NDUS1_HUMAN HumanVirus

1|SequenceR|10|1|LAKRVPIRLM

>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)

Query: 3   KRVPIRL 9
           KR+P+R+
Sbjct: 211 KRIPVRI 217




2|SequenceR|15|6|KSLGVLAKRV

>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 1    KSLGVLAKRV 10
            +S+G L +RV
Sbjct: 1556 RSMGALRRRV 1565


>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)

Query: 2   SLGVLAKRV 10
           +L VLAKR+
Sbjct: 311 ALDVLAKRL 319


>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)

Query: 2   SLGVLAKRV 10
           +L VLAKR+
Sbjct: 311 ALDVLAKRL 319


>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)

Query: 2   SLGVLAKRV 10
           +L VLAKR+
Sbjct: 311 ALDVLAKRL 319


>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)

Query: 2   SLGVLAKRV 10
           +L VLAKR+
Sbjct: 311 ALDVLAKRL 319


>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)

Query: 2   SLGVLAKRV 10
           +L VLAKR+
Sbjct: 311 ALDVLAKRL 319


>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human

Query: 2   SLGVLAKRV 10
           +L VLAKR+
Sbjct: 311 ALDVLAKRL 319




3|SequenceR|20|11|CGKPSKSLGV

>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1   CGKPSKSLGV 10
           CG PS++ GV
Sbjct: 534 CGFPSQAAGV 543


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1   CGKPSKSLGV 10
           CG PS++ GV
Sbjct: 534 CGFPSQAAGV 543


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1   CGKPSKSLGV 10
           CG P+K L V
Sbjct: 265 CGTPAKKLCV 274


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1   CGKPSKSLGV 10
           CG P+K L V
Sbjct: 265 CGTPAKKLCV 274


>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human

Query: 1   CGKPSKS 7
           CGKP K+
Sbjct: 428 CGKPKKN 434


>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus

Query: 2   GKPSKSLG 9
           GKP++S+G
Sbjct: 277 GKPNESIG 284


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 2   GKPSKSLGV 10
            KPSK +GV
Sbjct: 444 AKPSKFIGV 452


>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   GKPSKSLGV 10
            KPSK +GV
Sbjct: 444 AKPSKFIGV 452


>sp|W_NIPAV|PROTEIN W|Nipah virus

Query: 2   GKPSKSLG 9
           GKP++S+G
Sbjct: 277 GKPNESIG 284


>sp|K1_HHV8P|PROTEIN K1|Human herpesvirus 8 type P

Query: 1   CGKPSKSL 8
           CG+PS ++
Sbjct: 100 CGQPSNTV 107


>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus

Query: 2   GKPSKSLG 9
           GKP++S+G
Sbjct: 277 GKPNESIG 284


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 2    GKPSKSLG 9
            G PS SLG
Sbjct: 1247 GLPSASLG 1254


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 1   CGKPSKSLG 9
           CGK + +LG
Sbjct: 422 CGKRNANLG 430




4|SequenceR|25|16|ATTRVCGKPS

>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)

Query: 4   RVCGKP 9
           ++CGKP
Sbjct: 256 QLCGKP 261


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 3   TRVCGKP 9
           T+VCG P
Sbjct: 561 TKVCGAP 567


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3   TRVCGKP 9
           T+VCG P
Sbjct: 561 TKVCGAP 567


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 3   TRVCGKP 9
           T+VCG P
Sbjct: 561 TKVCGAP 567


>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)

Query: 3   TRVCGKP 9
           T+VCG P
Sbjct: 561 TKVCGAP 567


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2    TTRVCGKP 9
            TTR+ G P
Sbjct: 2086 TTRLTGSP 2093


>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)

Query: 4   RVCGKP 9
           ++CGKP
Sbjct: 248 QLCGKP 253


>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain

Query: 4   RVCGKP 9
           ++CGKP
Sbjct: 247 QLCGKP 252


>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human

Query: 5   VCGKP 9
           +CGKP
Sbjct: 427 LCGKP 431


>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor

Query: 3   TRVCGKPS 10
           TR+C K S
Sbjct: 538 TRICEKGS 545


>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor

Query: 3   TRVCGKPS 10
           TR+C K S
Sbjct: 538 TRICEKGS 545


>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor

Query: 3   TRVCGKPS 10
           TR+C K S
Sbjct: 538 TRICEKGS 545


>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor

Query: 3   TRVCGKPS 10
           TR+C K S
Sbjct: 538 TRICEKGS 545


>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor

Query: 3   TRVCGKPS 10
           TR+C K S
Sbjct: 538 TRICEKGS 545


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 6   CGKP 9
           CGKP
Sbjct: 415 CGKP 418


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 5   VCGKP 9
           VCG+P
Sbjct: 664 VCGQP 668


>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human

Query: 1   ATTRVCGKPS 10
           ATT   G PS
Sbjct: 294 ATTNYVGTPS 303


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 6   CGKP 9
           CGKP
Sbjct: 415 CGKP 418


>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1

Query: 3   TRVCG 7
           TRVCG
Sbjct: 273 TRVCG 277


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 6   CGKP 9
           CGKP
Sbjct: 415 CGKP 418


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 6   CGKPS 10
           CGKP+
Sbjct: 196 CGKPA 200




5|SequenceR|30|21|NSAATATTRV

>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   AATATTR 9
           AATATTR
Sbjct: 937 AATATTR 943


>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61

Query: 2   SAATATTRV 10
           SAA+A+T+V
Sbjct: 372 SAASASTKV 380




6|SequenceR|35|26|FVEILNSAAT

>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 4    ILNSAAT 10
            +LNSAAT
Sbjct: 1273 LLNSAAT 1279


>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United

Query: 1   FVEILNSAAT 10
           +VE+LN + T
Sbjct: 811 YVELLNKSLT 820




7|SequenceR|40|31|SQGDVFVEIL

>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong

Query: 1  SQGDVFV 7
          S+GDVFV
Sbjct: 91 SKGDVFV 97


>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1  SQGDVFV 7
          S+GDVFV
Sbjct: 91 SKGDVFV 97


>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 95  SKGDVFV 101


>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 94  SKGDVFV 100


>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005

Query: 1  SQGDVFV 7
          S+GDVFV
Sbjct: 82 SKGDVFV 88


>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004

Query: 1  SQGDVFV 7
          S+GDVFV
Sbjct: 90 SKGDVFV 96


>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003

Query: 1  SQGDVFV 7
          S+GDVFV
Sbjct: 90 SKGDVFV 96


>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 95  SKGDVFV 101


>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1  SQGDVFV 7
          S+GDVFV
Sbjct: 90 SKGDVFV 96


>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1  SQGDVFV 7
          S+GDVFV
Sbjct: 90 SKGDVFV 96


>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky

Query: 1  SQGDVFV 7
          S+GDVFV
Sbjct: 90 SKGDVFV 96


>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1  SQGDVFV 7
          S+GDVFV
Sbjct: 90 SKGDVFV 96


>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1  SQGDVFV 7
          S+GDVFV
Sbjct: 90 SKGDVFV 96


>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea

Query: 1  SQGDVFV 7
          S+GDVFV
Sbjct: 90 SKGDVFV 96


>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky

Query: 1  SQGDVFV 7
          S+GDVFV
Sbjct: 90 SKGDVFV 96


>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong

Query: 1   SQGDVFV 7
           S+GDVFV
Sbjct: 110 SKGDVFV 116


>sp|NRAM_I82A2|NEURAMINIDASE A virus (strain A/Camel/Mongolia/1982

Query: 1  SQGDVFV 7
          S+GDVFV
Sbjct: 93 SKGDVFV 99


>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New

Query: 1   SQGDVFV 7
           S+GD+FV
Sbjct: 110 SKGDIFV 116


>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New

Query: 1   SQGDVFV 7
           S+GD+FV
Sbjct: 110 SKGDIFV 116


>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967

Query: 1   SQGDVFV 7
           S+GD+FV
Sbjct: 110 SKGDIFV 116


>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961

Query: 1   SQGDVFV 7
           S+GD+FV
Sbjct: 110 SKGDIFV 116


>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   GDVFVE 8
           GD+FVE
Sbjct: 521 GDLFVE 526


>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)

Query: 3   GDVFVE 8
           GD+FVE
Sbjct: 521 GDLFVE 526


>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate

Query: 1  SQGDVFVE 8
          SQG +F++
Sbjct: 47 SQGQMFID 54


>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)

Query: 4   DVFVEI 9
           DVFVE+
Sbjct: 274 DVFVEL 279




8|SequenceR|45|36|PEVMVSQGDV

>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    PEVMVSQG 8
            P V++S+G
Sbjct: 5404 PRVLISKG 5411


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1    PEVMVSQGD 9
            PEV   QG+
Sbjct: 2076 PEVWTRQGE 2084


>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65

Query: 1   PEVMVSQGDV 10
           PEV +  G+V
Sbjct: 121 PEVTIDSGEV 130


>sp|PG069_VAR67|TRUNCATED protein OPG069|Variola virus (isolate Human/India/Ind3/1967)

Query: 4  MVSQGDV 10
          M+S GD+
Sbjct: 1  MISMGDI 7




9|SequenceR|50|41|LVTTGPEVMV

>sp|NS1_I56A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/Prague/1/1956

Query: 3   TTGPEV 8
           TTGPEV
Sbjct: 225 TTGPEV 230


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 1   LVTTGP 6
           LVTTGP
Sbjct: 846 LVTTGP 851


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 1   LVTTGP 6
           L+TTGP
Sbjct: 846 LITTGP 851


>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4  TGPEVM 9
          TGPE+M
Sbjct: 18 TGPELM 23


>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4  TGPEVM 9
          TGPE+M
Sbjct: 18 TGPELM 23


>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4  TGPEVM 9
          TGPE+M
Sbjct: 18 TGPELM 23


>sp|VL2_HPV70|MINOR capsid protein L2|Human papillomavirus type 70

Query: 2   VTTGPEVMV 10
           VTTGP++++
Sbjct: 403 VTTGPDIVL 411


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2    VTTGPEVMV 10
            +TTGP V V
Sbjct: 2063 ITTGPSVPV 2071


>sp|UL130_HCMVM|ENVELOPE glycoprotein UL130|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  VTTGPE 7
          V+TGPE
Sbjct: 77 VSTGPE 82


>sp|UL130_HCMVA|UNCHARACTERIZED protein UL130|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  VTTGPE 7
          V+TGPE
Sbjct: 77 VSTGPE 82


>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 3   TTGPEVM 9
           T+GP VM
Sbjct: 430 TSGPSVM 436


>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3   TTGPEVM 9
           +TGP VM
Sbjct: 605 STGPRVM 611




10|SequenceR|55|46|KECAQLVTTG

>sp|YVBE_VACCC|UNCHARACTERIZED 10.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  KECAQLVTTG 10
          K+C Q VT+G
Sbjct: 25 KQCVQTVTSG 34


>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49

Query: 1   KECAQLV 7
           +ECAQ+V
Sbjct: 363 RECAQMV 369


>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22

Query: 1   KECAQLV 7
           +ECAQ+V
Sbjct: 362 RECAQMV 368


>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human

Query: 1   KECAQLV 7
           K+CAQ+V
Sbjct: 366 KDCAQMV 372


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 2    ECAQLV 7
            +CAQLV
Sbjct: 1239 QCAQLV 1244


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 1   KECAQLV 7
           ++CAQ+V
Sbjct: 361 RDCAQMV 367


>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)

Query: 2   ECAQLVT 8
           EC Q+VT
Sbjct: 222 ECLQIVT 228


>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain

Query: 2  ECAQLVTTG 10
          ECA + +TG
Sbjct: 79 ECAWVSSTG 87


>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate

Query: 2  ECAQLVTTG 10
          ECA + +TG
Sbjct: 79 ECAWVSSTG 87


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1    KECAQLVTT 9
            K+C  L+TT
Sbjct: 1957 KDCLDLLTT 1965


>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  CAQLVTTG 10
          CA+ VT G
Sbjct: 19 CARTVTVG 26


>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  CAQLVTTG 10
          CA+ VT G
Sbjct: 19 CARTVTVG 26




11|SequenceR|60|51|IQMGVKECAQ

>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22

Query: 5   VKECAQ 10
           V+ECAQ
Sbjct: 361 VRECAQ 366


>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human

Query: 5   VKECAQ 10
           VK+CAQ
Sbjct: 365 VKDCAQ 370


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   IQMGVKECAQ 10
           IQ+G+++C +
Sbjct: 263 IQLGLQKCVR 272


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   IQMGVKECAQ 10
           IQ+G+++C +
Sbjct: 263 IQLGLQKCVR 272


>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   IQMGVKECAQ 10
           IQ+G+++C +
Sbjct: 269 IQIGLQKCVR 278


>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   IQMGVKECAQ 10
           IQ+G+++C +
Sbjct: 268 IQIGLQKCVR 277


>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   IQMGVKECAQ 10
           IQ+G+++C +
Sbjct: 263 IQLGLQKCVR 272


>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   IQMGVKECAQ 10
           IQ+G+++C +
Sbjct: 263 IQLGLQKCVR 272


>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38

Query: 5   VKECA 9
           VKECA
Sbjct: 357 VKECA 361


>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   IQMGVKECAQ 10
           IQ+G+++C +
Sbjct: 268 IQIGLQKCVR 277


>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9

Query: 5   VKECA 9
           VKECA
Sbjct: 358 VKECA 362


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   IQMGVKECAQ 10
           IQ+G+++C +
Sbjct: 268 IQIGLQKCVR 277


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   IQMGVKECAQ 10
           IQ+G+++C +
Sbjct: 268 IQIGLQKCVR 277




12|SequenceR|65|56|YCFRPIQMGV

>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2   CFRPI 6
           CFRPI
Sbjct: 699 CFRPI 703


>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)

Query: 2   CFRPI 6
           CFRPI
Sbjct: 699 CFRPI 703


>sp|CAPSD_HCYV5|CAPSID protein|Human associated cyclovirus 1 (isolate

Query: 2   CFRPIQMGV 10
           CFR  Q+G+
Sbjct: 129 CFRGTQVGI 137


>sp|VE6_HPV39|PROTEIN E6|Human papillomavirus 39

Query: 1  YCFRPIQ 7
          YC RP+Q
Sbjct: 34 YCRRPLQ 40


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    CFRPIQ 7
            C RPI+
Sbjct: 1302 CLRPIE 1307


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    CFRPIQ 7
            C RPI+
Sbjct: 1302 CLRPIE 1307


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    CFRPIQ 7
            C RPI+
Sbjct: 1302 CLRPIE 1307


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    CFRPIQ 7
            C RPI+
Sbjct: 1302 CLRPIE 1307


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    CFRPIQ 7
            C RPI+
Sbjct: 1302 CLRPIE 1307


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 2   CFRPIQM 8
           CF PI++
Sbjct: 353 CFSPIKI 359


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 2   CFRPIQM 8
           CF PI++
Sbjct: 344 CFSPIKI 350


>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 1   YCFRPIQMG 9
           Y F P++ G
Sbjct: 640 YTFLPVRFG 648


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2    CFRPIQ 7
            CF+P++
Sbjct: 2256 CFKPLK 2261


>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 1   YCFRPIQMGV 10
           +C+RP+   +
Sbjct: 275 HCYRPLLQAI 284


>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)

Query: 1   YCFRPIQMG 9
           YC   I+MG
Sbjct: 545 YCLIIIEMG 553


>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain

Query: 1   YCFRPIQMG 9
           YC   I+MG
Sbjct: 545 YCLIIIEMG 553




13|SequenceR|70|61|SLREHYCFRP

>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 4   EHYCFRP 10
           E+Y FRP
Sbjct: 453 ENYTFRP 459


>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  SLREHYCFRP 10
          S+R H C+ P
Sbjct: 75 SIRVHLCYWP 84


>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  SLREHYCFRP 10
          S+R H C+ P
Sbjct: 75 SIRVHLCYWP 84


>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   SLREHYCFRP 10
           SLR  YC  P
Sbjct: 220 SLRFRYCAPP 229


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 6   YCFRP 10
           YCF P
Sbjct: 509 YCFTP 513


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 6   YCFRP 10
           YCF P
Sbjct: 509 YCFTP 513


