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1|Sequence|1|10|MAALRALCGF

>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  MAALRALCGF 10
          MAALRALCGF
Sbjct: 1  MAALRALCGF 10


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  MAALRALCGF 10
          MAALRALCGF
Sbjct: 1  MAALRALCGF 10




2|Sequence|6|15|ALCGFRGVAA

>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  ALCGFRGVAA 10
          ALCGFRGVAA
Sbjct: 6  ALCGFRGVAA 15


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  ALCGFRGVAA 10
          ALCGFRGVAA
Sbjct: 6  ALCGFRGVAA 15




3|Sequence|11|20|RGVAAQVLRP

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  RGVAAQVLRP 10
          RGVAAQVLRP
Sbjct: 11 RGVAAQVLRP 20


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  RGVAAQVLRP 10
          RGVAAQVLRP
Sbjct: 11 RGVAAQVLRP 20


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  RGVAAQVLRP 10
          RGVAAQVLRP
Sbjct: 11 RGVAAQVLRP 20


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  RGVAAQVLRP 10
          RGVAAQVLRP
Sbjct: 11 RGVAAQVLRP 20


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  RGVAAQVLRP 10
          RG AAQVLRP
Sbjct: 11 RGAAAQVLRP 20




4|Sequence|16|25|QVLRPGAGVR

>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  QVLRPGAGVR 10
          QVLRPGAGVR
Sbjct: 16 QVLRPGAGVR 25


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  QVLRPGAGVR 10
          QVLRPGAGVR
Sbjct: 16 QVLRPGAGVR 25


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  QVLRPGAGVR 10
          QVLRPGAGVR
Sbjct: 16 QVLRPGAGVR 25


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  QVLRPGAGVR 10
          QVLRPGAGVR
Sbjct: 16 QVLRPGAGVR 25


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  QVLRPGAGVR 10
          QVLRPGAGVR
Sbjct: 16 QVLRPGAGVR 25




5|Sequence|21|30|GAGVRLPIQP

>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  GAGVRLPIQP 10
          GAGVRLPIQP
Sbjct: 21 GAGVRLPIQP 30


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  GAGVRLPIQP 10
          GAGVRLPIQP
Sbjct: 21 GAGVRLPIQP 30


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  GAGVRLPIQP 10
          GAGVRLPIQP
Sbjct: 21 GAGVRLPIQP 30


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  GAGVRLPIQP 10
          GAGVRLPIQP
Sbjct: 21 GAGVRLPIQP 30


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  GAGVRLPIQP 10
          GAGVRLPIQP
Sbjct: 21 GAGVRLPIQP 30




6|Sequence|26|35|LPIQPSRGVR

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  LPIQPSRGVR 10
          LPIQPSRGVR
Sbjct: 26 LPIQPSRGVR 35


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  LPIQPSRGVR 10
          LPIQPSRGVR
Sbjct: 26 LPIQPSRGVR 35


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  LPIQPSRGVR 10
          LPIQPSRGVR
Sbjct: 26 LPIQPSRGVR 35


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  LPIQPSRGVR 10
          LPIQPSRGVR
Sbjct: 26 LPIQPSRGVR 35


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  LPIQPSRGVR 10
          LPIQPSRG R
Sbjct: 26 LPIQPSRGAR 35




7|Sequence|31|40|SRGVRQWQPD

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  SRGVRQWQPD 10
          SRGVRQWQPD
Sbjct: 31 SRGVRQWQPD 40


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  SRGVRQWQPD 10
          SRGVRQWQPD
Sbjct: 31 SRGVRQWQPD 40


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  SRGVRQWQPD 10
          SRGVRQWQPD
Sbjct: 31 SRGVRQWQPD 40


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  SRGVRQWQPD 10
          SRGVRQWQPD
Sbjct: 31 SRGVRQWQPD 40


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus

Query: 1  SRGVRQWQPD 10
          SRG RQWQPD
Sbjct: 31 SRGARQWQPD 40


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  SRGVRQWQPD 10
          SRG RQWQPD
Sbjct: 31 SRGARQWQPD 40


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1  SRGVRQWQPD 10
          SRG R+WQPD
Sbjct: 31 SRGARRWQPD 40




8|Sequence|36|45|QWQPDVEWAQ

>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus

Query: 1  QWQPDVEWAQ 10
          QWQPD+EWA+
Sbjct: 36 QWQPDIEWAE 45


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  QWQPDVEWAQ 10
          QWQPDVEWAQ
Sbjct: 36 QWQPDVEWAQ 45


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  QWQPDVEWAQ 10
          QWQPDVEWAQ
Sbjct: 36 QWQPDVEWAQ 45


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  QWQPDVEWAQ 10
          QWQPDVEWAQ
Sbjct: 36 QWQPDVEWAQ 45


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  QWQPDVEWAQ 10
          QWQPDVEWAQ
Sbjct: 36 QWQPDVEWAQ 45


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  QWQPDVEWAQ 10
          QWQPDVEWA+
Sbjct: 36 QWQPDVEWAE 45


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1  QWQPDVEWAQ 10
          +WQPD+EWA+
Sbjct: 36 RWQPDIEWAE 45




9|Sequence|41|50|VEWAQQFGGA

>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  VEWAQQFGGA 10
          VEWAQQFGGA
Sbjct: 41 VEWAQQFGGA 50


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  VEWAQQFGGA 10
          VEWAQQFGGA
Sbjct: 41 VEWAQQFGGA 50


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  VEWAQQFGGA 10
          VEWAQQFGGA
Sbjct: 41 VEWAQQFGGA 50


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  VEWAQQFGGA 10
          VEWAQQFGGA
Sbjct: 41 VEWAQQFGGA 50


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  VEWAQQFGGA 10
          VEWA+Q+GGA
Sbjct: 41 VEWAEQYGGA 50


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus

Query: 1  VEWAQQFGGA 10
          +EWA+QF GA
Sbjct: 41 IEWAEQFSGA 50


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1  VEWAQQFGGA 10
          +EWA+QF GA
Sbjct: 41 IEWAEQFSGA 50




10|Sequence|46|55|QFGGAVMYPS

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  QFGGAVMYPS 10
          QFGGAVMYPS
Sbjct: 46 QFGGAVMYPS 55


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  QFGGAVMYPS 10
          QFGGAVMYPS
Sbjct: 46 QFGGAVMYPS 55


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  QFGGAVMYPS 10
          QFGGAVMYPS
Sbjct: 46 QFGGAVMYPS 55


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  QFGGAVMYPS 10
          QFGGAVMYPS
Sbjct: 46 QFGGAVMYPS 55


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus

Query: 1  QFGGAVMYPS 10
          QF GAVMYPS
Sbjct: 46 QFSGAVMYPS 55


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  QFGGAVMYPS 10
          Q+GGAVMYP+
Sbjct: 46 QYGGAVMYPT 55


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1  QFGGAVMYPS 10
          QF GAVMYPS
Sbjct: 46 QFSGAVMYPS 55




11|Sequence|51|60|VMYPSKETAH

>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  VMYPSKETAH 10
          VMYPSKETAH
Sbjct: 51 VMYPSKETAH 60


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  VMYPSKETAH 10
          VMYPSKETAH
Sbjct: 51 VMYPSKETAH 60


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  VMYPSKETAH 10
          VMYPSKETAH
Sbjct: 51 VMYPSKETAH 60


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1  VMYPSKETAH 10
          VMYPSKETAH
Sbjct: 51 VMYPSKETAH 60


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus

Query: 1  VMYPSKETAH 10
          VMYPSKETAH
Sbjct: 51 VMYPSKETAH 60


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  VMYPSKETAH 10
          VMYPSKETAH
Sbjct: 51 VMYPSKETAH 60


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  VMYPSKETAH 10
          VMYP+KETAH
Sbjct: 51 VMYPTKETAH 60




12|Sequence|56|65|KETAHWKPPP

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1  KETAHWKPPP 10
          KETAHWKPPP
Sbjct: 56 KETAHWKPPP 65


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus

Query: 1  KETAHWKPPP 10
          KETAHWKPPP
Sbjct: 56 KETAHWKPPP 65


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  KETAHWKPPP 10
          KETAHWKPPP
Sbjct: 56 KETAHWKPPP 65


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  KETAHWKPPP 10
          KETAHWKPPP
Sbjct: 56 KETAHWKPPP 65


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  KETAHWKPPP 10
          KETAHWKPPP
Sbjct: 56 KETAHWKPPP 65


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  KETAHWKPPP 10
          KETAHWKPPP
Sbjct: 56 KETAHWKPPP 65


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  KETAHWKPPP 10
          KETAHWKPPP
Sbjct: 56 KETAHWKPPP 65


>sp|FRBB_DOTX1|HIGHLY reducing polyketide synthase frbB|Dothideomycetidae sp. (strain

Query: 2    ETAHWKPPP 10
            ET HWKP P
Sbjct: 1910 ETFHWKPDP 1918




13|Sequence|61|70|WKPPPWNDVD

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1  WKPPPWNDVD 10
          WKPPPWNDVD
Sbjct: 61 WKPPPWNDVD 70


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus

Query: 1  WKPPPWNDVD 10
          WKPPPWNDVD
Sbjct: 61 WKPPPWNDVD 70


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  WKPPPWNDVD 10
          WKPPPWNDVD
Sbjct: 61 WKPPPWNDVD 70


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  WKPPPWNDVD 10
          WKPPPWNDVD
Sbjct: 61 WKPPPWNDVD 70


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  WKPPPWNDVD 10
          WKPPPWNDVD
Sbjct: 61 WKPPPWNDVD 70


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  WKPPPWNDVD 10
          WKPPPWNDVD
Sbjct: 61 WKPPPWNDVD 70


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  WKPPPWNDVD 10
          WKPPPWNDV+
Sbjct: 61 WKPPPWNDVE 70


>sp|MOTA_AQUAE|MOTILITY protein A|Aquifex aeolicus (strain VF5)

Query: 1  WKPPPWNDV 9
          WKPP  NDV
Sbjct: 68 WKPPDLNDV 76




14|Sequence|66|75|WNDVDPPKDT

>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  WNDVDPPKDT 10
          WNDVDPPKDT
Sbjct: 66 WNDVDPPKDT 75


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  WNDVDPPKDT 10
          WNDVDPPKDT
Sbjct: 66 WNDVDPPKDT 75


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  WNDVDPPKDT 10
          WNDVDPPKDT
Sbjct: 66 WNDVDPPKDT 75


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  WNDVDPPKDT 10
          WNDVDPPKDT
Sbjct: 66 WNDVDPPKDT 75


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  WNDVDPPKDT 10
          WNDV+PPKDT
Sbjct: 66 WNDVEPPKDT 75




15|Sequence|71|80|PPKDTIVKNI

>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  PPKDTIVKNI 10
          PPKDTIVKNI
Sbjct: 71 PPKDTIVKNI 80


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  PPKDTIVKNI 10
          PPKDTIVKN+
Sbjct: 71 PPKDTIVKNM 80


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  PPKDTIVKNI 10
          PPKDTIVKN+
Sbjct: 71 PPKDTIVKNM 80


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  PPKDTIVKNI 10
          PPKDTIVKN+
Sbjct: 71 PPKDTIVKNM 80


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  PPKDTIVKNI 10
          PPKDT+V N+
Sbjct: 71 PPKDTLVSNL 80




16|Sequence|76|85|IVKNITLNFG

>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  IVKNITLNFG 10
          IVKNITLNFG
Sbjct: 76 IVKNITLNFG 85


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  IVKNITLNFG 10
          IVKN+TLNFG
Sbjct: 76 IVKNMTLNFG 85


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  IVKNITLNFG 10
          IVKN+TLNFG
Sbjct: 76 IVKNMTLNFG 85


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  IVKNITLNFG 10
          IVKN+TLNFG
Sbjct: 76 IVKNMTLNFG 85




17|Sequence|81|90|TLNFGPQHPA

>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 18 TLNFGPQHPA 27


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 18 TLNFGPQHPA 27


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 12 TLNFGPQHPA 21


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 11 TLNFGPQHPA 20


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 11 TLNFGPQHPA 20


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 7  TLNFGPQHPA 16


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 16 TLNFGPQHPA 25


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp.

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 11 TLNFGPQHPA 20


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 11 TLNFGPQHPA 20


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 14 TMNFGPQHPA 23


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 16 TLNFGPQHPA 25


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 26 TMNFGPQHPA 35


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 26 TMNFGPQHPA 35


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 16 TINFGPQHPA 25


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 16 TINFGPQHPA 25


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 16 TINFGPQHPA 25


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 26 TMNFGPQHPA 35


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 26 TMNFGPQHPA 35


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 16 TLNFGPQHPA 25


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 81 TLNFGPQHPA 90


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 8  TLNFGPQHPA 17


>sp|NUOD_CLOB8|NADH-QUINONE oxidoreductase subunit D|Clostridium beijerinckii (strain ATCC

Query: 1  TLNFGPQHPA 10
          TLNFGPQHP+
Sbjct: 13 TLNFGPQHPS 22


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 19 TMNFGPQHPA 28


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 15 TINFGPQHPA 24


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 26 TMNFGPQHPA 35


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 26 TMNFGPQHPA 35


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 26 TMNFGPQHPA 35


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 26 TMNFGPQHPA 35


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 26 TMNFGPQHPA 35


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 26 TMNFGPQHPA 35


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 26 TMNFGPQHPA 35


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1  TLNFGPQHPA 10
          T NFGPQHPA
Sbjct: 8  TFNFGPQHPA 17


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1  TLNFGPQHPA 10
          T NFGPQHPA
Sbjct: 8  TFNFGPQHPA 17


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 81 TLNFGPQHPA 90


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv.

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 26 TMNFGPQHPA 35


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 30 TINFGPQHPA 39


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1  TLNFGPQHPA 10
          T NFGPQHPA
Sbjct: 8  TFNFGPQHPA 17


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1  TLNFGPQHPA 10
          T NFGPQHPA
Sbjct: 8  TFNFGPQHPA 17


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1  TLNFGPQHPA 10
          T NFGPQHPA
Sbjct: 8  TFNFGPQHPA 17


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 26 TMNFGPQHPA 35


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 9  TINFGPQHPA 18


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1  TLNFGPQHPA 10
          TLNFGPQHP+
Sbjct: 8  TLNFGPQHPS 17


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 26 TMNFGPQHPA 35


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 8  TMNFGPQHPA 17


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 9  TINFGPQHPA 18


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 9  TINFGPQHPA 18


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 9  TINFGPQHPA 18


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 9  TINFGPQHPA 18


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 9  TINFGPQHPA 18


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 10 TLNFGPQHPA 19


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 8  TMNFGPQHPA 17


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 16 TINFGPQHPA 25


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 8  TMNFGPQHPA 17


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 81 TLNFGPQHPA 90


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 81 TLNFGPQHPA 90


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 10 TINFGPQHPA 19


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 16 TINFGPQHPA 25


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 10 TINFGPQHPA 19


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1  TLNFGPQHPA 10
          +LNFGPQHPA
Sbjct: 8  SLNFGPQHPA 17


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 13 TINFGPQHPA 22


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1  TLNFGPQHPA 10
          +LNFGPQHPA
Sbjct: 8  SLNFGPQHPA 17


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 81 TLNFGPQHPA 90


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 23 TINFGPQHPA 32


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 8  TMNFGPQHPA 17


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 81 TLNFGPQHPA 90


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 81 TLNFGPQHPA 90


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 16 TINFGPQHPA 25


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 12 TINFGPQHPA 21


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 8  TVNFGPQHPA 17


>sp|NDUS2_NYCOV|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Nyctotherus ovalis (Ciliate

Query: 2  LNFGPQHPA 10
          LNFGPQHPA
Sbjct: 29 LNFGPQHPA 37


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 8  TMNFGPQHPA 17


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 16 TINFGPQHPA 25


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 19 TINFGPQHPA 28


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 22 TINFGPQHPA 31


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 10 TINFGPQHPA 19


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 12 TINFGPQHPA 21


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 12 TINFGPQHPA 21


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1  TLNFGPQHPA 10
          +LNFGPQHPA
Sbjct: 8  SLNFGPQHPA 17


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 10 TVNFGPQHPA 19


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 10 TINFGPQHPA 19


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 20 TINFGPQHPA 29


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 2  LNFGPQHPA 10
          LNFGPQHPA
Sbjct: 9  LNFGPQHPA 17


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 2   LNFGPQHPA 10
           LNFGPQHPA
Sbjct: 101 LNFGPQHPA 109


>sp|NUOD_DESPS|NADH-QUINONE oxidoreductase subunit D|Desulfotalea psychrophila (strain LSv54

Query: 1  TLNFGPQHPA 10
          TLN GPQHPA
Sbjct: 14 TLNLGPQHPA 23


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 20 TINFGPQHPA 29


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 2  LNFGPQHPA 10
          LNFGPQHPA
Sbjct: 10 LNFGPQHPA 18


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 2  LNFGPQHPA 10
          LNFGPQHPA
Sbjct: 9  LNFGPQHPA 17


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC

Query: 1  TLNFGPQHPA 10
          T+NFGPQHPA
Sbjct: 14 TMNFGPQHPA 23


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1  TLNFGPQHPA 10
          T+NFGPQHP+
Sbjct: 8  TINFGPQHPS 17


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 2  LNFGPQHPA 10
          LNFGPQHPA
Sbjct: 9  LNFGPQHPA 17


>sp|NDUS2_SOLTU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Solanum tuberosum

Query: 1  TLNFGPQHPA 10
          TLNFGPQHPA
Sbjct: 12 TLNFGPQHPA 21


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   TLNFGPQHPA 10
           T+NFGPQHPA
Sbjct: 96  TVNFGPQHPA 105


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 2  LNFGPQHPA 10
          LNFGPQHPA
Sbjct: 30 LNFGPQHPA 38


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1  TLNFGPQHPA 10
          T+NFGPQHP+
Sbjct: 8  TMNFGPQHPS 17


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1  TLNFGPQHPA 10
          T+NFGPQHP+
Sbjct: 8  TINFGPQHPS 17


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain

Query: 2  LNFGPQHPA 10
          LNFGPQHPA
Sbjct: 11 LNFGPQHPA 19


>sp|NUOD_HELMI|NADH-QUINONE oxidoreductase subunit D|Heliobacterium modesticaldum (strain

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 8  LNFGPQHPS 16


>sp|NUOD_CAMC5|NADH-QUINONE oxidoreductase subunit D|Campylobacter curvus (strain 525.92)

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 26 LNFGPQHPS 34


>sp|NUOD_CAMC1|NADH-QUINONE oxidoreductase subunit D|Campylobacter concisus (strain 13826)

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 26 LNFGPQHPS 34


>sp|NUOD2_ANADE|NADH-QUINONE oxidoreductase subunit D 2|Anaeromyxobacter dehalogenans (strain

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 18 LNFGPQHPS 26


>sp|NUOD1_ANASK|NADH-QUINONE oxidoreductase subunit D 1|Anaeromyxobacter sp. (strain K)

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 18 LNFGPQHPS 26


>sp|NUOD1_ANADF|NADH-QUINONE oxidoreductase subunit D 1|Anaeromyxobacter sp. (strain Fw109-5)

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 18 LNFGPQHPS 26


>sp|NUOD_CAMHC|NADH-QUINONE oxidoreductase subunit D|Campylobacter hominis (strain ATCC

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 25 LNFGPQHPS 33


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain

Query: 2  LNFGPQHPA 10
          LNFGPQHPA
Sbjct: 9  LNFGPQHPA 17


>sp|NDUS2_PARTE|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Paramecium tetraurelia

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 6  VNFGPQHPA 14


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 2  LNFGPQHPA 10
          LNFGPQHPA
Sbjct: 7  LNFGPQHPA 15


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1  TLNFGPQHPA 10
          TLN GPQHPA
Sbjct: 7  TLNLGPQHPA 16


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040)

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 21 INFGPQHPA 29


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1  TLNFGPQHPA 10
          TLN GPQHPA
Sbjct: 7  TLNLGPQHPA 16


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 29 INFGPQHPA 37


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 29 INFGPQHPA 37


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1  TLNFGPQHPA 10
          TLN GPQHPA
Sbjct: 9  TLNLGPQHPA 18


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 29 INFGPQHPA 37


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1  TLNFGPQHPA 10
          TLN GPQHPA
Sbjct: 9  TLNLGPQHPA 18


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 22 INFGPQHPA 30


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 20 INFGPQHPA 28


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1  TLNFGPQHPA 10
          TLN GPQHPA
Sbjct: 9  TLNLGPQHPA 18


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1  TLNFGPQHPA 10
          TLNFGP HPA
Sbjct: 8  TLNFGPVHPA 17


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 20 INFGPQHPA 28


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1  TLNFGPQHPA 10
          TLN GPQHPA
Sbjct: 9  TLNLGPQHPA 18


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1  TLNFGPQHPA 10
          TLN GPQHPA
Sbjct: 9  TLNLGPQHPA 18


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1  TLNFGPQHPA 10
          ++NFGPQHPA
Sbjct: 10 SINFGPQHPA 19


>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 16 INFGPQHPA 24


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1  TLNFGPQHPA 10
          TLN GPQHPA
Sbjct: 9  TLNLGPQHPA 18


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC

Query: 1  TLNFGPQHPA 10
          ++NFGPQHPA
Sbjct: 10 SINFGPQHPA 19


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 19 INFGPQHPA 27


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  TLNFGPQHPA 10
          TLNFGP HPA
Sbjct: 8  TLNFGPVHPA 17


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  TLNFGPQHPA 10
          TLNFGP HPA
Sbjct: 8  TLNFGPVHPA 17


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  TLNFGPQHPA 10
          TLNFGP HPA
Sbjct: 8  TLNFGPVHPA 17


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 22 INFGPQHPA 30


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 23 INFGPQHPA 31


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1  TLNFGPQHPA 10
          TLN GPQHPA
Sbjct: 9  TLNLGPQHPA 18


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1  TLNFGPQHPA 10
          TLN GPQHPA
Sbjct: 9  TLNLGPQHPA 18


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_SULDN|NADH-QUINONE oxidoreductase subunit D|Sulfurimonas denitrificans (strain ATCC

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 25 LNFGPQHPS 33


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1  TLNFGPQHPA 10
          ++NFGPQHPA
Sbjct: 10 SINFGPQHPA 19


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana

Query: 1  TLNFGPQHPA 10
          T NFGPQHPA
Sbjct: 12 TSNFGPQHPA 21


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  TLNFGPQHPA 10
          TLNFGP HPA
Sbjct: 8  TLNFGPVHPA 17


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  TLNFGPQHPA 10
          TLNFGP HPA
Sbjct: 8  TLNFGPVHPA 17


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  TLNFGPQHPA 10
          TLNFGP HPA
Sbjct: 8  TLNFGPVHPA 17


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp.

Query: 1  TLNFGPQHPA 10
          TLNFGP HPA
Sbjct: 8  TLNFGPVHPA 17


>sp|NUOD1_THEYD|NADH-QUINONE oxidoreductase subunit D 1|Thermodesulfovibrio yellowstonii

Query: 1  TLNFGPQHPA 10
          T+N GPQHPA
Sbjct: 12 TVNMGPQHPA 21


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1  TLNFGPQHPA 10
          TLN GPQHPA
Sbjct: 9  TLNIGPQHPA 18


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 23 INFGPQHPA 31


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1  TLNFGPQHPA 10
          TLNFGP HPA
Sbjct: 8  TLNFGPVHPA 17


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 28 INFGPQHPA 36


>sp|NUOD_HELHP|NADH-QUINONE oxidoreductase subunit D|Helicobacter hepaticus (strain ATCC

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 26 LNFGPQHPS 34


>sp|NUOD_BARBK|NADH-QUINONE oxidoreductase subunit D|Bartonella bacilliformis (strain ATCC

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 11 INFGPQHPA 19


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 15 INFGPQHPA 23


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 19 INFGPQHPA 27


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1  TLNFGPQHPA 10
          T+NFGP+HP+
Sbjct: 10 TINFGPEHPS 19


>sp|NUOD_HELPY|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain ATCC 700392

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 26 LNFGPQHPS 34


>sp|NUOD_HELPH|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain HPAG1)

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 26 LNFGPQHPS 34


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 19 INFGPQHPA 27


>sp|NUOD2_OPITP|NADH-QUINONE oxidoreductase subunit D 2|Opitutus terrae (strain DSM 11246

Query: 1  TLNFGPQHPA 10
          T+N GPQHPA
Sbjct: 41 TINLGPQHPA 50


>sp|NUOD_HELPG|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain G27)

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 26 LNFGPQHPS 34


>sp|NUOD_HELPJ|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain J99 /

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 26 LNFGPQHPS 34


>sp|NUOD_HELP2|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain P12)

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 26 LNFGPQHPS 34


>sp|NUOD_HELAH|NADH-QUINONE oxidoreductase subunit D|Helicobacter acinonychis (strain Sheeba)

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 26 LNFGPQHPS 34


>sp|NUOD1_CHLT3|NADH-QUINONE oxidoreductase subunit D 1|Chloroherpeton thalassium (strain ATCC

Query: 2  LNFGPQHPA 10
          LN GPQHPA
Sbjct: 59 LNMGPQHPA 67


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 2  LNFGPQHPA 10
          +NFGPQHPA
Sbjct: 33 INFGPQHPA 41


>sp|NUOD_HELPS|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain Shi470)

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 26 LNFGPQHPS 34


>sp|NUOD_CITBB|NADH-QUINONE oxidoreductase subunit D|Citrifermentans bemidjiense (strain ATCC

Query: 1  TLNFGPQHPA 10
          TLN GPQHP+
Sbjct: 7  TLNMGPQHPS 16


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 2  LNFGPQHPA 10
          LN GPQHPA
Sbjct: 15 LNLGPQHPA 23


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 2  LNFGPQHPA 10
          LN GPQHPA
Sbjct: 15 LNLGPQHPA 23


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 2  LNFGPQHPA 10
          LNFGPQHP+
Sbjct: 35 LNFGPQHPS 43


>sp|NUOD_SULNB|NADH-QUINONE oxidoreductase subunit D|Sulfurovum sp. (strain NBC37-1)

Query: 2  LNFGPQHPA 10
          +NFGPQHP+
Sbjct: 25 INFGPQHPS 33


>sp|NUOD_NITSB|NADH-QUINONE oxidoreductase subunit D|Nitratiruptor sp. (strain SB155-2)

Query: 2  LNFGPQHPA 10
          +NFGPQHP+
Sbjct: 25 VNFGPQHPS 33


>sp|NUOD_WOLSU|NADH-QUINONE oxidoreductase subunit D|Wolinella succinogenes (strain ATCC

Query: 2  LNFGPQHPA 10
          +NFGPQHP+
Sbjct: 25 INFGPQHPS 33


>sp|SYFA_BIFLS|PHENYLALANINE--TRNA ligase alpha subunit|Bifidobacterium longum subsp. infantis (strain

Query: 1   TLNFGPQHPA 10
           +LNFGP HPA
Sbjct: 150 SLNFGPDHPA 159


>sp|NDHH_SYNJB|NAD(P)H-QUINONE oxidoreductase subunit H|Synechococcus sp. (strain

Query: 2  LNFGPQHPA 10
          LNFGP HP+
Sbjct: 11 LNFGPHHPS 19


>sp|NDHH_SYNJA|NAD(P)H-QUINONE oxidoreductase subunit H|Synechococcus sp. (strain JA-3-3Ab)

Query: 2  LNFGPQHPA 10
          LNFGP HP+
Sbjct: 13 LNFGPHHPS 21


>sp|NUOD_SYNFM|NADH-QUINONE oxidoreductase subunit D|Syntrophobacter fumaroxidans (strain DSM

Query: 1  TLNFGPQHPA 10
          TLN GPQHP+
Sbjct: 15 TLNLGPQHPS 24


>sp|NUOD_SALRD|NADH-QUINONE oxidoreductase subunit D|Salinibacter ruber (strain DSM 13855

Query: 2  LNFGPQHPA 10
          LN GPQHPA
Sbjct: 69 LNIGPQHPA 77


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1  TLNFGPQHPA 10
          T+N GPQHPA
Sbjct: 24 TVNVGPQHPA 33


>sp|SYFA_BIFLO|PHENYLALANINE--TRNA ligase alpha subunit|Bifidobacterium longum (strain NCC 2705)

Query: 1   TLNFGPQHPA 10
           +LNFGP HPA
Sbjct: 150 SLNFGPDHPA 159


>sp|NDHH_SYNR3|NAD(P)H-QUINONE oxidoreductase subunit H|Synechococcus sp. (strain RCC307)

Query: 2  LNFGPQHPA 10
          LNFGP HP+
Sbjct: 13 LNFGPHHPS 21


>sp|NUOD2_CYTH3|NADH-QUINONE oxidoreductase subunit D 2|Cytophaga hutchinsonii (strain ATCC

Query: 1  TLNFGPQHPA 10
          TLN GP HPA
Sbjct: 8  TLNLGPTHPA 17


>sp|NUOD_GEOUR|NADH-QUINONE oxidoreductase subunit D|Geotalea uraniireducens (strain Rf4)

Query: 1  TLNFGPQHPA 10
          T+N GPQHP+
Sbjct: 8  TINMGPQHPS 17


>sp|SYFA_BIFA0|PHENYLALANINE--TRNA ligase alpha subunit|Bifidobacterium animalis subsp. lactis (strain

Query: 2   LNFGPQHPA 10
           LNFGP HPA
Sbjct: 151 LNFGPDHPA 159




18|Sequence|86|95|PQHPAAHGVL

>sp|NDUS2_TRYBB|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Trypanosoma brucei brucei

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 17 PQHPAAHGVL 26


>sp|NDUS2_PARTE|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Paramecium tetraurelia

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 10 PQHPAAHGVL 19


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 23 PQHPAAHGVL 32


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 23 PQHPAAHGVL 32


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 21 PQHPAAHGVL 30


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 24 PQHPAAHGVL 33


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 21 PQHPAAHGVL 30


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 19 PQHPAAHGVL 28


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 17 PQHPAAHGVL 26


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 14 PQHPAAHGVL 23


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   PQHPAAHGVL 10
           PQHPAAHGVL
Sbjct: 105 PQHPAAHGVL 114


>sp|NDUS2_NYCOV|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Nyctotherus ovalis (Ciliate

Query: 1  PQHPAAHGVL 10
          PQHPA+HGVL
Sbjct: 33 PQHPASHGVL 42


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 21 PQHPAAHGVL 30


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 21 PQHPAAHGVL 30


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 31 PQHPAAHGVL 40


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 31 PQHPAAHGVL 40


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 20 PQHPAAHGVL 29


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 14 PQHPAAHGVL 23


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 14 PQHPAAHGVL 23


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 14 PQHPAAHGVL 23


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 21 PQHPAAHGVL 30


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 31 PQHPAAHGVL 40


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 14 PQHPAAHGVL 23


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 31 PQHPAAHGVL 40


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 31 PQHPAAHGVL 40


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 31 PQHPAAHGVL 40


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 31 PQHPAAHGVL 40


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 31 PQHPAAHGVL 40


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 31 PQHPAAHGVL 40


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 31 PQHPAAHGVL 40


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 25 PQHPAAHGVL 34


>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 20 PQHPAAHGVL 29


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv.

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 31 PQHPAAHGVL 40


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 34 PQHPAAHGVL 43


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 31 PQHPAAHGVL 40


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 14 PQHPAAHGVL 23


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 14 PQHPAAHGVL 23


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 33 PQHPAAHGVL 42


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp.

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 24 PQHPAAHGVL 33


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 26 PQHPAAHGVL 35


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 32 PQHPAAHGVL 41


>sp|NUOD1_THEYD|NADH-QUINONE oxidoreductase subunit D 1|Thermodesulfovibrio yellowstonii

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 17 PQHPATHGVL 26


>sp|NUOCD_PHOV8|NADH-QUINONE oxidoreductase subunit C/D|Phocaeicola vulgatus (strain ATCC 8482

Query: 1   PQHPAAHGVL 10
           PQHPA HGVL
Sbjct: 167 PQHPATHGVL 176


>sp|NUOD_DESPS|NADH-QUINONE oxidoreductase subunit D|Desulfotalea psychrophila (strain LSv54

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 19 PQHPATHGVL 28


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 24 PQHPAAHGVL 33


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 33 PQHPAAHGVL 42


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 12 PQHPAAHGVL 21


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD2_OPITP|NADH-QUINONE oxidoreductase subunit D 2|Opitutus terrae (strain DSM 11246

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 46 PQHPAAHGVL 55


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 26 PQHPAAHGVL 35


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGV+
Sbjct: 16 PQHPAAHGVM 25


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGV+
Sbjct: 16 PQHPAAHGVM 25


>sp|NUOD1_CHLT3|NADH-QUINONE oxidoreductase subunit D 1|Chloroherpeton thalassium (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 63 PQHPATHGVL 72


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 28 PQHPAAHGVL 37


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 31 PQHPAAHGVL 40


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 27 PQHPAAHGVL 36


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 27 PQHPAAHGVL 36


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 86 PQHPAAHGVL 95


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 19 PQHPAAHGVL 28


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 31 PQHPAAHGVL 40


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 27 PQHPAAHGVL 36


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 19 PQHPAAHGVL 28


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 37 PQHPAAHGVL 46


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_BARBK|NADH-QUINONE oxidoreductase subunit D|Bartonella bacilliformis (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 86 PQHPAAHGVL 95


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 32 PQHPAAHGVL 41


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 25 PQHPAAHGVL 34


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_AMOA5|NADH-QUINONE oxidoreductase subunit D|Amoebophilus asiaticus (strain 5a2)

Query: 1  PQHPAAHGVL 10
          PQHPA HG+L
Sbjct: 36 PQHPATHGIL 45


>sp|NUOCD_BACTN|NADH-QUINONE oxidoreductase subunit C/D|Bacteroides thetaiotaomicron (strain

Query: 1   PQHPAAHGVL 10
           PQHPA HGV+
Sbjct: 178 PQHPATHGVM 187


>sp|NUOCD_BACFR|NADH-QUINONE oxidoreductase subunit C/D|Bacteroides fragilis (strain YCH46)

Query: 1   PQHPAAHGVL 10
           PQHPA HGV+
Sbjct: 178 PQHPATHGVM 187


>sp|NUOCD_BACFN|NADH-QUINONE oxidoreductase subunit C/D|Bacteroides fragilis (strain ATCC 25285

Query: 1   PQHPAAHGVL 10
           PQHPA HGV+
Sbjct: 178 PQHPATHGVM 187


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 25 PQHPAAHGVL 34


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGV+
Sbjct: 16 PQHPAAHGVM 25


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGV+
Sbjct: 16 PQHPAAHGVM 25


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1  PQHPAAHGVL 10
          PQHP+AHGVL
Sbjct: 13 PQHPSAHGVL 22


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1  PQHPAAHGVL 10
          PQHP+AHGVL
Sbjct: 13 PQHPSAHGVL 22


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGV+
Sbjct: 18 PQHPAAHGVM 27


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 86 PQHPAAHGVL 95


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 19 PQHPATHGVL 28


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 12 PQHPATHGVL 21


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 19 PQHPATHGVL 28


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 1  PQHPAAHGVL 10
          PQHPAAHG+L
Sbjct: 33 PQHPAAHGLL 42


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 12 PQHPATHGVL 21


>sp|NUOD_CHLPB|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeobacteroides (strain BS1)

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 39 PQHPSTHGVL 48


>sp|NUOD_CHLTE|NADH-QUINONE oxidoreductase subunit D|Chlorobaculum tepidum (strain ATCC 49652

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 39 PQHPSTHGVL 48


>sp|NUOD_CHLL2|NADH-QUINONE oxidoreductase subunit D|Chlorobium limicola (strain DSM 245

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 34 PQHPSTHGVL 43


>sp|NUOD_PELPB|NADH-QUINONE oxidoreductase subunit D|Pelodictyon phaeoclathratiforme (strain

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 39 PQHPSTHGVL 48


>sp|NUOD_CHLP8|NADH-QUINONE oxidoreductase subunit D|Chlorobaculum parvum (strain DSM 263

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 39 PQHPSTHGVL 48


>sp|NUOD_CHLCH|NADH-QUINONE oxidoreductase subunit D|Chlorobium chlorochromatii (strain CaD3)

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 39 PQHPSTHGVL 48


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 11 PQHPAAHGVL 20


>sp|NUOD_SALRD|NADH-QUINONE oxidoreductase subunit D|Salinibacter ruber (strain DSM 13855

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 73 PQHPATHGVL 82


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGV+
Sbjct: 21 PQHPAAHGVM 30


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 14 PQHPATHGVL 23


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1  PQHPAAHGVL 10
          PQHP+AHGVL
Sbjct: 13 PQHPSAHGVL 22


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1  PQHPAAHGVL 10
          PQHP+AHGVL
Sbjct: 13 PQHPSAHGVL 22


>sp|NUOD1_CYTH3|NADH-QUINONE oxidoreductase subunit D 1|Cytophaga hutchinsonii (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 25 PQHPSTHGVL 34


>sp|NUOD_CHLL3|NADH-QUINONE oxidoreductase subunit D|Chlorobium luteolum (strain DSM 273

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 34 PQHPSTHGVL 43


>sp|NUOD2_SOLUE|NADH-QUINONE oxidoreductase subunit D 2|Solibacter usitatus (strain Ellin6076)

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 18 PQHPSTHGVL 27


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 14 PQHPATHGVL 23


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 14 PQHPATHGVL 23


>sp|NUOD_CHLPD|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeobacteroides (strain DSM

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 39 PQHPSTHGVL 48


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NDHH_WHEAT|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Triticum aestivum (Wheat)

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_TRISU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Trifolium subterraneum

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_TOBAC|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nicotiana tabacum (Common

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_SORBI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Sorghum bicolor (Sorghum)

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_SOLTU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Solanum tuberosum

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_SOLLC|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Solanum lycopersicum

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_SOLBU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Solanum bulbocastanum

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_SACOF|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Saccharum officinarum

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_SACHY|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Saccharum hybrid

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_RANMC|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Ranunculus macranthus

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_PANGI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Panax ginseng (Korean

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_ORYSJ|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza sativa subsp.

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_ORYSI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza sativa subsp.

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_ORYSA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza sativa (Rice)

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_ORYNI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza nivara (Indian wild

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_NICTO|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nicotiana tomentosiformis

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_NICSY|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nicotiana sylvestris

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_NANDO|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nandina domestica

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_MAIZE|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Zea mays (Maize)

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_LOLPR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Lolium perenne (Perennial

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_LEMMI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Lemna minor (Common

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 19 PQHPSMHGVL 28


>sp|NDHH_HORVU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Hordeum vulgare (Barley)

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_FESAR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Festuca arundinacea (Tall

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_DAUCA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Daucus carota (Wild

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_CICAR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Cicer arietinum

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_BRADI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Brachypodium distachyon

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_ATRBE|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Atropa belladonna

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_ANGEV|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Angiopteris evecta

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_AGRST|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Agrostis stolonifera

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NDHH_ACAM1|NAD(P)H-QUINONE oxidoreductase subunit H|Acaryochloris marina (strain MBIC 11017)

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_HELMI|NADH-QUINONE oxidoreductase subunit D|Heliobacterium modesticaldum (strain

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 12 PQHPSTHGVL 21


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD1_SOLUE|NADH-QUINONE oxidoreductase subunit D 1|Solibacter usitatus (strain Ellin6076)

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 32 PQHPSTHGVL 41


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 23 PQHPAAHGVL 32


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 14 PQHPATHGVL 23


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 14 PQHPATHGVL 23


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 14 PQHPATHGVL 23


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 14 PQHPATHGVL 23


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 21 PQHPAAHGVL 30


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   PQHPAAHGVL 10
           PQHPAAHGVL
Sbjct: 101 PQHPAAHGVL 110


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 17 PQHPAAHGVL 26


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NDHH_CERDE|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Ceratophyllum demersum

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 35 PQHPAAHGVL 44


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 17 PQHPAAHGVL 26


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 24 PQHPAAHGVL 33


>sp|NDHH_FAGEA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Fagopyrum esculentum

Query: 1  PQHPAAHGVL 10
          PQHP+ HGVL
Sbjct: 17 PQHPSMHGVL 26


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 13 PQHPAAHGVL 22


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 86 PQHPAAHGVL 95


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 86 PQHPAAHGVL 95


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 86 PQHPAAHGVL 95


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 21 PQHPAAHGVL 30


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 15 PQHPAAHGVL 24


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 23 PQHPAAHGVL 32


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 86 PQHPAAHGVL 95


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1  PQHPAAHGVL 10
          PQHPA HGVL
Sbjct: 14 PQHPATHGVL 23


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  PQHPAAHGVL 10
          PQHPAAHGVL
Sbjct: 21 PQHPAAHGVL 30




19|Sequence|91|100|AHGVLRLVME

>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   AHGVLRLVME 10
           AHGVLRLVME
Sbjct: 91  AHGVLRLVME 100


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   AHGVLRLVME 10
           AHGVLRLVME
Sbjct: 91  AHGVLRLVME 100


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   AHGVLRLVME 10
           AHGVLRLVME
Sbjct: 91  AHGVLRLVME 100


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   AHGVLRLVME 10
           AHGVLRLVME
Sbjct: 91  AHGVLRLVME 100


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   AHGVLRLVME 10
           AHGVLRLVME
Sbjct: 91  AHGVLRLVME 100


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1  AHGVLRLVME 10
          AHGVLRLVME
Sbjct: 18 AHGVLRLVME 27


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1  AHGVLRLVME 10
          AHGVLRLVME
Sbjct: 18 AHGVLRLVME 27


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   AHGVLRLVME 10
           AHGVLRLV+E
Sbjct: 91  AHGVLRLVLE 100


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 24 AHGVLRLVLE 33


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 44 AHGVLRLVLE 53


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 19 AHGVLRLILE 28


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM

Query: 1  AHGVLRLVME 10
          AHGVLR+VME
Sbjct: 32 AHGVLRMVME 41


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1  AHGVLRLVME 10
          AHGVLR+VME
Sbjct: 30 AHGVLRMVME 39


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1  AHGVLRLVME 10
          AHGVLR+VME
Sbjct: 33 AHGVLRMVME 42


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGV+RLV+E
Sbjct: 21 AHGVMRLVLE 30


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 29 AHGVLRLILE 38


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1  AHGVLRLVME 10
          AHGV+RLV+E
Sbjct: 21 AHGVMRLVLE 30


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain

Query: 1  AHGVLRLVME 10
          AHGVLR++ME
Sbjct: 30 AHGVLRMIME 39


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 18 AHGVLRLILE 27


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1  AHGVLRLVME 10
          AHGVLR+V+E
Sbjct: 38 AHGVLRMVLE 47


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 24 AHGVLRLVLE 33


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 26 AHGVLRLVLE 35


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   AHGVLRLVME 10
           AHGVLRLV+E
Sbjct: 91  AHGVLRLVLE 100


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 26 AHGVLRLVLE 35


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 42 AHGVLRLVLE 51


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 26 AHGVLRLILE 35


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1  AHGVLRLVME 10
          AHGV+RLV+E
Sbjct: 21 AHGVMRLVLE 30


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1  AHGVLRLVME 10
          AHGV+RL++E
Sbjct: 23 AHGVMRLILE 32


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain

Query: 1  AHGVLRLVME 10
          AHGV+RLV+E
Sbjct: 21 AHGVMRLVLE 30


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 22 AHGVLRLVLE 31


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 18 AHGVLRLILE 27


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 24 AHGVLRLVLE 33


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp.

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 37 AHGVLRLVLE 46


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 30 AHGVLRLVLE 39


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 28 AHGVLRLVLE 37


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 26 AHGVLRLVLE 35


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 25 AHGVLRLVLE 34


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 39 AHGVLRLVLE 48


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 29 AHGVLRLVLE 38


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 29 AHGVLRLVLE 38


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 37 AHGVLRLVLE 46


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 28 AHGVLRLVLE 37


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 40 AHGVLRLVLE 49


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 29 AHGVLRLVLE 38


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 22 AHGVLRLVLE 31


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NDUS2_SOLTU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Solanum tuberosum

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 22 AHGVLRLVLE 31


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 32 AHGVLRLVLE 41


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 26 AHGVLRLVLE 35


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 31 AHGVLRLVLE 40


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 31 AHGVLRLVLE 40


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 22 AHGVLRLVLE 31


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 18 AHGVLRLVLE 27


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 26 AHGVLRLVLE 35


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 26 AHGVLRLVLE 35


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 26 AHGVLRLVLE 35


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 22 AHGVLRLVLE 31


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1  AHGVLRLVME 10
          AHGVLRL+M+
Sbjct: 16 AHGVLRLIMQ 25


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain

Query: 1  AHGVLRLVME 10
          AHGVLRLV+E
Sbjct: 20 AHGVLRLVLE 29


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 18 AHGVLRLILE 27


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv.

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 36 AHGVLRLILE 45


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 36 AHGVLRLILE 45


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 20 AHGVLRLILE 29


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 18 AHGVLRLILE 27


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 18 AHGVLRLILE 27


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 36 AHGVLRLILE 45


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 36 AHGVLRLILE 45


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 36 AHGVLRLILE 45


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 36 AHGVLRLILE 45


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 36 AHGVLRLILE 45


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 36 AHGVLRLILE 45


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 36 AHGVLRLILE 45


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 36 AHGVLRLILE 45


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 18 AHGVLRLILE 27


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 18 AHGVLRLILE 27


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 18 AHGVLRLILE 27


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp.

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 18 AHGVLRLILE 27


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 18 AHGVLRLILE 27


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 18 AHGVLRLILE 27


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1  AHGVLRLVME 10
          AHGV+RL++E
Sbjct: 26 AHGVMRLILE 35


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 36 AHGVLRLILE 45


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 36 AHGVLRLILE 45


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 18 AHGVLRLIVE 27


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 26 AHGVLRLILE 35


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   AHGVLRLVME 10
           AHGVLRL++E
Sbjct: 106 AHGVLRLILE 115


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 18 AHGVLRLILE 27


>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 25 AHGVLRLLLE 34


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 36 AHGVLRLILE 45


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 36 AHGVLRLILE 45


>sp|NUOD_SACEN|NADH-QUINONE oxidoreductase subunit D|Saccharopolyspora erythraea (strain ATCC

Query: 1  AHGVLRLVME 10
          AHGVLRLV E
Sbjct: 61 AHGVLRLVFE 70


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1  AHGVLRLVME 10
           HGVLRL+ME
Sbjct: 34 THGVLRLIME 43


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 1  AHGVLRLVME 10
          AHGVLR+V+E
Sbjct: 20 AHGVLRMVLE 29


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 1  AHGVLRLVME 10
          AHGVLR+V+E
Sbjct: 20 AHGVLRMVLE 29


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1  AHGVLRLVME 10
          AHGVLRL++E
Sbjct: 28 AHGVLRLIVE 37




20|Sequence|96|105|RLVMELSGEM

>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   RLVMELSGEM 10
           RLVMELSGEM
Sbjct: 96  RLVMELSGEM 105


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   RLVMELSGEM 10
           RLVMELSGEM
Sbjct: 96  RLVMELSGEM 105


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   RLVMELSGEM 10
           RLVMELSGEM
Sbjct: 96  RLVMELSGEM 105


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   RLVMELSGEM 10
           RLVMELSGEM
Sbjct: 96  RLVMELSGEM 105


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   RLVMELSGEM 10
           RLVMELSGEM
Sbjct: 96  RLVMELSGEM 105


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   RLVMELSGEM 10
           RLV+ELSGEM
Sbjct: 96  RLVLELSGEM 105


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   RLVMELSGEM 10
           RLV+ELSGEM
Sbjct: 96  RLVLELSGEM 105




21|Sequence|101|110|LSGEMVRKCD

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   LSGEMVRKCD 10
           LSGEMVRKCD
Sbjct: 101 LSGEMVRKCD 110


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   LSGEMVRKCD 10
           LSGEMVRKCD
Sbjct: 101 LSGEMVRKCD 110


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   LSGEMVRKCD 10
           LSGEMVRKCD
Sbjct: 101 LSGEMVRKCD 110


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   LSGEMVRKCD 10
           LSGEMVRKCD
Sbjct: 101 LSGEMVRKCD 110


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   LSGEMVRKCD 10
           LSGEMVRKCD
Sbjct: 101 LSGEMVRKCD 110


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   LSGEMVRKCD 10
           LSGEMVRKCD
Sbjct: 101 LSGEMVRKCD 110


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   LSGEMVRKCD 10
           LSGEMVRKCD
Sbjct: 101 LSGEMVRKCD 110




22|Sequence|106|115|VRKCDPHIGL

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   VRKCDPHIGL 10
           VRKCDPHIGL
Sbjct: 106 VRKCDPHIGL 115


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   VRKCDPHIGL 10
           VRKCDPHIGL
Sbjct: 106 VRKCDPHIGL 115


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   VRKCDPHIGL 10
           VRKCDPHIGL
Sbjct: 106 VRKCDPHIGL 115


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   VRKCDPHIGL 10
           VRKCDPHIGL
Sbjct: 106 VRKCDPHIGL 115


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   VRKCDPHIGL 10
           VRKCDPHIGL
Sbjct: 106 VRKCDPHIGL 115


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   VRKCDPHIGL 10
           VRKCDPHIGL
Sbjct: 106 VRKCDPHIGL 115


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   VRKCDPHIGL 10
           VRKCDPHIGL
Sbjct: 106 VRKCDPHIGL 115


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1  VRKCDPHIGL 10
          VRK DPHIGL
Sbjct: 44 VRKADPHIGL 53


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040)

Query: 1  VRKCDPHIGL 10
          V +CDPHIGL
Sbjct: 45 VERCDPHIGL 54


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1  VRKCDPHIGL 10
          V +CDPHIGL
Sbjct: 47 VERCDPHIGL 56


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  VRKCDPHIGL 10
          V +CDPHIGL
Sbjct: 46 VERCDPHIGL 55


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  VRKCDPHIGL 10
          V +CDPHIGL
Sbjct: 44 VERCDPHIGL 53


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  VRKCDPHIGL 10
          V +CDPHIGL
Sbjct: 44 VERCDPHIGL 53


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1  VRKCDPHIGL 10
          V +CDPHIGL
Sbjct: 46 VERCDPHIGL 55


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1  VRKCDPHIGL 10
          V +CDPHIGL
Sbjct: 47 VERCDPHIGL 56


>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)

Query: 1  VRKCDPHIG 9
          +R+CDPHIG
Sbjct: 32 LRRCDPHIG 40


>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)

Query: 1  VRKCDPHIG 9
          +R+CDPHIG
Sbjct: 32 LRRCDPHIG 40


>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)

Query: 1  VRKCDPHIG 9
          +R+CDPHIG
Sbjct: 32 LRRCDPHIG 40


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1  VRKCDPHIGL 10
          VR+ DPHIGL
Sbjct: 33 VRRADPHIGL 42


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1  VRKCDPHIGL 10
          VR+ DPHIGL
Sbjct: 33 VRRADPHIGL 42


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 3  KCDPHIGL 10
          +CDPHIGL
Sbjct: 56 RCDPHIGL 63


>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)

Query: 1  VRKCDPHIGL 10
          +R+CDP IGL
Sbjct: 36 LRRCDPQIGL 45


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1  VRKCDPHIGL 10
          +R+ DPHIGL
Sbjct: 33 IRRADPHIGL 42


>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human

Query: 1  VRKCDPHIGL 10
          +R+CDP IGL
Sbjct: 36 LRRCDPQIGL 45


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1  VRKCDPHIGL 10
          +R+ DPHIGL
Sbjct: 33 IRRADPHIGL 42


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1  VRKCDPHIGL 10
          VR+ DPHIGL
Sbjct: 35 VRRVDPHIGL 44


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1  VRKCDPHIGL 10
          V K DPHIGL
Sbjct: 34 VEKADPHIGL 43




23|Sequence|111|120|PHIGLLHRGT

>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 48 PHIGLLHRGT 57


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 48 PHIGLLHRGT 57


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 56 PHIGLLHRGT 65


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 56 PHIGLLHRGT 65


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 56 PHIGLLHRGT 65


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 56 PHIGLLHRGT 65


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 56 PHIGLLHRGT 65


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 56 PHIGLLHRGT 65


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 56 PHIGLLHRGT 65


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 56 PHIGLLHRGT 65


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 56 PHIGLLHRGT 65


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 56 PHIGLLHRGT 65


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv.

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 56 PHIGLLHRGT 65


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 56 PHIGLLHRGT 65


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 46 PHIGLLHRGT 55


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 45 PHIGLLHRGT 54


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 44 PHIGLLHRGT 53


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 44 PHIGLLHRGT 53


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 41 PHIGLLHRGT 50


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 44 PHIGLLHRGT 53


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 49 PHIGLLHRGT 58


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 38 PHIGLLHRGT 47


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 41 PHIGLLHRGT 50


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 46 PHIGLLHRGT 55


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 38 PHIGLLHRGT 47


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 46 PHIGLLHRGT 55


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 60 PHIGLLHRGT 69


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   PHIGLLHRGT 10
           PHIGLLHRGT
Sbjct: 111 PHIGLLHRGT 120


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 58 PHIGLLHRGT 67


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 46 PHIGLLHRGT 55


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 46 PHIGLLHRGT 55


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 42 PHIGLLHRGT 51


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 37 PHIGLLHRGT 46


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 38 PHVGLLHRGT 47


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 38 PHIGLLHRGT 47


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 37 PHIGLLHRGT 46


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 41 PHIGLLHRGT 50


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 41 PHIGLLHRGT 50


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 43 PHIGLLHRGT 52


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   PHIGLLHRGT 10
           PHIGLLHRGT
Sbjct: 111 PHIGLLHRGT 120


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 38 PHIGLLHRGT 47


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 50 PHIGLLHRGT 59


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 62 PHIGLLHRGT 71


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 38 PHIGLLHRGT 47


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   PHIGLLHRGT 10
           PHIGLLHRGT
Sbjct: 111 PHIGLLHRGT 120


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 58 PHIGLLHRGT 67


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 38 PHIGLLHRGT 47


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   PHIGLLHRGT 10
           PHIGLLHRGT
Sbjct: 111 PHIGLLHRGT 120


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   PHIGLLHRGT 10
           PHIGLLHRGT
Sbjct: 111 PHIGLLHRGT 120


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 46 PHIGLLHRGT 55


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 46 PHIGLLHRGT 55


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 38 PHIGLLHRGT 47


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   PHIGLLHRGT 10
           PHIGLLHRGT
Sbjct: 111 PHIGLLHRGT 120


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 46 PHIGLLHRGT 55


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   PHIGLLHRGT 10
           PHIGLLHRGT
Sbjct: 111 PHIGLLHRGT 120


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 48 PHIGLLHRGT 57


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 44 PHIGLLHRGT 53


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 58 PHIGLLHRGT 67


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 49 PHIGLLHRGT 58


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 38 PHVGLLHRGT 47


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 38 PHVGLLHRGT 47


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 38 PHIGLLHRGT 47


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 42 PHIGLLHRGT 51


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 38 PHIGLLHRGT 47


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 59 PHIGLLHRGT 68


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 38 PHIGLLHRGT 47


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 51 PHIGLLHRGT 60


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 42 PHIGLLHRGT 51


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 46 PHIGLLHRGT 55


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 38 PHIGLLHRGT 47


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 38 PHVGLLHRGT 47


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 38 PHVGLLHRGT 47


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 38 PHVGLLHRGT 47


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 49 PHIGLLHRGT 58


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 39 PHIGLLHRGT 48


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 46 PHIGLLHRGT 55


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 38 PHVGLLHRGT 47


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp.

