NDUS1_HUMAN Blast Output
Viruses
1|Sequence|1|10|MLRIPVRKAL

>sp|POL1_BBWV2|RNA1 polyprotein|Broad bean wilt virus 2

Query: 3 RIPVRKAL 10
R+P+RK L
Sbjct: 1376 RLPIRKVL 1383




2|Sequence|6|15|VRKALVGLSK

***** No hits found ******


3|Sequence|11|20|VGLSKSPKGC

>sp|AN_SHV21|SHUTOFF alkaline exonuclease|Saimiriine herpesvirus 2 (strain 11)

Query: 1 VGLSKSPK 8
+GLS+SPK
Sbjct: 385 IGLSESPK 392


>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 LSKSPKGC 10
L K P+GC
Sbjct: 692 LGKDPRGC 699


>sp|UL33_MUHVS|G-PROTEIN coupled receptor homolog M33|Murid herpesvirus 1 (strain Smith)

Query: 3 LSKSPKGC 10
+S SP+GC
Sbjct: 99 ISSSPEGC 106


>sp|YL004_MIMIV|PUTATIVE KilA-N domain-containing protein L4|Acanthamoeba polyphaga

Query: 4 SKSPKGC 10
SKSPK C
Sbjct: 75 SKSPKKC 81




4|Sequence|16|25|SPKGCVRTTA

>sp|VE2_MMPV1|REGULATORY protein E2|Macaca mulata papillomavirus 1 (Rhpv

Query: 2 PKGCVRTTA 10
PKGC + T
Sbjct: 107 PKGCFKKTG 115


>sp|POLR_PHMV|RNA replicase polyprotein|Physalis mottle virus (PhMV) (Belladonna

Query: 1 SPKGCVR 7
SP GC+R
Sbjct: 39 SPAGCIR 45


>sp|NSP_BGYMV|NUCLEAR shuttle protein|Bean golden yellow mosaic virus

Query: 1 SPKGCVRT 8
SP GC+ T
Sbjct: 140 SPSGCLHT 147


>sp|NSP_BGYMJ|NUCLEAR shuttle protein|Bean golden yellow mosaic virus

Query: 1 SPKGCVRT 8
SP GC+ T
Sbjct: 140 SPSGCLHT 147


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 PKGCVRT 8
P+GCV T
Sbjct: 5756 PEGCVST 5762


>sp|DPOL_HVAVE|DNA polymerase|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 4 GCVRTTA 10
GCV TTA
Sbjct: 351 GCVSTTA 357


>sp|POLN_ELV|NON-STRUCTURAL replication polyprotein|Erysimum latent virus (ELV)

Query: 2 PKGCVR 7
P+GC+R
Sbjct: 1608 PQGCIR 1613


>sp|TGB1_NMV|MOVEMENT and silencing protein TGBp1|Narcissus mosaic virus (NMV)

Query: 5 CVRTTA 10
CVRTTA
Sbjct: 120 CVRTTA 125


>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain

Query: 1 SPKGCVR 7
SP GC R
Sbjct: 162 SPNGCTR 168


>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)

Query: 1 SPKGCVR 7
SP GC R
Sbjct: 162 SPNGCTR 168


>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus

Query: 2 PKGCVRTTA 10
P GC +TTA
Sbjct: 591 PPGCGKTTA 599


>sp|VE2_PAPVE|REGULATORY protein E2|European elk papillomavirus (EEPV)

Query: 1 SPKGCVRTTA 10
+PKGC++ A
Sbjct: 107 APKGCLKKGA 116


>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus

Query: 2 PKGCVRTTA 10
P GC +TTA
Sbjct: 591 PPGCGKTTA 599


>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)

Query: 2 PKGCVRTTA 10
P GC +TTA
Sbjct: 485 PPGCGKTTA 493


>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United

Query: 2 PKGCVRTTA 10
P GC +TTA
Sbjct: 485 PPGCGKTTA 493


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 2 PKGCVRTTA 10
P GC +TTA
Sbjct: 485 PPGCGKTTA 493


>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)

Query: 2 PKGCVRTTA 10
P GC +TTA
Sbjct: 485 PPGCGKTTA 493


>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)

Query: 2 PKGCVRTTA 10
P GC +TTA
Sbjct: 485 PPGCGKTTA 493




5|Sequence|21|30|VRTTATAASN

***** No hits found ******


6|Sequence|26|35|TAASNLIEVF

>sp|YR811_MIMIV|PUTATIVE ariadne-like RING finger protein|Acanthamoeba polyphaga mimivirus

Query: 1 TAASNLIEV 9
TAA+NL++V
Sbjct: 93 TAANNLLDV 101




7|Sequence|31|40|LIEVFVDGQS

>sp|DPOL1_BPK52|DEPOLYMERASE 1, capsule K30/K69-specific|Klebsiella phage K5-2 (Bacteriophage

Query: 2 IEVFVDGQS 10
I VFVDG+S
Sbjct: 656 IGVFVDGES 664


>sp|V29K_TRVSY|29 kDa protein|Tobacco rattle virus (strain SYM)

Query: 2 IEVFVDGQ 9
IE+FVDG+
Sbjct: 25 IELFVDGR 32


>sp|V29K_TRVPS|29 kDa protein|Tobacco rattle virus (strain PSG)

Query: 2 IEVFVDGQ 9
IE+FVDG+
Sbjct: 25 IELFVDGR 32


>sp|MVP_TRVPP|MOVEMENT protein|Tobacco rattle virus (isolate PpK20)

Query: 2 IEVFVDGQ 9
IE+FVDG+
Sbjct: 25 IELFVDGR 32


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2 IEVFVDGQ 9
+EVF DG+
Sbjct: 3149 VEVFTDGK 3156


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 IEVFVDGQ 9
+EVF DG+
Sbjct: 3240 VEVFTDGK 3247


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 IEVFVDGQ 9
+EVF DG+
Sbjct: 3149 VEVFTDGK 3156


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 IEVFVDGQ 9
+EVF DG+
Sbjct: 3240 VEVFTDGK 3247


>sp|Y075_NPVOP|UNCHARACTERIZED 14.9 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 LIEVFVDGQ 9
++++FVDGQ
Sbjct: 50 VLKMFVDGQ 58




8|Sequence|36|45|VDGQSVMVEP

>sp|PAX_I96A3|PROTEIN PA-X|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PAX_I96A2|PROTEIN PA-X|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PAX_I83A1|PROTEIN PA-X|Influenza A virus (strain A/Chile/1/1983

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PAX_I80AA|PROTEIN PA-X|Influenza A virus (strain A/India/6263/1980

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PAX_I67A2|PROTEIN PA-X|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PAX_I61A1|PROTEIN PA-X|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PAX_I56A2|PROTEIN PA-X|Influenza A virus (strain A/Duck/England/1/1956

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PAX_I07A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PAX_I00A1|PROTEIN PA-X|Influenza A virus (strain A/New

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PA_I56A2|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/England/1/1956

Query: 3 GQSVMVEP 10
G+S++VEP
Sbjct: 58 GESIIVEP 65


>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3 GQSVMVEP 10
G+S+++EP
Sbjct: 58 GESIIIEP 65


>sp|PAX_I77AD|PROTEIN PA-X|Influenza A virus (strain A/Swine/Tennessee/26/1977

Query: 3 GQSVMVEP 10
G+S+++EP
Sbjct: 58 GESIIIEP 65


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 1 VDGQSVMVEP 10
VDG+ V V P
Sbjct: 303 VDGERVRVRP 312


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)

Query: 1 VDGQSVMVEP 10
VDG+ V V P
Sbjct: 303 VDGERVRVRP 312




9|Sequence|41|50|VMVEPGTTVL

>sp|KFMS_FSVMD|TYROSINE-PROTEIN kinase transforming protein fms|Feline sarcoma virus (strain

Query: 1 VMVEPGTTV 9
++VEPGTTV
Sbjct: 64 LVVEPGTTV 72


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3 VEPGTTVL 10
V PGTTVL
Sbjct: 6506 VAPGTTVL 6513


>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 VMVEPGTTVL 10
V+V+P TT+L
Sbjct: 138 VVVQPHTTIL 147


>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 VMVEPGTTVL 10
V+V+P TT+L
Sbjct: 138 VVVQPHTTIL 147


>sp|MCE_ASFWA|MRNA-CAPPING enzyme|African swine fever virus (isolate

Query: 1 VMVEPGTTVL 10
++VEPG + L
Sbjct: 407 ILVEPGNSYL 416


>sp|MCE_ASFP4|MRNA-CAPPING enzyme|African swine fever virus (isolate

Query: 1 VMVEPGTTVL 10
++VEPG + L
Sbjct: 407 ILVEPGNSYL 416


>sp|MCE_ASFM2|MRNA-CAPPING enzyme|African swine fever virus (isolate

Query: 1 VMVEPGTTVL 10
++VEPG + L
Sbjct: 407 ILVEPGNSYL 416


>sp|MCE_ASFK5|MRNA-CAPPING enzyme|African swine fever virus (isolate

Query: 1 VMVEPGTTVL 10
++VEPG + L
Sbjct: 407 ILVEPGNSYL 416


>sp|MCE_ASFB7|MRNA-CAPPING enzyme|African swine fever virus (strain

Query: 1 VMVEPGTTVL 10
++VEPG + L
Sbjct: 407 ILVEPGNSYL 416


>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 2 MVEPGTTV 9
+VEPG T+
Sbjct: 250 LVEPGDTI 257


>sp|YR118_MIMIV|UNCHARACTERIZED protein R118|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VEPGTTVL 10
+EPGTT +
Sbjct: 216 LEPGTTTI 223


>sp|VP4_ROTW3|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 1 VMVEPGTT 8
+++EPG T
Sbjct: 106 ILIEPGVT 113


>sp|VP4_ROTB6|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 VMVEPGTT 8
+++EPG T
Sbjct: 106 ILIEPGVT 113


>sp|VP4_ROTB4|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 1 VMVEPGTT 8
+++EPG T
Sbjct: 106 ILIEPGVT 113


>sp|VP4_ROTBV|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Cow/United

Query: 1 VMVEPGTT 8
+++EPG T
Sbjct: 106 ILIEPGVT 113


>sp|POLS_SAV2|STRUCTURAL polyprotein|Alphavirus salmon subtype 2 (SAV2)

Query: 1 VMVEPGTTV 9
V V PGTTV
Sbjct: 557 VRVPPGTTV 565


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 3 VEPGTTVL 10
++PG+T+L
Sbjct: 55 IDPGSTIL 62


>sp|POLS_SAV3|STRUCTURAL polyprotein|Alphavirus salmon subtype 3 (SAV3)

Query: 1 VMVEPGTTV 9
V V PGTTV
Sbjct: 555 VKVPPGTTV 563


>sp|POLS_SAV1|STRUCTURAL polyprotein|Alphavirus salmon subtype 1 (SAV1)

Query: 1 VMVEPGTTV 9
V V PGTTV
Sbjct: 556 VRVPPGTTV 564




10|Sequence|46|55|GTTVLQACEK

>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1 GTTVLQACEK 10
GT +LQAC +
Sbjct: 1268 GTLILQACSQ 1277


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 1 GTTVLQACEK 10
GTT+L+ C K
Sbjct: 162 GTTMLEYCNK 171


>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 1 GTTVLQACEK 10
GTT+L+ C K
Sbjct: 162 GTTMLEYCNK 171


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 1 GTTVLQACEK 10
GTT+L+ C K
Sbjct: 162 GTTMLEYCNK 171


>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 1 GTTVLQACEK 10
GT+VLQ EK
Sbjct: 1181 GTSVLQPWEK 1190


>sp|VF134_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 4 VLQACEK 10
VLQAC K
Sbjct: 38 VLQACRK 44


>sp|ETFL_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 4 VLQACEK 10
VLQAC K
Sbjct: 38 VLQACRK 44


>sp|ETFL_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 4 VLQACEK 10
VLQAC K
Sbjct: 38 VLQACRK 44


>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 4 VLQACEK 10
VLQAC K
Sbjct: 38 VLQACRK 44


>sp|EFTL_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 4 VLQACEK 10
VLQAC K
Sbjct: 38 VLQACRK 44


>sp|L_GOGV|RNA-DIRECTED RNA polymerase L|Alethinophid 1 reptarenavirus (isolate

Query: 1 GTTVLQACE 9
GTT+ + CE
Sbjct: 1518 GTTINETCE 1526


>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 TTVLQACEK 10
TT+ QAC K
Sbjct: 195 TTITQACPK 203




11|Sequence|51|60|QACEKVGMQI

>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 QACEKVGMQI 10
+AC K G++I
Sbjct: 2751 KACSKTGLKI 2760


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 QACEKVGMQI 10
+AC K G++I
Sbjct: 2805 KACSKTGLKI 2814


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 1 QACEKVGMQI 10
+AC K G++I
Sbjct: 2751 KACSKTGLKI 2760


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 QACEKVGMQI 10
+AC K G++I
Sbjct: 2805 KACSKTGLKI 2814


>sp|Y04A_BPT4|UNCHARACTERIZED 9.8 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 CEKVGMQI 10
C K+G+QI
Sbjct: 79 CFKIGLQI 86


>sp|RDRP_SHMV|REPLICASE large subunit|Sunn-hemp mosaic virus (SHMV) (TMV

Query: 3 CEKVGMQI 10
CEK+G+ I
Sbjct: 591 CEKLGVDI 598




12|Sequence|56|65|VGMQIPRFCY

>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)

Query: 2 GMQIPRFCY 10
G Q+P FCY
Sbjct: 891 GDQVPGFCY 899


>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)

Query: 3 MQIPRFCY 10
M++PR C+
Sbjct: 380 MRVPRLCF 387


>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 MQIPRFCY 10
M++PR C+
Sbjct: 380 MRVPRLCF 387


>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)

Query: 2 GMQIPRFCY 10
G Q+P FC+
Sbjct: 891 GDQVPGFCF 899


>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United

Query: 2 GMQIPRFCY 10
G +PR CY
Sbjct: 613 GTSVPRSCY 621


>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)

Query: 2 GMQIPRFCY 10
G +PR CY
Sbjct: 613 GTSVPRSCY 621


>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)

Query: 2 GMQIPRFCY 10
G +PR CY
Sbjct: 613 GTSVPRSCY 621


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 2 GMQIPRFCY 10
G +PR CY
Sbjct: 613 GTSVPRSCY 621


>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)

Query: 2 GMQIPRFCY 10
G +PR CY
Sbjct: 612 GTAVPRSCY 620


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 VGMQIPRFC 9
VG++ P FC
Sbjct: 2384 VGVKAPYFC 2392


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 VGMQIPRFC 9
VG++ P FC
Sbjct: 2364 VGVKAPYFC 2372


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 VGMQIPRFC 9
VG++ P FC
Sbjct: 2361 VGVKAPYFC 2369




13|Sequence|61|70|PRFCYHERLS

>sp|CAPSD_MNV1|CAPSID protein VP1|Norovirus (isolate Mouse/NoV/United

Query: 1 PRFCYHER 8
PR C H R
Sbjct: 237 PRLCTHAR 244


>sp|POLG_PRSVH|GENOME polyprotein|Papaya ringspot virus (strain P

Query: 1 PRFCYHE 7
P++C HE
Sbjct: 1209 PKYCVHE 1215


>sp|VP6_ROTBS|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate

Query: 2 RFCYHERL 9
RF YH RL
Sbjct: 207 RFIYHGRL 214


>sp|KITH_GAHVM|THYMIDINE kinase|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 PRFCYHERLS 10
P +HERLS
Sbjct: 101 PYLVFHERLS 110


>sp|KITH_GAHVR|THYMIDINE kinase|Gallid herpesvirus 2 (strain RB-1b)

Query: 1 PRFCYHERLS 10
P +HERLS
Sbjct: 101 PYLVFHERLS 110


>sp|SPIKE_FIPV|SPIKE glycoprotein|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 PRFCY 5
PR+CY
Sbjct: 400 PRYCY 404


>sp|SPIKE_CVPRT|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 PRFCY 5
PR+CY
Sbjct: 395 PRYCY 399


>sp|SPIKE_CVPRM|SPIKE glycoprotein|Porcine respiratory coronavirus (strain RM4)

Query: 1 PRFCY 5
PR+CY
Sbjct: 173 PRYCY 177


>sp|SPIKE_CVPR8|SPIKE glycoprotein|Porcine respiratory coronavirus (strain 86/137004

Query: 1 PRFCY 5
PR+CY
Sbjct: 173 PRYCY 177


>sp|SPIKE_CVPPU|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 PRFCY 5
PR+CY
Sbjct: 395 PRYCY 399


>sp|SPIKE_CVPMI|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 PRFCY 5
PR+CY
Sbjct: 397 PRYCY 401


>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 PRFCY 5
PR+CY
Sbjct: 397 PRYCY 401


>sp|SPIKE_CVCBG|SPIKE glycoprotein|Canine coronavirus (strain BGF10) (CCoV)

Query: 1 PRFCY 5
PR+CY
Sbjct: 401 PRYCY 405


>sp|SPIKE_CVCAI|SPIKE glycoprotein|Canine coronavirus (strain Insavc-1) (CCoV)

Query: 1 PRFCY 5
PR+CY
Sbjct: 401 PRYCY 405


>sp|YL172_MIMIV|UNCHARACTERIZED protein L172|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 FCYHERL 9
FC+HE +
Sbjct: 6 FCFHESI 12


>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)

Query: 3 FCYHERL 9
F YHERL
Sbjct: 773 FKYHERL 779


>sp|DUT_VARV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus

Query: 1 PRFCY 5
P+FCY
Sbjct: 59 PKFCY 63


>sp|DUT_VAR67|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus (isolate

Query: 1 PRFCY 5
P+FCY
Sbjct: 59 PKFCY 63


>sp|DUT_VACCW|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain

Query: 1 PRFCY 5
P+FCY
Sbjct: 59 PKFCY 63


>sp|DUT_RABPU|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Rabbitpox virus (strain

Query: 1 PRFCY 5
P+FCY
Sbjct: 59 PKFCY 63


>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)

Query: 1 PRFCY 5
P+FCY
Sbjct: 63 PKFCY 67


>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /

Query: 1 PRFCY 5
P+FCY
Sbjct: 59 PKFCY 63


>sp|DUT_CAMPS|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Camelpox virus (strain CMS)

Query: 1 PRFCY 5
P+FCY
Sbjct: 59 PKFCY 63


>sp|DUT_CAMPM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Camelpox virus (strain M-96)

Query: 1 PRFCY 5
P+FCY
Sbjct: 59 PKFCY 63


>sp|L_TACVF|RNA-DIRECTED RNA polymerase L|Tacaribe virus (strain Franze-Fernandez) (TCRV)

Query: 3 FCYHERLS 10
C+HE LS
Sbjct: 1354 LCFHEYLS 1361


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 FCYHERL 9
+C HER+
Sbjct: 86 YCVHERI 92


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 FCYHERL 9
+C HER+
Sbjct: 86 YCVHERI 92


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 4 CYHERLS 10
C+HE LS
Sbjct: 1358 CFHEYLS 1364


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 4 CYHERLS 10
C+HE LS
Sbjct: 1354 CFHEYLS 1360


>sp|ENV_FLVC6|ENVELOPE glycoprotein|Feline leukemia virus (isolate CFE-6)

Query: 1 PRFCYHE 7
PR YHE
Sbjct: 443 PRITYHE 449


>sp|KITH_MEHVF|THYMIDINE kinase|Meleagrid herpesvirus 1 (strain FC126)

Query: 1 PRFCYHERLS 10
P +HERLS
Sbjct: 92 PYLLFHERLS 101


>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 FCYHERL 9
+C HER+
Sbjct: 86 YCVHERI 92


>sp|KITH_MEHV1|THYMIDINE kinase|Meleagrid herpesvirus 1 (MeHV-1) (Turkey

Query: 1 PRFCYHERLS 10
P +HERLS
Sbjct: 92 PYLLFHERLS 101


>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 FCYHERL 9
+C HER+
Sbjct: 86 YCVHERI 92


>sp|REP_TPCTV|REPLICATION-ASSOCIATED protein|Tomato pseudo-curly top virus (TPCTV)

Query: 3 FCYHERLS 10
FCYH +S
Sbjct: 161 FCYHNLVS 168


>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12

Query: 1 PRFCYHERL 9
P F +H+RL
Sbjct: 455 PEFKWHQRL 463




14|Sequence|66|75|HERLSVAGNC

>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 ERLSVAGNC 10
ERL V G C
Sbjct: 343 ERLEVPGRC 351


>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 ERLSVAGNC 10
ERL V G C
Sbjct: 343 ERLEVPGRC 351


>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)

Query: 1 HERLSVAGNC 10
H R+ +GNC
Sbjct: 169 HSRVFPSGNC 178


>sp|FIB35_BPT4|LONG-TAIL fiber protein gp35|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 RLSVAGNC 10
++S+AG+C
Sbjct: 27 KISIAGSC 34


>sp|DCK2_FOWPN|PROBABLE deoxycytidine kinase FPV151|Fowlpox virus (strain NVSL) (FPV)

Query: 1 HERLSVAGN 9
H+++S+ GN
Sbjct: 23 HKKISIEGN 31


>sp|DNBI_EHV2|MAJOR DNA-binding protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 ERLSVAGNC 10
ERLS AG C
Sbjct: 544 ERLSEAGIC 552


>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 1 HERLSVAGNC 10
H R+ GNC
Sbjct: 169 HSRVFPGGNC 178


>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins

Query: 1 HERLSVAGNC 10
H R+ GNC
Sbjct: 169 HSRVFPGGNC 178




15|Sequence|71|80|VAGNCRMCLV

>sp|TEC_BPP1|PROTEIN tec|Escherichia phage P1 (Bacteriophage P1)

Query: 3 GNCRMCLV 10
G CR CL+
Sbjct: 21 GGCRECLI 28


>sp|YL498_MIMIV|PROBABLE zinc-type alcohol dehydrogenase-like protein|Acanthamoeba polyphaga

Query: 3 GNCRMC 8
G+C+MC
Sbjct: 161 GHCKMC 166


>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate

Query: 4 NCRMCL 9
NC MCL
Sbjct: 943 NCDMCL 948


>sp|POL_SFVCP|PRO-POL polyprotein|Simian foamy virus (isolate chimpanzee)

Query: 3 GNCRMCLV 10
G C+ CL+
Sbjct: 845 GRCKQCLI 852


>sp|POL_WDSV|GAG-POL polyprotein|Walleye dermal sarcoma virus (WDSV)

Query: 1 VAGNCRMCL 9
+ G+C++CL
Sbjct: 1458 ILGHCQICL 1466


>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1

Query: 4 NCRMC 8
NC+MC
Sbjct: 139 NCKMC 143


>sp|IE61_CHV9D|E3 ubiquitin-protein ligase IE61|Cercopithecine herpesvirus 9

Query: 3 GNCRMCL 9
GNC +C+
Sbjct: 17 GNCAICM 23


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 3 GNCRMCL 9
G C MC+
Sbjct: 2888 GKCEMCI 2894


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 3 GNCRMCLV 10
G C+ CL+
Sbjct: 845 GRCQQCLI 852


>sp|HBSAG_WHV5|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 4 NCRMCLV 10
NCR C +
Sbjct: 325 NCRQCTI 331


>sp|HBSAG_WHV4|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 4 NCRMCLV 10
NCR C +
Sbjct: 325 NCRQCTI 331


>sp|HBSAG_WHV2|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 4 NCRMCLV 10
NCR C +
Sbjct: 325 NCRQCTI 331


>sp|HBSAG_WHV1|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 4 NCRMCLV 10
NCR C +
Sbjct: 320 NCRQCTI 326


>sp|HBSAG_GSHV|LARGE envelope protein|Ground squirrel hepatitis virus (strain

Query: 4 NCRMCLV 10
NCR C +
Sbjct: 322 NCRQCTI 328


>sp|YR744_MIMIV|UNCHARACTERIZED protein R744|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VAGNCRMCLV 10
VA C++CLV
Sbjct: 122 VAVLCKICLV 131


>sp|YR277_MIMIV|UNCHARACTERIZED protein R277|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VAGNCRMCL 9
+ G C++C+
Sbjct: 49 LTGKCKLCI 57




16|Sequence|76|85|RMCLVEIEKA

>sp|YL107_MIMIV|PUTATIVE BTB/POZ domain-containing protein L107|Acanthamoeba polyphaga

Query: 1 RMCLVEIEK 9
++C+++IEK
Sbjct: 362 QLCVIDIEK 370




17|Sequence|81|90|EIEKAPKVVA

>sp|YL454_MIMIV|UNCHARACTERIZED protein L454|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 EIEKAPKVV 9
+I+KAPKV+
Sbjct: 324 DIKKAPKVI 332


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 1 EIEKAPKVVA 10
EI++ PKV+A
Sbjct: 1426 EIQRTPKVLA 1435


>sp|Y098_NPVOP|UNCHARACTERIZED 36.0 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 EIEKAPKVV 9
E+ K+PKVV
Sbjct: 237 ELPKSPKVV 245




18|Sequence|86|95|PKVVAACAMP

>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate

Query: 1 PKVVAACAMP 10
PKVV + A+P
Sbjct: 1054 PKVVESAAVP 1063




19|Sequence|91|100|ACAMPVMKGW

>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 1 ACAMPVMKGW 10
CAMP++ W
Sbjct: 395 GCAMPIVANW 404


>sp|Y16F_BPT4|UNCHARACTERIZED 12.8 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 CAMPVMKGW 10
CA P +GW
Sbjct: 14 CAEPTQEGW 22


>sp|RIR1_EHV2|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Equine herpesvirus 2 (strain 86/87)

Query: 1 ACAMPVMK 8
+CA PVM+
Sbjct: 189 SCATPVMR 196


>sp|YO17_ADEG1|UNCHARACTERIZED protein ORF17|Fowl adenovirus A serotype 1

Query: 3 AMPVMKGW 10
A+P+M GW
Sbjct: 131 ALPLMLGW 138




20|Sequence|96|105|VMKGWNILTN

>sp|POL_RSVSB|GAG-POL polyprotein|Rous sarcoma virus subgroup B

Query: 3 KGWNIL 8
KGWN+L
Sbjct: 1515 KGWNVL 1520


>sp|POL_ALV|GAG-POL polyprotein|Avian leukosis virus (ALV)