>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   SLREHYCFRP 10
           SLR  YC  P
Sbjct: 221 SLRFRYCAPP 230


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 6   YCFRP 10
           YCF P
Sbjct: 509 YCFTP 513


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 6   YCFRP 10
           YCF P
Sbjct: 509 YCFTP 513


>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   SLREHYCFRP 10
           SLR  YC  P
Sbjct: 220 SLRFRYCAPP 229


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 5    HYCFRP 10
            H CF+P
Sbjct: 1860 HPCFQP 1865


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 6   YCFRP 10
           YCF P
Sbjct: 508 YCFTP 512


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 6   YCFRP 10
           YCF P
Sbjct: 509 YCFTP 513


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 6   YCFRP 10
           YCF P
Sbjct: 509 YCFTP 513


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2    LREHYCF 8
            LRE  CF
Sbjct: 2142 LREEVCF 2148


Query: 6   YCFRP 10
           YCF P
Sbjct: 508 YCFTP 512


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 6   YCFRP 10
           YCF P
Sbjct: 508 YCFTP 512


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 6   YCFRP 10
           YCF P
Sbjct: 508 YCFTP 512


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


Query: 5   HYCFRP 10
           HY  RP
Sbjct: 488 HYALRP 493


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 6   YCFRP 10
           YCF P
Sbjct: 508 YCFTP 512


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 6   YCFRP 10
           YCF P
Sbjct: 508 YCFTP 512


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 6   YCFRP 10
           YCF P
Sbjct: 509 YCFTP 513


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 6   YCFRP 10
           YCF P
Sbjct: 508 YCFTP 512


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 6   YCFRP 10
           YCF P
Sbjct: 508 YCFTP 512


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus

Query: 5   HYCFRP 10
           HY F P
Sbjct: 682 HYSFHP 687


>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate

Query: 5   HYCFRP 10
           HY F P
Sbjct: 682 HYSFHP 687


>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)

Query: 5   HYCFRP 10
           HY F P
Sbjct: 682 HYSFHP 687


>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5   HYCFRP 10
           HY F P
Sbjct: 682 HYSFHP 687


>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 5   HYCFRP 10
           HY F P
Sbjct: 682 HYSFHP 687


>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)

Query: 5   HYCFRP 10
           HY F P
Sbjct: 683 HYSFHP 688


>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /

Query: 5   HYCFRP 10
           HY F P
Sbjct: 682 HYSFHP 687


>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)

Query: 5   HYCFRP 10
           HY F P
Sbjct: 682 HYSFHP 687


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 6   YCFRP 10
           YCF P
Sbjct: 508 YCFTP 512


>sp|VE6_HPV51|PROTEIN E6|Human papillomavirus 51

Query: 1   SLREHYCFRP 10
           S+R H C RP
Sbjct: 100 SIRCHRCQRP 109


>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5   HYCFR 9
           HYC R
Sbjct: 217 HYCAR 221


>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)

Query: 6   YCFRP 10
           YCF P
Sbjct: 509 YCFTP 513


>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain

Query: 1   SLREHYCF 8
           ++RE+ CF
Sbjct: 808 TMRENKCF 815


>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)

Query: 6   YCFRP 10
           YCF P
Sbjct: 507 YCFTP 511


>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)

Query: 6   YCFRP 10
           YCF P
Sbjct: 508 YCFTP 512


>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)

Query: 6   YCFRP 10
           YCF P
Sbjct: 508 YCFTP 512


>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1

Query: 2  LREHYCFR 9
          L EH C R
Sbjct: 66 LGEHECLR 73


>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)

Query: 6   YCFRP 10
           YCF P
Sbjct: 509 YCFTP 513


>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)

Query: 1   SLREHYCF 8
           ++RE+ CF
Sbjct: 808 TMRENKCF 815




14|SequenceR|75|66|CNGAVSLREH

>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    CNGAVSLR 8
            CN   SLR
Sbjct: 5332 CNSQTSLR 5339


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    CNGAVSLR 8
            CN   SLR
Sbjct: 5309 CNSQTSLR 5316


>sp|VME1_SARS2|MEMBRANE protein|Severe acute respiratory syndrome coronavirus

Query: 3   GAVSLREH 10
           GAV LR H
Sbjct: 141 GAVILRGH 148




15|SequenceR|80|71|VLCMRCNGAV

>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)

Query: 1   VLCMRCNGA 9
           +LC +CN A
Sbjct: 97  LLCYKCNAA 105


>sp|NP03_HHV2H|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain HG52)

Query: 1   VLCMRCNGA 9
           VLC R N A
Sbjct: 167 VLCKRANAA 175


>sp|NP03_HHV23|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain 333)

Query: 1   VLCMRCNGA 9
           VLC R N A
Sbjct: 167 VLCKRANAA 175


>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)

Query: 1   VLCMRCNGA 9
           +LC +CN A
Sbjct: 96  LLCYKCNYA 104


>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   VLCMRCNGA 9
           +LC +CN A
Sbjct: 96  LLCYKCNYA 104


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 1    VLCMRCNGA 9
            ++C +C+GA
Sbjct: 2111 LICRQCHGA 2119


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 5   RCNGAV 10
           RC+GAV
Sbjct: 471 RCDGAV 476


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 5   RCNGAV 10
           RC+GAV
Sbjct: 471 RCDGAV 476


>sp|VP6_ROTJ1|INTERMEDIATE capsid protein VP6|Rotavirus X (strain

Query: 5  RCNGAV 10
          RCNG V
Sbjct: 43 RCNGKV 48


>sp|VP6_ROTB2|INTERMEDIATE capsid protein VP6|Rotavirus X (isolate

Query: 5  RCNGAV 10
          RCNG V
Sbjct: 43 RCNGKV 48


>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  VLCMRCN 7
          V+C +CN
Sbjct: 11 VVCSKCN 17


>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  VLCMRCN 7
          V+C +CN
Sbjct: 11 VVCSKCN 17


>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   LCMRC 6
           LC+RC
Sbjct: 585 LCIRC 589


>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)

Query: 2   LCMRCNGA 9
           LC +C GA
Sbjct: 154 LCAKCLGA 161


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 1  VLCMRCNGAV 10
          V C R NG +
Sbjct: 44 VYCQRVNGVM 53


>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus

Query: 1   VLCMRCNG 8
           V+C  C+G
Sbjct: 135 VVCQSCSG 142


>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)

Query: 2   LCMRCNGA 9
           LC +C GA
Sbjct: 154 LCAKCLGA 161


>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin)

Query: 1  VLCMRCNG 8
          +LC+ CNG
Sbjct: 70 ILCLCCNG 77


>sp|M2_I36A0|MATRIX protein 2|Influenza A virus (strain A/Henry/1936

Query: 5  RCNGA 9
          RCNG+
Sbjct: 18 RCNGS 22


>sp|M2_I35A3|MATRIX protein 2|Influenza A virus (strain A/USA:Phila/1935

Query: 5  RCNGA 9
          RCNG+
Sbjct: 18 RCNGS 22


>sp|M2_I34A1|MATRIX protein 2|Influenza A virus (strain A/Puerto

Query: 5  RCNGA 9
          RCNG+
Sbjct: 18 RCNGS 22


>sp|M2_I06A0|MATRIX protein 2|Influenza A virus (strain A/Russia:St.Petersburg/8/2006

Query: 5  RCNGA 9
          RCNG+
Sbjct: 18 RCNGS 22


>sp|M2_I000X|MATRIX protein 2|Influenza A virus (strain A/X-31

Query: 5  RCNGA 9
          RCNG+
Sbjct: 18 RCNGS 22


>sp|NP1_HBOC3|NON-STRUCTURAL protein NP-1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 3   CMRCN 7
           C RCN
Sbjct: 174 CERCN 178


>sp|NP1_HBOC1|NON-STRUCTURAL protein NP-1|Primate bocaparvovirus 1 (strain Human

Query: 3   CMRCN 7
           C RCN
Sbjct: 175 CERCN 179


>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   LCMRCNGA 9
           LC+ C GA
Sbjct: 112 LCLICVGA 119


>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   LCMRCNGA 9
           LC+ C GA
Sbjct: 112 LCLICVGA 119


>sp|VE7_HPV68|PROTEIN E7|Human papillomavirus 68

Query: 2  LCMRCNGAV 10
          LC +CN A+
Sbjct: 68 LCCKCNKAL 76


>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   LCMRCNGA 9
           LC+ C GA
Sbjct: 112 LCLICVGA 119


>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41

Query: 1   VLCMRCNGAV 10
           ++ ++CNG V
Sbjct: 410 LVLVKCNGMV 419


>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40

Query: 1   VLCMRCNGAV 10
           ++ ++CNG V
Sbjct: 395 LVLVKCNGMV 404


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2  LCMRCNGA 9
          LC+ C GA
Sbjct: 14 LCIVCLGA 21


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  LCMRCNGA 9
          LC+ C GA
Sbjct: 14 LCIVCLGA 21


>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)

Query: 2  LCMRC 6
          +CMRC
Sbjct: 48 VCMRC 52


>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)

Query: 2  LCMRC 6
          +CMRC
Sbjct: 50 VCMRC 54


>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  LCMRCNG 8
          LC  C+G
Sbjct: 68 LCFYCSG 74


>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  LCMRCNG 8
          LC  C+G
Sbjct: 68 LCFYCSG 74


>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41

Query: 2   LCMRCNGA 9
           LC+  NGA
Sbjct: 254 LCLTKNGA 261


>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40

Query: 2   LCMRCNGA 9
           LC+  NGA
Sbjct: 254 LCLTKNGA 261


>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12

Query: 2   LCMRCNGAV 10
           LC+  NG++
Sbjct: 432 LCLTKNGSI 440


>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /

Query: 1   VLCMRCNGA 9
           V CM  NGA
Sbjct: 363 VRCMLDNGA 371




16|SequenceR|85|76|AKEIEVLCMR

>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 2    KEIEVLC 8
            K+IE+LC
Sbjct: 1250 KDIEMLC 1256


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 2    KEIEVLC 8
            K+IE+LC
Sbjct: 1242 KDIEMLC 1248


>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   KEIEVLCMR 10
           K +E++C R
Sbjct: 284 KTVEIVCYR 292


>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)

Query: 2   KEIEVLCMR 10
           KE+E  C R
Sbjct: 249 KEVEFKCRR 257


>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   KEIEVLCMR 10
           KE+E  C R
Sbjct: 249 KEVEFKCRR 257


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 1    AKEIEVL 7
             KEIEVL
Sbjct: 1613 GKEIEVL 1619


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 2    KEIEVLC 8
            ++IE+LC
Sbjct: 1241 RDIEMLC 1247


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 1   AKEIEVLC 8
           AKE ++LC
Sbjct: 244 AKEEQILC 251




17|SequenceR|90|81|AVVKPAKEIE

>sp|VLTF2_VARV|VIRAL late gene transcription factor|Variola virus

Query: 1  AVVKPAKE 8
          AV KPAKE
Sbjct: 17 AVFKPAKE 24


>sp|VLTF2_VAR67|VIRAL late gene transcription factor|Variola virus (isolate

Query: 1  AVVKPAKE 8
          AV KPAKE
Sbjct: 17 AVFKPAKE 24


>sp|VLTF2_MONPV|VIRAL late gene transcription factor|Monkeypox virus (MPXV)

Query: 1  AVVKPAKE 8
          AV KPAKE
Sbjct: 17 AVFKPAKE 24


>sp|VLTF2_VACCC|VIRAL late gene transcription factor|Vaccinia virus (strain Copenhagen)

Query: 1  AVVKPAKE 8
          AV KPAKE
Sbjct: 17 AVFKPAKE 24


>sp|VLTF2_VACCA|VIRAL late gene transcription factor|Vaccinia virus (strain Ankara)

Query: 1  AVVKPAKE 8
          AV KPAKE
Sbjct: 17 AVFKPAKE 24


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1    AVVKPAKEI 9
            AVV P KE+
Sbjct: 1696 AVVAPDKEV 1704


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 2    VVKPAKEI 9
            VV+P KE+
Sbjct: 1597 VVQPGKEV 1604


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 3    VKPAKEI 9
            VKP KE+
Sbjct: 1601 VKPKKEV 1607


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 3    VKPAKEI 9
            VKP KE+
Sbjct: 1601 VKPKKEV 1607


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 3    VKPAKEI 9
            VKP KE+
Sbjct: 1601 VKPHKEV 1607


>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16

Query: 1   AVVKPAKEIE 10
           + + PA+EIE
Sbjct: 331 STIDPAEEIE 340


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 3    VKPAKEI 9
            VKP KE+
Sbjct: 1601 VKPHKEV 1607


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 3    VKPAKEI 9
            VKP KE+
Sbjct: 1601 VKPHKEV 1607


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 3    VKPAKEI 9
            VKP KE+
Sbjct: 1602 VKPRKEV 1608




18|SequenceR|95|86|PMACAAVVKP

>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 1   PMACAAVVKP 10
           P+ CAA +KP
Sbjct: 723 PIDCAAHLKP 732


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 1   PMACAAVVKP 10
           P+ CAA +KP
Sbjct: 723 PIDCAAHLKP 732


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 2   MACAAVVKP 10
           M+C+ V++P
Sbjct: 165 MSCSFVIEP 173


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 2   MACAAVVKP 10
           M+C+ V++P
Sbjct: 165 MSCSFVIEP 173


>sp|PG112_VACCC|LATE protein OPG112|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  MACAAVVK 9
          +ACA ++K
Sbjct: 87 LACADIIK 94




19|SequenceR|100|91|WGKMVPMACA

>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1    WGKMVPMAC 9
            +GK +P+AC
Sbjct: 1382 YGKAIPIAC 1390


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 2    GKMVPM 7
            GK+VPM
Sbjct: 2171 GKLVPM 2176


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2    GKMVPMA 8
            GK++PMA
Sbjct: 1802 GKILPMA 1808


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 2    GKMVPMA 8
            GK++PMA
Sbjct: 1802 GKILPMA 1808


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2    GKMVPMA 8
            GK++PMA
Sbjct: 1803 GKILPMA 1809


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 1    WGKMVPM 7
            WG+ VP+
Sbjct: 1380 WGEEVPL 1386


>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   WGKMVPMAC 9
           W + VP+ C
Sbjct: 277 WNETVPINC 285


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 1    WGKMVPMACA 10
            W K+  M CA
Sbjct: 1566 WMKISAMLCA 1575


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1   WGKMVPMACA 10
           W K+V  +C+
Sbjct: 113 WDKLVKESCS 122


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1   WGKMVPMACA 10
           W K+V  +C+
Sbjct: 113 WDKLVKESCS 122


>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)

Query: 3   KMVPMACA 10
           K++P+ C 
Sbjct: 157 KLIPLGCG 164


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 1    WGKMVPMACA 10
            W K+  M CA
Sbjct: 1565 WMKISAMLCA 1574


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1    WGKMVPMACA 10
            W K+  M CA
Sbjct: 1565 WMKISAMLCA 1574


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1    WGKMVPMAC 9
            +GK +P+ C
Sbjct: 1374 YGKAIPLEC 1382


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 1    WGKMVPM 7
            WG  VP+
Sbjct: 1393 WGDEVPL 1399


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 1    WGKMVPM 7
            WG  VP+
Sbjct: 1390 WGDEVPL 1396


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1    WGKMVPMACA 10
            W K+  M CA
Sbjct: 1565 WLKISAMLCA 1574


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 2   GKMVPMACA 10
           GK+VP++ A
Sbjct: 616 GKIVPLSKA 624


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 2   GKMVPMACA 10
           GK+VP++ A
Sbjct: 616 GKIVPLSKA 624


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   GKMVPMACA 10
           GK+VP++ A
Sbjct: 616 GKIVPLSKA 624


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2   GKMVPMACA 10
           GK+VP++ A
Sbjct: 616 GKIVPLSKA 624


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 2   GKMVPMACA 10
           GK+VP++ A
Sbjct: 616 GKIVPLSKA 624


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 4   MVPMACA 10
           +VP++CA
Sbjct: 401 VVPVSCA 407


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1    WGKMVPMACA 10
            W K+  M CA
Sbjct: 1563 WLKISAMLCA 1572


>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)