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 38 PHVGLLHRGT 47


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 38 PHIGLLHRGT 47


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 49 PHIGLLHRGT 58


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 42 PHIGLLHRGT 51


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 57 PHIGLLHRGT 66


>sp|NUOD_BARBK|NADH-QUINONE oxidoreductase subunit D|Bartonella bacilliformis (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 53 PHVGLLHRGT 62


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 45 PHVGLLHRGT 54


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 38 PHVGLLHRGT 47


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 51 PHIGLLHRGT 60


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 52 PHVGLLHRGT 61


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 52 PHIGLLHRGT 61


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 56 PHVGLLHRGT 65


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 57 PHVGLLHRGT 66


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 48 PHIGLLHRGT 57


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 56 PHVGLLHRGT 65


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 40 PHVGLLHRGT 49


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 50 PHVGLLHRGT 59


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 50 PHVGLLHRGT 59


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 40 PHIGLLHRGT 49


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 48 PHIGLLHRGT 57


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC

Query: 1  PHIGLLHRGT 10
          PH+GLLHRGT
Sbjct: 44 PHVGLLHRGT 53


>sp|NUOD2_RHIEC|NADH-QUINONE oxidoreductase subunit D 2|Rhizobium etli (strain ATCC 51251

Query: 1  PHIGLLHRGT 10
          PHIG LHRGT
Sbjct: 51 PHIGYLHRGT 60


>sp|NUOD2_RHIE6|NADH-QUINONE oxidoreductase subunit D 2|Rhizobium etli (strain CIAT 652)

Query: 1  PHIGLLHRGT 10
          PHIG LHRGT
Sbjct: 51 PHIGYLHRGT 60


>sp|NUOD2_SINMW|NADH-QUINONE oxidoreductase subunit D 2|Sinorhizobium medicae (strain WSM419)

Query: 1  PHIGLLHRGT 10
          PHIG LHRGT
Sbjct: 51 PHIGYLHRGT 60


>sp|NUOD2_RHIME|NADH-QUINONE oxidoreductase subunit D 2|Rhizobium meliloti (strain 1021)

Query: 1  PHIGLLHRGT 10
          PHIG LHRGT
Sbjct: 51 PHIGYLHRGT 60


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   PHIGLLHRGT 10
           PH+GLLHRGT
Sbjct: 126 PHVGLLHRGT 135


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 54 PHIGLLHRGT 63


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   PHIGLLHRGT 10
           PHIGLLHR T
Sbjct: 130 PHIGLLHRAT 139


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 64 PHIGLLHRGT 73


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHRGT
Sbjct: 52 PHIGLLHRGT 61


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1  PHIGLLHRGT 10
          PHIG LHRGT
Sbjct: 36 PHIGFLHRGT 45


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp.

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NDUS2_NYCOV|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Nyctotherus ovalis (Ciliate

Query: 1  PHIGLLHRGT 10
          PHIG LHRGT
Sbjct: 58 PHIGFLHRGT 67


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1  PHIGLLHRGT 10
          PH+GLLHR T
Sbjct: 38 PHVGLLHRAT 47


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana

Query: 1  PHIGLLHRGT 10
          PHIGLL RGT
Sbjct: 42 PHIGLLQRGT 51


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain

Query: 1  PHIGLLHRGT 10
          PHIGLLHR T
Sbjct: 38 PHIGLLHRAT 47


>sp|NDUS2_PARTE|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Paramecium tetraurelia

Query: 2  HIGLLHRGT 10
          HIGLLHRG+
Sbjct: 36 HIGLLHRGS 44


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 2  HIGLLHRGT 10
          HIGLLHRGT
Sbjct: 38 HIGLLHRGT 46


>sp|NUOD_GEOUR|NADH-QUINONE oxidoreductase subunit D|Geotalea uraniireducens (strain Rf4)

Query: 1  PHIGLLHRG 9
          PHIG LHRG
Sbjct: 38 PHIGYLHRG 46


>sp|NUOD_GEOSL|NADH-QUINONE oxidoreductase subunit D|Geobacter sulfurreducens (strain ATCC

Query: 1  PHIGLLHRG 9
          PHIG LHRG
Sbjct: 38 PHIGYLHRG 46


>sp|NUOD_GEOMG|NADH-QUINONE oxidoreductase subunit D|Geobacter metallireducens (strain ATCC

Query: 1  PHIGLLHRG 9
          PHIG LHRG
Sbjct: 38 PHIGYLHRG 46


>sp|NUOD_CITBB|NADH-QUINONE oxidoreductase subunit D|Citrifermentans bemidjiense (strain ATCC

Query: 1  PHIGLLHRG 9
          PHIG LHRG
Sbjct: 37 PHIGYLHRG 45




24|Sequence|116|125|LHRGTEKLIE

>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   LHRGTEKLIE 10
           LHRGTEKLIE
Sbjct: 116 LHRGTEKLIE 125


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   LHRGTEKLIE 10
           LHRGTEKLIE
Sbjct: 116 LHRGTEKLIE 125


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   LHRGTEKLIE 10
           LHRGTEKLIE
Sbjct: 116 LHRGTEKLIE 125


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 51 LHRGTEKLIE 60


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   LHRGTEKLIE 10
           LHRGTEKLIE
Sbjct: 116 LHRGTEKLIE 125


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 57 LHRGTEKLIE 66


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 51 LHRGTEKLIE 60


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   LHRGTEKLIE 10
           LHRGTEKLIE
Sbjct: 116 LHRGTEKLIE 125


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   LHRGTEKLIE 10
           LHRGTEKLIE
Sbjct: 116 LHRGTEKLIE 125


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 55 LHRGTEKLIE 64


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   LHRGTEKLIE 10
           LHRGTEKLIE
Sbjct: 116 LHRGTEKLIE 125


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 65 LHRGTEKLIE 74


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 51 LHRGTEKLIE 60


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 55 LHRGTEKLIE 64


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 50 LHRGTEKLIE 59


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 49 LHRGTEKLIE 58


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 58 LHRGTEKLIE 67


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 48 LHRGTEKLIE 57


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 51 LHRGTEKLIE 60


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 51 LHRGTEKLIE 60


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 54 LHRGTEKLIE 63


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 46 LHRGTEKLIE 55


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 47 LHRGTEKLIE 56


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 47 LHRGTEKLIE 56


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 69 LHRGTEKLIE 78


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 46 LHRGTEKLIE 55


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 53 LHRGTEKLIE 62


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 53 LHRGTEKLIE 62


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 54 LHRGTEKLIE 63


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 46 LHRGTEKLIE 55


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 41 LHRGTEKLIE 50


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 46 LHRGTEKLIE 55


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 47 LHRGTEKLIE 56


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 51 LHRGTEKLIE 60


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 47 LHRGTEKLIE 56


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 51 LHRGTEKLIE 60


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 49 LHRGTEKLIE 58


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 49 LHRGTEKLIE 58


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 49 LHRGTEKLIE 58


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 51 LHRGTEKLIE 60


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 44 LHRGTEKLIE 53


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 44 LHRGTEKLIE 53


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 51 LHRGTEKLIE 60


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 53 LHRGTEKLIE 62


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 43 LHRGTEKLIE 52


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 43 LHRGTEKLIE 52


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 43 LHRGTEKLIE 52


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 53 LHRGTEKLIE 62


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 53 LHRGTEKLIE 62


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 67 LHRGTEKLME 76


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 45 LHRGTEKLIE 54


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 44 LHRGTEKLIE 53


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 42 LHRGTEKLIE 51


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 44 LHRGTEKLIE 53


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 42 LHRGTEKLIE 51


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 44 LHRGTEKLIE 53


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 44 LHRGTEKLIE 53


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 44 LHRGTEKLIE 53


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 44 LHRGTEKLIE 53


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 44 LHRGTEKLIE 53


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 45 LHRGTEKLME 54


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 44 LHRGTEKLIE 53


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 42 LHRGTEKLLE 51


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1  LHRGTEKLIE 10
          LHRGTEKLIE
Sbjct: 59 LHRGTEKLIE 68


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 43 LHRGTEKLVE 52


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 43 LHRGTEKLVE 52


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 62 LHRGTEKLME 71


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 45 LHRGTEKLME 54


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 63 LHRGTEKLME 72


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 49 LHRGTEKLME 58


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 63 LHRGTEKLME 72


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 51 LHRGTEKLLE 60


>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 50 LHRGTEKLLE 59


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 63 LHRGTEKLME 72


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 45 LHRGTEKLME 54


>sp|NDUS2_TRYBB|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Trypanosoma brucei brucei

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 47 LHRGTEKLCE 56


>sp|NUOD_BARBK|NADH-QUINONE oxidoreductase subunit D|Bartonella bacilliformis (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 45 LHRGTEKLME 54


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 45 LHRGTEKLME 54


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 45 LHRGTEKLME 54


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 45 LHRGTEKLME 54


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 45 LHRGTEKLME 54


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 45 LHRGTEKLME 54


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 45 LHRGTEKLME 54


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 45 LHRGTEKLME 54


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 45 LHRGTEKLME 54


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 45 LHRGTEKLME 54


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 55 LHRGTEKLME 64


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 61 LHRGTEKLAE 70


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 61 LHRGTEKLAE 70


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 61 LHRGTEKLAE 70


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 61 LHRGTEKLAE 70


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 61 LHRGTEKLAE 70


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 61 LHRGTEKLAE 70


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 64 LHRGTEKLME 73


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 45 LHRGTEKLME 54


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 57 LHRGTEKLME 66


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 61 LHRGTEKLAE 70


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv.

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 61 LHRGTEKLAE 70


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 56 LHRGTEKLME 65


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 61 LHRGTEKLAE 70


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 61 LHRGTEKLAE 70


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 57 LHRGTEKLME 66


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 61 LHRGTEKLAE 70


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 61 LHRGTEKLAE 70


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 56 LHRGTEKLME 65


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 54 LHRGTEKLME 63


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKL+E
Sbjct: 54 LHRGTEKLME 63


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   LHRGTEKLIE 10
           LHR TEKLIE
Sbjct: 135 LHRATEKLIE 144


>sp|NUOD2_RHIE6|NADH-QUINONE oxidoreductase subunit D 2|Rhizobium etli (strain CIAT 652)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 56 LHRGTEKLAE 65


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NUOD2_RHIEC|NADH-QUINONE oxidoreductase subunit D 2|Rhizobium etli (strain ATCC 51251

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 56 LHRGTEKLAE 65


>sp|NUOD2_SINMW|NADH-QUINONE oxidoreductase subunit D 2|Sinorhizobium medicae (strain WSM419)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 56 LHRGTEKLAE 65


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   LHRGTEKLIE 10
           LHRGTEKL E
Sbjct: 131 LHRGTEKLCE 140


>sp|NDUS2_PARTE|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Paramecium tetraurelia

Query: 1  LHRGTEKLIE 10
          LHRG+EKL+E
Sbjct: 40 LHRGSEKLME 49


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NUOD2_RHIME|NADH-QUINONE oxidoreductase subunit D 2|Rhizobium meliloti (strain 1021)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 56 LHRGTEKLAE 65


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp.

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 61 LHRGTEKLAE 70


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 62 LHRGTEKLAE 71


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NDUS2_NYCOV|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Nyctotherus ovalis (Ciliate

Query: 1  LHRGTEKLIE 10
          LHRGTE+L+E
Sbjct: 63 LHRGTERLVE 72


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 61 LHRGTEKLAE 70


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 44 LHRGTEKLAE 53


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 44 LHRGTEKLAE 53


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 44 LHRGTEKLAE 53


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 44 LHRGTEKLAE 53


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 44 LHRGTEKLAE 53


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 44 LHRGTEKLAE 53


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1  LHRGTEKLIE 10
          LHRGTEKL E
Sbjct: 43 LHRGTEKLAE 52


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana

Query: 1  LHRGTEKLIE 10
          L RGTEKLIE
Sbjct: 47 LQRGTEKLIE 56


>sp|NUOD_BACCR|NADH-QUINONE oxidoreductase subunit D|Bacillus cereus (strain ATCC 14579

Query: 1  LHRGTEKLIE 10
          LHRGTEK+ E
Sbjct: 43 LHRGTEKIAE 52


>sp|NUOD_BACAN|NADH-QUINONE oxidoreductase subunit D|Bacillus anthracis

Query: 1  LHRGTEKLIE 10
          LHRGTEK+ E
Sbjct: 43 LHRGTEKIAE 52


>sp|NUOD_BACC1|NADH-QUINONE oxidoreductase subunit D|Bacillus cereus (strain ATCC 10987

Query: 1  LHRGTEKLIE 10
          LHRGTEK+ E
Sbjct: 43 LHRGTEKIAE 52


>sp|NUOD_BACAH|NADH-QUINONE oxidoreductase subunit D|Bacillus thuringiensis (strain Al Hakam)

Query: 1  LHRGTEKLIE 10
          LHRGTEK+ E
Sbjct: 43 LHRGTEKIAE 52


>sp|NUOD_DESRM|NADH-QUINONE oxidoreductase subunit D|Desulforamulus reducens (strain ATCC

Query: 1  LHRGTEKLIE 10
          LHRG EKL+E
Sbjct: 44 LHRGIEKLLE 53


>sp|NUOD_BACHK|NADH-QUINONE oxidoreductase subunit D|Bacillus thuringiensis subsp. konkukian

Query: 1  LHRGTEKLIE 10
          LHRGTEK+ E
Sbjct: 43 LHRGTEKIAE 52


>sp|NUOD_BACCZ|NADH-QUINONE oxidoreductase subunit D|Bacillus cereus (strain ZK /

Query: 1  LHRGTEKLIE 10
          LHRGTEK+ E
Sbjct: 43 LHRGTEKIAE 52


>sp|NUOD_BACMK|NADH-QUINONE oxidoreductase subunit D|Bacillus mycoides (strain KBAB4)

Query: 1  LHRGTEKLIE 10
          LHRGTEK+ E
Sbjct: 43 LHRGTEKIAE 52


>sp|NUOD_BACCN|NADH-QUINONE oxidoreductase subunit D|Bacillus cytotoxicus (strain DSM 22905

Query: 1  LHRGTEKLIE 10
          LHRGTEK+ E
Sbjct: 43 LHRGTEKIAE 52




25|Sequence|121|130|EKLIEYKTYL

>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 50 EKLIEYKTYL 59


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 52 EKLIEYKTYL 61


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   EKLIEYKTYL 10
           EKLIEYKTYL
Sbjct: 121 EKLIEYKTYL 130


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   EKLIEYKTYL 10
           EKLIEYKTYL
Sbjct: 121 EKLIEYKTYL 130


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   EKLIEYKTYL 10
           EKLIEYKTYL
Sbjct: 121 EKLIEYKTYL 130


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   EKLIEYKTYL 10
           EKLIEYKTYL
Sbjct: 121 EKLIEYKTYL 130


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 62 EKLIEYKTYL 71


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   EKLIEYKTYL 10
           EKLIEYKTYL
Sbjct: 121 EKLIEYKTYL 130


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 63 EKLIEYKTYL 72


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   EKLIEYKTYL 10
           EKLIEYKTYL
Sbjct: 121 EKLIEYKTYL 130


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   EKLIEYKTYL 10
           EKLIEYKTYL
Sbjct: 121 EKLIEYKTYL 130


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 52 EKLIEYKTYL 61


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 56 EKLIEYKTYL 65


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 50 EKLIEYKTYL 59


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 50 EKLIEYKTYL 59


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1  EKLIEYKTYL 10
          EKL+EYKTYL
Sbjct: 47 EKLLEYKTYL 56


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 50 EKLIEYKTYL 59


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC

Query: 1  EKLIEYKTYL 10
          EKLIEYKTY+
Sbjct: 54 EKLIEYKTYI 63


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 53 EKLIEYKTYL 62


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 51 EKLIEYKTYL 60


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 51 EKLIEYKTYL 60


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 51 EKLIEYKTYL 60


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1  EKLIEYKTYL 10
          EKLIEYK+YL
Sbjct: 58 EKLIEYKSYL 67


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1  EKLIEYKTY 9
          EKLIEYKTY
Sbjct: 74 EKLIEYKTY 82


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 51 EKLIEYKTYL 60


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1  EKLIEYKTYL 10
          EKLIEYK+YL
Sbjct: 64 EKLIEYKSYL 73


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1  EKLIEYKTYL 10
          EKLIEY+TYL
Sbjct: 50 EKLIEYRTYL 59


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 54 EKLIEYKTYL 63


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 70 EKLIEHKTYL 79


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 60 EKLIEHKTYL 69


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 50 EKLIEHKTYL 59


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 50 EKLIEHKTYL 59


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 60 EKLIEHKTYL 69


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1  EKLIEYKTYL 10
          EKLIEYKTYL
Sbjct: 54 EKLIEYKTYL 63


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 50 EKLIEHKTYL 59


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 50 EKLIEHKTYL 59


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1  EKLIEYKTY 9
          EKLIEYKTY
Sbjct: 56 EKLIEYKTY 64


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1  EKLIEYKTYL 10
          EKLIEYKTY+
Sbjct: 59 EKLIEYKTYI 68


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   EKLIEYKTYL 10
           EKL EY+TYL
Sbjct: 136 EKLCEYRTYL 145


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1  EKLIEYKTYL 10
          EKLIE KTYL
Sbjct: 50 EKLIEVKTYL 59


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 46 EKLIEHKTYL 55


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  EKLIEYKTYL 10
          EKLIE KTYL
Sbjct: 56 EKLIEQKTYL 65


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1  EKLIEYKTYL 10
          EKLIE KTYL
Sbjct: 56 EKLIEQKTYL 65


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  EKLIEYKTYL 10
          EKLIE KTYL
Sbjct: 50 EKLIEQKTYL 59


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1  EKLIEYKTYL 10
          EKLIE KTYL
Sbjct: 55 EKLIEQKTYL 64


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1  EKLIEYKTYL 10
          EKLIE KTYL
Sbjct: 56 EKLIEQKTYL 65


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain

Query: 1  EKLIEYKTYL 10
          EKLIE KTYL
Sbjct: 52 EKLIEQKTYL 61


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC

Query: 1  EKLIEYKTYL 10
          EKLIE KTYL
Sbjct: 59 EKLIEQKTYL 68


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1  EKLIEYKTYL 10
          EKLIE KTYL
Sbjct: 56 EKLIEQKTYL 65


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 49 EKLIEHKTYL 58


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 49 EKLIEHKTYL 58


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1  EKLIEYKTYL 10
          EKLIEYK YL
Sbjct: 56 EKLIEYKNYL 65


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 49 EKLIEHKTYL 58


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 49 EKLIEHKTYL 58


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 49 EKLIEHKTYL 58


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1  EKLIEYKTYL 10
          EKLIEYK YL
Sbjct: 54 EKLIEYKNYL 63


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 47 EKLIEHKTYL 56


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 49 EKLIEHKTYL 58


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 48 EKLIEHKTYL 57


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 47 EKLIEHKTYL 56


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 49 EKLIEHKTYL 58


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 49 EKLIEHKTYL 58


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 49 EKLIEHKTYL 58


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 48 EKLIEHKTYL 57


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1  EKLIEYKTYL 10
          EKL+E+KTYL
Sbjct: 56 EKLLEHKTYL 65


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1  EKLIEYKTYL 10
          EKLIE+KTYL
Sbjct: 48 EKLIEHKTYL 57




26|Sequence|126|135|YKTYLQALPY

>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana

Query: 1  YKTYLQALPY 10
          YKTYLQALPY
Sbjct: 57 YKTYLQALPY 66


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis

Query: 1  YKTYLQALPY 10
          YKTYLQALPY
Sbjct: 57 YKTYLQALPY 66


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1  YKTYLQALPY 10
          YKTYLQALPY
Sbjct: 68 YKTYLQALPY 77


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM

Query: 1  YKTYLQALPY 10
          YKTYLQALPY
Sbjct: 67 YKTYLQALPY 76


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   YKTYLQALPY 10
           YKTYLQALPY
Sbjct: 126 YKTYLQALPY 135


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1  YKTYLQALPY 10
          YKTYLQALPY
Sbjct: 56 YKTYLQALPY 65


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1  YKTYLQALPY 10
          YKTYLQALPY
Sbjct: 56 YKTYLQALPY 65


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1  YKTYLQALPY 10
          YKTYLQALPY
Sbjct: 61 YKTYLQALPY 70


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   YKTYLQALPY 10
           YKTYLQALPY
Sbjct: 126 YKTYLQALPY 135


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain

Query: 1  YKTYLQALPY 10
          YKTYLQALPY
Sbjct: 56 YKTYLQALPY 65


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1  YKTYLQALPY 10
          YKTYLQALPY
Sbjct: 56 YKTYLQALPY 65


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1  YKTYLQALPY 10
          YKTYLQALPY
Sbjct: 55 YKTYLQALPY 64


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1  YKTYLQALPY 10
          YKTYLQA+PY
Sbjct: 55 YKTYLQAIPY 64


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   YKTYLQALPY 10
           YKTYLQALPY
Sbjct: 126 YKTYLQALPY 135


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   YKTYLQALPY 10
           YKTYLQALPY
Sbjct: 126 YKTYLQALPY 135


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   YKTYLQALPY 10
           YKTYLQALPY
Sbjct: 126 YKTYLQALPY 135


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1  YKTYLQALPY 10
          Y+TYLQALPY
Sbjct: 55 YRTYLQALPY 64


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   YKTYLQALPY 10
           YKTYLQALPY
Sbjct: 126 YKTYLQALPY 135


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   YKTYLQALPY 10
           YKTYLQALPY
Sbjct: 126 YKTYLQALPY 135


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1  YKTYLQALPY 10
          YKTYLQALPY
Sbjct: 58 YKTYLQALPY 67


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1  YKTYLQALPY 10
          YK+YLQALPY
Sbjct: 63 YKSYLQALPY 72


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1  YKTYLQALPY 10
          +KTYLQALPY
Sbjct: 65 HKTYLQALPY 74


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   YKTYLQALPY 10
           Y+TYLQALPY
Sbjct: 141 YRTYLQALPY 150


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1  YKTYLQALPY 10
          YKTYLQA PY
Sbjct: 55 YKTYLQATPY 64


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC

Query: 1  YKTYLQALPY 10
          YKTY+QALPY
Sbjct: 59 YKTYIQALPY 68


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain

Query: 1  YKTYLQALPY 10
          +KTYLQALPY
Sbjct: 65 HKTYLQALPY 74


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1  YKTYLQALPY 10
          +KTYLQALPY
Sbjct: 55 HKTYLQALPY 64


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1  YKTYLQALPY 10
          YKTYLQA+PY
Sbjct: 59 YKTYLQAIPY 68


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1  YKTYLQALPY 10
          YKTYLQA+PY
Sbjct: 59 YKTYLQAIPY 68


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1  YKTYLQALPY 10
          YKTYLQ +PY
Sbjct: 52 YKTYLQGMPY 61


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1  YKTYLQALPY 10
          YKTY+QALPY
Sbjct: 64 YKTYIQALPY 73


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1  YKTYLQALPY 10
          YK+YLQA+PY
Sbjct: 69 YKSYLQAVPY 78


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 2  KTYLQALPY 10
          KTYLQALPY
Sbjct: 56 KTYLQALPY 64


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  YKTYLQALPY 10
          +KTYLQA+PY
Sbjct: 75 HKTYLQAIPY 84


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1  YKTYLQALPY 10
          YK YLQALPY
Sbjct: 59 YKNYLQALPY 68


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1  YKTYLQALPY 10
          YK YLQALPY
Sbjct: 61 YKNYLQALPY 70


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1  YKTYLQALPY 10
          YKTY QALPY
Sbjct: 61 YKTYTQALPY 70


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain

Query: 1  YKTYLQALPY 10
          YKTYLQA PY
Sbjct: 55 YKTYLQATPY 64


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1  YKTYLQALPY 10
          +KTYLQALPY
Sbjct: 53 HKTYLQALPY 62


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B

Query: 2  KTYLQALPY 10
          KTYLQALPY
Sbjct: 55 KTYLQALPY 63


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 2  KTYLQALPY 10
          KTYLQALPY
Sbjct: 55 KTYLQALPY 63


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC

Query: 2  KTYLQALPY 10
          KTYLQALPY
Sbjct: 55 KTYLQALPY 63


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1  YKTYLQALPY 10
          +KTYLQALPY
Sbjct: 53 HKTYLQALPY 62


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 2  KTYLQALPY 10
          KTYLQALPY
Sbjct: 55 KTYLQALPY 63


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 2  KTYLQALPY 10
          KTYLQALPY
Sbjct: 55 KTYLQALPY 63


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1  YKTYLQALPY 10
          +KTYLQALPY
Sbjct: 53 HKTYLQALPY 62


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 61 KTYLQAIPY 69


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C

Query: 2  KTYLQALPY 10
          KTYLQALPY
Sbjct: 55 KTYLQALPY 63


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 65 KTYLQAIPY 73


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 58 KTYLQAIPY 66


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1  YKTYLQALPY 10
          +KTYLQALPY
Sbjct: 51 HKTYLQALPY 60


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAIPY 64


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 62 KTYLQAIPY 70


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAIPY 64


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAIPY 64


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 58 KTYLQAMPY 66


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1  YKTYLQALPY 10
          +KTYLQA+PY
Sbjct: 52 HKTYLQAIPY 61


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 58 KTYLQAMPY 66


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 62 KTYLQAIPY 70


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 62 KTYLQAIPY 70


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC

Query: 1  YKTYLQALPY 10
          +KTYLQA PY
Sbjct: 55 HKTYLQATPY 64


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 62 KTYLQAIPY 70


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1  YKTYLQALPY 10
          +KTYLQA+PY
Sbjct: 52 HKTYLQAIPY 61


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1  YKTYLQALPY 10
          +KTYLQA+PY
Sbjct: 54 HKTYLQAIPY 63


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1  YKTYLQALPY 10
          +KTYLQA PY
Sbjct: 55 HKTYLQATPY 64


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAIPY 64


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1  YKTYLQALPY 10
          +KTYLQA+PY
Sbjct: 54 HKTYLQAIPY 63


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1  YKTYLQALPY 10
          +KTYLQA+PY
Sbjct: 54 HKTYLQAIPY 63


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1  YKTYLQALPY 10
          +KTYLQA+PY
Sbjct: 54 HKTYLQAIPY 63


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1  YKTYLQALPY 10
          +KTYLQA+PY
Sbjct: 54 HKTYLQAIPY 63


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1  YKTYLQALPY 10
          +KTYLQA+PY
Sbjct: 54 HKTYLQAIPY 63


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1  YKTYLQALPY 10
          +KTY+QALPY
Sbjct: 53 HKTYIQALPY 62


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1  YKTYLQALPY 10
          +KTYLQA+PY
Sbjct: 54 HKTYLQAIPY 63


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1  YKTYLQALPY 10
          +KTYLQA+PY
Sbjct: 54 HKTYLQAIPY 63


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1  YKTYLQALPY 10
          +KTYLQA+PY
Sbjct: 54 HKTYLQAIPY 63


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 64 KTYLQAVPY 72


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   YKTYLQALPY 10
           +KTY QALPY
Sbjct: 145 HKTYTQALPY 154


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 64 KTYLQAVPY 72


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 2  KTYLQALPY 10
          KTY QALPY
Sbjct: 62 KTYFQALPY 70


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 2  KTYLQALPY 10
          KTY+QALPY
Sbjct: 54 KTYIQALPY 62


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 2  KTYLQALPY 10
          KTYLQA+PY
Sbjct: 56 KTYLQAVPY 64


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1  YKTYLQALPY 10
          +KT+LQALPY
Sbjct: 53 HKTFLQALPY 62


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 2  KTYLQALPY 10
          KTYLQA PY
Sbjct: 56 KTYLQATPY 64


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1  YKTYLQALPY 10
          +KTY+Q+LPY
Sbjct: 53 HKTYIQSLPY 62


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1  YKTYLQALPY 10
          +KTYLQA PY
Sbjct: 55 HKTYLQATPY 64


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1  YKTYLQALPY 10
          YKTY+Q++PY
Sbjct: 53 YKTYIQSVPY 62


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 2  KTYLQALPY 10
          KTY+QA+PY
Sbjct: 55 KTYMQAVPY 63


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1  YKTYLQALPY 10
          YKTY +ALPY
Sbjct: 79 YKTYPKALPY 88


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain

Query: 1  YKTYLQALPY 10
          +KTY+Q+LPY
Sbjct: 53 HKTYIQSLPY 62


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 2  KTYLQALPY 10
          KTY QALPY
Sbjct: 64 KTYTQALPY 72


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 2  KTYLQALPY 10
          KTY QALPY
Sbjct: 64 KTYTQALPY 72


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1  YKTYLQALPY 10
          +KT++QALPY
Sbjct: 53 HKTFIQALPY 62


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1  YKTYLQALPY 10
          +KT++QALPY
Sbjct: 53 HKTFIQALPY 62


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1  YKTYLQALPY 10
          +KT++QALPY
Sbjct: 53 HKTFIQALPY 62


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1  YKTYLQALPY 10
          +KT++QALPY
Sbjct: 53 HKTFIQALPY 62


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 2  KTYLQALPY 10
          KTY+Q+LPY
Sbjct: 54 KTYIQSLPY 62


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 2  KTYLQALPY 10
          KTY+Q+LPY
Sbjct: 54 KTYIQSLPY 62


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain

Query: 2  KTYLQALPY 10
          KTY+Q+LPY
Sbjct: 54 KTYIQSLPY 62




27|Sequence|131|140|QALPYFDRLD

>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 69 QALPYFDRLD 78


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 66 QALPYFDRLD 75


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   QALPYFDRLD 10
           QALPYFDRLD
Sbjct: 150 QALPYFDRLD 159


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 66 QALPYFDRLD 75


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 64 QALPYFDRLD 73


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 66 QALPYFDRLD 75


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 66 QALPYFDRLD 75


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 68 QALPYFDRLD 77


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 68 QALPYFDRLD 77


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   QALPYFDRLD 10
           QALPYFDRLD
Sbjct: 131 QALPYFDRLD 140


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 72 QALPYFDRLD 81


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 68 QALPYFDRLD 77


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   QALPYFDRLD 10
           QALPYFDRLD
Sbjct: 131 QALPYFDRLD 140


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 70 QALPYFDRLD 79


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 61 QALPYFDRLD 70


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 61 QALPYFDRLD 70


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 64 QALPYFDRLD 73


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 70 QALPYFDRLD 79


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 73 QALPYFDRLD 82


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 61 QALPYFDRLD 70


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 61 QALPYFDRLD 70


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 59 QAIPYFDRLD 68


>sp|NDUS2_PARTE|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Paramecium tetraurelia

Query: 1  QALPYFDRLD 10
          Q++PYFDRLD
Sbjct: 55 QSMPYFDRLD 64


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 56 QALPYFDRLD 65


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 57 QAIPYFDRLD 66


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 57 QAIPYFDRLD 66


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 62 QALPYFDRLD 71


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 60 QALPYFDRLD 69


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 58 QALPYFDRLD 67


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 60 QAVPYFDRLD 69


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   QALPYFDRLD 10
           QALPYFDRLD
Sbjct: 131 QALPYFDRLD 140


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 60 QALPYFDRLD 69


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   QALPYFDRLD 10
           QALPYFDRLD
Sbjct: 146 QALPYFDRLD 155


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 59 QAIPYFDRLD 68


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 62 QAIPYFDRLD 71


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 66 QALPYFDRLD 75


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 60 QALPYFDRLD 69


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   QALPYFDRLD 10
           QALPYFDRLD
Sbjct: 131 QALPYFDRLD 140


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 58 QALPYFDRLD 67


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   QALPYFDRLD 10
           QALPYFDRLD
Sbjct: 131 QALPYFDRLD 140


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   QALPYFDRLD 10
           QALPYFDRLD
Sbjct: 131 QALPYFDRLD 140


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   QALPYFDRLD 10
           QALPYFDRLD
Sbjct: 131 QALPYFDRLD 140


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 58 QALPYFDRLD 67


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 64 QAIPYFDRLD 73


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 59 QAIPYFDRLD 68


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 59 QAIPYFDRLD 68


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 74 QAVPYFDRLD 83


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 59 QAIPYFDRLD 68


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 59 QAIPYFDRLD 68


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 64 QAIPYFDRLD 73


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1  QALPYFDRLD 10
          QALPYFDRLD
Sbjct: 63 QALPYFDRLD 72


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 59 QAIPYFDRLD 68


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 59 QAVPYFDRLD 68


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 59 QAIPYFDRLD 68


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 59 QAIPYFDRLD 68


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 60 QAVPYFDRLD 69


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 68 QAVPYFDRLD 77


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 62 QAMPYFDRLD 71


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 62 QAMPYFDRLD 71


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 65 QAIPYFDRLD 74


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 60 QAIPYFDRLD 69


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 69 QAIPYFDRLD 78


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 60 QAIPYFDRLD 69


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 60 QAIPYFDRLD 69


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 80 QAIPYFDRLD 89


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 66 QAIPYFDRLD 75


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 66 QAIPYFDRLD 75


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 60 QAIPYFDRLD 69


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 66 QAIPYFDRLD 75


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 60 QAIPYFDRLD 69


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 66 QAIPYFDRLD 75


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1  QALPYFDRLD 10
          +ALPYFDRLD
Sbjct: 84 KALPYFDRLD 93


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 60 QAVPYFDRLD 69


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 60 QAVPYFDRLD 69


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 68 QAVPYFDRLD 77


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1  QALPYFDRLD 10
          QA+PYFDRLD
Sbjct: 60 QAVPYFDRLD 69


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1  QALPYFDRLD 10
          QA PYFDRLD
Sbjct: 60 QATPYFDRLD 69


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC

Query: 1  QALPYFDRLD 10
          QA PYFDRLD
Sbjct: 60 QATPYFDRLD 69


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1  QALPYFDRLD 10
          QALPY DRLD
Sbjct: 59 QALPYMDRLD 68


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1  QALPYFDRLD 10
          QA PYFDRLD
Sbjct: 60 QATPYFDRLD 69


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C

Query: 1  QALPYFDRLD 10
          QALPY DRLD
Sbjct: 59 QALPYMDRLD 68


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B

Query: 1  QALPYFDRLD 10
          QALPY DRLD
Sbjct: 59 QALPYMDRLD 68


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1  QALPYFDRLD 10
          QALPY DRLD
Sbjct: 59 QALPYMDRLD 68


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC

Query: 1  QALPYFDRLD 10
          QALPY DRLD
Sbjct: 59 QALPYMDRLD 68


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1  QALPYFDRLD 10
          QALPY DRLD
Sbjct: 59 QALPYMDRLD 68


>sp|NDUS2_TRYBB|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Trypanosoma brucei brucei

Query: 1  QALPYFDRLD 10
          Q LPYFDRLD
Sbjct: 62 QCLPYFDRLD 71


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1  QALPYFDRLD 10
          QALPY DRLD
Sbjct: 58 QALPYMDRLD 67


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1  QALPYFDRLD 10
          Q +PYFDRLD
Sbjct: 77 QTIPYFDRLD 86


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1  QALPYFDRLD 10
          QA PYFDRLD
Sbjct: 60 QATPYFDRLD 69


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain

Query: 1  QALPYFDRLD 10
          QA PYFDRLD
Sbjct: 60 QATPYFDRLD 69


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1  QALPYFDRLD 10
          QA PYFDRLD
Sbjct: 60 QATPYFDRLD 69


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1  QALPYFDRLD 10
          Q +PYFDRLD
Sbjct: 57 QGMPYFDRLD 66


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1  QALPYFDRLD 10
          QALPY DRLD
Sbjct: 58 QALPYMDRLD 67


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC

Query: 1  QALPYFDRLD 10
          Q +PYFDRLD
Sbjct: 64 QNIPYFDRLD 73


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1  QALPYFDRLD 10
          Q LPYFDRLD
Sbjct: 72 QNLPYFDRLD 81


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1  QALPYFDRLD 10
          Q LPYFDRLD
Sbjct: 71 QNLPYFDRLD 80


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1  QALPYFDRLD 10
          Q LPYFDRLD
Sbjct: 72 QNLPYFDRLD 81


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1  QALPYFDRLD 10
          Q LPYFDRLD
Sbjct: 79 QNLPYFDRLD 88


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1  QALPYFDRLD 10
          QALPY DRLD
Sbjct: 58 QALPYMDRLD 67


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1  QALPYFDRLD 10
          QALPY DRLD
Sbjct: 60 QALPYLDRLD 69


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1  QALPYFDRLD 10
          QALPY DRLD
Sbjct: 58 QALPYMDRLD 67


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  QALPYFDRLD 10
          Q LPYFDRLD
Sbjct: 69 QNLPYFDRLD 78


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1  QALPYFDRLD 10
          QALPY DRLD
Sbjct: 58 QALPYMDRLD 67


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1  QALPYFDRLD 10
          QALPY DRLD
Sbjct: 58 QALPYMDRLD 67


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040)

Query: 1  QALPYFDRLD 10
          Q LPYFDRLD
Sbjct: 70 QNLPYFDRLD 79


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  QALPYFDRLD 10
          Q LPYFDRLD
Sbjct: 71 QNLPYFDRLD 80


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC

Query: 1  QALPYFDRLD 10
          Q LPYFDRLD
Sbjct: 69 QNLPYFDRLD 78


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1  QALPYFDRLD 10
          QALPY DRLD
Sbjct: 58 QALPYMDRLD 67


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1  QALPYFDRLD 10
          Q +PYFDRLD
Sbjct: 82 QNIPYFDRLD 91


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus

Query: 1  QALPYFDRL 9
          QALPYFDRL
Sbjct: 4  QALPYFDRL 12


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 1  QALPYFDRLD 10
          Q +PYFDRLD
Sbjct: 60 QNVPYFDRLD 69


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 1  QALPYFDRLD 10
          QA+PY DRLD
Sbjct: 60 QAVPYLDRLD 69


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain

Query: 1  QALPYFDRLD 10
          Q+LPY DRLD
Sbjct: 58 QSLPYMDRLD 67


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1  QALPYFDRLD 10
          Q+LPY DRLD
Sbjct: 58 QSLPYMDRLD 67


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1  QALPYFDRLD 10
          Q+LPY DRLD
Sbjct: 58 QSLPYMDRLD 67


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1  QALPYFDRLD 10
          Q+LPY DRLD
Sbjct: 58 QSLPYMDRLD 67


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1  QALPYFDRLD 10
          Q+LPY DRLD
Sbjct: 58 QSLPYMDRLD 67


>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC

Query: 1  QALPYFDRLD 10
          Q  PYFDRLD
Sbjct: 65 QGTPYFDRLD 74


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG

Query: 1  QALPYFDRLD 10
          QA+PY DRLD
Sbjct: 60 QAVPYLDRLD 69


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1  QALPYFDRLD 10
          QA+PY DRLD
Sbjct: 60 QAVPYLDRLD 69


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1  QALPYFDRLD 10
          QA+PY DRLD
Sbjct: 60 QAVPYLDRLD 69


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1  QALPYFDRLD 10
          QA+PY DRLD
Sbjct: 60 QAVPYLDRLD 69


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1  QALPYFDRLD 10
          QA+PY DRLD
Sbjct: 60 QAVPYLDRLD 69


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1  QALPYFDRLD 10
          QA+PY DRLD
Sbjct: 60 QAVPYLDRLD 69


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1  QALPYFDRLD 10
          QA+PY DRLD
Sbjct: 60 QAVPYLDRLD 69


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1  QALPYFDRLD 10
          QA+PY DRLD
Sbjct: 60 QAVPYLDRLD 69


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1  QALPYFDRLD 10
          QA+PY DRLD
Sbjct: 60 QAVPYLDRLD 69


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1  QALPYFDRLD 10
          Q+LPY DRLD
Sbjct: 58 QSLPYMDRLD 67


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain

Query: 1  QALPYFDRLD 10
          Q+LPY DRLD
Sbjct: 58 QSLPYMDRLD 67


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1  QALPYFDRLD 10
          Q+LPY DRLD
Sbjct: 58 QSLPYMDRLD 67


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1  QALPYFDRLD 10
          Q  PYFDRLD
Sbjct: 78 QNTPYFDRLD 87


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1  QALPYFDRLD 10
          Q+LPY DRLD
Sbjct: 58 QSLPYMDRLD 67




28|Sequence|136|145|FDRLDYVSMM

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   FDRLDYVSMM 10
           FDRLDYVSMM
Sbjct: 136 FDRLDYVSMM 145


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   FDRLDYVSMM 10
           FDRLDYVSMM
Sbjct: 136 FDRLDYVSMM 145


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   FDRLDYVSMM 10
           FDRLDYVSMM
Sbjct: 136 FDRLDYVSMM 145


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   FDRLDYVSMM 10
           FDRLDYVSMM
Sbjct: 136 FDRLDYVSMM 145


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   FDRLDYVSMM 10
           FDRLDYVSMM
Sbjct: 136 FDRLDYVSMM 145


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   FDRLDYVSMM 10
           FDRLDYVSMM
Sbjct: 136 FDRLDYVSMM 145


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   FDRLDYVSMM 10
           FDRLDYVSMM
Sbjct: 136 FDRLDYVSMM 145


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   FDRLDYVSMM 10
           FDRLDYVSMM
Sbjct: 155 FDRLDYVSMM 164


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1  FDRLDYVSMM 10
          FDRLDYVSMM
Sbjct: 71 FDRLDYVSMM 80


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1  FDRLDYVSMM 10
          FDRLDYVSMM
Sbjct: 74 FDRLDYVSMM 83


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   FDRLDYVSMM 10
           FDRLDYVSMM
Sbjct: 151 FDRLDYVSMM 160


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1  FDRLDYVSMM 10
          FDRLDYVSMM
Sbjct: 71 FDRLDYVSMM 80


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1  FDRLDYVSMM 10
          FDRLDYVSMM
Sbjct: 71 FDRLDYVSMM 80


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1  FDRLDYVSMM 10
          FDRLDYVSMM
Sbjct: 69 FDRLDYVSMM 78


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1  FDRLDYVSMM 10
          FDRLDYVSMM
Sbjct: 71 FDRLDYVSMM 80


>sp|NDUS2_PARTE|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Paramecium tetraurelia

Query: 1  FDRLDYVSMM 10
          FDRLDYVSMM
Sbjct: 60 FDRLDYVSMM 69


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis

Query: 1  FDRLDYVSMM 10
          FDRLDYVSMM
Sbjct: 67 FDRLDYVSMM 76


>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC

Query: 1  FDRLDYVSMM 10
          FDRLDY+SMM
Sbjct: 70 FDRLDYMSMM 79


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 89 FDRLDYVSPM 98


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 73 FDRLDYVSPM 82


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 79 FDRLDYVSPM 88


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 82 DRLDYVSMM 90


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 83 DRLDYVSMM 91


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 64 FDRLDYVSPM 73


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 82 DRLDYVSMM 90


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 82 DRLDYVSMM 90


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 82 DRLDYVSMM 90


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 69 FDRLDYVSPM 78


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 69 FDRLDYVSPM 78


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 65 FDRLDYVSPM 74


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 62 FDRLDYVSPM 71


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1  FDRLDYVSM 9
          FDRLDYVSM
Sbjct: 73 FDRLDYVSM 81


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1  FDRLDYVSM 9
          FDRLDYVSM
Sbjct: 73 FDRLDYVSM 81


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 65 FDRLDYVSPM 74


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 65 DRLDYVSMM 73


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 65 DRLDYVSMM 73


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 65 DRLDYVSMM 73


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 62 FDRLDYVSPM 71


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 64 FDRLDYVSPM 73


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 65 DRLDYVSMM 73


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 65 DRLDYVSMM 73


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 65 DRLDYVSMM 73


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 63 FDRLDYVSPM 72


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 64 FDRLDYVSPM 73


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 64 FDRLDYVSPM 73


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 64 FDRLDYVSPM 73


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 64 FDRLDYVSPM 73


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 63 FDRLDYVSPM 72


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 71 FDRLDYVSPM 80


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 64 FDRLDYVSPM 73


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 64 FDRLDYVSPM 73


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 68 FDRLDYVSPM 77


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 64 FDRLDYVSPM 73


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 63 FDRLDYVSPM 72


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 69 FDRLDYVSPM 78


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 66 FDRLDYVSPM 75


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 66 FDRLDYVSPM 75


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp.

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 82 DRLDYVSMM 90


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 61 FDRLDYVSPM 70


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 66 FDRLDYVSPM 75


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 82 DRLDYVSMM 90


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv.

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 82 DRLDYVSMM 90


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 82 DRLDYVSMM 90


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 82 DRLDYVSMM 90


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 82 DRLDYVSMM 90


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 82 DRLDYVSMM 90


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 82 DRLDYVSMM 90


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 82 DRLDYVSMM 90


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 82 DRLDYVSMM 90


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp.

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1  FDRLDYVSMM 10
          FDRLDYVS M
Sbjct: 66 FDRLDYVSPM 75


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 2  DRLDYVSMM 10
          DRLDYVSMM
Sbjct: 64 DRLDYVSMM 72


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 2  DRLDYVSMM 10
          DRLDY+SMM
Sbjct: 64 DRLDYMSMM 72




29|Sequence|141|150|YVSMMCNEQA

>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1  YVSMMCNEQA 10
          YVSMMCNEQA
Sbjct: 68 YVSMMCNEQA 77


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   YVSMMCNEQA 10
           YVSMMCNEQA
Sbjct: 141 YVSMMCNEQA 150


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   YVSMMCNEQA 10
           YVSMMCNEQA
Sbjct: 141 YVSMMCNEQA 150


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   YVSMMCNEQA 10
           YVSMMCNEQA
Sbjct: 141 YVSMMCNEQA 150


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   YVSMMCNEQA 10
           YVSMMCNEQA
Sbjct: 141 YVSMMCNEQA 150


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   YVSMMCNEQA 10
           YVSMMCNEQA
Sbjct: 141 YVSMMCNEQA 150


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   YVSMMCNEQA 10
           YVSMMCNEQA
Sbjct: 141 YVSMMCNEQA 150


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   YVSMMCNEQA 10
           YVSMMCNEQA
Sbjct: 160 YVSMMCNEQA 169


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   YVSMMCNEQA 10
           YVSMMCNEQA
Sbjct: 141 YVSMMCNEQA 150


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp.

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp.

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 86 YVSMMCNEHA 95


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 86 YVSMMCNEHA 95


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 86 YVSMMCNEHA 95


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 86 YVSMMCNEHA 95


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv.

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 86 YVSMMCNEHA 95


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 86 YVSMMCNEHA 95


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 87 YVSMMCNEHA 96


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 86 YVSMMCNEHA 95


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 68 YVSMMCNEHA 77


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 86 YVSMMCNEHA 95


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 86 YVSMMCNEHA 95


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 86 YVSMMCNEHA 95


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 86 YVSMMCNEHA 95


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 86 YVSMMCNEHA 95


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 86 YVSMMCNEHA 95


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1  YVSMMCNEQA 10
          YVSMMCNE A
Sbjct: 86 YVSMMCNEHA 95


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1  YVSMMCNEQA 10
          Y+SMMCNE A
Sbjct: 68 YMSMMCNESA 77


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1  YVSMMCNEQA 10
          YVSM+CNE A
Sbjct: 68 YVSMLCNEHA 77


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1  YVSMMCNEQA 10
          YVSMMCNE  
Sbjct: 68 YVSMMCNEHG 77


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1  YVSMMCNEQA 10
          YVSMMCNE  
Sbjct: 68 YVSMMCNEHG 77


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1  YVSMMCNEQA 10
          YVSM+CNE A
Sbjct: 68 YVSMLCNEHA 77


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1  YVSMMCNEQA 10
          YVSMM NEQA
Sbjct: 69 YVSMMVNEQA 78


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B

Query: 1  YVSMMCNEQA 10
          YVSMM NEQA
Sbjct: 69 YVSMMVNEQA 78


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1  YVSMMCNEQA 10
          YVSMM NEQA
Sbjct: 69 YVSMMVNEQA 78


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C

Query: 1  YVSMMCNEQA 10
          YVSMM NEQA
Sbjct: 69 YVSMMVNEQA 78


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1  YVSMMCNEQA 10
          YVSMM NEQA
Sbjct: 69 YVSMMVNEQA 78


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC

Query: 1  YVSMMCNEQA 10
          YVSMM NEQA
Sbjct: 69 YVSMMVNEQA 78


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1  YVSMMCNEQA 10
          YVSMM NEQA
Sbjct: 68 YVSMMSNEQA 77


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1  YVSMMCNEQA 10
          YVSMMC E A
Sbjct: 76 YVSMMCQEHA 85


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1  YVSMMCNEQA 10
          YVSMMC E A
Sbjct: 76 YVSMMCQEHA 85




30|Sequence|146|155|CNEQAYSLAV

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   CNEQAYSLAV 10
           CNEQAYSLAV
Sbjct: 146 CNEQAYSLAV 155


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   CNEQAYSLAV 10
           CNEQAYSLAV
Sbjct: 146 CNEQAYSLAV 155


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   CNEQAYSLAV 10
           CNEQAYSLAV
Sbjct: 146 CNEQAYSLAV 155


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   CNEQAYSLAV 10
           CNEQAYSLAV
Sbjct: 146 CNEQAYSLAV 155


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   CNEQAYSLAV 10
           CNEQAYSLAV
Sbjct: 146 CNEQAYSLAV 155


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   CNEQAYSLAV 10
           CNEQAYSLAV
Sbjct: 146 CNEQAYSLAV 155


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   CNEQAYSLAV 10
           CNEQAYS+AV
Sbjct: 146 CNEQAYSIAV 155


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   CNEQAYSLAV 10
           CNEQA+SLAV
Sbjct: 165 CNEQAWSLAV 174


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1  CNEQAYSLAV 10
          CNEQAY LA+
Sbjct: 73 CNEQAYCLAI 82




31|Sequence|151|160|YSLAVEKLLN

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   YSLAVEKLLN 10
           YSLAVEKLLN
Sbjct: 151 YSLAVEKLLN 160


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   YSLAVEKLLN 10
           YSLAVEKLLN
Sbjct: 151 YSLAVEKLLN 160


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   YSLAVEKLLN 10
           YSLAVEKLLN
Sbjct: 151 YSLAVEKLLN 160


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   YSLAVEKLLN 10
           YSLAVEKLLN
Sbjct: 151 YSLAVEKLLN 160


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   YSLAVEKLLN 10
           YSLAVEKLLN
Sbjct: 151 YSLAVEKLLN 160


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   YSLAVEKLLN 10
           YSLAVEKLLN
Sbjct: 151 YSLAVEKLLN 160


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis

Query: 1  YSLAVEKLLN 10
          YSLAVEKLLN
Sbjct: 82 YSLAVEKLLN 91


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1  YSLAVEKLLN 10
          YSLAVEKLLN
Sbjct: 86 YSLAVEKLLN 95


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   YSLAVEKLLN 10
           YS+AVEKLLN
Sbjct: 151 YSIAVEKLLN 160


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1  YSLAVEKLLN 10
          YSLA+EKLLN
Sbjct: 89 YSLAIEKLLN 98




32|Sequence|156|165|EKLLNIRPPP

>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   EKLLNIRPPP 10
           EKLLNIRPPP
Sbjct: 156 EKLLNIRPPP 165


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   EKLLNIRPPP 10
           EKLLNIRPPP
Sbjct: 156 EKLLNIRPPP 165


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   EKLLNIRPPP 10
           EKLLNIRPPP
Sbjct: 156 EKLLNIRPPP 165


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   EKLLNIRPPP 10
           EKLLNIRPPP
Sbjct: 156 EKLLNIRPPP 165


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   EKLLNIRPPP 10
           EKLLNI+PPP
Sbjct: 156 EKLLNIQPPP 165


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   EKLLNIRPPP 10
           EKLLNI+PPP
Sbjct: 156 EKLLNIQPPP 165


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   EKLLNIRPPP 10
           EKLLNI+PPP
Sbjct: 156 EKLLNIQPPP 165




33|Sequence|161|170|IRPPPRAQWI

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   IRPPPRAQWI 10
           IRPPPRAQWI
Sbjct: 161 IRPPPRAQWI 170


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   IRPPPRAQWI 10
           IRPPPRAQWI
Sbjct: 161 IRPPPRAQWI 170


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   IRPPPRAQWI 10
           IRPPPRAQWI
Sbjct: 161 IRPPPRAQWI 170


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   IRPPPRAQWI 10
           IRPPPRAQWI
Sbjct: 161 IRPPPRAQWI 170


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   IRPPPRAQWI 10
           I+PPPRAQWI
Sbjct: 161 IQPPPRAQWI 170


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   IRPPPRAQWI 10
           I+PPPRAQWI
Sbjct: 161 IQPPPRAQWI 170


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   IRPPPRAQWI 10
           I+PPPRAQWI
Sbjct: 161 IQPPPRAQWI 170




34|Sequence|166|175|RAQWIRVLFG

>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   RAQWIRVLFG 10
           RAQWIRVLFG
Sbjct: 166 RAQWIRVLFG 175


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   RAQWIRVLFG 10
           RAQWIRVLFG
Sbjct: 166 RAQWIRVLFG 175


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   RAQWIRVLFG 10
           RAQWIRVLFG
Sbjct: 166 RAQWIRVLFG 175


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   RAQWIRVLFG 10
           RAQWIRVLFG
Sbjct: 166 RAQWIRVLFG 175


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   RAQWIRVLFG 10
           RAQWIRVLFG
Sbjct: 166 RAQWIRVLFG 175


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   RAQWIRVLFG 10
           RAQWIRVLFG
Sbjct: 166 RAQWIRVLFG 175


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   RAQWIRVLFG 10
           RAQWIRVLFG
Sbjct: 166 RAQWIRVLFG 175


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1   RAQWIRVLFG 10
           RAQWIRVLF 
Sbjct: 109 RAQWIRVLFA 118


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   RAQWIRVLF 9
           RAQWIRVLF
Sbjct: 101 RAQWIRVLF 109




35|Sequence|171|180|RVLFGEITRL

>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   RVLFGEITRL 10
           RVLFGEITRL
Sbjct: 171 RVLFGEITRL 180


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   RVLFGEITRL 10
           RVLFGEITRL
Sbjct: 171 RVLFGEITRL 180


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   RVLFGEITRL 10
           RVLFGEITRL
Sbjct: 171 RVLFGEITRL 180


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   RVLFGEITRL 10
           RVLFGEITRL
Sbjct: 171 RVLFGEITRL 180


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   RVLFGEITRL 10
           RVLFGEITRL
Sbjct: 171 RVLFGEITRL 180


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   RVLFGEITRL 10
           RVLFGEITR+
Sbjct: 171 RVLFGEITRI 180


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   RVLFGEITRL 10
           RVLFGEITR+
Sbjct: 171 RVLFGEITRI 180




36|Sequence|176|185|EITRLLNHIM

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   EITRLLNHIM 10
           EITRLLNHIM
Sbjct: 176 EITRLLNHIM 185


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   EITRLLNHIM 10
           EITRLLNHIM
Sbjct: 176 EITRLLNHIM 185


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   EITRLLNHIM 10
           EITRLLNHIM
Sbjct: 176 EITRLLNHIM 185


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   EITRLLNHIM 10
           EITRLLNHIM
Sbjct: 176 EITRLLNHIM 185


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   EITRLLNHIM 10
           EITRLLNHIM
Sbjct: 176 EITRLLNHIM 185


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   EITRLLNHIM 10
           EITR+LNHIM
Sbjct: 176 EITRILNHIM 185


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   EITRLLNHIM 10
           EITR+LNHIM
Sbjct: 176 EITRILNHIM 185


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1   EITRLLNHIM 10
           EITRLLNH+M
Sbjct: 103 EITRLLNHLM 112


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1   EITRLLNHIM 10
           E+TRL+NHIM
Sbjct: 105 EVTRLINHIM 114


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain EF01-2)

Query: 1   EITRLLNHIM 10
           EITRLLNH+M
Sbjct: 103 EITRLLNHLM 112


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   EITRLLNHIM 10
           EITRLLNH+M
Sbjct: 103 EITRLLNHLM 112


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1   EITRLLNHIM 10
           EITRLLNH+M
Sbjct: 103 EITRLLNHLM 112


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain CJ2)

Query: 1   EITRLLNHIM 10
           EITRLLNH+M
Sbjct: 103 EITRLLNHLM 112


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM 17343

Query: 1   EITRLLNHIM 10
           EITRLLNH+M
Sbjct: 103 EITRLLNHLM 112


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 1   EITRLLNHIM 10
           EITRLLNH+M
Sbjct: 103 EITRLLNHLM 112


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP 134

Query: 1   EITRLLNHIM 10
           EITRLLNH+M
Sbjct: 103 EITRLLNHLM 112


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 121 EITRILNHLM 130


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 121 EITRILNHLM 130


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 121 EITRILNHLM 130


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 121 EITRILNHLM 130


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1   EITRLLNHIM 10
           EITRLLNH+M
Sbjct: 103 EITRLLNHLM 112


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 121 EITRILNHLM 130


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 121 EITRILNHLM 130


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRILNHLM 112


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 109 EITRILNHLM 118


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   EITRLLNHIM 10
           EITR+LNHI+
Sbjct: 129 EITRILNHIL 138