Query: 3 KGWNIL 8
KGWN+L
Sbjct: 1515 KGWNVL 1520


>sp|POL_RSVP|GAG-POL polyprotein|Rous sarcoma virus subgroup C

Query: 3 KGWNIL 8
KGWN+L
Sbjct: 1515 KGWNVL 1520


>sp|POL_ALVA|GAG-POL polyprotein|Avian leukosis virus subgroup A

Query: 3 KGWNIL 8
KGWN+L
Sbjct: 1515 KGWNVL 1520


>sp|MATRX_CHAV|MATRIX protein|Chandipura virus (strain I653514) (CHPV)

Query: 5 WNILTN 10
WNILTN
Sbjct: 165 WNILTN 170


>sp|L_MMVR|RNA-DIRECTED RNA polymerase L|Maize mosaic virus (isolate Maize/United

Query: 3 KGWNILT 9
KGW ILT
Sbjct: 682 KGWTILT 688


>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)

Query: 3 KGWNILT 9
KGW ILT
Sbjct: 683 KGWTILT 689


>sp|MATRX_ISFV|MATRIX protein|Isfahan virus (ISFV)

Query: 5 WNILTN 10
WN+LTN
Sbjct: 162 WNLLTN 167


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2626 GWNIIT 2631


>sp|YL112_MIMIV|PUTATIVE ankyrin repeat protein L112|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VMKGWNILTN 10
+MKG NI+ N
Sbjct: 391 IMKGVNIIVN 400


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2626 GWNIIT 2631


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2626 GWNIIT 2631


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2626 GWNIIT 2631


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2626 GWNIIT 2631


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2626 GWNIIT 2631


>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 1 VMKGWN 6
+M GWN
Sbjct: 2171 IMNGWN 2176


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2644 GWNIVT 2649


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2627 GWNIVT 2632


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2627 GWNIVT 2632


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 1 VMKGWN 6
+M GWN
Sbjct: 2171 IMNGWN 2176


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2627 GWNIVT 2632


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2649 GWNIVT 2654


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2648 GWNIVT 2653


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2648 GWNIVT 2653


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2639 GWNIVT 2644


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 4 GWNILT 9
GWNI+T
Sbjct: 2645 GWNIVT 2650


>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate

Query: 3 KGWNILT 9
KGW I T
Sbjct: 651 KGWTIFT 657


>sp|DPOL_CBEPV|DNA polymerase|Choristoneura biennis entomopoxvirus (CbEPV)

Query: 1 VMKGWNILTN 10
++K +NI+TN
Sbjct: 50 ILKDFNIITN 59


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 3 KGWNIL 8
KGW+IL
Sbjct: 676 KGWSIL 681


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3 KGWNIL 8
KGW+IL
Sbjct: 686 KGWSIL 691


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3 KGWNIL 8
KGW+IL
Sbjct: 686 KGWSIL 691


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 3 KGWNIL 8
KGW+IL
Sbjct: 675 KGWSIL 680


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3 KGWNIL 8
KGW+IL
Sbjct: 686 KGWSIL 691




21|Sequence|101|110|NILTNSEKSK

>sp|CAPSD_BPFO1|MAJOR capsid protein|Salmonella phage Felix O1 (isolate

Query: 2 ILTNSEKSK 10
+LTNSEKS+
Sbjct: 1 MLTNSEKSR 9




22|Sequence|106|115|SEKSKKAREG

>sp|POLG_ASGVK|GENOME polyprotein|Apple stem grooving virus (strain

Query: 1 SEKSKKAREG 10
+E+ KKAREG
Sbjct: 1968 TEEQKKAREG 1977




23|Sequence|111|120|KAREGVMEFL

>sp|YL027_MIMIV|UNCHARACTERIZED protein L27|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KAREGVMEFL 10
K EG+ EFL
Sbjct: 10 KTAEGIYEFL 19




24|Sequence|116|125|VMEFLLANHP

>sp|VF358_IIV3|UNCHARACTERIZED protein 083L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 VMEFLLANHP 10
++EF+L HP
Sbjct: 16 LVEFILEKHP 25


>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain

Query: 1 VMEFLLANHP 10
+MEF AN+P
Sbjct: 321 LMEFAPANYP 330


>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain

Query: 1 VMEFLLANHP 10
+MEF AN+P
Sbjct: 321 LMEFAPANYP 330


>sp|GLYCO_RYSV|GLYCOPROTEIN yellow stunt virus (RYSV)

Query: 1 VMEFLLANHP 10
+ME +L+N+P
Sbjct: 393 LMEVILSNYP 402


>sp|NCAP_QRFVE|NUCLEOPROTEIN virus (isolate QrfV/Tick/Afghanistan/EG_T_377/1968) (QRFV)

Query: 1 VMEFLLANHP 10
+ +F+LAN P
Sbjct: 258 IAKFMLANKP 267


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 EFLLANHP 10
EF+ NHP
Sbjct: 661 EFVWGNHP 668


>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 EFLLANHP 10
EF+ NHP
Sbjct: 660 EFVWGNHP 667


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 EFLLANHP 10
EF+ NHP
Sbjct: 661 EFVWGNHP 668


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 EFLLANHP 10
EF+ NHP
Sbjct: 660 EFVWGNHP 667


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 VMEFLLANHP 10
+MEFLL P
Sbjct: 1148 LMEFLLRRRP 1157


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 EFLLANHP 10
EF+ NHP
Sbjct: 661 EFVWGNHP 668


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 EFLLANHP 10
EF+ NHP
Sbjct: 661 EFVWGNHP 668


>sp|DPOL_BPSP1|DNA polymerase|Bacillus phage SP01 (Bacteriophage SP01)

Query: 1 VMEFLLANH 9
+MEF ANH
Sbjct: 550 LMEFRKANH 558


>sp|V018_FOWPN|PUTATIVE ankyrin repeat protein FPV018|Fowlpox virus (strain NVSL) (FPV)

Query: 2 MEFLLAN 8
ME+LLAN
Sbjct: 478 MEYLLAN 484


>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 EFLLANHP 10
EF+ NHP
Sbjct: 32 EFINVNHP 39


>sp|UL128_HCMVM|ENVELOPE protein UL128|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 EFLLANHP 10
EF+ NHP
Sbjct: 32 EFINVNHP 39


>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)

Query: 1 VMEFLLANHP 10
+M+F AN+P
Sbjct: 321 LMDFAAANYP 330


>sp|L_SV41|RNA-DIRECTED RNA polymerase L|Simian virus 41 (SV41)

Query: 1 VMEFLLANH 9
+ E LLANH
Sbjct: 577 IAEALLANH 585


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 1 VMEFLLANH 9
+ E LLANH
Sbjct: 577 IAESLLANH 585


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1 VMEFLLANH 9
+ E LLANH
Sbjct: 575 IAESLLANH 583


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1 VMEFLLANH 9
+ E LLANH
Sbjct: 575 IAESLLANH 583


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 1 VMEFLLANH 9
+ E LLANH
Sbjct: 577 IAESLLANH 585


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 1 VMEFLLANH 9
+ E LLANH
Sbjct: 577 IAESLLANH 585




25|Sequence|121|130|LANHPLDCPI

>sp|YR367_MIMIV|UNCHARACTERIZED protein R367|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 PLDCPI 10
P+DCP+
Sbjct: 436 PIDCPV 441


>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)

Query: 3 NHPLDC 8
NHP DC
Sbjct: 2277 NHPHDC 2282


>sp|RDRP_RBDVR|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Raspberry bushy dwarf virus (isolate

Query: 1 LANHPLDCPI 10
L+N P D PI
Sbjct: 218 LSNFPADAPI 227


>sp|L_LATVB|RNA-DIRECTED RNA polymerase L|Latino mammarenavirus (isolate Rat/Bolivia/MARU

Query: 2 ANHPLDC 8
+ HP+DC
Sbjct: 278 SEHPVDC 284


>sp|GP_TSWVR|ENVELOPMENT polyprotein|Tomato spotted wilt virus (strain

Query: 4 HPLDCPI 10
H L+CPI
Sbjct: 403 HSLECPI 409


>sp|YR818_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R818|Acanthamoeba polyphaga

Query: 5 PLDCPI 10
P DCPI
Sbjct: 1609 PSDCPI 1614


>sp|GLYCO_HIRRV|GLYCOPROTEIN rhabdovirus (strain Korea/CA 9703/1997)

Query: 1 LANHPLDCP 9
L +P+DCP
Sbjct: 40 LFTYPVDCP 48


>sp|PG050_VARV|PROTEIN OPG050|Variola virus

Query: 2 ANHPLDC 8
ANH DC
Sbjct: 43 ANHGFDC 49


>sp|PG050_VAR67|PROTEIN OPG050|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 ANHPLDC 8
ANH DC
Sbjct: 43 ANHGFDC 49


>sp|PG050_VACCW|PROTEIN OPG050|Vaccinia virus (strain Western Reserve)

Query: 2 ANHPLDC 8
ANH DC
Sbjct: 43 ANHGFDC 49


>sp|PG050_VACCP|PROTEIN OPG050|Vaccinia virus (strain L-IVP) (VACV)

Query: 2 ANHPLDC 8
ANH DC
Sbjct: 43 ANHGFDC 49


>sp|PG050_VACCC|PROTEIN OPG050|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 ANHPLDC 8
ANH DC
Sbjct: 43 ANHGFDC 49


>sp|PG050_VACCA|PROTEIN OPG050|Vaccinia virus (strain Ankara) (VACV)

Query: 2 ANHPLDC 8
ANH DC
Sbjct: 43 ANHGFDC 49


>sp|POL_WDSV|GAG-POL polyprotein|Walleye dermal sarcoma virus (WDSV)

Query: 2 ANHPLDCP 9
A P+DCP
Sbjct: 582 AXDPIDCP 589


>sp|SPIKE_BRV1|SPIKE glycoprotein|Breda virus 1 (BRV-1)

Query: 4 HPLDCPI 10
HP CP+
Sbjct: 819 HPSGCPV 825


>sp|SPIKE_BEV|SPIKE glycoprotein|Berne virus (BEV)

Query: 4 HPLDCPI 10
HP CP+
Sbjct: 820 HPSGCPV 826


>sp|UNG_MIMIV|PROBABLE uracil-DNA glycosylase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 PLDCPI 10
PL+CP+
Sbjct: 212 PLNCPV 217


>sp|RDRP_SHVX|RNA replication protein|Shallot virus X (ShVX)

Query: 4 HPLDCPI 10
HP CP+
Sbjct: 131 HPNSCPV 137




26|Sequence|126|135|LDCPICDQGG

>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 1 LDCPICDQG 9
L+C IC+QG
Sbjct: 1234 LECQICEQG 1242


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 LDCPICDQG 9
++C +CDQG
Sbjct: 1234 MECQLCDQG 1242


>sp|TEV3_BPR03|INTRON-ASSOCIATED endonuclease 3|Enterobacteria phage RB3 (Bacteriophage RB3)

Query: 1 LDCPICDQ 8
L+CP CD+
Sbjct: 240 LNCPYCDK 247


>sp|ICP0_SUHVF|E3 ubiquitin-protein ligase ICP0|Suid herpesvirus 1 (strain

Query: 1 LDCPIC 6
+DCPIC
Sbjct: 44 MDCPIC 49


>sp|NP1_HBOC4|NON-STRUCTURAL protein NP-1|Human bocavirus 4 (HBoV4) (Human

Query: 2 DCPICD 7
DCP CD
Sbjct: 170 DCPRCD 175


>sp|NP1_HBOC2|NON-STRUCTURAL protein NP-1|Human bocavirus 2 (HBoV2) (Human

Query: 2 DCPICD 7
DCP CD
Sbjct: 170 DCPRCD 175


>sp|YR311_MIMIV|PUTATIVE RING finger protein R311|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 DCPIC 6
DCP+C
Sbjct: 501 DCPVC 505


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 2 DCPICD 7
DCP CD
Sbjct: 729 DCPRCD 734


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 DCPICD 7
DCP CD
Sbjct: 729 DCPRCD 734


>sp|YR104_MIMIV|PUTATIVE transposase R104|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 DCPICDQ 8
DCP C Q
Sbjct: 514 DCPKCKQ 520


>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P

Query: 3 CPICD 7
CP+CD
Sbjct: 634 CPLCD 638


>sp|VF466_IIV6|UNCHARACTERIZED protein 466R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 DCPIC 6
DCP+C
Sbjct: 56 DCPVC 60


>sp|ENV_JSRV|ENVELOPE glycoprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 LDCPICDQ 8
LD P CD+
Sbjct: 183 LDIPFCDK 190


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 1 LDCPICDQ 8
L C +CDQ
Sbjct: 5441 LPCHVCDQ 5448


>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39

Query: 3 CPICDQGG 10
C CD+GG
Sbjct: 427 CSKCDEGG 434


>sp|Y70_SIRV1|UNCHARACTERIZED zinc finger protein 70|Sulfolobus islandicus rod-shaped virus 1

Query: 2 DCPICDQ 8
+CPIC +
Sbjct: 22 ECPICGE 28


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 2 DCPICDQG 9
+CP+ D+G
Sbjct: 174 ECPMLDEG 181


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 2 DCPICDQG 9
+CP+ D+G
Sbjct: 174 ECPMLDEG 181


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 2 DCPICDQG 9
+CP+ D+G
Sbjct: 174 ECPMLDEG 181


>sp|YL048_MIMIV|UNCHARACTERIZED protein L48|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 CPICDQG 9
CP+C G
Sbjct: 6 CPVCQSG 12


>sp|RDRP_CMVK|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain K)

Query: 2 DCPICDQGG 10
D P C+ GG
Sbjct: 846 DVPPCEHGG 854


>sp|TEV3_BPT4|DEFECTIVE intron-associated endonuclease 3|Enterobacteria phage T4

Query: 1 LDCPICDQ 8
L+CP CD+
Sbjct: 68 LNCPYCDK 75


>sp|RDRP_CMVAS|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain As)

Query: 2 DCPICDQGG 10
D P C+ GG
Sbjct: 846 DVPPCEHGG 854


>sp|L_TACVF|RNA-DIRECTED RNA polymerase L|Tacaribe virus (strain Franze-Fernandez) (TCRV)

Query: 2 DCPIC 6
DCP C
Sbjct: 283 DCPFC 287


>sp|V14_SPTNK|UNCHARACTERIZED protein V14|Sputnik virophage

Query: 2 DCPIC 6
+CPIC
Sbjct: 27 ECPIC 31


>sp|1A_PSVJ|REPLICATION protein 1a|Peanut stunt virus (strain J)

Query: 2 DCPICDQGG 10
DC IC+ G
Sbjct: 694 DCVICNSDG 702


>sp|YR097_MIMIV|UNCHARACTERIZED protein R97|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 CPICD 7
CP+CD
Sbjct: 133 CPVCD 137


>sp|YR811_MIMIV|PUTATIVE ariadne-like RING finger protein|Acanthamoeba polyphaga mimivirus

Query: 1 LDCPICDQ 8
L CP C Q
Sbjct: 849 LTCPFCKQ 856


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 LDCPICDQG 9
L CP+ D G
Sbjct: 1134 LRCPLTDMG 1142


>sp|CATV_NPVST|VIRAL cathepsin|Spodoptera litura multicapsid nucleopolyhedrovirus

Query: 1 LDCPICDQG 9
LDC DQG
Sbjct: 179 LDCDRVDQG 187


>sp|IE0_NPVLD|IMMEDIATE-EARLY protein IE-0|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 3 CPICDQG 9
CPIC G
Sbjct: 233 CPICKTG 239


>sp|VQ3L_SHEVK|G-PROTEIN coupled receptor homolog Q2/3L|Sheeppox virus (strain KS-1)

Query: 1 LDCPICDQG 9
+D P CD G
Sbjct: 78 VDIPHCDDG 86


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 2 DCPICDQG 9
DC C QG
Sbjct: 1184 DCDFCMQG 1191


>sp|ENDO2_BPT5|PUTATIVE endonuclease|Escherichia phage T5 (Enterobacteria phage

Query: 3 CPICDQGG 10
CP C GG
Sbjct: 133 CPDCASGG 140


>sp|VG11_ICHVA|PUTATIVE zinc-binding protein ORF11|Ictalurid herpesvirus 1 (strain

Query: 2 DCPICDQGG 10
+CP C GG
Sbjct: 53 ECPECGSGG 61


>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52

Query: 1 LDCPICDQG 9
L C CD+G
Sbjct: 260 LQCLTCDRG 268


>sp|GLYC_RSVT|PUTATIVE envelope glycoprotein|Rice stripe virus (isolate T)

Query: 5 ICDQGG 10
+CD+GG
Sbjct: 224 VCDKGG 229


>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)

Query: 1 LDCPICDQ 8
L CP+C +
Sbjct: 319 LSCPVCKR 326




27|Sequence|131|140|CDQGGECDLQ

>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 CDQGGECDLQ 10
CD G CD++
Sbjct: 2 CDASGACDMR 11


>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 CDQGGECDLQ 10
CD G CD++
Sbjct: 2 CDASGACDMR 11


>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)

Query: 4 GGECD 8
GGECD
Sbjct: 171 GGECD 175


>sp|ENV_QRFVE|ENVELOPE glycoprotein|Quaranfil virus (isolate

Query: 1 CDQGGEC 7
C++GG+C
Sbjct: 111 CNKGGDC 117


>sp|BXD_CBDP|BOTULINUM neurotoxin type D|Clostridium botulinum D phage (Clostridium

Query: 3 QGGEC 7
QGGEC
Sbjct: 1179 QGGEC 1183


>sp|077R_IIV3|UNCHARACTERIZED protein 077R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 CDQGGECDLQ 10
CD +C LQ
Sbjct: 58 CDDPNQCTLQ 67


>sp|TMP_BPT1|TAPE measure protein|Escherichia phage T1 (Bacteriophage T1)

Query: 1 CDQGGE 6
C QGGE
Sbjct: 941 CSQGGE 946


>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)

Query: 2 DQGGEC 7
D GGEC
Sbjct: 118 DHGGEC 123


>sp|VP2_BTV1A|OUTER capsid protein VP2|Bluetongue virus 1 (isolate Australia)

Query: 2 DQGGECDL 9
+QG CDL
Sbjct: 441 EQGNPCDL 448


>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus

Query: 2 DQGGEC 7
D GGEC
Sbjct: 118 DHGGEC 123


>sp|CPRT_SBWMN|84 kDa readthrough protein|Soil-borne wheat mosaic virus (strain

Query: 1 CDQGGECDLQ 10
CD GGE Q
Sbjct: 81 CDLGGEAVTQ 90


>sp|CAPSD_SBWMN|CAPSID protein|Soil-borne wheat mosaic virus (strain

Query: 1 CDQGGECDLQ 10
CD GGE Q
Sbjct: 81 CDLGGEAVTQ 90


>sp|M21_HMPVC|PROTEIN M2-1|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 1 CDQGGEC 7
C++G EC
Sbjct: 15 CNRGSEC 21


>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2 DQGGEC 7
D GGEC
Sbjct: 118 DHGGEC 123


>sp|M21_AMPV1|PROTEIN M2-1|Avian metapneumovirus (isolate Canada

Query: 1 CDQGGEC 7
C++G EC
Sbjct: 15 CNRGSEC 21




28|Sequence|136|145|ECDLQDQSMM

***** No hits found ******


29|Sequence|141|150|DQSMMFGNDR

>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 3 SMMFGNDR 10
+MMFG+DR
Sbjct: 1234 AMMFGSDR 1241


>sp|RIR2_EHV4|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Equine herpesvirus 4 (strain 1942)

Query: 2 QSMMFGND 9
Q M+FGND
Sbjct: 118 QLMLFGND 125


>sp|RIR2_EHV1B|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Equine herpesvirus 1 (strain Ab4p)

Query: 2 QSMMFGND 9
Q M+FGND
Sbjct: 119 QLMLFGND 126


>sp|YL487_MIMIV|UNCHARACTERIZED protein L487|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DQSMMFGND 9
D +MFGND
Sbjct: 244 DSELMFGND 252




30|Sequence|146|155|FGNDRSRFLE

>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 FGNDRSRFLE 10
FGN R +FLE
Sbjct: 1954 FGNIREKFLE 1963


>sp|POLG_ZYMVR|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 FGNDRSRFLE 10
FGN R +FLE
Sbjct: 1954 FGNIREKFLE 1963


>sp|V001_FOWPN|PUTATIVE C-type lectin protein FPV001/FPV260|Fowlpox virus (strain NVSL)

Query: 2 GNDRSRF 8
GND SRF
Sbjct: 136 GNDHSRF 142


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 2 GNDRSRFLE 10
G DR RFL+
Sbjct: 1957 GEDRMRFLK 1965


>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 FGNDRSRFLE 10
FG+ R +FLE
Sbjct: 1951 FGSIREKFLE 1960


>sp|VP4_BTV10|CORE protein VP4|Bluetongue virus 10 (isolate USA)

Query: 2 GNDRSRFLE 10
G DR RFL+
Sbjct: 375 GRDRGRFLK 383


>sp|VP4_BTV11|CORE protein VP4|Bluetongue virus 11 (isolate USA)

Query: 2 GNDRSRFLE 10
G DR RFL+
Sbjct: 375 GRDRGRFLK 383


>sp|1002L_ASFWA|PROTEIN MGF 100-2L|African swine fever virus (isolate

Query: 2 GNDRSRFLE 10
GN SR+LE
Sbjct: 2 GNKESRYLE 10


>sp|1002L_ASFP4|PROTEIN MGF 100-2L|African swine fever virus (isolate

Query: 2 GNDRSRFLE 10
GN SR+LE
Sbjct: 2 GNKESRYLE 10




31|Sequence|151|160|SRFLEGKRAV

>sp|VG88_BPMD2|GENE 88 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 SRFLEGK 7
+RFLEGK
Sbjct: 172 ARFLEGK 178


>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)

Query: 1 SRFLEGKRAV 10
+ + EGKRAV
Sbjct: 602 TNYTEGKRAV 611


>sp|VEAC_BPP22|EAC protein|Salmonella phage P22 (Bacteriophage P22)

Query: 3 FLEGKRAV 10
FL+GKR V
Sbjct: 83 FLDGKRVV 90




32|Sequence|156|165|GKRAVEDKNI

>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1 GKRAVEDKNI 10
G+RAV D+N+
Sbjct: 5 GERAVHDENL 14


>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas)

Query: 1 GKRAVEDKNI 10
G+RAV D+N+
Sbjct: 5 GERAVHDENL 14


>sp|36016_ASFM2|PROTEIN MGF 360-16R|African swine fever virus (isolate

Query: 3 RAVEDKNI 10
RAV+D+NI
Sbjct: 71 RAVKDRNI 78


>sp|YR349_MIMIV|UNCHARACTERIZED protein R349|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 RAVEDKNI 10
R V+DKNI
Sbjct: 671 RIVDDKNI 678




33|Sequence|161|170|EDKNIGPLVK

>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)

Query: 1 EDKNIGPLVK 10
+D++I P+VK
Sbjct: 725 DDRDINPIVK 734


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 EDKNIGPLVK 10
+D++I P+VK
Sbjct: 724 DDRDINPIVK 733


>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 1 EDKNIGPLVK 10
+D++I P+VK
Sbjct: 724 DDRDINPIVK 733


>sp|DPOL_VACCW|DNA polymerase|Vaccinia virus (strain Western Reserve)

Query: 1 EDKNIGPLVK 10
+D++I P+VK
Sbjct: 725 DDRDINPIVK 734


>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)

Query: 1 EDKNIGPLVK 10
+D++I P+VK
Sbjct: 725 DDRDINPIVK 734


>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 EDKNIGPLVK 10
+D++I P+VK
Sbjct: 725 DDRDINPIVK 734


>sp|VP16_GAHVM|TEGUMENT protein VP16 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 EDKNIGPLVK 10
EDKNIG K
Sbjct: 219 EDKNIGACSK 228


>sp|ENV_FSVSM|ENVELOPE glycoprotein|Feline sarcoma virus (strain SM)

Query: 2 DKNIGPLV 9
DKN PLV
Sbjct: 185 DKNCNPLV 192


>sp|DPOL_PBCV1|DNA polymerase|Paramecium bursaria Chlorella virus 1

Query: 1 EDKNIGPLV 9
EDK + PLV
Sbjct: 176 EDKTVPPLV 184


>sp|YR791_MIMIV|PUTATIVE ankyrin repeat protein R791|Acanthamoeba polyphaga mimivirus

Query: 1 EDKNIGPLV 9
E +N+GPLV
Sbjct: 62 ELENLGPLV 70




34|Sequence|166|175|GPLVKTIMTR

>sp|E6_FOWPN|PROTEIN E6 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 GPLVKTIMT 9
GP+V +IMT
Sbjct: 209 GPVVSSIMT 217


>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate

Query: 3 LVKTIMT 9
LVKTIMT
Sbjct: 1144 LVKTIMT 1150


>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain

Query: 3 LVKTIMT 9
LVKT+MT
Sbjct: 1144 LVKTVMT 1150




35|Sequence|171|180|TIMTRCIQCT

>sp|POL_AVIRE|GAG-POL polyprotein|Avian reticuloendotheliosis virus

Query: 2 IMTRCIQC 9
I TRC+ C
Sbjct: 837 ITTRCVAC 844


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 4 TRCIQC 9
TRCI C
Sbjct: 1287 TRCINC 1292


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 1 TIMTRCIQCT 10
TIM R ++CT
Sbjct: 1142 TIMWRGLECT 1151


>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 MTRCIQC 9
M RCI+C
Sbjct: 349 MARCIRC 355


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 MTRCIQC 9
M RCI+C
Sbjct: 350 MARCIRC 356


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 MTRCIQC 9
M RCI+C
Sbjct: 350 MARCIRC 356


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 MTRCIQC 9
M RCI+C
Sbjct: 350 MARCIRC 356


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 MTRCIQC 9
M RCI+C
Sbjct: 350 MARCIRC 356


>sp|RPB1_IIV6|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 6

Query: 5 RCIQCT 10
RC+ CT
Sbjct: 141 RCVHCT 146


>sp|POL_ALVA|GAG-POL polyprotein|Avian leukosis virus subgroup A

Query: 1 TIMTRCIQC 9
T+ T C QC
Sbjct: 149 TVGTSCYQC 157


>sp|GAG_ALVA|GAG polyprotein|Avian leukosis virus subgroup A

Query: 1 TIMTRCIQC 9
T+ T C QC
Sbjct: 149 TVGTSCYQC 157


>sp|GAG_AVEV1|GAG polyprotein|Avian endogenous virus EV-1

Query: 1 TIMTRCIQC 9
T+ T C QC
Sbjct: 149 TVGTSCYQC 157


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 MTRCIQC 9
M RC++C
Sbjct: 349 MARCVRC 355




36|Sequence|176|185|CIQCTRCIRF

>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2 IQCTRCIR 9
+QC RC+R
Sbjct: 1315 LQCNRCVR 1322