Query: 1   WGKMVPM 7
           WG  VP+
Sbjct: 139 WGSNVPI 145


>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant

Query: 1   WGKMVPM 7
           WG  VP+
Sbjct: 139 WGSNVPI 145


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1    WGKMVPMACA 10
            +GK+V + C 
Sbjct: 2590 YGKVVDLGCG 2599




20|SequenceR|105|96|NTLINWGKMV

>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor

Query: 1   NTLINWGKMV 10
           N+L +WGK++
Sbjct: 254 NSLSDWGKVI 263


>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor

Query: 1   NTLINWGKMV 10
           N+L +WGK++
Sbjct: 254 NSLSDWGKVI 263


>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor

Query: 1   NTLINWGKMV 10
           N+L +WGK++
Sbjct: 254 NSLSDWGKVI 263


>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor

Query: 1   NTLINWGKMV 10
           N+L +WGK++
Sbjct: 254 NSLSDWGKVI 263


>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor

Query: 1   NTLINWGKMV 10
           N+L +WGK++
Sbjct: 254 NSLSDWGKVI 263


>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)

Query: 3   LINWGK 8
           +INWGK
Sbjct: 384 MINWGK 389


>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain

Query: 1  NTLINWG 7
          N+L+ WG
Sbjct: 32 NSLVEWG 38


>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain

Query: 1  NTLINWG 7
          N+L+ WG
Sbjct: 32 NSLVEWG 38


>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)

Query: 1  NTLINWG 7
          N+L+ WG
Sbjct: 32 NSLVEWG 38


>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus

Query: 1  NTLINWG 7
          N+L+ WG
Sbjct: 32 NSLVEWG 38


>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate

Query: 1  NTLINWG 7
          N+L+ WG
Sbjct: 32 NSLVEWG 38


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 1   NTLINWGKM 9
           NTL N GK+
Sbjct: 779 NTLNNMGKL 787


>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United

Query: 1  NTLINWGKMV 10
          NT+I W  ++
Sbjct: 71 NTVIEWSNLI 80


>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   NTLINWGK 8
           NTL+ +GK
Sbjct: 480 NTLMRYGK 487


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 3   LINWGKMV 10
           L NW K+V
Sbjct: 110 LKNWDKLV 117


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 3   LINWGKMV 10
           L NW K+V
Sbjct: 110 LKNWDKLV 117


>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)

Query: 1  NTLINW 6
          NTLI+W
Sbjct: 84 NTLISW 89


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   TLINWGKM 9
           ++I WGK+
Sbjct: 965 SIIIWGKL 972




21|SequenceR|110|101|KSKESNTLIN

>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 1   KSKESNTLI 9
           K+ E+NTLI
Sbjct: 241 KTAETNTLI 249


>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 3   KESNTL 8
           KESNTL
Sbjct: 229 KESNTL 234




22|SequenceR|115|106|GERAKKSKES

>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 1   GERAKKS 7
           GER KK+
Sbjct: 610 GERTKKN 616




23|SequenceR|120|111|LFEMVGERAK

>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)

Query: 1   LFEMVGER 8
           LFEM G R
Sbjct: 461 LFEMHGRR 468


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1    LFEMVG 6
            LFEM+G
Sbjct: 1482 LFEMLG 1487




24|SequenceR|125|116|PHNALLFEMV

>sp|UL92_HHV7J|PROTEIN U63|Human herpesvirus 7 (strain JI)

Query: 2  HNALLFEM 9
          HN L FEM
Sbjct: 29 HNPLTFEM 36


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 1    PHNALLFEM 9
            P NALL E+
Sbjct: 1375 PTNALLHEI 1383


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 1    PHNALLFEM 9
            P NALL E+
Sbjct: 1375 PTNALLHEI 1383


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 1    PHNALLFEM 9
            P NALL E+
Sbjct: 1375 PTNALLHEI 1383


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 1    PHNALLFEM 9
            P NALL E+
Sbjct: 1375 PTNALLHEI 1383


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 1    PHNALLFEM 9
            P NALL E+
Sbjct: 1375 PTNALLHEI 1383


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 1    PHNALLFEM 9
            P NALL E+
Sbjct: 1375 PTNALLHEI 1383


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 1    PHNALLFEM 9
            P NALL E+
Sbjct: 1375 PTNALLHEI 1383


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 1    PHNALLFEM 9
            P NALL E+
Sbjct: 1375 PTNALLHEI 1383


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 1    PHNALLFEM 9
            P NALL E+
Sbjct: 1375 PTNALLHEI 1383


>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   HNALLF 7
           H+ALLF
Sbjct: 581 HDALLF 586


>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   HNALLF 7
           H+ALLF
Sbjct: 587 HDALLF 592


>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)

Query: 2  HNALLFEM 9
          HN + FE+
Sbjct: 34 HNPITFEL 41


>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)

Query: 2  HNALLFEM 9
          HN + FE+
Sbjct: 36 HNPITFEL 43




25|SequenceR|130|121|IPCDLPHNAL

>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate

Query: 2   PCDLPH 7
           PC LPH
Sbjct: 448 PCPLPH 453


>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 2   PCDLPH 7
           PC LPH
Sbjct: 457 PCPLPH 462


>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate

Query: 2   PCDLPH 7
           PC LPH
Sbjct: 453 PCPLPH 458


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 2   PCDLPH 7
           PCDL H
Sbjct: 132 PCDLKH 137


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 2   PCDLPH 7
           PCDL H
Sbjct: 132 PCDLKH 137


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 2    PCDLPHNAL 10
            PCD  HN +
Sbjct: 1290 PCDTFHNRI 1298


>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989

Query: 3  CDLPHNAL 10
          CD PH  L
Sbjct: 68 CDSPHRIL 75


>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986

Query: 3  CDLPHNAL 10
          CD PH  L
Sbjct: 52 CDSPHRIL 59


>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong

Query: 3  CDLPHNAL 10
          CD PH  L
Sbjct: 68 CDSPHRIL 75


>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980

Query: 3  CDLPHNAL 10
          CD PH  L
Sbjct: 68 CDSPHRIL 75


>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979

Query: 3  CDLPHNAL 10
          CD PH  L
Sbjct: 52 CDSPHRIL 59


>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977

Query: 3  CDLPHNAL 10
          CD PH  L
Sbjct: 68 CDSPHRIL 75


>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   IPCDLPHNA 9
           +P +LPH A
Sbjct: 136 VPEELPHTA 144


>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   IPCDLPHNA 9
           +P +LPH A
Sbjct: 136 VPEELPHTA 144


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1    IPCDLP 6
            IPC LP
Sbjct: 2116 IPCQLP 2121


>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978

Query: 3  CDLPHNAL 10
          CD PH  L
Sbjct: 68 CDNPHRIL 75


>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978

Query: 3  CDLPHNAL 10
          CD PH  L
Sbjct: 68 CDNPHRIL 75


>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977

Query: 3  CDLPHNAL 10
          CD PH  L
Sbjct: 68 CDNPHRIL 75


>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976

Query: 3  CDLPHNAL 10
          CD PH  L
Sbjct: 68 CDNPHRIL 75


>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975

Query: 3  CDLPHNAL 10
          CD PH  L
Sbjct: 68 CDNPHRIL 75


>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)

Query: 2   PCDLPHNA 9
           P DLPH A
Sbjct: 137 PTDLPHLA 144


>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)

Query: 2   PCDLPHNA 9
           P DLPH A
Sbjct: 136 PADLPHLA 143


>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)

Query: 2   PCDLPHNA 9
           P DLPH A
Sbjct: 137 PTDLPHLA 144


>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)

Query: 2   PCDLPHNA 9
           P DLPH A
Sbjct: 136 PADLPHLA 143


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1    IPCDLP 6
            +PC LP
Sbjct: 2116 VPCQLP 2121


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1    IPCDLP 6
            +PC LP
Sbjct: 2116 VPCQLP 2121


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)

Query: 3   CDLPHNAL 10
           CDLP + L
Sbjct: 417 CDLPESHL 424


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 3   CDLPHNAL 10
           CDLP + L
Sbjct: 417 CDLPESHL 424


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 3   CDLPHNAL 10
           CDLP + L
Sbjct: 417 CDLPESHL 424


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 3   CDLPHNAL 10
           CDLP + L
Sbjct: 417 CDLPESHL 424


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1    IPCDLP 6
            IP DLP
Sbjct: 1618 IPIDLP 1623


>sp|C_VSNJO|PROTEIN C'|Vesicular stomatitis New Jersey virus

Query: 1  IPCDLPHN 8
          +PC +P N
Sbjct: 6  LPCRMPMN 13


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 1    IPCDLP 6
            +PC LP
Sbjct: 2116 VPCQLP 2121


>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35

Query: 2  PCDLP 6
          PCD P
Sbjct: 55 PCDQP 59


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 3   CDLPHNAL 10
           CDLP + L
Sbjct: 418 CDLPESHL 425


>sp|E321_ADE07|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 7

Query: 2  PCDLP 6
          PCD P
Sbjct: 54 PCDQP 58


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 3   CDLPHNAL 10
           CDLP + L
Sbjct: 418 CDLPESHL 425


>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11

Query: 2  PCDLP 6
          PCD P
Sbjct: 55 PCDQP 59


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 4    DLPHNAL 10
            +LPH AL
Sbjct: 1499 NLPHRAL 1505


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 4    DLPHNAL 10
            +LPH AL
Sbjct: 1499 NLPHRAL 1505


>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11

Query: 2  PCDLP 6
          PCD P
Sbjct: 55 PCDQP 59


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1   IPCDLPH 7
           +P D+PH
Sbjct: 414 LPADIPH 420


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1   IPCDLPH 7
           +P D+PH
Sbjct: 414 LPADIPH 420


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1   IPCDLPH 7
           +P D+PH
Sbjct: 414 LPADIPH 420


>sp|E321_ADE03|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 3

Query: 2  PCDLP 6
          PCD P
Sbjct: 54 PCDQP 58


>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)

Query: 2   PCDLPH 7
           PC  PH
Sbjct: 461 PCPKPH 466


>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 1   IPCDLPH 7
           +P D+PH
Sbjct: 414 LPADIPH 420


>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1

Query: 1   IPCDLPH 7
           +P D+PH
Sbjct: 414 LPADIPH 420


>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1

Query: 1   IPCDLPH 7
           +P D+PH
Sbjct: 414 LPADIPH 420


>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1

Query: 1   IPCDLPH 7
           +P D+PH
Sbjct: 414 LPADIPH 420


>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1

Query: 1   IPCDLPH 7
           +P D+PH
Sbjct: 414 LPADIPH 420


>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 1   IPCDLPH 7
           +P D+PH
Sbjct: 414 LPADIPH 420


>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 1   IPCDLPH 7
           +P D+PH
Sbjct: 414 LPADIPH 420


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 2   PCDLP 6
           PC LP
Sbjct: 971 PCQLP 975


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2    PCDLPHNAL 10
            PC    NAL
Sbjct: 1291 PCQFLQNAL 1299


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 2    PCDLPHNAL 10
            PC    NAL
Sbjct: 1291 PCQFLQNAL 1299


>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 2   PCDLP 6
           PCD P
Sbjct: 272 PCDAP 276




26|SequenceR|135|126|GGQDCIPCDL

>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   GGQDCIPCD 9
           GG+D +PC+
Sbjct: 460 GGKDDLPCE 468


>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)

Query: 4   DCIPCDL 10
           DC+ CDL
Sbjct: 254 DCLCCDL 260


>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)

Query: 4   DCIPCDL 10
           DC+ CDL
Sbjct: 254 DCLCCDL 260


>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P

Query: 3   QDCIPC 8
           Q CIPC
Sbjct: 147 QPCIPC 152


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 2   GQDCIPCDL 10
           GQ  +PC+L
Sbjct: 493 GQTDVPCNL 501


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 2   GQDCIPCDL 10
           GQ  +PC+L
Sbjct: 493 GQTDVPCNL 501


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 5    CIPCDL 10
            CI CDL
Sbjct: 1151 CIKCDL 1156


Query: 4    DCIPCD 9
            +CI CD
Sbjct: 2439 NCIDCD 2444


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 5    CIPCDL 10
            CI CDL
Sbjct: 1151 CIKCDL 1156


Query: 4    DCIPCD 9
            +CI CD
Sbjct: 2439 NCIDCD 2444


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 2   GQDCIPC 8
           G D IPC
Sbjct: 890 GPDVIPC 896


>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9

Query: 5   CIPC 8
           CIPC
Sbjct: 161 CIPC 164


>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22

Query: 5   CIPC 8
           CIPC
Sbjct: 161 CIPC 164


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 5   CIPCD 9
           C+PC+
Sbjct: 226 CVPCE 230


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 5   CIPCD 9
           C+PC+
Sbjct: 226 CVPCE 230


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 5   CIPCD 9
           C+PC+
Sbjct: 226 CVPCE 230


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 5   CIPCD 9
           C+PC+
Sbjct: 226 CVPCE 230


>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3  QDCIPCD 9
          Q C+P D
Sbjct: 63 QACVPTD 69


>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3  QDCIPCD 9
          Q C+P D
Sbjct: 61 QACVPTD 67


>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3  QDCIPCD 9
          Q C+P D
Sbjct: 73 QACVPTD 79


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3  QDCIPCD 9
          Q C+P D
Sbjct: 71 QACVPTD 77


>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3  QDCIPCD 9
          Q C+P D
Sbjct: 72 QACVPTD 78


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 5   CIPC 8
           CIPC
Sbjct: 226 CIPC 229


>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37

Query: 5   CIPC 8
           C+PC
Sbjct: 161 CVPC 164


>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17

Query: 5   CIPC 8
           C+PC
Sbjct: 161 CVPC 164


>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15

Query: 5   CIPC 8
           C+PC
Sbjct: 161 CVPC 164


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 5   CIPCD 9
           C+PC+
Sbjct: 226 CVPCE 230


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 5   CIPCD 9
           C+PC+
Sbjct: 226 CVPCE 230


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 5   CIPC 8
           CIPC
Sbjct: 226 CIPC 229


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 5   CIPC 8
           CIPC
Sbjct: 283 CIPC 286


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1   GGQDCIPCD 9
           G Q+C P +
Sbjct: 877 GSQECTPTN 885


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 5   CIPC 8
           CIPC
Sbjct: 283 CIPC 286


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1   GGQDCIP 7
           G Q+C P
Sbjct: 876 GSQECTP 882


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1   GGQDCIP 7
           G Q+C P
Sbjct: 876 GSQECTP 882


>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)

Query: 5   CIPCD 9
           C+PC+
Sbjct: 226 CVPCE 230


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1   GGQDCIP 7
           G Q+C P
Sbjct: 876 GSQECTP 882


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1   GGQDCIP 7
           G Q+C P
Sbjct: 877 GSQECTP 883


>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)

Query: 5   CIPCD 9
           C+PC+
Sbjct: 226 CVPCE 230


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 5   CIPCDL 10
           C+PC L
Sbjct: 226 CVPCVL 231


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 4    DCIPC 8
            DCI C
Sbjct: 2157 DCIAC 2161


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 4    DCIPC 8
            DCI C
Sbjct: 2157 DCIAC 2161


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3   QDCIPC 8
           +DC+ C
Sbjct: 672 KDCVKC 677


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3   QDCIPC 8
           +DC+ C
Sbjct: 672 KDCVKC 677


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 4    DCIPCD 9
            +C+ CD
Sbjct: 2420 NCVDCD 2425


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 5   CIPC 8
           C+PC
Sbjct: 290 CVPC 293


>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)

Query: 5   CIPC 8
           C+PC
Sbjct: 98  CVPC 101


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 5   CIPC 8
           C+PC
Sbjct: 290 CVPC 293


>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)

Query: 5   CIPC 8
           C+PC
Sbjct: 110 CVPC 113


>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 4    DCIPCD 9
            +C+ CD
Sbjct: 2420 NCVDCD 2425


>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)

Query: 5   CIPC 8
           C+PC
Sbjct: 110 CVPC 113


>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)

Query: 5   CIPC 8
           C+PC
Sbjct: 226 CVPC 229




27|SequenceR|140|131|QLDCEGGQDC

>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 2    LDCEGGQDC 10
            LDC   +DC
Sbjct: 2101 LDCGSKEDC 2109