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRILNHLM 112


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRILNHLM 112


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 122 EITRILNHLM 131


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 191 EITRILNHLM 200


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1   EITRLLNHIM 10
           E+TR+LNH+M
Sbjct: 103 EVTRILNHLM 112


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRILNHLM 112


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1   EITRLLNHIM 10
           EITR+LNHIM
Sbjct: 119 EITRVLNHIM 128


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1   EITRLLNHIM 10
           EITR+LNHIM
Sbjct: 119 EITRVLNHIM 128


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRILNHLM 112


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1   EITRLLNHIM 10
           EITRLLNH++
Sbjct: 103 EITRLLNHLL 112


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain K96243)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRILNHLM 112


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRILNHLM 112


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRILNHLM 112


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain LB400)

Query: 1   EITRLLNHIM 10
           EITR+LNH+M
Sbjct: 103 EITRVLNHLM 112


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   EITRLLNHIM 10
           E+TR+LNH+M
Sbjct: 104 EVTRILNHLM 113


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   EITRLLNHIM 10
           E+TR+LNH+M
Sbjct: 104 EVTRILNHLM 113


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1   EITRLLNHIM 10
           EITRLLNH++
Sbjct: 103 EITRLLNHLL 112


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   EITRLLNHIM 10
           E+TR+LNH+M
Sbjct: 104 EVTRILNHLM 113


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   EITRLLNHIM 10
           E+TR+LNH+M
Sbjct: 104 EVTRILNHLM 113


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 113 EITRILNHLL 122


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   EITRLLNHIM 10
           E+TR+LNH+M
Sbjct: 104 EVTRILNHLM 113


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1   EITRLLNHIM 10
           EITR++NH+M
Sbjct: 103 EITRIMNHLM 112


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 109 EITRILNHLL 118


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1   EITRLLNHIM 10
           E+TRLLNH++
Sbjct: 108 ELTRLLNHLL 117


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   EITRLLNHIM 10
           E+TR+LNH+M
Sbjct: 104 EVTRILNHLM 113


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 103 EITRILNHLL 112


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1   EITRLLNHIM 10
           E+TR+LNH+M
Sbjct: 103 EVTRVLNHLM 112


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 101 EITRILNHLL 110


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1   EITRLLNHIM 10
           EITR++NH+M
Sbjct: 103 EITRIMNHLM 112


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain DSM

Query: 1   EITRLLNHIM 10
           E+TR+LNH+M
Sbjct: 103 EVTRVLNHLM 112


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 111 EITRILNHLL 120


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 103 EITRILNHLL 112


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 103 EITRILNHLL 112


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 103 EITRILNHLL 112


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 103 EITRILNHLL 112


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 103 EITRILNHLL 112


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 103 EITRILNHLL 112


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 103 EITRILNHLL 112


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 103 EITRILNHLL 112


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 119 EITRILNHLL 128


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 103 EITRILNHLL 112


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   EITRLLNHIM 10
           EITR+LNH++
Sbjct: 107 EITRILNHLL 116


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   EITRLLNHIM 10
           EITRLLNH++
Sbjct: 103 EITRLLNHLL 112




37|Sequence|181|190|LNHIMAVTTH

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   LNHIMAVTTH 10
           LNHIMAVTTH
Sbjct: 181 LNHIMAVTTH 190


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   LNHIMAVTTH 10
           LNHIMAVTTH
Sbjct: 181 LNHIMAVTTH 190


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   LNHIMAVTTH 10
           LNHIMAVTTH
Sbjct: 181 LNHIMAVTTH 190


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   LNHIMAVTTH 10
           LNHIMAVTTH
Sbjct: 181 LNHIMAVTTH 190


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   LNHIMAVTTH 10
           LNHIMAVTTH
Sbjct: 181 LNHIMAVTTH 190


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   LNHIMAVTTH 10
           LNHIMAVTTH
Sbjct: 181 LNHIMAVTTH 190


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   LNHIMAVTTH 10
           LNHIMAVTTH
Sbjct: 181 LNHIMAVTTH 190


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   LNHIMAVTTH 10
           LNH+MAVTTH
Sbjct: 114 LNHLMAVTTH 123


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   LNHIMAVTTH 10
           LNHI+AVTTH
Sbjct: 119 LNHILAVTTH 128


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1   LNHIMAVTTH 10
           LNHIMA TTH
Sbjct: 124 LNHIMATTTH 133


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1   LNHIMAVTTH 10
           LNHIMA TTH
Sbjct: 124 LNHIMATTTH 133


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 2   NHIMAVTTH 10
           NHIM +TTH
Sbjct: 201 NHIMGITTH 209


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   LNHIMAVTTH 10
           LNH++A+TTH
Sbjct: 112 LNHLLALTTH 121


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   LNHIMAVTTH 10
           LNH++A+TTH
Sbjct: 116 LNHLLALTTH 125




38|Sequence|186|195|AVTTHALDLG

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   AVTTHALDLG 10
           AVTTHALDLG
Sbjct: 186 AVTTHALDLG 195


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   AVTTHALDLG 10
           AVTTHALDLG
Sbjct: 186 AVTTHALDLG 195


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   AVTTHALDLG 10
           AVTTHALDLG
Sbjct: 186 AVTTHALDLG 195


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   AVTTHALDLG 10
           AVTTHALDLG
Sbjct: 186 AVTTHALDLG 195


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   AVTTHALDLG 10
           AVTTHALD+G
Sbjct: 186 AVTTHALDIG 195


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   AVTTHALDLG 10
           AVTTHALD+G
Sbjct: 186 AVTTHALDIG 195


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   AVTTHALDLG 10
           AVTTHALD+G
Sbjct: 186 AVTTHALDIG 195


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   AVTTHALDLG 10
           AVTTHALD+G
Sbjct: 119 AVTTHALDVG 128


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   AVTTHALDLG 10
           AVTTHA+D+G
Sbjct: 124 AVTTHAMDVG 133


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 2   VTTHALDLG 10
           VTTHALD+G
Sbjct: 112 VTTHALDVG 120




39|Sequence|191|200|ALDLGAMTPF

>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   ALDLGAMTPF 10
           ALDLGAMTPF
Sbjct: 191 ALDLGAMTPF 200


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   ALDLGAMTPF 10
           ALDLGAMTPF
Sbjct: 191 ALDLGAMTPF 200


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   ALDLGAMTPF 10
           ALDLGAMTPF
Sbjct: 191 ALDLGAMTPF 200


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   ALDLGAMTPF 10
           ALDLGAMTPF
Sbjct: 191 ALDLGAMTPF 200


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   ALDLGAMTPF 10
           ALD+GAMTPF
Sbjct: 191 ALDIGAMTPF 200


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   ALDLGAMTPF 10
           ALD+GAMTPF
Sbjct: 124 ALDVGAMTPF 133


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   ALDLGAMTPF 10
           ALD+GAMTPF
Sbjct: 191 ALDIGAMTPF 200


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   ALDLGAMTPF 10
           ALD+GAMTPF
Sbjct: 191 ALDIGAMTPF 200


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   ALDLGAMTPF 10
           ALD+GAMTPF
Sbjct: 210 ALDVGAMTPF 219


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   ALDLGAMTPF 10
           A+D+GAMTPF
Sbjct: 126 AMDVGAMTPF 135


>sp|NUOD_CHLTE|NADH-QUINONE oxidoreductase subunit D|Chlorobaculum tepidum (strain ATCC 49652

Query: 1   ALDLGAMTPF 10
           A+DLGA TPF
Sbjct: 144 AIDLGAFTPF 153


>sp|NUOD_CHLP8|NADH-QUINONE oxidoreductase subunit D|Chlorobaculum parvum (strain DSM 263

Query: 1   ALDLGAMTPF 10
           A+DLGA TPF
Sbjct: 144 AIDLGAFTPF 153


>sp|NUOD2_SYMTH|NADH-QUINONE oxidoreductase subunit D 2|Symbiobacterium thermophilum (strain DSM

Query: 1   ALDLGAMTPF 10
           A+DLGA TPF
Sbjct: 122 AMDLGATTPF 131


>sp|NUOD_CHLPB|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeobacteroides (strain BS1)

Query: 1   ALDLGAMTPF 10
           A+DLGA TPF
Sbjct: 144 AIDLGAFTPF 153


>sp|NUOD_CHLPD|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeobacteroides (strain DSM

Query: 1   ALDLGAMTPF 10
           A+DLGA TPF
Sbjct: 144 AIDLGAFTPF 153


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   ALDLGAMTPF 10
           A+D+GA+TPF
Sbjct: 128 AMDVGALTPF 137


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   ALDLGAMTPF 10
           A+D+GA+TPF
Sbjct: 126 AMDVGALTPF 135


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1   ALDLGAMTPF 10
           A+D+GA+TPF
Sbjct: 134 AMDVGALTPF 143


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1   ALDLGAMTPF 10
           A+D+GA+TPF
Sbjct: 134 AMDVGALTPF 143


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   ALDLGAMTPF 10
           A+D+GA+TPF
Sbjct: 129 AMDVGALTPF 138


>sp|NUOD_PROA2|NADH-QUINONE oxidoreductase subunit D|Prosthecochloris aestuarii (strain DSM 271

Query: 1   ALDLGAMTPF 10
           A+DLGA TPF
Sbjct: 144 AIDLGAFTPF 153


>sp|NUOD_CHLPM|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeovibrioides (strain DSM 265

Query: 1   ALDLGAMTPF 10
           A+DLGA TPF
Sbjct: 144 AIDLGAFTPF 153


>sp|NUOD_CHLL3|NADH-QUINONE oxidoreductase subunit D|Chlorobium luteolum (strain DSM 273

Query: 1   ALDLGAMTPF 10
           A+DLGA TPF
Sbjct: 139 AIDLGAFTPF 148


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   ALDLGAMTPF 10
           ALD+GAMTP 
Sbjct: 121 ALDIGAMTPL 130


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   ALDLGAMTPF 10
           A+D+GA+TPF
Sbjct: 122 AMDVGALTPF 131


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   ALDLGAMTPF 10
           ALD+GAMTP 
Sbjct: 121 ALDIGAMTPL 130


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   ALDLGAMTPF 10
           ALD+GAMTP 
Sbjct: 121 ALDIGAMTPL 130


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1   ALDLGAMTPF 10
           ALD+GAMTP 
Sbjct: 121 ALDIGAMTPL 130


>sp|NUOD2_CHLT3|NADH-QUINONE oxidoreductase subunit D 2|Chloroherpeton thalassium (strain ATCC

Query: 1   ALDLGAMTPF 10
           A+DLGA TPF
Sbjct: 143 AIDLGAFTPF 152


>sp|NUOD_THET2|NADH-QUINONE oxidoreductase subunit D|Thermus thermophilus (strain ATCC BAA-163

Query: 2   LDLGAMTPF 10
           LDLGA+TPF
Sbjct: 138 LDLGALTPF 146


>sp|NQO4_THET8|NADH-QUINONE oxidoreductase subunit 4|Thermus thermophilus (strain ATCC 27634

Query: 2   LDLGAMTPF 10
           LDLGA+TPF
Sbjct: 138 LDLGALTPF 146


>sp|NUOD_DEIRA|NADH-QUINONE oxidoreductase subunit D|Deinococcus radiodurans (strain ATCC 13939

Query: 2   LDLGAMTPF 10
           LDLGA+TPF
Sbjct: 130 LDLGALTPF 138


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   ALDLGAMTPF 10
           A+D+GA+TPF
Sbjct: 206 AMDVGALTPF 215


>sp|NUOD_DEIGD|NADH-QUINONE oxidoreductase subunit D|Deinococcus geothermalis (strain DSM 11300

Query: 2   LDLGAMTPF 10
           LDLGA+TPF
Sbjct: 132 LDLGALTPF 140




40|Sequence|196|205|AMTPFFWLFE

>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   AMTPFFWLFE 10
           AMTPFFWLFE
Sbjct: 196 AMTPFFWLFE 205


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   AMTPFFWLFE 10
           AMTPFFWLFE
Sbjct: 196 AMTPFFWLFE 205


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   AMTPFFWLFE 10
           AMTPFFWLFE
Sbjct: 196 AMTPFFWLFE 205


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   AMTPFFWLFE 10
           AMTPFFWLFE
Sbjct: 196 AMTPFFWLFE 205


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   AMTPFFWLFE 10
           AMTPFFW+FE
Sbjct: 196 AMTPFFWMFE 205


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   AMTPFFWLFE 10
           AMTPFFW+FE
Sbjct: 196 AMTPFFWMFE 205


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   AMTPFFWLFE 10
           AMTPFFW+FE
Sbjct: 215 AMTPFFWMFE 224


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   AMTPFFWLFE 10
           AMTPFFW+FE
Sbjct: 196 AMTPFFWMFE 205


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   AMTPFFWLFE 10
           A+TPF WLFE
Sbjct: 134 ALTPFLWLFE 143


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   AMTPFFWLFE 10
           AMTP  WLFE
Sbjct: 123 AMTPLLWLFE 132


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   AMTPFFWLFE 10
           AMTP  WLFE
Sbjct: 123 AMTPLLWLFE 132


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   AMTPFFWLFE 10
           AMTPF W FE
Sbjct: 131 AMTPFLWAFE 140


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   AMTPFFWLFE 10
           AMTP  WLFE
Sbjct: 123 AMTPLLWLFE 132


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   AMTPFFWLFE 10
           AM P FW+FE
Sbjct: 121 AMNPLFWMFE 130


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   AMTPFFWLFE 10
           AMTPF W FE
Sbjct: 129 AMTPFLWGFE 138


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1   AMTPFFWLFE 10
           AMTP  W+FE
Sbjct: 126 AMTPLLWMFE 135


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   AMTPFFWLFE 10
           AMTP  W+FE
Sbjct: 126 AMTPLLWMFE 135


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   AMTPFFWLFE 10
           AMTP  W+FE
Sbjct: 126 AMTPLLWMFE 135


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   AMTPFFWLFE 10
           AMTP  W+FE
Sbjct: 126 AMTPLLWMFE 135


>sp|DNM3A_MOUSE|DNA (cytosine-5)-methyltransferase 3A|Mus musculus (Mouse)

Query: 4   PFFWLFE 10
           PFFWLFE
Sbjct: 746 PFFWLFE 752


>sp|DNM3A_RAT|DNA (cytosine-5)-methyltransferase 3A|Rattus norvegicus (Rat)

Query: 4   PFFWLFE 10
           PFFWLFE
Sbjct: 746 PFFWLFE 752


>sp|DNM3A_HUMAN|DNA (cytosine-5)-methyltransferase 3A|Homo sapiens (Human)

Query: 4   PFFWLFE 10
           PFFWLFE
Sbjct: 750 PFFWLFE 756


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   AMTPFFWLFE 10
           A+TPF W FE
Sbjct: 131 ALTPFLWAFE 140


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1   AMTPFFWLFE 10
           A+TPF W FE
Sbjct: 139 ALTPFLWAFE 148


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1   AMTPFFWLFE 10
           A+TPF W FE
Sbjct: 139 ALTPFLWAFE 148


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   AMTPFFWLFE 10
           A+TPF W FE
Sbjct: 127 ALTPFLWAFE 136


>sp|DNM3A_CHICK|DNA (cytosine-5)-methyltransferase 3A|Gallus gallus (Chicken)

Query: 4   PFFWLFE 10
           PFFWLFE
Sbjct: 715 PFFWLFE 721


>sp|DNM3C_MOUSE|DNA (cytosine-5)-methyltransferase 3C|Mus musculus (Mouse)

Query: 4   PFFWLFE 10
           PFFW+FE
Sbjct: 578 PFFWMFE 584


>sp|DNM3B_HUMAN|DNA (cytosine-5)-methyltransferase 3B|Homo sapiens (Human)

Query: 4   PFFWLFE 10
           PFFW+FE
Sbjct: 691 PFFWMFE 697


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   AMTPFFWLFE 10
           AMTP  WLFE
Sbjct: 135 AMTPNLWLFE 144


>sp|DNM3B_MOUSE|DNA (cytosine-5)-methyltransferase 3B|Mus musculus (Mouse)

Query: 4   PFFWLFE 10
           PFFW+FE
Sbjct: 697 PFFWMFE 703


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1   AMTPFFWLFE 10
           AMTP  WLFE
Sbjct: 138 AMTPNLWLFE 147




41|Sequence|201|210|FWLFEEREKM

>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   FWLFEEREKM 10
           FW+FEEREKM
Sbjct: 126 FWMFEEREKM 135


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   FWLFEEREKM 10
           FWLFEEREKM
Sbjct: 201 FWLFEEREKM 210


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   FWLFEEREKM 10
           FWLFEEREKM
Sbjct: 201 FWLFEEREKM 210


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   FWLFEEREKM 10
           FWLFEEREKM
Sbjct: 201 FWLFEEREKM 210


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   FWLFEEREKM 10
           FWLFEEREKM
Sbjct: 201 FWLFEEREKM 210


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   FWLFEEREKM 10
           FW+FEEREKM
Sbjct: 201 FWMFEEREKM 210


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   FWLFEEREKM 10
           FW+FEEREKM
Sbjct: 201 FWMFEEREKM 210


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   FWLFEEREKM 10
           FW+FEEREKM
Sbjct: 201 FWMFEEREKM 210


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   FWLFEEREKM 10
           FW+FEEREK+
Sbjct: 220 FWMFEEREKL 229


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 139 LWLFEEREKL 148


>sp|NDUS2_PARTE|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Paramecium tetraurelia

Query: 1   FWLFEEREKM 10
           FW FEEREK+
Sbjct: 126 FWAFEEREKI 135


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 127 LWLFEEREKI 136


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 128 LWLFEEREKI 137


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1   FWLFEEREKM 10
            W+FEEREK+
Sbjct: 133 LWIFEEREKI 142


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 128 LWLFEEREKI 137


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 128 LWLFEEREKI 137


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   FWLFEEREKM 10
            W+FEEREK+
Sbjct: 134 LWMFEEREKI 143


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   FWLFEEREKM 10
            W+FEEREK+
Sbjct: 134 LWMFEEREKI 143


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1   FWLFEEREKM 10
            W+FEEREK+
Sbjct: 131 LWMFEEREKI 140


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   FWLFEEREKM 10
            W+FEEREK+
Sbjct: 131 LWMFEEREKI 140


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1   FWLFEEREKM 10
            W+FEERE++
Sbjct: 136 LWMFEERERL 145


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   FWLFEEREKM 10
            W+FEEREK+
Sbjct: 131 LWMFEEREKI 140


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   FWLFEEREKM 10
            W+FEEREK+
Sbjct: 131 LWMFEEREKI 140


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   FWLFEEREKM 10
            W FEEREK+
Sbjct: 132 LWAFEEREKL 141


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 2   WLFEEREKM 10
           W FEEREK+
Sbjct: 128 WCFEEREKL 136


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 129 LWLFEEREKI 138


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 129 LWLFEEREKI 138


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 129 LWLFEEREKI 138


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 127 LWLFEEREKI 136


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 129 LWLFEEREKI 138


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 129 LWLFEEREKI 138


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 129 LWLFEEREKI 138


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 129 LWLFEEREKI 138


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 129 LWLFEEREKI 138


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1   FWLFEEREKM 10
            WLFEEREK+
Sbjct: 129 LWLFEEREKI 138


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   FWLFEEREKM 10
            W FEEREK+
Sbjct: 136 LWAFEEREKL 145


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   FWLFEEREKM 10
            W FEEREK+
Sbjct: 132 LWAFEEREKL 141


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   FWLFEEREKM 10
            W FEEREK+
Sbjct: 136 LWAFEEREKL 145




42|Sequence|206|215|EREKMFEFYE

>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   EREKMFEFYE 10
           EREKMFEFYE
Sbjct: 206 EREKMFEFYE 215


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   EREKMFEFYE 10
           EREKMFEFYE
Sbjct: 206 EREKMFEFYE 215


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   EREKMFEFYE 10
           EREKMFEFYE
Sbjct: 206 EREKMFEFYE 215


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   EREKMFEFYE 10
           EREKMFEFYE
Sbjct: 206 EREKMFEFYE 215


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   EREKMFEFYE 10
           EREKMFEFYE
Sbjct: 206 EREKMFEFYE 215


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   EREKMFEFYE 10
           EREKMFEFYE
Sbjct: 206 EREKMFEFYE 215


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   EREKMFEFYE 10
           EREKMFEFYE
Sbjct: 206 EREKMFEFYE 215


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   EREKMFEFYE 10
           EREK+ EFYE
Sbjct: 221 EREKLMEFYE 230


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   EREKMFEFYE 10
           EREK+ EFYE
Sbjct: 137 EREKLLEFYE 146


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   EREKMFEFYE 10
           EREK+ EFYE
Sbjct: 159 EREKLIEFYE 168


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1   EREKMFEFYE 10
           EREK+ EFYE
Sbjct: 135 EREKLMEFYE 144


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   EREKMFEFYE 10
           EREK+ EFYE
Sbjct: 137 EREKLLEFYE 146


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus

Query: 2  REKMFEFYE 10
          REKMFEFYE
Sbjct: 20 REKMFEFYE 28




43|Sequence|211|220|FEFYERVSGA

>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   FEFYERVSGA 10
           FEFYERVSGA
Sbjct: 211 FEFYERVSGA 220


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   FEFYERVSGA 10
           FEFYERVSGA
Sbjct: 211 FEFYERVSGA 220


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   FEFYERVSGA 10
           FEFYERVSGA
Sbjct: 211 FEFYERVSGA 220


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   FEFYERVSGA 10
           FEFYERVSGA
Sbjct: 211 FEFYERVSGA 220


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   FEFYERVSGA 10
           FEFYERVSGA
Sbjct: 211 FEFYERVSGA 220


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   FEFYERVSGA 10
           FEFYERVSGA
Sbjct: 211 FEFYERVSGA 220


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   FEFYERVSGA 10
           FEFYERVSGA
Sbjct: 211 FEFYERVSGA 220


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   FEFYERVSGA 10
            EFYERVSGA
Sbjct: 142 LEFYERVSGA 151


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   FEFYERVSGA 10
            EFYERVSGA
Sbjct: 142 LEFYERVSGA 151


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 2   EFYERVSGA 10
           EFYERVSGA
Sbjct: 227 EFYERVSGA 235


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 2   EFYERVSGA 10
           EFYERVSGA
Sbjct: 150 EFYERVSGA 158


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 2   EFYERVSGA 10
           EFYERVSGA
Sbjct: 145 EFYERVSGA 153


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 2   EFYERVSGA 10
           EFYERVSGA
Sbjct: 147 EFYERVSGA 155


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 2   EFYERVSGA 10
           EFYERVSGA
Sbjct: 149 EFYERVSGA 157


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   FEFYERVSGA 10
           FEF ERVSGA
Sbjct: 230 FEFSERVSGA 239


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 2   EFYERVSGA 10
           EFYERVSG+
Sbjct: 138 EFYERVSGS 146


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 2   EFYERVSGA 10
           EFYERVSG+
Sbjct: 138 EFYERVSGS 146


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 2   EFYERVSGA 10
           EFYERVSG+
Sbjct: 140 EFYERVSGS 148


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 2   EFYERVSGA 10
           EFYERVSG+
Sbjct: 140 EFYERVSGS 148


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 2   EFYERVSGA 10
           EFYERVSG+
Sbjct: 140 EFYERVSGS 148


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   FEFYERVSGA 10
            EFYERVSGA
Sbjct: 146 MEFYERVSGA 155


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 2   EFYERVSGA 10
           EFYERVSGA
Sbjct: 155 EFYERVSGA 163


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 2   EFYERVSGA 10
           EFYERVSGA
Sbjct: 155 EFYERVSGA 163


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 2   EFYERVSGA 10
           EFYERVSG+
Sbjct: 140 EFYERVSGS 148


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 2   EFYERVSGA 10
           EFYERVSG+
Sbjct: 140 EFYERVSGS 148


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 2   EFYERVSGA 10
           EFYERVSG+
Sbjct: 145 EFYERVSGS 153


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 2   EFYERVSGA 10
           EFYERVSG+
Sbjct: 147 EFYERVSGS 155


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 2   EFYERVSGA 10
           EFYERVSG+
Sbjct: 145 EFYERVSGS 153




44|Sequence|216|225|RVSGARMHAA

>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1   RVSGARMHAA 10
           RVSGARMHAA
Sbjct: 159 RVSGARMHAA 168


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1   RVSGARMHAA 10
           RVSGARMHAA
Sbjct: 159 RVSGARMHAA 168


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   RVSGARMHAA 10
           RVSGARMHAA
Sbjct: 154 RVSGARMHAA 163


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   RVSGARMHAA 10
           RVSGARMHAA
Sbjct: 149 RVSGARMHAA 158


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   RVSGARMHAA 10
           RVSGARMHAA
Sbjct: 216 RVSGARMHAA 225


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   RVSGARMHAA 10
           RVSGARMHAA
Sbjct: 216 RVSGARMHAA 225


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   RVSGARMHAA 10
           RVSGARMHAA
Sbjct: 216 RVSGARMHAA 225


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   RVSGARMHAA 10
           RVSGARMHAA
Sbjct: 153 RVSGARMHAA 162


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   RVSGARMHAA 10
           RVSGARMHAA
Sbjct: 216 RVSGARMHAA 225


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   RVSGARMHAA 10
           RVSGARMHAA
Sbjct: 216 RVSGARMHAA 225


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   RVSGARMHAA 10
           RVSGARMHAA
Sbjct: 216 RVSGARMHAA 225


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   RVSGARMHAA 10
           RVSGARMHAA
Sbjct: 216 RVSGARMHAA 225


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   RVSGARMHAA 10
           RVSGARMHA+
Sbjct: 151 RVSGARMHAS 160


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   RVSGARMHAA 10
           RVSG+RMHAA
Sbjct: 151 RVSGSRMHAA 160


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   RVSGARMHA 9
           RVSGARMHA
Sbjct: 235 RVSGARMHA 243


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   RVSGARMHAA 10
           RVSGARMHA+
Sbjct: 147 RVSGARMHAS 156


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1   RVSGARMHAA 10
           R SGARMHAA
Sbjct: 158 RASGARMHAA 167


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1   RVSGARMHAA 10
           R SGARMHAA
Sbjct: 145 RASGARMHAA 154


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   RVSGARMHA 9
           RVSGARMHA
Sbjct: 149 RVSGARMHA 157


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1   RVSGARMHAA 10
           R SGARMHAA
Sbjct: 145 RASGARMHAA 154


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   RVSGARMHAA 10
           RVSGARMHA+
Sbjct: 151 RVSGARMHAS 160


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   RVSGARMHAA 10
           RVSGARMHA+
Sbjct: 147 RVSGARMHAS 156


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. mediasiatica

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   RVSGARMHAA 10
           RVSGAR+HAA
Sbjct: 231 RVSGARLHAA 240


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 145 VSGARMHAA 153


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain DSM

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 145 VSGARMHAA 153


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 145 VSGARMHAA 153


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 145 VSGARMHAA 153


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 145 VSGARMHAA 153


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 145 VSGARMHAA 153


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain K96243)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain LB400)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain DSM

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain CJ2)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 162 VSGARMHAA 170


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 162 VSGARMHAA 170


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 162 VSGARMHAA 170


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM 17343

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 162 VSGARMHAA 170


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 162 VSGARMHAA 170


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 162 VSGARMHAA 170


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP 134

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 162 VSGARMHAA 170


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 162 VSGARMHAA 170


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 2   VSGARMHAA 10
           VSGARMHAA
Sbjct: 144 VSGARMHAA 152




45|Sequence|221|230|RMHAAYIRPG

>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1   RMHAAYIRPG 10
           RMHAAYIRPG
Sbjct: 164 RMHAAYIRPG 173


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1   RMHAAYIRPG 10
           RMHAAYIRPG
Sbjct: 164 RMHAAYIRPG 173


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   RMHAAYIRPG 10
           RMHAAYIRPG
Sbjct: 154 RMHAAYIRPG 163


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   RMHAAYIRPG 10
           RMHAAYIRPG
Sbjct: 159 RMHAAYIRPG 168


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   RMHAAYIRPG 10
           RMHAAYIRPG
Sbjct: 156 RMHAAYIRPG 165


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus

Query: 1  RMHAAYIRPG 10
          RMHAAYIRPG
Sbjct: 29 RMHAAYIRPG 38


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   RMHAAYIRPG 10
           RMHAAYIRPG
Sbjct: 158 RMHAAYIRPG 167


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   RMHAAYIRPG 10
           RMHAAYIRPG
Sbjct: 221 RMHAAYIRPG 230


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   RMHAAYIRPG 10
           RMHAAYIRPG
Sbjct: 221 RMHAAYIRPG 230


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   RMHAAYIRPG 10
           RMHAAYIRPG
Sbjct: 221 RMHAAYIRPG 230


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   RMHAAYIRPG 10
           RMHAAYIRPG
Sbjct: 221 RMHAAYIRPG 230


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1   RMHAAYIRPG 10
           RMHAAYIRPG
Sbjct: 150 RMHAAYIRPG 159


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   RMHAAYIRPG 10
           RMHAAYIRPG
Sbjct: 221 RMHAAYIRPG 230


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   RMHAAYIRPG 10
           RMHAAYIRPG
Sbjct: 221 RMHAAYIRPG 230


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1   RMHAAYIRPG 10
           RMHAAY+RPG
Sbjct: 150 RMHAAYVRPG 159


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   RMHAAYIRPG 10
           RMHAAY+RPG
Sbjct: 221 RMHAAYVRPG 230


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   RMHAAYIRPG 10
           RMHA+YIRPG
Sbjct: 156 RMHASYIRPG 165


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. mediasiatica

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1   RMHAAYIRPG 10
           RMH+AY+RPG
Sbjct: 150 RMHSAYVRPG 159


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain CJ2)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 149 RMHAAYFRPG 158


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 149 RMHAAYFRPG 158


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 149 RMHAAYFRPG 158


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 158 RMHAAYFRPG 167


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 149 RMHAAYFRPG 158


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 149 RMHAAYFRPG 158


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 149 RMHAAYFRPG 158


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG 29417

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   RMHAAYIRPG 10
           R HAAYIRPG
Sbjct: 146 RFHAAYIRPG 155


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 158 RMHAAYFRPG 167


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 150 RMHAAYFRPG 159


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 147 RMHAAYFRPG 156


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain EF01-2)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYFRPG 157


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   RMHAAYIRPG 10
           R HAAYIRPG
Sbjct: 148 RFHAAYIRPG 157


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   RMHAAYIRPG 10
           R HAAYIRPG
Sbjct: 148 RFHAAYIRPG 157


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   RMHAAYIRPG 10
           R+HAAY+RPG
Sbjct: 236 RLHAAYVRPG 245


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   RMHAAYIRPG 10
           RMHA++IRPG
Sbjct: 152 RMHASFIRPG 161


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   RMHAAYIRPG 10
           RMHA++IRPG
Sbjct: 152 RMHASFIRPG 161


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   RMHAAYIRPG 10
           R HAAYIRPG
Sbjct: 148 RFHAAYIRPG 157


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1   RMHAAYIRPG 10
           R HAAYIRPG
Sbjct: 156 RFHAAYIRPG 165


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain DSM

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 147 RMHANYFRPG 156


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   RMHAAYIRPG 10
           RMHA+Y RPG
Sbjct: 156 RMHASYFRPG 165


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 166 RMHAAYYRPG 175


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 166 RMHAAYYRPG 175


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 166 RMHAAYYRPG 175


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 166 RMHAAYYRPG 175


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain LB400)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain DSM

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   RMHAAYIRPG 10
           RMHA Y+RPG
Sbjct: 240 RMHANYVRPG 249


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 166 RMHAAYYRPG 175


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 166 RMHAAYYRPG 175


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 166 RMHAAYYRPG 175


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 166 RMHAAYYRPG 175


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 166 RMHAAYYRPG 175


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 166 RMHAAYYRPG 175


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 166 RMHAAYYRPG 175


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 166 RMHAAYYRPG 175


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain K96243)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 166 RMHAAYYRPG 175


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM 17343

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 166 RMHAAYYRPG 175


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP 134

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   RMHAAYIRPG 10
           RMHAAY RPG
Sbjct: 148 RMHAAYYRPG 157


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   RMHAAYIRPG 10
           RMH+AY RPG
Sbjct: 162 RMHSAYFRPG 171


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1   RMHAAYIRPG 10
           R+HAAY RPG
Sbjct: 169 RLHAAYFRPG 178


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17023

Query: 1   RMHAAYIRPG 10
           R+HAAY RPG
Sbjct: 161 RLHAAYFRPG 170


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17029

Query: 1   RMHAAYIRPG 10
           R+HAAY RPG
Sbjct: 159 RLHAAYFRPG 168


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040) (Silicibacter

Query: 1   RMHAAYIRPG 10
           R+HAAY RPG
Sbjct: 160 RLHAAYFRPG 169


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17025

Query: 1   RMHAAYIRPG 10
           R+HAAY RPG
Sbjct: 159 RLHAAYFRPG 168


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1   RMHAAYIRPG 10
           R+HAAY RPG
Sbjct: 161 RLHAAYFRPG 170


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1   RMHAAYIRPG 10
           R H+AYIRPG
Sbjct: 151 RFHSAYIRPG 160


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1   RMHAAYIRPG 10
           R+HAAY RPG
Sbjct: 162 RLHAAYFRPG 171


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1   RMHAAYIRPG 10
           R+HAAY RPG
Sbjct: 162 RLHAAYFRPG 171


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 1   RMHAAYIRPG 10
           R+HAAY RPG
Sbjct: 168 RLHAAYFRPG 177


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd 1222)

Query: 1   RMHAAYIRPG 10
           R+HAAY RPG
Sbjct: 168 RLHAAYFRPG 177


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   RMHAAYIRPG 10
           R H+AYIRPG
Sbjct: 151 RFHSAYIRPG 160


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1   RMHAAYIRPG 10
           R H+AYIRPG
Sbjct: 153 RFHSAYIRPG 162


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   RMHAAYIRPG 10
           R H+AYIRPG
Sbjct: 151 RFHSAYIRPG 160


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1   RMHAAYIRPG 10
           RMHAA+ RPG
Sbjct: 163 RMHAAWFRPG 172


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   RMHAAYIRPG 10
           R H+AYIRPG
Sbjct: 151 RFHSAYIRPG 160


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1   RMHAAYIRPG 10
           RMHAA+ RPG
Sbjct: 150 RMHAAWFRPG 159


>sp|NUOD_MYCPA|NADH-QUINONE oxidoreductase subunit D|Mycolicibacterium paratuberculosis (strain

Query: 1   RMHAAYIRPG 10
           RM++AYIRPG
Sbjct: 183 RMNSAYIRPG 192


>sp|NUOD_MYCA1|NADH-QUINONE oxidoreductase subunit D|Mycobacterium avium (strain 104)

Query: 1   RMHAAYIRPG 10
           RM++AYIRPG
Sbjct: 183 RMNSAYIRPG 192


>sp|NUOD_MYCGI|NADH-QUINONE oxidoreductase subunit D|Mycolicibacterium gilvum (strain PYR-GCK)

Query: 1   RMHAAYIRPG 10
           RM++AYIRPG
Sbjct: 190 RMNSAYIRPG 199


>sp|NUOD_MYCTU|NADH-QUINONE oxidoreductase subunit D|Mycobacterium tuberculosis (strain ATCC

Query: 1   RMHAAYIRPG 10
           RM++AYIRPG
Sbjct: 182 RMNSAYIRPG 191


>sp|NUOD_MYCTO|NADH-QUINONE oxidoreductase subunit D|Mycobacterium tuberculosis (strain CDC

Query: 1   RMHAAYIRPG 10
           RM++AYIRPG
Sbjct: 182 RMNSAYIRPG 191


>sp|NUOD_MYCTA|NADH-QUINONE oxidoreductase subunit D|Mycobacterium tuberculosis (strain ATCC

Query: 1   RMHAAYIRPG 10
           RM++AYIRPG
Sbjct: 182 RMNSAYIRPG 191


>sp|NUOD_MYCBP|NADH-QUINONE oxidoreductase subunit D|Mycobacterium bovis (strain BCG /

Query: 1   RMHAAYIRPG 10
           RM++AYIRPG
Sbjct: 182 RMNSAYIRPG 191


>sp|NUOD_MYCBO|NADH-QUINONE oxidoreductase subunit D|Mycobacterium bovis (strain ATCC BAA-935

Query: 1   RMHAAYIRPG 10
           RM++AYIRPG
Sbjct: 182 RMNSAYIRPG 191


>sp|NUOD_MYCUA|NADH-QUINONE oxidoreductase subunit D|Mycobacterium ulcerans (strain Agy99)

Query: 1   RMHAAYIRPG 10
           RM++AYIRPG
Sbjct: 174 RMNSAYIRPG 183


>sp|NUOD_MYCMM|NADH-QUINONE oxidoreductase subunit D|Mycobacterium marinum (strain ATCC BAA-535

Query: 1   RMHAAYIRPG 10
           RM++AYIRPG
Sbjct: 174 RMNSAYIRPG 183


>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 155 RMHANYFRPG 164


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 148 RMHATYYRPG 157


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 154 RMHANYFRPG 163


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 150 RMHANYFRPG 159


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 148 RMHATYYRPG 157


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   RMHAAYIRPG 10
           R+HAAY RPG
Sbjct: 148 RLHAAYYRPG 157


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 148 RMHATYYRPG 157


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1   RMHAAYIRPG 10
           R+HAAY RPG
Sbjct: 148 RLHAAYYRPG 157


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 148 RMHATYYRPG 157


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 148 RMHATYYRPG 157


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 148 RMHATYYRPG 157


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp. pneumophila

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 148 RMHATYYRPG 157


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 148 RMHATYYRPG 157


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 148 RMHATYYRPG 157


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 148 RMHATYYRPG 157


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 148 RMHATYYRPG 157


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 148 RMHATYYRPG 157


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 148 RMHATYYRPG 157


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 148 RMHATYYRPG 157


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   RMHAAYIRPG 10
           RMH+A+ RPG
Sbjct: 160 RMHSAWFRPG 169


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 156 RMHAHYFRPG 165


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   RMHAAYIRPG 10
           RMHA Y RPG
Sbjct: 167 RMHATYYRPG 176




46|Sequence|226|235|YIRPGGVHQD

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   YIRPGGVHQD 10
           YIRPGGVHQD
Sbjct: 226 YIRPGGVHQD 235


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   YIRPGGVHQD 10
           YIRPGGVHQD
Sbjct: 226 YIRPGGVHQD 235


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   YIRPGGVHQD 10
           YIRPGGVHQD
Sbjct: 226 YIRPGGVHQD 235


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   YIRPGGVHQD 10
           YIRPGGVHQD
Sbjct: 226 YIRPGGVHQD 235


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   YIRPGGVHQD 10
           YIRPGGVHQD
Sbjct: 226 YIRPGGVHQD 235


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   YIRPGGVHQD 10
           YIRPGGVHQD
Sbjct: 226 YIRPGGVHQD 235


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus

Query: 1  YIRPGGVHQD 10
          YIRPGGVHQD
Sbjct: 34 YIRPGGVHQD 43


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1   YIRPGGVHQD 10
           YIRPGGVHQD
Sbjct: 155 YIRPGGVHQD 164


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 177 YFRPGGVHQD 186


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   YIRPGGVHQD 10
           Y+RPGGVHQD
Sbjct: 241 YVRPGGVHQD 250


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   YIRPGGVHQD 10
           Y+RPGGVHQD
Sbjct: 226 YVRPGGVHQD 235


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 161 YFRPGGVHQD 170


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1   YIRPGGVHQD 10
           Y+RPGGVHQD
Sbjct: 155 YVRPGGVHQD 164


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1   YIRPGGVHQD 10
           Y+RPGGVHQD
Sbjct: 155 YVRPGGVHQD 164


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 167 YFRPGGVHQD 176


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 173 YFRPGGVHQD 182


>sp|NUOD_BARBK|NADH-QUINONE oxidoreductase subunit D|Bartonella bacilliformis (strain ATCC

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 163 YFRPGGVHQD 172


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG 29417

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17023

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 166 YFRPGGVHQD 175


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17029

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 164 YFRPGGVHQD 173


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040) (Silicibacter

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 165 YFRPGGVHQD 174


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd 1222)

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 173 YFRPGGVHQD 182


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 163 YFRPGGVHQD 172


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 173 YFRPGGVHQD 182


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17025

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 164 YFRPGGVHQD 173


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 174 YFRPGGVHQD 183


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 166 YFRPGGVHQD 175


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC 19089

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 159 YFRPGGVHQD 168


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 167 YFRPGGVHQD 176


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 167 YFRPGGVHQD 176


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC BAA-705

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 155 YFRPGGVHQD 164


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1   YIRPGGVHQD 10
           Y RPGGVHQD
Sbjct: 152 YFRPGGVHQD 161


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 164 YIRPGGVAQD 173


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 159 YIRPGGVSQD 168


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1   YIRPGGVHQD 10
           + RPGGVHQD
Sbjct: 168 WFRPGGVHQD 177


>sp|NUOD_THEFY|NADH-QUINONE oxidoreductase subunit D|Thermobifida fusca (strain YX)

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 179 YIRPGGVAQD 188


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   YIRPGGVHQD 10
           + RPGGVHQD
Sbjct: 165 WFRPGGVHQD 174


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain HTCC2594)

Query: 1   YIRPGGVHQD 10
           + RPGGVHQD
Sbjct: 165 WFRPGGVHQD 174


>sp|NUOD1_SALAI|NADH-QUINONE oxidoreductase subunit D 1|Salinispora arenicola (strain CNS-205)

Query: 1   YIRPGGVHQD 10
           Y+RPGGV QD
Sbjct: 188 YVRPGGVAQD 197


>sp|NUOD_MYCTU|NADH-QUINONE oxidoreductase subunit D|Mycobacterium tuberculosis (strain ATCC

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 187 YIRPGGVAQD 196


>sp|NUOD_MYCTO|NADH-QUINONE oxidoreductase subunit D|Mycobacterium tuberculosis (strain CDC

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 187 YIRPGGVAQD 196


>sp|NUOD_MYCTA|NADH-QUINONE oxidoreductase subunit D|Mycobacterium tuberculosis (strain ATCC

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 187 YIRPGGVAQD 196


>sp|NUOD_MYCBP|NADH-QUINONE oxidoreductase subunit D|Mycobacterium bovis (strain BCG /

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 187 YIRPGGVAQD 196


>sp|NUOD_MYCBO|NADH-QUINONE oxidoreductase subunit D|Mycobacterium bovis (strain ATCC BAA-935

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 187 YIRPGGVAQD 196


>sp|NUOD_MYCPA|NADH-QUINONE oxidoreductase subunit D|Mycolicibacterium paratuberculosis (strain

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 188 YIRPGGVAQD 197


>sp|NUOD_MYCA1|NADH-QUINONE oxidoreductase subunit D|Mycobacterium avium (strain 104)

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 188 YIRPGGVAQD 197


>sp|NUOD_MYCUA|NADH-QUINONE oxidoreductase subunit D|Mycobacterium ulcerans (strain Agy99)

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 179 YIRPGGVAQD 188


>sp|NUOD_MYCMM|NADH-QUINONE oxidoreductase subunit D|Mycobacterium marinum (strain ATCC BAA-535

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 179 YIRPGGVAQD 188


>sp|NUOD1_SALTO|NADH-QUINONE oxidoreductase subunit D 1|Salinispora tropica (strain ATCC BAA-916

Query: 1   YIRPGGVHQD 10
           Y+RPGGV QD
Sbjct: 188 YVRPGGVAQD 197


>sp|NUOD_HELMI|NADH-QUINONE oxidoreductase subunit D|Heliobacterium modesticaldum (strain ATCC

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 152 YIRPGGVAQD 161


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 161 YIRPGGVAQD 170


>sp|NUOD_RHOJR|NADH-QUINONE oxidoreductase subunit D|Rhodococcus jostii (strain RHA1)

Query: 1   YIRPGGVHQD 10
           YIRPGG+ QD
Sbjct: 185 YIRPGGLSQD 194


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   YIRPGGVHQD 10
           +IRPGGV QD
Sbjct: 157 FIRPGGVAQD 166


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   YIRPGGVHQD 10
           Y R GGVHQD
Sbjct: 154 YFRAGGVHQD 163


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   YIRPGGVHQD 10
           Y RPGGV QD
Sbjct: 159 YFRPGGVSQD 168


>sp|NUOD_ACIC1|NADH-QUINONE oxidoreductase subunit D|Acidothermus cellulolyticus (strain ATCC

Query: 1   YIRPGGVHQD 10
           YIRPGGV QD
Sbjct: 187 YIRPGGVIQD 196


>sp|NUOD_FRACC|NADH-QUINONE oxidoreductase subunit D|Frankia casuarinae (strain DSM 45818

Query: 1   YIRPGGVHQD 10
           YIRPGG+ QD
Sbjct: 229 YIRPGGLAQD 238


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1   YIRPGGVHQD 10
           Y RPGGVH+D
Sbjct: 153 YYRPGGVHRD 162


>sp|NUOD_PARS2|NADH-QUINONE oxidoreductase subunit D|Parafrankia sp. (strain EAN1pec)

Query: 1   YIRPGGVHQD 10
           YIRPGG+ QD
Sbjct: 204 YIRPGGLAQD 213


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   YIRPGGVHQD 10
           +IRPGGV QD
Sbjct: 157 FIRPGGVAQD 166


>sp|NUOD1_STRAW|NADH-QUINONE oxidoreductase subunit D 1|Streptomyces avermitilis (strain ATCC

Query: 1   YIRPGGVHQD 10
           YIRPGG+ QD
Sbjct: 190 YIRPGGLAQD 199


>sp|NUOD2_STRCO|NADH-QUINONE oxidoreductase subunit D 2|Streptomyces coelicolor (strain ATCC

Query: 1   YIRPGGVHQD 10
           YIRPGG+ QD
Sbjct: 187 YIRPGGLAQD 196


>sp|NUOD_NOCSJ|NADH-QUINONE oxidoreductase subunit D|Nocardioides sp. (strain ATCC BAA-499

Query: 1   YIRPGGVHQD 10
           +IRPGGV QD
Sbjct: 190 FIRPGGVAQD 199


>sp|NUOD_NOCFA|NADH-QUINONE oxidoreductase subunit D|Nocardia farcinica (strain IFM 10152)

Query: 1   YIRPGGVHQD 10
           YIRPGG+ QD
Sbjct: 200 YIRPGGLAQD 209


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   YIRPGGVHQD 10
           Y RPGGV QD
Sbjct: 161 YFRPGGVSQD 170


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   YIRPGGVHQD 10
           Y RPGGV QD
Sbjct: 159 YFRPGGVAQD 168


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 1   YIRPGGVHQD 10
           Y RPGGVH D
Sbjct: 155 YFRPGGVHID 164


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1   YIRPGGVHQD 10
           Y RPGGV++D
Sbjct: 153 YFRPGGVYRD 162


>sp|NUOD_MYCA9|NADH-QUINONE oxidoreductase subunit D|Mycobacteroides abscessus (strain ATCC

Query: 1   YIRPGGVHQD 10
           Y+RPGG+ QD
Sbjct: 179 YVRPGGLAQD 188


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1   YIRPGGVHQD 10
           Y RPGGV++D
Sbjct: 153 YFRPGGVYRD 162


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   YIRPGGVHQD 10
           Y RPGGV++D
Sbjct: 154 YFRPGGVYRD 163


>sp|NUOD_SACEN|NADH-QUINONE oxidoreductase subunit D|Saccharopolyspora erythraea (strain ATCC

Query: 1   YIRPGGVHQD 10
           ++RPGGV QD
Sbjct: 196 FVRPGGVAQD 205


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1   YIRPGGVHQD 10
           Y RPGGV++D
Sbjct: 171 YYRPGGVYRD 180


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1   YIRPGGVHQD 10
           Y RPGGV++D
Sbjct: 171 YYRPGGVYRD 180


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1   YIRPGGVHQD 10
           Y RPGGV++D
Sbjct: 171 YYRPGGVYRD 180


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1   YIRPGGVHQD 10
           Y RPGGV++D
Sbjct: 171 YYRPGGVYRD 180




47|Sequence|231|240|GVHQDLPLGL

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   GVHQDLPLGL 10
           GVHQDLPLGL
Sbjct: 231 GVHQDLPLGL 240


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   GVHQDLPLGL 10
           GVHQDLPLGL
Sbjct: 231 GVHQDLPLGL 240


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   GVHQDLPLGL 10
           GVHQDLPLGL
Sbjct: 231 GVHQDLPLGL 240


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   GVHQDLPLGL 10
           GVHQDLPLGL
Sbjct: 231 GVHQDLPLGL 240


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   GVHQDLPLGL 10
           GVHQDLPLGL
Sbjct: 231 GVHQDLPLGL 240


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   GVHQDLPLGL 10
           GVHQDLPLGL
Sbjct: 231 GVHQDLPLGL 240


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   GVHQDLPLGL 10
           GVHQDLPLGL
Sbjct: 231 GVHQDLPLGL 240


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus

Query: 1  GVHQDLPLGL 10
          GVHQDLPLGL
Sbjct: 39 GVHQDLPLGL 48


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   GVHQDLPLGL 10
           GVHQDLP+GL
Sbjct: 159 GVHQDLPMGL 168


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   GVHQDLPLGL 10
           GVHQD+PLGL
Sbjct: 246 GVHQDIPLGL 255


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   GVHQDLPLGL 10
           GV QDLPLGL
Sbjct: 162 GVAQDLPLGL 171


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   GVHQDLPLGL 10
           GV QDLPLGL
Sbjct: 162 GVAQDLPLGL 171


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   GVHQDLPLGL 10
           GVHQDLP+ L
Sbjct: 166 GVHQDLPMKL 175


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1   GVHQDLPLGL 10
           GVHQDLP GL
Sbjct: 160 GVHQDLPPGL 169


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1   GVHQDLPLGL 10
           GVHQD+PL L
Sbjct: 173 GVHQDVPLKL 182


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   GVHQDLPLGL 10
           GVHQD+PL L
Sbjct: 170 GVHQDVPLKL 179




48|Sequence|236|245|LPLGLMDDIY

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   LPLGLMDDIY 10
           LPLGLMDDIY
Sbjct: 236 LPLGLMDDIY 245


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   LPLGLMDDIY 10
           LPLGLMDDIY
Sbjct: 236 LPLGLMDDIY 245


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   LPLGLMDDIY 10
           LPLGLMDDIY
Sbjct: 236 LPLGLMDDIY 245


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   LPLGLMDDIY 10
           LPLGLMDDIY
Sbjct: 236 LPLGLMDDIY 245


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   LPLGLMDDIY 10
           LPLGLMDDIY
Sbjct: 236 LPLGLMDDIY 245


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   LPLGLMDDIY 10
           LPLGLMDDIY
Sbjct: 236 LPLGLMDDIY 245


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   LPLGLMDDIY 10
           LP+GLMDDIY
Sbjct: 255 LPIGLMDDIY 264


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   LPLGLMDDIY 10
           LPLGL+DDIY
Sbjct: 236 LPLGLLDDIY 245


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus

Query: 1  LPLGLMDDIY 10
          LPLGLMDDIY
Sbjct: 44 LPLGLMDDIY 53


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   LPLGLMDDIY 10
           +PLGL+DDIY
Sbjct: 251 IPLGLLDDIY 260


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   LPLGLMDDIY 10
           LPLGL +DIY
Sbjct: 173 LPLGLCEDIY 182




49|Sequence|241|250|MDDIYQFSKN

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   MDDIYQFSKN 10
           MDDIYQFSKN
Sbjct: 241 MDDIYQFSKN 250


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   MDDIYQFSKN 10
           MDDIYQFSKN
Sbjct: 241 MDDIYQFSKN 250


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   MDDIYQFSKN 10
           MDDIYQFSKN
Sbjct: 241 MDDIYQFSKN 250


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   MDDIYQFSKN 10
           MDDIYQFSKN
Sbjct: 241 MDDIYQFSKN 250


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   MDDIYQFSKN 10
           MDDIY+FSKN
Sbjct: 241 MDDIYEFSKN 250


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   MDDIYQFSKN 10
           MDDIY+FSKN
Sbjct: 241 MDDIYEFSKN 250


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   MDDIYQFSKN 10
           +DDIY+FSKN
Sbjct: 241 LDDIYEFSKN 250


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus

Query: 1  MDDIYQFSKN 10
          MDDIY+FSKN
Sbjct: 49 MDDIYEFSKN 58




50|Sequence|246|255|QFSKNFSLRL

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   QFSKNFSLRL 10
           QFSKNFSLRL
Sbjct: 246 QFSKNFSLRL 255


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   QFSKNFSLRL 10
           QFSKNFSLRL
Sbjct: 246 QFSKNFSLRL 255


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   QFSKNFSLRL 10
           QFSKNFSLRL
Sbjct: 246 QFSKNFSLRL 255


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   QFSKNFSLRL 10
           QFSKNFSLRL
Sbjct: 246 QFSKNFSLRL 255


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   QFSKNFSLRL 10
           +FSKNFSLR+
Sbjct: 246 EFSKNFSLRI 255


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   QFSKNFSLRL 10
           +FSKNFSLR+
Sbjct: 246 EFSKNFSLRI 255


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus

Query: 1  QFSKNFSLRL 10
          +FSKNFSLR+
Sbjct: 54 EFSKNFSLRI 63


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   QFSKNFSLRL 10
           +FSKNFSLR+
Sbjct: 246 EFSKNFSLRI 255




51|Sequence|251|260|FSLRLDELEE

>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   FSLRLDELEE 10
           FSLRLDELEE
Sbjct: 251 FSLRLDELEE 260


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   FSLRLDELEE 10
           FSLRLDELEE
Sbjct: 251 FSLRLDELEE 260


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   FSLRLDELEE 10
           FSLRLDELEE
Sbjct: 251 FSLRLDELEE 260


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   FSLRLDELEE 10
           FSLRLDELEE
Sbjct: 251 FSLRLDELEE 260


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   FSLRLDELEE 10
           FSLR+DELEE
Sbjct: 251 FSLRIDELEE 260


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   FSLRLDELEE 10
           FSLR+DE+EE
Sbjct: 251 FSLRIDEVEE 260


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   FSLRLDELEE 10
           FSLR+DE+EE
Sbjct: 251 FSLRIDEVEE 260


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   FSLRLDELEE 10
           FS+RLDE+EE
Sbjct: 186 FSVRLDEIEE 195




52|Sequence|256|265|DELEELLTNN

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   DELEELLTNN 10
           DELEELLTNN
Sbjct: 256 DELEELLTNN 265


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   DELEELLTNN 10
           DELEELLTNN
Sbjct: 256 DELEELLTNN 265


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   DELEELLTNN 10
           DELEELLTNN
Sbjct: 256 DELEELLTNN 265


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   DELEELLTNN 10
           DELEELLTNN
Sbjct: 256 DELEELLTNN 265


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   DELEELLTNN 10
           DELEE+LTNN
Sbjct: 256 DELEEMLTNN 265


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   DELEELLTNN 10
           DE+EELLTNN
Sbjct: 191 DEIEELLTNN 200


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   DELEELLTNN 10
           DE+EE+LTNN
Sbjct: 191 DEMEEMLTNN 200


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   DELEELLTNN 10
           DE+EE+LTNN
Sbjct: 256 DEVEEMLTNN 265


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   DELEELLTNN 10
           DE+EE+LTNN
Sbjct: 256 DEVEEMLTNN 265


>sp|NUOD2_SOLUE|NADH-QUINONE oxidoreductase subunit D 2|Solibacter usitatus (strain Ellin6076)

Query: 1   DELEELLTNN 10
           DE EELLTNN
Sbjct: 188 DEYEELLTNN 197


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus

Query: 1  DELEELLTNN 10
          DE+EE+LTNN
Sbjct: 64 DEVEEMLTNN 73




53|Sequence|261|270|LLTNNRIWRN

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   LLTNNRIWRN 10
           LLTNNRIWRN
Sbjct: 261 LLTNNRIWRN 270


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   LLTNNRIWRN 10
           LLTNNRIWRN
Sbjct: 261 LLTNNRIWRN 270


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   LLTNNRIWRN 10
           LLTNNRIWRN
Sbjct: 261 LLTNNRIWRN 270


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   LLTNNRIWRN 10
           LLTNNRIWRN
Sbjct: 261 LLTNNRIWRN 270


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   LLTNNRIWRN 10
           +LTNNRIWRN
Sbjct: 261 MLTNNRIWRN 270


