA+ FG
Sbjct: 655 WARDFG 660
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2235 WRQEVGG 2241
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 WAQQFGG 9
W Q+ GG
Sbjct: 2231 WRQEVGG 2237
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 EWAQQFGG 9
+WAQ+ G
Sbjct: 241 QWAQEENG 248
10|Sequence|46|55|QFGGAVMYPS
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 3 GGAVMYP 9
GGAV+YP
Sbjct: 625 GGAVLYP 631
>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 QFGGAVMYP 9
QFG + YP
Sbjct: 389 QFGPSTYYP 397
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 1 QFGGAVMYP 9
QFG + YP
Sbjct: 385 QFGPSTYYP 393
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 1 QFGGAVMYP 9
QFG + YP
Sbjct: 389 QFGPSTYYP 397
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 1 QFGGAVMYPS 10
+FG MYP+
Sbjct: 274 KFGIETMYPA 283
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 QFGGAVMYPS 10
+FG MYP+
Sbjct: 274 KFGIETMYPA 283
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 1 QFGGAVMYPS 10
+FG MYP+
Sbjct: 274 KFGIETMYPA 283
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 QFGGAVMYPS 10
+FG MYP+
Sbjct: 274 KFGIETMYPA 283
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 1 QFGGAVMYPS 10
+FG MYP+
Sbjct: 274 KFGIETMYPA 283
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 1 QFGGAVMYPS 10
+FG MYP+
Sbjct: 274 KFGIETMYPA 283
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 1 QFGGAVMYPS 10
+FG MYP+
Sbjct: 274 KFGIETMYPA 283
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 QFGGAVMYPS 10
+FG MYP+
Sbjct: 274 KFGIETMYPA 283
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 FGGAVMYPS 10
F GA MY S
Sbjct: 320 FAGAPMYSS 328
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 2 FGGAVMYPS 10
F GA MY S
Sbjct: 320 FAGAPMYSS 328
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 QFGGAVMYPS 10
+FG MYP+
Sbjct: 274 KFGIETMYPA 283
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 QFGGAVMYPS 10
+FG MYP+
Sbjct: 274 KFGIETMYPA 283
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 QFGGAVMYPS 10
+FG MYP+
Sbjct: 274 KFGIETMYPA 283
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 1 QFGGAVMY 8
Q GG V+Y
Sbjct: 189 QVGGRVIY 196
11|Sequence|51|60|VMYPSKETAH
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 VMYPSKETAH 10
V P K TAH
Sbjct: 2007 VFLPEKNTAH 2016
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VMYPSKETAH 10
+MYPS++ H
Sbjct: 79 LMYPSQQKFH 88
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 2 MYPSKETAH 10
+YP +TAH
Sbjct: 327 VYPRNKTAH 335
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 VMYPSKETA 9
+MYP K+ +
Sbjct: 276 IMYPEKKAS 284
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 1 VMYPSKETAH 10
+YP+ +T H
Sbjct: 378 ALYPNAQTGH 387
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 2 MYPSKETAH 10
+YP+ +T H
Sbjct: 379 LYPNAQTGH 387
>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 1 VMYPSKETA 9
+M PSKE A
Sbjct: 289 LMIPSKEIA 297
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 MYPSKETAH 10
+YP K T H
Sbjct: 308 IYPGKITGH 316
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 1 VMYPSKETA 9
+M PSKE A
Sbjct: 289 LMIPSKEIA 297
12|Sequence|56|65|KETAHWKPPP
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 3 TAHWKPPP 10
T H KPPP
Sbjct: 352 TVHQKPPP 359
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 5 HWKPPP 10
HW PPP
Sbjct: 397 HWLPPP 402
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 5 HWKPPP 10
HW PPP
Sbjct: 389 HWLPPP 394
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 5 HWKPPP 10
HW PPP
Sbjct: 389 HWLPPP 394
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 KETAHWKPP 9
K H+KPP
Sbjct: 454 KPVMHYKPP 462
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 5 HWKPP 9
HWKPP
Sbjct: 73 HWKPP 77
>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 3 TAHWKPP 9
T+ WKPP
Sbjct: 105 TSDWKPP 111
>sp|SLFN_VACCC|SCHLAFEN-LIKE protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KETAHWKPPP 10
KE+ W P P
Sbjct: 71 KESGGWSPRP 80
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 KETAHWKP 8
K+T WKP
Sbjct: 3211 KDTQEWKP 3218
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 KETAHWKP 8
K+T WKP
Sbjct: 3211 KDTQEWKP 3218
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 KETAHWKP 8
K+T WKP
Sbjct: 3207 KDTQEWKP 3214
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 KETAHWKP 8
K+T WKP
Sbjct: 3214 KDTQEWKP 3221
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 5 HWKPP 9
HW PP
Sbjct: 723 HWYPP 727
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 KETAHWKP 8
K+T W+P
Sbjct: 3201 KDTGEWEP 3208
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 KETAHWKPP 9
K+T WKP
Sbjct: 3212 KDTQEWKPS 3220
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 HWKPP 9
H+KPP
Sbjct: 193 HFKPP 197
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 5 HWKPP 9
H+KPP
Sbjct: 193 HFKPP 197
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 HWKPP 9
H+KPP
Sbjct: 193 HFKPP 197
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 5 HWKPP 9
HW PP
Sbjct: 279 HWTPP 283
>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)
Query: 5 HWKPP 9
H+KPP
Sbjct: 193 HFKPP 197
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 1 KETAHWKPPP 10
K T W P P
Sbjct: 725 KATGRWNPQP 734
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 1 KETAHWKPPP 10
K T W P P
Sbjct: 725 KATGRWNPQP 734
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 5 HWKPP 9
HW PP
Sbjct: 279 HWTPP 283
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 6 WKPPP 10
WK PP
Sbjct: 595 WKRPP 599
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 6 WKPPP 10
WK PP
Sbjct: 595 WKRPP 599
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 KETAHW 6
KET +W
Sbjct: 3595 KETIYW 3600
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 KETAHW 6
KET +W
Sbjct: 3615 KETIYW 3620
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 KETAHW 6
KET +W
Sbjct: 3645 KETIYW 3650
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 KETAHW 6
KET +W
Sbjct: 3595 KETIYW 3600
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 KETAHW 6
KET +W
Sbjct: 3615 KETIYW 3620
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 KETAHW 6
KET +W
Sbjct: 3645 KETIYW 3650
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 WKPP 9
W+PP
Sbjct: 15 WRPP 18
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 WKPP 9
W+PP
Sbjct: 15 WRPP 18
>sp|UL03_HCMVA|UNCHARACTERIZED protein UL3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 TAHWKPPP 10
++HW P P
Sbjct: 56 SSHWVPYP 63
13|Sequence|61|70|WKPPPWNDVD
>sp|UL116_HCMVA|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PPWNDVD 10
PPW D+D
Sbjct: 238 PPWRDID 244
>sp|UL39_HCMVA|UNCHARACTERIZED protein UL39|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPPW 6
PPPW
Sbjct: 23 PPPW 26
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 2 KPPPWNDVD 10
+PPP N+ D
Sbjct: 378 RPPPTNEAD 386
>sp|UL116_HCMVM|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PPWNDVD 10
PPW D+D
Sbjct: 237 PPWRDID 243
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 4 PPWNDVD 10
PPW D++
Sbjct: 215 PPWGDIN 221
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 4 PPWNDVD 10
PPW D++
Sbjct: 215 PPWGDIN 221
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 4 PPWN 7
PPWN
Sbjct: 2217 PPWN 2220
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 4 PPWN 7
PPWN
Sbjct: 2217 PPWN 2220
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 4 PPWN 7
PPWN
Sbjct: 238 PPWN 241
>sp|U24_HHV7J|U24 protein|Human herpesvirus 7 (strain JI)
Query: 3 PPPWNDV 9
PP +NDV
Sbjct: 7 PPSYNDV 13
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 4 PPWN 7
PPWN
Sbjct: 238 PPWN 241
>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PPPWND 8
P PWN+
Sbjct: 178 PGPWNE 183
>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PPPWND 8
P PWN+
Sbjct: 178 PGPWNE 183
>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PPPWND 8
P PWN+
Sbjct: 178 PGPWNE 183
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 1 WKPPPWNDVD 10
W P W D D
Sbjct: 375 WDPNGWTDTD 384
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 1 WKPPPWNDVD 10
W P W D D
Sbjct: 375 WDPNGWTDTD 384
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 1 WKPPPWNDVD 10
W P W D D
Sbjct: 375 WDPNGWTDTD 384
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 1 WKPPPWNDVD 10
W P W D D
Sbjct: 375 WDPNGWTDTD 384
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 1 WKPPPWNDVD 10
W P W D D
Sbjct: 375 WDPNGWTDTD 384
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 1 WKPPPWNDVD 10
W P W D D
Sbjct: 375 WDPNGWTDTD 384
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 1 WKPPPWNDVD 10
W P W D D
Sbjct: 375 WDPNGWTDTD 384
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 1 WKPPPWNDVD 10
W P W D D
Sbjct: 375 WDPNGWTDTD 384
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 1 WKPPPWNDVD 10
W P W D D
Sbjct: 375 WDPNGWTDTD 384
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 3 PPPWN 7
PPP+N
Sbjct: 52 PPPFN 56
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 PPPWN 7
PPP+N
Sbjct: 52 PPPFN 56
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PPPWN 7
PPP+N
Sbjct: 52 PPPFN 56
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PPPWN 7
PPP+N
Sbjct: 52 PPPFN 56
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 3 PPPWN 7
PPP+N
Sbjct: 52 PPPFN 56
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 WKPPPWNDVD 10
W P W D D
Sbjct: 375 WDPNGWTDTD 384
>sp|C20L_VACCC|UNCHARACTERIZED protein C20L|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PPWND 8
P WND
Sbjct: 39 PSWND 43
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 1 WKPPPWNDVD 10
W P W D D
Sbjct: 375 WDPNGWTDTD 384
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPPWNDV 9
PP WN V
Sbjct: 93 PPGWNLV 99
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPPWNDV 9
PP WN V
Sbjct: 93 PPGWNLV 99
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 3 PPPWNDVD 10
PPP N+ D
Sbjct: 519 PPPGNNKD 526
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 3 PPPWNDVD 10
PPP N+ D
Sbjct: 519 PPPGNNKD 526
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 WKPPP 5
W PPP
Sbjct: 210 WYPPP 214
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 1 WKPPP 5
W PPP
Sbjct: 398 WLPPP 402
>sp|PG200_VACCC|PROTEIN OPG200|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KPPPWNDV 9
K PW+DV
Sbjct: 73 KNMPWDDV 80
>sp|PG200_VARV|PROTEIN OPG200|Variola virus
Query: 2 KPPPWNDV 9
K PW+DV
Sbjct: 73 KNMPWDDV 80
>sp|PG200_VAR67|PROTEIN OPG200|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 KPPPWNDV 9
K PW+DV
Sbjct: 73 KNMPWDDV 80
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 4 PPWNDVD 10
PPW D++
Sbjct: 216 PPWGDIN 222
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 4 PPWNDVD 10
PPW D++
Sbjct: 215 PPWGDIN 221
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 WKPPPW 6
W+P PW
Sbjct: 579 WRPAPW 584
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 4 PPWNDVD 10
P WN+V+
Sbjct: 233 PHWNNVE 239
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 1 WKPPP 5
W PPP
Sbjct: 390 WLPPP 394
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 1 WKPPP 5
W PPP
Sbjct: 390 WLPPP 394
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PPWNDV 9
PP ND+
Sbjct: 94 PPMNDI 99
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 4 PPWNDV 9
PP ND+
Sbjct: 94 PPMNDI 99
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 KPPPW 6
KP PW
Sbjct: 242 KPSPW 246
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 WKPPPW 6
W+P PW
Sbjct: 579 WRPAPW 584
>sp|PG027_MONPZ|INTERFERON antagonist OPG027|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 4 PPWNDVD 10
P W+++D
Sbjct: 50 PDWSEID 56
>sp|PG027_MONPV|INTERFERON antagonist OPG027|Monkeypox virus (MPXV)
Query: 4 PPWNDVD 10
P W+++D
Sbjct: 50 PDWSEID 56
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 WKPPPW 6
+ PPPW
Sbjct: 91 YDPPPW 96
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 WKPPPW 6
+ PPPW
Sbjct: 91 YDPPPW 96
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 WKPPPW 6
+ PPPW
Sbjct: 91 YDPPPW 96
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 3 PPPWN 7
PPP+N
Sbjct: 338 PPPFN 342
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 WKPPPWNDVD 10
W P W D D
Sbjct: 375 WDPNGWTDTD 384
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 4 PPWNDV 9
PP ND+
Sbjct: 94 PPMNDI 99
>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WKPPPW 6
W P PW
Sbjct: 188 WSPTPW 193
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PWND 8
PWND
Sbjct: 580 PWND 583
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 3 PPPWN 7
PPP+N
Sbjct: 339 PPPFN 343
>sp|PG027_VARV|INTERFERON antagonist OPG027|Variola virus
Query: 4 PPWNDVD 10
P W+++D
Sbjct: 50 PDWSEID 56
>sp|PG027_VAR67|INTERFERON antagonist OPG027|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 PPWNDVD 10
P W+++D
Sbjct: 50 PDWSEID 56
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 359 WDPNGWTETD 368
>sp|PG027_VACCC|INTERFERON antagonist OPG027|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PPWNDVD 10
P W+++D
Sbjct: 50 PDWSEID 56
>sp|PG027_VACCA|INTERFERON antagonist OPG027|Vaccinia virus (strain Ankara) (VACV)
Query: 4 PPWNDVD 10
P W+++D
Sbjct: 50 PDWSEID 56
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 375 WDPNGWTETD 384
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 WKPPPW 6
W+P PW
Sbjct: 560 WRPAPW 565
>sp|Y168_ADE02|UNCHARACTERIZED protein C-168|Human adenovirus C serotype 2
Query: 1 WKPPP 5
WK PP
Sbjct: 81 WKTPP 85
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 375 WDPNGWTETD 384
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 375 WDPNGWTETD 384
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 3 PPPWN 7
PPP+N
Sbjct: 339 PPPFN 343
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 375 WDPNGWTETD 384
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 375 WDPNGWTETD 384
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 375 WDPNGWTETD 384
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 355 WDPNGWTETD 364
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 360 WDPNGWTETD 369
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 375 WDPNGWTETD 384
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 375 WDPNGWTETD 384
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 375 WDPNGWTETD 384
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 3 PPPWN 7
PPP+N
Sbjct: 339 PPPFN 343
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 375 WDPNGWTETD 384
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 3 PPPWN 7
PPP+N
Sbjct: 339 PPPFN 343
>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 PPPWNDV 9
PP +ND+
Sbjct: 10 PPAYNDI 16
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 347 WDPNGWTETD 356
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 375 WDPNGWTNTD 384
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 WKPPP 5
WK PP
Sbjct: 595 WKRPP 599
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 356 WDPNGWTETD 365
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 PPPWNDVD 10
P PW+ D
Sbjct: 2817 PSPWDPAD 2824
>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 PPPWNDV 9
PP +ND+
Sbjct: 10 PPAYNDI 16
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 4 PPWND 8
PPW D
Sbjct: 695 PPWED 699
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 3 PPPWN 7
PPP+N
Sbjct: 341 PPPFN 345
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 3 PPPWNDVD 10
PPP +VD
Sbjct: 365 PPPNRNVD 372
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 WKPPP 5
WK PP
Sbjct: 595 WKRPP 599
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 1 WKPPPWNDVD 10
W P W + D
Sbjct: 356 WDPNGWTETD 365
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 3 PPPWN 7
PPP+N
Sbjct: 339 PPPFN 343
14|Sequence|66|75|WNDVDPPKDT
>sp|VEMP_CVHOC|ENVELOPE small membrane protein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 WNDVDPP 7
+NDV PP
Sbjct: 71 YNDVKPP 77
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 2 NDVDPPKDT 10
NDV PK+T
Sbjct: 104 NDVTAPKET 112
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 2 NDVDPPKDT 10
NDV PK+T
Sbjct: 104 NDVTAPKET 112
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 DVDPPKDT 10
DV+PP ++
Sbjct: 1534 DVEPPSES 1541
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 WNDVDPP 7
WN V PP
Sbjct: 970 WNLVTPP 976
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 5 DPPKDT 10
DPPK T
Sbjct: 488 DPPKGT 493
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 DVDPP 7
D+DPP
Sbjct: 581 DIDPP 585
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 5 DPPKDT 10
DPPK T
Sbjct: 488 DPPKGT 493
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 5 DPPKDT 10
DPPK T
Sbjct: 488 DPPKGT 493
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 1 WNDVDPPKDT 10
W+ VD P T
Sbjct: 307 WDPVDTPYST 316
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 3 DVDPPKDT 10
D PPKD+
Sbjct: 451 DSCPPKDS 458
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 WNDVDPPK 8
WN++ P K
Sbjct: 354 WNEIIPSK 361
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 NDVDP 6
ND+DP
Sbjct: 1022 NDIDP 1026
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 3 DVDPPKDT 10
D DPP +T
Sbjct: 742 DADPPDET 749
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 3 DVDPPKDT 10
D DPP +T
Sbjct: 742 DADPPDET 749
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NDVDP 6
ND+DP
Sbjct: 1022 NDIDP 1026
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 WNDVDPPK 8
WN+V P K
Sbjct: 354 WNEVIPSK 361
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 WNDVDPPKDT 10
W+D P K T
Sbjct: 76 WHDCRPKKIT 85
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 WNDVDPPK 8
WN++ P K
Sbjct: 354 WNEIIPSK 361
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 1 WNDVDPPK 8
WN++ P K
Sbjct: 354 WNEIIPSK 361
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 WNDVDPPK 8
WN++ P K
Sbjct: 354 WNEIIPSK 361
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WNDVDPP 7
W D D P
Sbjct: 44 WEDADTP 50
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 1 WNDVDPPK 8
WN++ P K
Sbjct: 354 WNEIIPSK 361
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 1 WNDVDPPK 8
WN++ P K
Sbjct: 354 WNEIIPSK 361
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 WNDVDPPK 8
W D PK
Sbjct: 790 WGDTSSPK 797
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 DVDPPKDT 10
D+D P+DT
Sbjct: 768 DLDAPQDT 775
>sp|PG001_VAR67|CHEMOKINE-BINDING protein|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 DVDPP 7
DVDPP
Sbjct: 84 DVDPP 88
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 WNDVDPPK 8
WN++ P K
Sbjct: 354 WNEIIPSK 361
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 1 WNDVDPPK 8
WN++ P K
Sbjct: 354 WNEILPSK 361
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 WNDVDPP 7
W + DPP
Sbjct: 2453 WENPDPP 2459
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 WNDVDPPK 8
WN++ P K
Sbjct: 354 WNEIIPSK 361
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 1 WNDVDPPKDT 10
W D+D P+ +
Sbjct: 358 WVDIDVPESS 367
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 WNDVDPPK 8
WN++ P K
Sbjct: 354 WNEIIPSK 361
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 DVDPPK 8
DVD PK
Sbjct: 4671 DVDDPK 4676
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 1 WNDVDPPK 8
WN++ P K
Sbjct: 354 WNEILPSK 361
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 DVDPPKDT 10
DVD PK++
Sbjct: 115 DVDLPKNS 122
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 WNDVDPPK 8
WN++ P K
Sbjct: 354 WNEIIPSK 361
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 1 WNDVDPPK 8
WN++ P K
Sbjct: 354 WNEILPSK 361
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 NDVDPP 7
NDVD P
Sbjct: 238 NDVDRP 243
>sp|PG001_VACCL|CHEMOKINE-BINDING protein|Vaccinia virus (strain Lister) (VACV)
Query: 3 DVDPP 7
DVDPP
Sbjct: 89 DVDPP 93
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 1 WNDVDPPKDT 10
W+ +D P T
Sbjct: 307 WDPLDTPYST 316
>sp|PG001_VACCC|INACTIVE chemokine-binding protein|Vaccinia virus (strain Copenhagen)
Query: 3 DVDPP 7
DVDPP
Sbjct: 75 DVDPP 79
15|Sequence|71|80|PPKDTIVKNI
>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PPKDTIVKNI 10
PP TI++N+
Sbjct: 348 PPSGTIMRNV 357
>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PPKDTIVKNI 10
PP TI++N+
Sbjct: 348 PPSGTIMRNV 357
>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PPKDTIVKNI 10
PP TI++N+
Sbjct: 348 PPSGTIMRNV 357
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 1 PPKDTIVKNI 10
PPK + KN+
Sbjct: 27 PPKKKLRKNV 36
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 3 KDTIVKNI 10
KD ++KN+
Sbjct: 329 KDNLIKNV 336
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 3 KDTIVKNI 10
KD ++KN+
Sbjct: 329 KDNLIKNV 336
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 2 PKDTIVKN 9
PK T +KN
Sbjct: 333 PKQTCIKN 340
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PKDTIVKN 9
PK T +KN
Sbjct: 333 PKQTCIKN 340
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 PKDTIVKN 9
P D+ VKN
Sbjct: 6699 PMDSTVKN 6706
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 PKDTIVKNI 10
PK+TI+K +
Sbjct: 99 PKETILKKL 107
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 PPKDTIVK 8
P KDTI K
Sbjct: 1886 PDKDTIEK 1893
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 PKDTIVKN 9
P D+ VKN
Sbjct: 6722 PMDSTVKN 6729
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 PKDTIVKN 9
P+D IV+N
Sbjct: 607 PQDHIVQN 614
16|Sequence|76|85|IVKNITLNFG
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 VKNITLNF 9
VKN+ LNF
Sbjct: 257 VKNLILNF 264
>sp|YVAD_VACCC|UNCHARACTERIZED 9.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IVKNITLNF 9
+V+NI LNF
Sbjct: 11 LVRNILLNF 19
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 2 VKNITLNF 9
VKN+ LNF
Sbjct: 257 VKNLILNF 264
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VKNITLNF 9
VKN+ LNF
Sbjct: 257 VKNLILNF 264
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VKNITLN 8
VKN+T+N
Sbjct: 81 VKNLTMN 87
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 NITLNF 9
N+T+NF
Sbjct: 47 NVTINF 52
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 NITLNF 9
N+T+NF
Sbjct: 47 NVTINF 52
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 IVKNITLNFG 10
+VK ++ NFG
Sbjct: 944 LVKQLSSNFG 953
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 IVKNITLNFG 10
+VK ++ NFG
Sbjct: 962 LVKQLSSNFG 971