>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   LDCEGGQDC 10
           L C GG+ C
Sbjct: 200 LGCTGGRRC 208


Query: 5   EGGQD 9
           EGGQD
Sbjct: 869 EGGQD 873


>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   LDCEGGQDC 10
           L C GG+ C
Sbjct: 200 LGCTGGRRC 208


Query: 5   EGGQD 9
           EGGQD
Sbjct: 878 EGGQD 882


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 4  CEGGQD 9
          CE GQD
Sbjct: 92 CEDGQD 97


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 4  CEGGQD 9
          CE GQD
Sbjct: 92 CEDGQD 97


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 2   LDCEGGQ 8
           +DC GGQ
Sbjct: 648 VDCSGGQ 654


>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P

Query: 4   CEGGQDC 10
           C+G +DC
Sbjct: 293 CDGDRDC 299


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 5   EGGQDC 10
           EGG++C
Sbjct: 915 EGGREC 920


>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5   EGGQD 9
           EGGQD
Sbjct: 859 EGGQD 863


>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)

Query: 5   EGGQDC 10
           E G+DC
Sbjct: 489 EAGEDC 494


>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)

Query: 5   EGGQDC 10
           E G+DC
Sbjct: 489 EAGEDC 494


>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)

Query: 5   EGGQDC 10
           E G+DC
Sbjct: 489 EAGEDC 494


>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 5   EGGQDC 10
           E G+DC
Sbjct: 489 EAGEDC 494


>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 5   EGGQDC 10
           E G+DC
Sbjct: 489 EAGEDC 494


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   LDCEGGQDC 10
           + C G Q+C
Sbjct: 873 IKCCGSQEC 881


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   LDCEGGQDC 10
           + C G Q+C
Sbjct: 872 IKCCGSQEC 880


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   LDCEGGQDC 10
           + C G Q+C
Sbjct: 873 IKCCGSQEC 881


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   LDCEGGQDC 10
           + C G Q+C
Sbjct: 872 IKCCGSQEC 880


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   LDCEGGQDC 10
           + C G Q+C
Sbjct: 872 IKCCGSQEC 880


>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)

Query: 3   DCEGGQDC 10
           DCE  ++C
Sbjct: 173 DCESIKNC 180


>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)

Query: 5   EGGQDC 10
           E G+DC
Sbjct: 489 EAGKDC 494


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 3   DCEGGQDC 10
           DC  GQ C
Sbjct: 353 DCGDGQFC 360


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 3   DCEGGQDC 10
           DC  GQ C
Sbjct: 353 DCGDGQFC 360


>sp|NSP5_ROTB2|NON-STRUCTURAL protein 5|Rotavirus X (isolate

Query: 1  QLDCE 5
          Q+DCE
Sbjct: 34 QIDCE 38


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 5    EGGQDC 10
            E G+DC
Sbjct: 2066 EAGRDC 2071


>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60

Query: 4  CEGGQDC 10
          C+ G DC
Sbjct: 20 CQLGADC 26


>sp|NSP5_ROTJ1|NON-STRUCTURAL protein 5|Rotavirus X (strain

Query: 1  QLDCE 5
          Q+DCE
Sbjct: 34 QIDCE 38


>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35

Query: 3  DCEGGQD 9
          DC+ G+D
Sbjct: 41 DCDRGED 47




28|SequenceR|145|136|MMSQDQLDCE

>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human

Query: 3   SQDQLDCE 10
           +Q+Q DC+
Sbjct: 212 TQNQADCQ 219


>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)

Query: 3   SQDQLDCE 10
           +Q+Q DC+
Sbjct: 222 TQNQADCQ 229




29|SequenceR|150|141|RDNGFMMSQD

>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2    DNGFMMSQ 9
            DNG M+S+
Sbjct: 1131 DNGAMLSE 1138


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2    DNGFMMSQ 9
            DNG M+S+
Sbjct: 1131 DNGAMLSE 1138


>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940

Query: 2   DNGFMMSQD 10
           D+ F M QD
Sbjct: 384 DSNFFMKQD 392


>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)

Query: 2   DNGFMMSQD 10
           DN  +MS+D
Sbjct: 632 DNELIMSRD 640


>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   DNGFMMSQD 10
           DN  +MS+D
Sbjct: 632 DNELIMSRD 640


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1   RDNGFMMSQ 9
           ++NG +M+Q
Sbjct: 589 KENGVVMNQ 597


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1   RDNGFMMSQ 9
           ++NG +M+Q
Sbjct: 589 KENGVVMNQ 597


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 2   DNGFMM 7
           +NG+MM
Sbjct: 765 ENGYMM 770


>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007

Query: 2   DNGFMMSQD 10
           DN F + QD
Sbjct: 384 DNDFSVKQD 392




30|SequenceR|155|146|ELFRSRDNGF

>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   ELFRSRDNGF 10
           E FR+ DN F
Sbjct: 264 EAFRNSDNHF 273


>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   ELFRSRDNGF 10
           E FR+ DN F
Sbjct: 264 EAFRNSDNHF 273


>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   ELFRSRDNGF 10
           E FR+ DN F
Sbjct: 264 EAFRNSDNHF 273


>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)

Query: 3   FRSRDNGF 10
           FR+R +GF
Sbjct: 215 FRARGDGF 222


>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 1   ELFRSRDN 8
           ELF SR N
Sbjct: 226 ELFVSRSN 233


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 2   LFRSRDNGF 10
           L+ S+D+GF
Sbjct: 399 LYISKDSGF 407


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    ELFRSRDNG 9
            +LFR+  NG
Sbjct: 6584 DLFRNARNG 6592


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    ELFRSRDNG 9
            +LFR+  NG
Sbjct: 6561 DLFRNARNG 6569




31|SequenceR|160|151|VARKGELFRS

>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   ARKGELF 8
           AR+GELF
Sbjct: 383 AREGELF 389


>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   ARKGELF 8
           AR+GELF
Sbjct: 383 AREGELF 389


>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   RKGELFRS 10
           R GE+F+S
Sbjct: 324 RHGEVFKS 331


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 5   GELFRS 10
           G+LFRS
Sbjct: 633 GDLFRS 638




32|SequenceR|165|156|INKDEVARKG

>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 4    DEVARKG 10
            +EVARKG
Sbjct: 3009 EEVARKG 3015


>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37

Query: 1   INKDEVA 7
           IN+DE+A
Sbjct: 330 INEDEIA 336


>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   NKDEVAR 8
           ++DEVAR
Sbjct: 296 DRDEVAR 302


>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   NKDEVAR 8
           ++DEVAR
Sbjct: 296 DRDEVAR 302




33|SequenceR|170|161|KVLPGINKDE

>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 3   LPGINKD 9
            PGIN D
Sbjct: 486 FPGINAD 492


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 3   LPGINKD 9
            PGIN D
Sbjct: 486 FPGINAD 492


>sp|VNB_INBVI|GLYCOPROTEIN NB|Influenza B virus (strain B/Victoria/3/1985)

Query: 2  VLPGINKDE 10
          +LPG+N  E
Sbjct: 87 ILPGLNLSE 95


>sp|VNB_INBLE|GLYCOPROTEIN NB|Influenza B virus (strain B/Lee/1940)

Query: 2  VLPGINKDE 10
          +LPG+N  E
Sbjct: 88 ILPGLNLSE 96


>sp|VNB_INBSI|GLYCOPROTEIN NB|Influenza B virus (strain B/Singapore/222/1979)

Query: 2  VLPGINKDE 10
          +LPG+N  E
Sbjct: 88 ILPGLNLSE 96


>sp|VNB_INBHK|GLYCOPROTEIN NB|Influenza B virus (strain B/Hong

Query: 2  VLPGINKDE 10
          +LPG+N  E
Sbjct: 88 ILPGLNLSE 96


>sp|VNB_INBME|GLYCOPROTEIN NB|Influenza B virus (strain B/Memphis/6/1986)

Query: 2  VLPGINKDE 10
          +LPG+N  E
Sbjct: 87 ILPGLNLSE 95


>sp|VNB_INBMD|GLYCOPROTEIN NB|Influenza B virus (strain B/Maryland/1959)

Query: 2  VLPGINKDE 10
          +LPG+N  E
Sbjct: 88 ILPGLNLSE 96


>sp|VNB_INBLN|GLYCOPROTEIN NB|Influenza B virus (strain B/Leningrad/179/1986)

Query: 2  VLPGINKDE 10
          +LPG+N  E
Sbjct: 87 ILPGLNLSE 95


>sp|VNB_INBUS|GLYCOPROTEIN NB|Influenza B virus (strain B/USSR/100/1983)

Query: 2  VLPGINKDE 10
          +LPG+N  E
Sbjct: 88 ILPGLNLSE 96


>sp|VNB_INBMF|GLYCOPROTEIN NB|Influenza B virus (strain B/Memphis/3/1989)

Query: 2  VLPGINKDE 10
          +LPG+N  E
Sbjct: 87 ILPGLNLSE 95


>sp|VNB_INBBE|GLYCOPROTEIN NB|Influenza B virus (strain B/Beijing/1/1987)

Query: 2  VLPGINKDE 10
          +LPG+N  E
Sbjct: 87 ILPGLNLSE 95


>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4

Query: 4   PGINKDE 10
           PG+N D+
Sbjct: 360 PGMNADQ 366


>sp|US02_HHV11|PROTEIN US2|Human herpesvirus 1 (strain 17)

Query: 2   VLPGINKDE 10
           VLPG N  E
Sbjct: 202 VLPGTNGRE 210


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 2   VLPGINKD 9
           V PG +KD
Sbjct: 957 VTPGTSKD 964


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 2   VLPGINKD 9
           V PG +KD
Sbjct: 957 VTPGTSKD 964


>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)

Query: 4  PGINKDE 10
          PG+  DE
Sbjct: 26 PGVGNDE 32


>sp|VNB_INBOR|GLYCOPROTEIN NB|Influenza B virus (strain B/Oregon/5/1980)

Query: 2  VLPGIN 7
          +LPG+N
Sbjct: 88 ILPGLN 93


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 2  VLPGIN 7
          V+PG+N
Sbjct: 62 VVPGVN 67




34|SequenceR|175|166|RTMITKVLPG

>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2    TMITKVLPG 10
            T+ TK++PG
Sbjct: 5185 TVTTKLVPG 5193


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2    TMITKVLPG 10
            T  TK++PG
Sbjct: 5210 TATTKLVPG 5218


>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3  MITKVLPG 10
          +IT+V+PG
Sbjct: 73 VITRVIPG 80


>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3  MITKVLPG 10
          ++TK++PG
Sbjct: 81 ILTKIVPG 88


>sp|PG159_VACCC|PROTEIN OPG159|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   RTMITKV 7
           RT++TKV
Sbjct: 106 RTIVTKV 112




35|SequenceR|180|171|TCQICRTMIT

>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1

Query: 2   CQICRTMI 9
           C++CRT++
Sbjct: 140 CKMCRTVL 147


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1    TCQICRTMI 9
            TC IC++ +
Sbjct: 1756 TCDICKSTV 1764


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1    TCQICRTMI 9
            TC IC++ +
Sbjct: 1756 TCDICKSTV 1764


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 2    CQICRTM 8
            CQI RT+
Sbjct: 1125 CQISRTL 1131


Query: 1    TCQICRT 7
            +C+IC T
Sbjct: 1801 SCRICTT 1807


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 1    TCQICRTM 8
            TC  C+T+
Sbjct: 1198 TCHTCQTI 1205


>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3

Query: 2   CQICRTMI 9
           C++C T+I
Sbjct: 137 CKMCMTVI 144


>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)

Query: 1   TCQICRTMI 9
           TC+ C++++
Sbjct: 598 TCEFCQSVV 606


>sp|NSP3_ROTJ1|NON-STRUCTURAL protein 3|Rotavirus X (strain

Query: 2  CQICRTMI 9
          C++ RTMI
Sbjct: 27 CRMFRTMI 34


>sp|TAT_HV1MN|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 2  CQICRT 7
          CQ+C T
Sbjct: 34 CQVCFT 39


>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P

Query: 2  CQIC 5
          CQIC
Sbjct: 50 CQIC 53


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 2    CQIC 5
            CQIC
Sbjct: 1236 CQIC 1239


>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   TCQICRTMI 9
           TC+ C++++
Sbjct: 598 TCEFCQSVV 606


>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)

Query: 1   TCQICRTMI 9
           TC+ C++++
Sbjct: 598 TCEFCQSVV 606


>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P

Query: 2  CQICRTM 8
          CQ+CR +
Sbjct: 56 CQMCRVI 62


>sp|GN_HHV11|ENVELOPE glycoprotein N|Human herpesvirus 1 (strain 17)

Query: 2  CQICRTMI 9
          CQIC+ ++
Sbjct: 79 CQICQRLL 86


>sp|TAT_HV1Y2|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 2  CQICRT 7
          CQ+C T
Sbjct: 34 CQVCFT 39


>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)

Query: 1   TCQICRTMI 9
           TC +C T +
Sbjct: 162 TCPLCNTPV 170


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    QICRTM 8
            Q+CRT+
Sbjct: 2059 QLCRTV 2064


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    QICRTM 8
            Q+CRT+
Sbjct: 2059 QLCRTV 2064


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    QICRTM 8
            Q+CRT+
Sbjct: 2059 QLCRTV 2064


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    QICRTM 8
            Q+CRT+
Sbjct: 2059 QLCRTV 2064


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    QICRTM 8
            Q+CRT+
Sbjct: 2059 QLCRTV 2064


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 2    CQICR 6
            C++CR
Sbjct: 1037 CELCR 1041


>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 628 KVCRTLL 634


>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 631 KVCRTLL 637


>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 628 KVCRTLL 634


>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 612 KVCRTLL 618


>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I01A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 158 KVCRTLL 164


>sp|PA_I01A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 158 KVCRTLL 164


>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31

Query: 3   QICRTMI 9
           ++CRT++
Sbjct: 635 KVCRTLL 641


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 2    CQICR 6
            C++CR
Sbjct: 1037 CELCR 1041


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 2    CQICR 6
            C++CR
Sbjct: 1037 CELCR 1041


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 2    CQICR 6
            C++CR
Sbjct: 1037 CELCR 1041


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 2    CQICR 6
            C++CR
Sbjct: 1037 CELCR 1041


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 2    CQICR 6
            C++CR
Sbjct: 1037 CELCR 1041


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 2    CQICR 6
            C++CR
Sbjct: 1037 CELCR 1041


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 2    CQICR 6
            C++CR
Sbjct: 1037 CELCR 1041


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 2    CQICR 6
            C++CR
Sbjct: 1037 CELCR 1041


>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)

Query: 2   CQICRT 7
           C+ CRT
Sbjct: 276 CEQCRT 281


>sp|GLRX1_VACCT|GLUTAREDOXIN-1 virus (strain Tian Tan)

Query: 1  TCQICRTMI 9
          TC  CR  +
Sbjct: 22 TCPFCRNAL 30


>sp|GLRX1_VACCP|GLUTAREDOXIN-1 virus (strain L-IVP) (VACV)

Query: 1  TCQICRTMI 9
          TC  CR  +
Sbjct: 22 TCPFCRNAL 30


>sp|GLRX1_VACCC|GLUTAREDOXIN-1 virus (strain Copenhagen) (VACV)

Query: 1  TCQICRTMI 9
          TC  CR  +
Sbjct: 22 TCPFCRNAL 30


>sp|GLRX1_VACCA|GLUTAREDOXIN-1 virus (strain Ankara) (VACV)

Query: 1  TCQICRTMI 9
          TC  CR  +
Sbjct: 22 TCPFCRNAL 30


>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2   CQICRT 7
           C+ CRT
Sbjct: 276 CEQCRT 281


>sp|GLRX1_MONPV|GLUTAREDOXIN-1 virus (MPXV)

Query: 1  TCQICRTMI 9
          TC  CR  +
Sbjct: 22 TCPFCRNAL 30


>sp|GLRX1_CWPXG|GLUTAREDOXIN-1 virus (strain GRI-90 /

Query: 1  TCQICRTMI 9
          TC  CR  +
Sbjct: 22 TCPFCRNAL 30


>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)