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   LLTNNRIWRN 10
           +LTNNRIWRN
Sbjct: 261 MLTNNRIWRN 270


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   LLTNNRIWRN 10
           +LTNNRIWRN
Sbjct: 261 MLTNNRIWRN 270


>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC

Query: 1   LLTNNRIWR 9
           LLTNNRIW+
Sbjct: 195 LLTNNRIWK 203


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   LLTNNRIWR 9
           LLTNNRIW+
Sbjct: 214 LLTNNRIWK 222


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   LLTNNRIWR 9
           LLTNNRIW+
Sbjct: 196 LLTNNRIWK 204


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   LLTNNRIWR 9
           +LTNNRIW+
Sbjct: 196 MLTNNRIWK 204


>sp|NUOD2_SOLUE|NADH-QUINONE oxidoreductase subunit D 2|Solibacter usitatus (strain Ellin6076)

Query: 1   LLTNNRIW 8
           LLTNNRIW
Sbjct: 193 LLTNNRIW 200


>sp|NUOD1_SOLUE|NADH-QUINONE oxidoreductase subunit D 1|Solibacter usitatus (strain Ellin6076)

Query: 1   LLTNNRIW 8
           LLTNNRIW
Sbjct: 207 LLTNNRIW 214


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   LLTNNRIWR 9
           LLT NRIWR
Sbjct: 213 LLTENRIWR 221


>sp|NUOD_NITSB|NADH-QUINONE oxidoreductase subunit D|Nitratiruptor sp. (strain SB155-2)

Query: 1   LLTNNRIWR 9
           LLT NRIWR
Sbjct: 206 LLTENRIWR 214




54|Sequence|266|275|RIWRNRTIDI

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   RIWRNRTIDI 10
           RIWRNRTIDI
Sbjct: 266 RIWRNRTIDI 275


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   RIWRNRTIDI 10
           RIWRNRTIDI
Sbjct: 266 RIWRNRTIDI 275


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   RIWRNRTIDI 10
           RIWRNRTIDI
Sbjct: 266 RIWRNRTIDI 275


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   RIWRNRTIDI 10
           RIWRNRTIDI
Sbjct: 266 RIWRNRTIDI 275


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   RIWRNRTIDI 10
           RIWRNRT+DI
Sbjct: 266 RIWRNRTVDI 275


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   RIWRNRTIDI 10
           RIWRNRT+DI
Sbjct: 266 RIWRNRTVDI 275


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   RIWRNRTIDI 10
           RIWRNRT+DI
Sbjct: 266 RIWRNRTVDI 275


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   RIWRNRTIDI 10
           RIW+ RT+DI
Sbjct: 218 RIWKQRTVDI 227


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   RIWRNRTIDI 10
           RIW+ RT+DI
Sbjct: 199 RIWKQRTVDI 208


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   RIWRNRTIDI 10
           RIW+ RT+DI
Sbjct: 199 RIWKQRTVDI 208


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   RIWRNRTIDI 10
           RIW+ RT+DI
Sbjct: 218 RIWKQRTVDI 227


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   RIWRNRTIDI 10
           RIW+ RTIDI
Sbjct: 285 RIWKARTIDI 294


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   RIWRNRTIDI 10
           RIW+ RT+D+
Sbjct: 236 RIWKQRTVDV 245


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   RIWRNRTIDI 10
           RIW+ RT+D+
Sbjct: 236 RIWKQRTVDV 245


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   RIWRNRTIDI 10
           RIW+ RT+D+
Sbjct: 236 RIWKQRTVDV 245


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   RIWRNRTIDI 10
           RIW+ RT+D+
Sbjct: 236 RIWKQRTVDV 245


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   RIWRNRTIDI 10
           RIW+ RT+D+
Sbjct: 236 RIWKQRTVDV 245


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   RIWRNRTIDI 10
           RIW+ RT+D+
Sbjct: 236 RIWKQRTVDV 245


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 1   RIWRNRTIDI 10
           RIW+ RT+D+
Sbjct: 236 RIWKQRTVDV 245


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1   RIWRNRTIDI 10
           RIW+ RT+D+
Sbjct: 236 RIWKQRTVDV 245


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   RIWRNRTIDI 10
           R+W+ RT+DI
Sbjct: 218 RLWKQRTVDI 227


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   RIWRNRTIDI 10
           R+W+ RT+DI
Sbjct: 218 RLWKQRTVDI 227


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   RIWRNRTIDI 10
           R+W+ RT+DI
Sbjct: 218 RLWKQRTVDI 227


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1   RIWRNRTIDI 10
           R+W+ RT+DI
Sbjct: 218 RLWKQRTVDI 227


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. mediasiatica

Query: 1   RIWRNRTIDI 10
           R+W+ RT+DI
Sbjct: 218 RLWKQRTVDI 227


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   RIWRNRTIDI 10
           R+W+ RT+DI
Sbjct: 218 RLWKQRTVDI 227


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   RIWRNRTIDI 10
           R+W+ RT+DI
Sbjct: 218 RLWKQRTVDI 227


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   RIWRNRTIDI 10
           R+W+ RT+DI
Sbjct: 218 RLWKQRTVDI 227


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1   RIWRNRTIDI 10
           R+W+ RT+DI
Sbjct: 218 RLWKQRTVDI 227


>sp|PIP2_YEAST|PEROXISOME proliferation transcriptional regulator|Saccharomyces cerevisiae

Query: 1  RIWRNRTIDI 10
          R WRN+T+D+
Sbjct: 79 RYWRNKTVDL 88


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1   RIWRNRTIDI 10
           RIW+ RT+DI
Sbjct: 218 RIWKQRTVDI 227


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp. pneumophila

Query: 1   RIWRNRTIDI 10
           RIW+ RT+DI
Sbjct: 218 RIWKQRTVDI 227


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1   RIWRNRTIDI 10
           RIW+ RT+DI
Sbjct: 218 RIWKQRTVDI 227


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1   RIWRNRTIDI 10
           RIW+ RT+DI
Sbjct: 218 RIWKQRTVDI 227




55|Sequence|271|280|RTIDIGVVTA

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   RTIDIGVVTA 10
           RTIDIGVVTA
Sbjct: 271 RTIDIGVVTA 280


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   RTIDIGVVTA 10
           RTIDIGVVTA
Sbjct: 271 RTIDIGVVTA 280


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   RTIDIGVVTA 10
           RTIDIGVVTA
Sbjct: 271 RTIDIGVVTA 280


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   RTIDIGVVTA 10
           RTIDIGVVTA
Sbjct: 271 RTIDIGVVTA 280


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1   RTIDIGVVTA 10
           RT+DIGVVTA
Sbjct: 223 RTVDIGVVTA 232


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   RTIDIGVVTA 10
           RT+DIGVVTA
Sbjct: 271 RTVDIGVVTA 280


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   RTIDIGVVTA 10
           RT+DIG+VTA
Sbjct: 271 RTVDIGIVTA 280




56|Sequence|276|285|GVVTAEEALN

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   GVVTAEEALN 10
           GVVTAEEALN
Sbjct: 276 GVVTAEEALN 285


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   GVVTAEEALN 10
           GVVTAEEALN
Sbjct: 276 GVVTAEEALN 285


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   GVVTAEEALN 10
           GVVTAEEALN
Sbjct: 276 GVVTAEEALN 285


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   GVVTAEEALN 10
           GVVTAEEALN
Sbjct: 276 GVVTAEEALN 285


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   GVVTAEEALN 10
           GVVTAE+ALN
Sbjct: 276 GVVTAEDALN 285


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   GVVTAEEALN 10
           G+VTAE+ALN
Sbjct: 276 GIVTAEDALN 285




57|Sequence|281|290|EEALNYGFSG

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   EEALNYGFSG 10
           EEALNYGFSG
Sbjct: 281 EEALNYGFSG 290


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   EEALNYGFSG 10
           EEALNYGFSG
Sbjct: 281 EEALNYGFSG 290


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   EEALNYGFSG 10
           EEALNYGFSG
Sbjct: 281 EEALNYGFSG 290


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   EEALNYGFSG 10
           EEALNYGFSG
Sbjct: 281 EEALNYGFSG 290


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   EEALNYGFSG 10
           E+ALNYGFSG
Sbjct: 281 EDALNYGFSG 290


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   EEALNYGFSG 10
           E+ALNYGFSG
Sbjct: 281 EDALNYGFSG 290


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   EEALNYGFSG 10
           E+ALNYGFSG
Sbjct: 281 EDALNYGFSG 290


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1   EEALNYGFSG 10
           EEALNYGF+G
Sbjct: 224 EEALNYGFTG 233


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1   EEALNYGFSG 10
           EEALNYGF+G
Sbjct: 224 EEALNYGFTG 233


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   EEALNYGFSG 10
           EEAL++GFSG
Sbjct: 214 EEALDWGFSG 223


>sp|NUOD2_CYTH3|NADH-QUINONE oxidoreductase subunit D 2|Cytophaga hutchinsonii (strain ATCC

Query: 1   EEALNYGFSG 10
           E ALNYGF+G
Sbjct: 208 ERALNYGFTG 217


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   EEALNYGFSG 10
           EEAL++GFSG
Sbjct: 219 EEALSHGFSG 228




58|Sequence|286|295|YGFSGVMLRG

>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   YGFSGVMLRG 10
           YGFSGVMLRG
Sbjct: 286 YGFSGVMLRG 295


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   YGFSGVMLRG 10
           YGFSGVMLRG
Sbjct: 286 YGFSGVMLRG 295


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   YGFSGVMLRG 10
           YGFSGVMLRG
Sbjct: 286 YGFSGVMLRG 295


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   YGFSGVMLRG 10
           YGFSGVMLRG
Sbjct: 286 YGFSGVMLRG 295


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   YGFSGVMLRG 10
           YGFSGVMLRG
Sbjct: 286 YGFSGVMLRG 295


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   YGFSGVMLRG 10
           YGFSGVMLRG
Sbjct: 286 YGFSGVMLRG 295


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   YGFSGVMLRG 10
           YGFSGVMLRG
Sbjct: 286 YGFSGVMLRG 295


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040) (Silicibacter

Query: 1   YGFSGVMLRG 10
           YGFSGVM+RG
Sbjct: 225 YGFSGVMVRG 234


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1   YGFSGVMLRG 10
           YGFSGVM+RG
Sbjct: 227 YGFSGVMVRG 236


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   YGFSGVMLRG 10
           +GFSGVMLRG
Sbjct: 219 WGFSGVMLRG 228


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   YGFSGVMLRG 10
           +GFSGVMLRG
Sbjct: 219 WGFSGVMLRG 228


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   YGFSGVMLRG 10
           +GFSGVMLRG
Sbjct: 217 WGFSGVMLRG 226


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1   YGFSGVMLRG 10
           YGFSGVM+RG
Sbjct: 227 YGFSGVMVRG 236


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   YGFSGVMLRG 10
           +GFSGVMLRG
Sbjct: 217 WGFSGVMLRG 226


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1   YGFSGVMLRG 10
           +GFSGVMLRG
Sbjct: 215 WGFSGVMLRG 224


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   YGFSGVMLRG 10
           +GFSGVMLRG
Sbjct: 224 HGFSGVMLRG 233


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   YGFSGVMLRG 10
           +GFSGVMLRG
Sbjct: 219 WGFSGVMLRG 228


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC 19089

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 219 WGFSGVMVRG 228


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 237 WGFSGVMVRG 246


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 305 WGFSGVMVRG 314


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain JCM

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 217 WGFSGVMVRG 226


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC BAA-705

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC 49405

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 224 WGFSGVMVRG 233


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   YGFSGVMLRG 10
           +GFSGV+LRG
Sbjct: 221 WGFSGVLLRG 230


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 232 WGFSGVMVRG 241


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17025

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 224 WGFSGVMVRG 233


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17029

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 224 WGFSGVMVRG 233


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 220 WGFSGVMVRG 229


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17023

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 226 WGFSGVMVRG 235


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   YGFSGVMLRG 10
           Y FSGVM+RG
Sbjct: 214 YSFSGVMIRG 223


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB5)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 235 WGFSGVMVRG 244


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 234 WGFSGVMVRG 243


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 221 WGFSGVMVRG 230


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain TIE-1)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 221 WGFSGVMVRG 230


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisA53)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 221 WGFSGVMVRG 230


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 221 WGFSGVMVRG 230


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 217 WGFSGVMVRG 226


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 217 WGFSGVMVRG 226


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   YGFSGVMLRG 10
           +GFSGVMLRG
Sbjct: 221 WGFSGVMLRG 230


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 223 WGFSGVMVRG 232


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB18)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 221 WGFSGVMVRG 230


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain DS-1

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 212 WGFSGVMVRG 221


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 2   GFSGVMLRG 10
           GFSGVM+RG
Sbjct: 216 GFSGVMIRG 224


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 2   GFSGVMLRG 10
           GFSGVM+RG
Sbjct: 216 GFSGVMVRG 224


>sp|NUOD_BARBK|NADH-QUINONE oxidoreductase subunit D|Bartonella bacilliformis (strain ATCC

Query: 2   GFSGVMLRG 10
           GFSGVM+RG
Sbjct: 216 GFSGVMIRG 224


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 2   GFSGVMLRG 10
           GFSGVM+RG
Sbjct: 216 GFSGVMIRG 224


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 2   GFSGVMLRG 10
           GF+GVMLRG
Sbjct: 240 GFTGVMLRG 248


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 2   GFSGVMLRG 10
           GF+GVMLRG
Sbjct: 240 GFTGVMLRG 248


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 2   GFSGVMLRG 10
           GF+GVMLRG
Sbjct: 240 GFTGVMLRG 248


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 2   GFSGVMLRG 10
           GF+GVMLRG
Sbjct: 240 GFTGVMLRG 248


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 2   GFSGVMLRG 10
           GF+GVMLRG
Sbjct: 240 GFTGVMLRG 248


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 2   GFSGVMLRG 10
           GF+GVMLRG
Sbjct: 240 GFTGVMLRG 248


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG 29417

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 215 WGFSGVMVRG 224


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1   YGFSGVMLRG 10
           +GFSGVM+RG
Sbjct: 223 WGFSGVMVRG 232




59|Sequence|291|300|VMLRGSGIQW

>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   VMLRGSGIQW 10
           VMLRGSGIQW
Sbjct: 291 VMLRGSGIQW 300


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   VMLRGSGIQW 10
           VMLRGSGIQW
Sbjct: 291 VMLRGSGIQW 300


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   VMLRGSGIQW 10
           VMLRGSGIQW
Sbjct: 291 VMLRGSGIQW 300


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   VMLRGSGIQW 10
           VMLRGSGIQW
Sbjct: 291 VMLRGSGIQW 300


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   VMLRGSGIQW 10
           VMLRGSGIQW
Sbjct: 291 VMLRGSGIQW 300


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   VMLRGSGIQW 10
           VMLRGSGIQW
Sbjct: 291 VMLRGSGIQW 300


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   VMLRGSGIQW 10
           VMLRGSGIQW
Sbjct: 291 VMLRGSGIQW 300


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   VMLRGSGIQW 10
           VMLRGSG++W
Sbjct: 244 VMLRGSGVEW 253


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   VMLRGSGIQW 10
           VMLRGSG++W
Sbjct: 244 VMLRGSGVEW 253


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   VMLRGSGIQW 10
           VMLRGSG++W
Sbjct: 244 VMLRGSGVEW 253


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   VMLRGSGIQW 10
           VMLRGSG++W
Sbjct: 244 VMLRGSGVEW 253


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   VMLRGSGIQW 10
           VMLRGSG++W
Sbjct: 244 VMLRGSGVEW 253


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   VMLRGSGIQW 10
           VMLRGSG++W
Sbjct: 244 VMLRGSGVEW 253


>sp|NUOD_CHLL3|NADH-QUINONE oxidoreductase subunit D|Chlorobium luteolum (strain DSM 273

Query: 2   MLRGSGIQW 10
           MLRGSG+QW
Sbjct: 240 MLRGSGVQW 248


>sp|NUOD_CHLL2|NADH-QUINONE oxidoreductase subunit D|Chlorobium limicola (strain DSM 245

Query: 2   MLRGSGIQW 10
           MLRGSG+QW
Sbjct: 240 MLRGSGVQW 248


>sp|NUOD_CHLPM|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeovibrioides (strain DSM 265

Query: 2   MLRGSGIQW 10
           MLRGSG+QW
Sbjct: 245 MLRGSGVQW 253


>sp|NUOD_CHLPD|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeobacteroides (strain DSM

Query: 2   MLRGSGIQW 10
           MLRGSG+QW
Sbjct: 245 MLRGSGVQW 253


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   VMLRGSGIQW 10
           VMLRGSGI W
Sbjct: 224 VMLRGSGIAW 233


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   VMLRGSGIQW 10
           VMLRGSGI W
Sbjct: 224 VMLRGSGIAW 233


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   VMLRGSGIQW 10
           VMLRGSGI W
Sbjct: 229 VMLRGSGIAW 238


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1   VMLRGSGIQW 10
           VMLRGSGI W
Sbjct: 261 VMLRGSGIAW 270


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   VMLRGSGIQW 10
           VMLRGSGI W
Sbjct: 224 VMLRGSGIAW 233


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1   VMLRGSGIQW 10
           VMLRGSGI W
Sbjct: 261 VMLRGSGIAW 270


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1   VMLRGSGIQW 10
           VMLRGSGI W
Sbjct: 261 VMLRGSGIAW 270


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1   VMLRGSGIQW 10
           VMLRGSGI W
Sbjct: 220 VMLRGSGIPW 229


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1   VMLRGSGIQW 10
           VMLRGSGI W
Sbjct: 261 VMLRGSGIAW 270


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 262 MLRGSGIEW 270


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 262 MLRGSGIEW 270


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 262 MLRGSGIEW 270


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 262 MLRGSGIEW 270


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 262 MLRGSGIEW 270


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 262 MLRGSGIEW 270


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 244 MLRGSGIEW 252


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain LB400)

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 244 MLRGSGIEW 252


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain DSM

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 244 MLRGSGIEW 252


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 244 MLRGSGIEW 252


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 244 MLRGSGIEW 252


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 244 MLRGSGIEW 252


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 244 MLRGSGIEW 252


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 244 MLRGSGIEW 252


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 262 MLRGSGIEW 270


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 262 MLRGSGIEW 270


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 244 MLRGSGIEW 252


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain DSM

Query: 2   MLRGSGIQW 10
           MLRGSGI+W
Sbjct: 244 MLRGSGIEW 252


>sp|NUOD_WOLSU|NADH-QUINONE oxidoreductase subunit D|Wolinella succinogenes (strain ATCC 29543

Query: 1   VMLRGSGIQW 10
           V LRGSGIQW
Sbjct: 234 VALRGSGIQW 243


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1   VMLRGSGIQW 10
           VMLRGSG+ W
Sbjct: 261 VMLRGSGVAW 270


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   VMLRGSGIQW 10
           VMLRGSG+ W
Sbjct: 306 VMLRGSGVPW 315


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1   VMLRGSGIQW 10
           VMLRGSG+ W
Sbjct: 261 VMLRGSGVAW 270


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 244 MLRGSGVEW 252


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 244 MLRGSGVEW 252


>sp|NUOD_PROA2|NADH-QUINONE oxidoreductase subunit D|Prosthecochloris aestuarii (strain DSM 271

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 245 MLRGSGVEW 253


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 244 MLRGSGVEW 252


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 244 MLRGSGVEW 252


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 244 MLRGSGVEW 252


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 244 MLRGSGVEW 252


>sp|NUOD_CHLPB|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeobacteroides (strain BS1)

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 245 MLRGSGVEW 253


>sp|NUOD_CHLCH|NADH-QUINONE oxidoreductase subunit D|Chlorobium chlorochromatii (strain CaD3)

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 245 MLRGSGVEW 253


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   VMLRGSGIQW 10
           VMLRGSG+ W
Sbjct: 262 VMLRGSGVAW 271


>sp|NDHH_CHAGL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Chaetosphaeridium globosum

Query: 2   MLRGSGIQW 10
           MLRGSG+QW
Sbjct: 221 MLRGSGVQW 229


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC 19089

Query: 1   VMLRGSGIQW 10
           VM+RGSGI W
Sbjct: 224 VMVRGSGIAW 233


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1   VMLRGSGIQW 10
           VM+RGSGI W
Sbjct: 242 VMVRGSGIAW 251


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   VMLRGSGIQW 10
           VMLRGSGI+W
Sbjct: 226 VMLRGSGIRW 235


>sp|NUOD_PELPB|NADH-QUINONE oxidoreductase subunit D|Pelodictyon phaeoclathratiforme (strain

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 245 MLRGSGVKW 253


>sp|NUOD_CHLTE|NADH-QUINONE oxidoreductase subunit D|Chlorobaculum tepidum (strain ATCC 49652

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 245 MLRGSGVKW 253


>sp|NUOD_CHLP8|NADH-QUINONE oxidoreductase subunit D|Chlorobaculum parvum (strain DSM 263

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 245 MLRGSGVKW 253


>sp|NUOD2_CHLT3|NADH-QUINONE oxidoreductase subunit D 2|Chloroherpeton thalassium (strain ATCC

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 244 MLRGSGVKW 252


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1   VMLRGSGIQW 10
           VM+RGSGI W
Sbjct: 220 VMVRGSGIPW 229


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC BAA-705

Query: 1   VMLRGSGIQW 10
           VM+RGSGI W
Sbjct: 220 VMVRGSGIPW 229


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1   VMLRGSGIQW 10
           VM+RGSGI W
Sbjct: 220 VMVRGSGIPW 229


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   VMLRGSGIQW 10
           VMLRGSG+ W
Sbjct: 222 VMLRGSGVCW 231


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   VMLRGSGIQW 10
           VMLRGSG+ W
Sbjct: 222 VMLRGSGVCW 231


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1   VMLRGSGIQW 10
           VM+RGSGI W
Sbjct: 237 VMVRGSGIPW 246


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain EF01-2)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 218 MLRGSGIAW 226


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 220 MLRGSGIAW 228


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 220 MLRGSGIAW 228


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 218 MLRGSGIAW 226


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 220 MLRGSGIAW 228


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 220 MLRGSGIAW 228


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 220 MLRGSGIAW 228


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 220 MLRGSGIAW 228


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 220 MLRGSGIAW 228


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 220 MLRGSGIAW 228


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 220 MLRGSGIAW 228


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM 17343

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP 134

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   VMLRGSGIQW 10
           V+LRGSGI W
Sbjct: 228 VLLRGSGIAW 237


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp. pneumophila

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 2   MLRGSGIQW 10
           MLRGSGI W
Sbjct: 244 MLRGSGIAW 252


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   VMLRGSGIQW 10
           VM+RGSG+ W
Sbjct: 219 VMIRGSGVPW 228


>sp|NUOD_SULNB|NADH-QUINONE oxidoreductase subunit D|Sulfurovum sp. (strain NBC37-1)

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 236 MLRGSGVNW 244


>sp|NUOD_HELHP|NADH-QUINONE oxidoreductase subunit D|Helicobacter hepaticus (strain ATCC 51449

Query: 1   VMLRGSGIQW 10
           +M RGSGI+W
Sbjct: 235 IMARGSGIKW 244


>sp|NUOD_CAMC5|NADH-QUINONE oxidoreductase subunit D|Campylobacter curvus (strain 525.92)

Query: 1   VMLRGSGIQW 10
           VMLR SG++W
Sbjct: 235 VMLRASGVKW 244


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   VMLRGSGIQW 10
           V+LRGSG+ W
Sbjct: 226 VLLRGSGVAW 235


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 244 MLRGSGVAW 252


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 244 MLRGSGVAW 252


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 244 MLRGSGVAW 252


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 244 MLRGSGVAW 252


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 244 MLRGSGVAW 252


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 244 MLRGSGVAW 252


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. mediasiatica

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 244 MLRGSGVAW 252


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 244 MLRGSGVAW 252


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 244 MLRGSGVAW 252


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 244 MLRGSGVAW 252


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 244 MLRGSGVAW 252


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 245 MLRGSGVAW 253


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 245 MLRGSGVAW 253


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 245 MLRGSGVAW 253


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 245 MLRGSGVAW 253


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 245 MLRGSGVAW 253


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 244 MLRGSGVAW 252


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 244 MLRGSGVAW 252


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040) (Silicibacter

Query: 1   VMLRGSGIQW 10
           VM+RGSG+ W
Sbjct: 230 VMVRGSGLAW 239


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1   VMLRGSGIQW 10
           VM+RGSG+ W
Sbjct: 232 VMVRGSGLAW 241


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1   VMLRGSGIQW 10
           VM+RGSG+ W
Sbjct: 232 VMVRGSGLAW 241


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1   VMLRGSGIQW 10
           VM+RGSG+ W
Sbjct: 238 VMVRGSGLAW 247


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17025

Query: 1   VMLRGSGIQW 10
           VM+RGSG+ W
Sbjct: 229 VMVRGSGLAW 238


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   VMLRGSGIQW 10
           VM+RGSG+ W
Sbjct: 226 VMVRGSGLAW 235


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 2   MLRGSGIQW 10
           MLRGSG+ W
Sbjct: 244 MLRGSGVAW 252


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1   VMLRGSGIQW 10
           VM+RGSG+ W
Sbjct: 231 VMVRGSGLAW 240


>sp|NDHH_SYNP6|NAD(P)H-QUINONE oxidoreductase subunit H|Synechococcus sp. (strain ATCC 27144

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 224 MLRGSGVKW 232


>sp|NDHH_SYNE7|NAD(P)H-QUINONE oxidoreductase subunit H|Synechococcus elongatus (strain ATCC 33912

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 224 MLRGSGVKW 232


>sp|NDHH_SYNY3|NAD(P)H-QUINONE oxidoreductase subunit H|Synechocystis sp. (strain ATCC 27184

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 224 MLRGSGVKW 232


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1   VMLRGSGIQW 10
           VM+RGSG+ W
Sbjct: 217 VMVRGSGLAW 226


>sp|NDHH_VITVI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Vitis vinifera (Grape)

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_CYCTA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Cycas taitungensis (Prince

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_ACAM1|NAD(P)H-QUINONE oxidoreductase subunit H|Acaryochloris marina (strain MBIC 11017)

Query: 2   MLRGSGIQW 10
           MLRGSG++W
Sbjct: 224 MLRGSGVKW 232


>sp|NDHH_NYMAL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nymphaea alba (White

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_NUPAD|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nuphar advena (Common

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_GUIAB|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Guizotia abyssinica (Niger)

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_LACSA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Lactuca sativa (Garden

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_CRYJA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Cryptomeria japonica

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd 1222)

Query: 1   VMLRGSGIQW 10
           VM+RGSG+ W
Sbjct: 238 VMVRGSGLAW 247


>sp|NDHH_PHAVU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Phaseolus vulgaris (Kidney

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_NANDO|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nandina domestica (Heavenly

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_DRIGR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Drimys granadensis

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_COFAR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Coffea arabica (Arabian

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_SOYBN|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Glycine max (Soybean)

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_EUCGG|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Eucalyptus globulus subsp.

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_MORIN|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Morus indica (Mulberry)

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 1   VMLRGSGIQW 10
           VM+RGSG+ W
Sbjct: 238 VMVRGSGLAW 247


>sp|NDHH_LOTJA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Lotus japonicus (Lotus

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_JASNU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Jasminum nudiflorum (Winter

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_SPIOL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Spinacia oleracea (Spinach)

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_PIPCE|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Piper cenocladum (Ant

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_HUPLU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Huperzia lucidula (Shining

Query: 2   MLRGSGIQW 10
           MLR SG+QW
Sbjct: 223 MLRASGVQW 231


>sp|NDHH_LOLPR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Lolium perenne (Perennial

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_FAGEA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Fagopyrum esculentum subsp.

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_HORVU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Hordeum vulgare (Barley)

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_AGRST|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Agrostis stolonifera

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_MAIZE|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Zea mays (Maize)

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_FESAR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Festuca arundinacea (Tall

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_WHEAT|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Triticum aestivum (Wheat)

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_SORBI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Sorghum bicolor (Sorghum)

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_SACOF|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Saccharum officinarum

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_SACHY|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Saccharum hybrid

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_LIRTU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Liriodendron tulipifera

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_RANMC|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Ranunculus macranthus

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_ORYSJ|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza sativa subsp.

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_ORYSI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza sativa subsp. indica

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_ORYSA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza sativa (Rice)

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_ORYNI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza nivara (Indian wild

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_PANGI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Panax ginseng (Korean

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_BUXMI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Buxus microphylla

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_PLAOC|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Platanus occidentalis

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_ILLOL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Illicium oligandrum (Star

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_AETGR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Aethionema grandiflorum

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_CALFG|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Calycanthus floridus var.

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_TRISU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Trifolium subterraneum

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_NOSP7|NAD(P)H-QUINONE oxidoreductase subunit H|Nostoc punctiforme (strain ATCC 29133

Query: 2   MLRGSGIQW 10
           MLR SG+QW
Sbjct: 224 MLRASGVQW 232


>sp|NDHH_DAUCA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Daucus carota (Wild carrot)

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_MARPO|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Marchantia polymorpha

Query: 2   MLRGSGIQW 10
           MLR SG+QW
Sbjct: 222 MLRASGVQW 230


>sp|NDHH_CICAR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Cicer arietinum (Chickpea)

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_AETCO|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Aethionema cordifolium

Query: 2   MLRGSGIQW 10
           MLR SGIQW
Sbjct: 223 MLRASGIQW 231


>sp|NDHH_ANTAG|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Anthoceros angustus

Query: 1   VMLRGSGIQW 10
           +MLR SG+QW
Sbjct: 222 LMLRASGVQW 231


>sp|NDHH_MESVI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Mesostigma viride (Green

Query: 2   MLRGSGIQW 10
           MLR SG+QW
Sbjct: 221 MLRASGVQW 229




60|Sequence|296|305|SGIQWDLRKT

>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   SGIQWDLRKT 10
           SGIQWDLRKT
Sbjct: 296 SGIQWDLRKT 305


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   SGIQWDLRKT 10
           SGIQWDLRKT
Sbjct: 296 SGIQWDLRKT 305


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   SGIQWDLRKT 10
           SGIQWDLRKT
Sbjct: 296 SGIQWDLRKT 305


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   SGIQWDLRKT 10
           SGIQWDLRKT
Sbjct: 296 SGIQWDLRKT 305


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   SGIQWDLRKT 10
           SGIQWDLRKT
Sbjct: 296 SGIQWDLRKT 305


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   SGIQWDLRKT 10
           SGIQWDLRKT
Sbjct: 296 SGIQWDLRKT 305


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   SGIQWDLRKT 10
           SGIQWDLRKT
Sbjct: 296 SGIQWDLRKT 305


>sp|NUOD_WOLSU|NADH-QUINONE oxidoreductase subunit D|Wolinella succinogenes (strain ATCC 29543

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 239 SGIQWDLRK 247


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain EF01-2)

Query: 1   SGIQWDLRKT 10
           SGI WDLRKT
Sbjct: 248 SGIAWDLRKT 257


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   SGIQWDLRKT 10
           SGI WDLRKT
Sbjct: 248 SGIAWDLRKT 257


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   SGIQWDLRKT 10
           SGI WDLRKT
Sbjct: 248 SGIAWDLRKT 257


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   SGIQWDLRKT 10
           SGI WDLRKT
Sbjct: 248 SGIAWDLRKT 257


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   SGIQWDLRKT 10
           SGI WDLRKT
Sbjct: 229 SGIAWDLRKT 238


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   SGIQWDLRKT 10
           SGI WDLRKT
Sbjct: 233 SGIAWDLRKT 242


>sp|NDHH_VITVI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Vitis vinifera (Grape)

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NUOD1_HERA2|NADH-QUINONE oxidoreductase subunit D 1|Herpetosiphon aurantiacus (strain ATCC

Query: 1   SGIQWDLRKT 10
           SG+ WDLRKT
Sbjct: 252 SGVDWDLRKT 261


>sp|NDHH_NYMAL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nymphaea alba (White

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_NUPAD|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nuphar advena (Common

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_PHAVU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Phaseolus vulgaris (Kidney

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_LACSA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Lactuca sativa (Garden

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_GUIAB|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Guizotia abyssinica (Niger)

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   SGIQWDLRKT 10
           SG+ WDLRKT
Sbjct: 248 SGVAWDLRKT 257


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   SGIQWDLRKT 10
           SG+ WDLRKT
Sbjct: 248 SGVAWDLRKT 257


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   SGIQWDLRKT 10
           SG+ WDLRKT
Sbjct: 248 SGVAWDLRKT 257


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1   SGIQWDLRKT 10
           SG+ WDLRKT
Sbjct: 248 SGVAWDLRKT 257


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. mediasiatica

Query: 1   SGIQWDLRKT 10
           SG+ WDLRKT
Sbjct: 248 SGVAWDLRKT 257


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   SGIQWDLRKT 10
           SG+ WDLRKT
Sbjct: 248 SGVAWDLRKT 257


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   SGIQWDLRKT 10
           SG+ WDLRKT
Sbjct: 248 SGVAWDLRKT 257


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   SGIQWDLRKT 10
           SG+ WDLRKT
Sbjct: 248 SGVAWDLRKT 257


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1   SGIQWDLRKT 10
           SG+ WDLRKT
Sbjct: 249 SGVAWDLRKT 258


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1   SGIQWDLRKT 10
           SG+ WDLRKT
Sbjct: 249 SGVAWDLRKT 258


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1   SGIQWDLRKT 10
           SG+ WDLRKT
Sbjct: 249 SGVAWDLRKT 258


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1   SGIQWDLRKT 10
           SG+ WDLRKT
Sbjct: 249 SGVAWDLRKT 258


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   SGIQWDLRKT 10
           SG+ WDLRKT
Sbjct: 231 SGVAWDLRKT 240


>sp|NDHH_MORIN|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Morus indica (Mulberry)

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_SPIOL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Spinacia oleracea (Spinach)

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_SOYBN|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Glycine max (Soybean)

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_TRISU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Trifolium subterraneum

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_EUCGG|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Eucalyptus globulus subsp.

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_COFAR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Coffea arabica (Arabian

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_CALFG|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Calycanthus floridus var.

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_MAIZE|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Zea mays (Maize)

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_LIRTU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Liriodendron tulipifera

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_FAGEA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Fagopyrum esculentum subsp.

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_DRIGR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Drimys granadensis

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_CYCTA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Cycas taitungensis (Prince

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_CRYJA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Cryptomeria japonica

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_AGRST|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Agrostis stolonifera

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_WHEAT|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Triticum aestivum (Wheat)

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_AETCO|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Aethionema cordifolium

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   SGIQWDLRKT 10
           SG++WD+RKT
Sbjct: 249 SGVEWDVRKT 258


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   SGIQWDLRKT 10
           SG++WD+RKT
Sbjct: 249 SGVEWDVRKT 258


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   SGIQWDLRKT 10
           SG++WD+RKT
Sbjct: 249 SGVEWDVRKT 258


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   SGIQWDLRKT 10
           SG++WD+RKT
Sbjct: 249 SGVEWDVRKT 258


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   SGIQWDLRKT 10
           SG++WD+RKT
Sbjct: 249 SGVEWDVRKT 258


>sp|NDHH_HORVU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Hordeum vulgare (Barley)

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_CICAR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Cicer arietinum (Chickpea)

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_SORBI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Sorghum bicolor (Sorghum)

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_SACOF|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Saccharum officinarum

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_SACHY|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Saccharum hybrid

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_PLAOC|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Platanus occidentalis

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 266 SGIEWDLRK 274


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 266 SGIEWDLRK 274


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 266 SGIEWDLRK 274


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 266 SGIEWDLRK 274


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 266 SGIEWDLRK 274


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 266 SGIEWDLRK 274


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 266 SGIEWDLRK 274


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 266 SGIEWDLRK 274


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain LB400)

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 248 SGIEWDLRK 256


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain DSM

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 248 SGIEWDLRK 256


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 248 SGIEWDLRK 256


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 248 SGIEWDLRK 256


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 248 SGIEWDLRK 256


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 248 SGIEWDLRK 256


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 248 SGIEWDLRK 256


>sp|NDHH_PIPCE|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Piper cenocladum (Ant

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_ILLOL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Illicium oligandrum (Star

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_ORYSJ|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza sativa subsp.

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_ORYSI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza sativa subsp. indica

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_ORYSA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza sativa (Rice)

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_ORYNI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza nivara (Indian wild

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_BUXMI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Buxus microphylla

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_FESAR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Festuca arundinacea (Tall

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_AETGR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Aethionema grandiflorum

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_LOLPR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Lolium perenne (Perennial

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 248 SGIEWDLRK 256


>sp|NDHH_JASNU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Jasminum nudiflorum (Winter

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_NANDO|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nandina domestica (Heavenly

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain DSM

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 248 SGIEWDLRK 256


>sp|NDHH_CHAGL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Chaetosphaeridium globosum

Query: 1   SGIQWDLRK 9
           SG+QWDLRK
Sbjct: 225 SGVQWDLRK 233


>sp|NUOD_CHLPD|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeobacteroides (strain DSM

Query: 1   SGIQWDLRK 9
           SG+QWDLR+
Sbjct: 249 SGVQWDLRR 257


>sp|NUOD_CHLL3|NADH-QUINONE oxidoreductase subunit D|Chlorobium luteolum (strain DSM 273

Query: 1   SGIQWDLRK 9
           SG+QWDLR+
Sbjct: 244 SGVQWDLRR 252


>sp|NUOD_CHLL2|NADH-QUINONE oxidoreductase subunit D|Chlorobium limicola (strain DSM 245

Query: 1   SGIQWDLRK 9
           SG+QWDLR+
Sbjct: 244 SGVQWDLRR 252


>sp|NDHH_RANMC|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Ranunculus macranthus

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_PANGI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Panax ginseng (Korean

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDHH_NOSP7|NAD(P)H-QUINONE oxidoreductase subunit H|Nostoc punctiforme (strain ATCC 29133

Query: 1   SGIQWDLRK 9
           SG+QWDLRK
Sbjct: 228 SGVQWDLRK 236


>sp|NDHH_HUPLU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Huperzia lucidula (Shining

Query: 1   SGIQWDLRK 9
           SG+QWDLRK
Sbjct: 227 SGVQWDLRK 235


>sp|NDHH_MARPO|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Marchantia polymorpha

Query: 1   SGIQWDLRK 9
           SG+QWDLRK
Sbjct: 226 SGVQWDLRK 234


>sp|NDHH_ZYGCR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Zygnema circumcarinatum

Query: 1   SGIQWDLRK 9
           SG+QWDLRK
Sbjct: 225 SGVQWDLRK 233


>sp|NDHH_DAUCA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Daucus carota (Wild carrot)

Query: 1   SGIQWDLRK 9
           SGIQWDLRK
Sbjct: 227 SGIQWDLRK 235


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 231 SGIRWDLRK 239


>sp|NDHH_ADICA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Adiantum capillus-veneris

Query: 1   SGIQWDLRK 9
           SG+QWDLRK
Sbjct: 227 SGVQWDLRK 235


>sp|NDHH_ANTAG|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Anthoceros angustus

Query: 1   SGIQWDLRK 9
           SG+QWDLRK
Sbjct: 227 SGVQWDLRK 235


>sp|NDHH_PSINU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Psilotum nudum (Whisk fern)

Query: 1   SGIQWDLRK 9
           SG+QWDLRK
Sbjct: 227 SGVQWDLRK 235


>sp|NDHH_MESVI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Mesostigma viride (Green

Query: 1   SGIQWDLRK 9
           SG+QWDLRK
Sbjct: 225 SGVQWDLRK 233


>sp|NDHH_STAPU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Staurastrum punctulatum

Query: 1   SGIQWDLRK 9
           SG+QWDLRK
Sbjct: 227 SGVQWDLRK 235


>sp|NDHH_PHYPA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Physcomitrium patens

Query: 1   SGIQWDLRK 9
           SG+QWDLRK
Sbjct: 225 SGVQWDLRK 233


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 238 SGIAWDLRKS 247


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 222 SGIAWDLRKS 231


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 224 SGIAWDLRKS 233


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 224 SGIAWDLRKS 233


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 222 SGIAWDLRKS 231


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 224 SGIAWDLRKS 233


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 224 SGIAWDLRKS 233


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 224 SGIAWDLRKS 233


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 224 SGIAWDLRKS 233


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 224 SGIAWDLRKS 233


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 224 SGIAWDLRKS 233


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 224 SGIAWDLRKS 233


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 225 SGIAWDLRKS 234


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 229 SGIAWDLRKS 238


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 229 SGIAWDLRKS 238


>sp|NDHH_MANES|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Manihot esculenta (Cassava)

Query: 1   SGIQWDLRK 9
           SG+QWDLRK
Sbjct: 227 SGVQWDLRK 235


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 248 SGVEWDLRK 256


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 248 SGVEWDLRK 256


>sp|NUOD_PROA2|NADH-QUINONE oxidoreductase subunit D|Prosthecochloris aestuarii (strain DSM 271

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 249 SGVEWDLRK 257


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 248 SGVEWDLRK 256


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 248 SGVEWDLRK 256


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 248 SGVEWDLRK 256


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 248 SGVEWDLRK 256


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 248 SGVEWDLRK 256


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 248 SGVEWDLRK 256


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 248 SGVEWDLRK 256


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 248 SGVEWDLRK 256


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 248 SGVEWDLRK 256


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 236 SGIPWDLRKS 245


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC BAA-705

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 225 SGIPWDLRKS 234


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 225 SGIPWDLRKS 234


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1   SGIQWDLRKT 10
           SG+ WDLR+T
Sbjct: 248 SGVAWDLRRT 257


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1   SGIQWDLRKT 10
           SGI WDLRK+
Sbjct: 233 SGIPWDLRKS 242


>sp|NUOD2_ROSS1|NADH-QUINONE oxidoreductase subunit D 2|Roseiflexus sp. (strain RS-1)

Query: 1   SGIQWDLRKT 10
           +G+ WDLRKT
Sbjct: 247 TGVAWDLRKT 256


>sp|NUOD1_ROSCS|NADH-QUINONE oxidoreductase subunit D 1|Roseiflexus castenholzii (strain DSM

Query: 1   SGIQWDLRKT 10
           +G+ WDLRKT
Sbjct: 247 TGVAWDLRKT 256


>sp|NDHH_LOTJA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Lotus japonicus (Lotus

Query: 1   SGIQWDLRK 9
           SGIQWDLR+
Sbjct: 227 SGIQWDLRQ 235


>sp|NDHH_CITSI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Citrus sinensis (Sweet

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 229 SGIEWDLRK 237


>sp|NDHH_PELHO|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Pelargonium hortorum

Query: 1   SGIQWDLRK 9
           SG+QWDLRK
Sbjct: 227 SGMQWDLRK 235


>sp|NDHH_HELAN|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Helianthus annuus (Common

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM 17343

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP 134

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain K96243)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 266 SGIAWDLRK 274


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 234 SGIAWDLRK 242


>sp|NUOD_CHLPM|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeovibrioides (strain DSM 265

Query: 1   SGIQWDLRK 9
           SG+QWD+R+
Sbjct: 249 SGVQWDIRR 257


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1   SGIQWDLRKT 10
           SG+ WDLRK+
Sbjct: 248 SGVAWDLRKS 257


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 266 SGIAWDLRK 274


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 266 SGIAWDLRK 274


>sp|NDHH_CARPA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Carica papaya (Papaya)

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 266 SGIAWDLRK 274


>sp|NDHH_ACOCL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Acorus calamus (Sweet flag)

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NDHH_ACOCI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Acorus calamus var.

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NUOD_HELHP|NADH-QUINONE oxidoreductase subunit D|Helicobacter hepaticus (strain ATCC 51449

Query: 1   SGIQWDLRK 9
           SGI+WD+RK
Sbjct: 240 SGIKWDIRK 248


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1   SGIQWDLRK 9
           SGI+WD+RK
Sbjct: 248 SGIEWDVRK 256


>sp|NDHH_IPOPU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Ipomoea purpurea (Common

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 225 SGIPWDLRK 233


>sp|NDHH_OENPA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oenothera parviflora

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NDHH_OENAR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oenothera argillicola

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NUOD2_SORC5|NADH-QUINONE oxidoreductase subunit D 2|Sorangium cellulosum (strain So ce56)

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 239 SGVKWDLRK 247


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   SGIQWDLRKT 10
           SG+ WDLRK+
Sbjct: 224 SGVPWDLRKS 233


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   SGIQWDLRKT 10
           SG+ WDLRK+
Sbjct: 221 SGVPWDLRKS 230


>sp|NDHH_OENGL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oenothera glazioviana

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NDHH_OENEH|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oenothera elata subsp.

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NDHH_OENBI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oenothera biennis (German

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NDHH_NICTO|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nicotiana tomentosiformis

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NDHH_GOSBA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Gossypium barbadense (Sea

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIKWDLRK 235


>sp|NDHH_GOSHI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Gossypium hirsutum (Upland

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIKWDLRK 235


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp. pneumophila

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NDHH_TOBAC|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nicotiana tabacum (Common

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NDHH_SOLTU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Solanum tuberosum (Potato)

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NDHH_SOLLC|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Solanum lycopersicum

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NDHH_SOLBU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Solanum bulbocastanum (Wild

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NDHH_NICSY|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nicotiana sylvestris (Wood

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NDHH_ATRBE|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Atropa belladonna

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIEWDLRK 235


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 248 SGIAWDLRK 256


>sp|NDHH_THEVB|NAD(P)H-QUINONE oxidoreductase subunit H|Thermosynechococcus vestitus (strain

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 228 SGVKWDLRK 236


>sp|NUOD_CHLPB|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeobacteroides (strain BS1)

Query: 1   SGIQWDLRK 9
           SG++WDLR+
Sbjct: 249 SGVEWDLRR 257


>sp|NUOD_CHLCH|NADH-QUINONE oxidoreductase subunit D|Chlorobium chlorochromatii (strain CaD3)

Query: 1   SGIQWDLRK 9
           SG++WDLR+
Sbjct: 249 SGVEWDLRR 257


>sp|NUOD1_SALTO|NADH-QUINONE oxidoreductase subunit D 1|Salinispora tropica (strain ATCC BAA-916

Query: 1   SGIQWDLRKT 10
           +G+ WDLRKT
Sbjct: 258 AGLAWDLRKT 267


>sp|NDHH_CHLSC|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Chloranthus spicatus

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 229 SGIRWDLRK 237


>sp|NDHH_BRADI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Brachypodium distachyon

Query: 1   SGIQWDLRK 9
           SGI+WDLRK
Sbjct: 227 SGIRWDLRK 235


>sp|NUOD_FRACC|NADH-QUINONE oxidoreductase subunit D|Frankia casuarinae (strain DSM 45818

Query: 1   SGIQWDLRKT 10
           +G+ WDLRKT
Sbjct: 299 AGLPWDLRKT 308


>sp|NUOD1_SALAI|NADH-QUINONE oxidoreductase subunit D 1|Salinispora arenicola (strain CNS-205)

Query: 1   SGIQWDLRKT 10
           +G+ WDLRKT
Sbjct: 258 AGLAWDLRKT 267


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 266 SGVAWDLRK 274


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 248 SGVAWDLRK 256


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 248 SGVAWDLRK 256


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 248 SGVAWDLRK 256


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 248 SGVAWDLRK 256


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 249 SGVAWDLRK 257


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 248 SGVAWDLRK 256


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 248 SGVAWDLRK 256


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 267 SGVAWDLRK 275


>sp|NDHH_TRIEI|NAD(P)H-QUINONE oxidoreductase subunit H|Trichodesmium erythraeum (strain IMS101)

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 228 SGVKWDLRK 236


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 266 SGVAWDLRK 274


>sp|NUOD_CAMC5|NADH-QUINONE oxidoreductase subunit D|Campylobacter curvus (strain 525.92)

Query: 1   SGIQWDLRK 9
           SG++WD+RK
Sbjct: 240 SGVKWDIRK 248


>sp|NUOD_PARS2|NADH-QUINONE oxidoreductase subunit D|Parafrankia sp. (strain EAN1pec)

Query: 1   SGIQWDLRKT 10
           +G+ WDLRKT
Sbjct: 274 AGLPWDLRKT 283


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   SGIQWDLRK 9
           SG++WD+RK
Sbjct: 249 SGVEWDVRK 257


>sp|NUOD_CUTAK|NADH-QUINONE oxidoreductase subunit D|Cutibacterium acnes (strain DSM 16379

Query: 1   SGIQWDLRKT 10
           +G+ WDLRKT
Sbjct: 247 TGLPWDLRKT 256


>sp|NDHH_SYNY3|NAD(P)H-QUINONE oxidoreductase subunit H|Synechocystis sp. (strain ATCC 27184

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 228 SGVKWDLRK 236


>sp|NDHH_PROMP|NAD(P)H-QUINONE oxidoreductase subunit H|Prochlorococcus marinus subsp. pastoris

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 228 SGVSWDLRK 236


>sp|NUOD_FRAAA|NADH-QUINONE oxidoreductase subunit D|Frankia alni (strain DSM 45986

Query: 1   SGIQWDLRKT 10
           +G+ WDLRKT
Sbjct: 287 AGLPWDLRKT 296


>sp|NUOD2_SYMTH|NADH-QUINONE oxidoreductase subunit D 2|Symbiobacterium thermophilum (strain DSM

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 239 SGVKWDLRK 247


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 229 SGVPWDLRK 237


>sp|NDHH_MICAN|NAD(P)H-QUINONE oxidoreductase subunit H|Microcystis aeruginosa (strain NIES-843 /

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 228 SGVKWDLRK 236


>sp|NDHH_PROM9|NAD(P)H-QUINONE oxidoreductase subunit H|Prochlorococcus marinus (strain MIT 9312)

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 228 SGVSWDLRK 236


>sp|NDHH_PROMS|NAD(P)H-QUINONE oxidoreductase subunit H|Prochlorococcus marinus (strain AS9601)

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 228 SGVSWDLRK 236


>sp|NDHH_PROM5|NAD(P)H-QUINONE oxidoreductase subunit H|Prochlorococcus marinus (strain MIT 9515)

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 228 SGVSWDLRK 236


>sp|NDHH_PROM4|NAD(P)H-QUINONE oxidoreductase subunit H|Prochlorococcus marinus (strain MIT 9211)

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 228 SGVSWDLRK 236


>sp|NDHH_PROM2|NAD(P)H-QUINONE oxidoreductase subunit H|Prochlorococcus marinus (strain MIT 9215)

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 228 SGVSWDLRK 236


>sp|NDHH_NOSS1|NAD(P)H-QUINONE oxidoreductase subunit H|Nostoc sp. (strain PCC 7120

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 228 SGVKWDLRK 236


>sp|NDHH_PROM0|NAD(P)H-QUINONE oxidoreductase subunit H|Prochlorococcus marinus (strain MIT 9301)

Query: 1   SGIQWDLRK 9
           SG+ WDLRK
Sbjct: 228 SGVSWDLRK 236


>sp|NDHH_TRIV2|NAD(P)H-QUINONE oxidoreductase subunit H|Trichormus variabilis (strain ATCC 29413

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 228 SGVKWDLRK 236


>sp|NDHH_CHLAT|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Chlorokybus atmophyticus

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 227 SGVKWDLRK 235


>sp|NDHH_PICP2|NAD(P)H-QUINONE oxidoreductase subunit H|Picosynechococcus sp. (strain ATCC 27264

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 228 SGVKWDLRK 236


>sp|NDHH_LEMMI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Lemna minor (Common

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 229 SGISWDLRK 237


>sp|NDHH_POPTR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Populus trichocarpa

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 227 SGVRWDLRK 235


>sp|NDHH_POPAL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Populus alba (White poplar)

Query: 1   SGIQWDLRK 9
           SG++WDLRK
Sbjct: 227 SGVRWDLRK 235


>sp|NDHH_AMBTC|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Amborella trichopoda

Query: 1   SGIQWDLRK 9
           SGI WDLRK
Sbjct: 227 SGIPWDLRK 235




61|Sequence|301|310|DLRKTQPYDV

>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   DLRKTQPYDV 10
           DLRKTQPYDV
Sbjct: 236 DLRKTQPYDV 245


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain EF01-2)

Query: 1   DLRKTQPYDV 10
           DLRKTQPYDV
Sbjct: 253 DLRKTQPYDV 262


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   DLRKTQPYDV 10
           DLRKTQPYDV
Sbjct: 253 DLRKTQPYDV 262


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   DLRKTQPYDV 10
           DLRKTQPYDV
Sbjct: 234 DLRKTQPYDV 243


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   DLRKTQPYDV 10
           DLRKTQPYDV
Sbjct: 253 DLRKTQPYDV 262


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   DLRKTQPYDV 10
           DLRKTQPYDV
Sbjct: 253 DLRKTQPYDV 262


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   DLRKTQPYDV 10
           DLRKTQPYDV
Sbjct: 301 DLRKTQPYDV 310


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   DLRKTQPYDV 10
           DLRKTQPYDV
Sbjct: 301 DLRKTQPYDV 310


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   DLRKTQPYDV 10
           DLRKTQPYDV
Sbjct: 301 DLRKTQPYDV 310


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   DLRKTQPYDV 10
           DLRKTQPYDV
Sbjct: 301 DLRKTQPYDV 310


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   DLRKTQPYDV 10
           DLRKTQPYDV
Sbjct: 301 DLRKTQPYDV 310


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   DLRKTQPYDV 10
           DLRKTQPYDV
Sbjct: 301 DLRKTQPYDV 310


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   DLRKTQPYDV 10
           DLRKTQPYDV
Sbjct: 301 DLRKTQPYDV 310


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1   DLRKTQPYDV 10
           DLRK+QPYDV
Sbjct: 232 DLRKSQPYDV 241


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain HTCC2594)

Query: 1   DLRKTQPYDV 10
           DLRK+QPYDV
Sbjct: 241 DLRKSQPYDV 250


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1   DLRKTQPYDV 10
           DLRK+QPYDV
Sbjct: 232 DLRKSQPYDV 241


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1   DLRKTQPYDV 10
           DLRK+QPYDV
Sbjct: 230 DLRKSQPYDV 239


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   DLRKTQPYDV 10
           DLRKTQPY+V
Sbjct: 238 DLRKTQPYEV 247


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   DLRKTQPYDV 10
           DLRK+QPYDV
Sbjct: 241 DLRKSQPYDV 250


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   DLRKTQPYDV 10
           DLRKTQPY+V
Sbjct: 253 DLRKTQPYEV 262


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   DLRKTQPYDV 10
           DLRKTQPY+V
Sbjct: 253 DLRKTQPYEV 262


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   DLRKTQPYDV 10
           DLRKTQPY+V
Sbjct: 253 DLRKTQPYEV 262


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1   DLRKTQPYDV 10
           DLRKTQPY+V
Sbjct: 254 DLRKTQPYEV 263


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1   DLRKTQPYDV 10
           DLRKTQPY+V
Sbjct: 254 DLRKTQPYEV 263


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1   DLRKTQPYDV 10
           DLRKTQPY+V
Sbjct: 254 DLRKTQPYEV 263


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   DLRKTQPYDV 10
           DLRKTQPY+V
Sbjct: 253 DLRKTQPYEV 262


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. mediasiatica

Query: 1   DLRKTQPYDV 10
           DLRKTQPY+V
Sbjct: 253 DLRKTQPYEV 262


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1   DLRKTQPYDV 10
           DLRKTQPY+V
Sbjct: 254 DLRKTQPYEV 263


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   DLRKTQPYDV 10
           DLRKTQPY+V
Sbjct: 253 DLRKTQPYEV 262


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   DLRKTQPYDV 10
           DLRKTQPY+V
Sbjct: 253 DLRKTQPYEV 262


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1   DLRKTQPYDV 10
           DLRKTQPY+V
Sbjct: 253 DLRKTQPYEV 262


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1   DLRKTQPYDV 10
           DLRK QPYDV
Sbjct: 253 DLRKQQPYDV 262


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1   DLRKTQPYDV 10
           D+RK+QPYDV
Sbjct: 244 DIRKSQPYDV 253


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   DLRKTQPYDV 10
           DLRK QPYDV
Sbjct: 253 DLRKKQPYDV 262


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   DLRKTQPYD 9
           DLRK+QPYD
Sbjct: 243 DLRKSQPYD 251


>sp|NUOD_CUTAK|NADH-QUINONE oxidoreductase subunit D|Cutibacterium acnes (strain DSM 16379