>sp|P19_PLV|RNA silencing suppressor p19|Pear latent virus (PeLV)

Query: 2 IQCTRCIRF 10
I CT CIRF
Sbjct: 108 IGCTYCIRF 116


>sp|VG55_ICHVA|UNCHARACTERIZED protein ORF55|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 IQCTRC 7
+QCTRC
Sbjct: 169 VQCTRC 174


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2 IQCTRCIR 9
++C RC+R
Sbjct: 1315 LRCNRCVR 1322


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 2 IQCTRCIR 9
++C RC+R
Sbjct: 1315 LRCNRCVR 1322


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 2 IQCTRCIR 9
++C RC+R
Sbjct: 1315 LRCNRCVR 1322


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2 IQCTRCIR 9
++C RC+R
Sbjct: 1315 LRCNRCVR 1322


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2 IQCTRCIR 9
++C RC+R
Sbjct: 1315 LRCNRCVR 1322


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2 IQCTRCIR 9
++C RC+R
Sbjct: 1315 LRCNRCVR 1322


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 2 IQCTRCIR 9
++C RC+R
Sbjct: 1315 LRCNRCVR 1322


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 1 CIQCTRCI 8
C+ CT+C+
Sbjct: 2257 CMPCTQCL 2264


>sp|L_BEFVB|RNA-DIRECTED RNA polymerase L|Bovine ephemeral fever virus (strain

Query: 2 IQCTRCIR 9
I+C +C+R
Sbjct: 1326 IKCNKCLR 1333


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 2 IQCTRCIR 9
++C +CIR
Sbjct: 1316 LRCNKCIR 1323


>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 2 IQCTRCI 8
I CT+CI
Sbjct: 451 ITCTKCI 457


>sp|YL678_MIMIV|PUTATIVE SET domain-containing protein L678|Acanthamoeba polyphaga mimivirus

Query: 3 QCTRCI 8
QC RCI
Sbjct: 198 QCERCI 203


>sp|GAG_MSVMO|GAG polyprotein|Moloney murine sarcoma virus (MoMSV)

Query: 1 CIQCTRC 7
C QCT C
Sbjct: 501 CDQCTYC 507


>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)

Query: 2 IQCTRCIR 9
++C +CIR
Sbjct: 1315 LRCQKCIR 1322


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 2 IQCTRCIR 9
++C +CIR
Sbjct: 1315 LRCQKCIR 1322


>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate

Query: 2 IQCTRCIR 9
+ CT C+R
Sbjct: 1302 VNCTSCLR 1309


>sp|VF151_ASFK5|PROTEIN A151R|African swine fever virus (isolate

Query: 2 IQCTRCIRF 10
I CT+C F
Sbjct: 129 IWCTKCTSF 137


>sp|MVP_PSBMV|P3N-PIPO polyprotein|Pea seed-borne mosaic virus (strain

Query: 2 IQCTRCI 8
I CT+CI
Sbjct: 451 ITCTKCI 457


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2 IQCTRCIR 9
++C +CIR
Sbjct: 1316 LRCPKCIR 1323


>sp|L_IHNVW|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 2 IQCTRCIR 9
++CT C R
Sbjct: 1295 VKCTSCFR 1302


>sp|L_IHNVO|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 2 IQCTRCIR 9
++CT C R
Sbjct: 1295 VKCTSCFR 1302


>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain

Query: 2 IQCTRCIR 9
++C +CIR
Sbjct: 1315 LRCLKCIR 1322


>sp|L_EBLV1|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 1 (strain

Query: 2 IQCTRCIR 9
++C +CIR
Sbjct: 1315 LRCLKCIR 1322


>sp|CVC1_PSHV1|CAPSID vertex component 1|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 CIQCTRCIR 9
C+QCT+ R
Sbjct: 63 CLQCTQWRR 71


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 IQCTRCI 8
+ CTRC+
Sbjct: 23 VYCTRCL 29


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 CIQCTRC 7
CI CT C
Sbjct: 1484 CILCTVC 1490


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 IQCTRCI 8
+ CTRC+
Sbjct: 23 VYCTRCL 29


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 IQCTRCI 8
+ CTRC+
Sbjct: 23 VYCTRCL 29


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 IQCTRCI 8
+ CTRC+
Sbjct: 23 VYCTRCL 29


>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 2 IQCTRCIR 9
++CT C R
Sbjct: 1295 VKCTACFR 1302


>sp|VF151_ASFWA|PROTEIN A151R|African swine fever virus (isolate

Query: 2 IQCTRCIRF 10
I CT+C F
Sbjct: 130 IWCTKCTSF 138


>sp|VF151_ASFP4|PROTEIN A151R|African swine fever virus (isolate

Query: 2 IQCTRCIRF 10
I CT+C F
Sbjct: 130 IWCTKCTSF 138


>sp|VF151_ASFM2|PROTEIN A151R|African swine fever virus (isolate

Query: 2 IQCTRCIRF 10
I CT+C F
Sbjct: 129 IWCTKCTTF 137


>sp|VF151_ASFB7|PROTEIN A151R|African swine fever virus (strain

Query: 2 IQCTRCIRF 10
I CT+C F
Sbjct: 130 IWCTKCTSF 138


>sp|UL49_SHV21|UNCHARACTERIZED gene 66 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 CIQCTRCIRF 10
CI+C C+ F
Sbjct: 305 CIECGHCLNF 314


>sp|NS2_MPV15|NON-STRUCTURAL protein 2|Murine pneumonia virus (strain 15)

Query: 2 IQCTRCIRF 10
I+CT CI +
Sbjct: 135 IECTGCIPY 143


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 2 IQCTRCI 8
+ CTRC+
Sbjct: 23 VYCTRCL 29


>sp|VE6_HPV31|PROTEIN E6|Human papillomavirus 31

Query: 4 CTRCIRF 10
CT+C+RF
Sbjct: 63 CTKCLRF 69


>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 CTRCIR 9
CTRC R
Sbjct: 29 CTRCFR 34


>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 CTRCIR 9
CTRC R
Sbjct: 29 CTRCFR 34




37|Sequence|181|190|RCIRFASEIA

>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain

Query: 2 CIRFASE 8
C+RFAS+
Sbjct: 57 CVRFASD 63


>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain

Query: 2 CIRFASE 8
C+RFAS+
Sbjct: 57 CVRFASD 63


>sp|Y012_OSHVF|UNCHARACTERIZED protein ORF12|Ostreid herpesvirus 1 (isolate France)

Query: 2 CIRFASE 8
CIR+AS+
Sbjct: 125 CIRYASQ 131




38|Sequence|186|195|ASEIAGVDDL

>sp|Y15K_PMV|UNCHARACTERIZED 14.7 kDa protein in|Papaya mosaic potexvirus (PMV)

Query: 1 ASEIAGVDD 9
AS+I+G+DD
Sbjct: 119 ASDISGIDD 127


>sp|NCAP_ISAV8|NUCLEOPROTEIN salmon anemia virus (isolate

Query: 3 EIAGVDD 9
E+AGVDD
Sbjct: 109 EMAGVDD 115




39|Sequence|191|200|GVDDLGTTGR

>sp|YR635_MIMIV|UNCHARACTERIZED protein R635|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 DDLGTTG 9
DD+GT+G
Sbjct: 309 DDIGTSG 315


>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)

Query: 2 VDDLGT 7
VDDLGT
Sbjct: 35 VDDLGT 40


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 1 GVDDLG 6
G+DDLG
Sbjct: 389 GIDDLG 394




40|Sequence|196|205|GTTGRGNDMQ

>sp|CAPSD_FCVF4|CAPSID protein VP1|Feline calicivirus (strain Japanese F4)

Query: 2 TTGRGNDMQ 10
TTG GND++
Sbjct: 438 TTGEGNDIK 446


>sp|Y015_HIS1I|UNCHARACTERIZED protein ORF15|His1 virus (isolate Australia/Victoria) (His1V)

Query: 1 GTTGRGNDMQ 10
GT G+GN+M+
Sbjct: 29 GTDGKGNNMK 38


>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus

Query: 1 GTTGRGNDMQ 10
G TGRG D +
Sbjct: 224 GATGRGGDAR 233


>sp|CAPSD_HV19S|MAJOR capsid protein|Helminthosporium victoriae virus-190S (Hv190SV)

Query: 1 GTTGRGND 8
G TGRGN+
Sbjct: 661 GVTGRGNN 668




41|Sequence|201|210|GNDMQVGTYI

>sp|VG69_BPML5|GENE 69 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 GNDMQVGTY 9
G+D Q+G Y
Sbjct: 200 GDDFQLGVY 208


>sp|VG69_BPMD2|GENE 69 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 GNDMQVGTY 9
G+D Q+G Y
Sbjct: 179 GDDFQLGVY 187


>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1 GNDMQVGT 8
GN+MQ+ T
Sbjct: 393 GNNMQIST 400


>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 1 GNDMQVGT 8
GN+MQ+ T
Sbjct: 393 GNNMQIST 400


>sp|VG11_SHV21|UNCHARACTERIZED gene 11 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 4 MQVGTYI 10
MQ+GTY+
Sbjct: 162 MQMGTYL 168




42|Sequence|206|215|VGTYIEKMFM

>sp|PCPP_BPT4|PROHEAD core protein protease|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 GTYIEKMFM 10
G YIE +FM
Sbjct: 37 GLYIEGIFM 45


>sp|RIR1_MIMIV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VGTYIEKMF 9
+ TY+EK+F
Sbjct: 86 IRTYVEKIF 94


>sp|POL1_BRAV|RNA1 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 1 VGTYIEKMFM 10
+GT I KM++
Sbjct: 1677 IGTMINKMYI 1686


>sp|DPOL_BPT5|DNA polymerase|Escherichia phage T5 (Enterobacteria phage

Query: 1 VGTYIEKMFM 10
+ TY+EK+ +
Sbjct: 462 ISTYVEKILL 471




43|Sequence|211|220|EKMFMSELSG

>sp|NCAP_PIRVV|NUCLEOPROTEIN mammarenavirus (isolate Rat/Venezuela/VAV-488/1995) (PIRV)

Query: 1 EKMFMSELSG 10
E+MF+SE G
Sbjct: 284 ERMFVSEAPG 293


>sp|NCAP_OLVVA|NUCLEOPROTEIN mammarenavirus (isolate Mouse/Argentina/RIID 3229/1990)

Query: 1 EKMFMSELSG 10
E+MF+SE G
Sbjct: 284 ERMFVSEKPG 293


>sp|VF019_IIV6|UNCHARACTERIZED protein 019R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 KMFMSELSG 10
KMF S+LSG
Sbjct: 154 KMFDSDLSG 162




44|Sequence|216|225|SELSGNIIDI

>sp|YR096_MIMIV|PUTATIVE ankyrin repeat protein R96|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 SELSGNIID 9
SEL GNI+D
Sbjct: 274 SELVGNIVD 282


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1 SELSGNIIDI 10
+E GN+IDI
Sbjct: 1603 TEYIGNVIDI 1612


>sp|L_CPXVB|RNA-DIRECTED RNA polymerase L|Cupixi mammarenavirus (isolate Rat/Brasil/BeAn

Query: 2 ELSGNII 8
ELSGN+I
Sbjct: 2097 ELSGNVI 2103


>sp|EXLYS_BPDPK|PEPTIDOGLYCAN hydrolase gp181|Pseudomonas phage phiKZ

Query: 3 LSGNIIDI 10
L+GN+IDI
Sbjct: 853 LNGNLIDI 860


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 2 ELSGNIIDI 10
E GN+IDI
Sbjct: 1604 EYIGNVIDI 1612




45|Sequence|221|230|NIIDICPVGA

>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 2 IIDICPVG 9
++D+CP+G
Sbjct: 1001 VLDVCPLG 1008


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 4 DICPVG 9
DICP+G
Sbjct: 1002 DICPLG 1007


>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1 NIIDICPVG 9
NI ++CP G
Sbjct: 331 NITNLCPFG 339


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1 NIIDICPVG 9
NI ++CP G
Sbjct: 318 NITNLCPFG 326


>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)

Query: 1 NIIDICPV 8
+IIDIC V
Sbjct: 979 SIIDICSV 986


>sp|VNS2_EHDV2|NON-STRUCTURAL protein NS2|Epizootic hemorrhagic disease virus 2

Query: 2 IIDICPVGA 10
+++IC VGA
Sbjct: 57 VLEICDVGA 65


>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 NIIDICPVG 9
N+I +CP G
Sbjct: 199 NLIGLCPAG 207


>sp|TRM1_MUHVS|TRIPARTITE terminase subunit 1|Murid herpesvirus 1 (strain Smith)

Query: 4 DICPVGA 10
DICPV
Sbjct: 175 DICPVAG 181


>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United

Query: 1 NIIDIC 6
N+IDIC
Sbjct: 176 NLIDIC 181


Query: 1 NIIDIC 6
NI+DIC
Sbjct: 374 NILDIC 379




46|Sequence|226|235|CPVGALTSKP

>sp|DPO11_BPK64|DEPOLYMERASE, capsule K11-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 2 PVGALTSKP 10
PVGA+ KP
Sbjct: 671 PVGAVKCKP 679


>sp|VG31_BPT4|CAPSID assembly protein Gp31|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 CPVGALTSKP 10
C VG LTS P
Sbjct: 63 CEVGDLTSLP 72


>sp|MATRX_LNYV3|MATRIX protein|Lettuce necrotic yellows virus (isolate

Query: 2 PVGALTSKP 10
P G LT KP
Sbjct: 159 PFGVLTKKP 167




47|Sequence|231|240|LTSKPYAFTA

>sp|Y417_SIRV1|UNCHARACTERIZED protein 417|Sulfolobus islandicus rod-shaped virus 1

Query: 1 LTSKPYAFT 9
L +KPY FT
Sbjct: 74 LNAKPYPFT 82


>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)

Query: 4 KPYAFT 9
KPY+FT
Sbjct: 421 KPYSFT 426


>sp|POLN_OYMV|NON-STRUCTURAL replication polyprotein|Ononis yellow mosaic virus

Query: 2 TSKPYAFT 9
+S PYAFT
Sbjct: 1344 SSSPYAFT 1351




48|Sequence|236|245|YAFTARPWET

>sp|FP_NPVLD|FP protein|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 2 AFTARPWET 10
A TAR W+T
Sbjct: 100 AATARDWQT 108


>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1

Query: 1 YAFTARP 7
YAF+ARP
Sbjct: 32 YAFSARP 38


>sp|V51K_BPL79|51.5 kDa protein|Lactococcus phage (isolate 7-9) (Lactococcus

Query: 2 AFTARPW 8
FTA PW
Sbjct: 103 GFTATPW 109


>sp|VF224_IIV3|PROBABLE cysteine proteinase 024R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 YAFTARPWE 9
YAF R WE
Sbjct: 74 YAFLHREWE 82


>sp|NCTSP_BPN4|NON-CONTRACTILE tail sheath|Enterobacteria phage N4 (Bacteriophage N4)

Query: 1 YAFTARPWET 10
Y A PWET
Sbjct: 836 YFIEANPWET 845


>sp|REP2_MVDC2|PARA-REP C2|Milk vetch dwarf C2 alphasatellite

Query: 3 FTARPWE 9
F+ RPW+
Sbjct: 147 FSLRPWQ 153




49|Sequence|241|250|RPWETRKTES

>sp|UL49_SHV21|UNCHARACTERIZED gene 66 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 3 WETRKTE 9
W+TR+T+
Sbjct: 84 WDTRRTQ 90


>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 RPWETRKTE 9
RPW KTE
Sbjct: 28 RPWSPEKTE 36


>sp|VG71_BPML5|REPRESSOR-LIKE immunity protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 PWETRK 7
PW+TRK
Sbjct: 70 PWDTRK 75




50|Sequence|246|255|RKTESIDVMD

>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 2 KTESIDVM 9
KTESIDV+
Sbjct: 257 KTESIDVL 264


>sp|MVP_PSBMV|P3N-PIPO polyprotein|Pea seed-borne mosaic virus (strain

Query: 2 KTESIDVM 9
KTESIDV+
Sbjct: 257 KTESIDVL 264


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 KTESIDVMD 10
KTES+ VM+
Sbjct: 4787 KTESVAVME 4795




51|Sequence|251|260|IDVMDAVGSN

>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 VMDAVGSN 10
VMDA+GSN
Sbjct: 170 VMDALGSN 177


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 VMDAVGSN 10
VMDA+GSN
Sbjct: 170 VMDALGSN 177


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 VMDAVGSN 10
VMDA+GSN
Sbjct: 170 VMDALGSN 177


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 VMDAVGSN 10
VMDA+GSN
Sbjct: 170 VMDALGSN 177


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 VMDAVGSN 10
VMDA+GSN
Sbjct: 170 VMDALGSN 177


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 VMDAVGSN 10
VMDA+GSN
Sbjct: 170 VMDALGSN 177


>sp|ITP_EHV1V|INNER tegument protein|Equine herpesvirus 1 (strain V592)

Query: 1 IDVMDAVGS 9
+DV+DAVGS
Sbjct: 785 VDVVDAVGS 793


>sp|ITP_EHV1B|INNER tegument protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 IDVMDAVGS 9
+DV+DAVGS
Sbjct: 785 VDVVDAVGS 793


>sp|POLG_PVYCH|GENOME polyprotein|Potato virus Y (strain Chinese)

Query: 2 DVMDAVGSN 10
D +DAVG N
Sbjct: 63 DTIDAVGDN 71


>sp|RDRP_BYDVR|PUTATIVE RNA-directed RNA polymerase|Barley yellow dwarf virus (isolate

Query: 1 IDVMDAVG 8
+DV+D+VG
Sbjct: 331 LDVLDSVG 338


>sp|YR826_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R826|Acanthamoeba

Query: 1 IDVMDAVGSN 10
ID+ DA G N
Sbjct: 277 IDIFDASGEN 286


>sp|VP2_RRSVT|OUTER capsid protein VP2|Rice ragged stunt virus (isolate

Query: 4 MDAVGSN 10
MDAVG N
Sbjct: 618 MDAVGEN 624




52|Sequence|256|265|AVGSNIVVST

>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)

Query: 1 AVGSNIVVST 10
A+G NI+V++
Sbjct: 28 AIGGNIIVNS 37


>sp|PG047_VACCW|IMMUNE evasion protein OPG047|Vaccinia virus (strain Western Reserve)

Query: 1 AVGSNIVVST 10
A+G NI+V++
Sbjct: 28 AIGGNIIVNS 37


>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)

Query: 1 AVGSNIVVST 10
A+G NI+V++
Sbjct: 28 AIGGNIIVNS 37


>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 AVGSNIVVST 10
A+G NI+V++
Sbjct: 28 AIGGNIIVNS 37


>sp|DPOL2_BPKIM|DEPOLYMERASE 1, capsule K47-specific|Klebsiella phage vB_KpnP_IME205

Query: 1 AVGSNIVVST 10
A+GSN++V T
Sbjct: 561 ALGSNVIVPT 570




53|Sequence|261|270|IVVSTRTGEV

>sp|VF205_IIV3|PUTATIVE DNA ligase 052L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 IVVSTRTGEV 10
+V+ TR+GEV
Sbjct: 383 VVLITRSGEV 392




54|Sequence|266|275|RTGEVMRILP

>sp|1A_AMV|REPLICATION protein 1a|Alfalfa mosaic virus (AMV)

Query: 2 TGEVMRILP 10
TGE++RI P
Sbjct: 692 TGEILRINP 700


>sp|TIPI_BPN15|TAIL tip assembly protein I|Escherichia phage N15 (Bacteriophage N15)

Query: 2 TGEVMRILP 10
TG+V+RI+P
Sbjct: 72 TGDVIRIVP 80




55|Sequence|271|280|MRILPRMHED

>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 4 LPRMHE 9
LPRMHE
Sbjct: 801 LPRMHE 806


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 4 LPRMHE 9
LPRMHE
Sbjct: 801 LPRMHE 806


>sp|Y1940_ATV|PROTEIN ORF1940|Acidianus two-tailed virus (ATV)

Query: 4 LPRMHED 10
LP+M+ED
Sbjct: 977 LPKMYED 983


>sp|TERS_BPLSK|TERMINASE small subunit|Lactococcus phage SK1 (Lactococcus lactis

Query: 3 ILPRMHED 10
ILP+M+E+
Sbjct: 11 ILPKMYEE 18


>sp|TERS_BPLP2|TERMINASE small subunit|Lactococcus phage p2 (Lactococcus lactis

Query: 3 ILPRMHED 10
ILP+M+E+
Sbjct: 11 ILPKMYEE 18




56|Sequence|276|285|RMHEDINEEW

>sp|MVP_TUMVQ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Quebec)

Query: 1 RMHEDINEE 9
RMHE+ N+E
Sbjct: 105 RMHEEANKE 113


>sp|MVP_TUMVJ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Japanese)

Query: 1 RMHEDINEE 9
RMHE+ N+E
Sbjct: 105 RMHEEANKE 113


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1 RMHEDINEEW 10
++HE IN +W
Sbjct: 1961 KLHEWINSDW 1970


>sp|YR818_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R818|Acanthamoeba

Query: 1 RMHEDINEEW 10
R+H+ + +EW
Sbjct: 777 RLHQRVEDEW 786


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1 RMHEDINEEW 10
++HE IN +W
Sbjct: 1960 KLHEWINTDW 1969


>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)

Query: 1 RMHEDINEE 9
RMHE+ N+E
Sbjct: 105 RMHEEANKE 113


>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)

Query: 1 RMHEDINEE 9
RMHE+ N+E
Sbjct: 105 RMHEEANKE 113


>sp|CVC2_ILTVT|CAPSID vertex component 2|Infectious laryngotracheitis virus (strain

Query: 2 MHEDINEEW 10
M EDI EW
Sbjct: 276 MLEDIRAEW 284


>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_SIVMB|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate MB66)

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 106 QMHEDIVNLW 115


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 3 HEDINEEW 10
H D+N+ W
Sbjct: 891 HPDLNQSW 898


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 3 HEDINEEW 10
H D+N+ W
Sbjct: 891 HPDLNQSW 898


>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 HEDINEEW 10
H+DI EW
Sbjct: 374 HDDIPHEW 381


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1 RMHEDINEEW 10
R+H+ INE++
Sbjct: 1967 RLHQWINEDY 1976


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 RMHEDINEEW 10
R+H+ INE++
Sbjct: 1965 RLHQWINEDY 1974


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 RMHEDINEEW 10
R+H+ INE++
Sbjct: 1965 RLHQWINEDY 1974


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1 RMHEDINEEW 10
R+H+ INE++
Sbjct: 1964 RLHQWINEDY 1973


>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_SIVCZ|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate CPZ

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|CVC2_PSHV1|CAPSID vertex component 2|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 MHEDINEEW 10
+ ED+ EW
Sbjct: 298 LQEDVRREW 306


>sp|NSP_BGYMV|NUCLEAR shuttle protein|Bean golden yellow mosaic virus

Query: 1 RMHEDIN 7
RMH D+N
Sbjct: 109 RMHTDVN 115


>sp|NSP_BGYMJ|NUCLEAR shuttle protein|Bean golden yellow mosaic virus

Query: 1 RMHEDIN 7
RMH D+N
Sbjct: 109 RMHTDVN 115


>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 104 QMHEDIISLW 113


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1 RMHEDINEEW 10
R+HE I+ +W
Sbjct: 1957 RLHEWISGDW 1966


>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIVSLW 111


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4

Query: 3 HEDINEEW 10
++D+NE+W
Sbjct: 139 YQDMNEQW 146


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 104 QMHEDIISLW 113


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 103 QMHEDIISLW 112


>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 103 QMHEDIISLW 112


>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 103 QMHEDIISLW 112


>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 103 QMHEDIISLW 112


>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 103 QMHEDIISLW 112


>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 103 QMHEDIISLW 112


>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 103 QMHEDIISLW 112


>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 103 QMHEDIISLW 112


>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHEDI W
Sbjct: 102 QMHEDIISLW 111


>sp|POLS_IPNVN|STRUCTURAL polyprotein|Infectious pancreatic necrosis virus (strain

Query: 3 HEDINEEW 10
H+D+ E W
Sbjct: 500 HKDVLESW 507


>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RMHEDINEEW 10
+MHED+ W
Sbjct: 102 QMHEDVISLW 111


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 3 HEDINEEW 10
HED+ W
Sbjct: 1211 HEDMTHSW 1218




57|Sequence|281|290|INEEWISDKT

>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2 NEEWISDK 9
+EEWI++K
Sbjct: 631 HEEWITNK 638


>sp|ITP_PSHV1|INNER tegument protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 NEEWISDK 9
NE+W+S++
Sbjct: 566 NEQWLSER 573


>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2 NEEWISDK 9
+EEWI+ K
Sbjct: 631 HEEWITSK 638


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 2 NEEWISDK 9
+EEWI+ K
Sbjct: 631 HEEWITSK 638


>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 NEEWISDK 9
N WI+DK
Sbjct: 164 NNSWIADK 171


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1 INEEWISDKT 10
+ EW+ DKT
Sbjct: 3353 LENEWMEDKT 3362


>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)

Query: 2 NEEWISDK 9
N WI+DK
Sbjct: 164 NNSWIADK 171


>sp|MCE_RGDV|PUTATIVE mRNA-capping enzyme P5|Rice gall dwarf virus (RGDV)

Query: 1 INEEWISD 8
I ++WISD
Sbjct: 313 ITQQWISD 320


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 4 EWISDKT 10
EW+ DKT
Sbjct: 3355 EWMEDKT 3361


>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate

Query: 1 INEEWIS 7
INEEW++
Sbjct: 48 INEEWLT 54


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 4 EWISDKT 10
EW+ DKT
Sbjct: 3355 EWMEDKT 3361


>sp|RP35_FOWPN|DNA-DIRECTED RNA polymerase 35 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 1 INEEWIS 7
INEEW++
Sbjct: 46 INEEWLT 52


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 4 EWISDKT 10
EW+ DKT
Sbjct: 3352 EWMEDKT 3358


>sp|COLL3_MIMIV|COLLAGEN-LIKE protein 3|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 INEEWI 6
IN+EW+
Sbjct: 349 INDEWV 354