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 IVKNITLNFG 10
+VK ITL+ G
Sbjct: 284 VVKKITLSPG 293
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IVKNITLNFG 10
I+K +T FG
Sbjct: 1188 IIKELTHKFG 1197
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VKNITLNF 9
+KN+T NF
Sbjct: 85 LKNVTENF 92
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 IVKNITLNF 9
+++N+T NF
Sbjct: 84 VLENVTENF 92
17|Sequence|81|90|TLNFGPQHPA
>sp|UL96_HCMVM|PROTEIN UL96|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 FGPQH 8
+GPQH
Sbjct: 29 YGPQH 33
>sp|UL96_HCMVA|PROTEIN UL96|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 FGPQH 8
+GPQH
Sbjct: 29 YGPQH 33
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 TLNFGP 6
TL+FGP
Sbjct: 334 TLSFGP 339
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 TLNFGP 6
TL+FGP
Sbjct: 334 TLSFGP 339
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 TLNFGP 6
TL+FGP
Sbjct: 334 TLSFGP 339
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 TLNFGP 6
TL+FGP
Sbjct: 334 TLSFGP 339
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 NFGPQH 8
NFG QH
Sbjct: 224 NFGAQH 229
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 NFGPQH 8
NFG QH
Sbjct: 224 NFGAQH 229
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 3 NFGPQH 8
NFG QH
Sbjct: 224 NFGAQH 229
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 NFGPQH 8
NFG QH
Sbjct: 224 NFGAQH 229
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 NFGPQH 8
NFG QH
Sbjct: 224 NFGAQH 229
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 NFGPQH 8
NFG QH
Sbjct: 224 NFGAQH 229
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 PQHPA 10
PQHPA
Sbjct: 97 PQHPA 101
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 PQHPA 10
PQHPA
Sbjct: 97 PQHPA 101
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 LNFGPQHP 9
L F P+HP
Sbjct: 1032 LVFDPKHP 1039
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 NFGPQH 8
NFG QH
Sbjct: 224 NFGAQH 229
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 2 LNFGPQH 8
+NF P H
Sbjct: 97 VNFSPHH 103
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 2 LNFGPQH 8
+NF P H
Sbjct: 97 VNFNPHH 103
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 LNFGPQH 8
+ FGP H
Sbjct: 520 VEFGPPH 526
>sp|UL17_HCMVT|PROTEIN UL17|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 GPQHPA 10
GPQ PA
Sbjct: 52 GPQRPA 57
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 4 FGPQH 8
+GPQH
Sbjct: 278 YGPQH 282
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 FGPQH 8
+GPQH
Sbjct: 94 YGPQH 98
>sp|UL17_HCMVM|PROTEIN UL17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GPQHPA 10
GPQ PA
Sbjct: 52 GPQRPA 57
>sp|UL17_HCMVA|UNCHARACTERIZED protein UL17|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GPQHPA 10
GPQ PA
Sbjct: 52 GPQRPA 57
18|Sequence|86|95|PQHPAAHGVL
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 QHPAAHGV 9
+HP AHGV
Sbjct: 463 RHPPAHGV 470
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PQHPAA-HG 8
PQ+PAA HG
Sbjct: 378 PQYPAALHG 386
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 QHPAAHGV 9
+HP HGV
Sbjct: 463 RHPPEHGV 470
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 3 HPAAHG 8
HP AH
Sbjct: 357 HPTAHA 362
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 4 PAAHGVL 10
PA HG L
Sbjct: 231 PATHGAL 237
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PQHPAAH 7
P HP A+
Sbjct: 312 PDHPTAN 318
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PQHPAAH 7
P HP A+
Sbjct: 312 PDHPTAN 318
>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PQHPAAHGV 9
PQ P A GV
Sbjct: 27 PQQPCAPGV 35
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 5 AAHGVL 10
AAHG+L
Sbjct: 678 AAHGLL 683
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 5 AAHGVL 10
AAHG+L
Sbjct: 678 AAHGLL 683
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 QHPAAHGV 9
+HP HGV
Sbjct: 461 RHPPEHGV 468
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 PQHPAAHGVL 10
P AHG+L
Sbjct: 757 PHTSGAHGLL 766
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 QHPAAHGV 9
+HP HGV
Sbjct: 462 RHPPEHGV 469
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 QHPAAHGV 9
+HP HGV
Sbjct: 463 RHPPEHGV 470
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 PQHPAAHGVL 10
PQ PAA V+
Sbjct: 975 PQSPAADRVV 984
19|Sequence|91|100|AHGVLRLVME
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 AHGVLRLVM 9
AHG++RL M
Sbjct: 915 AHGLIRLCM 923
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 AHGVLRLVM 9
AHG++RL M
Sbjct: 915 AHGLIRLCM 923
>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22
Query: 2 HGVLRL 7
HG+LRL
Sbjct: 49 HGILRL 54
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 VLRLVME 10
VLRL+ME
Sbjct: 1763 VLRLLME 1769
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 4 VLRLVME 10
VLRL+ME
Sbjct: 1763 VLRLMME 1769
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 2 HGVLRL 7
HG LRL
Sbjct: 417 HGALRL 422
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 2 HGVLRL 7
HG LRL
Sbjct: 415 HGALRL 420
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 AHGVLRLVM 9
A+G LRLV+
Sbjct: 1544 ANGDLRLVL 1552
20|Sequence|96|105|RLVMELSGEM
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 LVMELSGE 9
LVM LSGE
Sbjct: 293 LVMHLSGE 300
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 LVMELSGE 9
LVM+LSG+
Sbjct: 166 LVMKLSGD 173
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 LVMELSGE 9
LVM+LSG+
Sbjct: 227 LVMKLSGD 234
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 LVMELSGE 9
LVM+LSG+
Sbjct: 297 LVMKLSGD 304
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 LVMELSGEM 10
+V+E+SGE+
Sbjct: 633 IVLEISGEL 641
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 RLVMELSGE 9
+ +M+LSGE
Sbjct: 1312 KFLMDLSGE 1320
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LVMELSGEM 10
+VME G+M
Sbjct: 601 VVMEAGGQM 609
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LVMELSGEM 10
+VME G+M
Sbjct: 600 VVMEAGGQM 608
21|Sequence|101|110|LSGEMVRKCD
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 LSGEMVRKCD 10
L+GE ++CD
Sbjct: 675 LAGEEAQRCD 684
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 LSGEMVRKCD 10
L+GE ++CD
Sbjct: 680 LAGEEAQRCD 689
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 LSGEMVRKCD 10
+S E+VR CD
Sbjct: 2020 VSRELVRNCD 2029
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 LSGEMVRKCD 10
L+GE ++CD
Sbjct: 682 LAGEEAQRCD 691
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 3 GEMVRKC 9
GEM+R C
Sbjct: 332 GEMLRTC 338
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 3 GEMVRKC 9
GEM+R C
Sbjct: 332 GEMLRTC 338
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 3 GEMVRKC 9
GEM+R C
Sbjct: 332 GEMLRTC 338
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 3 GEMVRKC 9
GEM+R C
Sbjct: 319 GEMLRAC 325
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 3 GEMVRKC 9
GEM+R C
Sbjct: 319 GEMLRAC 325
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 GEMVRKC 9
GEM+R C
Sbjct: 319 GEMLRAC 325
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 GEMVRKC 9
GEM+R C
Sbjct: 319 GEMLRAC 325
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 3 GEMVRKC 9
GEM+R C
Sbjct: 319 GEMLRAC 325
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 3 GEMVRKC 9
GEM+R C
Sbjct: 319 GEMLRAC 325
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 EMVRKCD 10
E+VR CD
Sbjct: 2023 ELVRNCD 2029
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 EMVRKCD 10
E+VR CD
Sbjct: 2023 ELVRNCD 2029
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 EMVRKCD 10
E+VR CD
Sbjct: 2023 ELVRNCD 2029
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 EMVRKCD 10
E+VR CD
Sbjct: 2023 ELVRNCD 2029
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 EMVRKCD 10
E+VR CD
Sbjct: 2023 ELVRNCD 2029
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 SGEMVRKCD 10
+GE+V CD
Sbjct: 251 TGELVLGCD 259
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 SGEMVRKCD 10
+GE+V CD
Sbjct: 251 TGELVLGCD 259
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 SGEMVRKCD 10
+GE+V CD
Sbjct: 251 TGELVLGCD 259
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 SGEMVRKCD 10
SGE+ +CD
Sbjct: 723 SGEVRNQCD 731
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 2 SGEMVRK 8
SGE+VR+
Sbjct: 472 SGELVRR 478
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 EMVRKCD 10
E+VR CD
Sbjct: 2023 ELVRGCD 2029
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 EMVRKCD 10
E+VR CD
Sbjct: 2023 ELVRGCD 2029
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 EMVRKCD 10
E+VR CD
Sbjct: 2023 ELVRGCD 2029
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 3 GEMVRKC 9
GEM R C
Sbjct: 1054 GEMERDC 1060
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 GEMVRKC 9
GEM R C
Sbjct: 1054 GEMERDC 1060
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 GEMVRKC 9
GEM R C
Sbjct: 1054 GEMERDC 1060
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GEMVRKC 9
GEM R C
Sbjct: 1054 GEMERDC 1060
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 GEMVRKC 9
GEM R C
Sbjct: 1046 GEMERDC 1052
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 3 GEMVRKC 9
GEM R C
Sbjct: 1054 GEMERDC 1060
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 3 GEMVRKC 9
GEM R C
Sbjct: 1054 GEMERDC 1060
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 3 GEMVRKC 9
GEM R C
Sbjct: 1054 GEMERDC 1060
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 3 GEMVRKC 9
GEM R C
Sbjct: 1054 GEMERDC 1060
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 LSGEMVRKC 9
L+G++ R+C
Sbjct: 1094 LTGDVERRC 1102
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 LSGEMVRKC 9
L+G++ R+C
Sbjct: 1093 LTGDVERRC 1101
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 LSGEMVRKC 9
L+G++ R+C
Sbjct: 1093 LTGDVERRC 1101
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 GEMVRKC 9
G+M+R C
Sbjct: 326 GDMLRAC 332
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 GEMVRKC 9
G+M+R C
Sbjct: 326 GDMLRAC 332
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 GEMVRKC 9
G+M+R C
Sbjct: 326 GDMLRAC 332
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 GEMVRKC 9
G+M+R C
Sbjct: 326 GDMLRAC 332
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 GEMVRKC 9
G+M+R C
Sbjct: 326 GDMLRAC 332
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 GEMVRKC 9
G+M+R C
Sbjct: 326 GDMLRAC 332
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 GEMVRKC 9
G+M+R C
Sbjct: 326 GDMLRAC 332
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 GEMVRKC 9
G+M+R C
Sbjct: 326 GDMLRAC 332
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 GEMVRKC 9
G+M+R C
Sbjct: 326 GDMLRAC 332
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 GEMVRKC 9
G+M+R C
Sbjct: 326 GDMLRAC 332
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 3 GEMVRKC 9
GE++++C
Sbjct: 143 GELIQRC 149
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 GEMVRKC 9
G+M +KC
Sbjct: 686 GQMYQKC 692
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 LSGEMVRKC 9
LSG + KC
Sbjct: 809 LSGYKISKC 817
22|Sequence|106|115|VRKCDPHIGL
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 VRKCDPHIG 9
+R+CDPHIG
Sbjct: 32 LRRCDPHIG 40
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 VRKCDPHIG 9
+R+CDPHIG
Sbjct: 32 LRRCDPHIG 40
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 1 VRKCDPHIG 9
+R+CDPHIG
Sbjct: 32 LRRCDPHIG 40
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 VRKCDPHIGL 10
+R+CDP IGL
Sbjct: 36 LRRCDPQIGL 45
>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 VRKCDPHIGL 10
+R+CDP IGL
Sbjct: 36 LRRCDPQIGL 45
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 DPHIGL 10
DPH+GL
Sbjct: 210 DPHVGL 215
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VRKCDPHIG 9
+R+CDP +
Sbjct: 26 LRRCDPRVA 34
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VRKCDPHIGL 10
VR CD H L
Sbjct: 490 VRNCDEHEAL 499
Query: 1 VRKCDPHIGL 10
++ CDP++ L
Sbjct: 26 LKYCDPNVLL 35
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VRKCDPHIGL 10
VR CD H L
Sbjct: 490 VRNCDEHEAL 499
Query: 1 VRKCDPHIGL 10
++ CDP++ L
Sbjct: 26 LKYCDPNVLL 35
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 RKCDPH 7
R+C PH
Sbjct: 1100 RRCHPH 1105
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 RKCDPH 7
R+C PH
Sbjct: 1099 RRCHPH 1104
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 RKCDPH 7
R+C PH
Sbjct: 1099 RRCHPH 1104
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 VRKCDPH 7
+ KC+PH
Sbjct: 483 ITKCEPH 489
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 VRKCDPH 7
+ KC+PH
Sbjct: 483 ITKCEPH 489
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 2 RKCDPHIG 9
R+CDP G
Sbjct: 235 RQCDPDEG 242
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 2 RKCDPHI 8
R+C PH+
Sbjct: 582 RRCLPHL 588
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RKCDPH 7
R C+PH
Sbjct: 194 RVCEPH 199
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RKCDPH 7
R C+PH
Sbjct: 194 RVCEPH 199
>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 CDPHI 8
CDP+I
Sbjct: 81 CDPYI 85
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 3 KCDPHIGL 10
+C P +GL
Sbjct: 447 RCSPDMGL 454
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 3 KCDPHIGL 10
+C P +GL
Sbjct: 447 RCSPDMGL 454
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CDPH 7
CDPH
Sbjct: 534 CDPH 537
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CDPH 7
CDPH
Sbjct: 534 CDPH 537
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 CDPH 7
CDPH
Sbjct: 534 CDPH 537
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 1 VRKCDPHIG 9
+ KC HIG
Sbjct: 386 ITKCTMHIG 394
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 6 PHIGL 10
PH+GL
Sbjct: 211 PHVGL 215
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 6 PHIGL 10
PH+GL
Sbjct: 211 PHVGL 215
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 6 PHIGL 10
PH+GL
Sbjct: 211 PHVGL 215
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 6 PHIGL 10
PH+GL
Sbjct: 211 PHVGL 215
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 VRKCDPH 7
+R C PH
Sbjct: 49 LRNCAPH 55
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 VRKCDPH 7
+R C PH
Sbjct: 49 LRNCAPH 55
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 3 KCDPHI 8
+C PH+
Sbjct: 369 RCHPHV 374
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 3 KCDPHI 8
+C PH+
Sbjct: 369 RCHPHV 374
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 3 KCDPHI 8
+C PH+
Sbjct: 369 RCHPHV 374
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 3 KCDPHI 8
+C PH+
Sbjct: 369 RCHPHV 374
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 3 KCDPHI 8
+C PH+
Sbjct: 369 RCHPHV 374
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 3 KCDPHI 8
+C PH+
Sbjct: 369 RCHPHV 374
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 3 KCDPHI 8
+C PH+
Sbjct: 369 RCHPHV 374
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 3 KCDPHI 8
+C PH+
Sbjct: 369 RCHPHV 374
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 3 KCDPHI 8
+C PH+
Sbjct: 369 RCHPHV 374
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 3 KCDPHI 8
+C PH+
Sbjct: 369 RCHPHV 374
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 VRKCDPH 7
++KC PH
Sbjct: 18 LQKCFPH 24
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 VRKCDPH 7
++KC PH
Sbjct: 18 LQKCFPH 24
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 3 KCDPHI 8
+C PH+
Sbjct: 369 RCHPHV 374
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 VRKCDPH 7
+R C PH
Sbjct: 49 LRNCVPH 55
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 VRKCDP 6
VRK DP
Sbjct: 333 VRKADP 338
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 VRKCDP 6
VRK DP
Sbjct: 333 VRKADP 338
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 2 RKCDPH 7
R+C PH
Sbjct: 55 RECGPH 60
23|Sequence|111|120|PHIGLLHRGT
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 PHIGLLHR 8
P IG++HR
Sbjct: 45 PFIGVVHR 52
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PHIGLLHRG 9
P++ + HRG
Sbjct: 244 PNVAVKHRG 252
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PHIGLLHRG 9
P++ + HRG
Sbjct: 244 PNVAVKHRG 252
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 PHIGLLH 7
P IGLL+
Sbjct: 1458 PQIGLLY 1464
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 PHIGLLH 7
P IGLL+
Sbjct: 1458 PQIGLLY 1464
>sp|RP18_VARV|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus
Query: 2 HIGLLHRGT 10
H+G + RGT
Sbjct: 80 HVGDIVRGT 88
>sp|RP18_VAR67|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus (isolate
Query: 2 HIGLLHRGT 10
H+G + RGT
Sbjct: 80 HVGDIVRGT 88
>sp|RP18_VACCC|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HIGLLHRGT 10
H+G + RGT
Sbjct: 80 HVGDIVRGT 88
>sp|RP18_VACCA|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 HIGLLHRGT 10
H+G + RGT
Sbjct: 80 HVGDIVRGT 88
>sp|RP18_MONPV|DNA-DIRECTED RNA polymerase 18 kDa|Monkeypox virus (MPXV)
Query: 2 HIGLLHRGT 10
H+G + RGT
Sbjct: 80 HVGDIVRGT 88
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 PHIGLLHRG 9
PH LHRG
Sbjct: 419 PHPKNLHRG 427
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 PHIGLLHRG 9
PH LHRG
Sbjct: 419 PHPKNLHRG 427
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 PHIGLLHRG 9
PH LHRG
Sbjct: 419 PHPKNLHRG 427
>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 HIGLLH 7
H+G+LH
Sbjct: 47 HMGMLH 52
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PHIGLLHRG 9
PH LHRG
Sbjct: 419 PHPKNLHRG 427
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PHIGLLHRG 9
PH LHRG
Sbjct: 419 PHPKNLHRG 427
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PHIGLLHRG 9
PH LHRG
Sbjct: 419 PHPKNLHRG 427
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 PHIGLLHRG 9
P++ + HRG
Sbjct: 244 PNVAVKHRG 252
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 5 LLHRGT 10
LLH GT
Sbjct: 679 LLHHGT 684
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 LLHRGT 10
LLH GT
Sbjct: 679 LLHHGT 684
24|Sequence|116|125|LHRGTEKLIE
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 LHRGTEKL 8
+ RGTEKL
Sbjct: 751 IKRGTEKL 758
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 HRGTEKL 8
HRG EK+
Sbjct: 538 HRGEEKM 544
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 LHRGTEKLI 9
H GTE+L+
Sbjct: 36 FHAGTERLL 44
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 LHRGTEKLI 9
H GTE+L+
Sbjct: 36 FHAGTERLL 44
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 LHRGTEKL 8
+ RGTEKL
Sbjct: 751 IKRGTEKL 758
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GTEKLIE 10
GTE+LIE
Sbjct: 1306 GTEQLIE 1312
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GTEKLIE 10
GTE+LIE
Sbjct: 1306 GTEQLIE 1312
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 HRGTEKLIE 10
H+GT KL++
Sbjct: 1382 HKGTIKLLK 1390
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 LHRGTEK 7
LH GT+K
Sbjct: 680 LHHGTKK 686
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LHRGTEK 7
LH GT+K
Sbjct: 680 LHHGTKK 686
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 LHRGTEKL 8
LH+ T+KL
Sbjct: 86 LHKETKKL 93
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 LHRGTEKL 8
LH+ T+KL
Sbjct: 86 LHKETKKL 93
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LHRGTEKL 8
LH+ T+KL
Sbjct: 86 LHKETKKL 93
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LHRGTEKL 8
LH+ T+KL
Sbjct: 86 LHKETKKL 93
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 LHRGTEKL 8
LH+ T+KL
Sbjct: 86 LHKETKKL 93
25|Sequence|121|130|EKLIEYKTYL
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 2 KLIEYKTY 9
KL+EY+ +
Sbjct: 80 KLVEYRNW 87
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 2 KLIEYKTYL 10
K EYK Y+
Sbjct: 351 KATEYKQYM 359
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 1 EKLIEYKTY 9
E ++EY TY
Sbjct: 211 ETVVEYNTY 219
>sp|VE6_HPV69|PROTEIN E6|Human papillomavirus 69
Query: 2 KLIEYKTY 9
K+IEY+ Y
Sbjct: 72 KIIEYRRY 79
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LIEYKTY 9
L++YKT+
Sbjct: 193 LLDYKTF 199
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LIEYKTY 9
L++YKT+
Sbjct: 193 LLDYKTF 199
26|Sequence|126|135|YKTYLQALPY
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 1 YKTYLQALP 9
+KT+LQ +P
Sbjct: 473 FKTFLQGIP 481
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 1 YKTYLQALP 9
+KT+LQ +P
Sbjct: 492 FKTFLQGVP 500
>sp|TEG7_HHV7J|TEGUMENT protein UL51 homolog|Human herpesvirus 7 (strain JI)
Query: 1 YKTYLQALP 9
+KT LQ LP
Sbjct: 59 FKTLLQVLP 67
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YKTYLQALPY 10
Y LQA PY
Sbjct: 377 YDMKLQAAPY 386
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 1 YKTYLQALPY 10
Y LQA PY
Sbjct: 377 YDMKLQAAPY 386
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 YKTYLQALPY 10
Y LQA PY
Sbjct: 377 YDMKLQAAPY 386
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 1 YKTYLQALPY 10
Y LQA PY
Sbjct: 377 YDMKLQAAPY 386
>sp|RP18_VARV|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus
Query: 1 YKTYLQ 6
YKTYL
Sbjct: 32 YKTYLH 37
>sp|RP18_VAR67|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus (isolate
Query: 1 YKTYLQ 6
YKTYL
Sbjct: 32 YKTYLH 37
>sp|RP18_VACCC|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YKTYLQ 6
YKTYL
Sbjct: 32 YKTYLH 37
>sp|RP18_VACCA|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YKTYLQ 6
YKTYL
Sbjct: 32 YKTYLH 37
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 3 TYLQALPY 10
TY+ LPY
Sbjct: 651 TYISNLPY 658
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 3 TYLQALPY 10
TY+ LPY
Sbjct: 652 TYISNLPY 659
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 3 TYLQALPY 10
TY+ LPY
Sbjct: 643 TYISNLPY 650
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 YKTYLQAL 8
Y+TYL+A+
Sbjct: 498 YRTYLKAI 505
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 YKTYLQAL 8
Y+T+ QA+
Sbjct: 461 YRTFTQAI 468
27|Sequence|131|140|QALPYFDRLD
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QALPYFDRLD 10
Q LPY DRL+
Sbjct: 52 QLLPYGDRLE 61
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QALPYFDRLD 10
Q LPY DRL+
Sbjct: 52 QLLPYGDRLE 61
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 4 PYFDRLD 10
PY++RLD
Sbjct: 136 PYYNRLD 142
>sp|UL62_HCMVA|UNCHARACTERIZED protein UL62|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QALPYFDRLD 10
+ALP + RLD
Sbjct: 97 RALPSYCRLD 106
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 4 PYFDRLD 10
P FDR+D
Sbjct: 608 PVFDRID 614