Query: 1   DLRKTQPY 8
           DLRKTQPY
Sbjct: 252 DLRKTQPY 259


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   DLRKTQPYD 9
           DLRK+QPYD
Sbjct: 234 DLRKSQPYD 242


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   DLRKTQPYD 9
           DLRK+QPYD
Sbjct: 229 DLRKSQPYD 237


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   DLRKTQPYD 9
           DLRK+QPYD
Sbjct: 234 DLRKSQPYD 242


>sp|NUOD_NOCSJ|NADH-QUINONE oxidoreductase subunit D|Nocardioides sp. (strain ATCC BAA-499

Query: 1   DLRKTQPY 8
           DLRKTQPY
Sbjct: 265 DLRKTQPY 272


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1   DLRKTQPYD 9
           DLRK+QPYD
Sbjct: 238 DLRKSQPYD 246


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   DLRKTQPYDV 10
           D+RKTQPY+V
Sbjct: 254 DVRKTQPYEV 263


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   DLRKTQPYDV 10
           D+RKTQPY+V
Sbjct: 254 DVRKTQPYEV 263


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   DLRKTQPYDV 10
           D+RKTQPY+V
Sbjct: 254 DVRKTQPYEV 263


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   DLRKTQPYDV 10
           D+RKTQPY+V
Sbjct: 254 DVRKTQPYEV 263


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   DLRKTQPYDV 10
           D+RKTQPY+V
Sbjct: 254 DVRKTQPYEV 263


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1   DLRKTQPYDV 10
           DLRK+QPY+V
Sbjct: 253 DLRKSQPYEV 262


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1   DLRKTQPYDV 10
           DLRK+QPYD 
Sbjct: 230 DLRKSQPYDA 239


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1   DLRKTQPYDV 10
           DLRK+ PYDV
Sbjct: 229 DLRKSNPYDV 238


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   DLRKTQPYDV 10
           DLRK+QPY+V
Sbjct: 226 DLRKSQPYEV 235


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1   DLRKTQPYDV 10
           DLRK+ PYDV
Sbjct: 229 DLRKSNPYDV 238


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1   DLRKTQPYDV 10
           DLRK+ PYDV
Sbjct: 227 DLRKSNPYDV 236


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1   DLRKTQPYDV 10
           DLRK+ PYDV
Sbjct: 227 DLRKSNPYDV 236


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1   DLRKTQPYDV 10
           DLRK+ PYDV
Sbjct: 229 DLRKSNPYDV 238


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1   DLRKTQPYDV 10
           DLRK+ PYDV
Sbjct: 229 DLRKSNPYDV 238


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1   DLRKTQPYDV 10
           DLRK+ PYDV
Sbjct: 229 DLRKSNPYDV 238


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   DLRKTQPYDV 10
           DLRK+QPY++
Sbjct: 231 DLRKSQPYEI 240


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1   DLRKTQPYDV 10
           DLRK+ PYDV
Sbjct: 229 DLRKSNPYDV 238


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   DLRKTQPYD 9
           DLRK QPYD
Sbjct: 234 DLRKAQPYD 242


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain CJ2)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKQQPYEV 262


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   DLRKTQPYDV 10
           DLRK+QPY++
Sbjct: 231 DLRKSQPYEI 240


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   DLRKTQPYDV 10
           DLRK+QPY++
Sbjct: 228 DLRKSQPYEI 237


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1   DLRKTQPYDV 10
           DLRK+ PYDV
Sbjct: 229 DLRKSNPYDV 238


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1   DLRKTQPYDV 10
           DLRK+ PYDV
Sbjct: 229 DLRKSNPYDV 238


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1   DLRKTQPYDV 10
           DLRK+ PYDV
Sbjct: 229 DLRKSNPYDV 238


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   DLRKTQPYDV 10
           DLRK+QPY++
Sbjct: 228 DLRKSQPYEI 237


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1   DLRKTQPYDV 10
           DLRK+QPY++
Sbjct: 236 DLRKSQPYEI 245


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   DLRKTQPYDV 10
           DLRK+QPY++
Sbjct: 228 DLRKSQPYEI 237


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   DLRKTQPYDV 10
           DLRK+QPY++
Sbjct: 231 DLRKSQPYEI 240


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   DLRKTQPYD 9
           D+RK+QPYD
Sbjct: 316 DIRKSQPYD 324


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1   DLRKTQPYD 9
           DLRK QPYD
Sbjct: 253 DLRKKQPYD 261


>sp|NUOD2_STRCO|NADH-QUINONE oxidoreductase subunit D 2|Streptomyces coelicolor (strain ATCC

Query: 1   DLRKTQPY 8
           DLRKTQPY
Sbjct: 262 DLRKTQPY 269


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   DLRKTQPYD 9
           D+RKT+PYD
Sbjct: 320 DVRKTEPYD 328


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1   DLRKTQPYDV 10
           DLRK+QPY++
Sbjct: 231 DLRKSQPYEI 240


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1   DLRKTQPYDV 10
           DLRK+QPY++
Sbjct: 233 DLRKSQPYEI 242


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   DLRKTQPYD 9
           DLRK QPYD
Sbjct: 253 DLRKKQPYD 261


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1   DLRKTQPYDV 10
           DLRK+QPY++
Sbjct: 230 DLRKSQPYEL 239


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain DSM

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 254 DLRKMQPYEV 263


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain LB400)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain K96243)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain DSM

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM 17343

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP 134

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1   DLRKTQPYDV 10
           D+RK+QPY+V
Sbjct: 253 DMRKSQPYEV 262


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1   DLRKTQPYDV 10
           DLRK QPY++
Sbjct: 253 DLRKKQPYEI 262


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   DLRKTQPYDV 10
           DLRK  PYDV
Sbjct: 232 DLRKAAPYDV 241


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   DLRKTQPYDV 10
           DLRK QPY+V
Sbjct: 253 DLRKKQPYEV 262




62|Sequence|306|315|QPYDVYDQVE

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   QPYDVYDQVE 10
           QPYDVYDQVE
Sbjct: 306 QPYDVYDQVE 315


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   QPYDVYDQVE 10
           QPYDVYDQVE
Sbjct: 306 QPYDVYDQVE 315


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   QPYDVYDQVE 10
           QPYDVYDQVE
Sbjct: 306 QPYDVYDQVE 315


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   QPYDVYDQVE 10
           QPYDVYDQVE
Sbjct: 306 QPYDVYDQVE 315


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   QPYDVYDQVE 10
           QPYDVYDQVE
Sbjct: 306 QPYDVYDQVE 315


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   QPYDVYDQVE 10
           QPYDVYDQVE
Sbjct: 306 QPYDVYDQVE 315


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   QPYDVYDQVE 10
           QPYDVYDQVE
Sbjct: 306 QPYDVYDQVE 315


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   QPYDVYDQVE 10
           QPYD YDQVE
Sbjct: 321 QPYDAYDQVE 330


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus

Query: 1  QPYDVYDQVE 10
          QPYDVYDQVE
Sbjct: 77 QPYDVYDQVE 86


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1   QPYDVYDQVE 10
           QPYDVYDQ+E
Sbjct: 235 QPYDVYDQME 244


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   QPYDVYDQVE 10
           QPYDVYD+VE
Sbjct: 258 QPYDVYDRVE 267


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   QPYDVYDQVE 10
           QPYDVYD+V+
Sbjct: 258 QPYDVYDRVD 267


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain HTCC2594)

Query: 1   QPYDVYDQVE 10
           QPYDVYD++E
Sbjct: 246 QPYDVYDRME 255


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   QPYDVYDQVE 10
           QPYDVYD++E
Sbjct: 239 QPYDVYDELE 248


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   QPYDVYDQVE 10
           QPYD YD+VE
Sbjct: 258 QPYDAYDRVE 267


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   QPYDVYDQVE 10
           QPYDVYD++E
Sbjct: 246 QPYDVYDRME 255


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   QPYDVYDQVE 10
           QPYD YD+VE
Sbjct: 259 QPYDNYDKVE 268


>sp|RLMN_CYTH3|PROBABLE dual-specificity RNA methyltransferase RlmN|Cytophaga hutchinsonii

Query: 1   QPYDVYDQV 9
           +PY++YDQV
Sbjct: 150 EPYEIYDQV 158


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 2   PYDVYDQVE 10
           PYDVYDQ++
Sbjct: 238 PYDVYDQLD 246


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   QPYDVYDQVE 10
           QPYDVYD+++
Sbjct: 258 QPYDVYDRMD 267


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   QPYDVYDQVE 10
           QPYDVYD+++
Sbjct: 258 QPYDVYDKMD 267


>sp|NUOD_WOLSU|NADH-QUINONE oxidoreductase subunit D|Wolinella succinogenes (strain ATCC 29543

Query: 1   QPYDVYDQVE 10
           QPY++YD+VE
Sbjct: 249 QPYELYDEVE 258


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1   QPYDVYDQVE 10
           QPY VYDQ+E
Sbjct: 258 QPYAVYDQLE 267


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   QPYDVYDQVE 10
           QPY+VYDQV+
Sbjct: 258 QPYEVYDQVD 267


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   QPYDVYDQVE 10
           QPYD Y+Q+E
Sbjct: 234 QPYDCYEQLE 243


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1   QPYDVYDQVE 10
           QPY+VYDQV+
Sbjct: 258 QPYEVYDQVD 267


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1   QPYDVYDQVE 10
           QPYDVYD+++
Sbjct: 258 QPYDVYDRMD 267


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1   QPYDVYDQVE 10
           QPYD YD+V+
Sbjct: 258 QPYDAYDRVD 267


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1   QPYDVYDQVE 10
           QPYD YD+V+
Sbjct: 249 QPYDKYDEVD 258


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   QPYDVYDQVE 10
           QPY++YD++E
Sbjct: 236 QPYEIYDELE 245


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   QPYDVYDQVE 10
           QPY++YD++E
Sbjct: 236 QPYEIYDELE 245


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 2   PYDVYDQVE 10
           PYDVYD++E
Sbjct: 235 PYDVYDEME 243




63|Sequence|311|320|YDQVEFDVPV

>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   YDQVEFDVPV 10
           YDQVEFDVPV
Sbjct: 326 YDQVEFDVPV 335


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   YDQVEFDVPV 10
           YDQVEFDVPV
Sbjct: 311 YDQVEFDVPV 320


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   YDQVEFDVPV 10
           YDQVEFDVPV
Sbjct: 311 YDQVEFDVPV 320


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   YDQVEFDVPV 10
           YDQVEFDVPV
Sbjct: 311 YDQVEFDVPV 320


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   YDQVEFDVPV 10
           YDQVEFDVPV
Sbjct: 311 YDQVEFDVPV 320


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   YDQVEFDVPV 10
           YDQVEFDVP+
Sbjct: 311 YDQVEFDVPI 320


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   YDQVEFDVPV 10
           YDQVEFDVP+
Sbjct: 311 YDQVEFDVPI 320


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   YDQVEFDVPV 10
           YDQVEFDVP+
Sbjct: 311 YDQVEFDVPI 320


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1   YDQVEFDVPV 10
           YDQ+EFD+PV
Sbjct: 263 YDQLEFDIPV 272


>sp|NUOD_WOLSU|NADH-QUINONE oxidoreductase subunit D|Wolinella succinogenes (strain ATCC 29543

Query: 1   YDQVEFDVPV 10
           YD+VEFD+PV
Sbjct: 254 YDEVEFDIPV 263


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   YDQVEFDVPV 10
           YDQ++FDVPV
Sbjct: 242 YDQLDFDVPV 251


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus

Query: 1  YDQVEFDVPV 10
          YDQVEFDVP+
Sbjct: 82 YDQVEFDVPI 91


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   YDQVEFDVPV 10
           YD+VEFD+PV
Sbjct: 263 YDRVEFDIPV 272


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1   YDQVEFDVPV 10
           YD+VEFD+PV
Sbjct: 263 YDRVEFDIPV 272


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp. pneumophila

Query: 1   YDQVEFDVPV 10
           YD+VEFD+PV
Sbjct: 263 YDRVEFDIPV 272


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1   YDQVEFDVPV 10
           YD+V+FD+PV
Sbjct: 254 YDEVDFDIPV 263


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1   YDQVEFDVPV 10
           YDQ+EFD+PV
Sbjct: 240 YDQMEFDIPV 249


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   YDQVEFDVPV 10
           YDQV+FD+PV
Sbjct: 263 YDQVDFDIPV 272


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   YDQVEFDVPV 10
           YD+VEFD+PV
Sbjct: 263 YDRVEFDIPV 272


>sp|NUOCD_ACICJ|NADH-QUINONE oxidoreductase subunit C/D|Acidiphilium cryptum (strain JF-5)

Query: 1   YDQVEFDVPV 10
           YDQ+EFD+P+
Sbjct: 440 YDQLEFDIPI 449


>sp|NUCD1_AQUAE|NADH-QUINONE oxidoreductase subunit C/D 1|Aquifex aeolicus (strain VF5)

Query: 1   YDQVEFDVPV 10
           YD+VEFD+PV
Sbjct: 452 YDEVEFDIPV 461


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1   YDQVEFDVPV 10
           YDQ++FD+PV
Sbjct: 263 YDQIDFDIPV 272


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1   YDQVEFDVPV 10
           YDQV+FD+PV
Sbjct: 263 YDQVDFDIPV 272


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1   YDQVEFDVPV 10
           YD+V+FDVPV
Sbjct: 263 YDRVDFDVPV 272


>sp|NUOD_LEPBL|NADH-QUINONE oxidoreductase subunit D|Leptospira borgpetersenii serovar

Query: 1   YDQVEFDVPV 10
           YD+V+FDVP+
Sbjct: 253 YDKVDFDVPI 262


>sp|NUOD_LEPBJ|NADH-QUINONE oxidoreductase subunit D|Leptospira borgpetersenii serovar

Query: 1   YDQVEFDVPV 10
           YD+V+FDVP+
Sbjct: 252 YDKVDFDVPI 261


>sp|NUOCD_GLUDA|NADH-QUINONE oxidoreductase subunit C/D|Gluconacetobacter diazotrophicus (strain

Query: 1   YDQVEFDVP 9
           YDQ+EFD+P
Sbjct: 449 YDQLEFDIP 457


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   YDQVEFDVPV 10
           YD++EFD+PV
Sbjct: 244 YDELEFDIPV 253


>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC

Query: 1   YDQVEFDVPV 10
           YD+VEFD+PV
Sbjct: 245 YDRVEFDIPV 254


>sp|NUCD2_AQUAE|NADH-QUINONE oxidoreductase subunit C/D 2|Aquifex aeolicus (strain VF5)

Query: 1   YDQVEFDVPV 10
           YD+VEFD+PV
Sbjct: 430 YDEVEFDIPV 439


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 1   YDQVEFDVPV 10
           YD++EFD+PV
Sbjct: 240 YDEMEFDIPV 249


>sp|NUOD1_OPITP|NADH-QUINONE oxidoreductase subunit D 1|Opitutus terrae (strain DSM 11246

Query: 1   YDQVEFDVPV 10
           Y+Q EFDVPV
Sbjct: 273 YEQYEFDVPV 282


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1   YDQVEFDVPV 10
           YDQ++FD+PV
Sbjct: 263 YDQMDFDIPV 272


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1   YDQVEFDVPV 10
           YDQ++FD+PV
Sbjct: 263 YDQLKFDIPV 272


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   YDQVEFDVPV 10
           YD+V+FD+PV
Sbjct: 263 YDRVDFDIPV 272


>sp|NUOD1_SORC5|NADH-QUINONE oxidoreductase subunit D 1|Sorangium cellulosum (strain So ce56)

Query: 1   YDQVEFDVPV 10
           YD+ EFDVPV
Sbjct: 251 YDRFEFDVPV 260


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   YDQVEFDVPV 10
           YDQ++FD+PV
Sbjct: 238 YDQLDFDIPV 247


>sp|NUOD2_ANADF|NADH-QUINONE oxidoreductase subunit D 2|Anaeromyxobacter sp. (strain Fw109-5)

Query: 1   YDQVEFDVPV 10
           YD+++FD+PV
Sbjct: 279 YDRIDFDIPV 288


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   YDQVEFDVPV 10
           YD+VEF++PV
Sbjct: 264 YDKVEFNIPV 273


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1   YDQVEFDVPV 10
           YD+V+FD+PV
Sbjct: 263 YDRVDFDIPV 272


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1   YDQVEFDVPV 10
           YD+V+FD+PV
Sbjct: 263 YDRVDFDIPV 272


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC 49405

Query: 1   YDQVEFDVPV 10
           YD++EFD+P+
Sbjct: 249 YDEMEFDIPI 258


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   YDQVEFDVPV 10
           YD V+FD+PV
Sbjct: 282 YDAVDFDIPV 291


>sp|NUOD_LEPIN|NADH-QUINONE oxidoreductase subunit D|Leptospira interrogans serogroup

Query: 1   YDQVEFDVPV 10
           YD+V+FD+P+
Sbjct: 253 YDKVDFDIPI 262


>sp|NUOD_LEPIC|NADH-QUINONE oxidoreductase subunit D|Leptospira interrogans serogroup

Query: 1   YDQVEFDVPV 10
           YD+V+FD+P+
Sbjct: 253 YDKVDFDIPI 262


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 1   YDQVEFDVPV 10
           YD++EFD+P+
Sbjct: 240 YDEMEFDIPI 249


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   YDQVEFDVPV 10
           YD V+FDVPV
Sbjct: 281 YDAVDFDVPV 290


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   YDQVEFDVPV 10
           YD V+FDVPV
Sbjct: 281 YDAVDFDVPV 290


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   YDQVEFDVPV 10
           YD V+FDVPV
Sbjct: 281 YDAVDFDVPV 290


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   YDQVEFDVPV 10
           YD+V+FD+PV
Sbjct: 263 YDKVDFDIPV 272


>sp|NUOCD_NITMU|NADH-QUINONE oxidoreductase subunit C/D|Nitrosospira multiformis (strain ATCC

Query: 1   YDQVEFDVP 9
           YDQ EFDVP
Sbjct: 456 YDQFEFDVP 464


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   YDQVEFDVPV 10
           YDQ++FD+PV
Sbjct: 263 YDQLDFDIPV 272


>sp|NUOCD_AERHH|NADH-QUINONE oxidoreductase subunit C/D|Aeromonas hydrophila subsp. hydrophila

Query: 1   YDQVEFDVPV 10
           YDQ EF+VPV
Sbjct: 449 YDQFEFEVPV 458


>sp|NUOD2_ANASK|NADH-QUINONE oxidoreductase subunit D 2|Anaeromyxobacter sp. (strain K)

Query: 1   YDQVEFDVPV 10
           YD+++FD+PV
Sbjct: 279 YDRLDFDIPV 288


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   YDQVEFDVPV 10
           YDQ++FD+P+
Sbjct: 238 YDQLDFDIPI 247


>sp|NUOD_NITSB|NADH-QUINONE oxidoreductase subunit D|Nitratiruptor sp. (strain SB155-2)

Query: 1   YDQVEFDVPV 10
           YD+V+FD+PV
Sbjct: 256 YDEVDFDIPV 265


>sp|NUOD1_ANADE|NADH-QUINONE oxidoreductase subunit D 1|Anaeromyxobacter dehalogenans (strain

Query: 1   YDQVEFDVPV 10
           YD+++FD+PV
Sbjct: 278 YDRLDFDIPV 287


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 1   YDQVEFDVPV 10
           YD++EFD+PV
Sbjct: 240 YDEMEFDIPV 249


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   YDQVEFDVPV 10
           YDQ++FD+P+
Sbjct: 238 YDQLDFDIPI 247


>sp|NUOD_BARBK|NADH-QUINONE oxidoreductase subunit D|Bartonella bacilliformis (strain ATCC

Query: 1   YDQVEFDVPV 10
           YD++EFD+PV
Sbjct: 240 YDEMEFDIPV 249


>sp|NUOD_CAMC1|NADH-QUINONE oxidoreductase subunit D|Campylobacter concisus (strain 13826)

Query: 1   YDQVEFDVP 9
           YD++EFDVP
Sbjct: 255 YDELEFDVP 263


>sp|NUOD2_SYMTH|NADH-QUINONE oxidoreductase subunit D 2|Symbiobacterium thermophilum (strain DSM

Query: 1   YDQVEFDVPV 10
           YD+ EFD+PV
Sbjct: 254 YDRFEFDIPV 263


>sp|NUOD1_KORVE|NADH-QUINONE oxidoreductase subunit D 1|Koribacter versatilis (strain Ellin345)

Query: 1   YDQVEFDVPV 10
           YDQV+FDVP 
Sbjct: 254 YDQVDFDVPT 263


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   YDQVEFDVPV 10
           YD++EFD+PV
Sbjct: 251 YDRMEFDIPV 260


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1   YDQVEFDVPV 10
           YD++ FDVPV
Sbjct: 263 YDKINFDVPV 272


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain HTCC2594)

Query: 1   YDQVEFDVPV 10
           YD++EFD+PV
Sbjct: 251 YDRMEFDIPV 260


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   YDQVEFDVPV 10
           YD+++FDVPV
Sbjct: 263 YDKMDFDVPV 272


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   YDQVEFDVPV 10
           YD V+FD+PV
Sbjct: 281 YDAVDFDIPV 290


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   YDQVEFDVPV 10
           YD V+FD+PV
Sbjct: 281 YDAVDFDIPV 290


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   YDQVEFDVPV 10
           YD V+FD+PV
Sbjct: 281 YDAVDFDIPV 290


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1   YDQVEFDVPV 10
           YD+++FD+PV
Sbjct: 263 YDRLDFDIPV 272


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 1   YDQVEFDVPV 10
           YD V+FD+PV
Sbjct: 281 YDAVDFDIPV 290


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1   YDQVEFDVPV 10
           YD V+FD+PV
Sbjct: 281 YDAVDFDIPV 290


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1   YDQVEFDVPV 10
           YD+++FD+PV
Sbjct: 240 YDELQFDIPV 249


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1   YDQVEFDVPV 10
           YD+++FDVPV
Sbjct: 263 YDRMDFDVPV 272


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   YDQVEFDVPV 10
           YD+++FD+PV
Sbjct: 263 YDRMDFDIPV 272


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1   YDQVEFDVPV 10
           YD+++FD+PV
Sbjct: 263 YDRIDFDIPV 272


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1   YDQVEFDVPV 10
           YD+V+FD+P+
Sbjct: 263 YDRVDFDIPI 272


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1   YDQVEFDVPV 10
           YD+V+FD+P+
Sbjct: 263 YDRVDFDIPI 272


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1   YDQVEFDVPV 10
           YD+++FD+PV
Sbjct: 263 YDRIDFDIPV 272


>sp|NUOD_LEPBP|NADH-QUINONE oxidoreductase subunit D|Leptospira biflexa serovar Patoc (strain

Query: 1   YDQVEFDVPV 10
           YD+V FD+PV
Sbjct: 254 YDKVNFDIPV 263


>sp|NUOD_LEPBA|NADH-QUINONE oxidoreductase subunit D|Leptospira biflexa serovar Patoc (strain

Query: 1   YDQVEFDVPV 10
           YD+V FD+PV
Sbjct: 254 YDKVNFDIPV 263


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1   YDQVEFDVPV 10
           YD+V+FD+P+
Sbjct: 263 YDRVDFDIPI 272


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1   YDQVEFDVPV 10
           YD+V+FD+P+
Sbjct: 263 YDRVDFDIPI 272


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1   YDQVEFDVPV 10
           YD+V+FD+P+
Sbjct: 263 YDRVDFDIPI 272


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   YDQVEFDVPV 10
           YD+++FD+PV
Sbjct: 264 YDKMDFDIPV 273




64|Sequence|316|325|FDVPVGSRGD

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   FDVPVGSRGD 10
           FDVPVGSRGD
Sbjct: 316 FDVPVGSRGD 325


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   FDVPVGSRGD 10
           FDVPVGSRGD
Sbjct: 316 FDVPVGSRGD 325


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   FDVPVGSRGD 10
           FDVPVGSRGD
Sbjct: 316 FDVPVGSRGD 325


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   FDVPVGSRGD 10
           FDVPVGSRGD
Sbjct: 316 FDVPVGSRGD 325


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   FDVPVGSRGD 10
           FDVPVG+RGD
Sbjct: 247 FDVPVGTRGD 256


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   FDVPVGSRGD 10
           FDVP+GSRGD
Sbjct: 316 FDVPIGSRGD 325


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   FDVPVGSRGD 10
           FDVP+GSRGD
Sbjct: 316 FDVPIGSRGD 325


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   FDVPVGSRGD 10
           FDVP+GSRGD
Sbjct: 316 FDVPIGSRGD 325


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   FDVPVGSRGD 10
           FD+PVG+RGD
Sbjct: 258 FDIPVGTRGD 267


>sp|NUOD1_SORC5|NADH-QUINONE oxidoreductase subunit D 1|Sorangium cellulosum (strain So ce56)

Query: 1   FDVPVGSRGD 10
           FDVPVG+RGD
Sbjct: 256 FDVPVGTRGD 265


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   FDVPVGSRGD 10
           FDVPVG++GD
Sbjct: 251 FDVPVGTQGD 260


>sp|NUOD_BACMK|NADH-QUINONE oxidoreductase subunit D|Bacillus mycoides (strain KBAB4) (Bacillus

Query: 1   FDVPVGSRGD 10
           FDVPVGS GD
Sbjct: 243 FDVPVGSTGD 252


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   FDVPVGSRGD 10
           FD+PVG++GD
Sbjct: 249 FDIPVGTKGD 258


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   FDVPVGSRGD 10
           F++PVG+RGD
Sbjct: 253 FNIPVGTRGD 262


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   FDVPVGSRGD 10
           FDVP+G++GD
Sbjct: 335 FDVPIGTKGD 344


>sp|NUOCD_SULSY|NADH-QUINONE oxidoreductase subunit C/D|Sulfurihydrogenibium sp. (strain

Query: 1   FDVPVGSRGD 10
           FD+PVG +GD
Sbjct: 438 FDIPVGEKGD 447


>sp|NUOD_BACAH|NADH-QUINONE oxidoreductase subunit D|Bacillus thuringiensis (strain Al Hakam)

Query: 1   FDVPVGSRGD 10
           FD+PVGS GD
Sbjct: 243 FDIPVGSVGD 252


>sp|NQO4_THET8|NADH-QUINONE oxidoreductase subunit 4|Thermus thermophilus (strain ATCC 27634

Query: 1   FDVPVGSRGD 10
           FDVP+G RGD
Sbjct: 262 FDVPLGERGD 271


>sp|NUOD_THET2|NADH-QUINONE oxidoreductase subunit D|Thermus thermophilus (strain ATCC BAA-163

Query: 1   FDVPVGSRGD 10
           FDVP+G RGD
Sbjct: 262 FDVPLGERGD 271


>sp|NUOD_BACAN|NADH-QUINONE oxidoreductase subunit D|Bacillus anthracis

Query: 1   FDVPVGSRGD 10
           FD+PVGS GD
Sbjct: 243 FDIPVGSVGD 252


>sp|NUOD_BACC1|NADH-QUINONE oxidoreductase subunit D|Bacillus cereus (strain ATCC 10987

Query: 1   FDVPVGSRGD 10
           FD+PVGS GD
Sbjct: 243 FDIPVGSVGD 252


>sp|NUOD_BACCR|NADH-QUINONE oxidoreductase subunit D|Bacillus cereus (strain ATCC 14579

Query: 1   FDVPVGSRGD 10
           FD+PVGS GD
Sbjct: 243 FDIPVGSVGD 252


>sp|NUOD_HELPY|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain ATCC 700392

Query: 1   FDVPVGSRGD 10
           FDVPVG+ GD
Sbjct: 260 FDVPVGNYGD 269


>sp|NUOD_HELPS|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain Shi470)

Query: 1   FDVPVGSRGD 10
           FDVPVG+ GD
Sbjct: 260 FDVPVGNYGD 269


>sp|NUOD_HELPJ|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain J99 /

Query: 1   FDVPVGSRGD 10
           FDVPVG+ GD
Sbjct: 260 FDVPVGNYGD 269


>sp|NUOD_HELPH|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain HPAG1)

Query: 1   FDVPVGSRGD 10
           FDVPVG+ GD
Sbjct: 260 FDVPVGNYGD 269


>sp|NUOD_HELPG|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain G27)

Query: 1   FDVPVGSRGD 10
           FDVPVG+ GD
Sbjct: 260 FDVPVGNYGD 269


>sp|NUOD_HELP2|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain P12)

Query: 1   FDVPVGSRGD 10
           FDVPVG+ GD
Sbjct: 260 FDVPVGNYGD 269


>sp|NUOD_HELAH|NADH-QUINONE oxidoreductase subunit D|Helicobacter acinonychis (strain Sheeba)

Query: 1   FDVPVGSRGD 10
           FDVPVG+ GD
Sbjct: 260 FDVPVGNYGD 269


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   FDVPVGSRGD 10
           FDVPVG+ GD
Sbjct: 286 FDVPVGTNGD 295


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   FDVPVGSRGD 10
           FDVPVG+ GD
Sbjct: 286 FDVPVGTNGD 295


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   FDVPVGSRGD 10
           FDVPVG+ GD
Sbjct: 286 FDVPVGTNGD 295


>sp|NUOD1_ANADE|NADH-QUINONE oxidoreductase subunit D 1|Anaeromyxobacter dehalogenans (strain

Query: 1   FDVPVGSRGD 10
           FD+PVGS GD
Sbjct: 283 FDIPVGSNGD 292


>sp|NUOD1_OPITP|NADH-QUINONE oxidoreductase subunit D 1|Opitutus terrae (strain DSM 11246

Query: 1   FDVPVGSRGD 10
           FDVPVG++GD
Sbjct: 278 FDVPVGTKGD 287


>sp|NUOD2_ANASK|NADH-QUINONE oxidoreductase subunit D 2|Anaeromyxobacter sp. (strain K)

Query: 1   FDVPVGSRGD 10
           FD+PVGS GD
Sbjct: 284 FDIPVGSNGD 293


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 268 FDIPVGTNGD 277


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   FDVPVGSRGD 10
           FD+PVGS GD
Sbjct: 249 FDIPVGSTGD 258


>sp|NUOCD_BDEBA|NADH-QUINONE oxidoreductase subunit C/D|Bdellovibrio bacteriovorus (strain ATCC

Query: 1   FDVPVGSRGD 10
           FDVPVG+ GD
Sbjct: 413 FDVPVGTNGD 422


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 268 FDIPVGTNGD 277


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 268 FDIPVGTNGD 277


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 2   DVPVGSRGD 10
           D+PVG+RGD
Sbjct: 248 DIPVGTRGD 256


>sp|NUOD_AKKM8|NADH-QUINONE oxidoreductase subunit D|Akkermansia muciniphila (strain ATCC

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 267 FDVPVGEHGD 276


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain EF01-2)

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 268 FDVPVGKTGD 277


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 268 FDIPVGTNGD 277


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 268 FDIPVGANGD 277


>sp|NUOD1_HERA2|NADH-QUINONE oxidoreductase subunit D 1|Herpetosiphon aurantiacus (strain ATCC

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 272 FDVPVGQAGD 281


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 268 FDIPVGANGD 277


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 243 FDIPVGQNGD 252


>sp|NUOCD_SHEON|NADH-QUINONE oxidoreductase subunit C/D|Shewanella oneidensis (strain ATCC

Query: 1   FDVPVGSRGD 10
           F+VPVGS GD
Sbjct: 454 FEVPVGSNGD 463


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 286 FDIPVGTNGD 295


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 286 FDIPVGTNGD 295


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 286 FDIPVGTNGD 295


>sp|NUOD2_SYMTH|NADH-QUINONE oxidoreductase subunit D 2|Symbiobacterium thermophilum (strain DSM

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 259 FDIPVGQNGD 268


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 245 FDIPVGKHGD 254


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 286 FDIPVGTNGD 295


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 286 FDIPVGTNGD 295


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   FDVPVGSRGD 10
           FD+P+G+ GD
Sbjct: 268 FDIPIGANGD 277


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   FDVPVGSRGD 10
           FD+P+G+ GD
Sbjct: 268 FDIPIGANGD 277


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   FDVPVGSRGD 10
           FD+P+G+ GD
Sbjct: 268 FDIPIGANGD 277


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 268 FDIPVGTAGD 277


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   FDVPVGSRGD 10
           FD+P+G+ GD
Sbjct: 268 FDIPIGANGD 277


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   FDVPVGSRGD 10
           FD+P+G+ GD
Sbjct: 268 FDIPIGANGD 277


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. mediasiatica

Query: 1   FDVPVGSRGD 10
           FD+P+G+ GD
Sbjct: 268 FDIPIGANGD 277


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   FDVPVGSRGD 10
           FD+P+G+ GD
Sbjct: 268 FDIPIGANGD 277


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1   FDVPVGSRGD 10
           FD+P+G+ GD
Sbjct: 268 FDIPIGANGD 277


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 287 FDIPVGTAGD 296


>sp|NUOCD_AERS4|NADH-QUINONE oxidoreductase subunit C/D|Aeromonas salmonicida (strain A449)

Query: 1   FDVPVGSRGD 10
           F+VPVGS GD
Sbjct: 454 FEVPVGSNGD 463


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 268 FDVPVGKTGD 277


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 268 FDVPVGVNGD 277


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 245 FDVPVGKNGD 254


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 268 FDIPVGATGD 277


>sp|NUOCD_PHOLL|NADH-QUINONE oxidoreductase subunit C/D|Photorhabdus laumondii subsp. laumondii

Query: 1   FDVPVGSRGD 10
           FDVP+G+ GD
Sbjct: 452 FDVPIGNNGD 461


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 245 FDVPVGKNGD 254


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 259 FDIPVGRHGD 268


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   FDVPVGSRGD 10
           FD+P+G  GD
Sbjct: 243 FDIPIGQNGD 252


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   FDVPVGSRGD 10
           FD+P+G  GD
Sbjct: 243 FDIPIGQNGD 252


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain DS-1

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 245 FDIPVGKNGD 254


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain CJ2)

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 268 FDIPVGKTGD 277


>sp|NUOCD_CAMFF|NADH-QUINONE oxidoreductase subunit C/D|Campylobacter fetus subsp. fetus (strain

Query: 1   FDVPVGSRGD 10
           F VPVGS GD
Sbjct: 414 FSVPVGSEGD 423


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 245 FDIPVGKNGD 254


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 245 FDIPVGKNGD 254


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 245 FDIPVGKNGD 254


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 245 FDIPVGKNGD 254


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 268 FDIPVGKNGD 277


>sp|NUOD1_ROSS1|NADH-QUINONE oxidoreductase subunit D 1|Roseiflexus sp. (strain RS-1)

Query: 1   FDVPVGSRGD 10
           FD+P+GS GD
Sbjct: 244 FDIPIGSVGD 253


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 245 FDIPVGKNGD 254


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1   FDVPVGSRGD 10
           FDVP+G  GD
Sbjct: 250 FDVPIGKNGD 259


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 251 FDIPVGKNGD 260


>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 250 FDIPVGKNGD 259


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 245 FDIPVGKNGD 254


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 245 FDIPVGKNGD 254


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 245 FDIPVGKNGD 254


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 268 FDIPVGKNGD 277


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 245 FDIPVGKNGD 254


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 268 FDIPVGKTGD 277


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp. pneumophila

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 268 FDIPVGKTGD 277


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 268 FDIPVGKTGD 277


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 268 FDIPVGKTGD 277


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 268 FDIPVGKTGD 277


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1   FDVPVGSRGD 10
           F++PVG++GD
Sbjct: 259 FEIPVGTKGD 268


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 269 FDVPVGVNGD 278


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 268 FDIPVGKTGD 277


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 268 FDVPVGVNGD 277


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 268 FDVPVGVNGD 277


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 268 FDVPVGVNGD 277


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 268 FDVPVGVNGD 277


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 268 FDVPVGVNGD 277


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 268 FDVPVGVNGD 277


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 245 FDIPVGKNGD 254


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisA53)

Query: 1   FDVPVGSRGD 10
           FDVP+G  GD
Sbjct: 245 FDVPIGKNGD 254


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 268 FDVPVGVNGD 277


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 268 FDVPVGVNGD 277


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 269 FDVPVGVNGD 278


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 269 FDVPVGVNGD 278


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1   FDVPVGSRGD 10
           FD+P+G  GD
Sbjct: 245 FDIPIGKHGD 254


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 268 FDIPVGKTGD 277


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 269 FDVPVGVNGD 278


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 269 FDVPVGVNGD 278


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 268 FDIPVGAGGD 277


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC BAA-705

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 245 FDIPVGKNGD 254


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1   FDVPVGSRGD 10
           FDVPVG  GD
Sbjct: 268 FDVPVGVNGD 277


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1   FDVPVGSRGD 10
           FD+PVG  GD
Sbjct: 268 FDIPVGKTGD 277


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1   FDVPVGSRGD 10
           FDVP+G  GD
Sbjct: 247 FDVPIGKNGD 256


>sp|NUOD2_ANADF|NADH-QUINONE oxidoreductase subunit D 2|Anaeromyxobacter sp. (strain Fw109-5)

Query: 1   FDVPVGSRGD 10
           FD+PVG+ GD
Sbjct: 284 FDIPVGTNGD 293


>sp|NUOCD_CERSK|NADH-QUINONE oxidoreductase subunit C/D|Cereibacter sphaeroides (strain KD131 /

Query: 1   FDVPVGSRGD 10
           F+VP+G RGD
Sbjct: 433 FEVPLGQRGD 442




65|Sequence|321|330|GSRGDCYDRY

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   GSRGDCYDRY 10
           GSRGDCYDRY
Sbjct: 321 GSRGDCYDRY 330


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   GSRGDCYDRY 10
           GSRGDCYDRY
Sbjct: 321 GSRGDCYDRY 330


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   GSRGDCYDRY 10
           GSRGDCYDRY
Sbjct: 321 GSRGDCYDRY 330


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   GSRGDCYDRY 10
           GSRGDCYDRY
Sbjct: 321 GSRGDCYDRY 330


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   GSRGDCYDRY 10
           GSRGDCYDRY
Sbjct: 321 GSRGDCYDRY 330


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   GSRGDCYDRY 10
           GSRGDCYDRY
Sbjct: 321 GSRGDCYDRY 330


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   GSRGDCYDRY 10
           GSRGDCYDRY
Sbjct: 321 GSRGDCYDRY 330


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   GSRGDCYDRY 10
           G+RGDCYDRY
Sbjct: 256 GTRGDCYDRY 265


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   GSRGDCYDRY 10
           G+RGDCYDRY
Sbjct: 258 GTRGDCYDRY 267


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   GSRGDCYDRY 10
           G+RGDCYDRY
Sbjct: 252 GTRGDCYDRY 261


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   GSRGDCYDRY 10
           G++GDCYDRY
Sbjct: 340 GTKGDCYDRY 349


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   GSRGDCYDRY 10
           G++GDCYDRY
Sbjct: 256 GTQGDCYDRY 265


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   GSRGDCYDRY 10
           G++GDCYDRY
Sbjct: 254 GTKGDCYDRY 263


>sp|NUOD1_OPITP|NADH-QUINONE oxidoreductase subunit D 1|Opitutus terrae (strain DSM 11246

Query: 1   GSRGDCYDRY 10
           G++GDCYDRY
Sbjct: 283 GTKGDCYDRY 292


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   GSRGDCYDRY 10
           G +GDCYDRY
Sbjct: 251 GEKGDCYDRY 260


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1   GSRGDCYDRY 10
           GS GDCYDRY
Sbjct: 256 GSNGDCYDRY 265


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   GSRGDCYDRY 10
           G+RGDCYDR+
Sbjct: 263 GTRGDCYDRF 272


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   GSRGDCYDRY 10
           G +GDCYDRY
Sbjct: 251 GEKGDCYDRY 260


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   GSRGDCYDRY 10
           G +GDCYDRY
Sbjct: 251 GKKGDCYDRY 260


>sp|NUOD_DESRM|NADH-QUINONE oxidoreductase subunit D|Desulforamulus reducens (strain ATCC

Query: 1   GSRGDCYDRY 10
           G++GDC+DRY
Sbjct: 249 GTKGDCFDRY 258


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 247 GKNGDCYDRY 256


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 249 GKNGDCYDRY 258


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 249 GKNGDCYDRY 258


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 247 GKNGDCYDRY 256


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 249 GKNGDCYDRY 258


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 249 GKNGDCYDRY 258


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 249 GKNGDCYDRY 258


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 249 GKNGDCYDRY 258


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 249 GKNGDCYDRY 258


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 249 GKNGDCYDRY 258


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 259 GKNGDCYDRY 268


>sp|NUOCD_HYDS0|NADH-QUINONE oxidoreductase subunit C/D|Hydrogenobaculum sp. (strain Y04AAS1)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 439 GENGDCYDRY 448


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GTNGDCYDRY 282


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GTNGDCYDRY 282


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GTNGDCYDRY 282


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 248 GQNGDCYDRY 257


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 249 GKNGDCYDRY 258


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 248 GQNGDCYDRY 257


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 248 GQNGDCYDRY 257


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GANGDCYDRY 282


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 250 GANGDCYDRY 259


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GANGDCYDRY 282


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GANGDCYDRY 282


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. mediasiatica

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GANGDCYDRY 282


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GANGDCYDRY 282


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GANGDCYDRY 282


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GANGDCYDRY 282


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GANGDCYDRY 282


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GANGDCYDRY 282


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisA53)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 272 GKNGDCYDRY 281


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 254 GKNGDCYDRY 263


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain JCM

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 252 GKNGDCYDRY 261


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GANGDCYDRY 282


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC 19089

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 254 GKNGDCYDRY 263


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKHGDCYDRY 259


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKHGDCYDRY 259


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 252 GKNGDCYDRY 261


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 251 GENGDCYDRY 260


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 254 GKNGDCYDRY 263


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC 49405

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 259 GKNGDCYDRY 268


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 252 GKNGDCYDRY 261


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 256 GKTGDCYDRY 265


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 256 GKNGDCYDRY 265


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 262 GKNGDCYDRY 271


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain TIE-1)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 256 GKNGDCYDRY 265


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB18)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 256 GKNGDCYDRY 265


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 256 GKNGDCYDRY 265


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 258 GKHGDCYDRY 267


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 258 GRNGDCYDRY 267


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 258 GKHGDCYDRY 267


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 291 GTNGDCYDRY 300


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 291 GTNGDCYDRY 300


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 291 GTNGDCYDRY 300


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 291 GTNGDCYDRY 300


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 291 GTNGDCYDRY 300


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17025

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 259 GKNGDCYDRY 268


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain CJ2)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GKTGDCYDRY 282


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17023

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 261 GKNGDCYDRY 270


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 291 GTNGDCYDRY 300


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 291 GTNGDCYDRY 300


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 291 GTNGDCYDRY 300


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB5)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 270 GKNGDCYDRY 279


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17029

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 259 GKNGDCYDRY 268


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GTNGDCYDRY 282


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GATGDCYDRY 282


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 268 GKNGDCYDRY 277


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 261 GKNGDCYDRY 270


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUCD1_AQUAE|NADH-QUINONE oxidoreductase subunit C/D 1|Aquifex aeolicus (strain VF5)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 462 GEIGDCYDRY 471


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 291 GKEGDCYDRY 300


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 255 GKNGDCYDRY 264


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 256 GKNGDCYDRY 265


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG 29417

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain DS-1

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 250 GKNGDCYDRY 259


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain DSM

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 274 GVNGDCYDRY 283


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 274 GVNGDCYDRY 283


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 291 GKEGDCYDRY 300


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GKTGDCYDRY 282


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain LB400)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GKTGDCYDRY 282


>sp|NUOD_METI4|NADH-QUINONE oxidoreductase subunit D|Methylacidiphilum infernorum (isolate V4)

Query: 1   GSRGDCYDRY 10
           GS GDC+DRY
Sbjct: 276 GSVGDCFDRY 285


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 274 GVNGDCYDRY 283


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 274 GVNGDCYDRY 283


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain K96243)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain EF01-2)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GKTGDCYDRY 282


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 292 GTAGDCYDRY 301


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040) (Silicibacter

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 260 GKNGDCYDRY 269


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GREGDCYDRY 282


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 274 GVNGDCYDRY 283


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 274 GVNGDCYDRY 283


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GREGDCYDRY 282


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GREGDCYDRY 282


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GKNGDCYDRY 282


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GKTGDCYDRY 282


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   GSRGDCYDRY 10
           G+ GDCYDR+
Sbjct: 261 GTSGDCYDRF 270


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GKTGDCYDRY 282


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 262 GKNGDCYDRY 271


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GREGDCYDRY 282


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GREGDCYDRY 282


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1   GSRGDCYDR 9
           G++GDCYDR
Sbjct: 264 GTKGDCYDR 272


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1   GSRGDCYDRY 10
           GS GDCYDRY
Sbjct: 253 GSNGDCYDRY 262


>sp|NUOCD_RHOPB|NADH-QUINONE oxidoreductase subunit C/D|Rhodopseudomonas palustris (strain

Query: 1   GSRGDCYDR 9
           G RGDCYDR
Sbjct: 439 GHRGDCYDR 447


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 273 GAGGDCYDRY 282


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GKNGDCYDRY 282


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GKTGDCYDRY 282


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 267 GVNGDCYDRY 276


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 268 GRNGDCYDRY 277


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   GSRGDCYDRY 10
           G  GDC+DRY
Sbjct: 249 GKNGDCFDRY 258


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVNGDCYDRY 282


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GKTGDCYDRY 282


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp. pneumophila

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GKTGDCYDRY 282


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GKTGDCYDRY 282


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GKTGDCYDRY 282


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 274 GVNGDCYDRY 283


>sp|NUOD_AKKM8|NADH-QUINONE oxidoreductase subunit D|Akkermansia muciniphila (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDR+
Sbjct: 272 GEHGDCYDRF 281


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd 1222)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 268 GRNGDCYDRY 277


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 269 GKNGDCYDRY 278


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 3   RGDCYDRY 10
           +GDCYDRY
Sbjct: 276 QGDCYDRY 283


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 274 GVNGDCYDRY 283


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 274 GVNGDCYDRY 283


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 274 GVNGDCYDRY 283


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 274 GVNGDCYDRY 283


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 291 GTCGDCYDRY 300


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 291 GTCGDCYDRY 300


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 291 GTCGDCYDRY 300


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1   GSRGDCYDRY 10
           G+ GDCYDRY
Sbjct: 291 GTCGDCYDRY 300


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 336 GINGDCYDRY 345


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   GSRGDCYDRY 10
           GS GDCY RY
Sbjct: 254 GSTGDCYARY 263


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   GSRGDCYDRY 10
           G  GDCYDRY
Sbjct: 273 GVGGDCYDRY 282


>sp|NUOCD_YERPY|NADH-QUINONE oxidoreductase subunit C/D|Yersinia pseudotuberculosis serotype O:3

Query: 1   GSRGDCYDR 9
           G+ GDCYDR
Sbjct: 456 GNNGDCYDR 464


>sp|NUOCD_YERPS|NADH-QUINONE oxidoreductase subunit C/D|Yersinia pseudotuberculosis serotype I

Query: 1   GSRGDCYDR 9
           G+ GDCYDR
Sbjct: 456 GNNGDCYDR 464


>sp|NUOCD_YERPP|NADH-QUINONE oxidoreductase subunit C/D|Yersinia pestis (strain Pestoides F)

Query: 1   GSRGDCYDR 9
           G+ GDCYDR
Sbjct: 456 GNNGDCYDR 464


>sp|NUOCD_YERPN|NADH-QUINONE oxidoreductase subunit C/D|Yersinia pestis bv. Antiqua (strain

Query: 1   GSRGDCYDR 9
           G+ GDCYDR
Sbjct: 456 GNNGDCYDR 464


>sp|NUOCD_YERPG|NADH-QUINONE oxidoreductase subunit C/D|Yersinia pestis bv. Antiqua (strain

Query: 1   GSRGDCYDR 9
           G+ GDCYDR
Sbjct: 456 GNNGDCYDR 464


>sp|NUOCD_YERPE|NADH-QUINONE oxidoreductase subunit C/D|Yersinia pestis

Query: 1   GSRGDCYDR 9
           G+ GDCYDR
Sbjct: 456 GNNGDCYDR 464


>sp|NUOCD_YERPB|NADH-QUINONE oxidoreductase subunit C/D|Yersinia pseudotuberculosis serotype IB

Query: 1   GSRGDCYDR 9
           G+ GDCYDR
Sbjct: 456 GNNGDCYDR 464


>sp|NUOCD_YERPA|NADH-QUINONE oxidoreductase subunit C/D|Yersinia pestis bv. Antiqua (strain

Query: 1   GSRGDCYDR 9
           G+ GDCYDR
Sbjct: 456 GNNGDCYDR 464


>sp|NUOCD_YERP3|NADH-QUINONE oxidoreductase subunit C/D|Yersinia pseudotuberculosis serotype

Query: 1   GSRGDCYDR 9
           G+ GDCYDR
Sbjct: 456 GNNGDCYDR 464


>sp|NUOCD_YERE8|NADH-QUINONE oxidoreductase subunit C/D|Yersinia enterocolitica serotype O:8 /

Query: 1   GSRGDCYDR 9
           G+ GDCYDR
Sbjct: 456 GNNGDCYDR 464


>sp|NUOCD_PHOLL|NADH-QUINONE oxidoreductase subunit C/D|Photorhabdus laumondii subsp. laumondii

Query: 1   GSRGDCYDR 9
           G+ GDCYDR
Sbjct: 457 GNNGDCYDR 465


>sp|NUOCD_METCA|NADH-QUINONE oxidoreductase subunit C/D|Methylococcus capsulatus (strain ATCC

Query: 1   GSRGDCYDR 9
           G+ GDCYDR
Sbjct: 445 GTNGDCYDR 453


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 1   GSRGDCYDRY 10
           G   DCYDRY
Sbjct: 250 GKNSDCYDRY 259


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 1   GSRGDCYDRY 10
           G   DCYDRY
Sbjct: 250 GKNSDCYDRY 259


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 1   GSRGDCYDRY 10
           G   DCYDRY
Sbjct: 250 GKNSDCYDRY 259


>sp|NUOD_BARBK|NADH-QUINONE oxidoreductase subunit D|Bartonella bacilliformis (strain ATCC

Query: 1   GSRGDCYDRY 10
           G   DCYDRY
Sbjct: 250 GKNSDCYDRY 259


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1   GSRGDCYDRY 10
           G  GDC+DRY
Sbjct: 250 GKNGDCFDRY 259


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   GSRGDCYDRY 10
           G+RGD YDRY
Sbjct: 252 GTRGDRYDRY 261


>sp|NUOD1_ANADF|NADH-QUINONE oxidoreductase subunit D 1|Anaeromyxobacter sp. (strain Fw109-5)

Query: 1   GSRGDCYDRY 10
           G+ GDC+DRY
Sbjct: 262 GTVGDCFDRY 271


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1   GSRGDCYDRY 10
           G  GDC+DRY
Sbjct: 250 GKNGDCFDRY 259


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1   GSRGDCYDRY 10
           G+ GDCY RY
Sbjct: 273 GTAGDCYSRY 282


>sp|NUOCD_SULSY|NADH-QUINONE oxidoreductase subunit C/D|Sulfurihydrogenibium sp. (strain

Query: 1   GSRGDCYDRY 10
           G +GD YDRY
Sbjct: 443 GEKGDSYDRY 452


>sp|NUOD_CARHZ|NADH-QUINONE oxidoreductase subunit D|Carboxydothermus hydrogenoformans (strain

Query: 1   GSRGDCYDRY 10
           G+ GDC+DR+
Sbjct: 248 GANGDCWDRF 257


>sp|NUOD2_THEYD|NADH-QUINONE oxidoreductase subunit D 2|Thermodesulfovibrio yellowstonii (strain

Query: 1   GSRGDCYDRY 10
           G +GD YDRY
Sbjct: 255 GEKGDTYDRY 264


>sp|NUOCD_RHOP2|NADH-QUINONE oxidoreductase subunit C/D|Rhodopseudomonas palustris (strain HaA2)

Query: 1   GSRGDCYDR 9
           G  GDCYDR
Sbjct: 439 GHNGDCYDR 447


>sp|NUOCD_PROMH|NADH-QUINONE oxidoreductase subunit C/D|Proteus mirabilis (strain HI4320)

Query: 1   GSRGDCYDR 9
            S GDCYDR
Sbjct: 456 ASNGDCYDR 464


>sp|NUOCD_RHOP5|NADH-QUINONE oxidoreductase subunit C/D|Rhodopseudomonas palustris (strain

Query: 1   GSRGDCYDR 9
           G+ GDCYDR
Sbjct: 439 GNNGDCYDR 447


>sp|NUOCD_EDWI9|NADH-QUINONE oxidoreductase subunit C/D|Edwardsiella ictaluri (strain 93-146)

Query: 1   GSRGDCYDR 9
            S GDCYDR
Sbjct: 456 ASNGDCYDR 464


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain HTCC2594)

Query: 1   GSRGDCYDRY 10
           G+  DCYDR+
Sbjct: 261 GTNSDCYDRF 270


>sp|NUOCD_NITMU|NADH-QUINONE oxidoreductase subunit C/D|Nitrosospira multiformis (strain ATCC

Query: 1   GSRGDCYDR 9
           G  GDCYDR
Sbjct: 466 GQHGDCYDR 474


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   GSRGDCYDRY 10
           GS GD YDRY
Sbjct: 246 GSCGDSYDRY 255


>sp|NUOCD_RHOPT|NADH-QUINONE oxidoreductase subunit C/D|Rhodopseudomonas palustris (strain

Query: 1   GSRGDCYDR 9
           G  GDCYDR
Sbjct: 439 GHAGDCYDR 447


>sp|NUOCD_RHOPA|NADH-QUINONE oxidoreductase subunit C/D|Rhodopseudomonas palustris (strain ATCC

Query: 1   GSRGDCYDR 9
           G  GDCYDR
Sbjct: 439 GHAGDCYDR 447


>sp|NUOCD_BDEBA|NADH-QUINONE oxidoreductase subunit C/D|Bdellovibrio bacteriovorus (strain ATCC

Query: 1   GSRGDCYDRY 10
           G+ GD YDRY
Sbjct: 418 GTNGDIYDRY 427




66|Sequence|326|335|CYDRYLCRVE

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   CYDRYLCRVE 10
           CYDRYLCRVE
Sbjct: 326 CYDRYLCRVE 335


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   CYDRYLCRVE 10
           CYDRYLCRVE
Sbjct: 326 CYDRYLCRVE 335


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   CYDRYLCRVE 10
           CYDRYLCRVE
Sbjct: 326 CYDRYLCRVE 335


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   CYDRYLCRVE 10
           CYDRYLCRVE
Sbjct: 326 CYDRYLCRVE 335


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   CYDRYLCRVE 10
           CYDRYLCRVE
Sbjct: 326 CYDRYLCRVE 335


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   CYDRYLCRVE 10
           CYDRYLCRVE
Sbjct: 326 CYDRYLCRVE 335


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   CYDRYLCRVE 10
           CYDRYLCRVE
Sbjct: 326 CYDRYLCRVE 335


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 345 CYDRYLCRIE 354


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   CYDRYLCRVE 10
           CYDRYLCRVE
Sbjct: 261 CYDRYLCRVE 270


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 279 CYDRYLCRME 288


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 279 CYDRYLCRME 288


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 279 CYDRYLCRME 288


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 279 CYDRYLCRME 288


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 279 CYDRYLCRME 288


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 279 CYDRYLCRME 288


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 341 CYDRYLCRME 350


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   CYDRYLCRVE 10
           C+DRYLCR+E
Sbjct: 254 CFDRYLCRIE 263


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 278 CYDRYLCRME 287


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1   CYDRYLCRV 9
           CYDRYLCRV
Sbjct: 296 CYDRYLCRV 304


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1   CYDRYLCRV 9
           CYDRYLCRV
Sbjct: 296 CYDRYLCRV 304


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1   CYDRYLCRVE 10
           CYDRYLCR++
Sbjct: 277 CYDRYLCRMQ 286


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   CYDRYLCRV 9
           CYDRYLCRV
Sbjct: 297 CYDRYLCRV 305


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC 19089

Query: 1   CYDRYLCRVE 10
           CYDRYLCR++
Sbjct: 259 CYDRYLCRMQ 268


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1   CYDRYLCRV 9
           CYDRYLCRV
Sbjct: 296 CYDRYLCRV 304