>sp|RLIG_ASFB7|PUTATIVE RNA-ligase|African swine fever virus (strain

Query: 2 NEEWISDKT 10
N WI DKT
Sbjct: 172 NYCWIGDKT 180


>sp|VF448_ASFWA|UNCHARACTERIZED protein M448R|African swine fever virus (isolate

Query: 2 NEEWISDKT 10
N WI DKT
Sbjct: 172 NYCWIGDKT 180


>sp|VF448_ASFP4|PUTATIVE RNA-ligase|African swine fever virus (isolate

Query: 2 NEEWISDKT 10
N WI DKT
Sbjct: 172 NYCWIGDKT 180




58|Sequence|286|295|ISDKTRFAYD

>sp|E1B55_ADEM1|E1B 55 kDa protein|Murine adenovirus A serotype 1

Query: 1 ISDKTRFAYD 10
+ D+TRF D
Sbjct: 416 VPDRTRFTVD 425


>sp|POLA_CHPVE|POLYPROTEIN p69|Cryphonectria hypovirus 1 (strain EP713)

Query: 3 DKTRFAYD 10
+KTRFA D
Sbjct: 479 NKTRFALD 486




59|Sequence|291|300|RFAYDGLKRQ

>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 2 FAYDGLKRQ 10
FAY+GLKR+
Sbjct: 700 FAYEGLKRR 708


>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 RFAYDGLKRQ 10
+FAYD L+RQ
Sbjct: 462 QFAYDSLRRQ 471


>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 RFAYDGLKRQ 10
+FAYD L+RQ
Sbjct: 462 QFAYDSLRRQ 471


>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 RFAYDGLKRQ 10
+FAYD L+RQ
Sbjct: 462 QFAYDSLRRQ 471


>sp|LTP_ALHV1|LARGE tegument protein deneddylase|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 RFAYDG 6
RFAYDG
Sbjct: 2195 RFAYDG 2200


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 2 FAYDGLK 8
FAY+GLK
Sbjct: 701 FAYEGLK 707


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 2 FAYDGLK 8
FAY+GLK
Sbjct: 698 FAYEGLK 704


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 2 FAYDGLK 8
FAY+GLK
Sbjct: 697 FAYEGLK 703


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2 FAYDGLK 8
FAY+GLK
Sbjct: 699 FAYEGLK 705


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 2 FAYDGLK 8
FAY+GLK
Sbjct: 699 FAYEGLK 705


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2 FAYDGLK 8
FAY+GLK
Sbjct: 699 FAYEGLK 705


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 2 FAYDGLK 8
FAY+GLK
Sbjct: 698 FAYEGLK 704


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 2 FAYDGLK 8
FAY+GLK
Sbjct: 699 FAYEGLK 705


>sp|POL_BIV29|GAG-POL polyprotein|Bovine immunodeficiency virus (strain R29)

Query: 1 RFAYDGLKRQ 10
R+AY+G++ +
Sbjct: 1061 RYAYEGMREE 1070


>sp|YL274_MIMIV|UNCHARACTERIZED protein L274|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 FAYDGLKRQ 10
++++G+KRQ
Sbjct: 38 YSFEGMKRQ 46


>sp|GB_ALHV1|ENVELOPE glycoprotein B|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 RFAYDGLKRQ 10
+FAYD L+ Q
Sbjct: 461 QFAYDTLRAQ 470


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2 FAYDGLK 8
F+YDGL+
Sbjct: 1282 FSYDGLR 1288


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 FAYDGLK 8
F+YDGL+
Sbjct: 1282 FSYDGLR 1288


>sp|GB_EHV2|ENVELOPE glycoprotein B|Equine herpesvirus 2 (strain 86/87)

Query: 1 RFAYDGLKR 9
+FAYD L++
Sbjct: 457 QFAYDNLRK 465


>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 1 RFAYDGLKR 9
R AY+GL++
Sbjct: 1193 RLAYEGLRQ 1201


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 2 FAYDGLK 8
FAY+GL+
Sbjct: 699 FAYEGLR 705


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 2 FAYDGLK 8
FAY+GL+
Sbjct: 697 FAYEGLR 703


>sp|VNS3_BRD|NON-STRUCTURAL protein NS3|Broadhaven virus (BRD)

Query: 1 RFAYDGLKRQ 10
R AY LKRQ
Sbjct: 80 RAAYQKLKRQ 89


>sp|FUS_PI3B|FUSION glycoprotein F0|Bovine parainfluenza 3 virus (BPIV-3)

Query: 4 YDGLKRQ 10
YDGLK Q
Sbjct: 83 YDGLKLQ 89


>sp|POLG_CILVC|RNA replication protein|Citrus leprosis virus C (isolate

Query: 1 RFAYDGL 7
+F YDGL
Sbjct: 473 KFVYDGL 479


>sp|AKT_MLVAT|AKT kinase-transforming protein|AKT8 murine leukemia virus

Query: 5 DGLKRQ 10
DGLKRQ
Sbjct: 129 DGLKRQ 134




60|Sequence|296|305|GLKRQRLTEP

>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51

Query: 3 KRQRLTEP 10
KRQRLTEP
Sbjct: 239 KRQRLTEP 246


>sp|VE8E2_HPV51|PROTEIN E8^E2C|Human papillomavirus 51

Query: 3 KRQRLTEP 10
KRQRLTEP
Sbjct: 53 KRQRLTEP 60


>sp|ICP0_SUHVF|E3 ubiquitin-protein ligase ICP0|Suid herpesvirus 1 (strain

Query: 1 GLKRQRLTE 9
G+ RQR+TE
Sbjct: 191 GMNRQRVTE 199


>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)

Query: 1 GLKRQRLT 8
G+KRQR+T
Sbjct: 754 GIKRQRMT 761


>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)

Query: 1 GLKRQRLT 8
G+KRQR+T
Sbjct: 754 GIKRQRMT 761


>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann

Query: 1 GLKRQRLT 8
G+KRQR+T
Sbjct: 754 GIKRQRMT 761


>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann

Query: 1 GLKRQRLT 8
G+KRQR+T
Sbjct: 754 GIKRQRMT 761


>sp|CAPSD_SJNNV|CAPSID protein alpha|Striped jack nervous necrosis virus

Query: 3 KRQRLTEP 10
K QRLT P
Sbjct: 173 KEQRLTSP 180




61|Sequence|301|310|RLTEPMVRNE

>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 LTEPMVRN 9
++EP+VRN
Sbjct: 645 ISEPVVRN 652


>sp|079R_FRG3G|UNCHARACTERIZED protein 079R|Frog virus 3 (isolate Goorha)

Query: 3 TEPMVRN 9
TEP VRN
Sbjct: 41 TEPAVRN 47




62|Sequence|306|315|MVRNEKGLLT

>sp|POL_AVIRE|GAG-POL polyprotein|Avian reticuloendotheliosis virus

Query: 1 MVRNEKGLLT 10
M+ E+GLLT
Sbjct: 676 MIYRERGLLT 685


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 2 VRNEKG 7
VRNEKG
Sbjct: 1490 VRNEKG 1495




63|Sequence|311|320|KGLLTYTSWE

>sp|DEPOL_BPK05|PROBABLE tail spike protein|Klebsiella phage 0507-KN2-1 (Taipeivirus 0507KN21)

Query: 2 GLLTYTSWE 10
G++TY SWE
Sbjct: 1174 GIITYESWE 1182


>sp|YR347_MIMIV|UNCHARACTERIZED protein R347|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GLLTYTSWE 10
LLTY WE
Sbjct: 254 ALLTYQRWE 262


>sp|DPO23_BPK64|PROBABLE tail spike protein|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 2 GLLTYTSW 9
GL+TY SW
Sbjct: 720 GLITYESW 727


>sp|TEG6_EHV1K|TEGUMENT protein UL55 homolog|Equine herpesvirus 1 (strain Kentucky

Query: 4 LTYTSWE 10
LT++SWE
Sbjct: 52 LTWSSWE 58


>sp|TEG6_EHV1B|TEGUMENT protein UL55 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 4 LTYTSWE 10
LT++SWE
Sbjct: 52 LTWSSWE 58


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 KGLLTYTSW 9
+GLL+ T W
Sbjct: 156 RGLLSLTEW 164


>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 KGLLTYTSW 9
+GLL+ T W
Sbjct: 156 RGLLSLTEW 164


>sp|UL87_ELHVK|PROTEIN U58|Elephantid herpesvirus 1 (isolate Asian

Query: 1 KGLLTYTSWE 10
+GLL+ WE
Sbjct: 147 RGLLSLKKWE 156


>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 GLLTYTSW 9
+L YTSW
Sbjct: 301 AVLDYTSW 308


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 GLLTYTSW 9
G++TY W
Sbjct: 3520 GIVTYNEW 3527


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 GLLTYTSW 9
G++TY W
Sbjct: 3527 GIVTYNEW 3534


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 GLLTYTSW 9
G++TY W
Sbjct: 3520 GIVTYNEW 3527


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 GLLTYTSW 9
G++TY W
Sbjct: 3527 GIVTYNEW 3534




64|Sequence|316|325|YTSWEDALSR

>sp|MVP_AMVYS|MOVEMENT protein|Alfalfa mosaic virus (strain YSMV)

Query: 1 YTSWEDALSR 10
Y WED LSR
Sbjct: 175 YPIWEDELSR 184


>sp|MVP_AMVST|MOVEMENT protein|Alfalfa mosaic virus (strain Strasbourg)

Query: 1 YTSWEDALSR 10
Y WED LSR
Sbjct: 175 YPIWEDELSR 184


>sp|MVP_AMVLE|MOVEMENT protein|Alfalfa mosaic virus (strain 425

Query: 1 YTSWEDALSR 10
Y WED LSR
Sbjct: 175 YPIWEDELSR 184


>sp|MVP_AMV|MOVEMENT protein|Alfalfa mosaic virus (AMV)

Query: 1 YTSWEDALSR 10
Y WED LSR
Sbjct: 175 YPIWEDELSR 184


>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)

Query: 3 SWEDALSR 10
+WE+AL+R
Sbjct: 49 TWEEALTR 56


>sp|TOP1_VACCW|DNA topoisomerase 1B|Vaccinia virus (strain Western Reserve)

Query: 3 SWEDALSR 10
+WE+AL+R
Sbjct: 49 TWEEALTR 56


>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 SWEDALSR 10
+WE+AL+R
Sbjct: 49 TWEEALTR 56


>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)

Query: 3 SWEDALSR 10
+WE+AL+R
Sbjct: 49 TWEEALTR 56


>sp|TOP1_MONPV|DNA topoisomerase I|Monkeypox virus (MPXV)

Query: 3 SWEDALSR 10
+WE+AL+R
Sbjct: 49 TWEEALTR 56


>sp|V218_FOWPN|PUTATIVE ankyrin repeat protein FPV218|Fowlpox virus (strain NVSL) (FPV)

Query: 1 YTSWED 6
YTSW D
Sbjct: 425 YTSWHD 430


>sp|TIP_SHV24|TYROSINE-PROTEIN kinase-interacting protein|Saimiriine herpesvirus 2 (strain

Query: 1 YTSWEDA 7
YTS+EDA
Sbjct: 85 YTSFEDA 91


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 1 YTSWEDALS 9
YT WE LS
Sbjct: 1818 YTDWELGLS 1826


>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 3 SWEDALSR 10
SWED LS+
Sbjct: 97 SWEDTLSQ 104


>sp|CAPSD_PASV1|CAPSID polyprotein VP90|Porcine astrovirus 1 (PAstV-1)

Query: 1 YTSWEDALS 9
Y S++DALS
Sbjct: 375 YASYQDALS 383


>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)

Query: 1 YTSWEDALS 9
Y S++DALS
Sbjct: 370 YASYQDALS 378


>sp|Y286_ATV|UNCHARACTERIZED protein ORF286|Acidianus two-tailed virus (ATV)

Query: 1 YTSWEDAL 8
Y +W DAL
Sbjct: 104 YGNWHDAL 111


>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate

Query: 3 SWEDALS 9
SW DALS
Sbjct: 751 SWMDALS 757


>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 2 TSWEDALSR 10
T WED+ SR
Sbjct: 1115 TDWEDSRSR 1123


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1 YTSWEDALS 9
YT+WE +S
Sbjct: 1817 YTNWEVGIS 1825


>sp|SPIKE_CVCAK|SPIKE glycoprotein|Canine coronavirus (strain K378) (CCoV)

Query: 1 YTSWEDAL 8
YTS+ DAL
Sbjct: 467 YTSYTDAL 474


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 3 SWEDALS 9
SWEDA++
Sbjct: 514 SWEDAIA 520




65|Sequence|321|330|DALSRVAGML

>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)

Query: 1 DALSRVAG 8
DAL RVAG
Sbjct: 337 DALRRVAG 344




66|Sequence|326|335|VAGMLQSFQG

>sp|DEPOL_BPKN1|DEPOLYMERASE, capsule KN1-specific|Klebsiella phage KN1-1 (Bacteriophage KN1-1)

Query: 1 VAGMLQSFQG 10
VAGML F G
Sbjct: 186 VAGMLLGFNG 195




67|Sequence|331|340|QSFQGKDVAA

>sp|MUNS_REOVL|PROTEIN mu-NS|Reovirus type 1 (strain Lang)

Query: 1 QSFQGKDVA 9
+SFQ DVA
Sbjct: 117 ESFQASDVA 125


>sp|MUNS_REOVD|PROTEIN mu-NS|Reovirus type 3 (strain Dearing)

Query: 1 QSFQGKDVA 9
+SFQ DVA
Sbjct: 117 ESFQASDVA 125




68|Sequence|336|345|KDVAAIAGGL

>sp|RPOLV_BPN4|VIRION DNA-directed RNA polymerase|Enterobacteria phage N4 (Bacteriophage

Query: 1 KDVAAIAG 8
KDVAAI G
Sbjct: 1173 KDVAAITG 1180


>sp|VIE1_BHV4D|PROBABLE E3 ubiquitin-protein ligase IE1|Bovine herpesvirus 4 (strain

Query: 1 KDVAAIAGGL 10
KDV + GGL
Sbjct: 237 KDVMIVVGGL 246




69|Sequence|341|350|IAGGLVDAEA

>sp|VPRL_VILV2|PROBABLE Vpr-like protein|Maedi visna virus (strain 1514

Query: 3 GGLVDAEA 10
GGLV+AE
Sbjct: 10 GGLVEAEG 17


>sp|VPRL_VILV1|PROBABLE Vpr-like protein|Maedi visna virus (strain 1514

Query: 3 GGLVDAEA 10
GGLV+AE
Sbjct: 10 GGLVEAEG 17


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 1 IAGGLVDA 8
I GG+VDA
Sbjct: 1322 ICGGVVDA 1329




70|Sequence|346|355|VDAEALVALK

>sp|MCP_PSHV1|MAJOR capsid protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 VDAEALVAL 9
VDAEALVA
Sbjct: 906 VDAEALVAF 914


>sp|CAPSD_MASV1|CAPSID polyprotein VP86|Mink astrovirus 1 (MAstV-1)

Query: 1 VDAEALVA 8
VDAEAL+A
Sbjct: 762 VDAEALLA 769


>sp|CAPSD_BPMD2|PROBABLE major capsid protein gp17|Mycobacterium phage D29

Query: 2 DAEALVAL 9
DAEA VAL
Sbjct: 301 DAEAFVAL 308




71|Sequence|351|360|LVALKDLLNR

>sp|VE1_BPV4|REPLICATION protein E1|Bos taurus papillomavirus 4 (Bovine

Query: 1 LVALKDLLNR 10
+ ALKDLL+R
Sbjct: 417 MSALKDLLHR 426


>sp|PRIM_EHV2|DNA primase|Equine herpesvirus 2 (strain 86/87)

Query: 1 LVALKDLLNR 10
LVAL +LNR
Sbjct: 620 LVALAKILNR 629


>sp|VF355_IIV6|PUTATIVE CTD phosphatase-like protein 355R|Invertebrate iridescent virus 6

Query: 1 LVALKDLLNR 10
L+ LKD+LNR
Sbjct: 170 LMRLKDVLNR 179


>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47

Query: 1 LVALKDLLN 9
L ALKDLL+
Sbjct: 413 LAALKDLLH 421


>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25

Query: 1 LVALKDLLN 9
L ALKDLL+
Sbjct: 412 LAALKDLLH 420


>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19

Query: 1 LVALKDLLN 9
L ALKDLL+
Sbjct: 412 LAALKDLLH 420


>sp|A1_BPQBE|MINOR capsid protein A1|Escherichia virus Qbeta (Bacteriophage Q-beta)

Query: 2 VALKDLL 8
VALKDLL
Sbjct: 202 VALKDLL 208




72|Sequence|356|365|DLLNRVDSDT

>sp|TFA_LAMBD|TAIL fiber assembly protein|Escherichia phage lambda (Bacteriophage

Query: 2 LLNRVDSDT 10
LLNRVD+ T
Sbjct: 173 LLNRVDTST 181


>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51

Query: 1 DLLNRVDSDT 10
DL+N +DS+T
Sbjct: 45 DLINFIDSET 54




73|Sequence|361|370|VDSDTLCTEE

>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4 DTLCTEE 10
+T+CTEE
Sbjct: 88 NTMCTEE 94


>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 DTLCTEE 10
+T+CTEE
Sbjct: 87 NTMCTEE 93


>sp|PG108_VACCW|ENVELOPE protein OPG108|Vaccinia virus (strain Western Reserve)

Query: 4 DTLCTEE 10
+T+CTEE
Sbjct: 87 NTMCTEE 93


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 2 DSDTLC 7
DSDTLC
Sbjct: 955 DSDTLC 960


>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)

Query: 4 DTLCTEE 10
+T+CTEE
Sbjct: 87 NTMCTEE 93


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 SDTLCTEE 10
SDT+CT +
Sbjct: 453 SDTICTPD 460


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 SDTLCTEE 10
SDT+CT +
Sbjct: 453 SDTICTPD 460


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 3 SDTLCTEE 10
SDTLC E
Sbjct: 141 SDTLCISE 148


>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 SDTLCTEE 10
SDTLC E
Sbjct: 141 SDTLCISE 148


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1 VDSDTLCTEE 10
++ D+LCT +
Sbjct: 1725 IEDDSLCTND 1734


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1 VDSDTLCTEE 10
++ D+LCT +
Sbjct: 1725 IEDDSLCTND 1734




74|Sequence|366|375|LCTEEVFPTA

>sp|RDRP_ROTW3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 3 TEEVFPTA 10
T E+FPTA
Sbjct: 115 TSELFPTA 122


>sp|RDRP_ROTSP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Patton/G3P[X]) (RV-A)

Query: 3 TEEVFPTA 10
T E+FPTA
Sbjct: 115 TSELFPTA 122


>sp|RDRP_ROTSH|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/South

Query: 3 TEEVFPTA 10
T E+FPTA
Sbjct: 115 TSELFPTA 122


>sp|RDRP_ROTS1|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 3 TEEVFPTA 10
T E+FPTA
Sbjct: 115 TSELFPTA 122


>sp|RDRP_ROTRF|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1])

Query: 3 TEEVFPTA 10
T E+FPTA
Sbjct: 115 TSELFPTA 122


>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 3 TEEVFPTA 10
T E+FPTA
Sbjct: 115 TSELFPTA 122


>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 3 TEEVFPTA 10
T E+FPTA
Sbjct: 115 TSELFPTA 122


>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 3 TEEVFPTA 10
T E+FPTA
Sbjct: 115 TSELFPTA 122


>sp|RDRP_ROTBU|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 3 TEEVFPTA 10
T E+FPTA
Sbjct: 115 TSELFPTA 122


>sp|RDRP_ROTBN|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 3 TEEVFPTA 10
T E+FPTA
Sbjct: 115 TSELFPTA 122


>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate

Query: 3 TEEVFPTA 10
T E+FPTA
Sbjct: 115 TSELFPTA 122


>sp|RIR1_IIV3|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 LCTEEVFPT 9
LC+E V PT
Sbjct: 318 LCSEVVLPT 326


>sp|RDRP_SHVX|RNA replication protein|Shallot virus X (ShVX)

Query: 1 LCTEEVFPTA 10
LC++EV TA
Sbjct: 1122 LCSDEVLYTA 1131




75|Sequence|371|380|VFPTAGAGTD

>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 VFPTAGAGTD 10
+FPTAG TD
Sbjct: 118 LFPTAGEYTD 127


>sp|CAPSH_BPKVM|MAJOR capsid protein|Vibrio phage KVP40 (isolate Vibrio

Query: 2 FPTAGAGTD 10
FPT GA TD
Sbjct: 161 FPTTGAATD 169


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 VFPTAGAGTD 10
+FP+ GTD
Sbjct: 237 LFPSGNGGTD 246


>sp|NS1_AEDEV|INITIATOR protein NS1|Aedes densonucleosis virus (strain GKV

Query: 2 FPTAGAGT 9
FPT G+G+
Sbjct: 169 FPTVGSGS 176


>sp|MCAPS_BWYVG|READTHROUGH protein P3-RTD|Beet western yellows virus (isolate

Query: 3 PTAGAGTD 10
PTAG G+D
Sbjct: 478 PTAGGGSD 485


>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype

Query: 1 VFPTAGAGTD 10
VFP G G D
Sbjct: 10 VFPKPGMGKD 19


>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17

Query: 3 PTAGAGTD 10
P AG GTD
Sbjct: 203 PAAGEGTD 210


>sp|TGB1_LOLV|MOVEMENT and silencing protein TGBp1|Lolium latent virus (isolate

Query: 2 FPTAGAGTD 10
FP AGTD
Sbjct: 142 FPIEAAGTD 150


>sp|MCP_ELHVK|MAJOR capsid protein|Elephantid herpesvirus 1 (isolate Asian

Query: 1 VFPTAGAGTD 10
VFP A G D
Sbjct: 1099 VFPVASFGND 1108


>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37

Query: 3 PTAGAGTD 10
P AG GTD
Sbjct: 203 PAAGEGTD 210


>sp|YR553_MIMIV|UNCHARACTERIZED protein R553|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VFPTAGAGT 9
V P+AG GT
Sbjct: 332 VVPSAGLGT 340


>sp|DPOL_BPPZA|DNA polymerase|Bacillus phage PZA (Bacteriophage PZA)

Query: 1 VFPTAGAGTD 10
VFPT G D
Sbjct: 207 VFPTLSLGLD 216


>sp|DPOL_BPPH2|DNA polymerase|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 1 VFPTAGAGTD 10
VFPT G D
Sbjct: 210 VFPTLSLGLD 219


>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9

Query: 2 FPTAGAGTD 10
FP GAGT+
Sbjct: 403 FPLDGAGTN 411


>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 1 VFPTAGAGTD 10
+F T G+G D
Sbjct: 12 IFQTVGSGLD 21


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VFPTAGAGTD 10
+F T G+G D
Sbjct: 8 IFQTVGSGLD 17


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VFPTAGAGTD 10
+F T G+G D
Sbjct: 8 IFQTVGSGLD 17


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VFPTAGAGTD 10
+F T G+G D
Sbjct: 8 IFQTVGSGLD 17


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VFPTAGAGTD 10
+F T G+G D
Sbjct: 8 IFQTVGSGLD 17


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VFPTAGAGTD 10
+F T G+G D
Sbjct: 8 IFQTVGSGLD 17


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VFPTAGAGTD 10
+F T G+G D
Sbjct: 8 IFQTVGSGLD 17


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VFPTAGAGTD 10
+F T G+G D
Sbjct: 8 IFQTVGSGLD 17


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VFPTAGAGTD 10
+F T G+G D
Sbjct: 8 IFQTVGSGLD 17


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VFPTAGAGTD 10
+F T G+G D
Sbjct: 8 IFQTVGSGLD 17


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VFPTAGAGTD 10
+F T G+G D
Sbjct: 8 IFQTVGSGLD 17


>sp|MYC_AVIME|VIRAL myc transforming protein|Avian retrovirus MH2E21

Query: 3 PTAGAGT 9
PTAG G+
Sbjct: 219 PTAGGGS 225




76|Sequence|376|385|GAGTDLRSNY

>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 2 AGTDLRSNY 10
AGT RSNY
Sbjct: 217 AGTGFRSNY 225


>sp|438L_IIV6|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Invertebrate

Query: 2 AGTDLRSNY 10
AG DLRS Y
Sbjct: 176 AGIDLRSAY 184


>sp|B_SPV4|INTERNAL scaffolding protein ORF3|Spiroplasma virus 4 (SpV4)

Query: 1 GAGTDLRS 8
G GTDLRS
Sbjct: 53 GEGTDLRS 60


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 1 GAGTDLRS 8
GAG DLR+
Sbjct: 6082 GAGNDLRA 6089


>sp|YR789_MIMIV|PUTATIVE ankyrin repeat protein R789|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GAGTDLRSN 9
G G D+RSN
Sbjct: 377 GKGVDIRSN 385


>sp|YR845_MIMIV|PUTATIVE ankyrin repeat protein R845|Acanthamoeba polyphaga mimivirus

Query: 3 GTDLRSNY 10
G D+RSNY
Sbjct: 9 GADVRSNY 16


>sp|UL21_HCMVA|UNCHARACTERIZED protein UL21|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 AGTDLRSN 9
+ TDLRSN
Sbjct: 138 SSTDLRSN 145


>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39

Query: 3 GTDLRSN 9
GTD+R+N
Sbjct: 278 GTDIRAN 284




77|Sequence|381|390|LRSNYLLNTT

>sp|M21_AMPV1|PROTEIN M2-1|Avian metapneumovirus (isolate Canada

Query: 1 LRSNYLLN 8
LRSNYLLN
Sbjct: 37 LRSNYLLN 44


>sp|M21_HMPVC|PROTEIN M2-1|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 1 LRSNYLLN 8
+RSNYLLN
Sbjct: 37 IRSNYLLN 44


>sp|PRIM_MUHVS|DNA primase|Murid herpesvirus 1 (strain Smith)

Query: 2 RSNYLLNTT 10
R NYLLN T
Sbjct: 427 RRNYLLNDT 435


>sp|M21_MPV15|PROTEIN M2-1|Murine pneumonia virus (strain 15)

Query: 1 LRSNYLLN 8
LR NY+LN
Sbjct: 36 LRQNYMLN 43


>sp|CAPSD_SPV4|CAPSID protein VP1|Spiroplasma virus 4 (SpV4)

Query: 1 LRSNYLLNTT 10
+++NYL+N T
Sbjct: 383 IQNNYLVNKT 392


>sp|YL780_MIMIV|UNCHARACTERIZED protein L780|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 RSNYLLNT 9
RSN LLNT
Sbjct: 254 RSNNLLNT 261


>sp|M21_TRTV|PROTEIN M2-1|Turkey rhinotracheitis virus (TRTV)

Query: 1 LRSNYLLN 8
+R+NY+LN
Sbjct: 37 VRANYMLN 44




78|Sequence|386|395|LLNTTIAGVE

>sp|VP1_MPRVN|UNCHARACTERIZED protein VP1|Micromonas pusilla reovirus (isolate Netherlands/2005)