Query: 2   CQICRT 7
           C+ CRT
Sbjct: 276 CEQCRT 281


>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)

Query: 2   CQICRT 7
           C+ CRT
Sbjct: 276 CEQCRT 281


>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)

Query: 2   CQICRT 7
           C+ CRT
Sbjct: 276 CEQCRT 281


>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 2   CQICRT 7
           C+ CRT
Sbjct: 276 CEQCRT 281


>sp|GLRX1_CWPXB|GLUTAREDOXIN-1 virus (strain Brighton Red)

Query: 1  TCQICRTMI 9
          TC  CR  +
Sbjct: 22 TCPFCRNAL 30


>sp|GLRX1_VARV|GLUTAREDOXIN-1 virus

Query: 1  TCQICRTMI 9
          TC  CR  +
Sbjct: 22 TCPFCRNAL 30


>sp|GLRX1_VAR67|GLUTAREDOXIN-1 virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1  TCQICRTMI 9
          TC  CR  +
Sbjct: 22 TCPFCRNAL 30


>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain

Query: 1  TCQICRTMIT 10
          TC IC + ++
Sbjct: 18 TCTICMSTVS 27


>sp|TAT_HV1BR|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 2  CQICRT 7
          CQ+C T
Sbjct: 34 CQVCFT 39




36|SequenceR|185|176|FRICRTCQIC

>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 4    CRTCQI 9
            CRTC++
Sbjct: 1090 CRTCEL 1095


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 4    CRTCQI 9
            CRTC++
Sbjct: 1092 CRTCEL 1097


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 4    CRTCQI 9
            CRTC++
Sbjct: 1092 CRTCEL 1097


>sp|HBSAG_HBVCJ|LARGE envelope protein|Hepatitis B virus genotype C

Query: 4   CRTCQI 9
           CRTC I
Sbjct: 295 CRTCTI 300


>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C

Query: 4   CRTCQI 9
           CRTC I
Sbjct: 295 CRTCTI 300


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    FRICRTCQ 8
            FR  R CQ
Sbjct: 1273 FRFSRVCQ 1280


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 1    FRICRTCQ 8
            FR  R CQ
Sbjct: 1273 FRFTRVCQ 1280


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    FRICRTCQ 8
            FR  R CQ
Sbjct: 1273 FRFSRVCQ 1280


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    FRICRTCQ 8
            FR  R CQ
Sbjct: 1273 FRFSRVCQ 1280


>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1   FRICRTCQIC 10
           FR+C T   C
Sbjct: 660 FRLCSTMAAC 669


>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain

Query: 1   FRICRTCQI 9
           FRI  TC +
Sbjct: 97  FRIIMTCNV 105


>sp|TAT_HV1OY|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 2  RICRTCQIC 10
          R C  CQ+C
Sbjct: 29 RCCLHCQVC 37


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 5    RTCQIC 10
            R CQ+C
Sbjct: 1118 RPCQLC 1123


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 4    CRTCQI 9
            CRTC +
Sbjct: 1090 CRTCTL 1095


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1    FRICR 5
            FRICR
Sbjct: 3442 FRICR 3446


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    FRICR 5
            FRICR
Sbjct: 3442 FRICR 3446


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 4    CRTC 7
            CRTC
Sbjct: 2954 CRTC 2957


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 4    CRTC 7
            CRTC
Sbjct: 2954 CRTC 2957


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 4    CRTC 7
            CRTC
Sbjct: 2954 CRTC 2957


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 4    CRTC 7
            CRTC
Sbjct: 2954 CRTC 2957


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 4    CRTC 7
            CRTC
Sbjct: 2954 CRTC 2957


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 4    CRTC 7
            CRTC
Sbjct: 2954 CRTC 2957


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 4    CRTC 7
            CRTC
Sbjct: 2947 CRTC 2950


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 4    CRTC 7
            CRTC
Sbjct: 2978 CRTC 2981


>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E

Query: 4   CRTC 7
           CRTC
Sbjct: 294 CRTC 297


>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E

Query: 4   CRTC 7
           CRTC
Sbjct: 294 CRTC 297


>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E

Query: 4   CRTC 7
           CRTC
Sbjct: 294 CRTC 297


>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D

Query: 4   CRTC 7
           CRTC
Sbjct: 284 CRTC 287


>sp|HBSAG_HBVA8|LARGE envelope protein|Hepatitis B virus genotype A3

Query: 4   CRTC 7
           CRTC
Sbjct: 295 CRTC 298


>sp|HBSAG_HBVC5|LARGE envelope protein|Hepatitis B virus genotype C

Query: 4   CRTCQI 9
           C+TC I
Sbjct: 295 CKTCTI 300


>sp|HBSAG_HBVC3|LARGE envelope protein|Hepatitis B virus genotype C

Query: 4   CRTCQI 9
           C+TC I
Sbjct: 295 CKTCTI 300


>sp|HBSAG_HBVC2|LARGE envelope protein|Hepatitis B virus genotype C

Query: 4   CRTCQI 9
           C+TC I
Sbjct: 295 CKTCTI 300


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 3   ICRTCQI 9
           IC+TC I
Sbjct: 893 ICKTCSI 899


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 2    RICRTCQ 8
            + C TCQ
Sbjct: 1197 QTCHTCQ 1203


>sp|HBSAG_HBVC8|LARGE envelope protein|Hepatitis B virus genotype C

Query: 4   CRTCQI 9
           C+TC I
Sbjct: 284 CKTCTI 289


>sp|HBSAG_HBVC4|LARGE envelope protein|Hepatitis B virus genotype C

Query: 4   CRTCQI 9
           C+TC I
Sbjct: 295 CKTCTI 300


>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D

Query: 4   CRTC 7
           CRTC
Sbjct: 284 CRTC 287


>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D

Query: 4   CRTC 7
           CRTC
Sbjct: 284 CRTC 287


>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D

Query: 4   CRTC 7
           CRTC
Sbjct: 284 CRTC 287


>sp|HBSAG_HBVD1|LARGE envelope protein|Hepatitis B virus genotype D

Query: 4   CRTC 7
           CRTC
Sbjct: 284 CRTC 287


>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C

Query: 4   CRTC 7
           CRTC
Sbjct: 295 CRTC 298


>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D

Query: 4   CRTC 7
           CRTC
Sbjct: 284 CRTC 287


>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3

Query: 4   CRTC 7
           CRTC
Sbjct: 295 CRTC 298


>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)

Query: 1   FRICRTCQIC 10
           +R CR  ++C
Sbjct: 316 YRQCRDQELC 325


>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   RICRTCQ 8
           R C +CQ
Sbjct: 820 RACESCQ 826


>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   RICRTCQ 8
           R C +CQ
Sbjct: 820 RACESCQ 826


>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   RICRTCQ 8
           R C +CQ
Sbjct: 820 RACESCQ 826


>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)

Query: 1   FRICRTCQIC 10
           +R CR  ++C
Sbjct: 316 YRQCRDQELC 325


>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 3   ICRTCQ 8
           IC TC+
Sbjct: 147 ICATCE 152


>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 3   ICRTCQ 8
           IC TC+
Sbjct: 147 ICATCE 152


>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983

Query: 3   ICRTCQ 8
           IC TC+
Sbjct: 147 ICATCE 152


>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980

Query: 3   ICRTCQ 8
           IC TC+
Sbjct: 147 ICATCE 152


>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977

Query: 3   ICRTCQ 8
           IC TC+
Sbjct: 147 ICATCE 152


>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978

Query: 3   ICRTCQ 8
           IC TC+
Sbjct: 147 ICATCE 152


>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 3   ICRTCQ 8
           IC TC+
Sbjct: 144 ICATCE 149


>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New

Query: 3   ICRTCQ 8
           IC TC+
Sbjct: 147 ICATCE 152


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 4    CRTCQI 9
            CR C++
Sbjct: 1090 CRACEL 1095


>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)

Query: 1  FRICRTCQIC 10
          F IC   ++C
Sbjct: 36 FNICVHLEVC 45


>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)

Query: 1  FRICRTCQIC 10
          F IC   ++C
Sbjct: 36 FNICVHLEVC 45


>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)

Query: 1  FRICRTCQIC 10
          F IC   ++C
Sbjct: 36 FNICVHLEVC 45


>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann

Query: 1  FRICRTCQIC 10
          F IC   ++C
Sbjct: 36 FNICVHLEVC 45


>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann

Query: 1  FRICRTCQIC 10
          F IC   ++C
Sbjct: 36 FNICVHLEVC 45


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 3  ICRTC 7
          +C+TC
Sbjct: 48 LCKTC 52


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 3  ICRTC 7
          +C+TC
Sbjct: 48 LCKTC 52


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3  ICRTC 7
          +C+TC
Sbjct: 48 LCKTC 52


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 3  ICRTC 7
          +C+TC
Sbjct: 48 LCKTC 52


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 3  ICRTC 7
          +C+TC
Sbjct: 48 LCKTC 52


>sp|UL56_HHV1E|PROTEIN UL56|Human herpesvirus 1 (strain HFEM)

Query: 4  CRTCQ 8
          CR CQ
Sbjct: 57 CRPCQ 61


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3    ICRTC 7
            +C+TC
Sbjct: 1751 VCKTC 1755


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 4    CRTCQI 9
            C TC++
Sbjct: 1178 CHTCKV 1183


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 4    CRTCQI 9
            C TC++
Sbjct: 1178 CHTCKV 1183


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3    ICRTC 7
            +C+TC
Sbjct: 1751 VCKTC 1755


>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P

Query: 4  CRTCQI 9
          CR CQ+
Sbjct: 52 CRVCQL 57


>sp|DR5_HHV6U|UNCHARACTERIZED protein DR5|Human herpesvirus 6A (strain Uganda-1102)

Query: 2  RICRTCQIC 10
          R+CR  ++C
Sbjct: 34 RLCRRGRVC 42


>sp|M1_I97A1|MATRIX protein 1|Influenza A virus (strain A/Hong

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I97A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I96A0|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I89A2|MATRIX protein 1|Influenza A virus (strain A/Beijing/353/1989

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I88A7|MATRIX protein 1|Influenza A virus (strain A/Wisconsin/3523/1988

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I88A5|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/17672/1988

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I88A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/8/1988

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I85A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Netherlands/12/1985

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I83A8|MATRIX protein 1|Influenza A virus (strain A/Hong

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I82A7|MATRIX protein 1|Influenza A virus (strain A/Swine/Hong

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I81A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Ontario/2/1981

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I80A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/4/1980

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I80A2|MATRIX protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I79A0|MATRIX protein 1|Influenza A virus (strain A/Bangkok/1/1979

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I78A8|MATRIX protein 1|Influenza A virus (strain A/Memphis/18/1978

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I78A7|MATRIX protein 1|Influenza A virus (strain A/Memphis/2/1978

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I78A3|MATRIX protein 1|Influenza A virus (strain A/Mallard/New

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I77AC|MATRIX protein 1|Influenza A virus (strain A/Swine/Tennessee/24/1977

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I77A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I76A6|MATRIX protein 1|Influenza A virus (strain A/Memphis/110/1976

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I75A0|MATRIX protein 1|Influenza A virus (strain A/Beijing/39/1975

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I73A5|MATRIX protein 1|Influenza A virus (strain A/Port

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I72A8|MATRIX protein 1|Influenza A virus (strain A/Udorn/1972

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I72A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/101/1972

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I72A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/102/1972

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I72A2|MATRIX protein 1|Influenza A virus (strain A/Udorn/307/1972

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I71A1|MATRIX protein 1|Influenza A virus (strain A/Memphis/1/1971

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I70A0|MATRIX protein 1|Influenza A virus (strain A/Qu/7/1970

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I69A0|MATRIX protein 1|Influenza A virus (strain A/England/878/1969

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I68A6|MATRIX protein 1|Influenza A virus (strain A/Northern

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I68A4|MATRIX protein 1|Influenza A virus (strain A/Hong

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I68A0|MATRIX protein 1|Influenza A virus (strain A/Aichi/2/1968

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I67A2|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I67A0|MATRIX protein 1|Influenza A virus (strain A/Tokyo/3/1967

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I61A1|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I59A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I57A5|MATRIX protein 1|Influenza A virus (strain A/Singapore/1/1957

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I57A3|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I57A2|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I57A1|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/1957

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I57A0|MATRIX protein 1|Influenza A virus (strain A/Japan/305/1957

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I56A3|MATRIX protein 1|Influenza A virus (strain A/Equine/Prague/1/1956

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I54A1|MATRIX protein 1|Influenza A virus (strain A/Swine/May/1954

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I51A0|MATRIX protein 1|Influenza A virus (strain A/USA:Albany/12/1951

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I50A0|MATRIX protein 1|Influenza A virus (strain A/Fort

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I45A0|MATRIX protein 1|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I37A0|MATRIX protein 1|Influenza A virus (strain A/Swine/29/1937

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I36A0|MATRIX protein 1|Influenza A virus (strain A/Henry/1936

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I35A3|MATRIX protein 1|Influenza A virus (strain A/USA:Phila/1935

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I34A1|MATRIX protein 1|Influenza A virus (strain A/Puerto

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I33A0|MATRIX protein 1|Influenza A virus (strain A/Wilson-Smith/1933

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I30A0|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I18A0|MATRIX protein 1|Influenza A virus (strain A/Brevig

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I06A0|MATRIX protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I05A1|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I03A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I03A0|MATRIX protein 1|Influenza A virus (strain A/Hong

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I02A7|MATRIX protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 145 VCATCE 150


>sp|M1_I02A6|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I02A5|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I02A4|MATRIX protein 1|Influenza A virus (strain A/Silky

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I02A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I02A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I02A1|MATRIX protein 1|Influenza A virus (strain A/Guinea

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 140 VCATCE 145


>sp|M1_I02A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I01A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I01A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I01A0|MATRIX protein 1|Influenza A virus (strain A/Silky

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I00A0|MATRIX protein 1|Influenza A virus (strain A/Duck/Hong

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I000X|MATRIX protein 1|Influenza A virus (strain A/X-31

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152


>sp|M1_I000F|MATRIX protein 1|Influenza A virus (strain A/Chicken/Weybridge

Query: 3   ICRTCQ 8
           +C TC+
Sbjct: 147 VCATCE 152




37|SequenceR|190|181|AIESAFRICR

>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)

Query: 1  AIESAFRIC 9
          AIE A RIC
Sbjct: 51 AIEKAIRIC 59


>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)

Query: 1  AIESAFRIC 9
          AIE A RIC
Sbjct: 51 AIEKAIRIC 59


>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann

Query: 1  AIESAFRIC 9
          AIE A RIC
Sbjct: 51 AIEKAIRIC 59


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 2   IESAFRICR 10
           +E+AF +C+
Sbjct: 560 VETAFCVCK 568


>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)

Query: 1  AIESAFRIC 9
          A+++AF +C
Sbjct: 37 AVKTAFSVC 45


>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant

Query: 1  AIESAFRIC 9
          A+++AF +C
Sbjct: 37 AVKTAFSVC 45


>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  AIESAFRIC 9
          A+++AF +C
Sbjct: 37 AVKTAFSVC 45


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 1   AIESAFRIC 9
           A+E  F IC
Sbjct: 492 ALEQGFAIC 500


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1  AIESAFRICR 10
          A  + FR CR
Sbjct: 34 AASNGFRACR 43


>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain

Query: 2   IESAFRIC 9
           ++SAF +C
Sbjct: 375 VQSAFLVC 382


>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)

Query: 2   IESAFRIC 9
           ++SAF +C
Sbjct: 375 VQSAFLVC 382


>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain

Query: 2   IESAFRIC 9
           ++SAF +C
Sbjct: 375 VQSAFLVC 382


>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain

Query: 2   IESAFRIC 9
           ++SAF +C
Sbjct: 375 VQSAFLVC 382


>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)

Query: 2   IESAFRIC 9
           ++SAF +C
Sbjct: 375 VQSAFLVC 382


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 1   AIESAFRIC 9
           A+E  F IC
Sbjct: 492 ALEQGFAIC 500


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1  AIESAFRICR 10
          A  + FR CR
Sbjct: 34 AASNGFRACR 43


>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 1  AIESAFRIC 9
          A+E+  RIC
Sbjct: 53 ALETPARIC 61