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 PYFDRLD 10
P FDR+D
Sbjct: 608 PVFDRID 614
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 4 PYFDRLD 10
P FDR+D
Sbjct: 608 PVFDRID 614
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PYFDRLD 10
P FDR+D
Sbjct: 608 PVFDRID 614
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 3 LPYFDRLD 10
LP+ DR++
Sbjct: 151 LPFHDRME 158
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 ALPYFDRL 9
A+P+F RL
Sbjct: 1351 AVPHFQRL 1358
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 ALPYFDRL 9
A+P+F RL
Sbjct: 1351 AVPHFQRL 1358
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 ALPYFDRL 9
A+P+F RL
Sbjct: 1351 AVPHFQRL 1358
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 4 PYFDRLD 10
P F+RLD
Sbjct: 155 PLFNRLD 161
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 4 PYFDRLD 10
P F+RLD
Sbjct: 119 PLFNRLD 125
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 4 PYFDRLD 10
P F+RLD
Sbjct: 120 PLFNRLD 126
>sp|US19_HCMVM|TRANSMEMBRANE protein US19|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QALPYFDRL 9
+ +PY +RL
Sbjct: 13 EVVPYLERL 21
>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 QALPYFDRL 9
+ +PY +RL
Sbjct: 13 EVVPYLERL 21
>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QALPYFDRL 9
+ +PY +RL
Sbjct: 13 EVVPYLERL 21
>sp|PRO_ADE40|PROTEASE adenovirus F serotype 40
Query: 1 QALPYFDR 8
Q PYF R
Sbjct: 180 QRSPYFQR 187
28|Sequence|136|145|FDRLDYVSMM
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 2 DRLDYVS 8
+R+DYVS
Sbjct: 127 NRMDYVS 133
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 DRLDYVSMM 10
DR+DY+ +
Sbjct: 2005 DRVDYIDYL 2013
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 DRLDYVSMM 10
DR+DY+ +
Sbjct: 2005 DRVDYIDYL 2013
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 DRLDYVSMM 10
DR+DY+ +
Sbjct: 2004 DRVDYIDYL 2012
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 DRLDYVSMM 10
DR+DY+ +
Sbjct: 2006 DRVDYIDYL 2014
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 DRLDYVSMM 10
DR+DY+ +
Sbjct: 2008 DRVDYIDYL 2016
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 DRLDYVSMM 10
DR+DY+ +
Sbjct: 2008 DRVDYIDYL 2016
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 DRLDYVSMM 10
DR+DY+ +
Sbjct: 2013 DRVDYIDYL 2021
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 2 DRLDYV 7
+RLDYV
Sbjct: 323 ERLDYV 328
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 2 DRLDYV 7
+RLDYV
Sbjct: 323 ERLDYV 328
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 DRLDYVS 8
DRL+Y+S
Sbjct: 1138 DRLEYLS 1144
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 FDRLDYV 7
+RLDY+
Sbjct: 8 LERLDYI 14
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 FDRLDY 6
F+R+DY
Sbjct: 5510 FERIDY 5515
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 1 FDRLDYVSMM 10
FD +Y+S+M
Sbjct: 267 FDARNYISIM 276
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 RLDYVSM 9
R+DY+S+
Sbjct: 1117 RMDYISV 1123
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 1 FDRLDYV 7
FD +DYV
Sbjct: 767 FDEVDYV 773
29|Sequence|141|150|YVSMMCNEQA
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YVSMMCNE 8
YV++ CN+
Sbjct: 274 YVAIFCNQ 281
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YVSMMCNE 8
YV++ CN+
Sbjct: 274 YVAIFCNQ 281
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 1 YVSMMCNEQA 10
Y+S + +EQA
Sbjct: 441 YISHLASEQA 450
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 1 YVSMMCNEQA 10
YVS+ N QA
Sbjct: 424 YVSVSSNHQA 433
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 1 YVSMMCNEQA 10
YVS+ N QA
Sbjct: 424 YVSVSSNHQA 433
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 1 YVSMMCNEQA 10
YVS+ N QA
Sbjct: 424 YVSVSSNHQA 433
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 1 YVSMMCNEQA 10
YVS+ N QA
Sbjct: 424 YVSVSSNHQA 433
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 YVSMMCNEQA 10
YVS+ N QA
Sbjct: 424 YVSVSSNHQA 433
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 1 YVSMMCNEQA 10
YVS+ N QA
Sbjct: 424 YVSVSSNHQA 433
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 1 YVSMMCNEQA 10
YVS+ N QA
Sbjct: 424 YVSVSSNHQA 433
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 YVSMMCNEQA 10
YVS+ N QA
Sbjct: 424 YVSVSSNHQA 433
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 YVSMMCNEQA 10
YVS+ N QA
Sbjct: 424 YVSVSSNHQA 433
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 YVSMMCNEQA 10
YVS+ N QA
Sbjct: 424 YVSVSSNHQA 433
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 YVSMMCNEQA 10
YVS+ N QA
Sbjct: 424 YVSVSSNHQA 433
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 YVSMMCNEQA 10
YVS+ N QA
Sbjct: 424 YVSVSSNHQA 433
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 YVSMMCNEQA 10
YVS+ N QA
Sbjct: 424 YVSVSSNHQA 433
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 1 YVSMMCNEQA 10
YVS+ N QA
Sbjct: 424 YVSVSSNHQA 433
>sp|VE7_HPV29|PROTEIN E7|Human papillomavirus 29
Query: 2 VSMMCNEQ 9
V ++CNEQ
Sbjct: 20 VPLVCNEQ 27
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 YVSMMCN 7
YV ++CN
Sbjct: 2314 YVDVLCN 2320
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 YVSMMCN 7
YV ++CN
Sbjct: 2314 YVDVLCN 2320
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 3 SMMCNEQ 9
S++CN Q
Sbjct: 577 SLVCNSQ 583
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 3 SMMCNEQ 9
S++CN Q
Sbjct: 577 SLVCNSQ 583
30|Sequence|146|155|CNEQAYSLAV
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 EQAYSLAV 10
EQ Y+LAV
Sbjct: 1266 EQLYNLAV 1273
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 NEQAYSL 8
NEQ +SL
Sbjct: 2017 NEQGFSL 2023
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 NEQAYSL 8
NEQ +SL
Sbjct: 2017 NEQGFSL 2023
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 NEQAYSL 8
NEQ +SL
Sbjct: 2017 NEQGFSL 2023
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CNEQAYSL 8
NEQAY +
Sbjct: 840 TNEQAYQM 847
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 CNEQAYSL 8
NEQAY +
Sbjct: 841 TNEQAYQM 848
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CNEQAYSL 8
NEQAY +
Sbjct: 841 TNEQAYQM 848
31|Sequence|151|160|YSLAVEKLLN
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 SLAVEKLLN 10
SLAVE+ LN
Sbjct: 299 SLAVERALN 307
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 SLAVEKLLN 10
SLAVE+ LN
Sbjct: 300 SLAVERALN 308
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 YSLAVEK 7
YSL VEK
Sbjct: 439 YSLPVEK 445
>sp|PG065_MONPV|RNA-BINDING protein OPG065|Monkeypox virus (MPXV)
Query: 3 LAVEKLLN 10
LAV+KLL+
Sbjct: 140 LAVDKLLS 147
>sp|PG065_VAR67|RNA-BINDING protein OPG065|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 LAVEKLL 9
LAV+KLL
Sbjct: 177 LAVDKLL 183
>sp|PG065_VACCC|RNA-BINDING protein OPG065|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LAVEKLL 9
LAV+KLL
Sbjct: 177 LAVDKLL 183
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 AVEKLLN 10
A+E+LLN
Sbjct: 208 AIERLLN 214
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 AVEKLLN 10
A+E+LLN
Sbjct: 208 AIERLLN 214
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 SLAVEKLLN 10
S +EKLLN
Sbjct: 127 SSPIEKLLN 135
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 SLAVEKLLN 10
S +EKLLN
Sbjct: 128 SSPIEKLLN 136
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 SLAVEKLLN 10
S +EKLLN
Sbjct: 127 SSPIEKLLN 135
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 SLAVEKLLN 10
S +EKLLN
Sbjct: 127 SSPIEKLLN 135
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 SLAVEKLLN 10
S +EKLLN
Sbjct: 127 SSPIEKLLN 135
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 SLAVEKLLN 10
S +EKLLN
Sbjct: 127 SSPIEKLLN 135
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 SLAVEKLLN 10
S +EKLLN
Sbjct: 128 SSPIEKLLN 136
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 SLAVEKLLN 10
S +EKLLN
Sbjct: 127 SSPIEKLLN 135
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 SLAVEKLLN 10
S +EKLLN
Sbjct: 127 SSPIEKLLN 135
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 SLAVEKLLN 10
S +EKLLN
Sbjct: 127 SSPIEKLLN 135
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 SLAVEKLLN 10
S +EKLLN
Sbjct: 127 SSPIEKLLN 135
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 SLAVEKLLN 10
S +EKLLN
Sbjct: 127 SSPIEKLLN 135
32|Sequence|156|165|EKLLNIRPPP
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 EKLLNIRPP 9
+KLLNI PP
Sbjct: 376 QKLLNITPP 384
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 EKLLNIRPP 9
+KLLNI PP
Sbjct: 376 QKLLNITPP 384
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 2 KLLNIRPPP 10
K LN+ PPP
Sbjct: 208 KTLNVPPPP 216
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 KLLNIRPPP 10
K LN+ PPP
Sbjct: 208 KTLNVPPPP 216
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 KLLNIRPPP 10
K LN+ PPP
Sbjct: 208 KTLNVPPPP 216
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 2 KLLNIRPPP 10
K LN+ PPP
Sbjct: 208 KTLNVPPPP 216
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 KLLNIRPPP 10
K LN+ PPP
Sbjct: 208 KTLNVPPPP 216
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 2 KLLNIRPPP 10
K LN+ PPP
Sbjct: 208 KTLNVPPPP 216
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 2 KLLNIRPPP 10
K LN+ PPP
Sbjct: 208 KTLNVPPPP 216
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 2 KLLNIRPPP 10
K LN+ PPP
Sbjct: 208 KTLNVPPPP 216
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 KLLNIRPPP 10
K LN+ PPP
Sbjct: 208 KTLNVPPPP 216
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 KLLNIRPP 9
KLLNI PP
Sbjct: 377 KLLNITPP 384
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 KLLNIRPPP 10
K LN+ PPP
Sbjct: 208 KTLNVPPPP 216
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 2 KLLNIRPPP 10
K LN+ PPP
Sbjct: 208 KTLNVPPPP 216
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 KLLNIRPPP 10
K LN+ PPP
Sbjct: 208 KTLNVPPPP 216
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 2 KLLNIRPPP 10
K LN+ PPP
Sbjct: 208 KTLNVPPPP 216
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 1 EKLLNIRP 8
E +LN+RP
Sbjct: 120 EHVLNVRP 127
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 LLNIRPP 9
L NIRPP
Sbjct: 540 LNNIRPP 546
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 EKLLNIRPP 9
EKL+ PP
Sbjct: 517 EKLVEFGPP 525
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 5 NIRPPP 10
NIRP P
Sbjct: 570 NIRPNP 575
33|Sequence|161|170|IRPPPRAQWI
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 IRPPPRAQ 8
IR PPRA+
Sbjct: 6569 IRGPPRAE 6576
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 3 PPPRAQW 9
PPP +W
Sbjct: 74 PPPEPEW 80
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 IRPPP 5
IRPPP
Sbjct: 203 IRPPP 207
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 RPPPRAQW 9
RPPP Q+
Sbjct: 6047 RPPPGEQF 6054
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PRAQWI 10
PRA WI
Sbjct: 209 PRATWI 214
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PRAQWI 10
PRA WI
Sbjct: 209 PRATWI 214
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PRAQWI 10
PRA WI
Sbjct: 209 PRATWI 214
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RPPPRAQ 8
RP PR Q
Sbjct: 43 RPKPRLQ 49
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IRPPPRAQ 8
+ PPPR +
Sbjct: 823 VLPPPRKK 830
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 IRPPPRAQ 8
IRP PR Q
Sbjct: 28 IRPRPRPQ 35
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 PPRAQWI 10
PP WI
Sbjct: 76 PPNGYWI 82
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 IRPPPRAQ 8
IRP PR Q
Sbjct: 28 IRPRPRPQ 35
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 IRPPPRAQ 8
IRP PR Q
Sbjct: 28 IRPRPRPQ 35
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 2 RPPPRAQWI 10
+PPP W+
Sbjct: 154 KPPPSLPWL 162
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IRPPPRAQWI 10
I PR +WI
Sbjct: 200 INTAPRDEWI 209
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IRPPPR 6
+ PPPR
Sbjct: 823 VLPPPR 828
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IRPPPR 6
+ PPPR
Sbjct: 823 VLPPPR 828
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IRPPPR 6
+ PPPR
Sbjct: 823 VLPPPR 828
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IRPPPR 6
+ PPPR
Sbjct: 817 VLPPPR 822
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IRPPPR 6
+ PPPR
Sbjct: 823 VLPPPR 828
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IRPPPR 6
+ PPPR
Sbjct: 823 VLPPPR 828
>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)
Query: 1 IRPPPRAQWI 10
IRP PR ++
Sbjct: 247 IRPDPRQHYV 256
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IRPPP 5
+RPPP
Sbjct: 584 LRPPP 588
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IRPPP 5
+RPPP
Sbjct: 584 LRPPP 588
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IRPPPR 6
+ PPPR
Sbjct: 823 VLPPPR 828
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IRPPPR 6
+ PPPR
Sbjct: 823 VLPPPR 828
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IRPPPR 6
+ PPPR
Sbjct: 823 VLPPPR 828
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 PRAQW 9
PR QW
Sbjct: 3478 PRLQW 3482
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 5 PRAQW 9
PR QW
Sbjct: 65 PRLQW 69
>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12
Query: 1 IRPPPRA 7
+RP PRA
Sbjct: 8 MRPQPRA 14
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 5 PRAQWI 10
PRA W+
Sbjct: 231 PRAHWL 236
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 RPPPRAQWI 10
RPP AQ++
Sbjct: 823 RPPRLAQYL 831
>sp|C_MEASI|PROTEIN C|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 RPPPRAQW 9
RP P A W
Sbjct: 13 RPSPSAHW 20
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 5 PRAQWI 10
PRA W+
Sbjct: 231 PRAHWL 236
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 PPRAQW 9
PPR +W
Sbjct: 25 PPRCRW 30
>sp|C_MEASC|PROTEIN C|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 RPPPRAQW 9
RP P A W
Sbjct: 13 RPSPSAHW 20
>sp|C_MEASA|PROTEIN C|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 RPPPRAQW 9
RP P A W
Sbjct: 13 RPSPSAHW 20
>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)
Query: 1 IRPPPRAQWI 10
IRP PR ++
Sbjct: 207 IRPDPRQHYV 216
>sp|C_MEASE|PROTEIN C|Measles virus (strain Edmonston) (MeV)
Query: 2 RPPPRAQW 9
RP P A W
Sbjct: 13 RPSPSAHW 20
>sp|C_MEASY|PROTEIN C|Measles virus (strain Yamagata-1) (MeV)
Query: 2 RPPPRAQW 9
RP P A W
Sbjct: 13 RPSPSAHW 20
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 5 PRAQWI 10
PRA W+
Sbjct: 232 PRAHWL 237
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 IRPPPRAQ 8
IRP PR Q
Sbjct: 28 IRPRPRPQ 35
>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)
Query: 3 PPPRAQ 8
P PRAQ
Sbjct: 248 PKPRAQ 253
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IRPPPR 6
+ PPPR
Sbjct: 823 VLPPPR 828
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IRPPP 5
+RPPP
Sbjct: 144 LRPPP 148
>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PPPRAQWI 10
P P QW+
Sbjct: 152 PHPHVQWL 159
>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PPPRAQWI 10
P P QW+
Sbjct: 152 PHPHVQWL 159
>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PPPRAQWI 10
P P QW+
Sbjct: 152 PHPHVQWL 159
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 3 PPPRAQWI 10
P P +WI
Sbjct: 632 PEPTTEWI 639
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 3 PPPRAQWI 10
P P +WI
Sbjct: 632 PEPTTEWI 639
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IRPPPR 6
+ PPPR
Sbjct: 802 VLPPPR 807
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 5 PRAQWI 10
PRA W+
Sbjct: 231 PRAHWL 236
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 PPRAQW 9
PPR W
Sbjct: 544 PPRGSW 549
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 5 PRAQWI 10
PRA W+
Sbjct: 231 PRAHWL 236
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 IRPPPRAQW 9
+ PPP +W
Sbjct: 1099 LSPPPHGRW 1107
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 IRPPPRAQW 9
+ PPP +W
Sbjct: 1102 LSPPPHGRW 1110
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 IRPPPRAQW 9
+ PPP +W
Sbjct: 1103 LSPPPHGRW 1111
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 5 PRAQWI 10
PRA W+
Sbjct: 232 PRAHWL 237
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPPRAQ 8
PPPR +
Sbjct: 354 PPPRVE 359
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPPRAQ 8
PPPR +
Sbjct: 354 PPPRVE 359
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 3 PPPRAQWI 10
P P +WI
Sbjct: 632 PEPTTEWI 639
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IRPPPR 6
+ PPPR
Sbjct: 327 VLPPPR 332
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 IRPPPRAQW 9
IRP ++QW
Sbjct: 1754 IRPIVQSQW 1762
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 4 PPRAQW 9
PPR W
Sbjct: 546 PPRGSW 551
34|Sequence|166|175|RAQWIRVLFG
>sp|SCP_HHV11|SMALL capsomere-interacting protein|Human herpesvirus 1 (strain 17)
Query: 2 AQWIRVLFG 10
A W+R FG
Sbjct: 85 AAWLRPAFG 93
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RAQWIR 6
RAQW R
Sbjct: 196 RAQWQR 201
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RAQWIR 6
RAQW R
Sbjct: 196 RAQWQR 201
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 AQWIRVLFG 10
+QW+ +FG
Sbjct: 610 SQWLTNIFG 618
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 AQWIRVLFG 10
+QW+ +FG
Sbjct: 610 SQWLTNIFG 618
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 2 AQWIRVLFG 10
A W R+ FG
Sbjct: 130 ATWGRITFG 138
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 2 AQWIRVLFG 10
A W R+ FG
Sbjct: 130 ATWGRITFG 138
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 2 AQWIRVLFG 10
A W R+ FG
Sbjct: 130 ATWGRITFG 138
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 2 AQWIRVLFG 10
A W R+ FG
Sbjct: 130 ATWGRITFG 138
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 WIRVLFG 10
WI+ FG
Sbjct: 2278 WIKATFG 2284
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 WIRVLFG 10
WI+ FG
Sbjct: 2298 WIKATFG 2304
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 WIRVLFG 10
WI+ FG
Sbjct: 2328 WIKATFG 2334
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 WIRVLFG 10
WI+ FG
Sbjct: 2278 WIKATFG 2284
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 WIRVLFG 10
WI+ FG
Sbjct: 2298 WIKATFG 2304
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 WIRVLFG 10
WI+ FG
Sbjct: 2328 WIKATFG 2334
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 4 WIRVLFG 10
W+ LFG
Sbjct: 1024 WLNALFG 1030
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 4 WIRVLFG 10
W+ LFG
Sbjct: 1028 WLNALFG 1034
>sp|UL139_HCMVM|MEMBRANE glycoprotein UL139|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 WIRVLFG 10
WI VLF
Sbjct: 3 WILVLFA 9
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RAQWIRVL 8
RAQW + L
Sbjct: 334 RAQWSKTL 341
>sp|UL09_HCMVM|MEMBRANE glycoprotein UL9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 WIRVLF 9
WI +LF
Sbjct: 10 WITILF 15
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 4 WIRVLFG 10
W+ LFG
Sbjct: 1015 WLDTLFG 1021
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 2 AQWIRVLFG 10
+ W+ +FG
Sbjct: 228 SDWVTAIFG 236
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 2 AQWIRVLF 9
+ W+++LF
Sbjct: 12 SSWVKLLF 19
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 5 IRVLFG 10
+RVLFG
Sbjct: 724 LRVLFG 729
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 2 AQWIRVLFG 10
A W+ +FG
Sbjct: 266 ADWVVCVFG 274
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 WIRVLFG 10
W+ LFG
Sbjct: 1206 WLLALFG 1212
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 RAQWIRVLFG 10
RA+W + ++G
Sbjct: 3366 RAEWAKNIWG 3375
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 4 WIRVLFG 10
W+ LFG
Sbjct: 222 WVCALFG 228
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 RAQWIRVLFG 10
RA+W + ++G
Sbjct: 3368 RAEWAKNIWG 3377
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 RAQWIRVLFG 10
RA+W + ++G
Sbjct: 3369 RAEWAKNIWG 3378
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 RAQWIRVLFG 10
RA+W + ++G
Sbjct: 3370 RAEWAKNIWG 3379
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 RAQWIRVLFG 10
RA+W + ++G
Sbjct: 3370 RAEWAKNIWG 3379
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 RAQWIRVLFG 10
RA+W + ++G
Sbjct: 3368 RAEWAKNIWG 3377
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 RAQWIRVLFG 10
RA+W + ++G
Sbjct: 3368 RAEWAKNIWG 3377
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 4 WIRVLFG 10
W+ +FG
Sbjct: 243 WVTAIFG 249
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 RAQWIRVLFG 10
RA+W + ++G
Sbjct: 3368 RAEWAKNIWG 3377
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 RAQWIRVLFG 10
RA+W + ++G
Sbjct: 3368 RAEWAKNIWG 3377
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 RAQWIRVLFG 10
RA+W + ++G
Sbjct: 3368 RAEWAKNIWG 3377
35|Sequence|171|180|RVLFGEITRL
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 1 RVLFGEITRL 10
RVLFG++ +L
Sbjct: 725 RVLFGDVLKL 734
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 3 LFGEITR 9
+FGE+TR
Sbjct: 267 IFGEVTR 273
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 RVLFGEITRL 10
R+L+GE R
Sbjct: 128 RILYGEYKRF 137
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 RVLFGEI 7
R++FG+I
Sbjct: 129 RIMFGDI 135
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RVLFGEI 7
R++FG+I
Sbjct: 137 RIMFGDI 143
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 RVLFGEI 7
R++FG+I
Sbjct: 137 RIMFGDI 143
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 RVLFGEITR 9
R GE+TR
Sbjct: 517 RAWLGEVTR 525
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 2 VLFGEITRL 10
+L+G +TR+
Sbjct: 129 ILYGPLTRI 137
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 2 VLFGEITR 9
V+ GE+TR
Sbjct: 539 VVLGELTR 546
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VLFGEITRL 10
V++G +TR+
Sbjct: 129 VIYGPLTRI 137
>sp|PG112_VAR67|LATE protein OPG112|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 LFGEITRL 10
FGE+T L
Sbjct: 15 FFGELTTL 22
>sp|H7_VARV|LATE protein H7|Variola virus
Query: 3 LFGEITRL 10
FGE+T L
Sbjct: 15 FFGELTTL 22
36|Sequence|176|185|EITRLLNHIM
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 EITRLLNHI 9
EI RLLNHI
Sbjct: 81 EIIRLLNHI 89
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 EITRLLNHI 9
EI RLLNHI
Sbjct: 81 EIIRLLNHI 89
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EITRLLNHI 9
EI RLLNHI
Sbjct: 81 EIIRLLNHI 89
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 EITRLLNHI 9
EI RLLNHI
Sbjct: 81 EIIRLLNHI 89
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 EITRLLNHI 9
EI RLLN+I
Sbjct: 81 EIIRLLNYI 89