Query: 1 LLNTTIAGVE 10
LLNT I+G E
Sbjct: 335 LLNTKISGEE 344


>sp|LTP_EHV1B|LARGE tegument protein deneddylase|Equine herpesvirus 1 (strain Ab4p)

Query: 1 LLNTTIAGVE 10
+LNT AGV+
Sbjct: 1339 ILNTLFAGVD 1348


>sp|GH_PSHV1|ENVELOPE glycoprotein H|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 LLNTTIAGVE 10
L N T+AGV+
Sbjct: 265 LYNATLAGVK 274




79|Sequence|391|400|IAGVEEADVV

>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 3 GVEEADVV 10
GVEE+D++
Sbjct: 1021 GVEESDLI 1028


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 1 IAGVEEADVV 10
IAG+ E+D++
Sbjct: 598 IAGLSESDIL 607


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 1 IAGVEEADVV 10
IAG+ E+D++
Sbjct: 598 IAGLSESDIL 607


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 3 GVEEADVV 10
GVEE+D++
Sbjct: 1025 GVEESDLI 1032




80|Sequence|396|405|EADVVLLVGT

>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1 EADVVLLVGT 10
EADV+L +GT
Sbjct: 2761 EADVILPIGT 2770


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 EADVVLLVGT 10
EADV+L +GT
Sbjct: 2760 EADVILPIGT 2769


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 EADVVLLVGT 10
EADV+L +GT
Sbjct: 2760 EADVILPIGT 2769


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1 EADVVLLVGT 10
EADV+L +GT
Sbjct: 2760 EADVILPIGT 2769


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1 EADVVLLVGT 10
EADV+L +GT
Sbjct: 2760 EADVILPIGT 2769


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1 EADVVLLVGT 10
EADV L +GT
Sbjct: 2760 EADVTLPIGT 2769


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1 EADVVLLVGT 10
EADV L +GT
Sbjct: 2760 EADVTLPIGT 2769


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1 EADVVLLVGT 10
E DV+L +GT
Sbjct: 2761 EPDVILPIGT 2770


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1 EADVVLLVGT 10
E DV+L +GT
Sbjct: 2761 EPDVILPIGT 2770


>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 1 EADVVLLVGT 10
EADVV GT
Sbjct: 2752 EADVVFPTGT 2761


>sp|VG39_ICHVA|UNCHARACTERIZED protein ORF39|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 EADVVLLVG 9
EAD VL+VG
Sbjct: 522 EADDVLVVG 530




81|Sequence|401|410|LLVGTNPRFE

>sp|REP_BFDV|REPLICATION-ASSOCIATED protein|Beak and feather disease virus

Query: 1 LLVGTNPR 8
LLVG++PR
Sbjct: 147 LLVGSSPR 154


>sp|NSP6_ROTHW|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United

Query: 1 LLVGTNPRF 9
LLVGTN F
Sbjct: 14 LLVGTNSMF 22


>sp|NSP6_ROTHK|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 1 LLVGTNPRF 9
LLVGTN F
Sbjct: 14 LLVGTNSMF 22


>sp|PORTL_BPKVM|PORTAL protein|Vibrio phage KVP40 (isolate Vibrio

Query: 5 TNPRFE 10
TNPRF+
Sbjct: 500 TNPRFQ 505


>sp|TERS_BPP22|TERMINASE, small subunit|Salmonella phage P22 (Bacteriophage P22)

Query: 4 GTNPRFE 10
G NP+FE
Sbjct: 17 GRNPKFE 23


>sp|TERS_BPLP7|TERMINASE, small subunit|Enterobacteria phage LP7 (Bacteriophage LP7)

Query: 4 GTNPRFE 10
G NP+FE
Sbjct: 17 GRNPKFE 23


>sp|DPOL_EHV1V|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain V592)

Query: 4 GTNPRFE 10
G NPRFE
Sbjct: 118 GFNPRFE 124


>sp|DPOL_EHV1B|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain Ab4p)

Query: 4 GTNPRFE 10
G NPRFE
Sbjct: 118 GFNPRFE 124


>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4 GTNPRFE 10
G+NP+FE
Sbjct: 473 GSNPKFE 479


>sp|RIR1_FRG3G|PUTATIVE ribonucleoside-diphosphate reductase large subunit|Frog virus 3

Query: 1 LLVGTNPRFE 10
LL+GT+P E
Sbjct: 406 LLLGTSPSVE 415


>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 GTNPRFE 10
G+NP+FE
Sbjct: 473 GSNPKFE 479


>sp|NSP6_ROTAD|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United

Query: 1 LLVGTNPRF 9
LLVGTN F
Sbjct: 14 LLVGTNSMF 22


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 LLVGTNPRF 9
LLVGT+P +
Sbjct: 2207 LLVGTHPAY 2215


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1 LLVGTNPRF 9
LLVGT+P +
Sbjct: 2185 LLVGTHPAY 2193


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 1 LLVGTNPRF 9
LLVGT+P +
Sbjct: 2180 LLVGTHPAY 2188




82|Sequence|406|415|NPRFEAPLFN

>sp|041R_FRG3G|UNCHARACTERIZED protein 041R|Frog virus 3 (isolate Goorha)

Query: 1 NPRFEAP 7
NPRFEAP
Sbjct: 951 NPRFEAP 957


>sp|TERS_BPP22|TERMINASE, small subunit|Salmonella phage P22 (Bacteriophage P22)

Query: 1 NPRFEAP 7
NP+FE+P
Sbjct: 19 NPKFESP 25


>sp|DEPOL_BPK34|DEPOLYMERASE, capsule K63-specific|Klebsiella phage KP34 (Bacteriophage KP34)

Query: 1 NPRFEAPLF 9
N RF PLF
Sbjct: 195 NARFNKPLF 203


>sp|RDRP_PEMVW|PROTEIN P1-P2|Pea enation mosaic virus-1 (strain

Query: 2 PRFEAPLFN 10
PR EAP FN
Sbjct: 704 PREEAPGFN 712


>sp|TERS_BPLP7|TERMINASE, small subunit|Enterobacteria phage LP7 (Bacteriophage LP7)

Query: 1 NPRFEAP 7
NP+FE+P
Sbjct: 19 NPKFESP 25


>sp|ALT_BPT4|NAD(+)--ARGININE ADP-ribosyltransferase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 RFEAPLF 9
RFE P+F
Sbjct: 244 RFETPMF 250


>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15

Query: 2 PRFEAP 7
PRFE+P
Sbjct: 465 PRFESP 470




83|Sequence|411|420|APLFNARIRK

>sp|VP2_BTV3V|OUTER capsid protein VP2|Bluetongue virus 3 (isolate South

Query: 1 APLFNARIR 9
AP+FNAR++
Sbjct: 522 APMFNARVK 530


>sp|VP2_BTV17|OUTER capsid protein VP2|Bluetongue virus 17 (isolate USA)

Query: 1 APLFNARIR 9
+P+FNAR+R
Sbjct: 519 SPMFNARLR 527


>sp|VP2_BTV11|OUTER capsid protein VP2|Bluetongue virus 11 (isolate USA)

Query: 1 APLFNARIR 9
+P+FNAR+R
Sbjct: 519 SPMFNARLR 527


>sp|VP2_BTV1A|OUTER capsid protein VP2|Bluetongue virus 1 (isolate Australia)

Query: 1 APLFNARIR 9
AP+FNA++R
Sbjct: 523 APMFNAKLR 531


>sp|VP2_BTV1S|OUTER capsid protein VP2|Bluetongue virus 1 (isolate South

Query: 1 APLFNARIR 9
AP+FNA++R
Sbjct: 523 APMFNAKLR 531


>sp|VP2_BTV13|OUTER capsid protein VP2|Bluetongue virus 13 (isolate USA)

Query: 2 PLFNARIR 9
P+FNARI+
Sbjct: 523 PMFNARIK 530


>sp|VP2_BTV1V|OUTER capsid protein VP2|Bluetongue virus 1 (isolate South

Query: 1 APLFNARIR 9
AP+FNA +R
Sbjct: 523 APMFNANVR 531


>sp|VP2_BTV10|OUTER capsid protein VP2|Bluetongue virus 10 (isolate USA)

Query: 1 APLFNARIR 9
+P+FNAR++
Sbjct: 519 SPMFNARLK 527


>sp|YL524_MIMIV|UNCHARACTERIZED protein L524|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 LFNARIRK 10
+FN R+RK
Sbjct: 225 IFNQRVRK 232


>sp|DPOL_TUHV2|DNA polymerase catalytic subunit|Tupaiid herpesvirus (strain 2)

Query: 1 APLFNARIRK 10
AP+F+ R+R+
Sbjct: 192 APVFHVRVRR 201


>sp|DPOL_TUHV1|DNA polymerase catalytic subunit|Tupaiid herpesvirus 1 (strain 1)

Query: 1 APLFNARIRK 10
AP+F+ R+R+
Sbjct: 192 APVFHVRVRR 201




84|Sequence|416|425|ARIRKSWLHN

>sp|W_SENDZ|PROTEIN W|Sendai virus (strain Z) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|W_SENDH|PROTEIN W|Sendai virus (strain Harris) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|W_SENDF|PROTEIN W|Sendai virus (strain Fushimi) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|V_SENDZ|PROTEIN V|Sendai virus (strain Z) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|V_SENDH|PROTEIN V|Sendai virus (strain Harris) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|V_SENDF|PROTEIN V|Sendai virus (strain Fushimi) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|PHOSP_SENDZ|PHOSPHOPROTEIN virus (strain Z) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|PHOSP_SENDH|PHOSPHOPROTEIN virus (strain Harris) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|PHOSP_SENDF|PHOSPHOPROTEIN virus (strain Fushimi) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|PHOSP_SEND6|PHOSPHOPROTEIN virus (strain 6/94) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|W_SENDA|PROTEIN W|Sendai virus (strain Hamamatsu) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|PHOSP_SENDA|PHOSPHOPROTEIN virus (strain Hamamatsu) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|PHOSP_SENDO|PHOSPHOPROTEIN virus (strain Ohita) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|W_SENDO|PROTEIN W|Sendai virus (strain Ohita) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|RDRP_POLVP|RNA-DIRECTED RNA polymerase|Pothos latent virus (isolate Pigeonpea/India)

Query: 2 RIRKSW 7
RIRKSW
Sbjct: 109 RIRKSW 114


>sp|V_SENDA|PROTEIN V|Sendai virus (strain Hamamatsu) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|V_SENDO|PROTEIN V|Sendai virus (strain Ohita) (SeV)

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|MU2_REOVD|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 3 (strain Dearing)

Query: 1 ARIRKSWLHN 10
A + K+WLH+
Sbjct: 62 ALVHKNWLHH 71


>sp|MU2_REOVL|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 1 (strain Lang)

Query: 1 ARIRKSWLHN 10
A + K+WLH+
Sbjct: 62 ALVHKNWLHH 71


>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 5 KSWLHN 10
+SWLHN
Sbjct: 47 RSWLHN 52


>sp|RDRP_PNLV|PROTEIN P2-P3|Poinsettia latent virus (isolate Euphorbia

Query: 2 RIRKSWLH 9
R+R SWL+
Sbjct: 936 RLRNSWLY 943


>sp|NRAM_I84A0|NEURAMINIDASE A virus (strain A/Guinea

Query: 2 RIRKSWLHN 10
R+R W+ N
Sbjct: 375 RVRNGWVQN 383


>sp|098R_FRG3G|UNCHARACTERIZED protein 098R|Frog virus 3 (isolate Goorha)

Query: 2 RIRKSWLHN 10
R +K+WLH+
Sbjct: 55 RAQKAWLHS 63




85|Sequence|421|430|SWLHNDLKVA

>sp|PHOSP_SEND6|PHOSPHOPROTEIN virus (strain 6/94) (SeV)

Query: 1 SWLHNDLKVA 10
SWLHN + +
Sbjct: 48 SWLHNTINTS 57


>sp|W_SENDZ|PROTEIN W|Sendai virus (strain Z) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|W_SENDO|PROTEIN W|Sendai virus (strain Ohita) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|W_SENDH|PROTEIN W|Sendai virus (strain Harris) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|W_SENDF|PROTEIN W|Sendai virus (strain Fushimi) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|W_SENDA|PROTEIN W|Sendai virus (strain Hamamatsu) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|V_SENDZ|PROTEIN V|Sendai virus (strain Z) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|V_SENDO|PROTEIN V|Sendai virus (strain Ohita) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|V_SENDH|PROTEIN V|Sendai virus (strain Harris) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|V_SENDF|PROTEIN V|Sendai virus (strain Fushimi) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|V_SENDA|PROTEIN V|Sendai virus (strain Hamamatsu) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|PHOSP_SENDZ|PHOSPHOPROTEIN virus (strain Z) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|PHOSP_SENDO|PHOSPHOPROTEIN virus (strain Ohita) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|PHOSP_SENDH|PHOSPHOPROTEIN virus (strain Harris) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|PHOSP_SENDF|PHOSPHOPROTEIN virus (strain Fushimi) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|PHOSP_SENDA|PHOSPHOPROTEIN virus (strain Hamamatsu) (SeV)

Query: 1 SWLHNDL 7
SWLHN +
Sbjct: 48 SWLHNTI 54


>sp|DPOL_BPT3|DNA-DIRECTED DNA polymerase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 1 SWLHNDLKVA 10
+W+H++++VA
Sbjct: 650 AWIHDEIQVA 659


>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 1 SWLHN 5
SWLHN
Sbjct: 48 SWLHN 52


>sp|VG22_ICHVA|UNCHARACTERIZED protein ORF22|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 LHNDLKVA 10
LH DL+VA
Sbjct: 570 LHRDLRVA 577


>sp|DPOL_SFAVA|DNA polymerase|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 1 SWLHNDLKVA 10
SW+ D KVA
Sbjct: 966 SWMWGDYKVA 975


>sp|MOM_BPD10|METHYLCARBAMOYLASE mom|Escherichia phage D108 (Bacteriophage D108)

Query: 2 WLHNDL 7
WLH+D+
Sbjct: 113 WLHDDM 118


>sp|MOM_BPMU|METHYLCARBAMOYLASE mom|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 WLHNDL 7
WLH+D+
Sbjct: 113 WLHDDM 118


>sp|IL18B_MONPV|INTERLEUKIN-18-BINDING protein|Monkeypox virus (MPXV)

Query: 2 WLHNDLK 8
WL ND+K
Sbjct: 54 WLANDMK 60


>sp|VP10_FDVS|PUTATIVE outer capsid protein p10|Fiji disease virus (isolate Sugarcane)

Query: 1 SWLHNDLK 8
S+LHND++
Sbjct: 97 SFLHNDIQ 104


>sp|CP51_MIMIV|PROBABLE lanosterol 14-alpha demethylase|Acanthamoeba polyphaga mimivirus

Query: 4 HNDLKV 9
HNDLK+
Sbjct: 453 HNDLKI 458


>sp|HELI_PSHV1|DNA replication helicase|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 WLHNDL 7
WLHN L
Sbjct: 241 WLHNAL 246


>sp|VF098_IIV6|UNCHARACTERIZED protein 098R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 SWLHNDL 7
S++HNDL
Sbjct: 224 SFIHNDL 230


>sp|VF380_IIV3|PROBABLE serine/threonine-protein kinase 010L|Invertebrate iridescent virus

Query: 3 LHNDLKV 9
+HND+KV
Sbjct: 326 VHNDIKV 332


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 SWLHNDLK 8
SWL D+K
Sbjct: 1017 SWLSEDIK 1024


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 2 WLHNDLK 8
WLH+++K
Sbjct: 2026 WLHHEIK 2032


>sp|ENV_MLVCB|ENVELOPE glycoprotein|Cas-Br-E murine leukemia virus

Query: 3 LHNDLK 8
+HNDLK
Sbjct: 508 MHNDLK 513




86|Sequence|426|435|DLKVALIGSP

>sp|YL397_MIMIV|UNCHARACTERIZED protein L397|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DLKVALIGSP 10
++KV IGSP
Sbjct: 427 EIKVETIGSP 436


>sp|POL_FLV|GAG-POL polyprotein|Feline leukemia virus

Query: 1 DLKVALIGSP 10
D+K AL+ SP
Sbjct: 972 DIKKALLSSP 981




87|Sequence|431|440|LIGSPVDLTY

>sp|DPOL_OSHVF|DNA polymerase|Ostreid herpesvirus 1 (isolate France)

Query: 1 LIGSPVDLT 9
LIGSP D T
Sbjct: 313 LIGSPNDFT 321


>sp|P32K_ADES1|STRUCTURAL protein p32K|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 LIGSPVDLT 9
L+GSP++LT
Sbjct: 227 LLGSPLNLT 235


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 LIGSPVDLT 9
L GSPVDL+
Sbjct: 2089 LTGSPVDLS 2097


>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 4 SPVDLTY 10
SPVDL+Y
Sbjct: 314 SPVDLSY 320


>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 4 SPVDLTY 10
SPVDL+Y
Sbjct: 314 SPVDLSY 320


>sp|GLYCO_COCAV|GLYCOPROTEIN virus (COCV)

Query: 4 SPVDLTY 10
SPVDL+Y
Sbjct: 315 SPVDLSY 321


>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 4 SPVDLTY 10
SPVDL+Y
Sbjct: 314 SPVDLSY 320


>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 4 SPVDLTY 10
SPVDL+Y
Sbjct: 314 SPVDLSY 320


>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 4 SPVDLTY 10
SPVDL+Y
Sbjct: 314 SPVDLSY 320


>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain

Query: 4 SPVDLTY 10
SPVDL+Y
Sbjct: 314 SPVDLSY 320


>sp|DEPOL_BPK51|DEPOLYMERASE, capsule KL64-specific|Klebsiella phage P510 (Bacteriophage P510)

Query: 1 LIGSPVDLTY 10
L G+P D+TY
Sbjct: 858 LSGNPTDITY 867


>sp|PIF0_NPVAC|PER os infectivity factor 0|Autographa californica nuclear polyhedrosis

Query: 3 GSPVDLTY 10
GSPV +TY
Sbjct: 296 GSPVQITY 303


>sp|HCP16_BPSPP|HEAD completion protein gp16|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 1 LIGSPVDLT 9
IG PVDL+
Sbjct: 83 FIGDPVDLS 91


>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 4 SPVDLTY 10
SPVDL+Y
Sbjct: 314 SPVDLSY 320


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 1 LIGSPVDLT 9
+ GSP+D+T
Sbjct: 880 IYGSPLDIT 888


>sp|YL442_MIMIV|UNCHARACTERIZED protein L442|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 GSPVDLT 9
G PVDLT
Sbjct: 744 GQPVDLT 750


>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)

Query: 3 GSPVDLT 9
GSP+D+T
Sbjct: 878 GSPLDIT 884


>sp|GP_SFTS|ENVELOPMENT polyprotein|Dabie bandavirus (Severe fever with

Query: 3 GSPVDLT 9
GSP+D+T
Sbjct: 878 GSPLDIT 884


>sp|RDRP_PSVJ|RNA-DIRECTED RNA polymerase 2a|Peanut stunt virus (strain J)

Query: 1 LIGSPVDLT 9
L+G PVD++
Sbjct: 526 LLGCPVDIS 534




88|Sequence|436|445|VDLTYTYDHL

>sp|RDRP_PVXHB|RNA replication protein|Potato virus X (strain HB)

Query: 1 VDLTYTYDH 9
+DL+Y YDH
Sbjct: 1408 IDLSYAYDH 1416


>sp|RDRP_PVXCP|RNA replication protein|Potato virus X (strain CP)

Query: 1 VDLTYTYDH 9
+DL+Y YDH
Sbjct: 1408 IDLSYAYDH 1416


>sp|RDRP_PVX|RNA replication protein|Potato virus X (PVX)

Query: 1 VDLTYTYDH 9
+DL+Y YDH
Sbjct: 1408 IDLSYAYDH 1416


>sp|RDRP_PVXX3|RNA replication protein|Potato virus X (strain X3)

Query: 1 VDLTYTYDH 9
+DL+Y YDH
Sbjct: 1408 IDLSYAYDH 1416


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 947 TYVYDHL 953


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 947 TYVYDHL 953


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 947 TYVYDHL 953


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 947 TYVYDHL 953


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 947 TYVYDHL 953


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 948 TYIYDHL 954


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 949 TYIYDHL 955


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 945 TYIYDHL 951


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 951 TYIYDHL 957


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 952 TYIYDHL 958


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 948 TYIYDHL 954


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 951 TYIYDHL 957


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 951 TYIYDHL 957


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 951 TYIYDHL 957


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 951 TYIYDHL 957


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 951 TYIYDHL 957


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 948 TYIYDHL 954


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 947 TYIYDHL 953


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 951 TYIYDHL 957


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 955 TYLYDHL 961


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 953 TYLYDHL 959


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 953 TYLYDHL 959


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 4 TYTYDHL 10
TY YDHL
Sbjct: 952 TYLYDHL 958


>sp|GB_SHV1|ENVELOPE glycoprotein B|Saimiriine herpesvirus 1 (strain MV-5-4-PSL)

Query: 3 LTYTYDHL 10
L +TYDH+
Sbjct: 515 LQFTYDHI 522


>sp|GB_HSVA1|ENVELOPE glycoprotein B|Herpesvirus ateles type 1 (strain

Query: 3 LTYTYDHL 10
L +TYDH+
Sbjct: 529 LQFTYDHI 536


>sp|GB_BHV1C|ENVELOPE glycoprotein B|Bovine herpesvirus 1.1 (strain Cooper)

Query: 3 LTYTYDHL 10
L +TYDH+
Sbjct: 540 LQFTYDHI 547


>sp|GB_SUHVF|ENVELOPE glycoprotein B|Suid herpesvirus 1 (strain Indiana-Funkhauser

Query: 3 LTYTYDHL 10
L +TYDH+
Sbjct: 533 LQFTYDHI 540


>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2

Query: 3 LTYTYDHL 10
L +TYDH+
Sbjct: 491 LQFTYDHI 498


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 4 TYTYDH 9
T+TYDH
Sbjct: 2817 TWTYDH 2822


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 1 VDLTYTYDH 9
V +TYT DH
Sbjct: 1073 VPMTYTKDH 1081


>sp|NCAP_BC512|NUCLEOPROTEIN coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 VDLTYTYDHL 10
V++TYTY L
Sbjct: 307 VEITYTYKML 316


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 TYTYDHL 10
TY Y+HL
Sbjct: 947 TYVYNHL 953


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 TYTYDHL 10
TY Y+HL
Sbjct: 947 TYVYNHL 953


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4 TYTYDHL 10
TY Y+HL
Sbjct: 947 TYVYNHL 953


>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)

Query: 3 LTYTYDHL 10
L +TYDH+
Sbjct: 517 LQFTYDHI 524


>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 LTYTYDHL 10
L +TYDH+
Sbjct: 517 LQFTYDHI 524


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4 TYTYDHL 10
TY Y+HL
Sbjct: 947 TYIYNHL 953


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4 TYTYDHL 10
TY Y+HL
Sbjct: 947 TYIYNHL 953


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 TYTYDHL 10
TY Y+HL
Sbjct: 947 TYIYNHL 953


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 DLTYTY 7
D+TYTY
Sbjct: 278 DITYTY 283


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2 DLTYTY 7
D+TYTY
Sbjct: 278 DITYTY 283


>sp|PORTL_BPTWO|PROBABLE portal protein|Staphylococcus phage Twort (strain DSM

Query: 4 TYTYDHL 10
TYTYD +
Sbjct: 174 TYTYDQV 180


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 2 DLTYTYDH 9
DL+ +YDH
Sbjct: 1182 DLSCSYDH 1189


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 2 DLTYTYDH 9
DL+ +YDH
Sbjct: 1181 DLSCSYDH 1188


>sp|NCAP_CVHNL|NUCLEOPROTEIN coronavirus NL63 (HCoV-NL63)

Query: 1 VDLTYTYDHL 10
V +TYTY L
Sbjct: 302 VQITYTYKML 311


>sp|RDRP_ESRV9|RNA-DIRECTED RNA polymerase|Eriocheir sinensis reovirus (isolate China/905)

Query: 2 DLTYTYDHL 10
D++Y+YD+L
Sbjct: 88 DVSYSYDNL 96


>sp|IKBG1_MDBVW|I-KAPPA-B like protein G1|Microplitis demolitor bracovirus (isolate Webb)

Query: 1 VDLTYTYDH 9
+DL + YDH
Sbjct: 47 LDLLFQYDH 55


>sp|PRIM_GAHVM|DNA primase|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 3 LTYTYDHL 10
+TY Y+H+
Sbjct: 965 ITYVYEHI 972


>sp|DPOL1_BPK31|DEPOLYMERASE 1, capsule KN3-specific|Klebsiella phage KN3-1 (Bacteriophage

Query: 2 DLTYTYDHL 10
+ TY +DHL
Sbjct: 334 NTTYLFDHL 342




89|Sequence|441|450|TYDHLGDSPK

>sp|VP5_AQRVG|MICROTUBULE-ASSOCIATED protein VP5|Aquareovirus G (isolate American grass

Query: 3 DHLGDS 8
DHLGDS
Sbjct: 440 DHLGDS 445


>sp|POL2_ARMVN|RNA2 polyprotein|Arabis mosaic virus (isolate NW)

Query: 4 HLGDSP 9
HLGD+P
Sbjct: 986 HLGDNP 991


>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 DHLGDSPK 10
D LGDSP+
Sbjct: 454 DPLGDSPQ 461


>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 DHLGDSPK 10
D LGDSP+
Sbjct: 454 DPLGDSPQ 461


>sp|TERS_BP80A|TERMINASE small subunit|Staphylococcus phage 80alpha

Query: 2 YDHLGD 7
YDHL D
Sbjct: 88 YDHLND 93




90|Sequence|446|455|GDSPKILQDI

>sp|VF205_IIV3|PUTATIVE DNA ligase 052L|Invertebrate iridescent virus 3 (IIV-3)

Query: 4 PKILQDI 10
PKILQDI
Sbjct: 225 PKILQDI 231


>sp|RFCS1_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GDSPKILQDI 10
DS KI++DI
Sbjct: 139 NDSSKIIEDI 148




91|Sequence|451|460|ILQDIASGSH

>sp|VG48_ALHV1|UNCHARACTERIZED gene 48 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 ILQDIASGSH 10
+L+DI GSH
Sbjct: 173 LLRDIVMGSH 182


>sp|VG66_BPML5|GENE 66 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 ILQDIASGS 9
IL DI+SGS
Sbjct: 50 ILGDISSGS 58