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1  AIESAFRIC 9
          A+E+  RIC
Sbjct: 53 ALETPARIC 61


>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1

Query: 1  AIESAFRIC 9
          A+E+  RIC
Sbjct: 53 ALETPARIC 61




38|SequenceR|195|186|LDDVGAIESA

>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain

Query: 3   DVGAIES 9
           DVGA+E+
Sbjct: 231 DVGAVEA 237


>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain

Query: 3   DVGAIES 9
           DVGA+E+
Sbjct: 231 DVGAVEA 237


>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 3   DVGAIESA 10
           D+GAIE +
Sbjct: 727 DIGAIEDS 734


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 3   DVGAIESA 10
           D+GAIE +
Sbjct: 727 DIGAIEDS 734


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 3   DVGAIESA 10
           D+GAIE +
Sbjct: 727 DIGAIEDS 734


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    LDDVGAI 7
            LDD+G+I
Sbjct: 1752 LDDLGSI 1758




39|SequenceR|200|191|RGTTGLDDVG

>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1   RGTTGLDDV 9
           + TTG+DD+
Sbjct: 442 KKTTGVDDI 450


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 3   TTGLDDV 9
           TTG+DD+
Sbjct: 444 TTGVDDI 450


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank

Query: 3   TTGLDDV 9
           TTG+DD+
Sbjct: 444 TTGVDDI 450


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 3   TTGLDDV 9
           TTG+DD+
Sbjct: 445 TTGVDDL 451


>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)

Query: 4   TGLDDV 9
           TG+DDV
Sbjct: 195 TGMDDV 200


>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   RGTTGLD 7
           RG TG D
Sbjct: 420 RGATGFD 426


>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)

Query: 1   RGTTGLD 7
           RG +GLD
Sbjct: 428 RGASGLD 434


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 5   GLDDVG 10
           G+DD+G
Sbjct: 389 GIDDLG 394


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    GTTGLDDVG 10
            G T  DD+G
Sbjct: 1188 GATMTDDIG 1196


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    GTTGLDDVG 10
            G T  DD+G
Sbjct: 1188 GATMTDDIG 1196


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 2    GTTGLDDVG 10
            G T  DD+G
Sbjct: 1188 GATMTDDIG 1196


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    GTTGLDDVG 10
            G T  DD+G
Sbjct: 1188 GATMTDDIG 1196


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    GTTGLDDVG 10
            G T  DD+G
Sbjct: 1188 GATMTDDIG 1196


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    GTTGLDDVG 10
            G T  DD+G
Sbjct: 1188 GATMTDDIG 1196




40|SequenceR|205|196|QMDNGRGTTG

>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63

Query: 3   DNGRGTT 9
           DN RGTT
Sbjct: 340 DNTRGTT 346


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 3    DNGRGTTG 10
            D+G GT G
Sbjct: 2369 DSGHGTNG 2376


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 3   DNGRGTT 9
           DNG GT+
Sbjct: 332 DNGLGTS 338


>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   NGRGTTG 10
           NG GT+G
Sbjct: 421 NGGGTSG 427


>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   NGRGTTG 10
           NG GT+G
Sbjct: 421 NGGGTSG 427


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 2   MDNGRGTTG 10
           +DN + TTG
Sbjct: 438 LDNPKRTTG 446


>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)

Query: 5   GRGTTG 10
           GRG TG
Sbjct: 164 GRGATG 169


>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58

Query: 2  MDNGRGTTG 10
          MD+  GT G
Sbjct: 1  MDDPEGTNG 9


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 3   DNGRGTT 9
           + GRGTT
Sbjct: 150 ETGRGTT 156


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 3   DNGRGTT 9
           + GRGTT
Sbjct: 150 ETGRGTT 156




41|SequenceR|210|201|IYTGVQMDNG

>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2   YTGVQMDNG 10
           YTG+ +D G
Sbjct: 218 YTGIHLDKG 226


>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)

Query: 2   YTGVQMDNG 10
           YTG+ +D G
Sbjct: 218 YTGIHLDKG 226


>sp|VP30_MABVO|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2   YTGVQMDNG 10
           YTG+ +D G
Sbjct: 218 YTGIHLDKG 226


>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2   YTGVQMDNG 10
           YTG+ +D G
Sbjct: 218 YTGIHLDKG 226


>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2   YTGVQMDNG 10
           YTG+ +D G
Sbjct: 218 YTGIHLDKG 226


>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40

Query: 2   YTGVQMDNG 10
           Y GV+ DNG
Sbjct: 399 YQGVKTDNG 407


>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12

Query: 2   YTGVQMDNG 10
           Y G++ DNG
Sbjct: 394 YKGIKPDNG 402


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 2    YTGVQMDNG 10
            Y GV +D+G
Sbjct: 1062 YYGVDLDSG 1070


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 2    YTGVQMDNG 10
            Y GV +D+G
Sbjct: 1058 YYGVDLDSG 1066


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 2    YTGVQMDNG 10
            Y GV +D+G
Sbjct: 1057 YYGVDLDSG 1065


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 2    YTGVQMDNG 10
            Y GV +D+G
Sbjct: 1058 YYGVDLDSG 1066


>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)

Query: 1   IYTGVQMDNG 10
           +Y+ + M+NG
Sbjct: 405 VYSRIMMNNG 414


>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40

Query: 4   GVQMDNG 10
           G+QM NG
Sbjct: 284 GLQMSNG 290


>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41

Query: 4   GVQMDNG 10
           G+QM NG
Sbjct: 299 GLQMSNG 305


>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b

Query: 4   GVQMDNG 10
           G Q+DNG
Sbjct: 282 GAQIDNG 288


>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16

Query: 2   YTGVQMDN 9
           Y G+ +DN
Sbjct: 257 YEGIDVDN 264


>sp|UL42_HCMVM|PROTEIN UL42|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  TGVQMDNG 10
          TG   DNG
Sbjct: 76 TGAYFDNG 83


>sp|UL42_HCMVA|PROTEIN UL42|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  TGVQMDNG 10
          TG   DNG
Sbjct: 76 TGAYFDNG 83


>sp|UL42_HCMVT|PROTEIN UL42|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3  TGVQMDNG 10
          TG   DNG
Sbjct: 76 TGAYFDNG 83


>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)

Query: 1   IYTGVQMDNG 10
           IYT   + NG
Sbjct: 178 IYTSPSLQNG 187


>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   IYTGVQMDNG 10
           IYT   + NG
Sbjct: 178 IYTSPSLQNG 187


>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)

Query: 1   IYTGVQMDNG 10
           +YT V + NG
Sbjct: 167 VYTTVVIHNG 176


>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9

Query: 2   YTGVQMDNG 10
           Y GV++ NG
Sbjct: 414 YQGVKVKNG 422


>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8

Query: 2   YTGVQMDNG 10
           Y GV+ DN 
Sbjct: 343 YQGVEPDNA 351




42|SequenceR|215|206|MFMKEIYTGV

>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 1    MFMKEIYTGV 10
            +++KE+Y+G+
Sbjct: 1638 LYIKEVYSGI 1647


>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7

Query: 2   FMKEIYTGV 10
           FMK +Y G+
Sbjct: 360 FMKAVYPGI 368


>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4

Query: 2   FMKEIYTGV 10
           FMK +Y G+
Sbjct: 354 FMKAMYPGM 362


>sp|VU84_HHV6Z|PROTEIN U84|Human herpesvirus 6B (strain Z29)

Query: 2   FMKEIY 7
           FM EIY
Sbjct: 176 FMSEIY 181


>sp|VU84_HHV6U|PROTEIN U84|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   FMKEIY 7
           FM EIY
Sbjct: 176 FMSEIY 181


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 1   MFMKEIYTG 9
           + MK IY G
Sbjct: 666 LLMKAIYDG 674


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   MFMKEIYTG 9
           + MK IY G
Sbjct: 666 LLMKAIYDG 674


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 2    FMKEIYTG 9
            FM+E+ TG
Sbjct: 1308 FMEELSTG 1315


>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)

Query: 2   FMKEIY 7
           FMK++Y
Sbjct: 217 FMKDLY 222


>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2   FMKEIY 7
           FMK++Y
Sbjct: 349 FMKDLY 354


>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2   FMKEIY 7
           FMK++Y
Sbjct: 349 FMKDLY 354


>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2   FMKEIY 7
           FMK++Y
Sbjct: 349 FMKDLY 354


>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2   FMKEIY 7
           FMK++Y
Sbjct: 349 FMKDLY 354


>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2   FMKEIY 7
           FMK++Y
Sbjct: 349 FMKDLY 354


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 3   MKEIYTGV 10
           MKE+ TG+
Sbjct: 784 MKEMGTGI 791


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 5   EIYTGV 10
           ++YTGV
Sbjct: 894 QVYTGV 899


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 5   EIYTGV 10
           ++YTGV
Sbjct: 894 QVYTGV 899




43|SequenceR|220|211|GSLESMFMKE

>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1   GSLESMF 7
           G+LE+MF
Sbjct: 205 GALEAMF 211


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank

Query: 1   GSLESMF 7
           G+LE+MF
Sbjct: 205 GALEAMF 211


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 1   GSLESMFMK 9
           G +ES F+K
Sbjct: 252 GEIESQFLK 260




44|SequenceR|225|216|IDIINGSLES

>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    INGSLES 10
            ING LES
Sbjct: 1008 INGGLES 1014


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1   IDIINGSLES 10
           +D+ NG LE+
Sbjct: 769 LDVYNGFLET 778


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 4   INGSLES 10
           ING LES
Sbjct: 857 INGPLES 863


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 4   INGSLES 10
           ING LES
Sbjct: 857 INGPLES 863


>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   IINGSLES 10
           I+NGSL++
Sbjct: 252 ILNGSLDT 259


>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus

Query: 3   IINGSL 8
           IINGSL
Sbjct: 338 IINGSL 343


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1   IDIINGSLES 10
           +D+ NG LE+
Sbjct: 769 LDVYNGFLET 778


>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   DIINGSLES 10
           DII  SLES
Sbjct: 268 DIIKSSLES 276


>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31

Query: 1   IDIINGSL 8
           I +INGSL
Sbjct: 202 ITLINGSL 209


>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   IDIINGSL 8
           I ++NGSL
Sbjct: 751 IRLVNGSL 758


>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4

Query: 3   IINGSLE 9
           +INGSL+
Sbjct: 485 LINGSLK 491


>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   IDIINGSL 8
           I ++NGSL
Sbjct: 746 IRLVNGSL 753


>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   IDIINGSL 8
           I ++NGSL
Sbjct: 746 IRLVNGSL 753


>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   IINGSLES 10
           I+NGSL +
Sbjct: 253 ILNGSLNT 260


>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   IDIINGSL 8
           I ++NGSL
Sbjct: 741 IRLVNGSL 748


>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   IDIINGSL 8
           I ++NGSL
Sbjct: 746 IRLVNGSL 753


>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong

Query: 1   IDIINGSL 8
           ID+ING +
Sbjct: 374 IDLINGKV 381


>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   IDIINGSL 8
           I ++NGSL
Sbjct: 746 IRLVNGSL 753




45|SequenceR|230|221|AGVPCIDIIN

>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 2    GVPCIDIIN 10
            GVP +DII+
Sbjct: 3094 GVPLMDIIS 3102


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1    AGVPCIDIIN 10
            +G PC  ++N
Sbjct: 2081 SGAPCTTVLN 2090


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 1    AGVPCIDIIN 10
            +G PC  ++N
Sbjct: 2016 SGSPCTTVLN 2025


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 1    AGVPCIDIIN 10
            +G PC  ++N
Sbjct: 2007 SGSPCTTVLN 2016


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 1    AGVPCIDIIN 10
            +G PC  ++N
Sbjct: 2008 SGSPCTTVLN 2017


>sp|VP30_MABVO|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2  GVPCIDI 8
          G+PC D+
Sbjct: 84 GLPCTDL 90


>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2  GVPCID 7
          G+PC D
Sbjct: 84 GLPCTD 89


>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)

Query: 2  GVPCID 7
          G+PC D
Sbjct: 84 GLPCTD 89


>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2  GVPCID 7
          G+PC D
Sbjct: 84 GLPCTD 89


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    AGVPCIDI 8
             G PCI +
Sbjct: 3834 GGTPCIKV 3841


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1    AGVPCIDI 8
             G PCI +
Sbjct: 3834 GGTPCIKV 3841


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 4   PCIDI 8
           PC+DI
Sbjct: 362 PCMDI 366


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 4   PCIDI 8
           PC+DI
Sbjct: 362 PCMDI 366


>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4   PCIDI 8
           PC+D+
Sbjct: 369 PCVDV 373


>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   PCIDI 8
           PC+D+
Sbjct: 369 PCVDV 373


>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4   PCIDI 8
           PC+D+
Sbjct: 369 PCVDV 373


>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2  GVPCID 7
          G+PC D
Sbjct: 84 GLPCAD 89


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 1    AGVPC 5
            +GVPC
Sbjct: 1489 SGVPC 1493


>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P

Query: 2   GVPCID 7
           GVPC D
Sbjct: 497 GVPCRD 502


>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)

Query: 1   AGVPCI 6
           A VPC+
Sbjct: 140 ASVPCV 145


>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain

Query: 1   AGVPCI 6
           A VPC+
Sbjct: 165 ASVPCV 170


>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)

Query: 1   AGVPCI 6
           A VPC+
Sbjct: 160 ASVPCV 165


>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73

Query: 1   AGVPCIDIIN 10
           AGV C+  +N
Sbjct: 152 AGVGCLQNVN 161


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1    AGVPCIDI 8
            A VP ID+
Sbjct: 1543 ANVPAIDV 1550


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1    AGVPCIDI 8
            A VP ID+
Sbjct: 1543 ANVPAIDV 1550


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2    GVPCIDII 9
             + C+DI+
Sbjct: 1017 AIKCVDIV 1024


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    GVPCIDII 9
             + C+DI+
Sbjct: 1017 AIKCVDIV 1024


>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind

Query: 1   AGVPCID 7
           AG+ C D
Sbjct: 302 AGIKCFD 308




46|SequenceR|235|226|PKSTLAGVPC

>sp|MATRX_ABLVB|MATRIX protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 4   TLAGVPC 10
           TL+G PC
Sbjct: 110 TLSGAPC 116


>sp|NS1_I56A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/Prague/1/1956

Query: 1  PKSTLAGVP 9
          PK T+  VP
Sbjct: 77 PKGTITSVP 85


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 1    PKSTLAGVP 9
            P S+LAG P
Sbjct: 1506 PNSSLAGRP 1514


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    PKSTLAG 7
            PKS+LAG
Sbjct: 1514 PKSSLAG 1520


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    PKSTLAG 7
            PKS+LAG
Sbjct: 1514 PKSSLAG 1520


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    PKSTLAG 7
            PKS+LAG
Sbjct: 1514 PKSSLAG 1520


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    PKSTLAG 7
            PKS+LAG
Sbjct: 1514 PKSSLAG 1520


>sp|PG043_MONPV|MONOGLYCERIDE lipase homolog|Monkeypox virus (MPXV)

Query: 2  KSTLAGVP 9
          KST  GVP
Sbjct: 92 KSTYPGVP 99


>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   STLAGVPC 10
           STL  +PC
Sbjct: 401 STLITLPC 408


>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3   STLAGV 8
           STLAGV
Sbjct: 329 STLAGV 334


>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3   STLAGV 8
           STLAGV
Sbjct: 329 STLAGV 334


>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)

Query: 3   STLAGV 8
           STLAGV
Sbjct: 329 STLAGV 334


>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)

Query: 3   STLAGV 8
           STLAGV
Sbjct: 329 STLAGV 334


>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)

Query: 3   STLAGV 8
           STLAGV
Sbjct: 329 STLAGV 334


>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)

Query: 3   STLAGV 8
           STLAGV
Sbjct: 329 STLAGV 334


>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)

Query: 3   STLAGV 8
           STLAGV
Sbjct: 329 STLAGV 334


>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)

Query: 3   STLAGV 8
           STLAGV
Sbjct: 311 STLAGV 316


>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)

Query: 3   STLAGV 8
           STLAGV
Sbjct: 311 STLAGV 316


>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)