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 EITRLLNHIM 10
+++++LNH+M
Sbjct: 592 QLSKILNHVM 601
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EITRLLNHIM 10
+++++LNH+M
Sbjct: 592 QLSKILNHVM 601
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EITRLLNHIM 10
+IT LNHI+
Sbjct: 565 QITSELNHIL 574
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EITRLLNHIM 10
+IT LNHI+
Sbjct: 845 QITSELNHIL 854
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EITRLLNHIM 10
+IT LNHI+
Sbjct: 845 QITSELNHIL 854
>sp|UL10_HCMVA|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RLLNHIM 10
RL+NHI+
Sbjct: 3 RLINHIV 9
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EITRLLNHIM 10
+IT LNHI+
Sbjct: 845 QITPELNHIL 854
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EITRLLNHIM 10
+IT LNHI+
Sbjct: 845 QITPELNHIL 854
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 EITRLLNHIM 10
+IT LNHI+
Sbjct: 845 QITPELNHIL 854
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EITRLLNHIM 10
+IT LNHI+
Sbjct: 845 QITPELNHIL 854
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EITRLLNHIM 10
+IT LNHI+
Sbjct: 845 QITPELNHIL 854
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 ITRLLNHIM 10
+TR+ NHI+
Sbjct: 631 LTRVHNHIL 639
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 ITRLLNHIM 10
+TR+ NHI+
Sbjct: 631 LTRVHNHIL 639
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 ITRLLNHIM 10
+TR+ NHI+
Sbjct: 632 LTRVHNHIL 640
>sp|PB1F2_I80A4|PROTEIN PB1-F2|Influenza A virus (strain A/Memphis/4/1980
Query: 2 ITRLLNHIM 10
+TRL++H +
Sbjct: 35 LTRLMDHYL 43
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 ITRLLNHI 9
+TRL +HI
Sbjct: 1545 LTRLAHHI 1552
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 ITRLLNHI 9
+TRL +HI
Sbjct: 1545 LTRLAHHI 1552
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 ITRLLNHI 9
+TRL +HI
Sbjct: 1545 LTRLAHHI 1552
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 ITRLLNHI 9
+TRL +HI
Sbjct: 1545 LTRLAHHI 1552
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 ITRLLNHI 9
+TRL +HI
Sbjct: 1545 LTRLAHHI 1552
37|Sequence|181|190|LNHIMAVTTH
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 3 HIMAVTTH 10
HI+ VT H
Sbjct: 141 HIVTVTPH 148
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 1 LNHIMAVTTH 10
++H+ VT H
Sbjct: 211 VSHVRGVTVH 220
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 1 LNHIMAVTTH 10
L H+++ T H
Sbjct: 117 LKHLLSSTNH 126
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 LNHIMAVTTH 10
L H+++ T H
Sbjct: 117 LKHLLSRTNH 126
38|Sequence|186|195|AVTTHALDLG
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 VTTHALDLG 10
+T+H LD+G
Sbjct: 453 LTSHGLDMG 461
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 AVTTHALDLG 10
AV TH+ D G
Sbjct: 1119 AVCTHSSDFG 1128
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 AVTTHALDLG 10
AV TH+ D G
Sbjct: 1120 AVCTHSSDFG 1129
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 AVTTHALDLG 10
AV TH+ D G
Sbjct: 1119 AVCTHSSDFG 1128
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 1 AVTTHALDLG 10
AV HA+D G
Sbjct: 283 AVRKHAIDAG 292
>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain
Query: 3 TTHALDL 9
T HALD+
Sbjct: 162 TNHALDI 168
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 VTTHALDLG 10
V++H LD G
Sbjct: 599 VSSHRLDTG 607
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 VTTHALDLG 10
V++H LD G
Sbjct: 599 VSSHRLDTG 607
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 VTTHALDLG 10
V++H LD G
Sbjct: 599 VSSHRLDTG 607
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 HALDLG 10
HAL+LG
Sbjct: 915 HALELG 920
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 HALDLG 10
HAL+LG
Sbjct: 914 HALELG 919
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 HALDLG 10
HAL+LG
Sbjct: 911 HALELG 916
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VTTHAL 7
+TTHAL
Sbjct: 92 LTTHAL 97
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VTTHAL 7
+TTHAL
Sbjct: 92 LTTHAL 97
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VTTHAL 7
+TTHAL
Sbjct: 92 LTTHAL 97
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VTTHAL 7
+TTHAL
Sbjct: 92 LTTHAL 97
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VTTHAL 7
+TTHAL
Sbjct: 92 LTTHAL 97
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VTTHAL 7
+TTHAL
Sbjct: 92 LTTHAL 97
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VTTHAL 7
+TTHAL
Sbjct: 92 LTTHAL 97
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VTTHAL 7
+TTHAL
Sbjct: 92 LTTHAL 97
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VTTHAL 7
+TTHAL
Sbjct: 92 LTTHAL 97
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VTTHAL 7
+TTHAL
Sbjct: 92 LTTHAL 97
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 VTTHALDLG 10
V TH+ D G
Sbjct: 1121 VCTHSSDFG 1129
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 3 TTHALD 8
T+HALD
Sbjct: 148 TSHALD 153
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VTTHAL 7
+TTHAL
Sbjct: 92 LTTHAL 97
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VTTHAL 7
+TTHAL
Sbjct: 71 LTTHAL 76
>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate
Query: 3 TTHALDL 9
T HA+D+
Sbjct: 162 TNHAIDI 168
39|Sequence|191|200|ALDLGAMTPF
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 DLGAMTPF 10
DLG TPF
Sbjct: 2339 DLGGGTPF 2346
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 DLGAMTPF 10
DLG TPF
Sbjct: 2341 DLGGGTPF 2348
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 DLGAMTPF 10
DLG TPF
Sbjct: 2340 DLGGGTPF 2347
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 DLGAMTPF 10
DLG TPF
Sbjct: 2339 DLGGGTPF 2346
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 DLGAMTPF 10
DLG TPF
Sbjct: 2341 DLGGGTPF 2348
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 LDLGAMTPF 10
+ LGA++PF
Sbjct: 2743 ITLGAVSPF 2751
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LDLGAMTP 9
L+LG++TP
Sbjct: 105 LELGSITP 112
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 4 LGAMTP 9
LG+MTP
Sbjct: 228 LGSMTP 233
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 4 LGAMTP 9
LG+MTP
Sbjct: 228 LGSMTP 233
>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)
Query: 4 LGAMTP 9
LG+MTP
Sbjct: 228 LGSMTP 233
>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain
Query: 4 LGAMTP 9
LG+MTP
Sbjct: 228 LGSMTP 233
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 4 LGAMTP 9
LG+MTP
Sbjct: 228 LGSMTP 233
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 4 LGAMTP 9
LG+MTP
Sbjct: 228 LGSMTP 233
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 ALDLGA 6
ALDLGA
Sbjct: 1215 ALDLGA 1220
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 ALDLGA 6
ALDLGA
Sbjct: 1216 ALDLGA 1221
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ALDLGAMTP 9
A LGA TP
Sbjct: 17 ACRLGAQTP 25
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ALDLGAMTP 9
A LGA TP
Sbjct: 17 ACRLGAQTP 25
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ALDLGAMTP 9
A LGA TP
Sbjct: 17 ACRLGAQTP 25
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LDLGAMTP 9
LD G +TP
Sbjct: 63 LDFGQLTP 70
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LDLGAMTP 9
LD G +TP
Sbjct: 63 LDFGQLTP 70
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LDLGAMTP 9
LD+ A TP
Sbjct: 949 LDINATTP 956
40|Sequence|196|205|AMTPFFWLFE
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 4 PFFWL 8
PFFW+
Sbjct: 767 PFFWV 771
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 4 PFFWL 8
PFFW+
Sbjct: 767 PFFWV 771
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 4 PFFWL 8
PFFW+
Sbjct: 767 PFFWV 771
>sp|ORF58_HHV8P|PROTEIN ORF58|Human herpesvirus 8 type P
Query: 1 AMTPFFWLF 9
A TPF W F
Sbjct: 21 AATPFLWCF 29
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 AMTPFFWLF 9
+MT F WL+
Sbjct: 898 SMTGFVWLY 906
>sp|BMRF2_EBVA8|PROTEIN BMRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 AMTPFFWLF 9
A TPF W F
Sbjct: 21 ASTPFIWCF 29
>sp|BMRF2_EBVB9|PROTEIN BMRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AMTPFFWLF 9
A TPF W F
Sbjct: 21 ASTPFIWCF 29
>sp|BMRF2_EBVG|PROTEIN BMRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AMTPFFWLF 9
A TPF W F
Sbjct: 21 ASTPFIWCF 29
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 AMTPFFWLF 9
+MT F WL+
Sbjct: 898 SMTGFVWLY 906
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 MTPFFWLFE 10
+T F++LFE
Sbjct: 156 LTMFYYLFE 164
>sp|CAP8_ADE12|PRE-HEXON-LINKING protein VIII|Human adenovirus A serotype 12
Query: 3 TPFFWLFE 10
TP+ W F+
Sbjct: 7 TPYMWSFQ 14
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 MTPFF-WLFE 10
+TP + WLFE
Sbjct: 407 ITPLYSWLFE 416
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 PFFWL 8
P FWL
Sbjct: 763 PLFWL 767
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 PFFWL 8
P FWL
Sbjct: 763 PLFWL 767
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 PFFWL 8
P FWL
Sbjct: 763 PLFWL 767
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 PFFWL 8
P FWL
Sbjct: 764 PLFWL 768
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 PFFWL 8
P FWL
Sbjct: 764 PLFWL 768
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 PFFWL 8
P FWL
Sbjct: 764 PLFWL 768
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 4 PFFWL 8
P FWL
Sbjct: 764 PLFWL 768
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 TPFFW 7
TPF W
Sbjct: 344 TPFLW 348
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 TPFFW 7
TPF W
Sbjct: 344 TPFLW 348
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 2 MTPFFWL 8
M+P+ WL
Sbjct: 661 MSPYRWL 667
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 2 MTPFFWL 8
M+P+ WL
Sbjct: 661 MSPYRWL 667
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 TPFFW 7
TPF W
Sbjct: 344 TPFLW 348
>sp|CAP8_ADE02|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 2
Query: 3 TPFFWLFE 10
TP+ W ++
Sbjct: 7 TPYMWSYQ 14
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 2 MTPFFWL 8
+ PF WL
Sbjct: 161 VNPFVWL 167
>sp|CAP8_ADE05|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 5
Query: 3 TPFFWLFE 10
TP+ W ++
Sbjct: 7 TPYMWSYQ 14
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 2 MTPFFWLF 9
+ PF+W+
Sbjct: 429 IKPFWWIL 436
>sp|CAP8_ADE40|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 40
Query: 3 TPFFWLFE 10
TP+ W ++
Sbjct: 7 TPYMWSYQ 14
>sp|PG082_VACCC|TELOMERE-BINDING protein OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 TPFFWL 8
TPF WL
Sbjct: 94 TPFGWL 99
>sp|PG082_MONPV|TELOMERE-BINDING protein OPG082|Monkeypox virus (MPXV)
Query: 3 TPFFWL 8
TPF WL
Sbjct: 94 TPFGWL 99
>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41
Query: 3 TPFFWLFE 10
TP+ W ++
Sbjct: 7 TPYMWSYQ 14
>sp|PG082_VARV|TELOMERE-BINDING protein OPG082|Variola virus
Query: 3 TPFFWL 8
TPF WL
Sbjct: 94 TPFGWL 99
>sp|PG082_VAR67|TELOMERE-BINDING protein OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 TPFFWL 8
TPF WL
Sbjct: 94 TPFGWL 99
>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 MTPFFWLF 9
M P WLF
Sbjct: 180 MLPILWLF 187
>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 MTPFFWLF 9
M P WLF
Sbjct: 180 MLPILWLF 187
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 402 MRPCFWV 408
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 4 PFFWLFE 10
PFFW E
Sbjct: 832 PFFWRRE 838
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 4 PFFWLFE 10
PFFW E
Sbjct: 832 PFFWRRE 838
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 403 MRPCFWV 409
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 4 PFFWLFE 10
PFFW E
Sbjct: 832 PFFWRRE 838
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 1 AMTPFFWLFE 10
A PF WL +
Sbjct: 338 APPPFNWLIK 347
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 418 MRPCFWV 424
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 399 MRPCFWV 405
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 MTPFFWL 8
M P FW+
Sbjct: 399 MRPCFWV 405
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 FFWLFE 10
+ WLFE
Sbjct: 411 YSWLFE 416
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 5 FFWLFE 10
+ WLFE
Sbjct: 411 YSWLFE 416
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 1 AMTPFFWLFE 10
A PF WL +
Sbjct: 323 APPPFTWLIK 332
41|Sequence|201|210|FWLFEEREKM
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 WLFEEREK 9
WLFE E+
Sbjct: 3180 WLFENAEE 3187
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 2 WLFEEREKM 10
W + RE+M
Sbjct: 270 WFYIRREQM 278
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 WLFEEREK 9
WLFE E+
Sbjct: 3180 WLFENGEE 3187
Query: 1 FWLFEEREK 9
W F REK
Sbjct: 2912 LWAFLAREK 2920
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 WLFEEREK 9
WLFE E+
Sbjct: 3178 WLFENGEE 3185
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 WLFEEREK 9
WLFE E+
Sbjct: 3178 WLFENGEE 3185
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 WLFEEREK 9
WLFE E+
Sbjct: 3178 WLFENGEE 3185
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 WLFEEREK 9
WLFE E+
Sbjct: 3178 WLFENGEE 3185
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 WLFEEREK 9
WLFE E+
Sbjct: 3176 WLFENGEE 3183
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 WLFEEREK 9
WLFE E+
Sbjct: 3179 WLFENGEE 3186
Query: 1 FWLFEEREK 9
W F REK
Sbjct: 2911 LWAFLAREK 2919
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 3 LFEERE 8
LFE+RE
Sbjct: 1002 LFEDRE 1007
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 3 LFEERE 8
LFE+RE
Sbjct: 1002 LFEDRE 1007
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 FWLFEE 6
FW FE+
Sbjct: 170 FWEFEQ 175
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 1 FWLFEEREK 9
FW + REK
Sbjct: 443 FWEVDLREK 451
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 1 FWLFEEREK 9
FW + REK
Sbjct: 443 FWEVDLREK 451
>sp|E3GL_ADE03|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 5 EEREKM 10
EE+EKM
Sbjct: 166 EEKEKM 171
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 WLFEE 6
WLFE+
Sbjct: 413 WLFEK 417
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 WLFEE 6
WLFE+
Sbjct: 413 WLFEK 417
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 WLFEE 6
WLFE+
Sbjct: 413 WLFEK 417
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 WLFEE 6
WLFE+
Sbjct: 413 WLFEK 417
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 WLFEE 6
WLFE+
Sbjct: 413 WLFEK 417
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 WLFEE 6
WLFE+
Sbjct: 413 WLFEK 417
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 WLFEE 6
WLFE+
Sbjct: 413 WLFEK 417
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 WLFEE 6
WLFE+
Sbjct: 413 WLFEK 417
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 WLFEE 6
WLFE+
Sbjct: 413 WLFEK 417
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 1 FWLFEEREK 9
FW + REK
Sbjct: 446 FWNVDLREK 454
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 FWLFEEREK 9
FW +RE+
Sbjct: 2948 FWALVDRER 2956
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 FWLFEEREK 9
FW +RE+
Sbjct: 2955 FWALVDRER 2963
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FWLFEERE 8
++LFEE++
Sbjct: 160 YYLFEEQK 167
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FWLFEERE 8
+ LFEE+E
Sbjct: 155 YLLFEEKE 162
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FWLFEERE 8
+ LFEE+E
Sbjct: 155 YLLFEEKE 162
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 FWLFEEREK 9
W F REK
Sbjct: 2911 LWAFLAREK 2919
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 2 WLFEEREKM 10
WL EER +
Sbjct: 169 WLNEERRGL 177
42|Sequence|206|215|EREKMFEFYE
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 3 EKMFEFYE 10
EK++E YE
Sbjct: 361 EKVYELYE 368
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 1 EREKMFEFY 9
ER+++FE +
Sbjct: 80 ERQEIFELF 88
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 REKMFE 7
RE+MFE
Sbjct: 30 REQMFE 35
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 2 REKMFEFYE 10
++KM E YE
Sbjct: 12 QDKMLELYE 20
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 2 REKMFEFYE 10
+EK+ ++YE
Sbjct: 12 QEKILDYYE 20
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 2 REKMFEFYE 10
++KM E YE
Sbjct: 12 QDKMLELYE 20
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 REKMFEFYE 10
+EKM+E+ E
Sbjct: 365 QEKMYEYVE 373
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 2 REKMFEFYE 10
+EK+ ++YE
Sbjct: 12 QEKILDYYE 20
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 EREKMFE 7
+R+K+FE
Sbjct: 560 QRQKLFE 566
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 EREKMFE 7
+R+K+FE
Sbjct: 560 QRQKLFE 566
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 EREKMFE 7
+R+K+FE
Sbjct: 560 QRQKLFE 566
>sp|U13_HHV6U|UNCHARACTERIZED protein U13|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EREKMFEFY 9
++ +FEFY
Sbjct: 65 DKTVLFEFY 73
>sp|U13_HHV6Z|UNCHARACTERIZED protein U13|Human herpesvirus 6B (strain Z29)
Query: 1 EREKMFEFY 9
++ +FEFY
Sbjct: 66 DKTVLFEFY 74
43|Sequence|211|220|FEFYERVSGA
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 2 EFYERVSG 9
EFYE+V+G
Sbjct: 25 EFYEKVTG 32
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 2 EFYERVSG 9
EFYE+V+G
Sbjct: 25 EFYEKVTG 32
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 FEFYER 6
FEFY R
Sbjct: 484 FEFYHR 489
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 FEFYER 6
FEFY++
Sbjct: 2182 FEFYQK 2187
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 FEFYER 6
FEFY++
Sbjct: 2184 FEFYQK 2189
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 FEFYERV 7
FE +ERV
Sbjct: 1853 FEIWERV 1859
44|Sequence|216|225|RVSGARMHAA
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 RVSGARMHA 9
R+ G RM+A
Sbjct: 3045 RIPGGRMYA 3053
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 RVSGARMHA 9
R+ G RM+A
Sbjct: 3045 RIPGGRMYA 3053
>sp|B4_HHV6Z|PROTEIN B4|Human herpesvirus 6B (strain Z29)
Query: 3 SGARMH 8
SGAR+H
Sbjct: 185 SGARLH 190
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 1 RVSGARMHA 9
++SG+R HA
Sbjct: 769 QLSGSRGHA 777
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 2 VSGARMHA 9
V G R+HA
Sbjct: 300 VCGTRLHA 307
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 2 VSGARMHA 9
V G R+HA
Sbjct: 300 VCGTRLHA 307
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 1 RVSGARMHA 9
++SG+R HA
Sbjct: 773 QLSGSRDHA 781
45|Sequence|221|230|RMHAAYIRPG
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 1 RMHAAYI 7
R HAAYI
Sbjct: 3 RQHAAYI 9
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 2 MHAAYIRPG 10
MH A + PG
Sbjct: 375 MHPAVLTPG 383
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 2 MHAAYIRPG 10
MH A + PG
Sbjct: 376 MHPAVLTPG 384
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 MHAAYI 7
+HAAYI
Sbjct: 3 LHAAYI 8
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 1 RMHAAYI 7
+ HAAYI
Sbjct: 3 KSHAAYI 9
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 RMHAAYI 7
+ HAAYI
Sbjct: 3 KSHAAYI 9
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RMHAAYI 7
+ HAAYI
Sbjct: 3 KSHAAYI 9
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RMHAAYI 7
+ HAAYI
Sbjct: 3 KSHAAYI 9
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 1 RMHAAYI 7
+ HAAYI
Sbjct: 3 KSHAAYI 9
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 RMHAAYIRP 9
+ HA Y RP
Sbjct: 425 KRHAIYKRP 433
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 HAAYIR 8
HA YIR
Sbjct: 365 HAGYIR 370
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 HAAYIR 8
HA YIR
Sbjct: 365 HAGYIR 370
46|Sequence|226|235|YIRPGGVHQD
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 2 IRPGGVHQD 10
+RP G H D
Sbjct: 41 VRPAGAHND 49
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 YIRPGGVHQ 9
Y+RP +HQ
Sbjct: 82 YLRPSDLHQ 90
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 IRPGGVHQD 10
+RPG +QD
Sbjct: 4788 VRPGNFNQD 4796
Query: 1 YIRPGG 6
Y++PGG
Sbjct: 5052 YVKPGG 5057
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 YIRPGG 6
Y+RPGG
Sbjct: 20 YLRPGG 25
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 YIRPGG 6
Y+RPGG
Sbjct: 20 YLRPGG 25
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 YIRPGG 6
Y+RPGG
Sbjct: 20 YLRPGG 25
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 YIRPGG 6
Y+RPGG
Sbjct: 20 YLRPGG 25
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 YIRPGG 6
Y RPGG
Sbjct: 288 YTRPGG 293
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YIRPGG 6
Y++PGG
Sbjct: 5066 YVKPGG 5071
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YIRPGG 6
Y++PGG
Sbjct: 5043 YVKPGG 5048
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 YIRPGG 6
Y++PGG
Sbjct: 5039 YVKPGG 5044
Query: 2 IRPGGVHQD 10
++PG +QD
Sbjct: 4775 VKPGNFNQD 4783
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 YIRPGG 6
Y++PGG
Sbjct: 5077 YVKPGG 5082
Query: 2 IRPGGVHQD 10
++PG +QD
Sbjct: 4813 VKPGNFNQD 4821
Query: 1 YIRPGGV 7
YI+ GGV
Sbjct: 4300 YIQQGGV 4306
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 YIRPGG 6
Y++PGG
Sbjct: 5097 YVKPGG 5102
Query: 2 IRPGGVHQD 10
++PG +QD
Sbjct: 4833 VKPGNFNQD 4841
Query: 1 YIRPGGV 7
YI+ GGV
Sbjct: 4320 YIQQGGV 4326
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 YIRPGG 6
Y++PGG
Sbjct: 5127 YVKPGG 5132
Query: 2 IRPGGVHQD 10
++PG +QD
Sbjct: 4863 VKPGNFNQD 4871
Query: 1 YIRPGGV 7
YI+ GGV
Sbjct: 4350 YIQQGGV 4356
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 YIRPGGVHQ 9
Y++ GGV Q
Sbjct: 3575 YLKSGGVRQ 3583
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 YIRPGGVH 8
Y+R GGV
Sbjct: 3663 YLRSGGVQ 3670
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 1 YIRPGGVH 8
Y+ P G+H
Sbjct: 215 YLSPRGIH 222
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 2 IRPGGVH 8
++PG VH
Sbjct: 165 VQPGAVH 171
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 3 RPGGVHQD 10
+P GVH++
Sbjct: 101 KPPGVHRE 108
>sp|SHDAG_HDVV2|SMALL delta antigen|Hepatitis delta virus genotype III
Query: 3 RPGGVH 8
RPGGV+
Sbjct: 147 RPGGVN 152
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 YIRPGGV 7
YI+ GGV
Sbjct: 4300 YIQQGGV 4306
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 YIRPGGV 7
YI+ GGV
Sbjct: 4320 YIQQGGV 4326
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 YIRPGGV 7
YI+ GGV
Sbjct: 4350 YIQQGGV 4356
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 1 YIRPGGV 7
Y RPG V
Sbjct: 406 YYRPGDV 412
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PGGVH 8
PGG H
Sbjct: 6 PGGAH 10
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PGGVH 8
PGG H
Sbjct: 6 PGGAH 10
>sp|SHDAG_HDVP1|SMALL delta antigen|Hepatitis delta virus genotype III