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1   CYDRYLCRV 9
           CYDRYLCRV
Sbjct: 296 CYDRYLCRV 304


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 261 CYDRYLARVE 270


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain LB400)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain DSM

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 263 CYDRYLVRVE 272


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain K96243)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 259 CYDRYLIRVE 268


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 278 CYDRYLVRIE 287


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 278 CYDRYLVRIE 287


>sp|NUCD1_AQUAE|NADH-QUINONE oxidoreductase subunit C/D 1|Aquifex aeolicus (strain VF5)

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 467 CYDRYLVRIE 476


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 278 CYDRYLVRIE 287


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 278 CYDRYLVRIE 287


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 278 CYDRYLVRIE 287


>sp|NUOCD_HYDS0|NADH-QUINONE oxidoreductase subunit C/D|Hydrogenobaculum sp. (strain Y04AAS1)

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 444 CYDRYLVRIE 453


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 278 CYDRYLVRIE 287


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 261 CYDRYLCRME 270


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 267 CYDRYLCRME 276


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17025

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 264 CYDRYLCRME 273


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17023

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 266 CYDRYLCRME 275


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17029

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 264 CYDRYLCRME 273


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain DS-1

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 255 CYDRYLCRME 264


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   CYDRYLCRVE 10
           CYDRYLCR+E
Sbjct: 278 CYDRYLCRME 287


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 278 CYDRYLVRIE 287


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 259 CYDRYLIRIE 268


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 259 CYDRYLIRIE 268


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 267 CYDRYLVRME 276


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 257 CYDRYLIRME 266


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 257 CYDRYLIRME 266


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_BARBK|NADH-QUINONE oxidoreductase subunit D|Bartonella bacilliformis (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisA53)

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLLRME 264


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 278 CYDRYLVRME 287


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   CYDRYLCRVE 10
           CYDRYL RV+
Sbjct: 278 CYDRYLVRVQ 287


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040) (Silicibacter

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 265 CYDRYLVRME 274


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   CYDRYLCRVE 10
           CYDRYL RV+
Sbjct: 263 CYDRYLIRVQ 272


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain EF01-2)

Query: 1   CYDRYLCRVE 10
           CYDRYL RV+
Sbjct: 278 CYDRYLVRVQ 287


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 261 CYDRYLIRME 270


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 253 CYDRYLVRME 262


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 261 CYDRYLIRME 270


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain JCM

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 257 CYDRYLIRME 266


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain CJ2)

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 278 CYDRYLVRV 286


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 278 CYDRYLVRV 286


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1   CYDRYLCRVE 10
           CYDRYLCR++
Sbjct: 272 CYDRYLCRMQ 281


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 296 CYDRYLVRV 304


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 279 CYDRYLIRV 287


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 264 CYDRYLIRV 272


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 296 CYDRYLVRV 304


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 296 CYDRYLVRV 304


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 296 CYDRYLVRV 304


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 296 CYDRYLVRV 304


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 279 CYDRYLVRV 287


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 279 CYDRYLVRV 287


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 279 CYDRYLVRV 287


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   CYDRYLCRVE 10
           CYDR++ RVE
Sbjct: 268 CYDRFMVRVE 277


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC 49405

Query: 1   CYDRYLCRVE 10
           CYDRY  RVE
Sbjct: 264 CYDRYCIRVE 273


>sp|NUOD2_THEYD|NADH-QUINONE oxidoreductase subunit D 2|Thermodesulfovibrio yellowstonii (strain

Query: 2   YDRYLCRV 9
           YDRYLCR+
Sbjct: 261 YDRYLCRI 268


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp. pneumophila

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1   CYDRYLCRVE 10
           CYDRYL RVE
Sbjct: 278 CYDRYLVRVE 287


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 279 CYDRYLVRV 287


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 296 CYDRYLVRV 304


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1   CYDRYLCRVE 10
           CY RYL RVE
Sbjct: 278 CYSRYLVRVE 287


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 296 CYDRYLVRV 304


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 296 CYDRYLVRV 304


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 296 CYDRYLVRV 304


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 252 CYDRYLVRI 260


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 252 CYDRYLVRI 260


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 254 CYDRYLVRI 262


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   CYDRYLCRVE 10
           CYDR++ RVE
Sbjct: 266 CYDRFMVRVE 275


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 278 CYDRYLVRV 286


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 296 CYDRYLVRI 304


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   CYDRYLCRVE 10
           CYDRYL R++
Sbjct: 261 CYDRYLIRMQ 270


>sp|NUOD_METI4|NADH-QUINONE oxidoreductase subunit D|Methylacidiphilum infernorum (isolate V4)

Query: 1   CYDRYLCRVE 10
           C+DRY+ R+E
Sbjct: 281 CFDRYMVRIE 290


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 1   CYDRYLCRV 9
           CYDRYLCR+
Sbjct: 273 CYDRYLCRM 281


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd 1222)

Query: 1   CYDRYLCRV 9
           CYDRYLCR+
Sbjct: 273 CYDRYLCRM 281


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1   CYDRYLCRV 9
           CYDRYLCR+
Sbjct: 274 CYDRYLCRM 282


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 278 CYDRYLVRIE 287


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 278 CYDRYLVRIE 287


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 278 CYDRYLVRIE 287


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 278 CYDRYLVRIE 287


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 278 CYDRYLVRIE 287


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 278 CYDRYLVRIE 287


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1   CYDRYLCRVE 10
           CYDRYL R++
Sbjct: 266 CYDRYLVRMQ 275


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 279 CYDRYLVRI 287


>sp|NUOD1_OPITP|NADH-QUINONE oxidoreductase subunit D 1|Opitutus terrae (strain DSM 11246

Query: 1   CYDRYLCRVE 10
           CYDRYL R E
Sbjct: 288 CYDRYLVRGE 297


>sp|NUOD_NOCFA|NADH-QUINONE oxidoreductase subunit D|Nocardia farcinica (strain IFM 10152)

Query: 1   CYDRYLCRVE 10
           CY RYL RVE
Sbjct: 300 CYGRYLIRVE 309


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM 17343

Query: 1   CYDRYLCRVE 10
           CY RYL RVE
Sbjct: 278 CYARYLVRVE 287


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP 134

Query: 1   CYDRYLCRVE 10
           CY RYL RVE
Sbjct: 278 CYARYLVRVE 287


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 1   CYDRYLCRVE 10
           CY RYL RVE
Sbjct: 278 CYARYLVRVE 287


>sp|NUBCD_SYNFM|NADH-QUINONE oxidoreductase subunit B/C/D|Syntrophobacter fumaroxidans (strain

Query: 1   CYDRYLCRVE 10
           CY RYL RVE
Sbjct: 650 CYARYLVRVE 659


>sp|NUOCD_RHOP5|NADH-QUINONE oxidoreductase subunit C/D|Rhodopseudomonas palustris (strain

Query: 1   CYDRYLCRVE 10
           CYDR L RVE
Sbjct: 444 CYDRVLVRVE 453


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 254 CYDRYLVRM 262


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 254 CYDRYLVRM 262


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 273 CYDRYLVRM 281


>sp|NUOD1_HERA2|NADH-QUINONE oxidoreductase subunit D 1|Herpetosiphon aurantiacus (strain ATCC

Query: 2   YDRYLCRVE 10
           YDRY CRV+
Sbjct: 283 YDRYRCRVQ 291


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG 29417

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLVRME 264


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 255 CYDRYLVRM 263


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLVRME 264


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 278 CYDRYLVRM 286


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 253 CYDRYLVRM 261


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 278 CYDRYLVRM 286


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 278 CYDRYLVRM 286


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 278 CYDRYLVRM 286


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 278 CYDRYLVRM 286


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. mediasiatica

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 278 CYDRYLVRM 286


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 278 CYDRYLVRM 286


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 278 CYDRYLVRM 286


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 278 CYDRYLVRM 286


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1   CYDRYLCRVE 10
           CYDRYL R+E
Sbjct: 255 CYDRYLIRME 264


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 256 CYDRYLVRM 264


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 253 CYDRYLVRM 261


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 256 CYDRYLVRM 264


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 261 CYDRYLVRM 269


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 256 CYDRYLVRM 264


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB18)

Query: 1   CYDRYLCRVE 10
           CYDRY  R+E
Sbjct: 255 CYDRYCIRME 264


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   CYDRYLCRV 9
           CYDRYL R+
Sbjct: 256 CYDRYLVRM 264


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1   CYDRYLCRV 9
           CYDRYL RV
Sbjct: 278 CYDRYLVRV 286




67|Sequence|331|340|LCRVEEMRQS

>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   LCRVEEMRQS 10
           LCRVEEMRQS
Sbjct: 331 LCRVEEMRQS 340


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   LCRVEEMRQS 10
           LCRVEEMRQS
Sbjct: 331 LCRVEEMRQS 340


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   LCRVEEMRQS 10
           LCR+EEMRQS
Sbjct: 350 LCRIEEMRQS 359


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   LCRVEEMRQS 10
           LCRVEEMRQS
Sbjct: 331 LCRVEEMRQS 340


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   LCRVEEMRQS 10
           LCRVEEMRQS
Sbjct: 331 LCRVEEMRQS 340


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   LCRVEEMRQS 10
           LCRVEEMRQS
Sbjct: 331 LCRVEEMRQS 340


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   LCRVEEMRQS 10
           LCRVEEMRQS
Sbjct: 331 LCRVEEMRQS 340


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   LCRVEEMRQS 10
           LCRVEEMRQS
Sbjct: 331 LCRVEEMRQS 340


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   LCRVEEMRQS 10
           LCR+EEMRQS
Sbjct: 284 LCRMEEMRQS 293


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   LCRVEEMRQS 10
           LCR+EEMRQS
Sbjct: 284 LCRMEEMRQS 293


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   LCRVEEMRQS 10
           LCR+EEMRQS
Sbjct: 284 LCRMEEMRQS 293


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   LCRVEEMRQS 10
           LCR+EEMRQS
Sbjct: 284 LCRMEEMRQS 293


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   LCRVEEMRQS 10
           LCR+EEMRQS
Sbjct: 284 LCRMEEMRQS 293


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   LCRVEEMRQS 10
           LCR+EEMRQS
Sbjct: 283 LCRMEEMRQS 292


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   LCRVEEMRQS 10
           LCR+EEMRQS
Sbjct: 284 LCRMEEMRQS 293


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   LCRVEEMRQS 10
           LCRVEEMRQS
Sbjct: 266 LCRVEEMRQS 275


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   LCRVEEMRQS 10
           LCR+EEMRQS
Sbjct: 283 LCRMEEMRQS 292


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   LCRVEEMRQS 10
           LCR+EEMR+S
Sbjct: 259 LCRIEEMRES 268


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1   LCRVEEMRQS 10
           LCR+EEMRQS
Sbjct: 272 LCRMEEMRQS 281


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17025

Query: 1   LCRVEEMRQS 10
           LCR+EEMRQS
Sbjct: 269 LCRMEEMRQS 278


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17023

Query: 1   LCRVEEMRQS 10
           LCR+EEMRQS
Sbjct: 271 LCRMEEMRQS 280


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17029

Query: 1   LCRVEEMRQS 10
           LCR+EEMRQS
Sbjct: 269 LCRMEEMRQS 278


>sp|NUOCD_ALIB4|NADH-QUINONE oxidoreductase subunit C/D|Aliarcobacter butzleri (strain RM4018)

Query: 1   LCRVEEMRQS 10
           +CR EEMRQS
Sbjct: 412 MCRFEEMRQS 421


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain DS-1

Query: 1   LCRVEEMRQS 10
           LCR+EEMRQS
Sbjct: 260 LCRMEEMRQS 269


>sp|NUOD2_THEYD|NADH-QUINONE oxidoreductase subunit D 2|Thermodesulfovibrio yellowstonii (strain

Query: 1   LCRVEEMRQS 10
           LCR+ EMRQS
Sbjct: 265 LCRIREMRQS 274


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   LCRVEEMRQS 10
           LCR+EEMR+S
Sbjct: 266 LCRMEEMRES 275


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   LCRVEEMRQS 10
           LCR+EE RQS
Sbjct: 346 LCRMEEFRQS 355


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   LCRVEEMRQS 10
           LCRV EMRQS
Sbjct: 302 LCRVAEMRQS 311


>sp|NUOD2_SINMW|NADH-QUINONE oxidoreductase subunit D 2|Sinorhizobium medicae (strain WSM419)

Query: 1   LCRVEEMRQS 10
           LCRV+EMR+S
Sbjct: 271 LCRVDEMRES 280


>sp|NUOD2_RHIME|NADH-QUINONE oxidoreductase subunit D 2|Rhizobium meliloti (strain 1021)

Query: 1   LCRVEEMRQS 10
           LCRV+EMR+S
Sbjct: 271 LCRVDEMRES 280




68|Sequence|336|345|EMRQSLRIIA

>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   EMRQSLRIIA 10
           EMRQSLRIIA
Sbjct: 336 EMRQSLRIIA 345


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   EMRQSLRIIA 10
           EMRQSLRIIA
Sbjct: 336 EMRQSLRIIA 345


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   EMRQSLRIIA 10
           EMRQSLRIIA
Sbjct: 336 EMRQSLRIIA 345


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   EMRQSLRIIA 10
           EMRQSLRIIA
Sbjct: 336 EMRQSLRIIA 345




69|Sequence|341|350|LRIIAQCLNK

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   LRIIAQCLNK 10
           LRIIAQCLNK
Sbjct: 341 LRIIAQCLNK 350


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   LRIIAQCLNK 10
           LRIIAQCLNK
Sbjct: 341 LRIIAQCLNK 350


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   LRIIAQCLNK 10
           LRIIAQCLNK
Sbjct: 341 LRIIAQCLNK 350


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   LRIIAQCLNK 10
           LRIIAQCLNK
Sbjct: 341 LRIIAQCLNK 350


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   LRIIAQCLNK 10
           LRII QCLNK
Sbjct: 341 LRIIEQCLNK 350


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   LRIIAQCLNK 10
           LRII QCLNK
Sbjct: 341 LRIIEQCLNK 350


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   LRIIAQCLNK 10
           +RII+QCLNK
Sbjct: 341 IRIISQCLNK 350


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   LRIIAQCLNK 10
           LRII QCLNK
Sbjct: 356 LRIIHQCLNK 365




70|Sequence|346|355|QCLNKMPPGE

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   QCLNKMPPGE 10
           QCLNKMPPGE
Sbjct: 346 QCLNKMPPGE 355


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   QCLNKMPPGE 10
           QCLNKMPPGE
Sbjct: 346 QCLNKMPPGE 355


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   QCLNKMPPGE 10
           QCLNKMPPGE
Sbjct: 346 QCLNKMPPGE 355


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   QCLNKMPPGE 10
           QCLNKMPPGE
Sbjct: 346 QCLNKMPPGE 355


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   QCLNKMPPGE 10
           QCLNKMPPGE
Sbjct: 346 QCLNKMPPGE 355


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   QCLNKMPPGE 10
           QCLNKMPPGE
Sbjct: 346 QCLNKMPPGE 355


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   QCLNKMPPGE 10
           QCLNKMPPGE
Sbjct: 346 QCLNKMPPGE 355


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   QCLNKMPPGE 10
           QCLNKMP GE
Sbjct: 365 QCLNKMPAGE 374


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   QCLNKMPPG 9
           QCLNKMP G
Sbjct: 279 QCLNKMPTG 287


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   QCLNKMPPG 9
           QCLNKMP G
Sbjct: 361 QCLNKMPAG 369


>sp|NUOCD_ACICJ|NADH-QUINONE oxidoreductase subunit C/D|Acidiphilium cryptum (strain JF-5)

Query: 1   QCLNKMPPG 9
           QCL+ MPPG
Sbjct: 475 QCLDNMPPG 483


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   QCLNKMPPG 9
           QCLNKMP G
Sbjct: 281 QCLNKMPRG 289


>sp|NUOCD_SHEWM|NADH-QUINONE oxidoreductase subunit C/D|Shewanella woodyi (strain ATCC 51908

Query: 1   QCLNKMPPGE 10
           QC+N MP GE
Sbjct: 482 QCINNMPEGE 491


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   QCLNKMPPGE 10
           QC+ KMP GE
Sbjct: 279 QCIQKMPAGE 288


>sp|NUOD_RUBXD|NADH-QUINONE oxidoreductase subunit D|Rubrobacter xylanophilus (strain DSM 9941

Query: 1   QCLNKMPPGE 10
           QCL KMP GE
Sbjct: 304 QCLEKMPEGE 313




71|Sequence|351|360|MPPGEIKVDD

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   MPPGEIKVDD 10
           MPPGEIKVDD
Sbjct: 351 MPPGEIKVDD 360


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   MPPGEIKVDD 10
           MPPGEIKVDD
Sbjct: 351 MPPGEIKVDD 360


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   MPPGEIKVDD 10
           MPPGEIKVDD
Sbjct: 351 MPPGEIKVDD 360


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   MPPGEIKVDD 10
           MPPGEIKVDD
Sbjct: 351 MPPGEIKVDD 360


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   MPPGEIKVDD 10
           MPPGEIKVDD
Sbjct: 351 MPPGEIKVDD 360


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   MPPGEIKVDD 10
           MPPGEIKVDD
Sbjct: 351 MPPGEIKVDD 360


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   MPPGEIKVDD 10
           MPPGEIKVDD
Sbjct: 351 MPPGEIKVDD 360


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   MPPGEIKVDD 10
           MP GEIKVDD
Sbjct: 370 MPAGEIKVDD 379




72|Sequence|356|365|IKVDDAKVSP

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   IKVDDAKVSP 10
           IKVDDAKVSP
Sbjct: 356 IKVDDAKVSP 365


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   IKVDDAKVSP 10
           IKVDDAKVSP
Sbjct: 356 IKVDDAKVSP 365


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   IKVDDAKVSP 10
           IKVDDAKVSP
Sbjct: 356 IKVDDAKVSP 365


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   IKVDDAKVSP 10
           IKVDDAKVSP
Sbjct: 356 IKVDDAKVSP 365


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   IKVDDAKVSP 10
           IKVDDAKVSP
Sbjct: 356 IKVDDAKVSP 365


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   IKVDDAKVSP 10
           IKVDDAKVSP
Sbjct: 356 IKVDDAKVSP 365


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   IKVDDAKVSP 10
           IKVDDAKVSP
Sbjct: 356 IKVDDAKVSP 365


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   IKVDDAKVSP 10
           +K+DDAK+SP
Sbjct: 291 VKIDDAKISP 300


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   IKVDDAKVSP 10
           IKVDD K+SP
Sbjct: 289 IKVDDKKISP 298




73|Sequence|361|370|AKVSPPKRAE

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   AKVSPPKRAE 10
           AKVSPPKRAE
Sbjct: 361 AKVSPPKRAE 370


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   AKVSPPKRAE 10
           AKVSPPKRAE
Sbjct: 361 AKVSPPKRAE 370


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   AKVSPPKRAE 10
           AKVSPPKRAE
Sbjct: 361 AKVSPPKRAE 370


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   AKVSPPKRAE 10
           AKVSPPKRAE
Sbjct: 361 AKVSPPKRAE 370


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   AKVSPPKRAE 10
           AKVSPPKRAE
Sbjct: 361 AKVSPPKRAE 370


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   AKVSPPKRAE 10
           AKVSPPKRAE
Sbjct: 361 AKVSPPKRAE 370


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   AKVSPPKRAE 10
           AKVSPPKRAE
Sbjct: 361 AKVSPPKRAE 370




74|Sequence|366|375|PKRAEMKTSM

>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1   PKRAEMKTSM 10
           PKRAEMKTSM
Sbjct: 316 PKRAEMKTSM 325


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   PKRAEMKTSM 10
           PKRAEMKTSM
Sbjct: 366 PKRAEMKTSM 375


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   PKRAEMKTSM 10
           PKRAEMKTSM
Sbjct: 366 PKRAEMKTSM 375


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   PKRAEMKTSM 10
           PKRAEMKTSM
Sbjct: 366 PKRAEMKTSM 375


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1   PKRAEMKTSM 10
           PKR+EMKTSM
Sbjct: 295 PKRSEMKTSM 304


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   PKRAEMKTSM 10
           PKRAEMKTSM
Sbjct: 366 PKRAEMKTSM 375


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   PKRAEMKTSM 10
           PKRAEMKTSM
Sbjct: 366 PKRAEMKTSM 375


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   PKRAEMKTSM 10
           PKRAEMKTSM
Sbjct: 366 PKRAEMKTSM 375


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   PKRAEMKTSM 10
           PKRAEMKTSM
Sbjct: 366 PKRAEMKTSM 375


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17025

Query: 1   PKRAEMKTSM 10
           P RAEMKTSM
Sbjct: 305 PPRAEMKTSM 314


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   PKRAEMKTSM 10
           P RAEMKTSM
Sbjct: 291 PSRAEMKTSM 300


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1   PKRAEMKTSM 10
           PKR +MKTSM
Sbjct: 308 PKRGDMKTSM 317


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040) (Silicibacter

Query: 1   PKRAEMKTSM 10
           PKR +MKTSM
Sbjct: 306 PKRGDMKTSM 315


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 1   PKRAEMKTSM 10
           PKR+EMK+SM
Sbjct: 299 PKRSEMKSSM 308


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   PKRAEMKTSM 10
           PKRAEMK SM
Sbjct: 306 PKRAEMKQSM 315


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1   PKRAEMKTSM 10
           PKRAEMK SM
Sbjct: 309 PKRAEMKRSM 318


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 1   PKRAEMKTSM 10
           PKR+EMK+SM
Sbjct: 299 PKRSEMKSSM 308




75|Sequence|371|380|MKTSMESLIH

>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040) (Silicibacter

Query: 1   MKTSMESLIH 10
           MKTSMESLIH
Sbjct: 311 MKTSMESLIH 320


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1   MKTSMESLIH 10
           MKTSMESLIH
Sbjct: 313 MKTSMESLIH 322


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1   MKTSMESLIH 10
           MKTSMESLIH
Sbjct: 315 MKTSMESLIH 324


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1   MKTSMESLIH 10
           MKTSMESLIH
Sbjct: 300 MKTSMESLIH 309


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   MKTSMESLIH 10
           MKTSMESLIH
Sbjct: 371 MKTSMESLIH 380


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   MKTSMESLIH 10
           MKTSMESLIH
Sbjct: 371 MKTSMESLIH 380


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   MKTSMESLIH 10
           MKTSMESLIH
Sbjct: 371 MKTSMESLIH 380


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   MKTSMESLIH 10
           MKTSMESLIH
Sbjct: 371 MKTSMESLIH 380


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   MKTSMESLIH 10
           MKTSMESLIH
Sbjct: 371 MKTSMESLIH 380


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   MKTSMESLIH 10
           MKTSMESLIH
Sbjct: 371 MKTSMESLIH 380


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   MKTSMESLIH 10
           MKTSMESLIH
Sbjct: 371 MKTSMESLIH 380


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1   MKTSMESLIH 10
           MKTSME+LIH
Sbjct: 321 MKTSMEALIH 330


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1   MKTSMESLIH 10
           MKTSME+LIH
Sbjct: 320 MKTSMEALIH 329


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1   MKTSMESLIH 10
           MKTSME+LIH
Sbjct: 312 MKTSMEALIH 321


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17025

Query: 1   MKTSMESLIH 10
           MKTSME+LIH
Sbjct: 310 MKTSMEALIH 319


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17023

Query: 1   MKTSMESLIH 10
           MKTSME+LIH
Sbjct: 312 MKTSMEALIH 321


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17029

Query: 1   MKTSMESLIH 10
           MKTSME+LIH
Sbjct: 310 MKTSMEALIH 319


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1   MKTSMESLIH 10
           MKTSME+LIH
Sbjct: 325 MKTSMEALIH 334


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   MKTSMESLIH 10
           MKTSME+LIH
Sbjct: 296 MKTSMEALIH 305


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB5)

Query: 1   MKTSMESLIH 10
           MK SMESLIH
Sbjct: 324 MKRSMESLIH 333


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB18)

Query: 1   MKTSMESLIH 10
           MK SMESLIH
Sbjct: 304 MKRSMESLIH 313


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1   MKTSMESLIH 10
           MK SMESLIH
Sbjct: 309 MKRSMESLIH 318


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   MKTSMESLIH 10
           MK SMESLIH
Sbjct: 306 MKRSMESLIH 315


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1   MKTSMESLIH 10
           MK SMESLIH
Sbjct: 304 MKRSMESLIH 313


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   MKTSMESLIH 10
           MKTSME LIH
Sbjct: 325 MKTSMEELIH 334


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   MKTSMESLIH 10
           MK SMESLIH
Sbjct: 313 MKQSMESLIH 322


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   MKTSMESLIH 10
           MK SMESLIH
Sbjct: 302 MKLSMESLIH 311


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   MKTSMESLIH 10
           MK SMESLIH
Sbjct: 308 MKQSMESLIH 317


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   MKTSMESLIH 10
           MK SMESLIH
Sbjct: 306 MKQSMESLIH 315




76|Sequence|376|385|ESLIHHFKLY

>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB5)

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 329 ESLIHHFKLY 338


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB18)

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 309 ESLIHHFKLY 318


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 314 ESLIHHFKLY 323


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd 1222)

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 325 ESLIHHFKLY 334


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 325 ESLIHHFKLY 334


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 376 ESLIHHFKLY 385


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 376 ESLIHHFKLY 385


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 376 ESLIHHFKLY 385


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 376 ESLIHHFKLY 385


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 376 ESLIHHFKLY 385


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 376 ESLIHHFKLY 385


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 376 ESLIHHFKLY 385


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 311 ESLIHHFKLY 320


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040) (Silicibacter

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 316 ESLIHHFKLY 325


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 318 ESLIHHFKLY 327


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 318 ESLIHHFKLY 327


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 309 ESLIHHFKLY 318


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 320 ESLIHHFKLY 329


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 326 EALIHHFKLY 335


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG 29417

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 324 EALIHHFKLY 333


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 329 EALIHHFKLY 338


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC 49405

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 318 EALIHHFKLY 327


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 315 EALIHHFKLY 324


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 315 EALIHHFKLY 324


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC 19089

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 311 EALIHHFKLY 320


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisA53)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 311 EALIHHFKLY 320


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 311 EALIHHFKLY 320


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain JCM

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 311 EALIHHFKLY 320


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 305 EALIHHFKLY 314


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 311 ESLIHHFKLY 320


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_BARBK|NADH-QUINONE oxidoreductase subunit D|Bartonella bacilliformis (strain ATCC

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC BAA-705

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 325 EALIHHFKLY 334


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1   ESLIHHFKLY 10
           ESLIHHFKL+
Sbjct: 330 ESLIHHFKLF 339


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 315 EALIHHFKLY 324


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 319 EALIHHFKLY 328


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 317 EALIHHFKLY 326


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17025

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 315 EALIHHFKLY 324


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 315 EALIHHFKLY 324


>sp|NUOD2_CHLAA|NADH-QUINONE oxidoreductase subunit D 2|Chloroflexus aurantiacus (strain ATCC

Query: 1   ESLIHHFKLY 10
           ESLIHHFKL+
Sbjct: 324 ESLIHHFKLW 333


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain TIE-1)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 315 EALIHHFKLY 324


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17023

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 317 EALIHHFKLY 326


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 306 EALIHHFKLY 315


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17029

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 315 EALIHHFKLY 324


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1   ESLIHHFKLY 10
           ESLIHHFKL+
Sbjct: 305 ESLIHHFKLF 314


>sp|NUOD1_HERA2|NADH-QUINONE oxidoreductase subunit D 1|Herpetosiphon aurantiacus (strain ATCC

Query: 1   ESLIHHFKLY 10
           ESLIHHFKL+
Sbjct: 335 ESLIHHFKLW 344


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 316 EALIHHFKLY 325


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 313 EALIHHFKLY 322


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 306 EALIHHFKLY 315


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain HTCC2594)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 316 EALIHHFKLY 325


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 315 EALIHHFKLY 324


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 309 EALIHHFKLY 318


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 306 EALIHHFKLY 315


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   ESLIHHFKLY 10
           ESLIHHFKL+
Sbjct: 330 ESLIHHFKLF 339


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   ESLIHHFKLY 10
           ESLIHHFKLY
Sbjct: 314 ESLIHHFKLY 323


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   ESLIHHFKLY 10
           ESLIHHF+LY
Sbjct: 307 ESLIHHFELY 316


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 306 EALIHHFKLY 315


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 319 EALIHHFKLY 328


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 303 EALIHHFKLY 312


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 348 EALIHHFKLF 357


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 348 EALIHHFKLF 357


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 348 EALIHHFKLF 357


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 348 EALIHHFKLF 357


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 348 EALIHHFKLF 357


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 348 EALIHHFKLF 357


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 348 EALIHHFKLF 357


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 348 EALIHHFKLF 357


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 349 EALIHHFKLF 358


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 348 EALIHHFKLF 357


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 348 EALIHHFKLF 357


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 303 EALIHHFKLY 312


>sp|NUOD_SACEN|NADH-QUINONE oxidoreductase subunit D|Saccharopolyspora erythraea (strain ATCC

Query: 1   ESLIHHFKL 9
           ESLIHHFKL
Sbjct: 362 ESLIHHFKL 370


>sp|NUOD_RHOJR|NADH-QUINONE oxidoreductase subunit D|Rhodococcus jostii (strain RHA1)

Query: 1   ESLIHHFKL 9
           ESLIHHFKL
Sbjct: 351 ESLIHHFKL 359


>sp|NUOD1_SALTO|NADH-QUINONE oxidoreductase subunit D 1|Salinispora tropica (strain ATCC BAA-916

Query: 1   ESLIHHFKL 9
           ESLIHHFKL
Sbjct: 354 ESLIHHFKL 362


>sp|NUOD1_SALAI|NADH-QUINONE oxidoreductase subunit D 1|Salinispora arenicola (strain CNS-205)

Query: 1   ESLIHHFKL 9
           ESLIHHFKL
Sbjct: 354 ESLIHHFKL 362


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   ESLIHHFKLY 10
           ESLIHHFK Y
Sbjct: 313 ESLIHHFKFY 322


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 348 EALIHHFKLF 357


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 348 EALIHHFKLF 357


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 330 EALIHHFKLF 339


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain DS-1

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 305 EALIHHFKLY 314


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1   ESLIHHFKLY 10
           E++IHHFKLY
Sbjct: 304 EAMIHHFKLY 313


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1   ESLIHHFKLY 10
           E++IHHFKLY
Sbjct: 304 EAMIHHFKLY 313


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1   ESLIHHFKLY 10
           ESLIHHFKL+
Sbjct: 330 ESLIHHFKLF 339


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1   ESLIHHFKLY 10
           ESLIHHFKL+
Sbjct: 330 ESLIHHFKLF 339


>sp|NUOD2_ROSS1|NADH-QUINONE oxidoreductase subunit D 2|Roseiflexus sp. (strain RS-1)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 330 EALIHHFKLW 339


>sp|NUOD1_ROSCS|NADH-QUINONE oxidoreductase subunit D 1|Roseiflexus castenholzii (strain DSM

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 330 EALIHHFKLW 339


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1   ESLIHHFKLY 10
           E++IHHFKLY
Sbjct: 302 EAMIHHFKLY 311


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   ESLIHHFKLY 10
           E+LIHHFKLY
Sbjct: 301 EALIHHFKLY 310


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 329 EALIHHFKLF 338


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1   ESLIHHFKLY 10
           E++IHHFKLY
Sbjct: 302 EAMIHHFKLY 311


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1   ESLIHHFKLY 10
           E++IHHFKLY
Sbjct: 304 EAMIHHFKLY 313


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 311 EALIHHFKLF 320


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   ESLIHHFKLY 10
           ESLIHHFK +
Sbjct: 395 ESLIHHFKFF 404


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   ESLIHHFKLY 10
           ESLIHHFKL+
Sbjct: 311 ESLIHHFKLF 320


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1   ESLIHHFKLY 10
           E++IHHFKLY
Sbjct: 304 EAMIHHFKLY 313


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1   ESLIHHFKLY 10
           E++IHHFKLY
Sbjct: 304 EAMIHHFKLY 313


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1   ESLIHHFKLY 10
           E++IHHFKLY
Sbjct: 304 EAMIHHFKLY 313


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1   ESLIHHFKLY 10
           E++IHHFKLY
Sbjct: 304 EAMIHHFKLY 313


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   ESLIHHFKLY 10
           E++IHHFKLY
Sbjct: 303 EAMIHHFKLY 312


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1   ESLIHHFKLY 10
           E++IHHFKLY
Sbjct: 304 EAMIHHFKLY 313


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1   ESLIHHFKLY 10
           E++IHHFKLY
Sbjct: 304 EAMIHHFKLY 313


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 305 EALIHHFKLF 314


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 330 EALIHHFKLF 339


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 330 EALIHHFKLF 339


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 330 EALIHHFKLF 339


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 330 EALIHHFKLF 339


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 330 EALIHHFKLF 339


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 348 EALIHHFKLF 357


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 308 EALIHHFKLF 317


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 348 EALIHHFKLF 357


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 330 EALIHHFKLF 339


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 330 EALIHHFKLF 339


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 331 EDLIHHFKLF 340


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 331 EDLIHHFKLF 340


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 330 EALIHHFKLF 339


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 331 EDLIHHFKLF 340


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_THEFY|NADH-QUINONE oxidoreductase subunit D|Thermobifida fusca (strain YX)

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 347 EALIHHFKL 355


>sp|NUOD_PARS2|NADH-QUINONE oxidoreductase subunit D|Parafrankia sp. (strain EAN1pec)

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 370 EALIHHFKL 378


>sp|NUOD_NOCSJ|NADH-QUINONE oxidoreductase subunit D|Nocardioides sp. (strain ATCC BAA-499

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 359 EALIHHFKL 367


>sp|NUOD_MYCUA|NADH-QUINONE oxidoreductase subunit D|Mycobacterium ulcerans (strain Agy99)

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 345 EALIHHFKL 353


>sp|NUOD_MYCTU|NADH-QUINONE oxidoreductase subunit D|Mycobacterium tuberculosis (strain ATCC

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 353 EALIHHFKL 361


>sp|NUOD_MYCTO|NADH-QUINONE oxidoreductase subunit D|Mycobacterium tuberculosis (strain CDC

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 353 EALIHHFKL 361


>sp|NUOD_MYCTA|NADH-QUINONE oxidoreductase subunit D|Mycobacterium tuberculosis (strain ATCC

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 353 EALIHHFKL 361


>sp|NUOD_MYCPA|NADH-QUINONE oxidoreductase subunit D|Mycolicibacterium paratuberculosis (strain

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 354 EALIHHFKL 362


>sp|NUOD_MYCMM|NADH-QUINONE oxidoreductase subunit D|Mycobacterium marinum (strain ATCC BAA-535

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 345 EALIHHFKL 353


>sp|NUOD_MYCBP|NADH-QUINONE oxidoreductase subunit D|Mycobacterium bovis (strain BCG /

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 353 EALIHHFKL 361


>sp|NUOD_MYCBO|NADH-QUINONE oxidoreductase subunit D|Mycobacterium bovis (strain ATCC BAA-935

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 353 EALIHHFKL 361


>sp|NUOD_MYCA1|NADH-QUINONE oxidoreductase subunit D|Mycobacterium avium (strain 104)

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 354 EALIHHFKL 362


>sp|NUOD_FRACC|NADH-QUINONE oxidoreductase subunit D|Frankia casuarinae (strain DSM 45818

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 395 EALIHHFKL 403


>sp|NUOD_FRAAA|NADH-QUINONE oxidoreductase subunit D|Frankia alni (strain DSM 45986

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 383 EALIHHFKL 391


>sp|NUOD_ACIC1|NADH-QUINONE oxidoreductase subunit D|Acidothermus cellulolyticus (strain ATCC

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 353 EALIHHFKL 361


>sp|NUOD2_STRCO|NADH-QUINONE oxidoreductase subunit D 2|Streptomyces coelicolor (strain ATCC

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 353 EALIHHFKL 361


>sp|NUOD1_STRGG|NADH-QUINONE oxidoreductase subunit D 1|Streptomyces griseus subsp. griseus

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 353 EALIHHFKL 361


>sp|NUOD1_STRAW|NADH-QUINONE oxidoreductase subunit D 1|Streptomyces avermitilis (strain ATCC

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 356 EALIHHFKL 364


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 331 EDLIHHFKLF 340


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 331 EDLIHHFKLF 340


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 331 EDLIHHFKLF 340


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 330 EALIHHFKLF 339


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp. pneumophila

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 330 EALIHHFKLF 339


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 330 EALIHHFKLF 339


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EVLIHHFKLF 339


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain EF01-2)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 331 EELIHHFKLF 340


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 331 EELIHHFKLF 340


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 331 EELIHHFKLF 340


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain DSM

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain LB400)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain K96243)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain DSM

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain CJ2)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. mediasiatica

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP 134

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 331 EDLIHHFKLF 340


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 331 EELIHHFKLF 340


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM 17343

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EDLIHHFKLF 339


>sp|NUOD_NOCFA|NADH-QUINONE oxidoreductase subunit D|Nocardia farcinica (strain IFM 10152)

Query: 1   ESLIHHFKL 9
           E LIHHFKL
Sbjct: 366 EGLIHHFKL 374


>sp|NUOD_MYCVP|NADH-QUINONE oxidoreductase subunit D|Mycolicibacterium vanbaalenii (strain DSM

Query: 1   ESLIHHFKL 9
           E LIHHFKL
Sbjct: 355 EGLIHHFKL 363


>sp|NUOD_MYCSS|NADH-QUINONE oxidoreductase subunit D|Mycobacterium sp. (strain MCS)

Query: 1   ESLIHHFKL 9
           E LIHHFKL
Sbjct: 359 EGLIHHFKL 367


>sp|NUOD_MYCSK|NADH-QUINONE oxidoreductase subunit D|Mycobacterium sp. (strain KMS)

Query: 1   ESLIHHFKL 9
           E LIHHFKL
Sbjct: 359 EGLIHHFKL 367


>sp|NUOD_MYCSJ|NADH-QUINONE oxidoreductase subunit D|Mycobacterium sp. (strain JLS)

Query: 1   ESLIHHFKL 9
           E LIHHFKL
Sbjct: 359 EGLIHHFKL 367


>sp|NUOD_MYCS2|NADH-QUINONE oxidoreductase subunit D|Mycolicibacterium smegmatis (strain ATCC

Query: 1   ESLIHHFKL 9
           E LIHHFKL
Sbjct: 355 EGLIHHFKL 363


>sp|NUOD_MYCGI|NADH-QUINONE oxidoreductase subunit D|Mycolicibacterium gilvum (strain PYR-GCK)

Query: 1   ESLIHHFKL 9
           E LIHHFKL
Sbjct: 364 EGLIHHFKL 372


>sp|NUOD_MYCA9|NADH-QUINONE oxidoreductase subunit D|Mycobacteroides abscessus (strain ATCC

Query: 1   ESLIHHFKL 9
           E LIHHFKL
Sbjct: 345 EGLIHHFKL 353


>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC

Query: 1   ESLIHHFKL 9
           ES+IHHFKL
Sbjct: 310 ESMIHHFKL 318


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   ESLIHHFKLY 10
           E LIHHFKL+
Sbjct: 330 EELIHHFKLF 339


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   ESLIHHFKLY 10
           E+LI HFKLY
Sbjct: 315 EALIQHFKLY 324


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   ESLIHHFKLY 10
           E+LIHHFKL+
Sbjct: 304 EALIHHFKLF 313


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   ESLIHHFKLY 10
           E+LIHHF LY
Sbjct: 391 EALIHHFLLY 400


>sp|NUOD_CUTAK|NADH-QUINONE oxidoreductase subunit D|Cutibacterium acnes (strain DSM 16379

Query: 1   ESLIHHFKL 9
           E+LIHHFK+
Sbjct: 346 EALIHHFKI 354


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1   ESLIHHFKLY 10
           E +IHHFKL+
Sbjct: 330 EEMIHHFKLF 339


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   ESLIHHFKLY 10
           E+LI+HFKLY
Sbjct: 309 EALINHFKLY 318


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   ESLIHHFKLY 10
           E+LI+HFKLY
Sbjct: 309 EALINHFKLY 318


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   ESLIHHFKLY 10
           E +IHHFKL+
Sbjct: 330 EEMIHHFKLF 339


>sp|NUOD1_SYMTH|NADH-QUINONE oxidoreductase subunit D 1|Symbiobacterium thermophilum (strain DSM

Query: 1   ESLIHHFKL 9
           E+LIHHFKL
Sbjct: 317 EALIHHFKL 325




77|Sequence|381|390|HFKLYTEGYQ

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGYQ
Sbjct: 381 HFKLYTEGYQ 390


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGYQ
Sbjct: 381 HFKLYTEGYQ 390


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGYQ
Sbjct: 381 HFKLYTEGYQ 390


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGYQ
Sbjct: 381 HFKLYTEGYQ 390


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGYQ
Sbjct: 381 HFKLYTEGYQ 390


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGYQ
Sbjct: 381 HFKLYTEGYQ 390


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGYQ
Sbjct: 381 HFKLYTEGYQ 390


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG 29417

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY+
Sbjct: 314 HFKLYTEGYR 323


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY+
Sbjct: 329 HFKLYTEGYR 338


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 318 HFKLYTEGYH 327


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 314 HFKLYTEGYH 323


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 324 HFKLYTEGYH 333


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 316 HFKLYTEGYH 325


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd 1222)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG++
Sbjct: 330 HFKLYTEGFK 339


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG++
Sbjct: 330 HFKLYTEGFK 339


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC 19089

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG++
Sbjct: 316 HFKLYTEGFK 325


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1   HFKLYTEGY 9
           HFKLYTEGY
Sbjct: 309 HFKLYTEGY 317


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1   HFKLYTEGY 9
           HFKLYTEGY
Sbjct: 309 HFKLYTEGY 317


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1   HFKLYTEGY 9
           HFKLYTEGY
Sbjct: 307 HFKLYTEGY 315


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG++
Sbjct: 334 HFKLYTEGFR 343


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB18)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG++
Sbjct: 314 HFKLYTEGFR 323


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1   HFKLYTEGY 9
           HFKLYTEGY
Sbjct: 307 HFKLYTEGY 315


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG++
Sbjct: 320 HFKLYTEGFR 329


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG++
Sbjct: 314 HFKLYTEGFR 323


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1   HFKLYTEGY 9
           HFKLYTEGY
Sbjct: 309 HFKLYTEGY 317


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   HFKLYTEGYQ 10
           HFKL++EGYQ
Sbjct: 354 HFKLFSEGYQ 363


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB5)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG++
Sbjct: 334 HFKLYTEGFR 343


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG++
Sbjct: 319 HFKLYTEGFR 328


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 314 HFKLYTEGFH 323


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1   HFKLYTEGY 9
           HFKLYTEGY
Sbjct: 309 HFKLYTEGY 317


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG++
Sbjct: 331 HFKLYTEGFK 340


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1   HFKLYTEGY 9
           HFKLYTEGY
Sbjct: 309 HFKLYTEGY 317


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1   HFKLYTEGY 9
           HFKLYTEGY
Sbjct: 309 HFKLYTEGY 317


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1   HFKLYTEGY 9
           HFKLYTEGY
Sbjct: 309 HFKLYTEGY 317


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisA53)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG++
Sbjct: 314 HFKLYTEGFR 323


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain DS-1

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY 
Sbjct: 310 HFKLYTEGYH 319


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 321 HFKLYTEGFH 330


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 314 HFKLYTEGFH 323


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEGY+
Sbjct: 309 HFKLYTEGYE 318


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC BAA-705

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 314 HFKLYTEGFH 323


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   HFKLYTEGYQ 10
           HFKL+TEGY 
Sbjct: 334 HFKLFTEGYH 343


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   HFKLYTEGY 9
           HFKLYTEGY
Sbjct: 314 HFKLYTEGY 322


>sp|NUOD_BARBK|NADH-QUINONE oxidoreductase subunit D|Bartonella bacilliformis (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 314 HFKLYTEGFH 323


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 320 HFKLYTEGFH 329


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 314 HFKLYTEGFH 323


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 314 HFKLYTEGFH 323


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 314 HFKLYTEGFH 323


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 324 HFKLYTEGFH 333


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain TIE-1)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 320 HFKLYTEGFH 329


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 314 HFKLYTEGFH 323


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain HTCC2594)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 321 HFKLYTEGFH 330


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1   HFKLYTEGY 9
           HFKLY+EGY
Sbjct: 311 HFKLYSEGY 319


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   HFKLYTEGY 9
           HFKLY+EGY
Sbjct: 311 HFKLYSEGY 319


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEGY+
Sbjct: 309 HFKLFTEGYR 318


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 320 HFKLYTEGFH 329


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   HFKLYTEGY 9
           HFKLY+EGY
Sbjct: 311 HFKLYSEGY 319


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   HFKLYTEGY 9
           HFKLY+EGY
Sbjct: 311 HFKLYSEGY 319


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 320 HFKLYTEGFH 329


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 310 HFKLYTEGFH 319


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 320 HFKLYTEGFH 329


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   HFKLYTEGYQ 10
           HFKLY+EGY 
Sbjct: 308 HFKLYSEGYH 317


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 325 HFKLYTEGFH 334


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 323 HFKLYTEGFH 332


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   HFKLYTEGYQ 10
           HFKLY+EGY 
Sbjct: 308 HFKLYSEGYH 317


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   HFKLYTEGYQ 10
           HFKLY+EGY 
Sbjct: 308 HFKLYSEGYH 317


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 322 HFKLYTEGFH 331


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17023

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 322 HFKLYTEGFH 331


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17025

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 320 HFKLYTEGFH 329


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 323 HFKLYTEGFH 332


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17029

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 320 HFKLYTEGFH 329


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040) (Silicibacter

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 321 HFKLYTEGFH 330


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   HFKLYTEGYQ 10
           HFKLY+EGY 
Sbjct: 306 HFKLYSEGYH 315


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG++
Sbjct: 314 HFKLYTEGHR 323


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1   HFKLYTEGY 9
           HFKL+TEGY
Sbjct: 335 HFKLFTEGY 343


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 330 HFKLYTEGFH 339


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1   HFKLYTEGY 9
           HFKL+TEGY
Sbjct: 335 HFKLFTEGY 343


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1   HFKLYTEGYQ 10
           HFKL++EGY+
Sbjct: 316 HFKLFSEGYK 325


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1   HFKLYTEGY 9
           HFKL+TEGY
Sbjct: 335 HFKLFTEGY 343


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1   HFKLYTEGY 9
           HFKL+TEGY
Sbjct: 335 HFKLFTEGY 343


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1   HFKLYTEGY 9
           HFKL+TEGY
Sbjct: 335 HFKLFTEGY 343


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1   HFKLYTEGY 9
           HFKL+TEGY
Sbjct: 335 HFKLFTEGY 343


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1   HFKLYTEGY 9
           HFKL+TEGY
Sbjct: 335 HFKLFTEGY 343


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   HFKLYTEGYQ 10
           HFK +TEG+Q
Sbjct: 400 HFKFFTEGFQ 409


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   HFKLYTEGY 9
           HFKLY+EGY
Sbjct: 314 HFKLYSEGY 322


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   HFKLYTEGY 9
           HFKLY+EGY
Sbjct: 314 HFKLYSEGY 322


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC 49405

Query: 1   HFKLYTEG 8
           HFKLYTEG
Sbjct: 323 HFKLYTEG 330


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   HFKLYTEGY 9
           HFKL+TEGY
Sbjct: 335 HFKLFTEGY 343


>sp|NUOD2_ROSS1|NADH-QUINONE oxidoreductase subunit D 2|Roseiflexus sp. (strain RS-1)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG++
Sbjct: 335 HFKLWTEGFK 344


>sp|NUOD2_CHLAA|NADH-QUINONE oxidoreductase subunit D 2|Chloroflexus aurantiacus (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG++
Sbjct: 329 HFKLWTEGFK 338


>sp|NUOD1_ROSCS|NADH-QUINONE oxidoreductase subunit D 1|Roseiflexus castenholzii (strain DSM

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG++
Sbjct: 335 HFKLWTEGFK 344


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   HFKLYTEGY 9
           HFKL+TEGY
Sbjct: 316 HFKLFTEGY 324


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG++
Sbjct: 335 HFKLFTEGFR 344


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain JCM

Query: 1   HFKLYTEG 8
           HFKLYTEG
Sbjct: 316 HFKLYTEG 323


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1   HFKLYTEGY 9
           HFKL+TEGY
Sbjct: 335 HFKLFTEGY 343


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1   HFKLYTEGYQ 10
           HFKLYTEG+ 
Sbjct: 314 HFKLYTEGHH 323


>sp|NUOD1_HERA2|NADH-QUINONE oxidoreductase subunit D 1|Herpetosiphon aurantiacus (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG++
Sbjct: 340 HFKLWTEGFR 349


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1   HFKLYTEG 8
           HFKLYTEG
Sbjct: 316 HFKLYTEG 323


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1   HFKLYTEG 8
           HFKLYTEG
Sbjct: 316 HFKLYTEG 323


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1   HFKLYTEGYQ 10
           HFKL++EGY+
Sbjct: 313 HFKLFSEGYK 322


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1   HFKLYTEGY 9
           HFKL+TEGY
Sbjct: 335 HFKLFTEGY 343


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   HFKLYTEGY 9
           HFKL+TEGY
Sbjct: 335 HFKLFTEGY 343


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG++
Sbjct: 335 HFKLFTEGFR 344


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG++
Sbjct: 310 HFKLFTEGFK 319


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG++
Sbjct: 335 HFKLFTEGFR 344


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 353 HFKLFSEGY 361


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 353 HFKLFSEGY 361


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 353 HFKLFSEGY 361


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1   HFKLYTEGY 9
           HFKLYT GY
Sbjct: 309 HFKLYTAGY 317


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG++
Sbjct: 310 HFKLFTEGFK 319


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   HFKLYTEG 8
           HFKLYTEG
Sbjct: 320 HFKLYTEG 327


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 353 HFKLFSEGY 361


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 353 HFKLFSEGY 361


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 353 HFKLFSEGY 361


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 353 HFKLFSEGY 361


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 353 HFKLFSEGY 361


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 353 HFKLFSEGY 361


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 353 HFKLFSEGY 361


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 353 HFKLFSEGY 361


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 353 HFKLFSEGY 361


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain EF01-2)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 335 HFKLFSEGY 343


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain CJ2)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   HFKLYTEGY 9
           HF+LYTEG+
Sbjct: 312 HFELYTEGF 320


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain LB400)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain K96243)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 336 HFKLFTEGFH 345


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 336 HFKLFTEGFH 345


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain DSM

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 353 HFKLFSEGY 361


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 335 HFKLFSEGY 343


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 335 HFKLFSEGY 343


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   HFKLYTEG 8
           HFKLYTEG
Sbjct: 316 HFKLYTEG 323


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 353 HFKLFSEGY 361


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 335 HFKLFSEGY 343


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 335 HFKLFSEGY 343


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. mediasiatica

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 335 HFKLFSEGY 343


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 335 HFKLFSEGY 343


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 335 HFKLFSEGY 343


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   HFKLYTEGY 9
           HFKL++EGY
Sbjct: 335 HFKLFSEGY 343


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1   HFKLYTEGY 9
           HFKL+TEG+
Sbjct: 335 HFKLFTEGF 343


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1   HFKLYTEGY 9
           HFKL+TEG+
Sbjct: 335 HFKLFTEGF 343


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1   HFKLYTEGY 9
           HFKL+TEG+
Sbjct: 335 HFKLFTEGF 343


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp. pneumophila

Query: 1   HFKLYTEGY 9
           HFKL+TEG+
Sbjct: 335 HFKLFTEGF 343


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   HFKLYTEGYQ 10
           HFKL+TEG+ 
Sbjct: 335 HFKLFTEGFH 344


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   HFKLYTEGY 9
           HFKLY+EG+
Sbjct: 319 HFKLYSEGF 327




78|Sequence|386|395|TEGYQVPPGA

>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   TEGYQVPPGA 10
           TEG+QVPPGA
Sbjct: 405 TEGFQVPPGA 414


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   TEGYQVPPGA 10
           TEGYQVPPGA
Sbjct: 386 TEGYQVPPGA 395


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   TEGYQVPPGA 10
           TEGYQVPPGA
Sbjct: 386 TEGYQVPPGA 395


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   TEGYQVPPGA 10
           TEGYQVPPGA
Sbjct: 386 TEGYQVPPGA 395


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   TEGYQVPPGA 10
           TEGYQVPPGA
Sbjct: 386 TEGYQVPPGA 395


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   TEGYQVPPGA 10
           TEGYQVPPGA
Sbjct: 386 TEGYQVPPGA 395


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   TEGYQVPPGA 10
           TEGYQVPPGA
Sbjct: 386 TEGYQVPPGA 395


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   TEGYQVPPGA 10
           TEGYQVPPGA
Sbjct: 386 TEGYQVPPGA 395


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus auratus

Query: 1   TEGYQVPPGA 10
           TEGYQVPPGA
Sbjct: 97  TEGYQVPPGA 106


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   TEGYQVPPGA 10
           TEGY VPPGA
Sbjct: 339 TEGYHVPPGA 348


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1   TEGYQVPPG 9
           TEG+ VPPG
Sbjct: 341 TEGFHVPPG 349


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   TEGYQVPPG 9
           TEG+ VPPG
Sbjct: 340 TEGFHVPPG 348


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1   TEGYQVPPG 9
           TEG+ VPPG
Sbjct: 341 TEGFHVPPG 349




79|Sequence|391|400|VPPGATYTAI

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   VPPGATYTAI 10
           VPPGATYTAI
Sbjct: 391 VPPGATYTAI 400


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   VPPGATYTAI 10
           VPPGATYTAI
Sbjct: 391 VPPGATYTAI 400


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   VPPGATYTAI 10
           VPPGATYTAI
Sbjct: 391 VPPGATYTAI 400


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   VPPGATYTAI 10
           VPPGATYTAI
Sbjct: 391 VPPGATYTAI 400


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   VPPGATYTAI 10
           VPPGATYTAI
Sbjct: 391 VPPGATYTAI 400


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   VPPGATYTAI 10
           VPPGATYTAI
Sbjct: 391 VPPGATYTAI 400


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   VPPGATYTAI 10
           VPPGATYTAI
Sbjct: 391 VPPGATYTAI 400


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus auratus

Query: 1   VPPGATYTAI 10
           VPPGATYTAI
Sbjct: 102 VPPGATYTAI 111


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   VPPGATYTAI 10
           VPPGATYTA+
Sbjct: 344 VPPGATYTAV 353


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   VPPGATYTAI 10
           VPPGATY  I
Sbjct: 410 VPPGATYVPI 419


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   VPPGATYTAI 10
           VPPG TY+AI
Sbjct: 406 VPPGDTYSAI 415




80|Sequence|396|405|TYTAIEAPKG

>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   TYTAIEAPKG 10
           TYTA+EAPKG
Sbjct: 327 TYTAVEAPKG 336


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   TYTAIEAPKG 10
           TYTA+EAPKG
Sbjct: 333 TYTAVEAPKG 342


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   TYTAIEAPKG 10
           TYTAIEAPKG
Sbjct: 396 TYTAIEAPKG 405


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   TYTAIEAPKG 10
           TYTAIEAPKG
Sbjct: 396 TYTAIEAPKG 405


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   TYTAIEAPKG 10
           TYTAIEAPKG
Sbjct: 396 TYTAIEAPKG 405


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   TYTAIEAPKG 10
           TYTA+EAPKG
Sbjct: 329 TYTAVEAPKG 338


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   TYTAIEAPKG 10
           TYTAIEAPKG
Sbjct: 396 TYTAIEAPKG 405


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   TYTAIEAPKG 10
           TYTAIEAPKG
Sbjct: 396 TYTAIEAPKG 405


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   TYTAIEAPKG 10
           TYTAIEAPKG
Sbjct: 396 TYTAIEAPKG 405


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   TYTAIEAPKG 10
           TYTAIEAPKG
Sbjct: 396 TYTAIEAPKG 405


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1   TYTAIEAPKG 10
           TYTA+EAPKG
Sbjct: 339 TYTAVEAPKG 348


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   TYTAIEAPKG 10
           TYTA+EAPKG
Sbjct: 327 TYTAVEAPKG 336