92|Sequence|456|465|ASGSHPFSQV

>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 3 GSHPFSQV 10
G+HPFS++
Sbjct: 878 GTHPFSRI 885


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3 GSHPFSQV 10
G+HPFS++
Sbjct: 878 GTHPFSRI 885


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 3 GSHPFSQV 10
G+HPFS++
Sbjct: 878 GTHPFSRI 885


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 3 GSHPFSQV 10
G+HPFS++
Sbjct: 878 GTHPFSRI 885


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 3 GSHPFSQV 10
G+HPFS++
Sbjct: 878 GTHPFSRI 885


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3 GSHPFSQV 10
G+HPFS++
Sbjct: 878 GTHPFSRI 885


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 3 GSHPFSQV 10
G+HPFS++
Sbjct: 878 GTHPFSRI 885


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 3 GSHPFSQV 10
G+HPFS++
Sbjct: 878 GTHPFSRI 885


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 3 GSHPFSQV 10
G+HPFS++
Sbjct: 878 GTHPFSRI 885


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 3 GSHPFSQV 10
G+HPFS++
Sbjct: 878 GTHPFSRI 885


>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)

Query: 2 SGSHPF 7
SG+HPF
Sbjct: 496 SGAHPF 501


>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)

Query: 2 SGSHPF 7
SG+HPF
Sbjct: 496 SGAHPF 501


>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann

Query: 2 SGSHPF 7
SG+HPF
Sbjct: 496 SGAHPF 501


>sp|Y040_OSHVF|UNCHARACTERIZED protein ORF40|Ostreid herpesvirus 1 (isolate France)

Query: 4 SHPFSQ 9
SHPFS+
Sbjct: 226 SHPFSE 231


>sp|RMIL_AVEVR|SERINE/THREONINE-PROTEIN kinase-transforming protein Rmil|Avian rous-associated virus type 1

Query: 2 SGSHPFSQV 10
SGSH F Q+
Sbjct: 231 SGSHQFEQL 239


>sp|RMIL_AVII1|SERINE/THREONINE-PROTEIN kinase-transforming protein Rmil|Avian retrovirus IC10

Query: 2 SGSHPFSQV 10
SGSH F Q+
Sbjct: 215 SGSHQFEQL 223




93|Sequence|461|470|PFSQVLKEAK

>sp|REPA_BPPHS|REPLICATION-ASSOCIATED protein A|Enterobacteria phage phiX174 (Isolate Sanger)

Query: 1 PFSQVLKE 8
PF+Q+LK+
Sbjct: 417 PFNQILKQ 424


>sp|VGA_BPS13|A' protein|Enterobacteria phage S13 (Bacteriophage S13)

Query: 1 PFSQVLKE 8
PF+Q+LK+
Sbjct: 426 PFNQILKQ 433




94|Sequence|466|475|LKEAKKPMVV

***** No hits found ******


95|Sequence|471|480|KPMVVLGSSA

>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 1 KPMVVLGSS 9
+PMVVLG S
Sbjct: 977 RPMVVLGIS 985


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 KPMVVLGSS 9
+PMVVLG S
Sbjct: 977 RPMVVLGIS 985


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 1 KPMVVLGSS 9
+PMVVLG S
Sbjct: 976 RPMVVLGLS 984


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1 KPMVVLGSS 9
+PMVVLG S
Sbjct: 976 RPMVVLGLS 984


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 1 KPMVVLGSS 9
+PMVVLG S
Sbjct: 976 RPMVVLGLS 984


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 1 KPMVVLGSS 9
+PMVVLG S
Sbjct: 976 RPMVVLGLS 984


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 1 KPMVVLGSS 9
+PMVVLG S
Sbjct: 976 RPMVVLGLS 984


>sp|DNBI_BHV2B|MAJOR DNA-binding protein|Bovine herpesvirus 2 (strain BMV)

Query: 1 KPMVVLGSS 9
+PMVVLG S
Sbjct: 972 RPMVVLGLS 980


>sp|DNBI_EHV1|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain HVS25A)

Query: 1 KPMVVLGSS 9
+PMVV+G S
Sbjct: 151 RPMVVIGLS 159


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 3 MVVLGSSA 10
MVVLGS+A
Sbjct: 2434 MVVLGSAA 2441


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 3 MVVLGSSA 10
MVVLGS+A
Sbjct: 2445 MVVLGSAA 2452


>sp|DNBI_EHV1B|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 KPMVVLGSS 9
+PMVV+G S
Sbjct: 985 RPMVVIGLS 993


>sp|DNBI_EHV1V|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain V592)

Query: 1 KPMVVLGSS 9
+PMVV+G S
Sbjct: 985 RPMVVIGLS 993




96|Sequence|476|485|LGSSALQRND

>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2 GSSALQRND 10
GS+ALQR D
Sbjct: 1727 GSTALQRMD 1735




97|Sequence|481|490|LQRNDGAAIL

>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1 LQRNDGA 7
L+RNDGA
Sbjct: 2679 LERNDGA 2685


>sp|PORTL_BPT4|PORTAL protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 LQRNDGAAI 9
LQR DG A+
Sbjct: 336 LQRRDGKAV 344


>sp|CAPSD_AMCV|CAPSID protein|Artichoke mottled crinkle virus (AMCV)

Query: 3 RNDGAAIL 10
RN+GAAI+
Sbjct: 37 RNNGAAIV 44


>sp|DNAPR_BPT4|TERMINAL DNA protecting protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 RNDGAAI 9
RN+GAAI
Sbjct: 107 RNEGAAI 113




98|Sequence|486|495|GAAILAAVSS

***** No hits found ******


99|Sequence|491|500|AAVSSIAQKI

***** No hits found ******


100|Sequence|496|505|IAQKIRMTSG

***** No hits found ******


101|Sequence|501|510|RMTSGVTGDW

>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 MTSGVTGDW 10
M G+T DW
Sbjct: 1767 MKKGITDDW 1775


>sp|NCAP_BEFVB|NUCLEOPROTEIN ephemeral fever virus (strain

Query: 1 RMTSGVTGDW 10
R+T + GDW
Sbjct: 78 RITEKLEGDW 87


>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9

Query: 2 MTSGVTGDW 10
M SG+ DW
Sbjct: 405 MNSGILEDW 413


>sp|RIR2_FRG3G|PUTATIVE ribonucleoside-diphosphate reductase small subunit|Frog virus 3

Query: 3 TSGVTGDW 10
T G+TG W
Sbjct: 373 TGGLTGSW 380


>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15

Query: 2 MTSGVTGDW 10
M SG+ DW
Sbjct: 405 MNSGILEDW 413


>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17

Query: 2 MTSGVTGDW 10
M SG+ DW
Sbjct: 405 MNSGILEDW 413


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 1 RMTSGVTGDW 10
R+T+GV +W
Sbjct: 1728 RVTAGVAQEW 1737


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 1 RMTSGVTGDW 10
R+T+GV +W
Sbjct: 1728 RVTAGVAQEW 1737


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 1 RMTSGVTGDW 10
R+T+GV +W
Sbjct: 1728 RVTAGVAQEW 1737


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 1 RMTSGVTGDW 10
R+T+GV +W
Sbjct: 1728 RVTAGVAQEW 1737


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 3 TSGVTGD 9
TSG+TGD
Sbjct: 2357 TSGITGD 2363


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 1 RMTSGVTGDW 10
R+T+GV +W
Sbjct: 1728 RVTAGVAQEW 1737


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 1 RMTSGVTGDW 10
R+T+GV +W
Sbjct: 1728 RVTAGVAQEW 1737


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 1 RMTSGVTGDW 10
R+T+GV +W
Sbjct: 1728 RVTAGVAQEW 1737


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 1 RMTSGVTGDW 10
R+T+GV +W
Sbjct: 1728 RVTAGVAQEW 1737


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 TSGVTGD 9
TSG+TGD
Sbjct: 2357 TSGITGD 2363


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 3 TSGVTGD 9
TSG+TGD
Sbjct: 2357 TSGITGD 2363


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 1 RMTSGVTGDW 10
R+T+GV +W
Sbjct: 1728 RVTAGVAQEW 1737


>sp|ORF7_SPV1C|UNCHARACTERIZED protein ORF7|Spiroplasma virus SpV1-C74 (SpV1)

Query: 2 MTSGVTGDW 10
MT G+TG W
Sbjct: 21 MTEGMTGIW 29


>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57

Query: 2 MTSGVTGDW 10
+T GVTG W
Sbjct: 178 LTYGVTGTW 186


>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27

Query: 2 MTSGVTGDW 10
+T GVTG W
Sbjct: 178 LTYGVTGTW 186


>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a

Query: 2 MTSGVTGDW 10
+T GVTG W
Sbjct: 178 LTYGVTGTW 186


>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32

Query: 5 GVTGDW 10
GVTG W
Sbjct: 180 GVTGQW 185




102|Sequence|506|515|VTGDWKVMNI

>sp|HN_SV41|HEMAGGLUTININ-NEURAMINIDASE virus 41 (SV41)

Query: 1 VTGDWKVMN 9
VTG+W +N
Sbjct: 281 VTGNWATLN 289


>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 VTGDWKVM 8
+ GDWK M
Sbjct: 188 LNGDWKAM 195


>sp|POL_FIVPE|POL polyprotein|Feline immunodeficiency virus (isolate Petaluma)

Query: 2 TGDWKVMNI 10
TG W+VM++
Sbjct: 618 TGKWRVMDL 626


>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61

Query: 2 TGDWKVM 8
TGDWK +
Sbjct: 435 TGDWKAI 441


>sp|VE1_BPV6|REPLICATION protein E1|Bos taurus papillomavirus 6 (Bovine

Query: 2 TGDWK 6
TGDWK
Sbjct: 397 TGDWK 401


>sp|VE1_BPV3|REPLICATION protein E1|Bovine papillomavirus type 3

Query: 2 TGDWK 6
TGDWK
Sbjct: 401 TGDWK 405


>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1

Query: 3 GDWKVM 8
GDWK++
Sbjct: 198 GDWKIL 203


>sp|VE1_CRPVK|REPLICATION protein E1|Cottontail rabbit papillomavirus (strain Kansas)

Query: 3 GDWKVM 8
GDWKV+
Sbjct: 391 GDWKVV 396


>sp|ENLYS_BPDPK|ENDOLYSIN gp144|Pseudomonas phage phiKZ

Query: 1 VTGDWKVM 8
+TG WK M
Sbjct: 136 LTGTWKTM 143


>sp|TMP_BPHA1|PROBABLE tape measure protein|Halomonas phage phiHAP-1 (isolate -/Gulf

Query: 3 GDWKVMNI 10
G WK+M++
Sbjct: 817 GRWKIMSV 824


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 VTGDW 5
VTGDW
Sbjct: 942 VTGDW 946


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 VTGDW 5
VTGDW
Sbjct: 942 VTGDW 946


>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus

Query: 2 TGDWK 6
TGDWK
Sbjct: 27 TGDWK 31


>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 GDWKVMN 9
G+W +MN
Sbjct: 391 GEWPIMN 397


>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32

Query: 1 VTGDWKV 7
VTG W+V
Sbjct: 181 VTGQWEV 187


>sp|CAPS1_AFV1Y|MAJOR capsid protein 1|Acidianus filamentous virus 1 (isolate

Query: 1 VTGDWKVMN 9
+T DWK N
Sbjct: 42 ITADWKQYN 50




103|Sequence|511|520|KVMNILHRIA

>sp|VP2_AHSV|OUTER capsid protein VP2|African horse sickness virus (AHSV)

Query: 2 VMNILHRI 9
+MN LHR+
Sbjct: 835 MMNFLHRV 842


>sp|ICP27_SHV21|MRNA export factor ICP27 homolog|Saimiriine herpesvirus 2 (strain 11)

Query: 2 VMNILH 7
VMNILH
Sbjct: 374 VMNILH 379




104|Sequence|516|525|LHRIASQVAA

***** No hits found ******


105|Sequence|521|530|SQVAALDLGY

***** No hits found ******


106|Sequence|526|535|LDLGYKPGVE

>sp|V127_FOWPV|PROTEIN FPV127|Fowlpox virus (FPV)

Query: 3 LGYKPGVE 10
+GYKPG E
Sbjct: 43 IGYKPGPE 50


>sp|V127_FOWPN|PROTEIN FPV127|Fowlpox virus (strain NVSL) (FPV)

Query: 3 LGYKPGVE 10
+GYKPG E
Sbjct: 43 IGYKPGPE 50


>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 LDLGYKPGVE 10
+DLG PGV+
Sbjct: 43 IDLGLPPGVQ 52


>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 LDLGYKPGVE 10
+DLG PGV+
Sbjct: 43 IDLGLPPGVQ 52


>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 LDLGYKPGVE 10
+DLG PGV+
Sbjct: 43 IDLGLPPGVQ 52


>sp|POLG_CILVC|RNA replication protein|Citrus leprosis virus C (isolate

Query: 2 DLGYKP 7
D+GYKP
Sbjct: 2002 DIGYKP 2007


>sp|TEG7_HHV8P|TEGUMENT protein ORF55|Human herpesvirus 8 type P

Query: 1 LDLGYKPGV 9
+DLG PGV
Sbjct: 41 IDLGLPPGV 49


>sp|RDRP_WCCVB|RNA-DIRECTED RNA polymerase|White clover cryptic virus 1

Query: 2 DLGYKP 7
DLGY+P
Sbjct: 550 DLGYRP 555


>sp|FIBP_BPT4|LONG-TAIL fiber proximal subunit|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 DLGYKPGV 9
D+G KPGV
Sbjct: 140 DIGGKPGV 147


>sp|YL242_MIMIV|UNCHARACTERIZED protein L242|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 LGYKPGV 9
+GY+PGV
Sbjct: 56 IGYEPGV 62


>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 5 YKPGVE 10
YKPGV+
Sbjct: 1961 YKPGVQ 1966


>sp|TEG7_EHV2|TEGUMENT protein UL51 homolog|Equine herpesvirus 2 (strain 86/87)

Query: 1 LDLGYKPGV 9
+D+G PGV
Sbjct: 41 IDMGLPPGV 49


>sp|NS1AB_OASV1|NON-STRUCTURAL polyprotein 1AB|Ovine astrovirus 1 (OAstV-1)

Query: 2 DLGYKPGV 9
DLG++P V
Sbjct: 898 DLGFEPAV 905


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 3 LGYKPGVE 10
LGY P VE
Sbjct: 1446 LGYLPSVE 1453


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 3 LGYKPGVE 10
LGY P VE
Sbjct: 1492 LGYLPSVE 1499


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 3 LGYKPGVE 10
LGY P VE
Sbjct: 1446 LGYLPSVE 1453


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 3 LGYKPGVE 10
LGY P VE
Sbjct: 1492 LGYLPSVE 1499


>sp|NS1_AEDEV|INITIATOR protein NS1|Aedes densonucleosis virus (strain GKV

Query: 1 LDLGYKPGVE 10
LDLG G+E
Sbjct: 92 LDLGASTGIE 101


>sp|TMP_BPHC1|PROBABLE tape measure protein|Haemophilus phage HP1 (strain HP1c1)

Query: 1 LDLGYKPGV 9
+DLGY GV
Sbjct: 501 IDLGYALGV 509


>sp|Y023_OSHVF|UNCHARACTERIZED protein ORF23|Ostreid herpesvirus 1 (isolate France)

Query: 3 LGYKPGVE 10
L Y PGVE
Sbjct: 148 LSYLPGVE 155


>sp|PCPP_BPT4|PROHEAD core protein protease|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 DLGYKPGV 9
DLG KPG+
Sbjct: 31 DLGLKPGL 38


>sp|PHOSP_SVCV|PHOSPHOPROTEIN viremia of carp virus

Query: 1 LDLGYKPGV 9
+D+G+ PG+
Sbjct: 109 IDIGFGPGI 117




107|Sequence|531|540|KPGVEAIRKN

>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 1 KPGVEAIRK 9
KPG + I+K
Sbjct: 432 KPGTQTIKK 440


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 KPGVEAIRK 9
KPG + I+K
Sbjct: 432 KPGTQTIKK 440




108|Sequence|536|545|AIRKNPPKVL

>sp|Y330_ATV|PUTATIVE acetyltransferase ORF330|Acidianus two-tailed virus (ATV)

Query: 5 NPPKVL 10
NPPKVL
Sbjct: 268 NPPKVL 273


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 AIRKNPPKVL 10
I KNPP +L
Sbjct: 1132 GINKNPPSIL 1141


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 1 AIRKNPPKVL 10
I KNPP +L
Sbjct: 1132 GINKNPPSIL 1141


>sp|V_PHODV|NON-STRUCTURAL protein V|Phocine distemper virus (PDV)

Query: 1 AIRKNPPKV 9
A+R+NPP +
Sbjct: 18 ALRENPPNM 26


>sp|PHOSP_CDVO|PHOSPHOPROTEIN distemper virus (strain Onderstepoort)

Query: 1 AIRKNPPKV 9
A+R+NPP +
Sbjct: 18 ALRENPPDI 26


>sp|L_TACVF|RNA-DIRECTED RNA polymerase L|Tacaribe virus (strain Franze-Fernandez) (TCRV)

Query: 1 AIRKNPPKVL 10
+IRKN PK+
Sbjct: 1738 SIRKNYPKLF 1747


>sp|VG67_ICHVA|UNCHARACTERIZED protein ORF67|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 RKNPPKVL 10
R+NPP+++
Sbjct: 496 RRNPPRII 503


>sp|PHOSP_PHODV|PHOSPHOPROTEIN distemper virus (PDV)

Query: 1 AIRKNPPKV 9
A+R+NPP +
Sbjct: 18 ALRENPPNM 26


>sp|CAPSD_MCMVK|CAPSID protein|Maize chlorotic mottle virus (isolate

Query: 1 AIRKNPP 7
AIR NPP
Sbjct: 24 AIRANPP 30


>sp|UBC3_MIMIV|PROBABLE ubiquitin-conjugating enzyme E2 R521|Acanthamoeba polyphaga

Query: 4 KNPPKVL 10
KNPPK +
Sbjct: 710 KNPPKTI 716




109|Sequence|541|550|PPKVLFLLGA

***** No hits found ******


110|Sequence|546|555|FLLGADGGCI

>sp|US36_HCMVA|UNCHARACTERIZED protein US36|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 FLLGADGGC 9
F+LGAD C
Sbjct: 35 FILGADSAC 43


>sp|UL32_EHV1B|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 2 LLGADGGC 9
++G DGGC
Sbjct: 9 VIGEDGGC 16


>sp|UL32_EHV1A|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain AB1)

Query: 2 LLGADGGC 9
++G DGGC
Sbjct: 9 VIGEDGGC 16


>sp|CAPSD_BPBMU|MAJOR capsid protein|Burkholderia phage BcepMu (isolate -/United

Query: 1 FLLGADGG 8
+LLGAD G
Sbjct: 292 YLLGADAG 299


>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1

Query: 1 FLLGADG 7
FL+GADG
Sbjct: 182 FLVGADG 188


>sp|POLG_TMEVD|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 LLGADGGC 9
LLG DG C
Sbjct: 1083 LLGIDGDC 1090


>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 LLGADGGC 9
LLG DG C
Sbjct: 1085 LLGIDGDC 1092


>sp|DPOL_OSHVF|DNA polymerase|Ostreid herpesvirus 1 (isolate France)

Query: 2 LLGADGGC 9
LLG DG C
Sbjct: 46 LLGMDGHC 53


>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 LGADGGCI 10
LG DG C+
Sbjct: 456 LGTDGHCV 463


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 1 FLLGADGGC 9
FLL GGC
Sbjct: 474 FLLWEQGGC 482


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 1 FLLGADGGC 9
FLL GGC
Sbjct: 474 FLLWEQGGC 482


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 6 DGGCI 10
DGGCI
Sbjct: 3098 DGGCI 3102


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 6 DGGCI 10
DGGCI
Sbjct: 3096 DGGCI 3100


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 6 DGGCI 10
DGGCI
Sbjct: 3098 DGGCI 3102


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 6 DGGCI 10
DGGCI
Sbjct: 3098 DGGCI 3102


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 6 DGGCI 10
DGGCI
Sbjct: 3098 DGGCI 3102


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 6 DGGCI 10
DGGCI
Sbjct: 3098 DGGCI 3102


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 5 ADGGC 9
ADGGC
Sbjct: 1305 ADGGC 1309


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 5 ADGGC 9
ADGGC
Sbjct: 1301 ADGGC 1305


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 5 ADGGC 9
ADGGC
Sbjct: 1303 ADGGC 1307


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 5 ADGGC 9
ADGGC
Sbjct: 1307 ADGGC 1311


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 5 ADGGC 9
ADGGC
Sbjct: 1305 ADGGC 1309


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 5 ADGGC 9
ADGGC
Sbjct: 1305 ADGGC 1309


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 ADGGC 9
ADGGC
Sbjct: 1301 ADGGC 1305


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 5 ADGGC 9
ADGGC
Sbjct: 1302 ADGGC 1306


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 5 ADGGC 9
ADGGC
Sbjct: 1309 ADGGC 1313


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 ADGGC 9
ADGGC
Sbjct: 1301 ADGGC 1305


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 5 ADGGC 9
ADGGC
Sbjct: 1305 ADGGC 1309


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 ADGGC 9
ADGGC
Sbjct: 1301 ADGGC 1305


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 ADGGC 9
ADGGC
Sbjct: 1301 ADGGC 1305


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 5 ADGGC 9
ADGGC
Sbjct: 1305 ADGGC 1309


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 5 ADGGC 9
ADGGC
Sbjct: 1306 ADGGC 1310


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 5 ADGGC 9
ADGGC
Sbjct: 1301 ADGGC 1305


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 5 ADGGC 9
ADGGC
Sbjct: 1305 ADGGC 1309


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 ADGGC 9
ADGGC
Sbjct: 1301 ADGGC 1305


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 ADGGC 9
ADGGC
Sbjct: 1301 ADGGC 1305


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 5 ADGGC 9
ADGGC
Sbjct: 1306 ADGGC 1310


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 5 ADGGC 9
ADGGC
Sbjct: 1299 ADGGC 1303


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 ADGGC 9
ADGGC
Sbjct: 1301 ADGGC 1305


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 5 ADGGC 9
ADGGC
Sbjct: 1305 ADGGC 1309


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 5 ADGGC 9
ADGGC
Sbjct: 1306 ADGGC 1310


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 5 ADGGC 9
ADGGC
Sbjct: 1305 ADGGC 1309


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 5 ADGGC 9
ADGGC
Sbjct: 1301 ADGGC 1305


>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 1 FLLGADGGC 9
FLL GGC
Sbjct: 338 FLLWEHGGC 346


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 5 ADGGC 9
ADGGC
Sbjct: 1302 ADGGC 1306


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 5 ADGGC 9
ADGGC
Sbjct: 1301 ADGGC 1305


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 5 ADGGC 9
ADGGC
Sbjct: 1302 ADGGC 1306


>sp|COLL2_MIMIV|COLLAGEN-LIKE protein 2|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FLLGADGGCI 10
F+ G DGG +
Sbjct: 1454 FIKGGDGGTV 1463


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 ADGGC 9
ADGGC
Sbjct: 1301 ADGGC 1305


>sp|TSP_BPKVM|TAIL sheath protein|Vibrio phage KVP40 (isolate Vibrio

Query: 1 FLLGADGGCI 10
+ +GA GC+
Sbjct: 101 YTIGASNGCV 110




111|Sequence|551|560|DGGCITRQDL

>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 DGGCITRQDL 10
+GGCIT +++
Sbjct: 4547 EGGCITSREV 4556


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1 DGGC----ITRQD 9
DGGC ITR+D
Sbjct: 3098 DGGCIMDVITRRD 3110


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1 DGGC----ITRQD 9
DGGC ITR+D
Sbjct: 3098 DGGCIMDVITRRD 3110


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1 DGGC----ITRQD 9
DGGC ITR+D
Sbjct: 3098 DGGCIMDVITRRD 3110


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 DGGC----ITRQD 9
DGGC ITR+D
Sbjct: 3098 DGGCIMDVITRRD 3110


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1 DGGC----ITRQD 9
DGGC ITR+D
Sbjct: 3098 DGGCIMDVITRRD 3110


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 DGGCITRQDL 10
+GGCIT +++
Sbjct: 4579 EGGCITAKEV 4588


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 DGGCITRQDL 10
+GGCIT +++
Sbjct: 4590 EGGCITAKEV 4599


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 DGGCITRQDL 10
DGGCI +++
Sbjct: 4504 DGGCINAREV 4513


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 DGGCITRQDL 10
DGGCI +++
Sbjct: 4479 DGGCINAREV 4488


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1 DGGC----ITRQD 9
DGGC ITR+D
Sbjct: 3096 DGGCIMDVITRRD 3108


>sp|PG159_VARV|PROTEIN OPG159|Variola virus

Query: 2 GGCITRQDL 10
GGCI DL
Sbjct: 53 GGCIYHDDL 61


>sp|PG159_VAR67|PROTEIN OPG159|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 GGCITRQDL 10
GGCI DL
Sbjct: 53 GGCIYHDDL 61


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 DGGCI 5
DGGCI
Sbjct: 4876 DGGCI 4880


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 DGGCI 5
DGGCI
Sbjct: 4853 DGGCI 4857


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 DGGCI 5
DGGCI
Sbjct: 4882 DGGCI 4886


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 DGGCI 5
DGGCI
Sbjct: 4849 DGGCI 4853


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 DGGCI 5
DGGCI
Sbjct: 4887 DGGCI 4891


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 DGGCI 5
DGGCI
Sbjct: 4849 DGGCI 4853


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 DGGCI 5
DGGCI
Sbjct: 4849 DGGCI 4853


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 DGGCI 5
DGGCI
Sbjct: 4849 DGGCI 4853


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 DGGCI 5
DGGCI
Sbjct: 4849 DGGCI 4853


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 DGGCI 5
DGGCI
Sbjct: 4851 DGGCI 4855


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 DGGCI 5
DGGCI
Sbjct: 4847 DGGCI 4851


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 DGGCI 5
DGGCI
Sbjct: 4859 DGGCI 4863


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 DGGCI 5
DGGCI
Sbjct: 4907 DGGCI 4911


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 DGGCI 5
DGGCI
Sbjct: 4937 DGGCI 4941


>sp|VE6_PAPVE|PROTEIN E6|European elk papillomavirus (EEPV)

Query: 2 GGCITRQD 9
GGC+TR +
Sbjct: 87 GGCLTRDE 94




112|Sequence|556|565|TRQDLPKDCF

>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 1 TRQDLPKDC 9
TR ++PK C
Sbjct: 1570 TRYEIPKSC 1578