Query: 3 RPGGVH 8
RPGGV+
Sbjct: 147 RPGGVN 152
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 5 GGVHQD 10
GG+H D
Sbjct: 306 GGLHDD 311
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 5 GGVHQD 10
GG+H D
Sbjct: 306 GGLHDD 311
>sp|LHDAG_HDVV2|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 3 RPGGVH 8
RPGGV+
Sbjct: 147 RPGGVN 152
47|Sequence|231|240|GVHQDLPLGL
>sp|PG034_VAR67|PROTEIN OPG034|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 VHQDLPLG 9
+ QD+PLG
Sbjct: 117 IEQDIPLG 124
>sp|PG034_VACCC|PROTEIN OPG034|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VHQDLPLG 9
+ QD+PLG
Sbjct: 127 IEQDIPLG 134
>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)
Query: 2 VHQDLPLG 9
+ QD+PLG
Sbjct: 117 IEQDIPLG 124
>sp|E312_ADE02|EARLY E3A 12.5 kDa protein|Human adenovirus C serotype 2
Query: 1 GVHQDL 6
G+HQDL
Sbjct: 89 GLHQDL 94
>sp|US10_CHV1|VIRION protein US10 homolog|Cercopithecine herpesvirus 1 (CeHV-1)
Query: 1 GVHQDLPLG 9
GVH+ PL
Sbjct: 9 GVHESCPLA 17
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 5 DLPLGL 10
DLP+GL
Sbjct: 494 DLPIGL 499
>sp|E312_ADE05|EARLY E3A 12.5 kDa protein|Human adenovirus C serotype 5
Query: 1 GVHQDL 6
G+HQDL
Sbjct: 89 GLHQDL 94
>sp|UL81_HCMVA|UNCHARACTERIZED protein UL81|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HQDLPL 8
H DLPL
Sbjct: 6 HYDLPL 11
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 HQDLPLG 9
H DLPL
Sbjct: 321 HGDLPLA 327
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 3 HQDLPLG 9
H DLPL
Sbjct: 321 HGDLPLA 327
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 3 HQDLPLG 9
H DLPL
Sbjct: 321 HGDLPLA 327
>sp|US04_HCMVA|UNCHARACTERIZED protein US4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VHQDLPLG 9
+H D+P+G
Sbjct: 81 LHGDIPIG 88
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 HQDLPLGL 10
+QD+ LGL
Sbjct: 49 NQDMALGL 56
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 1 GVHQDLPLGL 10
G H D+PL L
Sbjct: 951 GPHVDVPLVL 960
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 GVHQDLPLGL 10
G H D+PL L
Sbjct: 924 GPHVDVPLVL 933
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 2 VHQDLPL 8
+H +LPL
Sbjct: 367 IHHNLPL 373
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 GVHQDLPLGL 10
G H D+PL L
Sbjct: 929 GPHVDVPLVL 938
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 2 VHQDLPLGL 10
+ D PLGL
Sbjct: 158 LRSDAPLGL 166
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 2 VHQDLPL 8
+H +LPL
Sbjct: 366 IHHNLPL 372
48|Sequence|236|245|LPLGLMDDIY
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 PLGLMDDIY 10
PLG++ D+Y
Sbjct: 272 PLGILRDLY 280
>sp|M22_HRSVA|PROTEIN M2-2|Human respiratory syncytial virus A
Query: 3 LGLMDDIY 10
LG+++DIY
Sbjct: 76 LGIIEDIY 83
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 1 LPLGLMDDIY 10
LP L+D+IY
Sbjct: 254 LPTLLVDNIY 263
>sp|VP40_MABVR|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 LPLGLMDD 8
LPLG+M +
Sbjct: 84 LPLGIMSN 91
>sp|VP40_MABVA|MATRIX protein VP40|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 LPLGLMDD 8
LPLG+M +
Sbjct: 84 LPLGIMSN 91
>sp|VP40_MABVM|MATRIX protein VP40|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 LPLGLMDD 8
LPLG+M +
Sbjct: 84 LPLGIMSN 91
>sp|VP40_MABVO|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 LPLGLMDD 8
LPLG+M +
Sbjct: 84 LPLGIMSN 91
>sp|VP40_MABVP|MATRIX protein VP40|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 LPLGLMDD 8
LPLG+M +
Sbjct: 84 LPLGIMSN 91
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 2 PLGLMD 7
PLGL+D
Sbjct: 427 PLGLVD 432
>sp|M22_HRSV|PROTEIN M2-2|Human respiratory syncytial virus
Query: 3 LGLMDDIY 10
LG+++DIY
Sbjct: 76 LGVIEDIY 83
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 3 LGLMDD 8
LGL+DD
Sbjct: 499 LGLLDD 504
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 2 PLGLMD 7
PLGL+D
Sbjct: 426 PLGLVD 431
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 3 LGLMDDI 9
LG++DD+
Sbjct: 511 LGMIDDV 517
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 2 PLGLMDD 8
P G++DD
Sbjct: 27 PYGILDD 33
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 1 LPLGLMDDIY 10
L +GL DD Y
Sbjct: 656 LVMGLSDDEY 665
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 1 LPLGLMDDIY 10
+PL + DIY
Sbjct: 390 VPLATVPDIY 399
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 LGLMDDI 9
+GL DDI
Sbjct: 1621 IGLQDDI 1627
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 2 PLGLMDDI 9
P+G DDI
Sbjct: 328 PIGAADDI 335
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 2 PLGLMD 7
PLGL+D
Sbjct: 163 PLGLVD 168
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 2 PLGLMD 7
PLGL+D
Sbjct: 163 PLGLVD 168
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LGLMDDIY 10
L L+D IY
Sbjct: 79 LSLLDSIY 86
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LGLMDDIY 10
L L+D IY
Sbjct: 79 LSLLDSIY 86
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 LGLMDDIY 10
L L+D IY
Sbjct: 79 LSLLDSIY 86
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 3 LGLMDDI 9
LGL DD+
Sbjct: 63 LGLRDDL 69
49|Sequence|241|250|MDDIYQFSKN
>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)
Query: 1 MDDIYQFSKN 10
M +IY F K+
Sbjct: 1 MTEIYDFDKS 10
>sp|PHOSP_HMPVC|PHOSPHOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 DDIYQF 7
DDIYQ
Sbjct: 287 DDIYQL 292
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 1 MDDIYQFSKN 10
M +IY F K+
Sbjct: 1 MTEIYDFDKS 10
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 1 MDDIYQFSKN 10
M +IY F K+
Sbjct: 1 MTEIYDFDKS 10
>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain
Query: 1 MDDIYQFSK 9
+DDI+ FS+
Sbjct: 45 VDDIWNFSE 53
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 1 MDDIYQFSKN 10
M +IY F K+
Sbjct: 1 MTEIYDFDKS 10
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 MDDIYQFSKN 10
M +IY F K+
Sbjct: 1 MTEIYDFDKS 10
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 MDDIYQFSKN 10
M +IY F K+
Sbjct: 1 MTEIYDFDKS 10
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 MDDIYQFSKN 10
++DI+ +KN
Sbjct: 1198 VNDIFSLAKN 1207
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 MDDIYQFSKN 10
++DI+ +KN
Sbjct: 1200 VNDIFSLAKN 1209
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 5 YQFSKN 10
YQFS+N
Sbjct: 150 YQFSEN 155
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 YQFSKN 10
YQFS+N
Sbjct: 150 YQFSEN 155
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 YQFSKN 10
YQFS+N
Sbjct: 150 YQFSEN 155
>sp|PHOSP_RABVB|PHOSPHOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 MDDIYQFSKN 10
+DDI + SKN
Sbjct: 234 LDDIVKESKN 243
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 MDDIYQFSKN 10
+ D+Y + KN
Sbjct: 106 LPDLYDYKKN 115
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 2 DDIYQFSKN 10
DD ++SKN
Sbjct: 173 DDAEKYSKN 181
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 MDDIYQFSKN 10
+ D+Y + KN
Sbjct: 106 LPDLYDYKKN 115
>sp|PAX_I33A0|PROTEIN PA-X|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 MDDIYQFSKN 10
+ D+Y + KN
Sbjct: 106 LPDLYDYKKN 115
>sp|PAX_I77A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 MDDIYQFSKN 10
+ D+Y + KN
Sbjct: 106 LPDLYDYKKN 115
50|Sequence|246|255|QFSKNFSLRL
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 77 FSKDNSIRL 85
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 2 FSKNFSLRL 10
FSK+ S+RL
Sbjct: 100 FSKDNSIRL 108
51|Sequence|251|260|FSLRLDELEE
>sp|ORF35_HHV8P|PROTEIN ORF35|Human herpesvirus 8 type P
Query: 1 FSLRLDELEE 10
++RLD LEE
Sbjct: 108 VAVRLDALEE 117
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 SLRLDELE 9
S+R+D+LE
Sbjct: 2072 SIRIDDLE 2079
>sp|NS7B_SARS|PROTEIN non-structural 7b|Severe acute respiratory syndrome coronavirus
Query: 1 FSLRLDELEE 10
FSL + +LEE
Sbjct: 30 FSLEIQDLEE 39
>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SLRLDELE 9
SLRL+EL+
Sbjct: 43 SLRLEELK 50
52|Sequence|256|265|DELEELLTNN
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 2 ELEELLTN 9
+LEE+LTN
Sbjct: 174 DLEEVLTN 181
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 2 ELEELLTN 9
+LEE+LTN
Sbjct: 174 DLEEVLTN 181
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 1 DELEELL 7
DELEE+L
Sbjct: 135 DELEEIL 141
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 1 DELEELL 7
DELEE+L
Sbjct: 137 DELEEVL 143
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 EELLTNN 10
EELL NN
Sbjct: 1278 EELLRNN 1284
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 EELLTNN 10
EELL NN
Sbjct: 1278 EELLRNN 1284
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 EELLTNN 10
EELL NN
Sbjct: 1278 EELLRNN 1284
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 DELEELLTNN 10
DELE + NN
Sbjct: 38 DELERYIKNN 47
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 DELEELLTNN 10
DELE + NN
Sbjct: 38 DELERYIKNN 47
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 DELEELLTN 9
DEL+E+L N
Sbjct: 286 DELKEILDN 294
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 DELEELLTNN 10
DELE + NN
Sbjct: 38 DELERYIDNN 47
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 DELEELL 7
DELEE++
Sbjct: 571 DELEEVI 577
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 DELEELL 7
DELEE++
Sbjct: 571 DELEEVI 577
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 4 EELLTNN 10
EELLT N
Sbjct: 342 EELLTGN 348
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 4 EELLTNN 10
EELLT N
Sbjct: 342 EELLTGN 348
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 4 EELLTNN 10
EELLT N
Sbjct: 342 EELLTGN 348
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 ELEELLTN 9
+LE+LLT+
Sbjct: 817 DLEQLLTS 824
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 ELEELLTN 9
+LE+LLT+
Sbjct: 822 DLEQLLTS 829
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 2 ELEELLTN 9
+LE+LLT+
Sbjct: 844 DLEQLLTS 851
53|Sequence|261|270|LLTNNRIWRN
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LLTNNRIW 8
+LTNN+ W
Sbjct: 391 ILTNNKPW 398
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LLTNNRIW 8
+LTNN+ W
Sbjct: 391 ILTNNKPW 398
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 LLTNNRIWR 9
L+T N +WR
Sbjct: 2231 LITANLLWR 2239
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LLTNNRIW 8
L+T N+IW
Sbjct: 1335 LITENKIW 1342
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 LLTNNRIWR 9
L+T N +WR
Sbjct: 2226 LITANLLWR 2234
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 LLTNNRIWRN 10
L+ NR W N
Sbjct: 228 LIIQNRTWEN 237
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 LLTNNRIWRN 10
L+ NR W N
Sbjct: 228 LIIQNRTWEN 237
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 TNNRIWRN 10
T NR W N
Sbjct: 936 TQNRAWNN 943
>sp|SPIKE_ADE15|FIBER protein|Human adenovirus D serotype 15
Query: 2 LTNNRI 7
LTNNRI
Sbjct: 88 LTNNRI 93
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LLTNNRIW 8
L+T N IW
Sbjct: 1335 LITENEIW 1342
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 LTNNRIWR 9
TN+ +WR
Sbjct: 625 FTNDGLWR 632
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 4 NNRIWR 9
+NR+W+
Sbjct: 720 SNRVWK 725
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LLTNNRIWR 9
LT N WR
Sbjct: 5823 FLTRNPAWR 5831
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LLTNNRIWR 9
LT N WR
Sbjct: 5800 FLTRNPAWR 5808
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 TNNRIWR 9
+N+R+W+
Sbjct: 3918 SNSRLWQ 3924
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 TNNRIWR 9
+N+R+W+
Sbjct: 3918 SNSRLWQ 3924
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 LLTNNRIW 8
L TN+R W
Sbjct: 2043 LKTNDRKW 2050
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 LLTNNRIW 8
L TN+R W
Sbjct: 2043 LKTNDRKW 2050
>sp|PG040_VAR67|SUPERINFECTION exclusion protein|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LLTNNRIW 8
+L NN +W
Sbjct: 158 MLDNNTLW 165
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 LLTNNRIW 8
L TN+R W
Sbjct: 2043 LKTNDRKW 2050
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 LLTNNRIW 8
L TN+R W
Sbjct: 2043 LKTNDRKW 2050
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 LLTNNRIW 8
L TN+R W
Sbjct: 2043 LKTNDRKW 2050
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 LLTNNRIW 8
L TN+R W
Sbjct: 2043 LKTNDRKW 2050
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 LLTNNRIW 8
L TN+R W
Sbjct: 2043 LKTNDRKW 2050
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 LLTNNRIW 8
L TN+R W
Sbjct: 2043 LKTNDRKW 2050
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 LLTNNRIW 8
L TN+R W
Sbjct: 2043 LKTNDRKW 2050
54|Sequence|266|275|RIWRNRTIDI
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 1 RIWRNRTIDI 10
R W N TID+
Sbjct: 325 RAWENTTIDL 334
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 RIWRNRTIDI 10
R W N TID+
Sbjct: 325 RAWENTTIDL 334
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 1 RIWRNRTIDI 10
R W N T+D+
Sbjct: 325 RSWENTTVDL 334
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 1 RIWRNRTIDI 10
R W N T+D+
Sbjct: 325 RSWENTTVDL 334
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RIWRNR 6
R+WR+R
Sbjct: 2917 RVWRHR 2922
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RIWRNR 6
R+WR+R
Sbjct: 2917 RVWRHR 2922
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RIWRNR 6
R+WR+R
Sbjct: 2917 RVWRHR 2922
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RIWRNR 6
R+WR+R
Sbjct: 2917 RVWRHR 2922
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RIWRNR 6
R+WR+R
Sbjct: 2917 RVWRHR 2922
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 1 RIWRNRTIDI 10
R W N T+D+
Sbjct: 325 RAWDNTTVDL 334
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 1 RIWRNRTIDI 10
R W N +D+
Sbjct: 329 RAWENTVVDL 338
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 RIWRNRTIDI 10
R+W +T DI
Sbjct: 6412 RLWCYKTFDI 6421
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 3 WRNRTI 8
WRN T+
Sbjct: 479 WRNNTV 484
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 RIWRNRTIDI 10
R W N +ID+
Sbjct: 324 RSWDNTSIDL 333
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 5 NRTIDI 10
NRT+DI
Sbjct: 1630 NRTVDI 1635
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 RIWRNRTIDI 10
R W N +D+
Sbjct: 329 RAWENTVVDL 338
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 1 RIWRNRTIDI 10
R W N ++D+
Sbjct: 324 RSWDNTSVDL 333
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 1 RIWRNRTIDI 10
R W N ++D+
Sbjct: 324 RSWDNTSVDL 333
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 IWRNR 6
+WRNR
Sbjct: 522 VWRNR 526
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 IWRNR 6
+WRNR
Sbjct: 522 VWRNR 526
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 3 WRNRT 7
WR+RT
Sbjct: 727 WRHRT 731
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 WRNRTID 9
W N+T+D
Sbjct: 626 WSNKTLD 632
>sp|VE6_HPV60|PROTEIN E6|Human papillomavirus type 60
Query: 2 IWRNR 6
+W+NR
Sbjct: 53 VWKNR 57
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 RIWRNRTIDI 10
+++RN ID+
Sbjct: 6491 KLFRNLNIDV 6500
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 1 RIWRNR 6
+ WRNR
Sbjct: 328 KCWRNR 333
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 3 WRNRTI 8
W++RT+
Sbjct: 1159 WKDRTL 1164
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 IWRNRT 7
+W NRT
Sbjct: 1865 LWMNRT 1870
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 IWRNRTID 9
+W+N T++
Sbjct: 94 MWKNNTVE 101
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 3 WRNRTI 8
W++RT+
Sbjct: 1088 WKDRTL 1093
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 1 RIWRNRTID 9
+ W N+TI+
Sbjct: 450 QTWVNKTIE 458
55|Sequence|271|280|RTIDIGVVTA
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 RTIDIGVV 8
+TIDIG V
Sbjct: 801 KTIDIGNV 808
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TIDIGV 7
T+DIG+
Sbjct: 72 TVDIGI 77
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 1 RTIDIGVV 8
+++D+GVV
Sbjct: 232 KSVDVGVV 239
56|Sequence|276|285|GVVTAEEALN
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 GVVTAEEALN 10
GV+ AE+A N
Sbjct: 3140 GVIEAEDAHN 3149
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 GVVTAEEALN 10
GV+ AE+A N
Sbjct: 3140 GVIEAEDAHN 3149
57|Sequence|281|290|EEALNYGFSG
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 1 EEALNYGFSG 10
+EA+ YG+ G
Sbjct: 173 DEAVKYGYKG 182
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 2 EALNYGFSG 10
EAL YG +G
Sbjct: 176 EALTYGVTG 184
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 EEALNYGF 8
EE+L+Y F
Sbjct: 329 EESLHYAF 336
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 EEALNYGF 8
EE+L+Y F
Sbjct: 327 EESLHYAF 334
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 1 EEALNYG 7
+EAL YG
Sbjct: 173 QEALKYG 179
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 2 EALNYGFS 9
++ NYGF+
Sbjct: 223 DSFNYGFN 230
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 EALNYGFS 9
EAL GFS
Sbjct: 1076 EALRIGFS 1083
>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9
Query: 3 ALNYGF 8
ALNYG
Sbjct: 200 ALNYGL 205
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 2 EALNYGFS 9
EAL GFS
Sbjct: 753 EALRIGFS 760
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 2 EALNYGFSG 10
EAL GF G
Sbjct: 649 EALAEGFDG 657
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 2 EALNYGFSG 10
EAL GF G
Sbjct: 577 EALAEGFDG 585
58|Sequence|286|295|YGFSGVMLRG
>sp|U18_HHV6U|PUTATIVE immediate early glycoprotein|Human herpesvirus 6A (strain
Query: 1 YGFSGVMLRG 10
Y F GVMLR
Sbjct: 100 YYFRGVMLRA 109
>sp|U18_HHV6Z|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 YGFSGVMLRG 10
Y F GVMLR
Sbjct: 100 YYFRGVMLRA 109
>sp|U18_HHV6H|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 YGFSGVMLRG 10
Y F GVMLR
Sbjct: 100 YYFRGVMLRA 109
>sp|NP04_HHV11|NUCLEAR protein UL4|Human herpesvirus 1 (strain 17)
Query: 1 YGFSGVMLRG 10
YG +M+RG
Sbjct: 35 YGTRAIMVRG 44
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 YGFSGV 6
YGF+GV
Sbjct: 688 YGFTGV 693
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 YGFSGV 6
YGF+GV
Sbjct: 688 YGFTGV 693
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 YGFSGV 6
YGF+GV
Sbjct: 688 YGFTGV 693
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 YGFSGV 6
YGF+GV
Sbjct: 688 YGFTGV 693
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 YGFSGV 6
YGF+GV
Sbjct: 782 YGFTGV 787
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 YGFSGV 6
YGF+GV
Sbjct: 782 YGFTGV 787
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 YGFSGV 6
YGF+GV
Sbjct: 823 YGFTGV 828
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 YGFSGV 6
YGF+GV
Sbjct: 823 YGFTGV 828
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 YGFSGV 6
YGF+GV
Sbjct: 818 YGFTGV 823
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 YGFSGV 6
YGF+GV
Sbjct: 818 YGFTGV 823
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 YGFSGV 6
YGF+GV
Sbjct: 818 YGFTGV 823
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 YGFSGV 6
YGF+GV
Sbjct: 818 YGFTGV 823
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 GFSGVMLR 9
GFS ++LR
Sbjct: 1676 GFSAMLLR 1683
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 GFSGVMLR 9
GFS ++LR
Sbjct: 1683 GFSAMLLR 1690
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 GFSGVMLR 9
GFS ++LR
Sbjct: 1683 GFSAMLLR 1690
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 GFSGVMLR 9
GFS ++LR
Sbjct: 1679 GFSSMLLR 1686
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 GFSGVMLR 9
GFS +LR
Sbjct: 1718 GFSAALLR 1725
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 GFSGVMLR 9
GFS +LR
Sbjct: 1717 GFSAALLR 1724
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 GFSGVMLR 9
GFS +LR
Sbjct: 1727 GFSAALLR 1734
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 GFSGVMLR 9
GFS +LR
Sbjct: 1708 GFSAALLR 1715
>sp|VL2_HPV17|MINOR capsid protein L2|Human papillomavirus 17
Query: 1 YGFSGVMLRG 10
YG SGV G
Sbjct: 45 YGSSGVFFGG 54
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 YGFSGVM 7
YGF+GV+
Sbjct: 818 YGFTGVV 824
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 YGFSGVM 7
YGF+GV+
Sbjct: 818 YGFTGVV 824
>sp|KTHY_VARV|THYMIDYLATE kinase|Variola virus
Query: 1 YGFSGV 6
Y FSGV
Sbjct: 94 YAFSGV 99
>sp|KTHY_VAR67|THYMIDYLATE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YGFSGV 6
Y FSGV
Sbjct: 94 YAFSGV 99
>sp|KTHY_VACCT|THYMIDYLATE kinase|Vaccinia virus (strain Tian Tan)
Query: 1 YGFSGV 6
Y FSGV
Sbjct: 94 YAFSGV 99
>sp|KTHY_VACCC|THYMIDYLATE kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YGFSGV 6
Y FSGV
Sbjct: 94 YAFSGV 99
>sp|KTHY_VACCA|THYMIDYLATE kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YGFSGV 6
Y FSGV
Sbjct: 94 YAFSGV 99
>sp|KTHY_MONPV|THYMIDYLATE kinase|Monkeypox virus (MPXV)
Query: 1 YGFSGV 6
Y FSGV
Sbjct: 94 YAFSGV 99
>sp|KTHY_CWPXG|THYMIDYLATE kinase|Cowpox virus (strain GRI-90 /
Query: 1 YGFSGV 6
Y FSGV
Sbjct: 94 YAFSGV 99
>sp|KTHY_CWPXB|THYMIDYLATE kinase|Cowpox virus (strain Brighton Red)
Query: 1 YGFSGV 6
Y FSGV
Sbjct: 94 YAFSGV 99
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 2 GFSGVM 7
GFSGV+
Sbjct: 714 GFSGVI 719
>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GVMLRG 10
G+MLRG
Sbjct: 97 GIMLRG 102
>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GVMLRG 10
G+MLRG
Sbjct: 97 GIMLRG 102
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 1 YGFSGVMLR 9
YG VMLR
Sbjct: 251 YGAGQVMLR 259
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 1 YGFSGVMLR 9
YG VMLR
Sbjct: 251 YGAGQVMLR 259
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 YGFSGVMLR 9
YG VMLR
Sbjct: 251 YGSGQVMLR 259
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 YGFSGVMLR 9
YG VMLR
Sbjct: 251 YGSGQVMLR 259
>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus
Query: 1 YGFSGVMLR 9
+GFS +LR
Sbjct: 190 HGFSAALLR 198
59|Sequence|291|300|VMLRGSGIQW
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 VMLRGSGIQW 10
V G GIQW
Sbjct: 938 VCFEGPGIQW 947
>sp|CAP8_ADE12|PRE-HEXON-LINKING protein VIII|Human adenovirus A serotype 12
Query: 1 VMLRGSGIQ 9
V++RG GIQ
Sbjct: 133 VLIRGKGIQ 141
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 5 GSGIQW 10
G+G+QW
Sbjct: 179 GTGVQW 184
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 5 GSGIQW 10
G+G+QW
Sbjct: 179 GTGLQW 184
>sp|HEX8_ADE03|HEXON-ASSOCIATED protein|Human adenovirus B serotype 3
Query: 1 VMLRGSGIQ 9
+++RG GIQ
Sbjct: 34 LVIRGRGIQ 42
>sp|CAP8_ADE05|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 5
Query: 1 VMLRGSGIQ 9
+ +RG GIQ
Sbjct: 126 LTIRGRGIQ 134