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   TYTAIEAPKG 10
           TYT++EAPKG
Sbjct: 331 TYTSVEAPKG 340


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   TYTAIEAPKG 10
           TYTA EAPKG
Sbjct: 331 TYTATEAPKG 340


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus auratus

Query: 1   TYTAIEAPKG 10
           TYTAIEAPKG
Sbjct: 107 TYTAIEAPKG 116


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   TYTAIEAPKG 10
           TY+AIEAPKG
Sbjct: 411 TYSAIEAPKG 420


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1   TYTAIEAPKG 10
           TY+A+EAPKG
Sbjct: 368 TYSAVEAPKG 377


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 2   YTAIEAPKG 10
           YTA+EAPKG
Sbjct: 330 YTAVEAPKG 338


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 331 TYAAVEAPKG 340


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 335 TYVAVEAPKG 344


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1   TYTAIEAPKG 10
           TY+A+EAPKG
Sbjct: 368 TYSAVEAPKG 377


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1   TYTAIEAPKG 10
           TY+A+EAPKG
Sbjct: 368 TYSAVEAPKG 377


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1   TYTAIEAPKG 10
           TY+A+EAPKG
Sbjct: 368 TYSAVEAPKG 377


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1   TYTAIEAPKG 10
           TY+A+EAPKG
Sbjct: 368 TYSAVEAPKG 377


>sp|NUBCD_GEOUR|NADH-QUINONE oxidoreductase subunit B/C/D|Geotalea uraniireducens (strain Rf4)

Query: 2   YTAIEAPKG 10
           YTAIEAPKG
Sbjct: 727 YTAIEAPKG 735


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1   TYTAIEAPKG 10
           TYTA+E+PKG
Sbjct: 333 TYTAVESPKG 342


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   TYTAIEAPKG 10
           TY+A+EAPKG
Sbjct: 368 TYSAVEAPKG 377


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   TYTAIEAPKG 10
           TY+A+EAPKG
Sbjct: 368 TYSAVEAPKG 377


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   TYTAIEAPKG 10
           TY+A+EAPKG
Sbjct: 368 TYSAVEAPKG 377


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 2   YTAIEAPKG 10
           YTA+EAPKG
Sbjct: 325 YTAVEAPKG 333


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   TYTAIEAPKG 10
           TYTA+E+PKG
Sbjct: 331 TYTAVESPKG 340


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1   TYTAIEAPKG 10
           TY+A+EAPKG
Sbjct: 368 TYSAVEAPKG 377


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 1   TYTAIEAPKG 10
           TY+A+EAPKG
Sbjct: 368 TYSAVEAPKG 377


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 322 TYKAVEAPKG 331


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 326 TYMAVEAPKG 335


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 326 TYMAVEAPKG 335


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 368 TYAAVEAPKG 377


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 322 TYKAVEAPKG 331


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   TYTAIEAPKG 10
           TYTA+E+PKG
Sbjct: 349 TYTAVESPKG 358


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 326 TYMAVEAPKG 335


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 324 TYKAVEAPKG 333


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 326 TYMAVEAPKG 335


>sp|NUOD2_RHIEC|NADH-QUINONE oxidoreductase subunit D 2|Rhizobium etli (strain ATCC 51251

Query: 2   YTAIEAPKG 10
           Y+AIEAPKG
Sbjct: 338 YSAIEAPKG 346


>sp|NUOD2_RHIE6|NADH-QUINONE oxidoreductase subunit D 2|Rhizobium etli (strain CIAT 652)

Query: 2   YTAIEAPKG 10
           Y+AIEAPKG
Sbjct: 338 YSAIEAPKG 346


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 369 TYAAVEAPKG 378


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 324 TYKAVEAPKG 333


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 324 TYKAVEAPKG 333


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 324 TYKAVEAPKG 333


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 324 TYKAVEAPKG 333


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 324 TYKAVEAPKG 333


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 324 TYKAVEAPKG 333


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   TYTAIEAPKG 10
           TYTA+E PKG
Sbjct: 351 TYTAVEHPKG 360


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   TYTAIEAPKG 10
           TYTA+E PKG
Sbjct: 351 TYTAVEHPKG 360


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   TYTAIEAPKG 10
           TYTA+E PKG
Sbjct: 351 TYTAVEHPKG 360


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   TYTAIEAPKG 10
           TYTA+E PKG
Sbjct: 351 TYTAVEHPKG 360


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   TYTAIEAPKG 10
           TYTA+E PKG
Sbjct: 351 TYTAVEHPKG 360


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   TYTAIEAPKG 10
           TYTA+E PKG
Sbjct: 351 TYTAVEHPKG 360


>sp|NUBCD_GEOSL|NADH-QUINONE oxidoreductase subunit B/C/D|Geobacter sulfurreducens (strain ATCC

Query: 2   YTAIEAPKG 10
           Y+AIEAPKG
Sbjct: 726 YSAIEAPKG 734


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 368 TYCAVEAPKG 377


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 368 TYCAVEAPKG 377


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   TYTAIEAPKG 10
           TY A+EAPKG
Sbjct: 368 TYCAVEAPKG 377


>sp|NUBCD_GEOMG|NADH-QUINONE oxidoreductase subunit B/C/D|Geobacter metallireducens (strain ATCC

Query: 2   YTAIEAPKG 10
           Y+AIEAPKG
Sbjct: 725 YSAIEAPKG 733


>sp|NUOD2_THEYD|NADH-QUINONE oxidoreductase subunit D 2|Thermodesulfovibrio yellowstonii (strain

Query: 2   YTAIEAPKG 10
           Y+AIEAPKG
Sbjct: 335 YSAIEAPKG 343


>sp|NUOD1_STRAW|NADH-QUINONE oxidoreductase subunit D 1|Streptomyces avermitilis (strain ATCC

Query: 1   TYTAIEAPKG 10
           TY+A+E+PKG
Sbjct: 376 TYSAVESPKG 385




81|Sequence|401|410|EAPKGEFGVY

>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 336 EAPKGEFGVY 345


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 338 EAPKGEFGVY 347


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 339 EAPKGEFGVY 348


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd 1222)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 350 EAPKGEFGVY 359


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 330 EAPKGEFGVY 339


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG 29417

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 331 EAPKGEFGVY 340


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 420 EAPKGEFGVY 429


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 327 EAPKGEFGVY 336


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 331 EAPKGEFGVY 340


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 331 EAPKGEFGVY 340


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 336 EAPKGEFGVY 345


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 339 EAPKGEFGVY 348


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 329 EAPKGEFGVY 338


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 331 EAPKGEFGVY 340


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17025

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 340 EAPKGEFGVY 349


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 336 EAPKGEFGVY 345


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 344 EAPKGEFGVY 353


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 327 EAPKGEFGVY 336


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 329 EAPKGEFGVY 338


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1   EAPKGEFGVY 10
           EAPKGEFG+Y
Sbjct: 344 EAPKGEFGIY 353


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1   EAPKGEFGVY 10
           EAPKGEFG+Y
Sbjct: 344 EAPKGEFGIY 353


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain TIE-1)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 340 EAPKGEFGVY 349


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 340 EAPKGEFGVY 349


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17023

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 342 EAPKGEFGVY 351


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 329 EAPKGEFGVY 338


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 329 EAPKGEFGVY 338


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17029

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 340 EAPKGEFGVY 349


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 336 EAPKGEFGVY 345


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 336 EAPKGEFGVY 345


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 329 EAPKGEFGVY 338


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 328 EAPKGEFGVY 337


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040) (Silicibacter

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 341 EAPKGEFGVY 350


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC 49405

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 343 EAPKGEFGVY 352


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB5)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 354 EAPKGEFGVY 363


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_BARBK|NADH-QUINONE oxidoreductase subunit D|Bartonella bacilliformis (strain ATCC

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 329 EAPKGEFGVY 338


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 329 EAPKGEFGVY 338


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 329 EAPKGEFGVY 338


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 340 EAPKGEFGVY 349


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC BAA-705

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1   EAPKGEFGVY 10
           EAPKGEFG+Y
Sbjct: 355 EAPKGEFGIY 364


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1   EAPKGEFGVY 10
           EAPKGEFG+Y
Sbjct: 355 EAPKGEFGIY 364


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 401 EAPKGEFGVY 410


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 333 EAPKGEFGVY 342


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 343 EAPKGEFGVY 352


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 345 EAPKGEFGVY 354


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 329 EAPKGEFGVY 338


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 329 EAPKGEFGVY 338


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 351 EAPKGEFGVY 360


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 349 EAPKGEFGVY 358


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 401 EAPKGEFGVY 410


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 401 EAPKGEFGVY 410


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 401 EAPKGEFGVY 410


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1   EAPKGEFGVY 10
           EAPKGEFG+Y
Sbjct: 355 EAPKGEFGIY 364


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp. pneumophila

Query: 1   EAPKGEFGVY 10
           EAPKGEFG+Y
Sbjct: 355 EAPKGEFGIY 364


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 328 EAPKGEFGVY 337


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 401 EAPKGEFGVY 410


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 401 EAPKGEFGVY 410


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   EAPKGEFGVY 10
           EAPKGEFGV+
Sbjct: 332 EAPKGEFGVF 341


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 328 EAPKGEFGVY 337


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 355 EAPKGEFGVY 364


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 401 EAPKGEFGVY 410


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   EAPKGEFGVY 10
           E+PKGEFGVY
Sbjct: 341 ESPKGEFGVY 350


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1   EAPKGEFGVY 10
           EAPKGEFG+Y
Sbjct: 355 EAPKGEFGIY 364


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 355 EAPKGEFGVY 364


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   EAPKGEFGVY 10
           EAPKGEFGV+
Sbjct: 332 EAPKGEFGVF 341


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1   EAPKGEFGVY 10
           E+PKGEFGVY
Sbjct: 344 ESPKGEFGVY 353


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain HTCC2594)

Query: 1   EAPKGEFGVY 10
           E+PKGEFGVY
Sbjct: 341 ESPKGEFGVY 350


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 340 EAPKGEFGVY 349


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 340 EAPKGEFGVY 349


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 340 EAPKGEFGVY 349


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain JCM

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 336 EAPKGEFGVY 345


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain DS-1

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 330 EAPKGEFGVY 339


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1   EAPKGEFGVY 10
           EAPKGEFGVY
Sbjct: 334 EAPKGEFGVY 343


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   EAPKGEFGVY 10
           E+PKGEFGVY
Sbjct: 343 ESPKGEFGVY 352


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 350 EGPKGEFGVY 359


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1   EAPKGEFGVY 10
           EAPKGEFGV+
Sbjct: 342 EAPKGEFGVF 351


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1   EAPKGEFGVY 10
           E+PKGEFGVY
Sbjct: 338 ESPKGEFGVY 347


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGV+
Sbjct: 354 EAPKGEFGVF 363


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1   EAPKGEFGVY 10
           EAPKGEFGV+
Sbjct: 334 EAPKGEFGVF 343


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   EAPKGEFGVY 10
           E+PKGEFGVY
Sbjct: 354 ESPKGEFGVY 363


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGV+
Sbjct: 350 EAPKGEFGVF 359


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1   EAPKGEFGVY 10
           EAPKGEFGV+
Sbjct: 340 EAPKGEFGVF 349


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB18)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGV+
Sbjct: 334 EAPKGEFGVF 343


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 373 EAPKGEFGCY 382


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 373 EAPKGEFGCY 382


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   EAPKGEFGVY 10
           E+PKGEFGVY
Sbjct: 336 ESPKGEFGVY 345


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain DSM

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 373 EAPKGEFGCY 382


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 373 EAPKGEFGCY 382


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EHPKGEFGVY 364


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EHPKGEFGVY 364


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EQPKGEFGVY 364


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EQPKGEFGVY 364


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EHPKGEFGVY 364


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 374 EAPKGEFGCY 383


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EHPKGEFGVY 364


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   EAPKGEFGVY 10
           E+PKGEFGVY
Sbjct: 326 ESPKGEFGVY 335


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EQPKGEFGVY 364


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EQPKGEFGVY 364


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EQPKGEFGVY 364


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EHPKGEFGVY 364


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 373 EAPKGEFGCY 382


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EHPKGEFGVY 364


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EHPKGEFGVY 364


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EHPKGEFGVY 364


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EHPKGEFGVY 364


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EHPKGEFGVY 364


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EHPKGEFGVY 364


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. mediasiatica

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EHPKGEFGVY 364


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 373 EAPKGEFGCY 382


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 373 EAPKGEFGCY 382


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 373 EAPKGEFGCY 382


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 373 EAPKGEFGCY 382


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EHPKGEFGVY 364


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 355 EHPKGEFGVY 364


>sp|NDHH_ANTAG|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Anthoceros angustus

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NDHH1_GLOVI|NAD(P)H-QUINONE oxidoreductase subunit H 1|Gloeobacter violaceus (strain ATCC 29082

Query: 1   EAPKGEFGVY 10
           EAPKGE GVY
Sbjct: 331 EAPKGELGVY 340


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 356 EHPKGEFGVY 365


>sp|NDHH_CHAGL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Chaetosphaeridium globosum

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 329 EAPKGELGIY 338


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   EAPKGEFGVY 10
           EAPKGE GVY
Sbjct: 416 EAPKGEMGVY 425


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain EF01-2)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 356 EHPKGEFGVY 365


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 356 EHPKGEFGVY 365


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 356 EHPKGEFGVY 365


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 356 EHPKGEFGVY 365


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   EAPKGEFGVY 10
           E PKGEFGVY
Sbjct: 356 EHPKGEFGVY 365


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 355 EAPKGEFGCY 364


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain CJ2)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisA53)

Query: 1   EAPKGEFGVY 10
           EAPKGEFGV+
Sbjct: 334 EAPKGEFGVF 343


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC 19089

Query: 1   EAPKGEFGVY 10
           EAPKGEFGV+
Sbjct: 336 EAPKGEFGVF 345


>sp|NDHH_STAPU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Staurastrum punctulatum

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 333 EAPKGELGIY 342


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NDHH_LOLPR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Lolium perenne (Perennial

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NDHH_FESAR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Festuca arundinacea (Tall

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NDHH_ORYSJ|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza sativa subsp.

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NDHH_ORYSI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza sativa subsp. indica

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NDHH_ORYSA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza sativa (Rice)

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NDHH_ORYNI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Oryza nivara (Indian wild

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NDHH_AGRST|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Agrostis stolonifera

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 373 EAPKGEFGCY 382


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 373 EAPKGEFGCY 382


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 373 EAPKGEFGCY 382


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 373 EAPKGEFGCY 382


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain LB400)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 1   EAPKGEFGVY 10
           EAPKGEFG Y
Sbjct: 373 EAPKGEFGCY 382


>sp|NDUS2_PARTE|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Paramecium tetraurelia

Query: 1   EAPKGEFGV 9
           E+PKGEFGV
Sbjct: 338 ESPKGEFGV 346


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain DSM

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM 17343

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP 134

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 356 EHPKGEFGIY 365


>sp|NDHH_DIOEL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Dioscorea elephantipes

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 333 EAPKGELGIY 342


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 356 EHPKGEFGIY 365


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 356 EHPKGEFGIY 365


>sp|NDHH_BRADI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Brachypodium distachyon

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NDHH_SORBI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Sorghum bicolor (Sorghum)

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NDHH_HORVU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Hordeum vulgare (Barley)

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 356 EHPKGEFGIY 365


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 356 EHPKGEFGIY 365


>sp|NDHH_SACOF|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Saccharum officinarum

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NDHH_SACHY|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Saccharum hybrid

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain K96243)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NDHH_WHEAT|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Triticum aestivum (Wheat)

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NDHH_MAIZE|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Zea mays (Maize)

Query: 1   EAPKGEFGVY 10
           EAPKGE G+Y
Sbjct: 331 EAPKGELGIY 340


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1   EAPKGEFGVY 10
           EAPKGEF VY
Sbjct: 330 EAPKGEFAVY 339


>sp|NDHH_CHLAT|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Chlorokybus atmophyticus

Query: 1   EAPKGEFGVY 10
           EAPKGE GV+
Sbjct: 331 EAPKGELGVF 340


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1   EAPKGEFGVY 10
           E PKGEFG+Y
Sbjct: 355 EHPKGEFGIY 364


>sp|NDHH_MESVI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Mesostigma viride (Green

Query: 1   EAPKGEFGVY 10
           EAPKGE GV+
Sbjct: 329 EAPKGELGVF 338


>sp|NDHH_ZYGCR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Zygnema circumcarinatum

Query: 1   EAPKGEFGVY 10
           EAPKGE GV+
Sbjct: 331 EAPKGELGVF 340


>sp|NDHH_NEPOL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nephroselmis olivacea

Query: 1   EAPKGEFGVY 10
           EAPKGE GV+
Sbjct: 329 EAPKGELGVF 338


>sp|NDHH_PHYPA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Physcomitrium patens

Query: 1   EAPKGEFGVY 10
           EAPKGE GV+
Sbjct: 329 EAPKGELGVF 338


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   EAPKGEFGVY 10
           EAPKGE GV+
Sbjct: 336 EAPKGEMGVF 345


>sp|NDHH_PSINU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Psilotum nudum (Whisk fern)

Query: 1   EAPKGEFGVY 10
           EAPKGE G++
Sbjct: 331 EAPKGELGIF 340


>sp|NDHH_CERDE|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Ceratophyllum demersum

Query: 1   EAPKGEFGVY 10
           EAPKGE GV+
Sbjct: 331 EAPKGELGVF 340


>sp|NUOD_CAMC1|NADH-QUINONE oxidoreductase subunit D|Campylobacter concisus (strain 13826)

Query: 1   EAPKGEFGVY 10
           E+PKGE G+Y
Sbjct: 347 ESPKGELGIY 356


>sp|NUOD2_RHIEC|NADH-QUINONE oxidoreductase subunit D 2|Rhizobium etli (strain ATCC 51251

Query: 1   EAPKGEFGVY 10
           EAPKGE G Y
Sbjct: 342 EAPKGELGFY 351


>sp|NDHH_NANDO|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Nandina domestica (Heavenly

Query: 1   EAPKGEFGVY 10
           EAPKGE G++
Sbjct: 331 EAPKGELGIF 340


>sp|NDHH_JASNU|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Jasminum nudiflorum (Winter

Query: 1   EAPKGEFGVY 10
           EAPKGE G++
Sbjct: 331 EAPKGELGIF 340


>sp|NDHH_ADICA|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Adiantum capillus-veneris

Query: 1   EAPKGEFGVY 10
           EAPKGE G++
Sbjct: 332 EAPKGELGIF 341


>sp|NUOD2_RHIE6|NADH-QUINONE oxidoreductase subunit D 2|Rhizobium etli (strain CIAT 652)

Query: 1   EAPKGEFGVY 10
           EAPKGE G Y
Sbjct: 342 EAPKGELGFY 351


>sp|NUOD2_RHIME|NADH-QUINONE oxidoreductase subunit D 2|Rhizobium meliloti (strain 1021)

Query: 1   EAPKGEFGVY 10
           EAPKGE G Y
Sbjct: 342 EAPKGELGFY 351


>sp|NDHH_MARPO|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Marchantia polymorpha

Query: 1   EAPKGEFGVY 10
           EAPKGE G++
Sbjct: 330 EAPKGELGIF 339


>sp|NUOD2_SINMW|NADH-QUINONE oxidoreductase subunit D 2|Sinorhizobium medicae (strain WSM419)

Query: 1   EAPKGEFGVY 10
           EAPKGE G Y
Sbjct: 342 EAPKGELGFY 351


>sp|NDHH_BUXMI|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Buxus microphylla

Query: 1   EAPKGEFGVY 10
           EAPKGE G++
Sbjct: 331 EAPKGELGIF 340


>sp|NDHH_ANGEV|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Angiopteris evecta (Mule's

Query: 1   EAPKGEFGVY 10
           EAPKGE G++
Sbjct: 331 EAPKGELGIF 340


>sp|NUOD1_CHLT3|NADH-QUINONE oxidoreductase subunit D 1|Chloroherpeton thalassium (strain ATCC

Query: 1   EAPKGEFGVY 10
           EAPKGE G Y
Sbjct: 378 EAPKGELGFY 387




82|Sequence|406|415|EFGVYLVSDG

>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB5)

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 359 EFGVYLVSDG 368


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 346 EFGVYLVSDG 355


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 343 EFGVYLVSDG 352


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 406 EFGVYLVSDG 415


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 406 EFGVYLVSDG 415


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 406 EFGVYLVSDG 415


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 406 EFGVYLVSDG 415


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 406 EFGVYLVSDG 415


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 406 EFGVYLVSDG 415


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 406 EFGVYLVSDG 415


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 349 EFGVYLVSDG 358


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC BAA-705

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 345 EFGVYLVSDG 354


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 335 EFGVYLVSDG 344


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 344 EFGVYLVSDG 353


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 345 EFGVYLVSDG 354


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain TIE-1)

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 345 EFGVYLVSDG 354


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 341 EFGVYLVSDG 350


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_BARBK|NADH-QUINONE oxidoreductase subunit D|Bartonella bacilliformis (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 348 EFGVYLVSDG 357


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG 29417

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 341 EFGVYLVSDG 350


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain EF01-2)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1   EFGVYLVSDG 10
           EFGVYL+SDG
Sbjct: 339 EFGVYLISDG 348


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 345 EFGVYLVSDG 354


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 345 EFGVYLVSDG 354


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1   EFGVYLVSDG 10
           EFGVYL+SDG
Sbjct: 360 EFGVYLISDG 369


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 339 EFGVYLVSDG 348


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   EFGVYLVSDG 10
           EFGVYL+SDG
Sbjct: 334 EFGVYLISDG 343


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1   EFGVYLVSDG 10
           EFGVYL+SDG
Sbjct: 360 EFGVYLISDG 369


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain DS-1

Query: 1   EFGVYLVSDG 10
           EFGVYLVSDG
Sbjct: 335 EFGVYLVSDG 344


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 1   EFGVYLVSDG 10
           EFGVYL+SDG
Sbjct: 339 EFGVYLISDG 348


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1   EFGVYLVSDG 10
           EFGVYL+SDG
Sbjct: 360 EFGVYLISDG 369


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1   EFGVYLVSDG 10
           EFGVYL+SDG
Sbjct: 360 EFGVYLISDG 369


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 361 EFGIYLVSDG 370


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 361 EFGIYLVSDG 370


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain K96243)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 333 EFGVYIVSDG 342


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 333 EFGVYIVSDG 342


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1   EFGVYLVSDG 10
           EFGVYL+SDG
Sbjct: 360 EFGVYLISDG 369


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 336 EFGVYIVSDG 345


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 336 EFGVYIVSDG 345


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 336 EFGVYIVSDG 345


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 341 EFGVYIVSDG 350


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1   EFGVYLVSDG 10
           EFG+YLVSDG
Sbjct: 360 EFGIYLVSDG 369


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 333 EFGVYIVSDG 342


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 1   EFGVYLVSDG 10
           EFG+YL+SDG
Sbjct: 360 EFGIYLISDG 369


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 360 EFGVYIVSDG 369


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 360 EFGVYIVSDG 369


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 360 EFGVYIVSDG 369


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 360 EFGVYIVSDG 369


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 360 EFGVYIVSDG 369


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain DSM

Query: 1   EFGVYLVSDG 10
           EFG+YL+SDG
Sbjct: 360 EFGIYLISDG 369


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 359 EFGVYLVADG 368


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain JCM

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 341 EFGVYLVADG 350


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 349 EFGVYLVADG 358


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 425 EFGVYLVADG 434


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 336 EFGVYIVSDG 345


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain HTCC2594)

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 346 EFGVYLVADG 355


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFG+YL+SDG
Sbjct: 360 EFGIYLISDG 369


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd 1222)

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 355 EFGVYLVADG 364


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 355 EFGVYLVADG 364


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 339 EFGVYLVADG 348


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1   EFGVYLVSDG 10
           EFG+Y+VSDG
Sbjct: 360 EFGIYMVSDG 369


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1   EFGVYLVSDG 10
           EFG+Y+VSDG
Sbjct: 360 EFGIYMVSDG 369


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC 49405

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 348 EFGVYLVADG 357


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1   EFGVYLVSDG 10
           EFG+Y+VSDG
Sbjct: 360 EFGIYMVSDG 369


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp. pneumophila

Query: 1   EFGVYLVSDG 10
           EFG+Y+VSDG
Sbjct: 360 EFGIYMVSDG 369


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 338 EFGVYIVSDG 347


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1   EFGVYLVSDG 10
           EFG+Y+VSDG
Sbjct: 360 EFGIYMVSDG 369


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFG+Y+VSDG
Sbjct: 360 EFGIYMVSDG 369


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 356 EFGVYLVADG 365


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFG+YL+SDG
Sbjct: 360 EFGIYLISDG 369


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 341 EFGVYLVADG 350


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 344 EFGVYVVSDG 353


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain DSM

Query: 1   EFGVYLVSDG 10
           EFG+YL+SDG
Sbjct: 360 EFGIYLISDG 369


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain LB400)

Query: 1   EFGVYLVSDG 10
           EFG+YL+SDG
Sbjct: 360 EFGIYLISDG 369


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   EFGVYLVSDG 10
           EFG+Y+VSDG
Sbjct: 360 EFGIYIVSDG 369


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1   EFGVYLVSDG 10
           EFG+Y+VSDG
Sbjct: 360 EFGIYIVSDG 369


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17025

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 345 EFGVYLVADG 354


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17023

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 347 EFGVYLVADG 356


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17029

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 345 EFGVYLVADG 354


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1   EFGVYLVSDG 10
           EFG+YL+SDG
Sbjct: 360 EFGIYLISDG 369


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 350 EFGVYLVADG 359


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 339 EFGVYLVADG 348


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 348 EFGVYLVADG 357


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1   EFGVYLVSDG 10
           EFG+Y+VSDG
Sbjct: 360 EFGIYIVSDG 369


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   EFGVYLVSDG 10
           EFGVY++SDG
Sbjct: 361 EFGVYIISDG 370


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain CJ2)

Query: 1   EFGVYLVSDG 10
           EFG+Y+VSDG
Sbjct: 360 EFGIYIVSDG 369


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 335 EFGVYLVADG 344


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   EFGVYLVSDG 10
           EFGVY++SDG
Sbjct: 361 EFGVYIISDG 370


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   EFGVYLVSDG 10
           EFGVY++SDG
Sbjct: 361 EFGVYIISDG 370


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1   EFGVYLVSDG 10
           EFGV+LVSDG
Sbjct: 345 EFGVFLVSDG 354


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040) (Silicibacter

Query: 1   EFGVYLVSDG 10
           EFGVYLV+DG
Sbjct: 346 EFGVYLVADG 355


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisA53)

Query: 1   EFGVYLVSDG 10
           EFGV+LVSDG
Sbjct: 339 EFGVFLVSDG 348


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   EFGVYLVSDG 10
           EFGVY++SDG
Sbjct: 361 EFGVYIISDG 370


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   EFGVYLVSDG 10
           EFGVY++SDG
Sbjct: 361 EFGVYIISDG 370


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB18)

Query: 1   EFGVYLVSDG 10
           EFGV+LVSDG
Sbjct: 339 EFGVFLVSDG 348


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   EFGVYLVSDG 10
           EFGVY++SDG
Sbjct: 361 EFGVYIISDG 370


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1   EFGVYLVSDG 10
           EFGV+LVSDG
Sbjct: 339 EFGVFLVSDG 348


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1   EFGVYLVSDG 10
           EFGVYLVS+G
Sbjct: 354 EFGVYLVSNG 363


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   EFGVYLVSDG 10
           EFGVYLVS+G
Sbjct: 341 EFGVYLVSNG 350


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1   EFGVYLVSDG 10
           EFG+Y VSDG
Sbjct: 360 EFGIYFVSDG 369


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1   EFGVYLVSDG 10
           EFG+Y++SDG
Sbjct: 360 EFGIYMISDG 369


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1   EFGVYLVSDG 10
           EFG YLVSDG
Sbjct: 378 EFGCYLVSDG 387


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1   EFGVYLVSDG 10
           EFG+YLV+DG
Sbjct: 361 EFGIYLVADG 370


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1   EFGVYLVSDG 10
           EFG YLVSDG
Sbjct: 378 EFGCYLVSDG 387


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   EFGVYLVSDG 10
           EFGVYL SDG
Sbjct: 339 EFGVYLYSDG 348


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   EFGVYLVSDG 10
           EFGVYL SDG
Sbjct: 339 EFGVYLYSDG 348


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1   EFGVYLVSDG 10
           EFG+YLV+DG
Sbjct: 361 EFGIYLVADG 370


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFG+YLV+DG
Sbjct: 361 EFGIYLVADG 370


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   EFGVYLVSDG 10
           EFGVYLVS+G
Sbjct: 343 EFGVYLVSNG 352


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   EFGVYLVSDG 10
           EFG+Y+VSDG
Sbjct: 360 EFGIYMVSDG 369


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFGVYLV DG
Sbjct: 345 EFGVYLVGDG 354


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1   EFGVYLVSDG 10
           EFG+Y++SDG
Sbjct: 360 EFGIYIISDG 369


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   EFGVYLVSDG 10
           EFGVY VSDG
Sbjct: 360 EFGVYAVSDG 369


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1   EFGVYLVSDG 10
           EFG YL+SDG
Sbjct: 378 EFGCYLISDG 387


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1   EFGVYLVSDG 10
           EFG YL+SDG
Sbjct: 378 EFGCYLISDG 387


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1   EFGVYLVSDG 10
           EFG YL+SDG
Sbjct: 378 EFGCYLISDG 387


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1   EFGVYLVSDG 10
           EFG YL+SDG
Sbjct: 378 EFGCYLISDG 387


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   EFGVYLVSDG 10
           EFG YL+SDG
Sbjct: 379 EFGCYLISDG 388


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   EFGVYLVSDG 10
           EFGVY VSDG
Sbjct: 360 EFGVYAVSDG 369


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   EFGVYLVSDG 10
           EFGVY+VSDG
Sbjct: 331 EFGVYIVSDG 340


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC 19089

Query: 1   EFGVYLVSDG 10
           EFGV++VSDG
Sbjct: 341 EFGVFVVSDG 350


>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC

Query: 1   EFGVYLVSDG 10
           E GVYLVSDG
Sbjct: 340 ELGVYLVSDG 349


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1   EFGVYLVSDG 10
           EFGV+LV+DG
Sbjct: 355 EFGVFLVADG 364


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1   EFGVYLVSDG 10
           EF VYLVSDG
Sbjct: 335 EFAVYLVSDG 344


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1   EFGVYLVSDG 10
           EFGVY+V+DG
Sbjct: 339 EFGVYVVADG 348


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   EFGVYLVSDG 10
           EFG+Y +SDG
Sbjct: 360 EFGIYAISDG 369


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFG+Y +SDG
Sbjct: 360 EFGIYAISDG 369


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP 134

Query: 1   EFGVYLVSDG 10
           EFG+Y +SDG
Sbjct: 360 EFGIYAISDG 369


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   EFGVYLVSDG 10
           EFG YL+SDG
Sbjct: 378 EFGCYLMSDG 387


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   EFGVYLVSDG 10
           EFG YL+SDG
Sbjct: 378 EFGCYLMSDG 387


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   EFGVYLVSDG 10
           EFG YL+SDG
Sbjct: 378 EFGCYLMSDG 387


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1   EFGVYLVSDG 10
           EFG YL+SDG
Sbjct: 378 EFGCYLMSDG 387


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 1   EFGVYLVSDG 10
           EFG YL+SDG
Sbjct: 378 EFGCYLMSDG 387


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   EFGVYLVSDG 10
           EFG YL+SDG
Sbjct: 378 EFGCYLMSDG 387


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   EFGVYLVSDG 10
           EFG YL+SDG
Sbjct: 378 EFGCYLMSDG 387


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   EFGVYLVSDG 10
           EFG YL+SDG
Sbjct: 378 EFGCYLMSDG 387


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1   EFGVYLVSDG 10
           EFGV+LVS+G
Sbjct: 359 EFGVFLVSNG 368


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   EFGVYLVSDG 10
           EFGV+LVS+G
Sbjct: 337 EFGVFLVSNG 346


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   EFGVYLVSDG 10
           EFGV+LVS+G
Sbjct: 337 EFGVFLVSNG 346


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 1   EFGVYLVSDG 10
           EFG+Y +SDG
Sbjct: 360 EFGIYAISDG 369


>sp|NDUS2_PARTE|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Paramecium tetraurelia

Query: 1   EFGVYLVSDG 10
           EFGV LVSDG
Sbjct: 343 EFGVTLVSDG 352


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1   EFGVYLVSDG 10
           EFG+Y +SDG
Sbjct: 360 EFGIYAISDG 369


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM 17343

Query: 1   EFGVYLVSDG 10
           EFG+Y +SDG
Sbjct: 360 EFGIYAISDG 369


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   EFGVYLVSDG 10
           EFG Y++SDG
Sbjct: 360 EFGCYMISDG 369


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   EFGVYLVSDG 10
           EFGVY+ SDG
Sbjct: 360 EFGVYIKSDG 369


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   EFGVYLVSDG 10
           EFGVY+ SDG
Sbjct: 360 EFGVYIKSDG 369


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1   EFGVYLVSDG 10
           EFGVY+ SDG
Sbjct: 360 EFGVYIKSDG 369


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. mediasiatica

Query: 1   EFGVYLVSDG 10
           EFGVY+ SDG
Sbjct: 360 EFGVYIKSDG 369


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   EFGVYLVSDG 10
           EFGVY+ SDG
Sbjct: 360 EFGVYIKSDG 369


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   EFGVYLVSDG 10
           EFGVY+ SDG
Sbjct: 360 EFGVYIKSDG 369


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   EFGVYLVSDG 10
           EFGVY+ SDG
Sbjct: 360 EFGVYIKSDG 369


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   EFGVYLVSDG 10
           EFGVY+ SDG
Sbjct: 360 EFGVYIKSDG 369


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1   EFGVYLVSDG 10
           EFGVY+ SDG
Sbjct: 360 EFGVYIKSDG 369


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   EFGVYLVSDG 10
           E GVY+VSDG
Sbjct: 421 EMGVYVVSDG 430


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   EFGVYLVSDG 10
           EFGVYLVS G
Sbjct: 341 EFGVYLVSKG 350




83|Sequence|411|420|LVSDGSSRPY

>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   LVSDGSSRPY 10
           LVSDGSSRPY
Sbjct: 411 LVSDGSSRPY 420


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   LVSDGSSRPY 10
           LVSDGSSRPY
Sbjct: 411 LVSDGSSRPY 420


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   LVSDGSSRPY 10
           LVSDGSSRPY
Sbjct: 411 LVSDGSSRPY 420


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   LVSDGSSRPY 10
           LVSDGSSRPY
Sbjct: 411 LVSDGSSRPY 420


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   LVSDGSSRPY 10
           LVSDGSSRPY
Sbjct: 411 LVSDGSSRPY 420


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   LVSDGSSRPY 10
           LVSDGSSRPY
Sbjct: 411 LVSDGSSRPY 420


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   LVSDGSSRPY 10
           LVSDGSSRPY
Sbjct: 411 LVSDGSSRPY 420


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   LVSDGSSRPY 10
           LVSDGSS+PY
Sbjct: 344 LVSDGSSKPY 353


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1   LVSDGSSRPY 10
           LVSDGS+RPY
Sbjct: 348 LVSDGSNRPY 357


>sp|NUOD_TRIL1|NADH-QUINONE oxidoreductase subunit D|Trichlorobacter lovleyi (strain ATCC

Query: 1   LVSDGSSRPY 10
           LVSDGSS+PY
Sbjct: 338 LVSDGSSKPY 347


>sp|NDUS2_PARTE|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Paramecium tetraurelia

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 348 LVSDGSNKPY 357


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 350 LVSDGSNKPY 359


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 350 LVSDGSNKPY 359


>sp|NUOD1_ROSS1|NADH-QUINONE oxidoreductase subunit D 1|Roseiflexus sp. (strain RS-1)

Query: 1   LVSDGSSRPY 10
           LVSDGS RPY
Sbjct: 322 LVSDGSERPY 331


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 344 LVSDGSNKPY 353


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   LVSDGSSRPY 10
           LVS GSSRPY
Sbjct: 346 LVSKGSSRPY 355


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB5)

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 364 LVSDGSNKPY 373


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 344 LVSDGSNKPY 353


>sp|NUOD2_ROSCS|NADH-QUINONE oxidoreductase subunit D 2|Roseiflexus castenholzii (strain DSM

Query: 1   LVSDGSSRPY 10
           LVSDGS RPY
Sbjct: 322 LVSDGSERPY 331


>sp|NUOD_PELPD|NADH-QUINONE oxidoreductase subunit D|Pelobacter propionicus (strain DSM 2379

Query: 1   LVSDGSSRPY 10
           L+SDGS RPY
Sbjct: 351 LISDGSGRPY 360


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1   LVSDGSSRPY 10
           LV+DGS+RPY
Sbjct: 354 LVADGSNRPY 363


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB18)

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 344 LVSDGSNKPY 353


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 350 LVSDGSNKPY 359


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 344 LVSDGSNKPY 353


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 344 LVSDGSNKPY 353


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 344 LVSDGSNKPY 353


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 344 LVSDGSNKPY 353


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 344 LVSDGSNKPY 353


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 344 LVSDGSNKPY 353


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 344 LVSDGSNKPY 353


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   LVSDGSSRPY 10
           LV+DGS+RPY
Sbjct: 364 LVADGSNRPY 373


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   LVSDGSSRPY 10
           L+SDG+S+PY
Sbjct: 339 LISDGTSKPY 348


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1   LVSDGSSRPY 10
           LVSDG++RPY
Sbjct: 340 LVSDGTNRPY 349


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 346 LVSDGSNKPY 355


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 350 LVSDGSNKPY 359


>sp|NUOCD_ALIB4|NADH-QUINONE oxidoreductase subunit C/D|Aliarcobacter butzleri (strain RM4018)

Query: 1   LVSDGSSRPY 10
           +VSDGS RPY
Sbjct: 492 IVSDGSGRPY 501


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain TIE-1)

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 350 LVSDGSNKPY 359


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   LVSDGSSRPY 10
           LVS+GS+RPY
Sbjct: 342 LVSNGSNRPY 351


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 354 LVSDGSNKPY 363


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 344 LVSDGSNKPY 353


>sp|NUOD_GEOUR|NADH-QUINONE oxidoreductase subunit D|Geotalea uraniireducens (strain Rf4)

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 338 LVSDGSTKPY 347


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 344 LVSDGSNKPY 353


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 351 LVSDGSNKPY 360


>sp|NUOD2_THEYD|NADH-QUINONE oxidoreductase subunit D 2|Thermodesulfovibrio yellowstonii (strain

Query: 1   LVSDGSSRPY 10
           +VSDGS RPY
Sbjct: 349 IVSDGSGRPY 358


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   LVSDGSSRPY 10
           LVSDG++RPY
Sbjct: 346 LVSDGTNRPY 355


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 1   LVSDGSSRPY 10
           +VSDGS RPY
Sbjct: 322 MVSDGSDRPY 331


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   LVSDGSSRPY 10
           +VSDG++RPY
Sbjct: 338 IVSDGTNRPY 347


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   LVSDGSSRPY 10
           +VSDG++RPY
Sbjct: 338 IVSDGTNRPY 347


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   LVSDGSSRPY 10
           +VSDG++RPY
Sbjct: 338 IVSDGTNRPY 347


>sp|NUOCD_BDEBA|NADH-QUINONE oxidoreductase subunit C/D|Bdellovibrio bacteriovorus (strain ATCC

Query: 1   LVSDGSSRPY 10
           LVSDGS+ PY
Sbjct: 508 LVSDGSANPY 517


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   LVSDGSSRPY 10
           +VSDGS RPY
Sbjct: 426 VVSDGSERPY 435


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1   LVSDGSSRPY 10
           LVSDGS++PY
Sbjct: 344 LVSDGSNKPY 353


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   LVSDGSSRPY 10
           LVS+GS+RPY
Sbjct: 342 LVSNGSNRPY 351


>sp|NUOD_MOOTA|NADH-QUINONE oxidoreductase subunit D|Moorella thermoacetica (strain ATCC 39073

Query: 1   LVSDGSSRPY 10
           LVSDG S+PY
Sbjct: 319 LVSDGGSKPY 328


>sp|NUOD1_CHLAA|NADH-QUINONE oxidoreductase subunit D 1|Chloroflexus aurantiacus (strain ATCC

Query: 1   LVSDGSSRPY 10
           LVSDGS +PY
Sbjct: 317 LVSDGSGKPY 326




84|Sequence|416|425|SSRPYRCKIK

>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   SSRPYRCKIK 10
           SSRPYRCKIK
Sbjct: 351 SSRPYRCKIK 360


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   SSRPYRCKIK 10
           SSRPYRCKIK
Sbjct: 416 SSRPYRCKIK 425


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   SSRPYRCKIK 10
           SSRPYRCKIK
Sbjct: 416 SSRPYRCKIK 425


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   SSRPYRCKIK 10
           SSRPYRCKIK
Sbjct: 416 SSRPYRCKIK 425


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   SSRPYRCKIK 10
           SSRPYRCKIK
Sbjct: 416 SSRPYRCKIK 425


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   SSRPYRCKIK 10
           SSRPYRCKIK
Sbjct: 416 SSRPYRCKIK 425


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   SSRPYRCKIK 10
           SSRPYRCKIK
Sbjct: 416 SSRPYRCKIK 425


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   SSRPYRCKIK 10
           SSRPYRCKIK
Sbjct: 416 SSRPYRCKIK 425


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   SSRPYRCKIK 10
           SS+PYRCKIK
Sbjct: 349 SSKPYRCKIK 358


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1   SSRPYRCKIK 10
           S+RPYRCKI+
Sbjct: 359 SNRPYRCKIR 368


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1   SSRPYRCKIK 10
           S+RPYRCKI+
Sbjct: 353 SNRPYRCKIR 362


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   SSRPYRCKIK 10
           S++PYRCKIK
Sbjct: 354 SNKPYRCKIK 363


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   SSRPYRCKIK 10
           S+RPYRCKI+
Sbjct: 369 SNRPYRCKIR 378


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   SSRPYRCKIK 10
           S+RPYRCKI+
Sbjct: 347 SNRPYRCKIR 356


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   SSRPYRCKIK 10
           ++RPYRCKI+
Sbjct: 351 TNRPYRCKIR 360


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1   SSRPYRCKIK 10
           ++RPYRCKI+
Sbjct: 345 TNRPYRCKIR 354


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   SSRPYRCKIK 10
           +S+PYRCKI+
Sbjct: 353 TSKPYRCKIR 362


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1   SSRPYRCKIK 10
           S++PYRCKI+
Sbjct: 349 SNKPYRCKIR 358


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1   SSRPYRCKIK 10
           S++PYRCKI+
Sbjct: 349 SNKPYRCKIR 358


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1   SSRPYRCKIK 10
           S++PYRCKI+
Sbjct: 349 SNKPYRCKIR 358


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   SSRPYRCKIK 10
           ++RPYRCKI+
Sbjct: 351 TNRPYRCKIR 360


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1   SSRPYRCKIK 10
           S++PYRCKI+
Sbjct: 349 SNKPYRCKIR 358


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 2   SRPYRCKIK 10
           +RPYRC+IK
Sbjct: 345 NRPYRCRIK 353


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 2   SRPYRCKIK 10
           +RPYRC+IK
Sbjct: 345 NRPYRCRIK 353


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 2   SRPYRCKIK 10
           +RPYRC+IK
Sbjct: 345 NRPYRCRIK 353


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 2   SRPYRCKIK 10
           +RPYRC+IK
Sbjct: 345 NRPYRCRIK 353


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 2   SRPYRCKIK 10
           +RPYRC+IK
Sbjct: 345 NRPYRCRIK 353


>sp|NUOD_RHIWR|NADH-QUINONE oxidoreductase subunit D|Rhizorhabdus wittichii (strain DSM 6014

Query: 1   SSRPYRCKIK 10
           S++PYRCKI+
Sbjct: 359 SNKPYRCKIR 368


>sp|NUOD_NOVAD|NADH-QUINONE oxidoreductase subunit D|Novosphingobium aromaticivorans (strain

Query: 1   SSRPYRCKIK 10
           S++PYRCKI+
Sbjct: 356 SNKPYRCKIR 365


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 2   SRPYRCKIK 10
           +RPYRC+IK
Sbjct: 345 NRPYRCRIK 353


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 2   SRPYRCKIK 10
           +RPYRC+IK
Sbjct: 345 NRPYRCRIK 353


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1   SSRPYRCKIK 10
           +++PYRCKIK
Sbjct: 369 TNKPYRCKIK 378


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   SSRPYRCKIK 10
           ++RPYRC+IK
Sbjct: 349 TNRPYRCRIK 358


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   SSRPYRCKIK 10
           ++RPYRC+IK
Sbjct: 349 TNRPYRCRIK 358


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1   SSRPYRCKIK 10
           +++PYRC+IK
Sbjct: 359 TAKPYRCRIK 368


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1   SSRPYRCKIK 10
           +++PYRC+IK
Sbjct: 359 TAKPYRCRIK 368


>sp|NDUS2_PARTE|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Paramecium tetraurelia

Query: 1   SSRPYRCKIK 10
           S++PYRCK++
Sbjct: 353 SNKPYRCKVR 362


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   SSRPYRCKIK 10
           S++PYRCK++
Sbjct: 349 SNKPYRCKLR 358


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   SSRPYRCKIK 10
           S++PYRCK++
Sbjct: 349 SNKPYRCKLR 358


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   SSRPYRCKIK 10
           S++PYRCK++
Sbjct: 349 SNKPYRCKLR 358


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   SSRPYRCKIK 10
           S++PYRCK++
Sbjct: 349 SNKPYRCKLR 358


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   SSRPYRCKIK 10
           S++PYRCK++
Sbjct: 349 SNKPYRCKLR 358


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1   SSRPYRCKIK 10
           S++PYRCK++
Sbjct: 349 SNKPYRCKLR 358


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1   SSRPYRCKIK 10
           +++PYRCKI+
Sbjct: 349 TNKPYRCKIR 358


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1   SSRPYRCKIK 10
           +++PYRCKI+
Sbjct: 349 TNKPYRCKIR 358


>sp|NUOD_ERYLH|NADH-QUINONE oxidoreductase subunit D|Erythrobacter litoralis (strain HTCC2594)

Query: 1   SSRPYRCKIK 10
           +++PYRCKI+
Sbjct: 356 TNKPYRCKIR 365


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1   SSRPYRCKIK 10
           +++PYRCKI+
Sbjct: 349 TNKPYRCKIR 358


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1   SSRPYRCKIK 10
           +++PYRCKI+
Sbjct: 349 TNKPYRCKIR 358


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   SSRPYRCKIK 10
           +++PYRCKI+
Sbjct: 358 TNKPYRCKIR 367


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   SSRPYRCKIK 10
           ++RPYRC+I+
Sbjct: 343 TNRPYRCRIR 352


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1   SSRPYRCKIK 10
           +++PYRCKI+
Sbjct: 349 TNKPYRCKIR 358


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   SSRPYRCKIK 10
           ++RPYRC+I+
Sbjct: 343 TNRPYRCRIR 352


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   SSRPYRCKIK 10
           ++RPYRC+I+
Sbjct: 343 TNRPYRCRIR 352


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   SSRPYRCKIK 10
           S++P+RCKIK
Sbjct: 351 SNQPFRCKIK 360


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1   SSRPYRCKIK 10
           +++PYRCKI+
Sbjct: 349 TNKPYRCKIR 358


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1   SSRPYRCKIK 10
           +++PYRCKI+
Sbjct: 355 TNKPYRCKIR 364


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1   SSRPYRCKIK 10
           +++PYRCKI+
Sbjct: 355 TNKPYRCKIR 364


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain TIE-1)

Query: 1   SSRPYRCKIK 10
           S++PY+CKI+
Sbjct: 355 SNKPYKCKIR 364


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1   SSRPYRCKIK 10
           S++PY+CKI+
Sbjct: 355 SNKPYKCKIR 364


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1   SSRPYRCKIK 10
           S++PY+CKI+
Sbjct: 351 SNKPYKCKIR 360


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1   SSRPYRCKIK 10
           S++PY+CKI+
Sbjct: 355 SNKPYKCKIR 364


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC BAA-705

Query: 1   SSRPYRCKIK 10
           +++PYRCKI+
Sbjct: 349 TNKPYRCKIR 358


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1   SSRPYRCKIK 10
           S++PY+CKI+
Sbjct: 355 SNKPYKCKIR 364


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   SSRPYRCKIK 10
           +S+PY+CKI+
Sbjct: 344 TSKPYKCKIR 353


>sp|708C2_FAGES|UDP-GLYCOSYLTRANSFERASE 708C2|Fagopyrum esculentum (Common buckwheat) (Polygonum

Query: 1  SSRPYRCKI 9
          SS PYRCK+
Sbjct: 44 SSAPYRCKV 52


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB18)

Query: 1   SSRPYRCKIK 10
           S++PY+CKI+
Sbjct: 349 SNKPYKCKIR 358


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB5)

Query: 1   SSRPYRCKIK 10
           S++PY+CKI+
Sbjct: 369 SNKPYKCKIR 378


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC 19089

Query: 1   SSRPYRCKIK 10
           +++PYRCKI+
Sbjct: 351 TNKPYRCKIR 360


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1   SSRPYRCKIK 10
           ++RPYRC+I+
Sbjct: 351 TNRPYRCRIR 360


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1   SSRPYRCKIK 10
           +++PYRCKI+
Sbjct: 364 TNKPYRCKIR 373




85|Sequence|421|430|RCKIKAPGFA

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   RCKIKAPGFA 10
           RCKIKAPGFA
Sbjct: 421 RCKIKAPGFA 430


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   RCKIKAPGFA 10
           RCKIKAPGFA
Sbjct: 421 RCKIKAPGFA 430


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   RCKIKAPGFA 10
           RCKIKAPGFA
Sbjct: 421 RCKIKAPGFA 430


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   RCKIKAPGFA 10
           RCKIKAPGFA
Sbjct: 421 RCKIKAPGFA 430


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   RCKIKAPGFA 10
           RCKIKAPGFA
Sbjct: 421 RCKIKAPGFA 430


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   RCKIKAPGFA 10
           RCKIKAPGFA
Sbjct: 421 RCKIKAPGFA 430


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   RCKIKAPGFA 10
           RCKIKAPGFA
Sbjct: 421 RCKIKAPGFA 430


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1   RCKIKAPGFA 10
           RC+IKAPGFA
Sbjct: 347 RCRIKAPGFA 356


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1   RCKIKAPGFA 10
           RC+IKAPGFA
Sbjct: 349 RCRIKAPGFA 358


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1   RCKIKAPGFA 10
           RC+IKAPGFA
Sbjct: 349 RCRIKAPGFA 358


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1   RCKIKAPGFA 10
           RC+IKAPGFA
Sbjct: 347 RCRIKAPGFA 356


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1   RCKIKAPGFA 10
           RC+IKAPGFA
Sbjct: 349 RCRIKAPGFA 358


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1   RCKIKAPGFA 10
           RC+IKAPGFA
Sbjct: 349 RCRIKAPGFA 358


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1   RCKIKAPGFA 10
           RC+IKAPGFA
Sbjct: 349 RCRIKAPGFA 358


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1   RCKIKAPGFA 10
           RC+IKAPGFA
Sbjct: 349 RCRIKAPGFA 358


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1   RCKIKAPGFA 10
           RC+IKAPGFA
Sbjct: 349 RCRIKAPGFA 358


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   RCKIKAPGFA 10
           RC+IKAPGFA
Sbjct: 354 RCRIKAPGFA 363


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   RCKIKAPGFA 10
           RCKI+APGFA
Sbjct: 358 RCKIRAPGFA 367


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   RCKIKAPGFA 10
           RCKI+APGFA
Sbjct: 352 RCKIRAPGFA 361


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   RCKIKAPGFA 10
           RC+IKAPGFA
Sbjct: 354 RCRIKAPGFA 363


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   RCKIKAPGFA 10
           RCKIKAPGF+
Sbjct: 354 RCKIKAPGFS 363


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   RCKIKAPGFA 10
           RCKIKAPGF+
Sbjct: 356 RCKIKAPGFS 365


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1   RCKIKAPGFA 10
           RCKI+APGFA
Sbjct: 354 RCKIRAPGFA 363


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1   RCKIKAPGFA 10
           RCKI+APGFA
Sbjct: 354 RCKIRAPGFA 363


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1   RCKIKAPGFA 10
           RCKI+APGFA
Sbjct: 354 RCKIRAPGFA 363


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1   RCKIKAPGFA 10
           RCKI+APGFA
Sbjct: 360 RCKIRAPGFA 369


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC BAA-705

Query: 1   RCKIKAPGFA 10
           RCKI+APGFA
Sbjct: 354 RCKIRAPGFA 363


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 1   RCKIKAPGFA 10
           RCKI+APGFA
Sbjct: 354 RCKIRAPGFA 363


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   RCKIKAPGF 9
           RCKIKAPGF
Sbjct: 356 RCKIKAPGF 364


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   RCKIKAPGF 9
           RCKIKAPGF
Sbjct: 359 RCKIKAPGF 367


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1   RCKIKAPGFA 10
           RCKI+APGFA
Sbjct: 360 RCKIRAPGFA 369


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1   RCKIKAPGFA 10
           RCKIKAPGF+
Sbjct: 374 RCKIKAPGFS 383


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   RCKIKAPGFA 10
           RC+I+APGFA
Sbjct: 348 RCRIRAPGFA 357


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   RCKIKAPGFA 10
           RC+I+APGFA
Sbjct: 348 RCRIRAPGFA 357


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1   RCKIKAPGFA 10
           RC+I+APGFA
Sbjct: 351 RCRIRAPGFA 360


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   RCKIKAPGFA 10
           RC+I+APGFA
Sbjct: 348 RCRIRAPGFA 357


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1   RCKIKAPGFA 10
           RCK++APGFA
Sbjct: 354 RCKLRAPGFA 363


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   RCKIKAPGFA 10
           RCK++APGFA
Sbjct: 354 RCKLRAPGFA 363


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   RCKIKAPGFA 10
           RCK++APGFA
Sbjct: 354 RCKLRAPGFA 363


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   RCKIKAPGFA 10
           RCK++APGFA
Sbjct: 354 RCKLRAPGFA 363


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   RCKIKAPGFA 10
           RCK++APGFA
Sbjct: 354 RCKLRAPGFA 363


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   RCKIKAPGFA 10
           RCK++APGFA
Sbjct: 354 RCKLRAPGFA 363


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1   RCKIKAPGFA 10
           RCK++APGFA
Sbjct: 354 RCKLRAPGFA 363


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1   RCKIKAPGFA 10
           RC+IK+PGFA
Sbjct: 349 RCRIKSPGFA 358


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   RCKIKAPGFA 10
           RC+I+APGFA
Sbjct: 351 RCRIRAPGFA 360


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG 29417

Query: 1   RCKIKAPGFA 10
           RCK++APGFA
Sbjct: 354 RCKLRAPGFA 363


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   RCKIKAPGFA 10
           RC+I+APGFA
Sbjct: 351 RCRIRAPGFA 360


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1   RCKIKAPGFA 10
           RC+I+APGFA
Sbjct: 356 RCRIRAPGFA 365


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1   RCKIKAPGFA 10
           RCKI+APG+A
Sbjct: 354 RCKIRAPGYA 363


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1   RCKIKAPGFA 10
           RCKI+APG+A
Sbjct: 354 RCKIRAPGYA 363


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1   RCKIKAPGFA 10
           RCKI+APG+A
Sbjct: 354 RCKIRAPGYA 363


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1   RCKIKAPGFA 10
           RCKI+APG+A
Sbjct: 354 RCKIRAPGYA 363


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1   RCKIKAPGFA 10
           RCKI+APG+A
Sbjct: 354 RCKIRAPGYA 363


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1   RCKIKAPGFA 10
           RCKI+APG+A
Sbjct: 354 RCKIRAPGYA 363


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1   RCKIKAPGFA 10
           RCKI+APG+A
Sbjct: 354 RCKIRAPGYA 363


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   RCKIKAPGFA 10
           RC+I+APGFA
Sbjct: 351 RCRIRAPGFA 360


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1   RCKIKAPGFA 10
           +CKI+APGFA
Sbjct: 356 KCKIRAPGFA 365


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain TIE-1)