>sp|RIR1_IIV3|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 TRQDLPKDCF 10
T+Q LP CF
Sbjct: 75 TKQGLPIACF 84


>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1 TRQDLPKDC 9
+R D+PK C
Sbjct: 288 SRGDIPKAC 296


>sp|PHOSP_RINDK|PHOSPHOPROTEIN virus (strain Kabete O)

Query: 3 QDLPKDCF 10
QD+ K CF
Sbjct: 58 QDISKPCF 65


>sp|YR450_MIMIV|UNCHARACTERIZED protein R450|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 RQDLPKD 8
R D+PKD
Sbjct: 131 RNDIPKD 137


>sp|PHOSP_RINDR|PHOSPHOPROTEIN virus (strain RBOK) (RDV)

Query: 3 QDLPKDCF 10
QD+ K CF
Sbjct: 58 QDISKPCF 65




113|Sequence|561|570|PKDCFIIYQG

>sp|VP03_EHV2|PROBABLE membrane antigen 3|Equine herpesvirus 2 (strain 86/87)

Query: 1 PKDCFIIYQ 9
P DCF+I++
Sbjct: 706 PDDCFLIHE 714


>sp|SPIKE_FIPV|SPIKE glycoprotein|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 PKDCFIIYQG 10
P+ C+++Y G
Sbjct: 400 PRYCYVLYNG 409


>sp|SPIKE_CVPMI|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 PKDCFIIYQG 10
P+ C+++Y G
Sbjct: 397 PRYCYVLYNG 406


>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 PKDCFIIYQG 10
P+ C+++Y G
Sbjct: 397 PRYCYVLYNG 406


>sp|SPIKE_CVPRM|SPIKE glycoprotein|Porcine respiratory coronavirus (strain RM4)

Query: 1 PKDCFIIYQG 10
P+ C+++Y G
Sbjct: 173 PRYCYVLYNG 182


>sp|SPIKE_CVPR8|SPIKE glycoprotein|Porcine respiratory coronavirus (strain 86/137004

Query: 1 PKDCFIIYQG 10
P+ C+++Y G
Sbjct: 173 PRYCYVLYNG 182


>sp|SPIKE_CVCBG|SPIKE glycoprotein|Canine coronavirus (strain BGF10) (CCoV)

Query: 1 PKDCFIIYQG 10
P+ C+++Y G
Sbjct: 401 PRYCYVLYNG 410


>sp|SPIKE_CVCAI|SPIKE glycoprotein|Canine coronavirus (strain Insavc-1) (CCoV)

Query: 1 PKDCFIIYQG 10
P+ C+++Y G
Sbjct: 401 PRYCYVLYNG 410


>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 1 PKDCFIIYQG 10
PK CFI +G
Sbjct: 2311 PKPCFITLKG 2320


>sp|SPIKE_CVCAK|SPIKE glycoprotein|Canine coronavirus (strain K378) (CCoV)

Query: 1 PKDCFIIYQG 10
P+ CF +Y G
Sbjct: 401 PRYCFALYNG 410


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 PKDCFIIYQG 10
PK C I+QG
Sbjct: 2053 PKTCMNIWQG 2062


>sp|POL_COYMV|POLYPROTEIN P3|Commelina yellow mottle virus (CoYMV)

Query: 1 PKDCFIIYQ 9
PKD FII +
Sbjct: 1705 PKDSFIIIE 1713


>sp|PG055_VARV|PROTEIN OPG055|Variola virus

Query: 1 PKDCFII 7
P DCF++
Sbjct: 117 PADCFLV 123


>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 PKDCFII 7
P DCF++
Sbjct: 117 PADCFLV 123


>sp|PG055_VACCW|PROTEIN OPG055|Vaccinia virus (strain Western Reserve)

Query: 1 PKDCFII 7
P DCF++
Sbjct: 117 PADCFLV 123


>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 PKDCFII 7
P DCF++
Sbjct: 114 PADCFLV 120


>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 PKDCFII 7
P DCF++
Sbjct: 117 PADCFLV 123


>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)

Query: 1 PKDCFII 7
P DCF++
Sbjct: 117 PADCFLV 123


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 PKDCFIIYQG 10
PK C ++QG
Sbjct: 2053 PKTCLNLWQG 2062


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 PKDCFIIYQG 10
PK C ++QG
Sbjct: 2053 PKTCLNMWQG 2062


>sp|U15_HHV6U|UNCHARACTERIZED protein U15|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 DCFIIYQ 9
DCFI+ Q
Sbjct: 92 DCFIVAQ 98


>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 1 PKDCFIIYQG 10
PK C +Y G
Sbjct: 1575 PKSCMQLYAG 1584


>sp|RDRP_SSDRV|RNA replication protein|Sclerotinia sclerotiorum debilitation-associated

Query: 1 PKDCFII 7
PKDC ++
Sbjct: 1027 PKDCVVL 1033


>sp|POL1_CPSMV|RNA1 polyprotein|Cowpea severe mosaic virus (strain

Query: 1 PKDCFIIY 8
PK+C II+
Sbjct: 1851 PKECDIIF 1858


>sp|MCP_SUHVS|MAJOR capsid protein|Suid herpesvirus 1 (strain Indiana

Query: 1 PKDCFIIYQ 9
P+DC +Y+
Sbjct: 659 PEDCAAVYK 667


>sp|YR125_MIMIV|UNCHARACTERIZED Bro-N domain-containing protein R125|Acanthamoeba polyphaga

Query: 1 PKDCFIIYQG 10
PK FI Y+G
Sbjct: 122 PKTIFIRYEG 131


>sp|SPIKE_CVPRT|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 PKDCFIIYQG 10
P+ C++ Y G
Sbjct: 395 PRYCYVHYNG 404


>sp|SPIKE_CVPPU|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 PKDCFIIYQG 10
P+ C++ Y G
Sbjct: 395 PRYCYVHYNG 404


>sp|VF282_IIV3|PUTATIVE transcription factor 079L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 KDCFIIYQG 10
+DC YQG
Sbjct: 214 RDCITQYQG 222


>sp|YR424_MIMIV|UNCHARACTERIZED protein R424|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PKDCFIIYQ 9
PKD F +YQ
Sbjct: 102 PKDEFELYQ 110


>sp|VF282_IIV6|PUTATIVE transcription factor 282R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 KDCFIIYQG 10
KDC YQG
Sbjct: 209 KDCINQYQG 217


>sp|Y252_SIRV1|UNCHARACTERIZED protein 252|Sulfolobus islandicus rod-shaped virus 1

Query: 1 PKDCFIIY 8
PKD +++Y
Sbjct: 154 PKDVYLLY 161


>sp|DPOL_TUHV2|DNA polymerase catalytic subunit|Tupaiid herpesvirus (strain 2)

Query: 1 PKDCFIIYQG 10
P+D F+++ G
Sbjct: 735 PEDVFVVHVG 744


>sp|DPOL_TUHV1|DNA polymerase catalytic subunit|Tupaiid herpesvirus 1 (strain 1)

Query: 1 PKDCFIIYQG 10
P+D F+++ G
Sbjct: 735 PEDVFVVHVG 744




114|Sequence|566|575|IIYQGHHGDV

>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 3 YQGHHGDV 10
YQG HGD+
Sbjct: 77 YQGDHGDM 84


>sp|HEMA_CVMDV|HEMAGGLUTININ-ESTERASE coronavirus (strain DVIM) (MHV-DVIM)

Query: 2 IYQGHHGD 9
+Y HHGD
Sbjct: 332 VYDSHHGD 339


>sp|NS1_ADVG|INITIATOR protein NS1|Aleutian mink disease parvovirus (strain

Query: 1 IIYQGHHGDV 10
+IY HH D+
Sbjct: 159 VIYSNHHCDI 168


>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169)

Query: 3 YQGHHG 8
YQGH+G
Sbjct: 79 YQGHYG 84


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 3 YQGHHGDV 10
Y G+HGD+
Sbjct: 752 YGGYHGDM 759


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 5 GHHGDV 10
GHHG+V
Sbjct: 1047 GHHGEV 1052


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 5 GHHGDV 10
GHHG+V
Sbjct: 1047 GHHGEV 1052


>sp|CAPSP_ADEGX|PENTON protein|Fowl adenovirus C serotype 10

Query: 2 IYQGHHGDV 10
+Y+G+H D+
Sbjct: 255 VYKGYHPDI 263


>sp|CAPSP_ADEG1|PENTON protein|Fowl adenovirus A serotype 1

Query: 2 IYQGHHGDV 10
+Y+G+H D+
Sbjct: 246 VYKGYHPDI 254


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 1 IIYQGHHG 8
++Y HHG
Sbjct: 991 VLYTAHHG 998


>sp|YL577_MIMIV|UNCHARACTERIZED protein L577|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 YQGHH 7
YQGHH
Sbjct: 209 YQGHH 213


>sp|U2_FBNY2|PROTEIN U2|Faba bean necrotic yellows virus

Query: 2 IYQGHHGDV 10
+Y G+H DV
Sbjct: 113 VYYGNHNDV 121


>sp|NEC2_PSHV1|NUCLEAR egress protein 2|Psittacid herpesvirus 1 (isolate Amazon

Query: 6 HHGDV 10
HHGDV
Sbjct: 93 HHGDV 97


>sp|U2_FBNY1|PROTEIN U2|Faba bean necrotic yellows virus

Query: 2 IYQGHHGDV 10
+Y G+H DV
Sbjct: 113 VYYGNHNDV 121


>sp|YR602_MIMIV|PUTATIVE ankyrin repeat protein R602|Acanthamoeba polyphaga mimivirus

Query: 1 IIYQGHHGD 9
I YQ HH D
Sbjct: 89 IAYQNHHQD 97


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4 QGHHGD 9
QGHH D
Sbjct: 2219 QGHHPD 2224


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4 QGHHGD 9
QGHH D
Sbjct: 2219 QGHHPD 2224


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)

Query: 2 IYQGHHGDV 10
IY+G H DV
Sbjct: 948 IYRGPHVDV 956


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 2 IYQGHHGDV 10
IY+G H DV
Sbjct: 921 IYRGPHVDV 929


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 2 IYQGHHGDV 10
IY+G H DV
Sbjct: 926 IYRGPHVDV 934


>sp|CAPSD_LAMBD|MAJOR capsid protein|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 IIYQGHHGDV 10
+ Y+G +GDV
Sbjct: 239 VSYKGMYGDV 248


>sp|CAPSD_BPN15|MAJOR capsid protein|Escherichia phage N15 (Bacteriophage N15)

Query: 1 IIYQGHHGDV 10
+ Y+G +GDV
Sbjct: 239 VSYKGMYGDV 248


>sp|COLL2_MIMIV|COLLAGEN-LIKE protein 2|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 YQGHHGDV 10
Y+G +GDV
Sbjct: 148 YEGENGDV 155


>sp|YL684_MIMIV|UNCHARACTERIZED protein L684|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 IYQGHHGDV 10
++ GH GD+
Sbjct: 130 LHAGHKGDI 138




115|Sequence|571|580|HHGDVGAPIA

>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 2 HGDVGAPI 9
HGD+G P+
Sbjct: 2353 HGDLGVPL 2360


>sp|057L_IIV3|UNCHARACTERIZED protein 057L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 HHGDVG 6
HHGD+G
Sbjct: 114 HHGDLG 119


>sp|HEMA_CVMDV|HEMAGGLUTININ-ESTERASE coronavirus (strain DVIM) (MHV-DVIM)

Query: 1 HHGDVG 6
HHGD G
Sbjct: 336 HHGDAG 341


>sp|A16_FOWPN|VIRION membrane protein A16 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 HHGDVGAPIA 10
H GD+G+ I+
Sbjct: 44 HSGDIGSEIS 53


>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)

Query: 1 HHGDVGAPI 9
HHG API
Sbjct: 681 HHGTKKAPI 689


>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 HHGDVGAPI 9
HHG API
Sbjct: 681 HHGTKKAPI 689


>sp|TRM1_EHV1V|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain V592)

Query: 2 HGDVGAPIA 10
HGD+G P A
Sbjct: 313 HGDMGQPRA 321


>sp|TRM1_EHV1B|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain Ab4p)

Query: 2 HGDVGAPIA 10
HGD+G P A
Sbjct: 313 HGDMGQPRA 321


>sp|TRM1_EHV1|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain HVS25A)

Query: 2 HGDVGAPIA 10
HGD+G P A
Sbjct: 313 HGDMGQPRA 321


>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 HGDVGAPI 9
HGD G P+
Sbjct: 1209 HGDCGLPL 1216


>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 HGDVGAPI 9
HGD G P+
Sbjct: 1209 HGDCGLPL 1216


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 HGDVGAPI 9
HGD G P+
Sbjct: 1209 HGDCGLPL 1216


>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 HGDVGAPI 9
HGD G P+
Sbjct: 1209 HGDCGLPL 1216


>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 HGDVGAPI 9
HGD G P+
Sbjct: 1209 HGDCGLPL 1216


>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus

Query: 2 HGDVGAPI 9
HGD G P+
Sbjct: 1202 HGDCGLPL 1209


>sp|POLN_ABPVR|REPLICASE polyprotein|Acute bee paralysis virus (strain

Query: 2 HGDVGAPI 9
+GD GAP+
Sbjct: 1302 NGDCGAPL 1309


>sp|GAM1_ADEG1|PROTEIN GAM-1|Fowl adenovirus A serotype 1

Query: 1 HHGDVGAPIA 10
H GD+G PI
Sbjct: 134 HVGDLGFPIG 143




116|Sequence|576|585|GAPIADVILP

>sp|NCAP_RYSV|NUCLEOPROTEIN yellow stunt virus (RYSV)

Query: 1 GAPIADVILP 10
G P+A VI+P
Sbjct: 129 GTPVAGVIIP 138


>sp|Y202_AFV2P|PUTATIVE transmembrane protein ORF202|Acidianus filamentous virus 2 (isolate

Query: 1 GAPIADVI 8
G PIADVI
Sbjct: 93 GIPIADVI 100


>sp|BP48_BPT4|BASEPLATE tail-tube junction protein gp48|Enterobacteria phage T4

Query: 2 APIADVILP 10
+PIA+++LP
Sbjct: 122 SPIANILLP 130


>sp|DTXH_CORBE|DIPHTHERIA toxin homolog CRM228|Corynephage beta

Query: 3 PIADVILP 10
PIA V+LP
Sbjct: 453 PIASVLLP 460


>sp|IE0_NPVLD|IMMEDIATE-EARLY protein IE-0|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 1 GAPIADVIL 9
G P+A VIL
Sbjct: 25 GQPVAQVIL 33


>sp|DTX_COROM|DIPHTHERIA toxin|Corynephage omega

Query: 3 PIADVILP 10
PIA V+LP
Sbjct: 453 PIAGVLLP 460


>sp|DTX_CORBE|DIPHTHERIA toxin|Corynephage beta

Query: 3 PIADVILP 10
PIA V+LP
Sbjct: 460 PIAGVLLP 467


>sp|VE6_HPV5B|PROTEIN E6|Human papillomavirus type 5b

Query: 1 GAPIADVILP 10
G P+ D I+P
Sbjct: 31 GIPLIDCIIP 40


>sp|CAPSD_RRSVT|INNER capsid protein VP3|Rice ragged stunt virus (isolate

Query: 1 GAPIADVIL 9
G P+AD+I
Sbjct: 205 GVPMADIIF 213


>sp|BPJ_BPP2|BASEPLATE protein J|Escherichia phage P2 (Bacteriophage P2)

Query: 1 GAPIADVIL 9
AP+AD++L
Sbjct: 274 AAPLADIVL 282




117|Sequence|581|590|DVILPGAAYT

>sp|PRO_BPHK7|PROHEAD protease|Enterobacteria phage HK97 (Bacteriophage HK97)

Query: 1 DVILPGA 7
D+ILPGA
Sbjct: 41 DIILPGA 47


>sp|CAPSH_ADEP3|HEXON protein|Porcine adenovirus A serotype 3

Query: 2 VILPGAAYT 10
++LPGA YT
Sbjct: 557 LLLPGATYT 565


>sp|RPOL_BPSP6|DNA-DIRECTED RNA polymerase|Enterobacteria phage SP6 (Bacteriophage SP6)

Query: 1 DVILPGAAY 9
D + PGAAY
Sbjct: 676 DYLTPGAAY 684


>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)

Query: 1 DVILPGAAY 9
D+I+PG +Y
Sbjct: 116 DMIVPGPSY 124


>sp|GP_SFTS|ENVELOPMENT polyprotein|Dabie bandavirus (Severe fever with

Query: 1 DVILPGAAY 9
D+I+PG +Y
Sbjct: 116 DMIVPGPSY 124


>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 1 DVILPGAAY 9
D+I PG Y
Sbjct: 522 DIITPGGGY 530


>sp|MVP_PVMA|P3N-PIPO polyprotein|Potato virus A (PVA)

Query: 1 DVILPGAAY 9
D+I PG Y
Sbjct: 522 DIITPGGGY 530


>sp|GP16_BPP22|INTERNAL virion protein gp16|Salmonella phage P22 (Bacteriophage P22)

Query: 1 DVILPGAAYT 10
D+I PG A+T
Sbjct: 215 DMIKPGNAFT 224


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 1 DVILPGAAY 9
D ++PGAA+
Sbjct: 662 DELIPGAAF 670


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 DVILPGAAY 9
D ++PGAA+
Sbjct: 662 DELIPGAAF 670


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 1 DVILPGAAY 9
D+I+PG Y
Sbjct: 118 DMIVPGPTY 126


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 DVILPGAAYT 10
DV+ PG Y+
Sbjct: 1790 DVLFPGQKYS 1799


Query: 1 DVILPG 6
DVILPG
Sbjct: 760 DVILPG 765


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 DVILPGAAYT 10
DV+ PG Y+
Sbjct: 1790 DVLFPGQKYS 1799


Query: 1 DVILPG 6
DVILPG
Sbjct: 760 DVILPG 765


>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate

Query: 1 DVILPGAAY 9
D+I PG A+
Sbjct: 1905 DIISPGVAF 1913


>sp|NS5_LDCPR|NON-STRUCTURAL protein 5|Lymantria dispar cypovirus 1 (isolate

Query: 1 DVILPGAAY 9
D+I GAAY
Sbjct: 214 DIICEGAAY 222


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 1 DVILPGAAYT 10
D +PG AYT
Sbjct: 662 DESIPGIAYT 671


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 DVILPGAAY 9
DV+ PG Y
Sbjct: 540 DVVAPGEGY 548


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 1 DVILPGAAY 9
DV+ PG Y
Sbjct: 540 DVVAPGEGY 548




118|Sequence|586|595|GAAYTEKSAT

>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)

Query: 1 GAAYTEK 7
GAAYTE+
Sbjct: 1890 GAAYTER 1896




119|Sequence|591|600|EKSATYVNTE

>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11

Query: 2 KSATYVNTE 10
KSATY N++
Sbjct: 347 KSATYTNSD 355


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 2 KSATYVNTE 10
KSA YV+TE
Sbjct: 2028 KSAWYVDTE 2036


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 2 KSATYVNTE 10
KSA YV+TE
Sbjct: 2029 KSAWYVDTE 2037




120|Sequence|596|605|YVNTEGRAQQ

>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)

Query: 3 NTEGRAQ 9
N EGRAQ
Sbjct: 528 NAEGRAQ 534


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 3 NTEGRAQ 9
N EGRAQ
Sbjct: 528 NAEGRAQ 534


>sp|PURZ_BPVC8|N6-SUCCINO-2-AMINO-2'-DEOXYADENYLATE synthase|Vibrio phage phiVC8

Query: 1 YVNTEGR 7
Y+N EGR
Sbjct: 45 YINAEGR 51


>sp|PURZ_BPPMB|N6-SUCCINO-2-AMINO-2'-DEOXYADENYLATE synthase|Salmonella phage PMBT28

Query: 1 YVNTEGR 7
Y+N EGR
Sbjct: 48 YINAEGR 54


>sp|PURZ_BPSHA|N6-SUCCINO-2-AMINO-2'-DEOXYADENYLATE synthase|Acinetobacter phage SH-Ab 15497

Query: 1 YVNTEGR 7
Y+N EGR
Sbjct: 45 YINREGR 51




121|Sequence|601|610|GRAQQTKVAV

***** No hits found ******


122|Sequence|606|615|TKVAVTPPGL

>sp|GAG_SIVV1|GAG polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 2 KVAVTPPG 9
K AVTPPG
Sbjct: 115 KTAVTPPG 122


>sp|POL_SIVV1|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 2 KVAVTPPG 9
K AVTPPG
Sbjct: 115 KTAVTPPG 122


>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1368 KVSATPPG 1375


>sp|POLG_ZYMVR|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1368 KVSATPPG 1375


>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1365 KVSATPPG 1372


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1331 KVSATPPG 1338


>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1429 KVSATPPG 1436


>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1429 KVSATPPG 1436


>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1363 KVSATPPG 1370


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1365 KVSATPPG 1372


>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1355 KVSATPPG 1362


>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1467 KVSATPPG 1474


>sp|POLG_PRSVH|GENOME polyprotein|Papaya ringspot virus (strain P

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1602 KVSATPPG 1609


>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1369 KVSATPPG 1376


>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1381 KVSATPPG 1388


>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1357 KVSATPPG 1364


>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1526 KVSATPPG 1533


>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1526 KVSATPPG 1533


>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1343 KVSATPPG 1350


>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1370 KVSATPPG 1377


>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus

Query: 2 KVAVTPPG 9
KV+ TPPG
Sbjct: 1374 KVSATPPG 1381


>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)

Query: 1 TKVAVTPP 8
++VAVTPP
Sbjct: 1218 SQVAVTPP 1225


>sp|L_LBVAV|RNA-DIRECTED RNA polymerase L|Lettuce big-vein associated virus (isolate

Query: 1 TKVAVTPPGL 10
TKV V PP L
Sbjct: 366 TKVKVIPPNL 375


>sp|POLG_TMEVG|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 KVAVTPPG 9
++A TPPG
Sbjct: 540 RIAYTPPG 547


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 3 VAVTPPGL 10
+A TPPG+
Sbjct: 467 IAYTPPGV 474


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 3 VAVTPPGL 10
+A TPPG+
Sbjct: 463 LAYTPPGI 470


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 3 VAVTPPGL 10
+A TPPG+
Sbjct: 461 LAYTPPGI 468


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 3 VAVTPPGL 10
+A TPPG+
Sbjct: 463 LAYTPPGI 470




123|Sequence|611|620|TPPGLAREDW

>sp|YR22_TORVR|UNCHARACTERIZED protein in RNA2|Tomato ringspot virus (isolate raspberry)

Query: 3 PGLAREDW 10
PG+ REDW
Sbjct: 69 PGVPREDW 76


>sp|Y054_OSHVF|UNCHARACTERIZED protein ORF54|Ostreid herpesvirus 1 (isolate France)

Query: 1 TPPGLAREDW 10
TPP L DW
Sbjct: 160 TPPNLEIPDW 169


>sp|LT_POVMC|LARGE T antigen|Murine polyomavirus (strain Crawford small-plaque)

Query: 1 TPPGLARED 9
TPP ARED
Sbjct: 273 TPPKKARED 281


>sp|LT_POVM3|LARGE T antigen|Murine polyomavirus (strain A3) (MPyV)

Query: 1 TPPGLARED 9
TPP ARED
Sbjct: 278 TPPKKARED 286


>sp|LT_POVM1|LARGE T antigen|Mus musculus polyomavirus 1 (MPyV)

Query: 1 TPPGLARED 9
TPP ARED
Sbjct: 278 TPPKKARED 286


>sp|LT_POVBG|LARGE T antigen|Murine polyomavirus (strain BG) (MPyV)

Query: 1 TPPGLARED 9
TPP ARED
Sbjct: 278 TPPKKARED 286


>sp|LT_POVMA|LARGE T antigen|Murine polyomavirus (strain A2) (MPyV)

Query: 1 TPPGLARED 9
TPP ARED
Sbjct: 278 TPPKKARED 286


>sp|RPOL_BPKMV|DNA-DIRECTED RNA polymerase|Pseudomonas phage phiKMV

Query: 2 PPGLARED 9
PPGLA+ D
Sbjct: 543 PPGLAKAD 550


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 TPPGLAREDW 10
TP GLA + W
Sbjct: 652 TPVGLAVDPW 661


>sp|NRDEB_BPSPB|RIBONUCLEOSIDE-DIPHOSPHATE reductase nrdEB subunit alpha|Bacillus phage SPbeta (Bacillus phage

Query: 3 PGLAREDW 10
PGL+ ++W
Sbjct: 1000 PGLSAQNW 1007


>sp|PP220_ASFWA|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 2 PPGLAREDW 10
P G EDW
Sbjct: 615 PGGAQEEDW 623


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 1 TPPGLA 6
TPPG+A
Sbjct: 464 TPPGIA 469


>sp|VNS5_MSTV|NON-STRUCTURAL protein NS5|Maize stripe virus (MStV)

Query: 2 PPGLAREDW 10
PP L RED+
Sbjct: 201 PPPLKREDF 209


>sp|ORFB_WDSV|ORF-B protein|Walleye dermal sarcoma virus (WDSV)

Query: 2 PPGLAREDW 10
P GL +E+W
Sbjct: 44 PGGLTQEEW 52


>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn

Query: 1 TPPGLAREDW 10
TP G E+W
Sbjct: 266 TPGGYCLEEW 275




124|Sequence|616|625|AREDWKIIRA

>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 1 AREDWKIIRA 10
A ++WK IRA
Sbjct: 45 ANQNWKAIRA 54


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 1 AREDWKIIRA 10
A ++WK IRA
Sbjct: 45 ANQNWKAIRA 54


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 1 AREDWKIIRA 10
A ++WK IRA
Sbjct: 45 ANQNWKAIRA 54


>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 2 REDWK 6
REDWK
Sbjct: 934 REDWK 938


>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33

Query: 3 EDWKIIR 9
E WK+IR
Sbjct: 31 EHWKLIR 37


>sp|YR22_TORVR|UNCHARACTERIZED protein in RNA2|Tomato ringspot virus (isolate raspberry)