>sp|CAP8_ADE02|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 2
Query: 3 LRGSGIQ 9
+RG GIQ
Sbjct: 128 IRGRGIQ 134
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 5 GSGIQW 10
GSG QW
Sbjct: 519 GSGSQW 524
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 1 VMLRGSGI 8
++LRG G+
Sbjct: 559 ILLRGQGL 566
>sp|CAP8_ADE40|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 40
Query: 1 VMLRGSGIQ 9
+++RG GIQ
Sbjct: 132 LIIRGRGIQ 140
>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41
Query: 1 VMLRGSGIQ 9
+++RG GIQ
Sbjct: 132 LIIRGRGIQ 140
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 LRGSGIQW 10
++GS ++W
Sbjct: 1156 VKGSRVEW 1163
60|Sequence|296|305|SGIQWDLRKT
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 SGIQWDL 7
+GI WDL
Sbjct: 1116 TGISWDL 1122
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 1 SGIQWDL 7
+G+QWD+
Sbjct: 180 TGLQWDV 186
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 2 GIQ---WDLRK 9
GIQ WDLR+
Sbjct: 594 GIQFHPWDLRR 604
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 3 IQWDLRK 9
+ WDL+K
Sbjct: 518 MMWDLKK 524
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 IQWDLRK 9
+ WDL+K
Sbjct: 518 MMWDLKK 524
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 3 IQWDLRK 9
+ WDL+K
Sbjct: 518 MMWDLKK 524
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 IQWDLRK 9
+ WDL+K
Sbjct: 518 MMWDLKK 524
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 3 IQWDLRK 9
+ WDL+K
Sbjct: 518 MMWDLKK 524
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 3 IQWDLRK 9
+ WDL+K
Sbjct: 518 MMWDLKK 524
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SGIQWDLRK 9
SGI W L +
Sbjct: 1106 SGIPWPLER 1114
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 SGIQWDLRK 9
SGI W L +
Sbjct: 1079 SGIPWPLER 1087
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 SGIQWDLRK 9
SGI W L +
Sbjct: 1084 SGIPWPLER 1092
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 4 QWDLRK 9
+WDLR+
Sbjct: 604 RWDLRR 609
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SGIQW 5
SGI+W
Sbjct: 1058 SGIEW 1062
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SGIQW 5
SGI+W
Sbjct: 1058 SGIEW 1062
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SGIQW 5
SGI+W
Sbjct: 1058 SGIEW 1062
>sp|K42_HHV8P|PROTEIN K4.2|Human herpesvirus 8 type P
Query: 1 SGIQWDLR 8
SGI W ++
Sbjct: 61 SGIAWSIK 68
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 SGIQWDL 7
SG+ WD+
Sbjct: 1480 SGVLWDI 1486
61|Sequence|301|310|DLRKTQPYDV
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 RKTQPYDV 10
RKTQP DV
Sbjct: 1125 RKTQPIDV 1132
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 LRKTQPYDV 10
LRK QP+ V
Sbjct: 5745 LRKGQPWSV 5753
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 DLRKTQPYD 9
D+RK +P D
Sbjct: 1067 DIRKRKPID 1075
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 DLRKTQPYD 9
D+RK +P D
Sbjct: 1068 DIRKRKPID 1076
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 4 KTQPY 8
KTQPY
Sbjct: 221 KTQPY 225
>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)
Query: 2 LRKTQPYD 9
L+K++PY+
Sbjct: 16 LKKSKPYN 23
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 LRKTQPYDV 10
L K+QP D+
Sbjct: 417 LSKSQPVDL 425
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 DLRKTQPYDV 10
++R+TQ Y V
Sbjct: 714 EIRRTQSYIV 723
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 DLRKTQPYDV 10
++R+TQ Y V
Sbjct: 713 EIRRTQSYVV 722
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LRKTQPYDV 10
LRK PY V
Sbjct: 184 LRKAPPYFV 192
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LRKTQPYDV 10
LRK PY V
Sbjct: 184 LRKAPPYFV 192
62|Sequence|306|315|QPYDVYDQVE
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 YDVYDQV 9
+DVYD +
Sbjct: 386 FDVYDDI 392
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PYDVYD 7
P DVYD
Sbjct: 757 PLDVYD 762
Query: 2 PYDVYDQV 9
P DVY Q+
Sbjct: 3536 PSDVYQQL 3543
Query: 4 DVYDQV 9
D YDQV
Sbjct: 220 DAYDQV 225
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PYDVYD 7
P DVYD
Sbjct: 757 PLDVYD 762
Query: 2 PYDVYDQV 9
P DVY Q+
Sbjct: 3536 PSDVYQQL 3543
Query: 4 DVYDQV 9
D YDQV
Sbjct: 220 DAYDQV 225
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 YDVYDQV 9
+DVYD +
Sbjct: 386 FDVYDDI 392
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 2 PYDVYD 7
P+D YD
Sbjct: 23 PFDPYD 28
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 3 YDVYD 7
YD+YD
Sbjct: 251 YDIYD 255
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 PYDVYDQV 9
P DVY Q+
Sbjct: 3574 PSDVYQQL 3581
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 PYDVYDQV 9
P DVY Q+
Sbjct: 3594 PSDVYQQL 3601
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 PYDVYDQV 9
P DVY Q+
Sbjct: 3574 PSDVYQQL 3581
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 PYDVYDQV 9
P DVY Q+
Sbjct: 3624 PSDVYQQL 3631
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 PYDVYDQV 9
P DVY Q+
Sbjct: 3594 PSDVYQQL 3601
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 PYDVYDQV 9
P DVY Q+
Sbjct: 3624 PSDVYQQL 3631
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 2 PYDVY 6
PYD+Y
Sbjct: 418 PYDMY 422
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 PYDVY 6
PYD+Y
Sbjct: 418 PYDMY 422
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PYDVY 6
PYD+Y
Sbjct: 418 PYDMY 422
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 2 PYDVY 6
PYD+Y
Sbjct: 418 PYDMY 422
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PYDVY 6
PYD+Y
Sbjct: 418 PYDMY 422
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PYDVY 6
PYD Y
Sbjct: 551 PYDTY 555
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PYDVY 6
PYD Y
Sbjct: 551 PYDTY 555
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 2 PYDVY 6
PYD+Y
Sbjct: 418 PYDMY 422
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 2 PYDVY 6
PYD Y
Sbjct: 551 PYDTY 555
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 2 PYDVY 6
PYD Y
Sbjct: 551 PYDTY 555
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 2 PYDVY 6
PYD Y
Sbjct: 551 PYDTY 555
63|Sequence|311|320|YDQVEFDVPV
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 2 DQVEFDVP 9
DQ+ FDVP
Sbjct: 265 DQLSFDVP 272
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 1 YDQVEFDVP 9
YD VE+ +P
Sbjct: 583 YDNVEYTLP 591
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 YDQVEFDV 8
+D+V FDV
Sbjct: 697 FDEVPFDV 704
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 YDQVEFDV 8
+D+V FDV
Sbjct: 697 FDEVPFDV 704
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 YDQVEFDV 8
+D+V FDV
Sbjct: 697 FDEVPFDV 704
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 YDQVEFDV 8
+D+V FDV
Sbjct: 697 FDEVPFDV 704
>sp|VE6_HPV60|PROTEIN E6|Human papillomavirus type 60
Query: 5 EFDVPV 10
EFD+P+
Sbjct: 18 EFDIPL 23
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 YDQVEFDV 8
+D+V FDV
Sbjct: 698 FDEVPFDV 705
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 5 EFDVPV 10
E+D+PV
Sbjct: 181 EYDIPV 186
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 5 EFDVPV 10
E+D+PV
Sbjct: 181 EYDIPV 186
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 YDQVEFDV 8
+D++ FDV
Sbjct: 698 FDEIPFDV 705
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 DQVEFDVPV 10
DQ+ F++P+
Sbjct: 397 DQLLFNIPL 405
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 YDQVEF 6
Y QVEF
Sbjct: 446 YQQVEF 451
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YDQVEFD 7
YD VEF+
Sbjct: 289 YDYVEFN 295
>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38
Query: 2 DQVEFDVPV 10
D +E D PV
Sbjct: 145 DPIEIDTPV 153
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 YDQVEF 6
Y QVEF
Sbjct: 447 YQQVEF 452
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 4 VEFDVPV 10
++FD+PV
Sbjct: 499 LDFDLPV 505
>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 VEFDVP 9
VEFD P
Sbjct: 171 VEFDTP 176
64|Sequence|316|325|FDVPVGSRGD
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 FDVP--VGSRGD 10
F VP VG+RGD
Sbjct: 213 FTVPRGVGARGD 224
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 FDVPVGSRG 9
FDV G RG
Sbjct: 101 FDVVFGKRG 109
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 FDVPVGSRG 9
FDV G RG
Sbjct: 101 FDVVFGKRG 109
>sp|UL131_HCMVA|UNCHARACTERIZED protein UL131|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VPVGSRG 9
VP G+RG
Sbjct: 35 VPAGNRG 41
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VPVGSRGD 10
VPV RGD
Sbjct: 1140 VPVRRRGD 1147
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 PVGSRGD 10
P G RGD
Sbjct: 290 PYGDRGD 296
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VPVGSRGD 10
+PV RGD
Sbjct: 1140 IPVRRRGD 1147
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VPVGSRGD 10
+PV RGD
Sbjct: 1140 IPVRRRGD 1147
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 VPVGSRGD 10
+PV RGD
Sbjct: 1140 IPVRRRGD 1147
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VPVGSRGD 10
+PV RGD
Sbjct: 1140 IPVRRRGD 1147
Query: 2 DVPVGSR 8
D PVGS+
Sbjct: 2153 DYPVGSQ 2159
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VPVGSRGD 10
+PV RGD
Sbjct: 1140 IPVRRRGD 1147
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VPVGSRGD 10
+PV RGD
Sbjct: 1140 IPVRRRGD 1147
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VPVGSRGD 10
+PV RGD
Sbjct: 1140 IPVRRRGD 1147
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VPVGSRGD 10
+PV RGD
Sbjct: 1140 IPVRRRGD 1147
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 VPVGSRGD 10
+PV RGD
Sbjct: 1140 IPVRRRGD 1147
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 2 DVPVGS 7
DVPVGS
Sbjct: 419 DVPVGS 424
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 VPVGSRGD 10
+PV RGD
Sbjct: 1140 IPVRRRGD 1147
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 2 DVPVGS 7
DVPVGS
Sbjct: 421 DVPVGS 426
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 2 DVPVGS 7
DVPVGS
Sbjct: 421 DVPVGS 426
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 VPVGSRGD 10
+PV RGD
Sbjct: 1140 IPVRRRGD 1147
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 1 FDVPVGSRG 9
FD+P G+ G
Sbjct: 409 FDLPEGNDG 417
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 VPVGSRGD 10
+PV RGD
Sbjct: 1140 IPVRRRGD 1147
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 DVPVGS 7
D+PVG+
Sbjct: 157 DIPVGA 162
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DVPVGS 7
D+PVG+
Sbjct: 157 DIPVGA 162
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 2 DVPVGS 7
D+PVG+
Sbjct: 157 DIPVGA 162
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 1 FDVPVGSR 8
+DVP G R
Sbjct: 453 YDVPEGIR 460
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)
Query: 3 VPVGSRGD 10
+P+ RGD
Sbjct: 132 IPIYKRGD 139
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 DVPVGS 7
DVP+GS
Sbjct: 675 DVPLGS 680
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 DVPVGS 7
DVP+GS
Sbjct: 675 DVPLGS 680
>sp|NRAM_I82A2|NEURAMINIDASE A virus (strain A/Camel/Mongolia/1982
Query: 3 VPVGSRGD 10
+ +GS+GD
Sbjct: 89 IRIGSKGD 96
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 DVPVGS 7
DVP+GS
Sbjct: 675 DVPLGS 680
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 3 VPVGSRGD 10
+P+ RGD
Sbjct: 132 IPIYKRGD 139
>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24
Query: 2 DVPVGSRG 9
D P G RG
Sbjct: 305 DTPRGQRG 312
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 3 VPVGSR 8
+PVGSR
Sbjct: 71 IPVGSR 76
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 1 FDVPVGSR 8
+DVP G R
Sbjct: 453 YDVPEGIR 460
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 3 VPVGSRGD 10
V +GS+GD
Sbjct: 106 VRIGSKGD 113
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 3 VPVGSRGD 10
V +GS+GD
Sbjct: 106 VRIGSKGD 113
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 1 FDVPVGSRG 9
F+VP G+ G
Sbjct: 401 FEVPEGNDG 409
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 3 VPVGSRGD 10
+ +GS+GD
Sbjct: 106 IRIGSKGD 113
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 VPVGSRGD 10
+ +GS+GD
Sbjct: 106 IRIGSKGD 113
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 3 VPVGSRGD 10
V +GS+GD
Sbjct: 106 VRIGSKGD 113
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 VPVGSRGD 10
+ +GS+GD
Sbjct: 106 IRIGSKGD 113
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 FDVPVGSRGD 10
F++P+G D
Sbjct: 210 FEIPLGDPRD 219
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 FDVPVGSRGD 10
F++P+G D
Sbjct: 210 FEIPLGDPRD 219
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 1 FDVPVGSRG 9
F+VP G+ G
Sbjct: 401 FEVPEGNDG 409
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 3 VPVGSRGD 10
+ +GS+GD
Sbjct: 106 IRIGSKGD 113
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 VPVGSRGD 10
+ +GS+GD
Sbjct: 106 IRIGSKGD 113
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 3 VPVGSRGD 10
+ +GS+GD
Sbjct: 86 IRIGSKGD 93
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 VPVGSRGD 10
+ +GS+GD
Sbjct: 106 IRIGSKGD 113
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 VPVGSRGD 10
+ +GS+GD
Sbjct: 87 IRIGSKGD 94
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 3 VPVGSRGD 10
+ +GS+GD
Sbjct: 106 IRIGSKGD 113
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 3 VPVGSRGD 10
+ +GS+GD
Sbjct: 106 IRIGSKGD 113
65|Sequence|321|330|GSRGDCYDRY
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 SRGDCYDRY 10
+R +CYDR+
Sbjct: 5648 ARVECYDRF 5656
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 RGDCYDRY 10
R DCYD++
Sbjct: 5673 RVDCYDKF 5680
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 RGDCYDRY 10
R DCYD++
Sbjct: 5693 RVDCYDKF 5700
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 RGDCYDRY 10
R DCYD++
Sbjct: 5723 RVDCYDKF 5730
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 5 DCYDR 9
DCYDR
Sbjct: 28 DCYDR 32
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 GSRGDCYDRY 10
GS G C D Y
Sbjct: 1286 GSPGSCTDHY 1295
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 GSRGDCYDR 9
G R D YDR
Sbjct: 654 GDRCDLYDR 662
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 GSRGDCYDRY 10
G+ G C D Y
Sbjct: 1286 GTPGSCTDHY 1295
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 DCYDRY 10
DCY+R+
Sbjct: 122 DCYERF 127
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 5 DCYDRY 10
DCY+R+
Sbjct: 122 DCYERF 127
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 RGDCYDRY 10
R +CYD++
Sbjct: 5635 RVECYDKF 5642
Query: 4 GDCY 7
GDCY
Sbjct: 1339 GDCY 1342
>sp|U22_HHV6Z|PROTEIN U22|Human herpesvirus 6B (strain Z29)
Query: 3 RGDCY 7
RGDC+
Sbjct: 148 RGDCF 152
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 GSRGDCYDRY 10
G R CY Y
Sbjct: 552 GERSRCYSLY 561
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 GSRGDCYDRY 10
G R CY Y
Sbjct: 548 GERSRCYSLY 557
>sp|U22_HHV6U|GLYCOPROTEIN U22|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 RGDCY 7
RGDC+
Sbjct: 148 RGDCF 152
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GSRGDCYDRY 10
G+R C DR+
Sbjct: 99 GTRVPCVDRW 108
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GSRGDCYDRY 10
G+R C DR+
Sbjct: 99 GTRVPCVDRW 108
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 GSRGDCYDRY 10
G R CY Y
Sbjct: 549 GERSRCYSVY 558
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 1 GSRGDCYDRY 10
G R CY R+
Sbjct: 247 GKREQCYARH 256
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 1 GSRGDCYDR 9
GSR CY R
Sbjct: 452 GSRYACYFR 460
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 SRGDCYDRY 10
+R +C+D++
Sbjct: 5662 ARVECFDKF 5670
Query: 5 DCYD 8
DCYD
Sbjct: 4873 DCYD 4876
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 5 DCYDRY 10
DC DR+
Sbjct: 106 DCKDRF 111
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 SRGDCYDRY 10
+R +C+D++
Sbjct: 5639 ARVECFDKF 5647
Query: 5 DCYD 8
DCYD
Sbjct: 4850 DCYD 4853
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 RGDCYD 8
+GDC++
Sbjct: 2080 KGDCFN 2085
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 1 GSRGDCYDR 9
G+RG Y R
Sbjct: 304 GARGTMYTR 312
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 GDCY 7
GDCY
Sbjct: 1339 GDCY 1342
>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55
Query: 1 GSRGDCYDR 9
G RG Y R
Sbjct: 301 GQRGSMYTR 309
>sp|VL2_HPV44|MINOR capsid protein L2|Human papillomavirus 44
Query: 1 GSRGDCYDR 9
G RG Y R
Sbjct: 301 GQRGSMYTR 309
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 GSRGDCYDR 9
G RG Y R
Sbjct: 302 GQRGSMYTR 310
>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11
Query: 1 GSRGDCYDR 9
G RG Y R
Sbjct: 299 GQRGSMYTR 307
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 RGDCYDRY 10
RGDC Y
Sbjct: 1168 RGDCGTPY 1175
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 DCYD 8
DCYD
Sbjct: 4338 DCYD 4341
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 5 DCYD 8
DCYD
Sbjct: 684 DCYD 687
>sp|K42_HHV8P|PROTEIN K4.2|Human herpesvirus 8 type P
Query: 1 GSRGDC 6
G RG+C
Sbjct: 120 GGRGEC 125
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 SRGDCYDR 9
S G CY R
Sbjct: 570 SPGRCYSR 577
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SRGDCYDR 9
S G CY R
Sbjct: 570 SPGRCYSR 577
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SRGDCYDR 9
S G CY R
Sbjct: 569 SPGRCYSR 576
>sp|TAT_HV2SB|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 4 GDCYDR 9
G CYDR
Sbjct: 73 GICYDR 78
66|Sequence|326|335|CYDRYLCRVE
>sp|Z_LYCVA|RING finger protein Z|Lymphocytic choriomeningitis virus (strain
Query: 1 CYDRYLCR 8
C+D YLCR
Sbjct: 45 CHDHYLCR 52
>sp|PG164_VACCC|PROTEIN OPG164|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CYDRYLCR 8
CY Y+CR
Sbjct: 19 CYILYICR 26
>sp|PG164_MONPV|PROTEIN OPG164|Monkeypox virus (MPXV)
Query: 1 CYDRYLCR 8
CY Y+CR
Sbjct: 27 CYILYICR 34
>sp|Z_LYCVP|RING finger protein Z|Lymphocytic choriomeningitis virus (strain
Query: 1 CYDRYLCR 8
C+D YLCR
Sbjct: 24 CHDHYLCR 31
>sp|PG164_VAR67|PROTEIN OPG164|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CYDRYLCR 8
CY Y+CR
Sbjct: 19 CYILYICR 26
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CYDRYLCRV 9
CY+R++C V
Sbjct: 123 CYERFVCPV 131
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 CYDRYLCRV 9
CY+R++C V
Sbjct: 123 CYERFVCPV 131
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 YDRYLCRVE 10
YD+YL R++
Sbjct: 6 YDQYLHRIQ 14
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 CYDRYLCRVE 10
C+ RY C E
Sbjct: 2045 CFKRYACSGE 2054
>sp|Z_LYCVT|RING finger protein Z|Lymphocytic choriomeningitis virus (strain
Query: 1 CYDRYLCR 8
C+D YLCR
Sbjct: 45 CHDHYLCR 52
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 3 DRYLCR 8
D+Y+CR
Sbjct: 243 DKYVCR 248
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 YDRYLCR 8
Y+ YLC+
Sbjct: 413 YNNYLCK 419
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 YDRYLCR 8
Y+ YLC+
Sbjct: 413 YNNYLCK 419
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 YDRYLCR 8
Y+ YLC+
Sbjct: 413 YNNYLCK 419
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 CYDRYLCRVE 10
C+ +Y C E
Sbjct: 2129 CFKKYACNQE 2138
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 CYDRYLCRVE 10
C+ +Y C E
Sbjct: 2129 CFKKYACNQE 2138
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 CYDRYLCRVE 10
C+ +Y C E
Sbjct: 2130 CFKKYACNQE 2139
>sp|PG034_VACCC|PROTEIN OPG034|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YDRYLCR 8
Y+R+ CR
Sbjct: 177 YNRFFCR 183
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 4 RYLCRVE 10
RY+CR E
Sbjct: 469 RYICRDE 475
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 2 YDRYLCRVE 10
YD + RVE
Sbjct: 210 YDMFFARVE 218
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 YDRYL 6
YDRYL
Sbjct: 883 YDRYL 887
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 YDRYL 6
YDRYL
Sbjct: 883 YDRYL 887
>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)
Query: 2 YDRYLCR 8
Y+R+ CR
Sbjct: 167 YNRFFCR 173
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 YDRYL 6
YDRYL
Sbjct: 883 YDRYL 887
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CYDRYLCRVE 10
C+ +Y C E
Sbjct: 2113 CFKKYACNDE 2122
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 5 YLCRVE 10
Y CRVE
Sbjct: 19 YACRVE 24
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 YLCRVE 10
Y CRVE
Sbjct: 19 YACRVE 24
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 4 RYLCRVE 10
RY+CR E
Sbjct: 468 RYICRDE 474
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CYDRYLCRVE 10
C+ +Y C E
Sbjct: 2112 CFKKYACNNE 2121
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CYDRYLCRVE 10
C+ +Y C E
Sbjct: 2112 CFKKYACNNE 2121
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CYDRYLCRVE 10
C+ +Y C E
Sbjct: 2118 CFKKYACNNE 2127
>sp|PG034_VAR67|PROTEIN OPG034|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 YDRYLCR 8
Y+R+ CR
Sbjct: 167 YNRFFCR 173
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CYDRYLCRVE 10
C+ +Y C E
Sbjct: 2090 CFKKYACNDE 2099
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CYDRYLCRVE 10
C+ +Y C E
Sbjct: 2104 CFKKYACNNE 2113
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 YDRYLCRVE 10
YD + RVE
Sbjct: 210 YDMFFSRVE 218
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 YDRYLCRVE 10
YD + RVE
Sbjct: 210 YDMFFSRVE 218
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 CYDRYLCRVE 10
C+ +Y C E
Sbjct: 2086 CFKKYACNDE 2095
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CYDRYLCRVE 10
C+ +Y C E
Sbjct: 2093 CFKKYACNDE 2102
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 LCRVE 10
LCRVE
Sbjct: 1689 LCRVE 1693
Query: 1 CYDRYL 6
C+ RYL
Sbjct: 381 CHQRYL 386
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 LCRVE 10
LCRVE
Sbjct: 1689 LCRVE 1693
Query: 1 CYDRYL 6
C+ RYL
Sbjct: 381 CHQRYL 386
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 LCRVE 10
LCRVE
Sbjct: 1689 LCRVE 1693
Query: 1 CYDRYL 6
C+ RYL
Sbjct: 381 CHQRYL 386
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 LCRVE 10
LCRVE
Sbjct: 1689 LCRVE 1693
Query: 1 CYDRYL 6
C+ RYL
Sbjct: 381 CHQRYL 386
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 2 YDRYLCRVE 10
YD + R+E
Sbjct: 210 YDMFFSRIE 218
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 2 YDRYLCRVE 10
YD + R+E
Sbjct: 210 YDMFFSRIE 218
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 YDRYLCRVE 10
YD + R+E
Sbjct: 210 YDMFFSRIE 218
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 YDRYLCRVE 10
YD + R+E
Sbjct: 210 YDMFFSRIE 218
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 2 YDRYLCRVE 10
YD + R+E
Sbjct: 210 YDMFFSRIE 218
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 YDRYLCRVE 10
YD + R+E