Query: 3   STLAGV 8
           STLAGV
Sbjct: 311 STLAGV 316


>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)

Query: 3   STLAGV 8
           STLAGV
Sbjct: 311 STLAGV 316


>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)

Query: 3   STLAGV 8
           STLAGV
Sbjct: 311 STLAGV 316




47|SequenceR|240|231|ATFAYPKSTL

>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   FAYPKST 9
           F+YPKS+
Sbjct: 652 FSYPKSS 658


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 3   FAYPKST 9
           F+YPKS+
Sbjct: 652 FSYPKSS 658


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 1   ATFAYPKSTL 10
            +F Y +STL
Sbjct: 679 VSFVYDRSTL 688




48|SequenceR|245|236|TEWPRATFAY

>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 2    EWPRAT 7
            EWP+AT
Sbjct: 1159 EWPKAT 1164


>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)

Query: 1  TEWPRATFAY 10
          TEW +  F Y
Sbjct: 56 TEWTKIKFTY 65


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1    TEWPRA 6
            +EWP+A
Sbjct: 1016 SEWPKA 1021


>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P

Query: 1   TEWPR 5
           T WPR
Sbjct: 175 TSWPR 179


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2   EWPRATF 8
           EW  ATF
Sbjct: 900 EWSVATF 906


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2   EWPRATF 8
           EW  ATF
Sbjct: 900 EWSVATF 906


>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2   EWPRATFAY 10
           +W R T AY
Sbjct: 792 DWLRLTIAY 800


>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New

Query: 4   PRATFAY 10
           PR TF Y
Sbjct: 558 PRPTFLY 564


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2   EWPRATF 8
           +WPRA  
Sbjct: 958 DWPRAGL 964


>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)

Query: 1   TEWPRATFAY 10
           T W   +FAY
Sbjct: 201 TYWTEDSFAY 210




49|SequenceR|250|241|SETKRTEWPR

>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 4   KRTEWP 9
           +RTEWP
Sbjct: 283 ERTEWP 288


>sp|VU51_HHV6Z|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6B (strain Z29)

Query: 2  ETKRTEWP 9
          ETK   WP
Sbjct: 4  ETKSLAWP 11


>sp|VU51_HHV6U|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6A (strain

Query: 2  ETKRTEWP 9
          ETK   WP
Sbjct: 4  ETKSLAWP 11


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2    ETKRTEWPR 10
            ETK   WPR
Sbjct: 1012 ETKACIWPR 1020


>sp|C_VSIVM|PROTEIN C'|Vesicular stomatitis Indiana virus (strain

Query: 1  SETKRTEW 8
          S +KRTEW
Sbjct: 14 SCSKRTEW 21


>sp|C_VSIVN|PROTEIN C'|Vesicular stomatitis Indiana virus (strain

Query: 1  SETKRTEW 8
          S +KRTEW
Sbjct: 14 SCSKRTEW 21


>sp|C_VSIVG|PROTEIN C'|Vesicular stomatitis Indiana virus (strain

Query: 1  SETKRTEW 8
          S +KRTEW
Sbjct: 14 SCSKRTEW 21




50|SequenceR|255|246|DMVDISETKR

>sp|US03_HCMVM|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   DMVDISETKR 10
           DMVDI+ + R
Sbjct: 110 DMVDITLSTR 119


>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   DMVDISETKR 10
           DMVDI+ + R
Sbjct: 110 DMVDITLSTR 119


>sp|US03_HCMVA|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   DMVDISETKR 10
           DMVDI+ + R
Sbjct: 110 DMVDITLSTR 119


>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61

Query: 1  DMVDISETKR 10
          D+VD  +T+R
Sbjct: 51 DLVDFIDTRR 60


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 2   MVDISET 8
           MVDISE+
Sbjct: 361 MVDISES 367




51|SequenceR|260|251|NSGVADMVDI

>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 3   GVADMVD 9
           G+ADM+D
Sbjct: 568 GIADMID 574


>sp|UL79_HHV6Z|PROTEIN U52|Human herpesvirus 6B (strain Z29)

Query: 1  NSGVADMV 8
          NSG+ D+V
Sbjct: 65 NSGIGDIV 72


>sp|UL79_HHV6U|PROTEIN U52|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  NSGVADMV 8
          NSG+ D+V
Sbjct: 65 NSGIGDIV 72


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2    SGVADMVDI 10
            +GVA+++DI
Sbjct: 2892 TGVAEVMDI 2900


>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann

Query: 1   NSGVADMVDI 10
           N G+AD+ D+
Sbjct: 305 NPGIADIEDL 314


>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)

Query: 1   NSGVADMVDI 10
           N G+AD+ D+
Sbjct: 305 NPGIADIEDL 314


>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)

Query: 1   NSGVADMVDI 10
           N G+AD+ D+
Sbjct: 305 NPGIADIEDL 314


>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)

Query: 1   NSGVADMVDI 10
           N G+AD+ D+
Sbjct: 305 NPGIADIEDL 314


>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann

Query: 1   NSGVADMVDI 10
           N G+AD+ D+
Sbjct: 305 NPGIADIEDL 314


>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann

Query: 1   NSGVADMVDI 10
           N G+AD+ D+
Sbjct: 305 NPGIADIEDL 314


>sp|US03_HCMVM|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   SGVADMVDI 10
           S   DMVDI
Sbjct: 106 SHTVDMVDI 114


>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate

Query: 2  SGVADMVD 9
          SG+AD+ D
Sbjct: 14 SGIADIRD 21


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 4   VADMVD 9
           +ADM+D
Sbjct: 569 IADMID 574


>sp|UL79_HHV7J|PROTEIN U52|Human herpesvirus 7 (strain JI)

Query: 1  NSGVADMV 8
          N GV+D+V
Sbjct: 65 NIGVSDLV 72


>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus

Query: 2   SGVADMVD 9
           +GV D+VD
Sbjct: 417 NGVLDLVD 424


>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   SGVADMVD 9
           +GV D+VD
Sbjct: 417 NGVLDLVD 424


>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   SGVADMVD 9
           +GV D+VD
Sbjct: 417 NGVLDLVD 424


>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)

Query: 2   SGVADMVD 9
           +GV D+VD
Sbjct: 417 NGVLDLVD 424


>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P

Query: 2   SGVADMVD 9
           SGV D+V+
Sbjct: 321 SGVTDVVE 328


>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   SGVADMVD 9
           SGV D+V+
Sbjct: 328 SGVTDVVE 335


>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   SGVADMVD 9
           SGV D+V+
Sbjct: 328 SGVTDVVE 335


>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   SGVADMVD 9
           SGV D+V+
Sbjct: 328 SGVTDVVE 335


>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12

Query: 1   NSGVADMVD 9
           N+G+  +VD
Sbjct: 498 NNGIESLVD 506


>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5

Query: 1   NSGVADMVD 9
           N+G+  +VD
Sbjct: 510 NNGIESLVD 518


>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2

Query: 1   NSGVADMVD 9
           N+G+  +VD
Sbjct: 510 NNGIESLVD 518




52|SequenceR|265|256|TSVVINSGVA

>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13

Query: 2   SVVINSGVA 10
           S +INSGV 
Sbjct: 111 SAIINSGVP 119


>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1    TSVVINSGV 9
            TSV+IN+ +
Sbjct: 1055 TSVIINNPI 1063


>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1    TSVVINSGV 9
            TSV+IN+ +
Sbjct: 1055 TSVIINNPI 1063




53|SequenceR|270|261|VEGTRTSVVI

>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 2   EGTRTSVVI 10
           EGTRT++ +
Sbjct: 231 EGTRTALSV 239


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 2   EGTRTSVVI 10
           EGTRT++ +
Sbjct: 236 EGTRTALSV 244


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 2   EGTRTSVVI 10
           EGTRT++ +
Sbjct: 236 EGTRTALSV 244


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 2   EGTRTSVVI 10
           EGTRT++ +
Sbjct: 236 EGTRTALSV 244


>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2   EGTRTSVVI 10
           EGTRT++ +
Sbjct: 233 EGTRTALSV 241


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 2   EGTRTSVVI 10
           EGTRT++ +
Sbjct: 233 EGTRTALSV 241


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2   EGTRTSVVI 10
           EGTRT++ +
Sbjct: 233 EGTRTALSV 241


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1    VEGTRTSV 8
            VEGT+T V
Sbjct: 1999 VEGTKTPV 2006


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1    VEGTRTSV 8
            VEGT+T V
Sbjct: 1999 VEGTKTPV 2006


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1    VEGTRTSV 8
            VEGT+T V
Sbjct: 1999 VEGTKTPV 2006


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1    VEGTRTSV 8
            VEGT+T V
Sbjct: 1999 VEGTKTPV 2006


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1   VEGTRTSVVI 10
           V G+R SV++
Sbjct: 874 VRGSRDSVIL 883


>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)

Query: 2   EGTRTSVVI 10
           EGTRT++ +
Sbjct: 231 EGTRTALSV 239


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1    VEGTRT 6
            +EGTRT
Sbjct: 1053 LEGTRT 1058


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1    VEGTRT 6
            +EGTRT
Sbjct: 1053 LEGTRT 1058


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1    VEGTRT 6
            +EGTRT
Sbjct: 1053 LEGTRT 1058


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1    VEGTRT 6
            +EGTRT
Sbjct: 1053 LEGTRT 1058


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1    VEGTRT 6
            +EGTRT
Sbjct: 1053 LEGTRT 1058


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1    VEGTRT 6
            +EGTRT
Sbjct: 1050 LEGTRT 1055


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1    VEGTRT 6
            +EGTRT
Sbjct: 1050 LEGTRT 1055


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1    VEGTRT 6
            +EGTRT
Sbjct: 1051 LEGTRT 1056


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1    VEGTRT 6
            +EGTRT
Sbjct: 1051 LEGTRT 1056


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1    VEGTRT 6
            +EGTRT
Sbjct: 1050 LEGTRT 1055


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1    VEGTRT 6
            +EGTRT
Sbjct: 1050 LEGTRT 1055


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1    VEGTRTSV 8
            +EGT+T V
Sbjct: 1999 IEGTKTPV 2006


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1    VEGTRTSV 8
            +EGT+T V
Sbjct: 1999 IEGTKTPV 2006


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1    VEGTRTSV 8
            +EGT+T V
Sbjct: 1999 IEGTKTPV 2006


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1    VEGTRTSV 8
            +EGT+T V
Sbjct: 1999 IEGTKTPV 2006


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    EGTRTSVVI 10
            EG  T+VVI
Sbjct: 1293 EGVLTAVVI 1301




54|SequenceR|275|266|PLIRMVEGTR

>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   PLIRMVEG 8
           P++ M+EG
Sbjct: 579 PVVNMIEG 586


>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   PLIRMVEG 8
           P++ M+EG
Sbjct: 579 PVVNMIEG 586


>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)

Query: 1   PLIRMVEG 8
           P++ M+EG
Sbjct: 579 PVVNMIEG 586


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 2    LIRMVEG 8
            LIRM+EG
Sbjct: 3132 LIRMMEG 3138


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 2    LIRMVEG 8
            LIRM+EG
Sbjct: 3132 LIRMMEG 3138


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 2    LIRMVEG 8
            LIRM+EG
Sbjct: 3130 LIRMMEG 3136


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 2    LIRMVEG 8
            LIRM+EG
Sbjct: 3132 LIRMMEG 3138


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 2    LIRMVEG 8
            LIRM+EG
Sbjct: 3132 LIRMMEG 3138


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2    LIRMVEG 8
            LIRM+EG
Sbjct: 3134 LIRMMEG 3140


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 2    LIRMVEG 8
            LIRM+EG
Sbjct: 3133 LIRMMEG 3139


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2    LIRMVEG 8
            LIRM+EG
Sbjct: 3134 LIRMMEG 3140


>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977

Query: 2   LIRMVEGTR 10
           +IRM+EG +
Sbjct: 444 IIRMMEGAK 452


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2    LIRMVEG 8
            L+RM+EG
Sbjct: 3150 LVRMMEG 3156


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2    LIRMVEG 8
            L+RM+EG
Sbjct: 3147 LVRMMEG 3153


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2    LIRMVEG 8
            L+RM+EG
Sbjct: 3150 LVRMMEG 3156


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 2    LIRMVEG 8
            L+RM+EG
Sbjct: 3132 LVRMMEG 3138


>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996

Query: 2   LIRMVEGTR 10
           +IRM+E +R
Sbjct: 444 IIRMMESSR 452


>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort

Query: 2   LIRMVEGTR 10
           +IRM+E  R
Sbjct: 444 IIRMMESAR 452




55|SequenceR|280|271|DEHMRPLIRM

>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 2    EHMRPLIR 9
            +H+RP IR
Sbjct: 1197 QHVRPTIR 1204


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 2    EHMRPLIR 9
            +H+RP IR
Sbjct: 1197 QHVRPTIR 1204


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 2    EHMRPLIR 9
            +H+RP IR
Sbjct: 1198 QHVRPTIR 1205


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 1    DEHMRP 6
            DEHM P
Sbjct: 2360 DEHMNP 2365


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 1    DEHMRP 6
            DEHM P
Sbjct: 2360 DEHMNP 2365


>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)

Query: 1   DEHMRPL 7
           DE M+PL
Sbjct: 488 DEEMQPL 494


>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   EHMRPLI 8
           +H+RPL+
Sbjct: 696 QHVRPLV 702


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 3    HMRPLIR 9
            H RPL+R
Sbjct: 1203 HNRPLLR 1209


>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   EHMRPLIR 9
           E +RPL+R
Sbjct: 390 EKIRPLLR 397


>sp|PG096_VACCC|PROTEIN OPG096|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4  MRPLIRM 10
          +RPLIR+
Sbjct: 37 LRPLIRL 43


>sp|PG096_VACCA|PROTEIN OPG096|Vaccinia virus (strain Ankara) (VACV)

Query: 4  MRPLIRM 10
          +RPLIR+
Sbjct: 37 LRPLIRL 43


>sp|PG096_VARV|PROTEIN OPG096|Variola virus

Query: 4  MRPLIRM 10
          +RPLIR+
Sbjct: 37 LRPLIRL 43


>sp|PG096_VAR67|PROTEIN OPG096|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4  MRPLIRM 10
          +RPLIR+
Sbjct: 37 LRPLIRL 43


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 3   HMRPLI 8
           H++PLI
Sbjct: 729 HLKPLI 734


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 3   HMRPLI 8
           H++PLI
Sbjct: 729 HLKPLI 734


>sp|PG096_MONPV|PROTEIN OPG096|Monkeypox virus (MPXV)

Query: 4  MRPLIRM 10
          +RPLIR+
Sbjct: 37 LRPLIRL 43




56|SequenceR|285|276|WEENIDEHMR

>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate

Query: 2   EENIDEHM 9
           EEN+D H+
Sbjct: 274 EENLDSHL 281


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 5   IDEHMR 10
           I+EHMR
Sbjct: 645 IEEHMR 650


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 5   IDEHMR 10
           I+EHMR
Sbjct: 645 IEEHMR 650


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 5    IDEHMR 10
            +DEHM+
Sbjct: 1818 VDEHMK 1823


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 5   IDEHMR 10
           I+EHMR
Sbjct: 645 IEEHMR 650


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5   IDEHMR 10
           I+EHMR
Sbjct: 645 IEEHMR 650


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 5   IDEHMR 10
           I+EHMR
Sbjct: 645 IEEHMR 650


>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)

Query: 1   WEENIDEHMR 10
           W E ID+  R
Sbjct: 123 WVEEIDKEAR 132


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 1    WEENIDEH 8
            W +NI EH
Sbjct: 1888 WTKNIVEH 1895


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 1    WEENIDEH 8
            W +NI EH
Sbjct: 1888 WTKNIVEH 1895


>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P

Query: 1   WEENIDEHMR 10
           +E ++D+H R
Sbjct: 180 YELSVDDHFR 189


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 1    WEENIDEH 8
            W +NI EH
Sbjct: 1888 WTKNIVEH 1895


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4    NIDEHM 9
            NID HM
Sbjct: 1568 NIDAHM 1573


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4    NIDEHM 9
            NID HM
Sbjct: 1568 NIDAHM 1573