Query: 1   RCKIKAPGFA 10
           +CKI+APGFA
Sbjct: 360 KCKIRAPGFA 369


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1   RCKIKAPGFA 10
           +CKI+APGFA
Sbjct: 360 KCKIRAPGFA 369


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1   RCKIKAPGFA 10
           +CKI+APGFA
Sbjct: 356 KCKIRAPGFA 365


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   RCKIKAPGF 9
           RCKI+APGF
Sbjct: 356 RCKIRAPGF 364


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1   RCKIKAPGF 9
           RC+IKAPGF
Sbjct: 364 RCRIKAPGF 372


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1   RCKIKAPGF 9
           RC+IKAPGF
Sbjct: 364 RCRIKAPGF 372


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1   RCKIKAPGFA 10
           RC+IK PGFA
Sbjct: 349 RCRIKTPGFA 358


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisA53)

Query: 1   RCKIKAPGFA 10
           +CKI+APGFA
Sbjct: 354 KCKIRAPGFA 363


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB5)

Query: 1   RCKIKAPGFA 10
           +CKI+APGFA
Sbjct: 374 KCKIRAPGFA 383


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain JCM

Query: 1   RCKIKAPGFA 10
           +CKI+APGFA
Sbjct: 356 KCKIRAPGFA 365


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC 49405

Query: 1   RCKIKAPGFA 10
           +CKI+APGFA
Sbjct: 363 KCKIRAPGFA 372


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1   RCKIKAPGFA 10
           +CKI+APGFA
Sbjct: 360 KCKIRAPGFA 369


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB18)

Query: 1   RCKIKAPGFA 10
           +CKI+APGFA
Sbjct: 354 KCKIRAPGFA 363


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC 19089

Query: 1   RCKIKAPGF 9
           RCKI+APGF
Sbjct: 356 RCKIRAPGF 364


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1   RCKIKAPGFA 10
           +CKI+APGFA
Sbjct: 360 KCKIRAPGFA 369


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1   RCKIKAPGFA 10
           +CK++APGFA
Sbjct: 359 KCKVRAPGFA 368


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1   RCKIKAPGFA 10
           RC+I++PGFA
Sbjct: 353 RCRIRSPGFA 362


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1   RCKIKAPGFA 10
           RCKI+AP FA
Sbjct: 354 RCKIRAPSFA 363


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   RCKIKAPGF 9
           RC+I+APGF
Sbjct: 346 RCRIRAPGF 354


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   RCKIKAPGFA 10
           +CKI+APGF+
Sbjct: 349 KCKIRAPGFS 358


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain DS-1

Query: 1   RCKIKAPGFA 10
           +CKI+APG+A
Sbjct: 350 KCKIRAPGYA 359


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1   RCKIKAPGF 9
           RCKI+APG+
Sbjct: 369 RCKIRAPGY 377


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   RCKIKAPGFA 10
           RC I+APGFA
Sbjct: 440 RCFIRAPGFA 449


>sp|NDHH_CHAGL|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Chaetosphaeridium globosum

Query: 1   RCKIKAPGF 9
           RCKI+ PGF
Sbjct: 349 RCKIRPPGF 357


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1   RCKIKAPGFA 10
           +CKI+AP FA
Sbjct: 354 KCKIRAPSFA 363




86|Sequence|426|435|APGFAHLAGL

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   APGFAHLAGL 10
           APGFAHLAGL
Sbjct: 426 APGFAHLAGL 435


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   APGFAHLAGL 10
           APGFAHLAGL
Sbjct: 426 APGFAHLAGL 435


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   APGFAHLAGL 10
           APGFAHLAGL
Sbjct: 426 APGFAHLAGL 435


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   APGFAHLAGL 10
           APGFAHLAGL
Sbjct: 426 APGFAHLAGL 435


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   APGFAHLAGL 10
           APGFAHLAGL
Sbjct: 426 APGFAHLAGL 435


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   APGFAHLAGL 10
           APGFAHLAGL
Sbjct: 426 APGFAHLAGL 435


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1   APGFAHLAGL 10
           APGF HLAGL
Sbjct: 380 APGFVHLAGL 389


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1   APGFAHLAGL 10
           APGFAHL GL
Sbjct: 352 APGFAHLQGL 361


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1   APGFAHLAGL 10
           APGFAHL GL
Sbjct: 352 APGFAHLQGL 361


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   APGFAHLAGL 10
           APGFAHL GL
Sbjct: 359 APGFAHLQGL 368


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   APGFAHLAGL 10
           APGFAHL GL
Sbjct: 359 APGFAHLQGL 368


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   APGFAHLAGL 10
           APGFAHL GL
Sbjct: 363 APGFAHLQGL 372


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   APGFAHLAGL 10
           APGFAHL GL
Sbjct: 357 APGFAHLQGL 366


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1   APGFAHLAGL 10
           APGFAHL GL
Sbjct: 354 APGFAHLQGL 363


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1   APGFAHLAGL 10
           APGFAHL GL
Sbjct: 354 APGFAHLQGL 363


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1   APGFAHLAGL 10
           APGFAHL GL
Sbjct: 354 APGFAHLQGL 363


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1   APGFAHLAGL 10
           APGFAHL GL
Sbjct: 354 APGFAHLQGL 363


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1   APGFAHLAGL 10
           APGFAHL GL
Sbjct: 354 APGFAHLQGL 363


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1   APGFAHLAGL 10
           APGFAHL GL
Sbjct: 354 APGFAHLQGL 363


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1   APGFAHLAGL 10
           APGFAHL GL
Sbjct: 354 APGFAHLQGL 363


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLAAL 389


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLASL 389


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLAAL 389


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLAAL 389


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLAAL 389


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM 17343

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLAAL 389


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   APGFAHLAGL 10
           APGFAHL G+
Sbjct: 381 APGFAHLQGM 390


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   APGFAHLAGL 10
           APGFAHL G+
Sbjct: 381 APGFAHLQGM 390


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   APGFAHLAGL 10
           APGFAHL G+
Sbjct: 381 APGFAHLQGM 390


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   APGFAHLAGL 10
           APGFAHL G+
Sbjct: 381 APGFAHLQGM 390


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1   APGFAHLAGL 10
           APGFAHLA +
Sbjct: 380 APGFAHLAAM 389


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLASL 389


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   APGFAHLAGL 10
           APGFAHLA +
Sbjct: 380 APGFAHLAAM 389


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   APGFAHLAGL 10
           APGFAHLA +
Sbjct: 380 APGFAHLAAM 389


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLASL 389


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLASL 389


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLASL 389


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLASL 389


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLASL 389


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1   APGFAHLAGL 10
           APGFAHLA +
Sbjct: 380 APGFAHLAAM 389


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLATL 389


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   APGFAHLAGL 10
           APGF+HL GL
Sbjct: 359 APGFSHLQGL 368


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   APGFAHLAGL 10
           APGFAHL G+
Sbjct: 381 APGFAHLQGM 390


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   APGFAHLAGL 10
           APGFAHL G+
Sbjct: 381 APGFAHLQGM 390


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLASL 389


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLASL 389


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLASL 389


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1   APGFAHLAGL 10
           +PGFAHL GL
Sbjct: 354 SPGFAHLQGL 363


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1   APGFAHLAGL 10
           APGFAHLA +
Sbjct: 380 APGFAHLAAM 389


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   APGFAHLAGL 10
           APGFAHLA +
Sbjct: 365 APGFAHLAAM 374


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLATL 389


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 426 APGFAHLASL 435


>sp|DZAN1_MACFA|DOUBLE zinc ribbon and ankyrin|Macaca fascicularis (Crab-eating macaque)

Query: 1   APGFAHLAGL 10
           +PGFAH++GL
Sbjct: 201 SPGFAHISGL 210


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   APGFAHLAGL 10
           APGFAHLA +
Sbjct: 445 APGFAHLAAI 454


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   APGFAHLAGL 10
           APGF+HL GL
Sbjct: 361 APGFSHLQGL 370


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 2   PGFAHLAGL 10
           PGFAHL GL
Sbjct: 355 PGFAHLQGL 363


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   APGFAHLAGL 10
           APGFAHLA +
Sbjct: 380 APGFAHLAAM 389


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   APGFAHLAGL 10
           APGFAHL+ L
Sbjct: 399 APGFAHLSSL 408


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1   APGFAHLAGL 10
           APGF HLA L
Sbjct: 380 APGFVHLAAL 389


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   APGFAHLAGL 10
           APG+AHLA L
Sbjct: 380 APGYAHLAAL 389


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1   APGFAHLAGL 10
           APGF HL GL
Sbjct: 380 APGFPHLQGL 389


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   APGFAHLAGL 10
           APGF HL GL
Sbjct: 361 APGFLHLQGL 370


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1   APGFAHLAGL 10
           APGF HL GL
Sbjct: 369 APGFLHLQGL 378


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1   APGFAHLAGL 10
           APGF HL GL
Sbjct: 369 APGFLHLQGL 378


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1   APGFAHLAGL 10
           APGF HLA L
Sbjct: 380 APGFVHLAAL 389


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   APGFAHLAGL 10
           APGFAHL G 
Sbjct: 441 APGFAHLGGF 450


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1   APGFAHLAGL 10
           APGF HL GL
Sbjct: 380 APGFPHLQGL 389


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain EF01-2)

Query: 1   APGFAHLAGL 10
           APGFAHLA L
Sbjct: 380 APGFAHLATL 389




87|Sequence|431|440|HLAGLDKMSK

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   HLAGLDKMSK 10
           HLAGLDKMSK
Sbjct: 431 HLAGLDKMSK 440


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   HLAGLDKMSK 10
           HLAGLDKMSK
Sbjct: 431 HLAGLDKMSK 440


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   HLAGLDKMSK 10
           HLAGLDKMSK
Sbjct: 431 HLAGLDKMSK 440


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   HLAGLDKMSK 10
           HLAGLDKMSK
Sbjct: 431 HLAGLDKMSK 440


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   HLAGLDKMSK 10
           HLAGLDKMSK
Sbjct: 431 HLAGLDKMSK 440


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   HLAGLDKMSK 10
           HLAGLDKMSK
Sbjct: 431 HLAGLDKMSK 440


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   HLAGLDKMSK 10
           HLA LDKMSK
Sbjct: 431 HLASLDKMSK 440


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1   HLAGLDKMSK 10
           HLAGLD+MS+
Sbjct: 385 HLAGLDEMSR 394




88|Sequence|436|445|DKMSKGHMLA

>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   DKMSKGHMLA 10
           DKMSKGHMLA
Sbjct: 436 DKMSKGHMLA 445


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   DKMSKGHMLA 10
           DKMSKGHMLA
Sbjct: 436 DKMSKGHMLA 445


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   DKMSKGHMLA 10
           DKMSKGHMLA
Sbjct: 436 DKMSKGHMLA 445


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   DKMSKGHMLA 10
           DKMSKGHMLA
Sbjct: 436 DKMSKGHMLA 445


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   DKMSKGHMLA 10
           DKMSKGHMLA
Sbjct: 436 DKMSKGHMLA 445


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   DKMSKGHMLA 10
           DKMSKGHMLA
Sbjct: 436 DKMSKGHMLA 445


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   DKMSKGHMLA 10
           DKMSKGHMLA
Sbjct: 436 DKMSKGHMLA 445


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1   DKMSKGHMLA 10
           D MSKGHMLA
Sbjct: 365 DMMSKGHMLA 374


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   DKMSKGHMLA 10
           D MSKGHMLA
Sbjct: 378 DMMSKGHMLA 387


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   DKMSKGHMLA 10
           D MSKGHMLA
Sbjct: 371 DFMSKGHMLA 380


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   DKMSKGHMLA 10
           D MSKGHMLA
Sbjct: 375 DYMSKGHMLA 384


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain DSM

Query: 1   DKMSKGHMLA 10
           D+MS+GHMLA
Sbjct: 390 DEMSRGHMLA 399


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   DKMSKGHMLA 10
           D+M+KGHMLA
Sbjct: 391 DEMAKGHMLA 400


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   DKMSKGHMLA 10
           D+M+KGHMLA
Sbjct: 391 DEMAKGHMLA 400


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   DKMSKGHMLA 10
           D+M+KGHMLA
Sbjct: 391 DEMAKGHMLA 400


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 1   DKMSKGHMLA 10
           D+MS+GHMLA
Sbjct: 390 DEMSRGHMLA 399


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   DKMSKGHMLA 10
           D+M+KGHMLA
Sbjct: 391 DEMAKGHMLA 400


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   DKMSKGHMLA 10
           D+M+KGHMLA
Sbjct: 391 DEMAKGHMLA 400


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   DKMSKGHMLA 10
           D+M+KGHMLA
Sbjct: 391 DEMAKGHMLA 400


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   DKMSKGHMLA 10
           D M+KGHMLA
Sbjct: 366 DMMAKGHMLA 375


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1   DKMSKGHMLA 10
           D+MS+GHM+A
Sbjct: 390 DEMSRGHMIA 399


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   DKMSKGHMLA 10
           D M+KGHMLA
Sbjct: 366 DMMAKGHMLA 375


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   DKMSKGHMLA 10
           D+MS+GHM+A
Sbjct: 390 DEMSRGHMIA 399


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   DKMSKGHMLA 10
           D M+KGHMLA
Sbjct: 366 DMMAKGHMLA 375


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1   DKMSKGHMLA 10
           D+MS+GHM+A
Sbjct: 390 DEMSRGHMIA 399


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   DKMSKGHMLA 10
           D+MS+GHM+A
Sbjct: 390 DEMSRGHMIA 399


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain CJ2)

Query: 1   DKMSKGHMLA 10
           D+MS+GHM+A
Sbjct: 390 DEMSRGHMIA 399


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   DKMSKGHMLA 10
           D+MS+GHM+A
Sbjct: 390 DEMSRGHMIA 399


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   DKMSKGHMLA 10
           D+M+KGHM+A
Sbjct: 390 DEMTKGHMIA 399


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1   DKMSKGHMLA 10
           D+M+KGHM+A
Sbjct: 390 DEMAKGHMIA 399


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1   DKMSKGHMLA 10
           D+MS+GHM+A
Sbjct: 390 DEMSRGHMIA 399


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1   DKMSKGHMLA 10
           D+MS+GHM+A
Sbjct: 391 DEMSRGHMIA 400




89|Sequence|441|450|GHMLADVVAI

>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 441 GHMLADVVAI 450


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 441 GHMLADVVAI 450


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 441 GHMLADVVAI 450


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 441 GHMLADVVAI 450


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus auratus

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 116 GHMLADVVAI 125


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 441 GHMLADVVAI 450


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 441 GHMLADVVAI 450


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 441 GHMLADVVAI 450


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 395 GHMLADVVAI 404


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 395 GHMLADVVAI 404


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 396 GHMLADVVAI 405


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 396 GHMLADVVAI 405


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 396 GHMLADVVAI 405


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 396 GHMLADVVAI 405


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 396 GHMLADVVAI 405


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   GHMLADVVAI 10
           GHMLADVVAI
Sbjct: 396 GHMLADVVAI 405


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   GHMLADVVAI 10
           GHM+ADVVAI
Sbjct: 395 GHMIADVVAI 404


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   GHMLADVVAI 10
           GHM+ADVVAI
Sbjct: 395 GHMIADVVAI 404


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   GHMLADVVAI 10
           GHMLADVVA+
Sbjct: 414 GHMLADVVAM 423


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   GHMLADVVAI 10
           GHM+ADVVAI
Sbjct: 395 GHMIADVVAI 404


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1   GHMLADVVAI 10
           GHM+ADVVAI
Sbjct: 395 GHMIADVVAI 404


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   GHMLADVVAI 10
           GHMLAD VAI
Sbjct: 376 GHMLADTVAI 385


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   GHMLADVVAI 10
           GHM+ADVVAI
Sbjct: 395 GHMIADVVAI 404


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1   GHMLADVVAI 10
           GHMLADVVA+
Sbjct: 413 GHMLADVVAM 422


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1   GHMLADVVAI 10
           GHMLADVVA+
Sbjct: 413 GHMLADVVAM 422


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 368 GHMLADVAAI 377


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1   GHMLADVVA 9
           GHMLADVVA
Sbjct: 370 GHMLADVVA 378


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 368 GHMLADVAAI 377


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1   GHMLADVVAI 10
           GHMLAD VAI
Sbjct: 395 GHMLADAVAI 404


>sp|NUOD2_THEYD|NADH-QUINONE oxidoreductase subunit D 2|Thermodesulfovibrio yellowstonii (strain

Query: 1   GHMLADVVAI 10
           GH+LADV+AI
Sbjct: 379 GHLLADVIAI 388


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 389 GHMLADVSAI 398


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1   GHMLADVVA 9
           GHMLADVVA
Sbjct: 370 GHMLADVVA 378


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   GHMLADVVAI 10
           GHMLAD+ AI
Sbjct: 368 GHMLADIAAI 377


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1   GHMLADVVAI 10
           GHM+AD+VAI
Sbjct: 395 GHMIADLVAI 404


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1   GHMLADVVAI 10
           GHM+AD+VAI
Sbjct: 395 GHMIADLVAI 404


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1   GHMLADVVAI 10
           GHM+AD+VAI
Sbjct: 395 GHMIADLVAI 404


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1   GHMLADVVAI 10
           GHM+AD+VAI
Sbjct: 395 GHMIADLVAI 404


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1   GHMLADVVAI 10
           GHM+AD+VAI
Sbjct: 395 GHMIADLVAI 404


>sp|NUOD_METI4|NADH-QUINONE oxidoreductase subunit D|Methylacidiphilum infernorum (isolate V4)

Query: 1   GHMLADVVAI 10
           GH+L+DVVAI
Sbjct: 396 GHLLSDVVAI 405


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   GHMLADVVAI 10
           GHM+ADVV I
Sbjct: 379 GHMIADVVTI 388


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1   GHMLADVVAI 10
           GHM+ADVVAI
Sbjct: 395 GHMIADVVAI 404


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   GHMLADVVAI 10
           GHM+ADVVAI
Sbjct: 395 GHMIADVVAI 404


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 374 GHMLADVSAI 383


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1   GHMLADVVAI 10
           GHM+AD+VAI
Sbjct: 395 GHMIADLVAI 404


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 374 GHMLADVSAI 383


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   GHMLADVVAI 10
           GHMLAD VA+
Sbjct: 456 GHMLADAVAV 465


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd 1222)

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 390 GHMLADVPAI 399


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 374 GHMLADVSAI 383


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 374 GHMLADVSAI 383


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 374 GHMLADVSAI 383


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 390 GHMLADVPAI 399


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 374 GHMLADVSAI 383


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 374 GHMLADVSAI 383


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 374 GHMLADVSAI 383


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 374 GHMLADVSAI 383


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 374 GHMLADVSAI 383


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 380 GHMLADVSAI 389


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   GHMLADVVAI 10
           GHM+AD VAI
Sbjct: 395 GHMIADAVAI 404


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain DS-1

Query: 1   GHMLADVVAI 10
           GHMLADV AI
Sbjct: 370 GHMLADVSAI 379


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   GHMLADVVAI 10
           GHM+ADVV I
Sbjct: 374 GHMIADVVTI 383


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1   GHMLADVVAI 10
           GHM+ADVV I
Sbjct: 395 GHMIADVVTI 404


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   GHMLADVVAI 10
           GHM+AD VAI
Sbjct: 395 GHMIADAVAI 404




90|Sequence|446|455|DVVAIIGTQD

>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 400 DVVAIIGTQD 409


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 400 DVVAIIGTQD 409


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 401 DVVAIIGTQD 410


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 401 DVVAIIGTQD 410


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 401 DVVAIIGTQD 410


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 400 DVVAIIGTQD 409


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 400 DVVAIIGTQD 409


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 446 DVVAIIGTQD 455


>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 446 DVVAIIGTQD 455


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 446 DVVAIIGTQD 455


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 446 DVVAIIGTQD 455


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 446 DVVAIIGTQD 455


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 446 DVVAIIGTQD 455


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 446 DVVAIIGTQD 455


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 400 DVVAIIGTQD 409


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 401 DVVAIIGTQD 410


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 401 DVVAIIGTQD 410


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 401 DVVAIIGTQD 410


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus auratus

Query: 1   DVVAIIGTQD 10
           DVVAIIGTQD
Sbjct: 121 DVVAIIGTQD 130


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1   DVVAIIGTQD 10
           D+VAIIGTQD
Sbjct: 400 DLVAIIGTQD 409


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   DVVAIIGTQD 10
           D+VAIIGTQD
Sbjct: 400 DLVAIIGTQD 409


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1   DVVAIIGTQD 10
           DVV IIGTQD
Sbjct: 400 DVVTIIGTQD 409


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1   DVVAIIGTQD 10
           DVV IIGTQD
Sbjct: 400 DVVTIIGTQD 409


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   DVVAIIGTQD 10
           DVV IIGTQD
Sbjct: 379 DVVTIIGTQD 388


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   DVVAIIGTQD 10
           DVV IIGTQD
Sbjct: 381 DVVTIIGTQD 390


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   DVVAIIGTQD 10
           DVV IIGTQD
Sbjct: 383 DVVTIIGTQD 392


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   DVVAIIGTQD 10
           DVV IIGTQD
Sbjct: 377 DVVTIIGTQD 386


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   DVVAIIGTQD 10
           DVV IIGTQD
Sbjct: 381 DVVTIIGTQD 390


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   DVVAIIGTQD 10
           DVV IIGTQD
Sbjct: 381 DVVTIIGTQD 390


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   DVVAIIGTQD 10
           DVV IIGTQD
Sbjct: 377 DVVTIIGTQD 386


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   DVVAIIGTQD 10
           DVV IIGTQD
Sbjct: 384 DVVTIIGTQD 393


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1   DVVAIIGTQD 10
           D+VAIIGTQD
Sbjct: 400 DLVAIIGTQD 409


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1   DVVAIIGTQD 10
           DVVAIIGT D
Sbjct: 400 DVVAIIGTMD 409


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   DVVAIIGTQD 10
           DVVAIIGT D
Sbjct: 400 DVVAIIGTMD 409


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   DVVAIIGTQD 10
           DVVAIIGT D
Sbjct: 400 DVVAIIGTMD 409




91|Sequence|451|463|IGTQDIVFGEVDR

>sp|NDUS2_PONPY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pongo pygmaeus

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 451 IGTQDIVFGEVDR 463


>sp|NDUS2_PANTR|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Pan troglodytes

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 451 IGTQDIVFGEVDR 463


>sp|NDUS2_NEPOL|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nephroselmis

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 386 IGTQDIVFGEVDR 398


>sp|NDUS2_HUMAN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Homo sapiens (Human)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 451 IGTQDIVFGEVDR 463


>sp|NDUS2_GORGO|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Gorilla gorilla

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 451 IGTQDIVFGEVDR 463


>sp|NDUS2_BOVIN|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Bos taurus (Bovine)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 451 IGTQDIVFGEVDR 463


>sp|NDUS2_ARATH|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Arabidopsis thaliana

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 382 IGTQDIVFGEVDR 394


>sp|NDUS2_CAFRO|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Cafeteria roenbergensis (Marine

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 386 IGTQDIVFGEVDR 398


>sp|NDUS2_RAT|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Rattus norvegicus

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 451 IGTQDIVFGEIDR 463


>sp|NDUS2_PROWI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Prototheca wickerhamii

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 388 IGTQDIVFGEVDR 400


>sp|NDUS2_MOUSE|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mus musculus (Mouse)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 451 IGTQDIVFGEIDR 463


>sp|NDUS2_ACACA|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Acanthamoeba castellanii (Amoeba)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 389 IGTQDIVFGEIDR 401


>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 405 IGTQDIVFGEVDR 417


>sp|NDUS2_RECAM|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Reclinomonas americana

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 384 IGTQDIVFGEVDR 396


>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain DSM

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 405 IGTQDIVFGEVDR 417


>sp|NDUS2_PYLLI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Pylaiella littoralis (Seaweed)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 386 IGTQDIVFGEVDR 398


>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain LB400)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 405 IGTQDIVFGEVDR 417


>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 405 IGTQDIVFGEVDR 417


>sp|NUOD_ALKEH|NADH-QUINONE oxidoreductase subunit D|Alkalilimnicola ehrlichii (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BORPE|NADH-QUINONE oxidoreductase subunit D|Bordetella pertussis (strain Tohama I

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 406 IGTQDIVFGEIDR 418


>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C (strain

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 406 IGTQDIVFGEVDR 418


>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NDUS2_DICDI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium discoideum (Social

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 394 IGTQDIVFGEVDR 406


>sp|NDUS2_DICCI|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Dictyostelium citrinum (Slime mold)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 394 IGTQDIVFGEVDR 406


>sp|NUOD_BORPA|NADH-QUINONE oxidoreductase subunit D|Bordetella parapertussis (strain 12822 /

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 406 IGTQDIVFGEIDR 418


>sp|NUOD_BORBR|NADH-QUINONE oxidoreductase subunit D|Bordetella bronchiseptica (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 406 IGTQDIVFGEIDR 418


>sp|NUOD_BORA1|NADH-QUINONE oxidoreductase subunit D|Bordetella avium (strain 197N)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 406 IGTQDIVFGEIDR 418


>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 406 IGTQDIVFGEVDR 418


>sp|NUOD_BORPD|NADH-QUINONE oxidoreductase subunit D|Bordetella petrii (strain ATCC BAA-461

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 406 IGTQDIVFGEIDR 418


>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 406 IGTQDIVFGEVDR 418


>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 406 IGTQDIVFGEVDR 418


>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC 700825

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 406 IGTQDIVFGEVDR 418


>sp|NUOD_THIDA|NADH-QUINONE oxidoreductase subunit D|Thiobacillus denitrificans (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_CUPPJ|NADH-QUINONE oxidoreductase subunit D|Cupriavidus pinatubonensis (strain JMP 134

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain DSM

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_CUPNH|NADH-QUINONE oxidoreductase subunit D|Cupriavidus necator (strain ATCC 17699

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_CUPTR|NADH-QUINONE oxidoreductase subunit D|Cupriavidus taiwanensis (strain DSM 17343

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_NITMU|NADH-QUINONE oxidoreductase subunit D|Nitrosospira multiformis (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_NITEU|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas europaea (strain ATCC 19718

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B (strain

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGEVDR
Sbjct: 406 IGTQDIVFGEVDR 418


>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain K96243)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_NITEC|NADH-QUINONE oxidoreductase subunit D|Nitrosomonas eutropha (strain DSM 101675

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 405 IGTQDIVFGEIDR 417


>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.

Query: 1   IGTQDIVFGEVDR 13
           IGTQD+VFGE+DR
Sbjct: 405 IGTQDVVFGEIDR 417


>sp|NUOD_DECAR|NADH-QUINONE oxidoreductase subunit D|Dechloromonas aromatica (strain RCB)

Query: 1   IGTQDIVFGEVDR 13
           IG+QDIVFGE+DR
Sbjct: 405 IGSQDIVFGEIDR 417


>sp|NDUS2_MESAU|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Mesocricetus auratus

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIVFGE+DR
Sbjct: 126 IGTQDIVFGEIDR 138


>sp|NDUS2_CAEEL|PROBABLE NADH dehydrogenase [ubiquinone] iron-sulfur|Caenorhabditis elegans

Query: 1   IGTQDIVFGEVDR 13
           IGT DIVFGEVDR
Sbjct: 470 IGTMDIVFGEVDR 482


>sp|NUOD_VEREI|NADH-QUINONE oxidoreductase subunit D|Verminephrobacter eiseniae (strain EF01-2)

Query: 1   IGTQDIVFGEVDR 13
           IGT DIVFGE+DR
Sbjct: 405 IGTMDIVFGEIDR 417


>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain CJ2)

Query: 1   IGTQDIVFGEVDR 13
           IGT DIVFGE+DR
Sbjct: 405 IGTMDIVFGEIDR 417


>sp|NUOD1_STRM5|NADH-QUINONE oxidoreductase subunit D 1|Stenotrophomonas maltophilia (strain

Query: 1   IGTQDIVFGEVDR 13
           IGT DIVFGEVDR
Sbjct: 424 IGTYDIVFGEVDR 436


>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168

Query: 1   IGTQDIVFGEVDR 13
           IGT DIVFGE+DR
Sbjct: 405 IGTMDIVFGEIDR 417


>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)

Query: 1   IGTQDIVFGEVDR 13
           IGT DIVFGE+DR
Sbjct: 405 IGTMDIVFGEIDR 417


>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /

Query: 1   IGTQDIVFGEVDR 13
           IGT DIVFGE+DR
Sbjct: 405 IGTMDIVFGEIDR 417


>sp|NUOD_PARC0|NADH-QUINONE oxidoreductase subunit D|Paracidovorax citrulli (strain AAC00-1)

Query: 1   IGTQDIVFGEVDR 13
           IGT DIVFGE+DR
Sbjct: 405 IGTMDIVFGEIDR 417


>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGT DIVFGE+DR
Sbjct: 405 IGTMDIVFGEIDR 417


>sp|NDUS2_NEUCR|NADH-UBIQUINONE oxidoreductase 49 kDa subunit,|Neurospora crassa (strain ATCC 24698

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 466 IGTMDLVFGEVDR 478


>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707

Query: 1   IGTQDIVFGEVDR 13
           IGT DIVFGE+DR
Sbjct: 405 IGTMDIVFGEIDR 417


>sp|NDUS2_NICSY|NADH dehydrogenase [ubiquinone] iron-sulfur protein|Nicotiana sylvestris

Query: 1   IGTQDIVFGEVDR 13
           IGTQDIV GEVDR
Sbjct: 382 IGTQDIVSGEVDR 394


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 1   IGTQDIVFGEVDR 13
           IGT DIVFGE+DR
Sbjct: 393 IGTMDIVFGEIDR 405


>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 423 IGTYDLVFGEVDR 435


>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 423 IGTYDLVFGEVDR 435


>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 423 IGTYDLVFGEVDR 435


>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 423 IGTYDLVFGEVDR 435


>sp|NUOD_XANOR|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 423 IGTYDLVFGEVDR 435


>sp|NUOD_XANOP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 423 IGTYDLVFGEVDR 435


>sp|NUOD_XANOM|NADH-QUINONE oxidoreductase subunit D|Xanthomonas oryzae pv. oryzae (strain

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 423 IGTYDLVFGEVDR 435


>sp|NUOD_XANE5|NADH-QUINONE oxidoreductase subunit D|Xanthomonas euvesicatoria pv. vesicatoria

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 423 IGTYDLVFGEVDR 435


>sp|NUOD_XANCP|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 423 IGTYDLVFGEVDR 435


>sp|NUOD_XANCB|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 423 IGTYDLVFGEVDR 435


>sp|NUOD_XANC8|NADH-QUINONE oxidoreductase subunit D|Xanthomonas campestris pv. campestris

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 423 IGTYDLVFGEVDR 435


>sp|NUOD_XANAC|NADH-QUINONE oxidoreductase subunit D|Xanthomonas axonopodis pv. citri (strain

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 423 IGTYDLVFGEVDR 435


>sp|NUOD_STRMK|NADH-QUINONE oxidoreductase subunit D|Stenotrophomonas maltophilia (strain

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 423 IGTYDLVFGEVDR 435


>sp|NUOD2_STRM5|NADH-QUINONE oxidoreductase subunit D 2|Stenotrophomonas maltophilia (strain

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGEVDR
Sbjct: 423 IGTYDLVFGEVDR 435


>sp|NDUS2_PARTE|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Paramecium tetraurelia

Query: 1   IGTQDIVFGEVDR 13
           IGT DIVFGE+DR
Sbjct: 388 IGTIDIVFGEIDR 400


>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGE+DR
Sbjct: 405 IGTMDVVFGEIDR 417


>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGE+DR
Sbjct: 405 IGTMDVVFGEIDR 417


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040) (Silicibacter

Query: 1   IGTQDIVFGEVDR 13
           IGT DIVFGE+DR
Sbjct: 391 IGTMDIVFGEIDR 403


>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGE+DR
Sbjct: 392 IGTMDVVFGEIDR 404


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGE+DR
Sbjct: 401 IGTMDVVFGEIDR 413


>sp|NUOD_SULDN|NADH-QUINONE oxidoreductase subunit D|Sulfurimonas denitrificans (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGT +IVFGEVDR
Sbjct: 400 IGTTNIVFGEVDR 412


>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGEVDR
Sbjct: 405 IGSLDIVFGEVDR 417


>sp|NUOD_METPB|NADH-QUINONE oxidoreductase subunit D|Methylorubrum populi (strain ATCC BAA-705

Query: 1   IGTQDIVFGEVDR 13
           +GT DIVFGEVDR
Sbjct: 384 LGTLDIVFGEVDR 396


>sp|NUOD_ROSDO|NADH-QUINONE oxidoreductase subunit D|Roseobacter denitrificans (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGE+DR
Sbjct: 395 IGTMDVVFGEIDR 407


>sp|NUOD_METEP|NADH-QUINONE oxidoreductase subunit D|Methylorubrum extorquens (strain PA1)

Query: 1   IGTQDIVFGEVDR 13
           +GT DIVFGEVDR
Sbjct: 384 LGTLDIVFGEVDR 396


>sp|NUOD_RHOCS|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum centenum (strain ATCC 51521

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGE+DR
Sbjct: 386 IGSMDIVFGEIDR 398


>sp|NUOD_METRJ|NADH-QUINONE oxidoreductase subunit D|Methylobacterium radiotolerans (strain

Query: 1   IGTQDIVFGEVDR 13
           +GT DIVFGEVDR
Sbjct: 384 LGTLDIVFGEVDR 396


>sp|NUOD_METS4|NADH-QUINONE oxidoreductase subunit D|Methylobacterium sp. (strain 4-46)

Query: 1   IGTQDIVFGEVDR 13
           +GT DIVFGEVDR
Sbjct: 384 LGTLDIVFGEVDR 396


>sp|NUOD_WOLPP|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis subsp. Culex pipiens

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGE+DR
Sbjct: 378 IGSLDIVFGEIDR 390


>sp|NUOD_EHRRW|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Welgevonden)

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGE+DR
Sbjct: 381 IGSLDIVFGEIDR 393


>sp|NUOD_EHRRG|NADH-QUINONE oxidoreductase subunit D|Ehrlichia ruminantium (strain Gardel)

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGE+DR
Sbjct: 381 IGSLDIVFGEIDR 393


>sp|NUOD_ANAPZ|NADH-QUINONE oxidoreductase subunit D|Anaplasma phagocytophilum (strain HZ)

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGE+DR
Sbjct: 383 IGSLDIVFGEIDR 395


>sp|NUOD_ANAMM|NADH-QUINONE oxidoreductase subunit D|Anaplasma marginale (strain St. Maries)

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGE+DR
Sbjct: 386 IGSLDIVFGEIDR 398


>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17023

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGE+DR
Sbjct: 392 IGTLDVVFGEIDR 404


>sp|NUOD1_NITHX|NADH-QUINONE oxidoreductase subunit D 1|Nitrobacter hamburgensis (strain DSM

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGE+DR
Sbjct: 384 IGSLDIVFGEIDR 396


>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17029

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGE+DR
Sbjct: 390 IGTLDVVFGEIDR 402


>sp|NUOD2_BEII9|NADH-QUINONE oxidoreductase subunit D 2|Beijerinckia indica subsp. indica

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGE+DR
Sbjct: 384 IGSLDIVFGEIDR 396


>sp|NUOD_WOLTR|NADH-QUINONE oxidoreductase subunit D|Wolbachia sp. subsp. Brugia malayi

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGE+DR
Sbjct: 378 IGSLDIVFGEIDR 390


>sp|NUOD_WOLPM|NADH-QUINONE oxidoreductase subunit D|Wolbachia pipientis wMel

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGE+DR
Sbjct: 378 IGSLDIVFGEIDR 390


>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC 17025

Query: 1   IGTQDIVFGEVDR 13
           IGT D+VFGE+DR
Sbjct: 390 IGTLDVVFGEIDR 402


>sp|NUOD_LEGPL|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Lens)

Query: 1   IGTQDIVFGEVDR 13
           + +QDIVFGE+DR
Sbjct: 405 LASQDIVFGEIDR 417


>sp|NUOD_LEGPH|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila subsp. pneumophila

Query: 1   IGTQDIVFGEVDR 13
           + +QDIVFGE+DR
Sbjct: 405 LASQDIVFGEIDR 417


>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)

Query: 1   IGTQDIVFGEVDR 13
           + +QDIVFGE+DR
Sbjct: 405 LASQDIVFGEIDR 417


>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)

Query: 1   IGTQDIVFGEVDR 13
           + +QDIVFGE+DR
Sbjct: 405 LASQDIVFGEIDR 417


>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGE+DR
Sbjct: 381 IGSLDIVFGEIDR 393


>sp|NUOD_HALHL|NADH-QUINONE oxidoreductase subunit D|Halorhodospira halophila (strain DSM 244

Query: 1   IGTQDIVFGEVDR 13
           IG+ D+VFGEVDR
Sbjct: 405 IGSLDVVFGEVDR 417


>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)

Query: 1   IGTQDIVFGEVDR 13
           +GT DIVFGE+DR
Sbjct: 380 LGTLDIVFGEIDR 392


>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGE+DR
Sbjct: 381 IGSLDIVFGEIDR 393


>sp|NUOD_CAUSK|NADH-QUINONE oxidoreductase subunit D|Caulobacter sp. (strain K31)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 404 LGSLDIVFGEVDR 416


>sp|NUOD_EHRS3|NADH-QUINONE oxidoreductase subunit D|Ehrlichia sennetsu (strain ATCC VR-367

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 376 LGSLDIVFGEVDR 388


>sp|NUOD_GRABC|NADH-QUINONE oxidoreductase subunit D|Granulibacter bethesdensis (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IG+ D+VFGEVDR
Sbjct: 388 IGSLDLVFGEVDR 400


>sp|NUOD_SULNB|NADH-QUINONE oxidoreductase subunit D|Sulfurovum sp. (strain NBC37-1)

Query: 1   IGTQDIVFGEVDR 13
           IG+ +IVFGEVDR
Sbjct: 397 IGSTNIVFGEVDR 409


>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_AZOC5|NADH-QUINONE oxidoreductase subunit D|Azorhizobium caulinodans (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 390 LGSLDIVFGEVDR 402


>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD1_BEII9|NADH-QUINONE oxidoreductase subunit D 1|Beijerinckia indica subsp. indica

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_RICM5|NADH-QUINONE oxidoreductase subunit D|Rickettsia massiliae (strain Mtu5)

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGE+DR
Sbjct: 379 IATLDIVFGEIDR 391


>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG 29417

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_PARL1|NADH-QUINONE oxidoreductase subunit D|Parvibaculum lavamentivorans (strain DS-1

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 380 LGSIDIVFGEVDR 392


>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_ACICJ|NADH-QUINONE oxidoreductase subunit D|Acidiphilium cryptum (strain JF-5)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 394 LGSIDIVFGEVDR 406


>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain JCM

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 386 LGSLDIVFGEVDR 398


>sp|NUOD_RICCN|NADH-QUINONE oxidoreductase subunit D|Rickettsia conorii (strain ATCC VR-613

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGE+DR
Sbjct: 379 IATLDIVFGEIDR 391


>sp|NUOD_RHOPA|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 390 LGSLDIVFGEVDR 402


>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 390 LGSLDIVFGEVDR 402


>sp|NUOD_RICTY|NADH-QUINONE oxidoreductase subunit D|Rickettsia typhi (strain ATCC VR-144

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGE+DR
Sbjct: 377 IATLDIVFGEIDR 389


>sp|NUOD_XANP2|NADH-QUINONE oxidoreductase subunit D|Xanthobacter autotrophicus (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 390 LGSLDIVFGEVDR 402


>sp|NUOD_ORITI|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Ikeda)

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGE+DR
Sbjct: 384 IATLDIVFGEIDR 396


>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 390 LGSLDIVFGEVDR 402


>sp|NUOD_RICRS|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Sheila

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGE+DR
Sbjct: 379 IATLDIVFGEIDR 391


>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd 1222)

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGEVDR
Sbjct: 400 IATLDIVFGEVDR 412


>sp|NUOD_RICBR|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain RML369-C)

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGE+DR
Sbjct: 379 IATLDIVFGEIDR 391


>sp|NUOD_RICB8|NADH-QUINONE oxidoreductase subunit D|Rickettsia bellii (strain OSU 85-389)

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGE+DR
Sbjct: 379 IATLDIVFGEIDR 391


>sp|NUOD_RHOPB|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB18)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_GLUDA|NADH-QUINONE oxidoreductase subunit D|Gluconacetobacter diazotrophicus (strain

Query: 1   IGTQDIVFGEVDR 13
           IG+ D+VFGE+DR
Sbjct: 404 IGSLDLVFGEIDR 416


>sp|NUOD_RICRO|NADH-QUINONE oxidoreductase subunit D|Rickettsia rickettsii (strain Iowa)

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGE+DR
Sbjct: 379 IATLDIVFGEIDR 391


>sp|NUOD_RICCK|NADH-QUINONE oxidoreductase subunit D|Rickettsia canadensis (strain McKiel)

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGE+DR
Sbjct: 379 IATLDIVFGEIDR 391


>sp|NUOD_RICAH|NADH-QUINONE oxidoreductase subunit D|Rickettsia akari (strain Hartford)

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGE+DR
Sbjct: 379 IATLDIVFGEIDR 391


>sp|NUOD_ORITB|NADH-QUINONE oxidoreductase subunit D|Orientia tsutsugamushi (strain Boryong)

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGE+DR
Sbjct: 384 IATLDIVFGEIDR 396


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGEVDR
Sbjct: 400 IATLDIVFGEVDR 412


>sp|NUOD_RHOPT|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain TIE-1)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 390 LGSLDIVFGEVDR 402


>sp|NUOD_RHOP5|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisA53)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 386 LGSLDIVFGEVDR 398


>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain BisB5)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 404 LGSLDIVFGEVDR 416


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 379 LGSLDIVFGEVDR 391


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_RHORT|NADH-QUINONE oxidoreductase subunit D|Rhodospirillum rubrum (strain ATCC 11170

Query: 1   IGTQDIVFGEVDR 13
           IG+ D+VFGE+DR
Sbjct: 380 IGSIDVVFGEIDR 392


>sp|NUOD_BRASB|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain BTAi1 /

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 386 LGSLDIVFGEVDR 398


>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)

Query: 1   IGTQDIVFGEVDR 13
           IG+ D+VFGE+DR
Sbjct: 390 IGSLDVVFGEIDR 402


>sp|NUOD_RICPR|NADH-QUINONE oxidoreductase subunit D|Rickettsia prowazekii (strain Madrid E)

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGE+DR
Sbjct: 377 IATLDIVFGEIDR 389


>sp|NUOD_BART1|NADH-QUINONE oxidoreductase subunit D|Bartonella tribocorum (strain DSM 28219

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSIDIVFGEVDR 396


>sp|NUOD_RICFE|NADH-QUINONE oxidoreductase subunit D|Rickettsia felis (strain ATCC VR-1525

Query: 1   IGTQDIVFGEVDR 13
           I T DIVFGE+DR
Sbjct: 379 IATLDIVFGEIDR 391


>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_PHEZH|NADH-QUINONE oxidoreductase subunit D|Phenylobacterium zucineum (strain HLK1)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGE+DR
Sbjct: 399 LGSLDIVFGEIDR 411


>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 400 LGSLDIVFGEVDR 412


>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 389 LGSLDIVFGEVDR 401


>sp|NUOD_PARM1|NADH-QUINONE oxidoreductase subunit D|Paramagnetospirillum magneticum (strain

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGE+DR
Sbjct: 380 IGSIDIVFGEIDR 392


>sp|NUOD_AFIC5|NADH-QUINONE oxidoreductase subunit D|Afipia carboxidovorans (strain ATCC 49405

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 393 LGSLDIVFGEVDR 405


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_BARQU|NADH-QUINONE oxidoreductase subunit D|Bartonella quintana (strain Toulouse)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSIDIVFGEVDR 396


>sp|NUOD_CAUVC|NADH-QUINONE oxidoreductase subunit D|Caulobacter vibrioides (strain ATCC 19089

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGE+DR
Sbjct: 386 LGSLDIVFGEIDR 398


>sp|NUOD_BARHE|NADH-QUINONE oxidoreductase subunit D|Bartonella henselae (strain ATCC 49882

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSIDIVFGEVDR 396


>sp|NDUS2_NYCOV|NADH-UBIQUINONE oxidoreductase 49 kDa subunit|Nyctotherus ovalis (Ciliate

Query: 1   IGTQDIVFGEVDR 13
           +G+ D+VFGEVDR
Sbjct: 400 LGSIDVVFGEVDR 412


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSLDIVFGEVDR 396


>sp|NUOD_NITSB|NADH-QUINONE oxidoreductase subunit D|Nitratiruptor sp. (strain SB155-2)

Query: 1   IGTQDIVFGEVDR 13
           IG+ +IVFGE+DR
Sbjct: 398 IGSTNIVFGEIDR 410


>sp|NUOD_BARBK|NADH-QUINONE oxidoreductase subunit D|Bartonella bacilliformis (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           +G+ DIVFGEVDR
Sbjct: 384 LGSIDIVFGEVDR 396


>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain

Query: 1   IGTQDIVFGEVDR 13
           + T DIVFGE+DR
Sbjct: 405 LSTMDIVFGEIDR 417


>sp|NUOD1_KORVE|NADH-QUINONE oxidoreductase subunit D 1|Koribacter versatilis (strain Ellin345)

Query: 1   IGTQDIVFGEVDR 13
           IGT DIV GEVDR
Sbjct: 369 IGTLDIVLGEVDR 381


>sp|NUOD_TRIL1|NADH-QUINONE oxidoreductase subunit D|Trichlorobacter lovleyi (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGT DIV GE+DR
Sbjct: 378 IGTLDIVLGEIDR 390


>sp|NUOD_CITBB|NADH-QUINONE oxidoreductase subunit D|Citrifermentans bemidjiense (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGT DIV GE+DR
Sbjct: 377 IGTLDIVLGEIDR 389


>sp|NUOD_GEOUR|NADH-QUINONE oxidoreductase subunit D|Geotalea uraniireducens (strain Rf4)

Query: 1   IGTQDIVFGEVDR 13
           IGT DIV GE+DR
Sbjct: 378 IGTLDIVLGEIDR 390


>sp|NUOD_GEOSL|NADH-QUINONE oxidoreductase subunit D|Geobacter sulfurreducens (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGT DIV GE+DR
Sbjct: 378 IGTLDIVLGEIDR 390


>sp|NUOD_GEOMG|NADH-QUINONE oxidoreductase subunit D|Geobacter metallireducens (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IGT DIV GE+DR
Sbjct: 378 IGTLDIVLGEIDR 390


>sp|NUOD_CHLPM|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeovibrioides (strain DSM 265

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIV GEVDR
Sbjct: 388 IGSLDIVLGEVDR 400


>sp|NUOD_CHLCH|NADH-QUINONE oxidoreductase subunit D|Chlorobium chlorochromatii (strain CaD3)

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIV GEVDR
Sbjct: 388 IGSIDIVLGEVDR 400


>sp|ISRA_AMPFL|NONRIBOSOMAL peptide synthetase isrA|Amphichorda felina (Beauveria felina)

Query: 1    IGTQDIVFGEV 11
            IGT D+VFGEV
Sbjct: 7204 IGTHDVVFGEV 7214


>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIVFGE+DR
Sbjct: 385 IGSIDIVFGEIDR 397


>sp|NUOD_PROA2|NADH-QUINONE oxidoreductase subunit D|Prosthecochloris aestuarii (strain DSM 271

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIV GEVDR
Sbjct: 388 IGSIDIVLGEVDR 400


>sp|NUOD_WOLSU|NADH-QUINONE oxidoreductase subunit D|Wolinella succinogenes (strain ATCC 29543

Query: 1   IGTQDIVFGEVDR 13
           IG  +IVFGE+DR
Sbjct: 396 IGNLNIVFGEIDR 408


>sp|NUOD_CHLPD|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeobacteroides (strain DSM

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIV GEVDR
Sbjct: 388 IGSIDIVLGEVDR 400


>sp|NUOD_CHLL2|NADH-QUINONE oxidoreductase subunit D|Chlorobium limicola (strain DSM 245

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIV GEVDR
Sbjct: 383 IGSIDIVLGEVDR 395


>sp|NUOD_CHLTE|NADH-QUINONE oxidoreductase subunit D|Chlorobaculum tepidum (strain ATCC 49652

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIV GEVDR
Sbjct: 388 IGSIDIVLGEVDR 400


>sp|NUOD_CHLL3|NADH-QUINONE oxidoreductase subunit D|Chlorobium luteolum (strain DSM 273

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIV GEVDR
Sbjct: 383 IGSIDIVLGEVDR 395


>sp|NUOD_PELPB|NADH-QUINONE oxidoreductase subunit D|Pelodictyon phaeoclathratiforme (strain

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIV GEVDR
Sbjct: 388 IGSIDIVLGEVDR 400


>sp|NUOD_CHLP8|NADH-QUINONE oxidoreductase subunit D|Chlorobaculum parvum (strain DSM 263

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIV GEVDR
Sbjct: 388 IGSIDIVLGEVDR 400


>sp|NUOD2_CHLT3|NADH-QUINONE oxidoreductase subunit D 2|Chloroherpeton thalassium (strain ATCC

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIV GEVDR
Sbjct: 387 IGSVDIVLGEVDR 399


>sp|NUOD2_SOLUE|NADH-QUINONE oxidoreductase subunit D 2|Solibacter usitatus (strain Ellin6076)

Query: 1   IGTQDIVFGEVDR 13
           IGT DIV GE+DR
Sbjct: 358 IGTLDIVLGEIDR 370


>sp|NUOD_CHLPB|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeobacteroides (strain BS1)

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIV GEVDR
Sbjct: 388 IGSIDIVLGEVDR 400


>sp|NUOD_AMOA5|NADH-QUINONE oxidoreductase subunit D|Amoebophilus asiaticus (strain 5a2)

Query: 1   IGTQDIVFGEVDR 13
           IG+ DIV GE+DR
Sbjct: 391 IGSIDIVLGEIDR 403


>sp|NUOD_FRATW|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   IGTQDIVFGEVDR 13
           I T D+VFG+VDR
Sbjct: 405 ISTIDVVFGDVDR 417


>sp|NUOD_FRATT|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   IGTQDIVFGEVDR 13
           I T D+VFG+VDR
Sbjct: 405 ISTIDVVFGDVDR 417


>sp|NUOD_FRATO|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   IGTQDIVFGEVDR 13
           I T D+VFG+VDR
Sbjct: 405 ISTIDVVFGDVDR 417


>sp|NUOD_FRATN|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. novicida

Query: 1   IGTQDIVFGEVDR 13
           I T D+VFG+VDR
Sbjct: 405 ISTIDVVFGDVDR 417


>sp|NUOD_FRATM|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. mediasiatica

Query: 1   IGTQDIVFGEVDR 13
           I T D+VFG+VDR
Sbjct: 405 ISTIDVVFGDVDR 417


>sp|NUOD_FRATH|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   IGTQDIVFGEVDR 13
           I T D+VFG+VDR
Sbjct: 405 ISTIDVVFGDVDR 417


>sp|NUOD_FRATF|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. holarctica

Query: 1   IGTQDIVFGEVDR 13
           I T D+VFG+VDR
Sbjct: 405 ISTIDVVFGDVDR 417


>sp|NUOD_FRAT1|NADH-QUINONE oxidoreductase subunit D|Francisella tularensis subsp. tularensis

Query: 1   IGTQDIVFGEVDR 13
           I T D+VFG+VDR
Sbjct: 405 ISTIDVVFGDVDR 417


>sp|NUOD_HELPY|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain ATCC 700392

Query: 1   IGTQDIVFGEVDR 13
           IG+ + VFGEVDR
Sbjct: 397 IGSTNAVFGEVDR 409


>sp|NUOD_HELPS|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain Shi470)

Query: 1   IGTQDIVFGEVDR 13
           IG+ + VFGEVDR
Sbjct: 397 IGSTNAVFGEVDR 409


>sp|NUOD_HELPJ|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain J99 /

Query: 1   IGTQDIVFGEVDR 13
           IG+ + VFGEVDR
Sbjct: 397 IGSTNAVFGEVDR 409


>sp|NUOD_HELPH|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain HPAG1)

Query: 1   IGTQDIVFGEVDR 13
           IG+ + VFGEVDR
Sbjct: 397 IGSTNAVFGEVDR 409


>sp|NUOD_HELPG|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain G27)

Query: 1   IGTQDIVFGEVDR 13
           IG+ + VFGEVDR
Sbjct: 397 IGSTNAVFGEVDR 409


>sp|NUOD_HELP2|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain P12)

Query: 1   IGTQDIVFGEVDR 13
           IG+ + VFGEVDR
Sbjct: 397 IGSTNAVFGEVDR 409


>sp|NUOD_HELAH|NADH-QUINONE oxidoreductase subunit D|Helicobacter acinonychis (strain Sheeba)

Query: 1   IGTQDIVFGEVDR 13
           IG+ + VFGEVDR
Sbjct: 397 IGSTNAVFGEVDR 409


>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)

Query: 1   IGTQDIVFGEVDR 13
           I + DIVFGE+DR
Sbjct: 405 ISSIDIVFGEIDR 417


>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)

Query: 1   IGTQDIVFGEVDR 13
           I + DIVFGE+DR
Sbjct: 405 ISSIDIVFGEIDR 417


>sp|NUOD_FRAP2|NADH-QUINONE oxidoreductase subunit D|Francisella philomiragia subsp.

Query: 1   IGTQDIVFGEVDR 13
           I T D+VFG+VDR
Sbjct: 405 ISTIDVVFGDVDR 417


>sp|NUOD_DELAS|NADH-QUINONE oxidoreductase subunit D|Delftia acidovorans (strain DSM 14801

Query: 1   IGTQDIVFGEVDR 13
           + T DIVFG+VDR
Sbjct: 405 LSTLDIVFGDVDR 417


>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493

Query: 1   IGTQDIVFGEVDR 13
           I + DIVFGE+DR
Sbjct: 405 ISSIDIVFGEIDR 417


>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331

Query: 1   IGTQDIVFGEVDR 13
           I + DIVFGE+DR
Sbjct: 405 ISSIDIVFGEIDR 417


>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway

Query: 1   IGTQDIVFGEVDR 13
           I + DIVFGE+DR
Sbjct: 405 ISSIDIVFGEIDR 417


>sp|NUOD_SPHAL|NADH-QUINONE oxidoreductase subunit D|Sphingopyxis alaskensis (strain DSM 13593

Query: 1   IGTQDIVFGEVDR 13
           IG  D+VFGE DR
Sbjct: 393 IGAIDVVFGECDR 405


>sp|NUOD2_THEYD|NADH-QUINONE oxidoreductase subunit D 2|Thermodesulfovibrio yellowstonii (strain

Query: 1   IGTQDIVFGEVDR 13
           IGT DIV GE DR
Sbjct: 389 IGTLDIVMGEADR 401


>sp|NUOD_CAMHC|NADH-QUINONE oxidoreductase subunit D|Campylobacter hominis (strain ATCC BAA-381

Query: 1   IGTQDIVFGEVDR 13
           IG+ +I+ GEVDR
Sbjct: 396 IGSSNIILGEVDR 408


>sp|NUOD_CAMC5|NADH-QUINONE oxidoreductase subunit D|Campylobacter curvus (strain 525.92)

Query: 1   IGTQDIVFGEVDR 13
           IG+ +I+ GEVDR
Sbjct: 397 IGSTNIILGEVDR 409


>sp|NUOD_CAMC1|NADH-QUINONE oxidoreductase subunit D|Campylobacter concisus (strain 13826)

Query: 1   IGTQDIVFGEVDR 13
           IG+ +I+ GEVDR
Sbjct: 397 IGSTNIILGEVDR 409


>sp|NUOD2_SYMTH|NADH-QUINONE oxidoreductase subunit D 2|Symbiobacterium thermophilum (strain DSM

Query: 1   IGTQDIVFGEVDR 13
           +G+ D+V GEVDR
Sbjct: 372 LGSIDVVLGEVDR 384


>sp|NDHH_ZYGCR|NAD(P)H-QUINONE oxidoreductase subunit H, chloroplastic|Zygnema circumcarinatum

Query: 1   IGTQDIVFGEVDR 13
           +G+ DI+ GEVDR
Sbjct: 381 LGSIDIIMGEVDR 393