Sbjct: 210 YDMFFSRIE 218
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 2 YDRYLCRVE 10
YD + R+E
Sbjct: 210 YDMFFSRIE 218
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 2 YDRYLCRVE 10
YD + R+E
Sbjct: 210 YDMFFSRIE 218
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 YDRYLCRVE 10
YD + R+E
Sbjct: 210 YDMFFSRIE 218
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 YDRYLCRVE 10
YD + R+E
Sbjct: 210 YDMFFSRIE 218
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 YDRYLCRVE 10
YD + R+E
Sbjct: 210 YDMFFSRIE 218
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 2 YDRYLCRVE 10
YD + R+E
Sbjct: 210 YDMFFSRIE 218
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 LCRVE 10
LCRVE
Sbjct: 1689 LCRVE 1693
Query: 1 CYDRYL 6
C+ RYL
Sbjct: 381 CHQRYL 386
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 2 YDRYLC 7
YD+Y C
Sbjct: 344 YDKYDC 349
>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 YLCRVE 10
YLCR++
Sbjct: 102 YLCRMK 107
>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 YLCRVE 10
YLCR++
Sbjct: 102 YLCRMK 107
>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 YLCRVE 10
YLCR++
Sbjct: 102 YLCRMK 107
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 DRYLCRVE 10
D+Y+C V+
Sbjct: 199 DQYMCGVD 206
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 CYDRYLCRVE 10
C RY+ +VE
Sbjct: 961 CKKRYIGKVE 970
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 CYDRYLCRVE 10
C RY+ +VE
Sbjct: 961 CKKRYIGKVE 970
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 CYDRYL 6
C+ RYL
Sbjct: 381 CHQRYL 386
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 CYDRYL 6
C+ RYL
Sbjct: 381 CHQRYL 386
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 CYDRYL 6
C+ RYL
Sbjct: 381 CHQRYL 386
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 YDRYLC 7
YD Y+C
Sbjct: 108 YDFYVC 113
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 YDRYLC 7
YD Y+C
Sbjct: 108 YDFYVC 113
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 YDRYLC 7
YD Y+C
Sbjct: 108 YDFYVC 113
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 CYDRYL 6
C+ RYL
Sbjct: 381 CHQRYL 386
>sp|Z_GTOVV|RING finger protein Z|Guanarito mammarenavirus (isolate
Query: 1 CYDRYLC 7
C D YLC
Sbjct: 53 CSDHYLC 59
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 3 DRYLCRVE 10
D+Y+C V+
Sbjct: 199 DQYMCGVD 206
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 CYDRYLCRVE 10
C+ ++ C E
Sbjct: 2090 CFKKFACNQE 2099
67|Sequence|331|340|LCRVEEMRQS
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 LCRVEEMR 8
LC +EE++
Sbjct: 777 LCEIEELK 784
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEEMRQ 9
++EE+RQ
Sbjct: 787 KIEELRQ 793
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEEMRQ 9
++EE+RQ
Sbjct: 788 KIEELRQ 794
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEEMRQ 9
++EE+RQ
Sbjct: 788 KIEELRQ 794
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEEMRQ 9
++EE+RQ
Sbjct: 790 KIEELRQ 796
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 CRVEEM 7
CRVE++
Sbjct: 21 CRVEDL 26
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CRVEEM 7
CRVE++
Sbjct: 21 CRVEDL 26
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEEMRQ 9
++EE+RQ
Sbjct: 792 KIEELRQ 798
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEEMRQ 9
++EE+RQ
Sbjct: 788 KIEELRQ 794
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEEMRQ 9
++EE+RQ
Sbjct: 800 KIEELRQ 806
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEEMRQ 9
++EE+RQ
Sbjct: 800 KIEELRQ 806
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEEMRQ 9
++EE+RQ
Sbjct: 788 KIEELRQ 794
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVEEMRQ 9
++EE+RQ
Sbjct: 800 KIEELRQ 806
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CRVEEM 7
CR+EE+
Sbjct: 343 CRLEEL 348
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CRVEEM 7
CR+EE+
Sbjct: 343 CRLEEL 348
68|Sequence|336|345|EMRQSLRIIA
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 MRQSLRII 9
+RQSLR++
Sbjct: 973 LRQSLRLL 980
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 MRQSLRII 9
+RQSLR++
Sbjct: 973 LRQSLRLL 980
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 MRQSLRII 9
+RQSLR++
Sbjct: 973 LRQSLRLL 980
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 EMRQSLRI 8
++RQS+RI
Sbjct: 301 KIRQSIRI 308
>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 RQSLRIIA 10
RQ+LRI A
Sbjct: 49 RQNLRIAA 56
69|Sequence|341|350|LRIIAQCLNK
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 RIIAQCLNK 10
RI+ QC N+
Sbjct: 273 RILEQCGNR 281
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 6 QCLNK 10
QCLNK
Sbjct: 279 QCLNK 283
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 IAQCLNK 10
IAQCL +
Sbjct: 1875 IAQCLQR 1881
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 IAQCLNK 10
IAQCL +
Sbjct: 1875 IAQCLQR 1881
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LRIIAQCL 8
LR++ QC+
Sbjct: 661 LRLLTQCI 668
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 IIAQCLNK 10
+IA CL K
Sbjct: 1844 VIANCLRK 1851
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 RIIAQCL 8
RI+++CL
Sbjct: 263 RIVSRCL 269
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 RIIAQCL 8
RI+++CL
Sbjct: 262 RIVSRCL 268
>sp|REV_HV1VI|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 2 RIIAQCLNK 10
RI++ CL +
Sbjct: 58 RILSSCLGR 66
>sp|REV_HV193|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 2 RIIAQCLNK 10
RI++ CL +
Sbjct: 58 RILSSCLGR 66
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 RIIAQCLN 9
RI+ +C+N
Sbjct: 1547 RILRRCIN 1554
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 RIIAQCLN 9
RI+ +C+N
Sbjct: 1547 RILRRCIN 1554
>sp|REV_HV1U4|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 2 RIIAQCLNK 10
RI++ CL +
Sbjct: 58 RILSDCLGR 66
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 RIIAQCLN 9
RI+ +C+N
Sbjct: 1547 RILRRCIN 1554
>sp|REV_HV1S9|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 2 RIIAQCLNK 10
RI++ CL +
Sbjct: 58 RILSSCLGR 66
70|Sequence|346|355|QCLNKMPPGE
>sp|A53_VACCC|TRUNCATED secreted TNF-receptor-like protein A53|Vaccinia virus (strain
Query: 1 QCLNKMPPGE 10
QC N+ PPGE
Sbjct: 49 QCCNRCPPGE 58
>sp|TEG7_HHV7J|TEGUMENT protein UL51 homolog|Human herpesvirus 7 (strain JI)
Query: 1 QCLNKMPP 8
+CLN PP
Sbjct: 81 RCLNNCPP 88
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 5 KMPPGE 10
KMPP E
Sbjct: 1737 KMPPSE 1742
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 QCLNKMPPGE 10
+ + K PPGE
Sbjct: 6034 KAVAKAPPGE 6043
>sp|NSP4_ROTGA|NON-STRUCTURAL glycoprotein 4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 QCLNKM 6
QCL+KM
Sbjct: 109 QCLDKM 114
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 KMPPGE 10
K PPGE
Sbjct: 6076 KAPPGE 6081
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 KMPPGE 10
K PPGE
Sbjct: 6126 KAPPGE 6131
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 CLNKMPP 8
CL++ PP
Sbjct: 383 CLSQTPP 389
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CLNKMPP 8
CL++ PP
Sbjct: 383 CLSQTPP 389
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CLNKMPP 8
CL++ PP
Sbjct: 384 CLSQTPP 390
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 LNKMPP 8
L+KMPP
Sbjct: 413 LSKMPP 418
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 3 LNKMPPGE 10
L K PPGE
Sbjct: 426 LAKCPPGE 433
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 KMPPGE 10
K PPGE
Sbjct: 5706 KSPPGE 5711
>sp|GO_HHV7J|GLYCOPROTEIN U47 homolog|Human herpesvirus 7 (strain JI)
Query: 2 CLNKMP 7
C+NK+P
Sbjct: 147 CVNKIP 152
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 LNKMPPGE 10
LN++PP +
Sbjct: 1978 LNQLPPNK 1985
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 LNKMPPGE 10
L K PPGE
Sbjct: 435 LAKCPPGE 442
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 LNKMPP 8
LN++PP
Sbjct: 1978 LNQLPP 1983
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 LNKMPP 8
LN++PP
Sbjct: 1978 LNQLPP 1983
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 3 LNKMPPGE 10
L K PPGE
Sbjct: 435 LAKCPPGE 442
>sp|VP24_EBOZM|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 LNKMPPG 9
+N+M PG
Sbjct: 209 MNRMKPG 215
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 LNKMPP 8
+N MPP
Sbjct: 211 INSMPP 216
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 5 KMPPG 9
K+PPG
Sbjct: 439 KLPPG 443
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 5 KMPPG 9
K+PPG
Sbjct: 367 KLPPG 371
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 QCLNKMPPG 9
QC N PG
Sbjct: 1152 QCSNAKQPG 1160
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 QCLNKMPPG 9
QC N PG
Sbjct: 1152 QCSNAKQPG 1160
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 5 KMPPG 9
K+PPG
Sbjct: 437 KLPPG 441
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QCLNKMP 7
QC K+P
Sbjct: 617 QCFRKLP 623
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QCLNKMP 7
QC K+P
Sbjct: 617 QCFRKLP 623
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QCLNKMP 7
QC K+P
Sbjct: 617 QCFRKLP 623
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QCLNKMP 7
QC K+P
Sbjct: 617 QCFRKLP 623
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QCLNKMP 7
QC K+P
Sbjct: 617 QCFRKLP 623
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QCLNKMP 7
QC K+P
Sbjct: 617 QCFRKLP 623
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QCLNKMP 7
QC K+P
Sbjct: 612 QCFRKLP 618
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 3 LNKMPPGE 10
L K PPG+
Sbjct: 430 LAKCPPGD 437
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 QCLNKMP 7
QC K+P
Sbjct: 616 QCFRKLP 622
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 QCLNKMP 7
QC K+P
Sbjct: 617 QCFRKLP 623
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 3 LNKMPPGE 10
L K PPG+
Sbjct: 430 LAKCPPGD 437
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 QCLNKMP 7
QC K+P
Sbjct: 616 QCFRKLP 622
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 3 LNKMPPGE 10
L K PPG+
Sbjct: 430 LAKCPPGD 437
71|Sequence|351|360|MPPGEIKVDD
>sp|NSP3_ROTH7|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 3 PGEIKVD 9
PGEIK D
Sbjct: 252 PGEIKTD 258
Query: 4 GEIKVDD 10
GE++VDD
Sbjct: 147 GEVEVDD 153
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 MPPGEIK 7
+PPGE++
Sbjct: 1937 LPPGELR 1943
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 MPPGEIK 7
+PPGE++
Sbjct: 1937 LPPGELR 1943
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 MPPGEIK 7
+PPGE++
Sbjct: 1937 LPPGELR 1943
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 2 PPGEIKVDD 10
P GE+K DD
Sbjct: 246 PGGEVKNDD 254
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 2 PPGEIKVDD 10
P GE+K DD
Sbjct: 246 PGGEVKNDD 254
>sp|NSP3_ROTWI|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 4 GEIKVDD 10
GE++VDD
Sbjct: 150 GEVEVDD 156
>sp|NSP3_ROTHW|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 4 GEIKVDD 10
GE++VDD
Sbjct: 150 GEVEVDD 156
>sp|NSP3_ROTHT|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 4 GEIKVDD 10
GE++VDD
Sbjct: 150 GEVEVDD 156
>sp|NSP3_ROTHS|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 4 GEIKVDD 10
GE++VDD
Sbjct: 150 GEVEVDD 156
>sp|NSP3_ROTHP|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 4 GEIKVDD 10
GE++VDD
Sbjct: 147 GEVEVDD 153
>sp|NSP3_ROTHL|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 4 GEIKVDD 10
GE++VDD
Sbjct: 150 GEVEVDD 156
>sp|NSP3_ROTHD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 4 GEIKVDD 10
GE++VDD
Sbjct: 150 GEVEVDD 156
>sp|NSP3_ROTH6|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 4 GEIKVDD 10
GE++VDD
Sbjct: 150 GEVEVDD 156
>sp|NSP3_ROTH3|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 4 GEIKVDD 10
GE++VDD
Sbjct: 150 GEVEVDD 156
>sp|NSP3_ROT41|NON-STRUCTURAL protein 3|Rotavirus A (isolate
Query: 4 GEIKVDD 10
GE++VDD
Sbjct: 150 GEVEVDD 156
>sp|NSP3_ROTAM|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 4 GEIKVDD 10
GE++VDD
Sbjct: 147 GEVEVDD 153
>sp|NSP3_ROTAD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 4 GEIKVDD 10
GE++VDD
Sbjct: 147 GEVEVDD 153
>sp|NSP3_ROTHK|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 4 GEIKVDD 10
GE++VDD
Sbjct: 150 GEVEVDD 156
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 MPPGEIK 7
+PPG+I+
Sbjct: 221 LPPGQIR 227
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 PGEIKVDD 10
P EI +DD
Sbjct: 33 PNEIDLDD 40
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 PGEIKVDD 10
P EI +DD
Sbjct: 33 PNEIDLDD 40
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 MPPGEIK 7
+PPG+I+
Sbjct: 221 LPPGQIR 227
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 MPPGEIK 7
MP GE++
Sbjct: 738 MPSGEVR 744
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 MPPGEIK 7
+PPG+I+
Sbjct: 219 IPPGQIR 225
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PGEIKVD 9
PG++K+D
Sbjct: 664 PGQLKLD 670
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 MPPGEIK 7
+PPG+I+
Sbjct: 219 IPPGQIR 225
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PGEIKVD 9
PG++K+D
Sbjct: 664 PGQLKLD 670
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 MPPGEIK 7
+PPG+I+
Sbjct: 219 IPPGQIR 225
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 MPPGEIKVDD 10
+P G I VD+
Sbjct: 6922 LPSGSILVDN 6931
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 MPPGEIKVDD 10
+P G I VD+
Sbjct: 6942 LPSGSILVDN 6951
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 MPPGEIKVDD 10
+P G I VD+
Sbjct: 6972 LPSGSILVDN 6981
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 3 PGEIK 7
PGEIK
Sbjct: 52 PGEIK 56
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PGEIK 7
PGEIK
Sbjct: 52 PGEIK 56
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 3 PGEIK 7
PGEIK
Sbjct: 52 PGEIK 56
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 PPGEIKVD 9
PP IK+D
Sbjct: 142 PPERIKLD 149
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PGEIK 7
PGEIK
Sbjct: 52 PGEIK 56
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 3 PGEIK 7
PGEIK
Sbjct: 52 PGEIK 56
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 PPGEIKVD 9
PP IK+D
Sbjct: 142 PPERIKLD 149
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 PPGEIKVD 9
PP IK+D
Sbjct: 142 PPERIKLD 149
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 MPPGEIK 7
+PPG+I+
Sbjct: 219 IPPGQIR 225
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 1 MPPGEIK 7
+PP EIK
Sbjct: 209 IPPSEIK 215
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 2 PPGEIKVD 9
PP IK+D
Sbjct: 142 PPERIKLD 149
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 2 PPGEIKVD 9
PP IK+D
Sbjct: 142 PPERIKLD 149
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PGEIKVD 9
PG++K+D
Sbjct: 384 PGQLKLD 390
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 3 PGEIKVD 9
PG +K+D
Sbjct: 384 PGGVKID 390
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 MPPGEIK 7
+P GE+K
Sbjct: 742 LPSGEVK 748
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 MPPGEIK 7
+PPG+I+
Sbjct: 222 IPPGQIR 228
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 MPPGEIK 7
+PPG+I+
Sbjct: 222 IPPGQIR 228
>sp|TEG7_HHV8P|TEGUMENT protein ORF55|Human herpesvirus 8 type P
Query: 4 GEIKVDD 10
GEI VDD
Sbjct: 121 GEITVDD 127
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 1 MPPGEIK 7
+PP EIK
Sbjct: 206 IPPSEIK 212
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 PPGEIKVD 9
PP IK+D
Sbjct: 142 PPERIKLD 149
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 PPGEIKV 8
PPGE+ +
Sbjct: 68 PPGELNL 74
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPGEIK 7
PPG+I+
Sbjct: 224 PPGQIR 229
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPGEIK 7
PPG+I+
Sbjct: 224 PPGQIR 229
72|Sequence|356|365|IKVDDAKVSP
>sp|UL130_HCMVM|ENVELOPE glycoprotein UL130|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IKVDDAKV 8
I V+DAK+
Sbjct: 139 ISVEDAKI 146
>sp|UL130_HCMVA|UNCHARACTERIZED protein UL130|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IKVDDAKV 8
I V+DAK+
Sbjct: 139 ISVEDAKI 146
>sp|NCAP_SINV|NUCLEOPROTEIN Nombre orthohantavirus (SNV) (Sin
Query: 1 IKVDDAKVS 9
++VD++KVS
Sbjct: 270 LQVDESKVS 278
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 KVDDAKVSP 10
K+ D K++P
Sbjct: 192 KLQDCKIAP 200
73|Sequence|361|370|AKVSPPKRAE
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 VSPPKR 8
+SPPKR
Sbjct: 477 ISPPKR 482
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 2 KVSPP 6
KVSPP
Sbjct: 72 KVSPP 76
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 KVSPP 6
KVSPP
Sbjct: 72 KVSPP 76
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 2 KVSPP 6
KVSPP
Sbjct: 72 KVSPP 76
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 2 KVSPP 6
KVSPP
Sbjct: 72 KVSPP 76
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KVSPP 6
KVSPP
Sbjct: 72 KVSPP 76
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KVSPP 6
KVSPP
Sbjct: 72 KVSPP 76
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 AKVSPPKRA 9
KVSPP +A
Sbjct: 153 CKVSPPIQA 161
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 AKVSPPKRA 9
KVSPP +A
Sbjct: 153 CKVSPPIQA 161
74|Sequence|366|375|PKRAEMKTSM
***** No hits found ******
75|Sequence|371|380|MKTSMESLIH
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 1 MKTSMESLIH 10
+KTS+ L+H
Sbjct: 293 LKTSLRCLLH 302
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 KTSMESLIH 10
KTS+E +IH
Sbjct: 1896 KTSVEYIIH 1904
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 KTSMESLIH 10
KTS+E +IH
Sbjct: 1896 KTSVEYIIH 1904
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 KTSMESLIH 10
KTS+E +IH
Sbjct: 1896 KTSVEYIIH 1904
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 MKTSME 6
MKTSME
Sbjct: 541 MKTSME 546
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 MKTSME 6
MKTSME
Sbjct: 541 MKTSME 546
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 1 MKTSMESLI 9
MK+S+E L+
Sbjct: 393 MKSSLEDLL 401
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 MKTSMESLI 9
MK+S+E L+
Sbjct: 393 MKSSLEDLL 401
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 1 MKTSMESLI 9
MK+S+E L+
Sbjct: 393 MKSSLEDLL 401
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 MKTSMESLI 9
MK+S+E L+
Sbjct: 393 MKSSLEDLL 401
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 1 MKTSMESLI 9
MK+S+E L+
Sbjct: 393 MKSSLEDLL 401
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 MKTSMESLI 9
MK+S+E L+
Sbjct: 393 MKSSLEDLL 401
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 1 MKTSMESLIH 10
MK+S+E L++
Sbjct: 392 MKSSLEDLLN 401
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 2 KTSMESLIH 10
KTS E IH
Sbjct: 495 KTSCEQTIH 503
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 1 MKTSMESLI 9
MK+S+E L+
Sbjct: 392 MKSSLEELL 400
76|Sequence|376|385|ESLIHHFKLY
>sp|UL20_VZVD|PROTEIN UL20 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 SLIHHFKL 9
+++HHF+L
Sbjct: 113 TILHHFRL 120
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 LIHHFKLY 10
LIH F LY
Sbjct: 204 LIHWFNLY 211
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 LIHHFKLY 10
LIH F LY
Sbjct: 204 LIHWFNLY 211
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 LIHHFKLY 10
LIH F LY
Sbjct: 204 LIHWFNLY 211
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 ESLIHHFK 8
E LIH FK
Sbjct: 286 EYLIHQFK 293
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 SLIHH 6
SLIHH
Sbjct: 1618 SLIHH 1622
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 SLIHH 6
SLIHH
Sbjct: 1618 SLIHH 1622
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 IHHFKL 9
+HHF+L
Sbjct: 410 LHHFEL 415
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 4 IHHFKL 9
+HHF+L
Sbjct: 410 LHHFEL 415
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 SLIHHFKLY 10
S IH+ K+Y
Sbjct: 107 STIHYPKIY 115
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 SLIHHFKLY 10
S IH+ K+Y
Sbjct: 107 STIHYPKIY 115
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 SLIHHFKLY 10
S IH+ K+Y
Sbjct: 107 STIHYPKIY 115
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 2 SLIHHFKLY 10
S IH+ K+Y
Sbjct: 107 STIHYPKIY 115
77|Sequence|381|390|HFKLYTEGYQ
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 FKLYTEGY 9
F LY EGY
Sbjct: 1032 FALYDEGY 1039
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 2 FKLYTEGY 9
FKLY GY
Sbjct: 488 FKLYPGGY 495
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 HFKLYTEGYQ 10
HF TEG Q
Sbjct: 121 HFSRLTEGRQ 130
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 HFKLYTEGYQ 10
HF TEG Q
Sbjct: 121 HFSRLTEGRQ 130
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 1 HFKLYTEGYQ 10
HF TEG Q
Sbjct: 121 HFSRLTEGRQ 130
>sp|PG058_VACCP|PROTEIN OPG058|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 FKLYTEG 8
++LY+EG
Sbjct: 3 YRLYSEG 9
>sp|PG058_VACCC|PROTEIN OPG058|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 FKLYTEG 8
++LY+EG
Sbjct: 3 YRLYSEG 9
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 KLYTEGY 9
KL+ EGY
Sbjct: 552 KLFDEGY 558
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 2 FKLYTE 7
FK+YTE
Sbjct: 386 FKIYTE 391
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 3 KLYTEGYQ 10
+LY++ YQ
Sbjct: 226 RLYSKAYQ 233
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 3 KLYTEGYQ 10
+LY++ YQ
Sbjct: 226 RLYSKAYQ 233
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 KLYTEGY 9
KL+ EGY
Sbjct: 552 KLFDEGY 558
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 2 FKLYTE 7
+KLYTE
Sbjct: 9 YKLYTE 14
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 4 LYTEGYQ 10
LY EGY+
Sbjct: 174 LYREGYK 180
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 4 LYTEGYQ 10
LY EGY+
Sbjct: 184 LYREGYK 190
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 4 LYTEGYQ 10
LY EGY+
Sbjct: 184 LYREGYK 190
>sp|A18_YLDV|TRANSCRIPT termination protein A18|Yaba-like disease virus (YLDV)
Query: 2 FKLYTE 7
+KLYTE
Sbjct: 9 YKLYTE 14
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 3 KLYTEGY 9
K Y EGY
Sbjct: 214 KCYNEGY 220
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 5 YTEGYQ 10
+TEGY+
Sbjct: 364 FTEGYR 369
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HFKLYT 6
HF +YT
Sbjct: 255 HFSVYT 260
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HFKLYT 6
HF +YT
Sbjct: 255 HFSVYT 260
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 KLYTEGY 9
KL+T GY
Sbjct: 221 KLHTPGY 227
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 KLYTEGY 9
KL+T GY
Sbjct: 221 KLHTPGY 227
78|Sequence|386|395|TEGYQVPPGA
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GYQVPPGA 10