Query: 2 REDWKIIR 9
REDW++ R
Sbjct: 73 REDWQLER 80


>sp|VE2_HPV58|REGULATORY protein E2|Human papillomavirus 58

Query: 3 EDWKIIR 9
E WK+IR
Sbjct: 31 EHWKLIR 37


>sp|POL_RTBVP|POLYPROTEIN P3|Rice tungro bacilliform virus (isolate

Query: 2 REDWKII 8
+EDW II
Sbjct: 1457 KEDWNII 1463




125|Sequence|621|630|KIIRALSEIA

***** No hits found ******


126|Sequence|626|635|LSEIAGMTLP

>sp|045R_IIV3|UNCHARACTERIZED protein 045R|Invertebrate iridescent virus 3 (IIV-3)

Query: 4 IAGMTLP 10
IAGMT+P
Sbjct: 35 IAGMTVP 41


>sp|VP5_BTV1S|OUTER capsid protein VP5|Bluetongue virus 1 (isolate South

Query: 1 LSEIAGMT 8
+ EIAGMT
Sbjct: 217 IQEIAGMT 224


>sp|VP5_BTV1A|OUTER capsid protein VP5|Bluetongue virus 1 (isolate Australia)

Query: 1 LSEIAGMT 8
+ EIAGMT
Sbjct: 217 IQEIAGMT 224


>sp|VP5_BTV17|OUTER capsid protein VP5|Bluetongue virus 17 (isolate USA)

Query: 1 LSEIAGMT 8
+ EIAGMT
Sbjct: 217 IQEIAGMT 224


>sp|VP5_BTV11|OUTER capsid protein VP5|Bluetongue virus 11 (isolate USA)

Query: 1 LSEIAGMT 8
+ EIAGMT
Sbjct: 217 IQEIAGMT 224


>sp|VP5_BTV10|OUTER capsid protein VP5|Bluetongue virus 10 (isolate USA)

Query: 1 LSEIAGMT 8
+ EIAGMT
Sbjct: 217 IQEIAGMT 224


>sp|VP5_BTV13|OUTER capsid protein VP5|Bluetongue virus 13 (isolate USA)

Query: 1 LSEIAGMT 8
+ EIAGMT
Sbjct: 217 IQEIAGMT 224


>sp|VP5_BTV2A|OUTER capsid protein VP5|Bluetongue virus 2 (isolate USA)

Query: 1 LSEIAGMT 8
+ EIAGMT
Sbjct: 217 IQEIAGMT 224




127|Sequence|631|640|GMTLPYDTLD

>sp|L_MOBVC|RNA-DIRECTED RNA polymerase L|Mobala mammarenavirus (isolate Rat/Central African

Query: 2 MTLPYDTLD 10
MTLPYDT +
Sbjct: 974 MTLPYDTYE 982


>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)

Query: 1 GMTLPYD 7
G+TLP+D
Sbjct: 1756 GLTLPFD 1762


>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)

Query: 1 GMTLPYD 7
G+TLP+D
Sbjct: 1756 GLTLPFD 1762


>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)

Query: 1 GMTLPYD 7
G+TLP+D
Sbjct: 1756 GLTLPFD 1762


>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)

Query: 1 GMTLPYD 7
G+TLP+D
Sbjct: 1756 GLTLPFD 1762


>sp|VF184_IIV6|PUTATIVE helicase 184R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 MTLPYD 7
MT+PYD
Sbjct: 611 MTIPYD 616


>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)

Query: 1 GMTLPYD 7
G+TLP+D
Sbjct: 1756 GLTLPFD 1762


>sp|301L_IIV6|UNCHARACTERIZED protein 301L|Invertebrate iridescent virus 6 (IIV-6)

Query: 4 LPYDTLD 10
LPY+T+D
Sbjct: 23 LPYETVD 29


>sp|YL675_MIMIV|PUTATIVE ankyrin repeat protein L675|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 TLPYDTLD 10
T+PY T+D
Sbjct: 256 TMPYGTID 263


>sp|GE_GAHVM|ENVELOPE glycoprotein E|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 GMTLPYD 7
GM +PYD
Sbjct: 447 GMNVPYD 453


>sp|Y9KD_BPBF2|UNCHARACTERIZED 9.2 kDa protein|Escherichia phage Bf23 (Enterobacteria phage

Query: 4 LPYDTLD 10
+P+DT+D
Sbjct: 38 IPFDTID 44


>sp|POLG_MNV1|GENOME polyprotein|Norovirus (isolate Mouse/NoV/United

Query: 1 GMTLPY 6
GMT+PY
Sbjct: 204 GMTVPY 209




128|Sequence|636|645|YDTLDQVRNR

>sp|REP3_MVDC3|PARA-REP C3|Milk vetch dwarf C3 alphasatellite

Query: 1 YDTLDQVRNR 10
Y L+QV+NR
Sbjct: 231 YGVLEQVKNR 240


>sp|CAPSD_BPKPP|MAJOR capsid protein|Pseudomonas phage KPP10 (Bacteriophage KPP10)

Query: 2 DTLDQVRNR 10
+TLDQVR R
Sbjct: 108 ETLDQVRMR 116


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 1 YDTLDQVRN 9
YD +D+V+N
Sbjct: 988 YDEVDKVKN 996


>sp|CAPSD_FCVF9|CAPSID protein VP1|Feline calicivirus (strain F9) (FCV)

Query: 1 YDTLDQVRN 9
YDT D ++N
Sbjct: 451 YDTADIIKN 459


>sp|REP6_SCSC6|PARA-REP C6|Subterranean clover stunt C6 alphasatellite

Query: 1 YDTLDQVRNR 10
Y ++QV+NR
Sbjct: 232 YGVIEQVKNR 241




129|Sequence|641|650|QVRNRLEEVS

>sp|Y083_OSHVF|UNCHARACTERIZED protein ORF83|Ostreid herpesvirus 1 (isolate France)

Query: 1 QVRNRLEEVS 10
+ +N+LEE+S
Sbjct: 154 KTKNKLEEIS 163




130|Sequence|646|655|LEEVSPNLVR

>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 1 LEEVSPNLVR 10
+EEVS LVR
Sbjct: 1767 MEEVSKELVR 1776


>sp|YL268_MIMIV|PUTATIVE serine/threonine-protein kinase L268|Acanthamoeba polyphaga

Query: 2 EEVSPNLV 9
EE+SP++V
Sbjct: 294 EEISPDMV 301


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 1 LEEVSPNLVR 10
+EEVS LVR
Sbjct: 1768 MEEVSKELVR 1777


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1 LEEVSPNLVR 10
+EEVS L+R
Sbjct: 1768 MEEVSQELIR 1777




131|Sequence|651|660|PNLVRYDDIE

>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 1 PNLVRYDD 8
P+L+R+DD
Sbjct: 569 PDLIRHDD 576


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 1 PNLVRYDD 8
P+L+R+DD
Sbjct: 569 PDLIRHDD 576


>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b

Query: 1 PNLVRYDDIE 10
P L +YDD+E
Sbjct: 118 PFLNKYDDVE 127


>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a

Query: 1 PNLVRYDDIE 10
P L +YDD+E
Sbjct: 118 PFLNKYDDVE 127


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 1 PNLVRYDD 8
P ++RYDD
Sbjct: 3400 PRIIRYDD 3407


>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13

Query: 1 PNLVRYDDIE 10
P L +YDD+E
Sbjct: 118 PLLNKYDDVE 127


>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11

Query: 1 PNLVRYDDIE 10
P L +YDD+E
Sbjct: 118 PLLNKYDDVE 127


>sp|V9_SPTNK|UNCHARACTERIZED protein V9|Sputnik virophage

Query: 1 PNLVRYDDIE 10
PNL++Y+ I+
Sbjct: 31 PNLIKYETID 40


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 1 PNLVRYDD 8
PNLV Y D
Sbjct: 1160 PNLVLYSD 1167


>sp|GP5_EAVBU|GLYCOPROTEIN 5|Equine arteritis virus (strain Bucyrus)

Query: 2 NLVRYDD 8
NL+RYD+
Sbjct: 44 NLLRYDE 50


>sp|V008_FOWPN|PUTATIVE C-type lectin protein FPV008/FPV253|Fowlpox virus (strain NVSL)

Query: 2 NLVRYDDIE 10
+L+R+D+IE
Sbjct: 83 SLIRFDNIE 91


>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)

Query: 1 PNLVRYDDI 9
PNL+ Y D+
Sbjct: 158 PNLLGYTDV 166


>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 PNLVRYDDI 9
PNL+ Y D+
Sbjct: 158 PNLLGYTDV 166


>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant

Query: 1 PNLVRYDDI 9
PNL+ Y D+
Sbjct: 158 PNLLGYTDV 166


>sp|ENV_SIVGB|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate GB1)

Query: 1 PNLVRYDDIE 10
P+L YD++E
Sbjct: 82 PSLPDYDEVE 91


>sp|VP4_MPRVN|UNCHARACTERIZED protein VP4|Micromonas pusilla reovirus (isolate Netherlands/2005)

Query: 2 NLVRYDDIE 10
NL+RY IE
Sbjct: 515 NLLRYSGIE 523


>sp|VL1_COPV6|MAJOR capsid protein L1|Canine oral papillomavirus (strain Y62)

Query: 1 PNLVRYDDIE 10
P RY+D+E
Sbjct: 122 PTFDRYNDVE 131


>sp|DINI1_BPVT1|DINI-LIKE protein|Enterobacteria phage VT1-Sakai

Query: 5 RYDDIE 10
RYDD+E
Sbjct: 34 RYDDVE 39




132|Sequence|656|665|YDDIEGANYF

>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5

Query: 1 YDDIEGAN 8
YDD+EG N
Sbjct: 275 YDDLEGGN 282


>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2

Query: 1 YDDIEGAN 8
YDD+EG N
Sbjct: 275 YDDLEGGN 282


>sp|CAPSP_ADES1|PENTON protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 YDDIEGAN 8
YDD++G N
Sbjct: 236 YDDLQGGN 243


>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)

Query: 2 DDIEGAN 8
DDI+GAN
Sbjct: 486 DDIKGAN 492


>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)

Query: 2 DDIEGAN 8
DDI+GAN
Sbjct: 486 DDIKGAN 492


>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)

Query: 2 DDIEGAN 8
DDI+GAN
Sbjct: 486 DDIKGAN 492


>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)

Query: 2 DDIEGAN 8
DDI+GAN
Sbjct: 486 DDIKGAN 492


>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)

Query: 2 DDIEGAN 8
DDI+GAN
Sbjct: 486 DDIKGAN 492


>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)

Query: 2 DDIEGAN 8
DDI+GAN
Sbjct: 486 DDIKGAN 492


>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)

Query: 2 DDIEGAN 8
DDI+GAN
Sbjct: 486 DDIKGAN 492


>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain

Query: 1 YDDIEGANYF 10
+DD+EG+ F
Sbjct: 242 FDDVEGSQSF 251


>sp|PKG9_BPPRD|DNA packaging ATPase P9|Enterobacteria phage PRD1 (Bacteriophage

Query: 2 DDIEGANY 9
D IEGAN+
Sbjct: 52 DSIEGANH 59


>sp|GH_SHV21|ENVELOPE glycoprotein H|Saimiriine herpesvirus 2 (strain 11)

Query: 1 YDDIEGAN 8
Y+DIEGA+
Sbjct: 223 YNDIEGAS 230


>sp|RPOLV_BPN4|VIRION DNA-directed RNA polymerase|Enterobacteria phage N4 (Bacteriophage

Query: 1 YDDIEGAN 8
YD I GAN
Sbjct: 2512 YDTISGAN 2519


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 DDIEGANYF 10
DDIEG + F
Sbjct: 2213 DDIEGESSF 2221


>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus

Query: 1 YDDIEGANYF 10
+DD+EG+ F
Sbjct: 242 FDDVEGSASF 251


>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 YDDIEGANYF 10
+DD+EG+ F
Sbjct: 242 FDDVEGSASF 251


>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 YDDIEGANYF 10
+DD+EG+ F
Sbjct: 242 FDDVEGSASF 251


>sp|GAD1_BPPHT|GABIJA anti-defense 1|Bacillus phage phi3T (Bacteriophage phi-3T)

Query: 2 DDIEGANYF 10
D+IEG YF
Sbjct: 16 DNIEGKRYF 24


>sp|NTP1_VACCW|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Western Reserve)

Query: 1 YDDIEGANYF 10
+DD+EG+ F
Sbjct: 242 FDDVEGSASF 251


>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)

Query: 1 YDDIEGANYF 10
+DD+EG+ F
Sbjct: 242 FDDVEGSASF 251


>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)

Query: 1 YDDIEGANYF 10
+DD+EG+ F
Sbjct: 242 FDDVEGSASF 251


>sp|NTP1_RFVKA|NUCLEOSIDE triphosphatase I|Rabbit fibroma virus (strain Kasza)

Query: 1 YDDIEGANYF 10
+DD+EG+ F
Sbjct: 242 FDDVEGSATF 251


>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1

Query: 1 YDDIEGANYF 10
++D+EG+ F
Sbjct: 241 FEDVEGSELF 250


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1 YDDIEGANY 9
+DD++ NY
Sbjct: 22 FDDVQAPNY 30


>sp|CATV_NPVBM|VIRAL cathepsin|Bombyx mori nuclear polyhedrosis virus

Query: 1 YDDIEGANYF 10
YD ++ NYF
Sbjct: 19 YDPLKAPNYF 28


>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 YDDIEG 6
YDDI+G
Sbjct: 609 YDDIDG 614


>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)

Query: 1 YDDIEG 6
YDDI+G
Sbjct: 609 YDDIDG 614


>sp|DPOL_OSHVF|DNA polymerase|Ostreid herpesvirus 1 (isolate France)

Query: 1 YDDIEGANY 9
Y DIE +NY
Sbjct: 253 YRDIEFSNY 261




133|Sequence|661|670|GANYFQQANE

>sp|UNG_EHV2|URACIL-DNA glycosylase|Equine herpesvirus 2 (strain 86/87)

Query: 1 GANYFQQANE 10
G +F+QANE
Sbjct: 231 GCGHFKQANE 240


>sp|MCES_VARV|MRNA-CAPPING enzyme regulatory subunit|Variola virus

Query: 1 GANYFQQ 7
GANYF Q
Sbjct: 40 GANYFLQ 46


>sp|MCES_VAR67|MRNA-CAPPING enzyme regulatory subunit OPG124|Variola virus (isolate

Query: 1 GANYFQQ 7
GANYF Q
Sbjct: 40 GANYFLQ 46


>sp|MCES_VACCW|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain Western

Query: 1 GANYFQQ 7
GANYF Q
Sbjct: 40 GANYFLQ 46


>sp|MCES_VACCC|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain

Query: 1 GANYFQQ 7
GANYF Q
Sbjct: 40 GANYFLQ 46


>sp|MCES_VACCA|MRNA-CAPPING enzyme regulatory subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1 GANYFQQ 7
GANYF Q
Sbjct: 40 GANYFLQ 46


>sp|MCES_MONPV|MRNA-CAPPING enzyme regulatory subunit OPG124|Monkeypox virus (MPXV)

Query: 1 GANYFQQ 7
GANYF Q
Sbjct: 40 GANYFLQ 46


>sp|VP22_HHV2H|TEGUMENT protein VP22|Human herpesvirus 2 (strain HG52)

Query: 1 GANYFQQANE 10
G N Q+ANE
Sbjct: 248 GKNLLQRANE 257


>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)

Query: 1 GANYFQQANE 10
G N Q+ANE
Sbjct: 248 GKNLLQRANE 257


>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain

Query: 1 GANYFQQ 7
GANYF Q
Sbjct: 40 GANYFLQ 46


>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 4 YFQQANE 10
Y+QQ NE
Sbjct: 174 YYQQTNE 180


>sp|UNG_SHV21|URACIL-DNA glycosylase|Saimiriine herpesvirus 2 (strain 11)

Query: 1 GANYFQQANE 10
G ++F QAN+
Sbjct: 228 GCDHFNQANK 237


>sp|MCES_FOWPN|MRNA-CAPPING enzyme small subunit|Fowlpox virus (strain NVSL) (FPV)

Query: 1 GANYFQQ 7
GANYF Q
Sbjct: 42 GANYFLQ 48


>sp|VF602_ASFB7|PROTEIN B602L|African swine fever virus (strain

Query: 3 NYFQQANE 10
NYF Q NE
Sbjct: 444 NYFNQNNE 451


>sp|VF602_ASFK5|PROTEIN B602L|African swine fever virus (isolate

Query: 3 NYFQQANE 10
NYF Q NE
Sbjct: 385 NYFNQNNE 392


>sp|VF602_ASFP4|PROTEIN B602L|African swine fever virus (isolate

Query: 3 NYFQQANE 10
NYF Q NE
Sbjct: 412 NYFNQNNE 419


>sp|VF602_ASFWA|PROTEIN B602L|African swine fever virus (isolate

Query: 3 NYFQQANE 10
NYF Q NE
Sbjct: 392 NYFNQNNE 399




134|Sequence|666|675|QQANELSKLV

***** No hits found ******


135|Sequence|671|680|LSKLVNQQLL

***** No hits found ******


136|Sequence|676|685|NQQLLADPLV

>sp|NEF_SIVVT|PROTEIN Nef|Simian immunodeficiency virus agm.vervet (isolate

Query: 4 LLADPLV 10
LLADPL+
Sbjct: 30 LLADPLI 36


>sp|NEF_SIVV1|PROTEIN Nef|Simian immunodeficiency virus agm.vervet (isolate

Query: 4 LLADPLV 10
LLADPL+
Sbjct: 30 LLADPLI 36


>sp|VE1_COPV6|REPLICATION protein E1|Canine oral papillomavirus (strain Y62)

Query: 1 NQQLLADP 8
N Q+LADP
Sbjct: 249 NVQMLADP 256


>sp|EXLYS_BPSP6|PEPTIDOGLYCAN hydrolase gp36|Enterobacteria phage SP6 (Bacteriophage SP6)

Query: 2 QQLLADPLV 10
QQL+ DP++
Sbjct: 412 QQLIEDPII 420


>sp|NEF_SIVVG|PROTEIN Nef|Simian immunodeficiency virus agm.vervet (isolate

Query: 4 LLADPLV 10
LLADPL+
Sbjct: 30 LLADPLI 36


>sp|A1_BPSP|MINOR capsid protein A1|Enterobacteria phage SP (Bacteriophage SP)

Query: 4 LLADPLV 10
LLADPL+
Sbjct: 115 LLADPLI 121


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 1 NQQLLADPLV 10
N+QL +PLV
Sbjct: 693 NEQLCGEPLV 702


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 NQQLLADPLV 10
N+QL +PLV
Sbjct: 693 NEQLCGEPLV 702


>sp|NECK2_BPT4|NECK protein gp14|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 NQQLLADPLV 10
N Q+LAD LV
Sbjct: 38 NSQILADVLV 47


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 1 NQQLLADPLV 10
N+QL +PLV
Sbjct: 693 NEQLCGEPLV 702


>sp|CAPSD_BPSP|CAPSID protein|Enterobacteria phage SP (Bacteriophage SP)

Query: 4 LLADPLV 10
LLADPL+
Sbjct: 115 LLADPLI 121


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1 NQQLLADPLV 10
NQQ L+ P++
Sbjct: 1919 NQQCLSKPII 1928


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1 NQQLLADPLV 10
NQQ L+ P++
Sbjct: 1919 NQQCLSKPII 1928




137|Sequence|681|690|ADPLVPPQLT

>sp|POL1_BAMMN|GENOME polyprotein 1|Barley mild mosaic virus (strain

Query: 2 DPLVPP 7
DP+VPP
Sbjct: 2014 DPIVPP 2019


>sp|Y240_ATV|UNCHARACTERIZED protein ORF240|Acidianus two-tailed virus (ATV)

Query: 1 ADPLVPPQLT 10
+ PLVP Q+T
Sbjct: 120 SKPLVPAQIT 129


>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV

Query: 1 ADPLVPPQLT 10
DPL P+LT
Sbjct: 415 GDPLFHPKLT 424


>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate

Query: 1 ADPLVPPQLT 10
DPL P+LT
Sbjct: 415 GDPLFHPKLT 424


>sp|DIT9_BPPZA|TAIL knob protein gp9|Bacillus phage PZA (Bacteriophage PZA)

Query: 5 VPPQLT 10
+PPQLT
Sbjct: 489 IPPQLT 494


>sp|DIT9_BPPH2|TAIL knob protein gp9|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 5 VPPQLT 10
+PPQLT
Sbjct: 489 IPPQLT 494


>sp|MATRX_RINDR|MATRIX protein|Rinderpest virus (strain RBOK) (RDV)

Query: 1 ADPLVPPQ 8
+DPL PP+
Sbjct: 62 SDPLSPPR 69


>sp|CAPSD_FCVUR|CAPSID protein VP1|Feline calicivirus (strain Cat/United

Query: 2 DPLVPP 7
DP+VPP
Sbjct: 80 DPVVPP 85




138|Sequence|686|695|PPQLTIKDFY

>sp|ENLYS_BPKMV|SAR-ENDOLYSIN phage phiKMV

Query: 3 QLTIKDF 9
Q+TIKDF
Sbjct: 58 QMTIKDF 64


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 1 PPQLTIKDFY 10
PP L DFY
Sbjct: 2424 PPNLDTTDFY 2433


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 1 PPQLTIKDFY 10
PP L DFY
Sbjct: 2424 PPNLDTTDFY 2433


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 PPQLTIKDFY 10
PPQL ++FY
Sbjct: 5371 PPQLLEREFY 5380


>sp|3002R_ASFM2|PROTEIN MGF 300-2R|African swine fever virus (isolate

Query: 2 PQLTIKDFY 10
PQ+++K+F+
Sbjct: 114 PQISLKEFH 122


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 1 PPQLTIKDF 9
PP+LT DF
Sbjct: 364 PPRLTEDDF 372




139|Sequence|691|700|IKDFYMTDSI

>sp|PHOSP_IRKV|PHOSPHOPROTEIN virus (IRKV)

Query: 2 KDFYMTDS 9
+DFYMT+S
Sbjct: 79 EDFYMTES 86


>sp|YR366_MIMIV|PUTATIVE ATP-dependent RNA helicase R366|Acanthamoeba polyphaga mimivirus

Query: 1 IKDFYMTDS 9
I+DFY+TD
Sbjct: 900 IRDFYLTDE 908


>sp|PHOSP_EBLV1|PHOSPHOPROTEIN bat lyssavirus 1 (strain

Query: 2 KDFYMTDS 9
+DFYMT+S
Sbjct: 79 EDFYMTES 86


>sp|PHOSP_KHUV|PHOSPHOPROTEIN virus (KHUV)

Query: 3 DFYMTDS 9
DFYM DS
Sbjct: 80 DFYMADS 86


>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 1 IKDFYMTDSI 10
+KDFY D++
Sbjct: 371 LKDFYPEDAL 380


>sp|PHOSP_EBLV2|PHOSPHOPROTEIN bat lyssavirus 2 (strain

Query: 2 KDFYMTDS 9
+DFYM +S
Sbjct: 79 EDFYMAES 86


>sp|YR150_MIMIV|UNCHARACTERIZED protein R150|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 DFYMTDSI 10
DFY+T++I
Sbjct: 18 DFYLTETI 25


>sp|PHOSP_ARAV|PHOSPHOPROTEIN virus (ARAV)

Query: 2 KDFYMTDS 9
+DFYM +S
Sbjct: 79 EDFYMAES 86


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 1 IKDFYMTD 8
+KDFY+ D
Sbjct: 3356 LKDFYIED 3363


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 IKDFYMTD 8
+KDFY+ D
Sbjct: 3356 LKDFYIED 3363




140|Sequence|696|705|MTDSISRASQ

>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2 TDSISRAS 9
TDSISR S
Sbjct: 1772 TDSISRVS 1779




141|Sequence|701|710|SRASQTMAKC

***** No hits found ******


142|Sequence|706|715|TMAKCVKAVT

***** No hits found ******


143|Sequence|711|720|VKAVTEGAQA

>sp|VG26_BPML5|MINOR tail protein Gp26|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 KAVTEGAQ 9
KA+TEG Q
Sbjct: 801 KAITEGIQ 808


>sp|VG26_BPMD2|MINOR tail protein Gp26|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 KAVTEGAQ 9
KA+TEG Q
Sbjct: 800 KAITEGIQ 807




144|Sequence|716|727|EGAQAVEEPSIC

>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 GAQAVEEP 9
GA+AV EP
Sbjct: 26 GAEAVSEP 33


>sp|RPB6_ASFWA|DNA-DIRECTED RNA polymerase subunit 6|African swine fever virus (isolate

Query: 6 VEEPSIC 12
VE PSIC
Sbjct: 40 VESPSIC 46


>sp|RPB6_ASFP4|DNA-DIRECTED RNA polymerase RPB6 homolog|African swine fever virus (isolate

Query: 6 VEEPSIC 12
VE PSIC
Sbjct: 40 VESPSIC 46


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 GAQAVEEPS 10
G QAV EP+
Sbjct: 322 GKQAVSEPN 330


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 GAQAVEEPS 10
G QAV EP+
Sbjct: 322 GKQAVSEPN 330


>sp|RPB6_ASFK5|DNA-DIRECTED RNA polymerase subunit 6|African swine fever virus (isolate

Query: 6 VEEPSIC 12
VE PSIC
Sbjct: 40 VESPSIC 46


>sp|RPB6_ASFB7|DNA-DIRECTED RNA polymerase RPB6 homolog|African swine fever virus (strain

Query: 6 VEEPSIC 12
VE PSIC
Sbjct: 40 VESPSIC 46


>sp|RPB6_ASFM2|DNA-DIRECTED RNA polymerase RPB6 homolog|African swine fever virus (isolate

Query: 6 VEEPSIC 12
VE PSIC
Sbjct: 44 VESPSIC 50


>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2 GAQAVEEP 9
GA+A+ EP
Sbjct: 26 GAEAISEP 33


>sp|YR348_MIMIV|UNCHARACTERIZED protein R348|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 EGAQAVEEP 9
EG AVE P
Sbjct: 644 EGVSAVENP 652


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 3 AQAVEEPSIC 12
A ++E+P++C
Sbjct: 37 AYSLEDPTLC 46


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 3 AQAVEEPSIC 12
A ++E+P++C
Sbjct: 37 AYSLEDPTLC 46


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 3 AQAVEEPSIC 12
A ++E+P++C
Sbjct: 37 AYSLEDPTLC 46


>sp|U2_BPMU|TAIL fiber assembly protein U'|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 EGAQAVEEPSI 11
EGA VE P I
Sbjct: 72 EGANVVEVPDI 82


>sp|U2_BPP1|TAIL fiber assembly protein U'|Escherichia phage P1 (Bacteriophage P1)

Query: 1 EGAQAVEEPSI 11
EGA VE P I
Sbjct: 72 EGASVVELPDI 82






THE END