G+Q PPGA
Sbjct: 1110 GWQAPPGA 1117
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GYQVPPGA 10
G+Q PPGA
Sbjct: 1110 GWQAPPGA 1117
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GYQVPPGA 10
G+Q PPG+
Sbjct: 1110 GWQAPPGS 1117
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 GYQVPPG 9
GYQ+PP
Sbjct: 2559 GYQLPPN 2565
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GYQVPPG 9
GYQ+PP
Sbjct: 2586 GYQLPPN 2592
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 GYQVPPG 9
GYQ+PP
Sbjct: 2564 GYQLPPN 2570
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 GYQVPPGA 10
GY+ PP A
Sbjct: 452 GYEEPPKA 459
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 GYQVPPGA 10
GY+ PP A
Sbjct: 452 GYEEPPKA 459
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 4 YQVPPGA 10
+QVPP A
Sbjct: 94 FQVPPDA 100
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 4 YQVPPGA 10
+QVPP A
Sbjct: 94 FQVPPDA 100
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 4 YQVPPGA 10
+QVPP A
Sbjct: 94 FQVPPDA 100
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 4 YQVPPGA 10
+QVPP A
Sbjct: 94 FQVPPDA 100
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 4 YQVPPGA 10
+QVPP A
Sbjct: 94 FQVPPDA 100
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 6 VPPGA 10
VPPGA
Sbjct: 34 VPPGA 38
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 GYQVPPGA 10
G+Q+ PGA
Sbjct: 415 GFQLNPGA 422
>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12
Query: 4 YQVPP 8
YQ+PP
Sbjct: 17 YQLPP 21
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 1 TEGYQVPPG 9
T GY+V PG
Sbjct: 64 TPGYRVTPG 72
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 3 GYQVPP 8
GY+ PP
Sbjct: 43 GYETPP 48
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TEGYQVPP 8
TEG+QV P
Sbjct: 711 TEGHQVIP 718
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TEGYQVPP 8
TEG+QV P
Sbjct: 710 TEGHQVIP 717
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 GYQVPPGA 10
GY V PG
Sbjct: 5050 GYYVKPGG 5057
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 1 TEGYQVPPG 9
T GY+V PG
Sbjct: 64 TPGYRVTPG 72
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 GYQVPPG 9
G+QV PG
Sbjct: 415 GFQVQPG 421
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 EGYQVPPG 9
+GYQ PP
Sbjct: 748 QGYQEPPA 755
Query: 2 EGYQVPPG 9
+GYQ PP
Sbjct: 774 QGYQEPPA 781
Query: 2 EGYQVPP 8
+GYQ PP
Sbjct: 761 QGYQEPP 767
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 TEGYQV 6
+EGYQ+
Sbjct: 290 SEGYQI 295
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 EGYQVPPG 9
+GYQ PP
Sbjct: 791 QGYQEPPA 798
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TEGYQVPPG 9
T GY PPG
Sbjct: 376 TGGYGCPPG 384
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 QVPPG 9
QVPPG
Sbjct: 283 QVPPG 287
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 4 YQVPPGA 10
YQ+ PGA
Sbjct: 719 YQLAPGA 725
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 EGYQVPPGA 10
E + VPPG+
Sbjct: 303 ELHSVPPGS 311
79|Sequence|391|400|VPPGATYTAI
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PGATYTAI 10
PG+ YTA+
Sbjct: 142 PGSDYTAV 149
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PGATYTAI 10
PG+ YTA+
Sbjct: 142 PGSDYTAV 149
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PGATYTAI 10
PG+ YTA+
Sbjct: 142 PGSDYTAV 149
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 1 VPPGATYTA 9
VPPG T A
Sbjct: 64 VPPGTTSKA 72
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 VPPGATYTAI 10
V PG T+T +
Sbjct: 3352 VKPGETFTVL 3361
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 VPPGATYTAI 10
V PG T+T +
Sbjct: 3390 VKPGETFTVL 3399
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 VPPGATYTAI 10
V PG T+T +
Sbjct: 3410 VKPGETFTVL 3419
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 VPPGATYTAI 10
V PG T+T +
Sbjct: 3440 VKPGETFTVL 3449
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 VPPGATYTAI 10
V PG T+T +
Sbjct: 3352 VKPGETFTVL 3361
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 VPPGATYTAI 10
V PG T+T +
Sbjct: 3390 VKPGETFTVL 3399
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 VPPGATYTAI 10
V PG T+T +
Sbjct: 3410 VKPGETFTVL 3419
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 VPPGATYTAI 10
V PG T+T +
Sbjct: 3440 VKPGETFTVL 3449
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 PPGATYTA 9
PP T+T+
Sbjct: 18 PPAVTFTS 25
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PPGAT 6
PPGAT
Sbjct: 1792 PPGAT 1796
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PPGAT 6
PPGAT
Sbjct: 1792 PPGAT 1796
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PPGAT 6
PPGAT
Sbjct: 1792 PPGAT 1796
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 3 PGATYTAI 10
P AT TAI
Sbjct: 737 PSATLTAI 744
>sp|UL24_EBVB9|PROTEIN UL24 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VPPGATYT 8
+PPG T+T
Sbjct: 55 LPPGPTFT 62
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 PPGATYTA 9
PPGAT A
Sbjct: 726 PPGATLDA 733
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 3 PGATYTAI 10
P AT+T I
Sbjct: 698 PSATFTTI 705
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 1 VPPGATYT 8
+P G TYT
Sbjct: 390 LPRGCTYT 397
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 PGATYTAI 10
PGA YT +
Sbjct: 224 PGAQYTCV 231
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 4 GATYTAI 10
G TYTA+
Sbjct: 58 GKTYTAL 64
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 4 GATYTAI 10
G TYTA+
Sbjct: 58 GKTYTAL 64
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 4 GATYTAI 10
G TYTA+
Sbjct: 58 GKTYTAL 64
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 3 PGATYTAI 10
P AT+T I
Sbjct: 697 PSATFTTI 704
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 PGATYTAI 10
PGATY +
Sbjct: 785 PGATYLCL 792
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 PGATYTAI 10
PGATY +
Sbjct: 785 PGATYLCL 792
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 VPPGATY 7
V PGATY
Sbjct: 780 VVPGATY 786
>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPGATYTAI 10
P G T TAI
Sbjct: 40 PNGVTRTAI 48
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 PGATYTAI 10
P TYTA+
Sbjct: 789 PACTYTAL 796
80|Sequence|396|405|TYTAIEAPKG
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 TYTAIEAPKG 10
TY ++ PKG
Sbjct: 1129 TYISVHCPKG 1138
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 TYTAIEAPKG 10
TY ++ PKG
Sbjct: 1129 TYISVHCPKG 1138
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 TYTAIEA 7
TYTA+E
Sbjct: 60 TYTALEG 66
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 1 TYTAIEA 7
TYTA+E
Sbjct: 60 TYTALEG 66
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 TYTAIEA 7
TYTA+E
Sbjct: 60 TYTALEG 66
81|Sequence|401|410|EAPKGEFGVY
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 1 EAPKGEFGV 9
+AP+GEF +
Sbjct: 62 QAPQGEFTI 70
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 2 APKGEFGV 9
+PKG +G+
Sbjct: 339 SPKGAYGI 346
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 1 EAPKGEFGV 9
+AP GEF V
Sbjct: 58 QAPGGEFTV 66
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 3 PKGEFGVY 10
PK +FG +
Sbjct: 722 PKSQFGFF 729
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 PKGEFGVY 10
PK EF Y
Sbjct: 1343 PKSEFEFY 1350
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 PKGEFGVY 10
PK EF Y
Sbjct: 1343 PKSEFEFY 1350
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 PKGEFGVY 10
PK EF Y
Sbjct: 1344 PKSEFEFY 1351
>sp|TAT_HV2ST|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 EAPKGEFGVY 10
+AP+G G Y
Sbjct: 6 KAPEGSLGSY 15
82|Sequence|406|415|EFGVYLVSDG
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 EFGVYLVSDG 10
EFG VSDG
Sbjct: 1070 EFGCLAVSDG 1079
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 EFGVYLVSDG 10
EFG VSDG
Sbjct: 1070 EFGCLAVSDG 1079
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 1 EFGVYLVSDG 10
E G+Y V DG
Sbjct: 156 ELGLYYVHDG 165
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 EFGVYLVSDG 10
EFG +SDG
Sbjct: 1070 EFGCLAISDG 1079
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 2 FGVYLVSDG 10
+GVY + DG
Sbjct: 162 WGVYYIKDG 170
>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56
Query: 3 GVYLVSDG 10
G+Y V DG
Sbjct: 99 GIYYVHDG 106
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 3 GVYLVSDG 10
G+Y V DG
Sbjct: 156 GIYYVHDG 163
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 1 EFGVYLVSDG 10
E G++ V DG
Sbjct: 156 ELGLFYVHDG 165
>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)
Query: 1 EFGVYLV 7
E+G+Y+V
Sbjct: 196 EYGIYIV 202
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 3 GVYLVSDG 10
G+Y + DG
Sbjct: 156 GIYYIHDG 163
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 FGVYLVS 8
F VYL+S
Sbjct: 83 FSVYLIS 89
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas)
Query: 2 FGVYLVS 8
F VYL+S
Sbjct: 83 FSVYLIS 89
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 2 FGVYLVSD 9
FGV +SD
Sbjct: 721 FGVLFISD 728
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EFGVYLV 7
++GVY+V
Sbjct: 672 QYGVYIV 678
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EFGVYLV 7
++GVY+V
Sbjct: 672 QYGVYIV 678
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EFGVYLV 7
++GVY+V
Sbjct: 668 QYGVYIV 674
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 EFGVYLV 7
++GVY+V
Sbjct: 679 QYGVYIV 685
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 1 EFGVYLV 7
E GVY+V
Sbjct: 431 ELGVYVV 437
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 2 FGVYLVSD 9
FGV VSD
Sbjct: 216 FGVSYVSD 223
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 1 EFGVYLVSDG 10
E G+Y DG
Sbjct: 156 ELGLYYEHDG 165
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 YLVSDG 10
Y VSDG
Sbjct: 567 YFVSDG 572
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 3 GVYLVSDG 10
G+Y + DG
Sbjct: 156 GIYYMHDG 163
83|Sequence|411|420|LVSDGSSRPY
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 LVSDGSSRPY 10
LVSDG PY
Sbjct: 590 LVSDGGPNPY 599
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 VSDGSSRPY 10
++DGS +PY
Sbjct: 2909 MADGSPQPY 2917
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 VSDGSSRPY 10
++DGS +PY
Sbjct: 2909 MADGSPQPY 2917
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 LVSDGSSRPY 10
LVSDG S Y
Sbjct: 590 LVSDGGSNLY 599
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 LVSDGSSRPY 10
LVSDG S Y
Sbjct: 590 LVSDGGSNLY 599
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 1 LVSDGSSRPY 10
LVSDG S Y
Sbjct: 590 LVSDGGSNLY 599
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 VSDGSSRP 9
V DG SRP
Sbjct: 119 VLDGPSRP 126
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 LVSDGSSRPY 10
+ +DG RPY
Sbjct: 478 VTNDGDMRPY 487
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 LVSDGSSRPY 10
LV GSS PY
Sbjct: 1022 LVLPGSSAPY 1031
>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka
Query: 3 SDGSSRP 9
+DG SRP
Sbjct: 175 TDGKSRP 181
>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 SDGSSRP 9
+DG SRP
Sbjct: 175 TDGKSRP 181
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 3 SDGSSRP 9
+DG++RP
Sbjct: 39 NDGNNRP 45
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 SDGSSRP 9
+DG++RP
Sbjct: 39 NDGNNRP 45
84|Sequence|416|425|SSRPYRCKIK
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 SSRPYRC 7
+SRP+RC
Sbjct: 637 TSRPFRC 643
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 1 SSRPYRC 7
+SRP+RC
Sbjct: 635 TSRPFRC 641
>sp|K42_HHV8P|PROTEIN K4.2|Human herpesvirus 8 type P
Query: 3 RPYRCKI 9
+PYRC I
Sbjct: 144 KPYRCAI 150
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 SSRPYRCKI 9
SS+PY C I
Sbjct: 345 SSQPYYCFI 353
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 SSRPYRCKIK 10
S RP++C +
Sbjct: 590 SQRPFQCSAR 599
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 1 SSRPYRCKI 9
S+RP CKI
Sbjct: 6 SARPAGCKI 14
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 SSRPYRC 7
+S P+RC
Sbjct: 628 TSEPFRC 634
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 1 SSRPYRC 7
+S P+RC
Sbjct: 644 TSEPFRC 650
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 2 SRPYRC 7
S P+RC
Sbjct: 648 SEPFRC 653
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 1 SSRPYRC 7
SSR YRC
Sbjct: 282 SSRRYRC 288
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 SSRPYRC 7
SSR YRC
Sbjct: 282 SSRRYRC 288
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 2 SRPYRC 7
S P+RC
Sbjct: 667 SEPFRC 672
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 SSRPYRC 7
SSR YRC
Sbjct: 282 SSRRYRC 288
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 SSRPYRC 7
SSR YRC
Sbjct: 282 SSRRYRC 288
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 SSRPYRC 7
++R YRC
Sbjct: 918 AARDYRC 924
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 SSRPYRCKI 9
+S PY C +
Sbjct: 995 ASDPYSCNL 1003
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 2 SRPYRC 7
S P+RC
Sbjct: 646 SEPFRC 651
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 PYRC 7
PYRC
Sbjct: 558 PYRC 561
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 SSRPYRCKI 9
SS PY C I
Sbjct: 1807 SSYPYGCPI 1815
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PYRCKI 9
PY CK+
Sbjct: 172 PYACKV 177
85|Sequence|421|430|RCKIKAPGFA
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 RCKIKAPGFA 10
RC+++ PG A
Sbjct: 1979 RCQLQNPGVA 1988
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 CKIKAPGFA 10
C++ PGFA
Sbjct: 967 CRLWIPGFA 975
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 CKIKAPGFA 10
C++ PGFA
Sbjct: 967 CRLWIPGFA 975
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 CKIKAPGFA 10
C++ PGFA
Sbjct: 967 CRLWIPGFA 975
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 RCKIKAPGFA 10
+C+ KA GF+
Sbjct: 412 KCEKKAAGFS 421
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 CKIKAPGF 9
C K PGF
Sbjct: 6 CWTKVPGF 13
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CKIKAPGF 9
C K PGF
Sbjct: 6 CWTKVPGF 13
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 2 CKIKAP 7
CK KAP
Sbjct: 504 CKYKAP 509
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 2 CKIKAP 7
CK KAP
Sbjct: 504 CKYKAP 509
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 CKIKAP 7
CK KAP
Sbjct: 504 CKYKAP 509
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 2 CKIKAP 7
CK KAP
Sbjct: 503 CKYKAP 508
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RCKIKAP 7
RC+ KAP
Sbjct: 560 RCRRKAP 566
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RCKIKAP 7
RC+ KAP
Sbjct: 560 RCRRKAP 566
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 2 CKIKAP 7
CK KAP
Sbjct: 504 CKHKAP 509
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 2 CKIKAP 7
CK KAP
Sbjct: 507 CKHKAP 512
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 2 CKIKAP 7
CK KAP
Sbjct: 503 CKHKAP 508
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 CKIKAP 7
CK KAP
Sbjct: 505 CKHKAP 510
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 2 CKIKAP 7
CK KAP
Sbjct: 504 CKHKAP 509
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 2 CKIKAP 7
CK KAP
Sbjct: 505 CKHKAP 510
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CKIKAPG 8
CK+ +PG
Sbjct: 175 CKVISPG 181
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2118 CQVPAPEF 2125
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2118 CQVPAPEF 2125
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2122 CQVPAPEF 2129
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2116 CQVPAPEF 2123
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2114 CQVPAPEF 2121
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2118 CQVPAPEF 2125
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2114 CQVPAPEF 2121
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2114 CQVPAPEF 2121
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2114 CQVPAPEF 2121
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2114 CQVPAPEF 2121
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2119 CQVPAPEF 2126
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2115 CQVPAPEF 2122
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2114 CQVPAPEF 2121
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2114 CQVPAPEF 2121
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2118 CQVPAPEF 2125
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 CKIKAPGF 9
C++ AP F
Sbjct: 2112 CQVPAPEF 2119
86|Sequence|426|435|APGFAHLAGL
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PGFAHLAGL 10
PGFA LAG
Sbjct: 244 PGFALLAGF 252
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PGFAHLAGL 10
PGFA LAG
Sbjct: 244 PGFALLAGF 252
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PGFAHLAGL 10
PGFA LAG
Sbjct: 244 PGFALLAGF 252
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PGFAHLAGL 10
PGFA LAG
Sbjct: 244 PGFALLAGF 252
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PGFAHLAGL 10
PGFA LAG
Sbjct: 244 PGFALLAGF 252
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 GFAHLAGL 10
GF H AG+
Sbjct: 3774 GFVHYAGV 3781
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 GFAHLAGL 10
GF H AG+
Sbjct: 3774 GFVHYAGV 3781
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 APGFAHLAG 9
PGF LAG
Sbjct: 1088 GPGFKTLAG 1096
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 4 FAHLAGL 10
+ HLAGL
Sbjct: 569 YEHLAGL 575
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 4 FAHLAGL 10
+ HLAGL
Sbjct: 568 YEHLAGL 574
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 4 FAHLAGL 10
+ HLAGL
Sbjct: 568 YEHLAGL 574
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 PGFAHL 7
P FAHL
Sbjct: 97 PAFAHL 102
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 PGFAHL 7
P FAHL
Sbjct: 100 PAFAHL 105
87|Sequence|431|440|HLAGLDKMSK
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 HLAGLDKMS 9
HL G+DK++
Sbjct: 177 HLGGMDKVT 185
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 HLAGLDKMS 9
HL G+DK++
Sbjct: 177 HLGGMDKVT 185
>sp|PG060_MONPV|PROTEIN OPG060|Monkeypox virus (MPXV)
Query: 2 LAGLDKM 8
+AGLDK+
Sbjct: 4 IAGLDKL 10
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 HLAGLDKMS 9
HL G DK++
Sbjct: 177 HLGGSDKVT 185
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 HLAGLDKMS 9
HL G DK++
Sbjct: 177 HLGGSDKVT 185
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 HLAGLDKMS 9
HL G DK++
Sbjct: 177 HLGGSDKVT 185
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 4 GLDKMSK 10
GLD+M+K
Sbjct: 1000 GLDEMAK 1006
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 1 HLAGLDKM 8
H+A +DK+
Sbjct: 281 HVADIDKL 288
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 1 HLAGLDKM 8
H+A +DK+
Sbjct: 281 HVADIDKL 288
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 1 HLAGLDKM 8
H+A +DK+
Sbjct: 281 HVADIDKL 288
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 HLAGLDKM 8
H+A +DK+
Sbjct: 281 HVADIDKL 288
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 1 HLAGLDKM 8
H+A +DK+
Sbjct: 238 HVADIDKL 245
88|Sequence|436|445|DKMSKGHMLA
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 1 DKMSKGHML 9
D+MSKGH++
Sbjct: 312 DQMSKGHVV 320
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 2 KMSKGHML 9
KM+K H+L
Sbjct: 336 KMTKSHLL 343
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DKMSKGHM 8
+KM KG M
Sbjct: 150 EKMEKGEM 157
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 DKMSKGH 7
DK+SK H
Sbjct: 134 DKVSKSH 140
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 DKMSKGH 7
DK+SK H
Sbjct: 134 DKVSKSH 140
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 DKMSKGH 7
DK+SK H
Sbjct: 134 DKVSKSH 140
>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DKMSKGHMLA 10
+KMS+G L+
Sbjct: 33 EKMSRGQPLS 42
>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DKMSKGHMLA 10
+KMS+G L+
Sbjct: 33 EKMSRGQPLS 42
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KMSKGHMLA 10
K K HM+A
Sbjct: 1151 KFGKKHMIA 1159
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KMSKGHMLA 10
K K HM+A
Sbjct: 1151 KFGKKHMIA 1159
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KMSKGHMLA 10
K K HM+A
Sbjct: 1151 KFGKKHMIA 1159
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KMSKGHMLA 10
K K HM+A
Sbjct: 1151 KFGKKHMIA 1159
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KMSKGHMLA 10
K K HM+A
Sbjct: 1151 KFGKKHMIA 1159
89|Sequence|441|450|GHMLADVVAI
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 HMLADVV 8
HMLAD V
Sbjct: 380 HMLADKV 386
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 HMLADVV 8
HMLAD V
Sbjct: 380 HMLADKV 386
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 1 GHMLADVVAI 10
GH D VA+
Sbjct: 447 GHYCCDTVAV 456
>sp|UL24_HHV8P|PROTEIN UL24 homolog|Human herpesvirus 8 type P
Query: 1 GHMLADVVAI 10
GH +AD V +
Sbjct: 69 GHRIADCVIL 78
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 LADVVAI 10
+ADV+AI
Sbjct: 144 IADVIAI 150
90|Sequence|446|455|DVVAIIGTQD
>sp|UL129_HCMVA|UNCHARACTERIZED protein UL129|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DVVAIIGTQ 9
DVVA IG+Q
Sbjct: 39 DVVAAIGSQ 47
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 DVVAIIGTQD 10
D+V I G QD
Sbjct: 818 DLVVIEGNQD 827
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 DVVAIIGTQD 10
DV++ + T+D
Sbjct: 116 DVISTVSTKD 125
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 DVVAIIGTQD 10
DV++ + T+D
Sbjct: 116 DVISTVSTKD 125
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 DVVAIIGTQ 9
D+V ++GT+
Sbjct: 73 DLVQLVGTR 81
91|Sequence|451|463|IGTQDIVFGEVDR
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 QDIVFGEVDR 13
+DI+ E+DR
Sbjct: 192 EDILLKEIDR 201
>sp|VP2_SVM10|MINOR capsid protein VP2|Sapporo virus (isolate
Query: 2 GTQDIVFGEVDR 13
GT+ + +G +DR
Sbjct: 90 GTETVSYGLLDR 101
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 IGTQDIVFGEVDR 13
I +QD VFG V +
Sbjct: 1534 ICSQDKVFGYVQQ 1546
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 IGTQDIVFGEVDR 13
I +QD VFG V +
Sbjct: 1534 ICSQDKVFGYVQQ 1546
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 5 DIVFGEVDR 13
D+V GE+ R
Sbjct: 538 DVVLGELTR 546
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GTQDIVFGE 10
GT D++F +
Sbjct: 421 GTSDLIFAD 429
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GTQDIVFGE 10
GT D++F +
Sbjct: 421 GTSDLIFAD 429
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 TQDIVFGEV 11
T+D+V G+V
Sbjct: 302 TEDVVDGDV 310
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 TQDIVFGEV 11
T+D+V G+V
Sbjct: 302 TEDVVDGDV 310