>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P

Query: 1   WEENID 6
           W +NID
Sbjct: 100 WSDNID 105


>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus

Query: 2   EENIDEHM 9
           EE+IDE++
Sbjct: 144 EEDIDENI 151


>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)

Query: 2   EENIDEHM 9
           EE+IDE++
Sbjct: 144 EEDIDENI 151


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 4   NIDEHM 9
           NID+HM
Sbjct: 774 NIDKHM 779


>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)

Query: 2   EENIDEHM 9
           EE+IDE++
Sbjct: 144 EEDIDENI 151


>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   EENIDEHM 9
           EE+IDE++
Sbjct: 144 EEDIDENI 151


>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40

Query: 1   WEENID 6
           W EN+D
Sbjct: 432 WGENVD 437


>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4   NIDEHMR 10
           N++E+MR
Sbjct: 438 NVEENMR 444


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 5   IDEHMR 10
           IDE+MR
Sbjct: 514 IDEYMR 519


>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4   NIDEHMR 10
           N++E+MR
Sbjct: 438 NVEENMR 444


>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   NIDEHMR 10
           N++E+MR
Sbjct: 438 NVEENMR 444


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 1    WEENIDEH 8
            WE+ +++H
Sbjct: 2569 WEDLLEDH 2576


>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain

Query: 2   EENIDEHM 9
           +EN+D H+
Sbjct: 274 KENLDSHL 281


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 1    WEENIDEH 8
            W E IDE+
Sbjct: 1361 WVERIDEN 1368


>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 1   WEENIDEH 8
           W E  D H
Sbjct: 119 WGEEADRH 126




57|SequenceR|290|281|TKDSIWEENI

>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United

Query: 1   TKDSIWEE 8
           +KDS+W+E
Sbjct: 267 SKDSLWQE 274


>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)

Query: 1   TKDSIW 6
           T+DS+W
Sbjct: 295 TRDSVW 300


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   TKDSIW 6
           T+DS+W
Sbjct: 240 TRDSVW 245


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 3    DSIWEE 8
            DS+WE+
Sbjct: 2548 DSVWED 2553


>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   TKDSIW 6
           T+DS+W
Sbjct: 240 TRDSVW 245


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 3    DSIWEE 8
            DSIWE+
Sbjct: 1762 DSIWEK 1767


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 3    DSIWEE 8
            DSIWE+
Sbjct: 1762 DSIWEK 1767


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 3    DSIWEE 8
            DSIWE+
Sbjct: 1762 DSIWEK 1767


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 3    DSIWEE 8
            DSIWE+
Sbjct: 1762 DSIWEK 1767


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 3    DSIWEE 8
            DSIWE+
Sbjct: 1762 DSIWEK 1767


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 3    DSIWEE 8
            DSIWE+
Sbjct: 1762 DSIWEK 1767


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 3    DSIWEE 8
            DSIWE+
Sbjct: 1762 DSIWEK 1767


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 3    DSIWEE 8
            DSIWE+
Sbjct: 1763 DSIWEK 1768


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 3    DSIWEE 8
            DSIWE+
Sbjct: 1762 DSIWEK 1767


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 3    DSIWEE 8
            DSIWE+
Sbjct: 1762 DSIWEK 1767


>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 2   KDSIWEENI 10
           ++S WE NI
Sbjct: 305 ENSYWESNI 313


>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)

Query: 4   SIWEENI 10
           ++WE NI
Sbjct: 454 NLWENNI 460


>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   SIWEENI 10
           ++WE NI
Sbjct: 454 NLWENNI 460


>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933

Query: 1  TKDSIWEENI 10
          T D+I+E+N+
Sbjct: 32 TVDTIFEKNV 41


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 3   DSIWEEN 9
           DSI++EN
Sbjct: 326 DSIYQEN 332


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 3   DSIWEEN 9
           DSI++EN
Sbjct: 326 DSIYQEN 332


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 3   DSIWEEN 9
           D +WEE+
Sbjct: 859 DGVWEES 865


>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   DSIWEENI 10
           + IWE N+
Sbjct: 313 NGIWESNL 320


>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5

Query: 4   SIWEEN 9
           S+W EN
Sbjct: 485 SLWSEN 490


>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2

Query: 4   SIWEEN 9
           S+W EN
Sbjct: 485 SLWSEN 490


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 2    KDSIW 6
            +DSIW
Sbjct: 1613 RDSIW 1617


>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)

Query: 3   DSIWEEN 9
           DSI+E N
Sbjct: 301 DSIYENN 307


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 4    SIWEENI 10
            S W ENI
Sbjct: 3366 STWAENI 3372


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 4   SIWEEN 9
           SIWE N
Sbjct: 168 SIWESN 173


>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)

Query: 1   TKDSIWEE 8
           T+D  W E
Sbjct: 427 TQDQAWSE 434


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2   KDSIWEENI 10
           KDS  EEN+
Sbjct: 899 KDSDEEENV 907


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   KDSIWEENI 10
           KDS  EEN+
Sbjct: 899 KDSDEEENV 907


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 4    SIWEENI 10
            S W ENI
Sbjct: 3382 STWAENI 3388


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   KDSIWEENI 10
           KDS  EEN+
Sbjct: 898 KDSDEEENV 906


>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7

Query: 1   TKDSIWEEN 9
           +KD+ WE++
Sbjct: 420 SKDNGWEKD 428


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2   KDSIW 6
           +DSIW
Sbjct: 216 RDSIW 220




58|SequenceR|295|286|DYAFRTKDSI

>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus

Query: 1   DYAFRTKD 8
           D +FRT+D
Sbjct: 103 DLSFRTRD 110


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 1    DYAFRTKDSI 10
            ++A+RT+D +
Sbjct: 2184 EFAYRTQDDV 2193


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 1    DYAFRTKDSI 10
            ++A+RT+D +
Sbjct: 2184 EFAYRTQDDV 2193


>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)

Query: 2   YAFRTKDSI 10
           YA RT+D +
Sbjct: 543 YAVRTQDGM 551


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 2   YAFRTKDSI 10
           YA RT+D +
Sbjct: 542 YAVRTQDGM 550


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 2   YAFRTKDSI 10
           YA RT+D +
Sbjct: 542 YAVRTQDGM 550


>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)

Query: 2   YAFRTKDSI 10
           YA RT+D +
Sbjct: 542 YAVRTQDGM 550


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 2   YAFRTKDSI 10
           YA RT+D +
Sbjct: 543 YAVRTQDGM 551


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 2   YAFRTKDSI 10
           YA RT+D +
Sbjct: 542 YAVRTQDGM 550


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 2   YAFRTKDSI 10
           YA RT+D +
Sbjct: 542 YAVRTQDGM 550


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 2   YAFRTKDSI 10
           YA RT+D +
Sbjct: 542 YAVRTQDGM 550


>sp|EBNA2_EBVG|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   DYAFRTKDS 9
           DY F T +S
Sbjct: 423 DYIFETTES 431


>sp|EBNA2_EBVB9|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   DYAFRTKDS 9
           DY F T +S
Sbjct: 459 DYIFETTES 467


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 2   YAFRTK 7
           +AFRTK
Sbjct: 422 WAFRTK 427


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 2   YAFRTK 7
           +AFRTK
Sbjct: 422 WAFRTK 427


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 5    RTKDSI 10
            RTKDSI
Sbjct: 1016 RTKDSI 1021




59|SequenceR|300|291|QRKLGDYAFR

>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2    RKLGDYAF 9
            R+LGD+ +
Sbjct: 2094 RRLGDFHY 2101


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2    RKLGDYAF 9
            R+LGD+ +
Sbjct: 2094 RRLGDFHY 2101


>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 3   KLGDYA 8
           KLGDY 
Sbjct: 473 KLGDYG 478


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 3   KLGDYA 8
           KLGDY 
Sbjct: 473 KLGDYG 478


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 3   KLGDYA 8
           KLGDY 
Sbjct: 473 KLGDYG 478


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 3   KLGDYA 8
           KLGDY 
Sbjct: 473 KLGDYG 478


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 3   KLGDYA 8
           KLGDY 
Sbjct: 401 KLGDYG 406


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 3   KLGDYA 8
           KLGDY 
Sbjct: 473 KLGDYG 478


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 3   KLGDYA 8
           KLGDY 
Sbjct: 473 KLGDYG 478


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 3   KLGDYA 8
           KLGDY 
Sbjct: 473 KLGDYG 478


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 3   KLGDYA 8
           KLGDY 
Sbjct: 473 KLGDYG 478


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 1   QRKLGDYAF 9
           Q +LG YA+
Sbjct: 150 QAQLGRYAY 158


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   QRKLGDYAF 9
           Q +LG YA+
Sbjct: 150 QAQLGRYAY 158


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2    RKLGDYAF 9
            RK+GD+ +
Sbjct: 2099 RKVGDFHY 2106


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank

Query: 1   QRKLGDY 7
           +RKLG Y
Sbjct: 756 ERKLGSY 762


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 2   RKLGDYAF 9
           ++LGDY  
Sbjct: 487 KRLGDYVL 494


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2   RKLGDYAF 9
           ++LGDY  
Sbjct: 487 KRLGDYVL 494


>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United

Query: 1   QRKLGDYAFR 10
           Q+KL  Y FR
Sbjct: 148 QKKLIFYGFR 157




60|SequenceR|305|296|PETLRQRKLG

>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   PETLRQRKL 9
           PE LRQR L
Sbjct: 655 PEALRQRYL 663


>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   PETLRQRKL 9
           PE LRQR L
Sbjct: 655 PEALRQRYL 663


>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   PETLRQRKL 9
           PE LRQR L
Sbjct: 655 PEALRQRYL 663


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1    PETLRQRKL 9
            PE LR+R+L
Sbjct: 1678 PEMLRKRQL 1686


>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69

Query: 1   PETLRQRKL 9
           PET ++R+L
Sbjct: 239 PETAKRRRL 247


>sp|VPU_HV1RH|PROTEIN Vpu|Human immunodeficiency virus type 1

Query: 2  ETLRQRKL 9
          +TLRQ+K+
Sbjct: 32 KTLRQKKI 39


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2   ETLRQRKL 9
           + +RQRKL
Sbjct: 755 DVMRQRKL 762


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 2   ETLRQRKL 9
           + +RQRKL
Sbjct: 755 DVMRQRKL 762


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2   ETLRQRKL 9
           + +RQRKL
Sbjct: 755 DVMRQRKL 762


>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4   LRQRKLG 10
           +R+RKLG
Sbjct: 297 VRKRKLG 303


>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   LRQRKLG 10
           +R+RKLG
Sbjct: 297 VRKRKLG 303


>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4   LRQRKLG 10
           +R+RKLG
Sbjct: 297 VRKRKLG 303


>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka

Query: 1   PETLRQRKL 9
           PE LRQ++ 
Sbjct: 350 PELLRQQRF 358


>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)

Query: 1   PETLRQRKL 9
           PE LRQ++ 
Sbjct: 350 PELLRQQRF 358




61|SequenceR|310|301|ENRVMPETLR

>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 2    NRVMPETLR 10
            +RV+PE +R
Sbjct: 1696 HRVLPELIR 1704


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 2    NRVMPETLR 10
            +RV+PE +R
Sbjct: 1696 HRVLPELIR 1704


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 2    NRVMPETLR 10
            +RV+PE +R
Sbjct: 1696 HRVLPELIR 1704


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 2    NRVMPETLR 10
            +RV+PE +R
Sbjct: 1696 HRVLPELIR 1704


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 2    NRVMPETLR 10
            +RV+PE +R
Sbjct: 1696 HRVLPELIR 1704


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 2    NRVMPETLR 10
            +RV+PE +R
Sbjct: 1696 HRVLPELIR 1704


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 2    NRVMPETLR 10
            +RV+PE +R
Sbjct: 1696 HRVLPELIR 1704


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 2    NRVMPETLR 10
            +RV+PE +R
Sbjct: 1696 HRVLPELIR 1704


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1    ENRVMPE 7
            E RV+PE
Sbjct: 2120 EERVLPE 2126


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 1    ENRVMPE 7
            E RV+PE
Sbjct: 2120 EERVLPE 2126


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2    NRVMPETLR 10
            +RV+PE +R
Sbjct: 1698 HRVLPELVR 1706


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2    NRVMPETLR 10
            +RV+PE +R
Sbjct: 1698 HRVLPELVR 1706


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 3    RVMPETLR 10
            RV+PE +R
Sbjct: 1701 RVLPEIVR 1708


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 3    RVMPETLR 10
            RV+PE +R
Sbjct: 1705 RVLPEIVR 1712


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 3    RVMPETLR 10
            RV+PE +R
Sbjct: 1705 RVLPEIVR 1712




62|SequenceR|315|306|TLLGKENRVM

>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 1    TLLGKENRVM 10
            T +GKEN+++
Sbjct: 1915 TTIGKENKIL 1924


>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain

Query: 1   TLLGKENRVM 10
           TL+G E RV+
Sbjct: 402 TLMGAEGRVL 411


>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)

Query: 1   TLLGKENRVM 10
           TL+G E RV+
Sbjct: 402 TLMGAEGRVL 411


>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain

Query: 1   TLLGKENRVM 10
           TL+G E RV+
Sbjct: 402 TLMGAEGRVL 411


>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain

Query: 1   TLLGKENRVM 10
           TL+G E RV+
Sbjct: 402 TLMGAEGRVL 411


>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)

Query: 1   TLLGKENRVM 10
           TL+G E RV+
Sbjct: 402 TLMGAEGRVL 411


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1    TLLGKEN 7
            TLLGK+N
Sbjct: 1913 TLLGKDN 1919


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1    TLLGKEN 7
            TLLGK+N
Sbjct: 1911 TLLGKDN 1917


>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain

Query: 1   TLLGKENR 8
           TL+G EN+
Sbjct: 97  TLIGTENK 104


>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate

Query: 1   TLLGKENR 8
           TL+G EN+
Sbjct: 97  TLIGTENK 104


>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956

Query: 2   LLGKENR 8
           +LGKEN+
Sbjct: 696 ILGKENK 702


>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973

Query: 2   LLGKENR 8
           +LGKEN+
Sbjct: 696 ILGKENK 702


>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   LLGKENR 8
           +LGKEN+
Sbjct: 696 ILGKENK 702


>sp|X_HBVD7|PROTEIN X|Hepatitis B virus genotype D

Query: 3   LGKENRVM 10
           LG+E R+M
Sbjct: 123 LGEETRLM 130


>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|X_HBVG3|PROTEIN X|Hepatitis B virus genotype G

Query: 3   LGKENRVM 10
           LG E+R+M
Sbjct: 123 LGNESRLM 130


>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 696 ILGKEDR 702


>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   LLGKENR 8
           +LGKE+R
Sbjct: 360 ILGKEDR 366




63|SequenceR|320|311|EWSTYTLLGK

>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 1   EWSTYTLL 8
           EW  YT+L
Sbjct: 286 EWPPYTIL 293


>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)

Query: 1   EWSTYTLLG 9
           +WS Y L+G
Sbjct: 455 DWSLYALIG 463


>sp|VE4_HPV65|PROTEIN E4|Human papillomavirus 65

Query: 1   EWSTYTLLGK 10
           +WS   LLGK
Sbjct: 91  DWSLRHLLGK 100


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2    WSTYTLL 8
            W+T+T+L
Sbjct: 6472 WNTFTML 6478


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   TYTLLG 9
           TYTLLG
Sbjct: 724 TYTLLG 729


>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)

Query: 1  EWSTYTL 7
          +WS+Y L
Sbjct: 7  QWSSYVL 13


>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  EWSTYTL 7
          +WS+Y L
Sbjct: 7  QWSSYVL 13


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 4   TYTLLG 9
           TYTLLG
Sbjct: 724 TYTLLG 729


>sp|VL3_HPV5B|PROBABLE protein L3|Human papillomavirus type 5b

Query: 2  WSTYTLL 8
          WS YTL+
Sbjct: 34 WSLYTLM 40


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 2   WSTYTLLGK 10
           W  Y LLG+
Sbjct: 976 WILYNLLGR 984


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 2   WSTYTLLGK 10
           W  Y LLG+
Sbjct: 976 WILYNLLGR 984


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 4   TYTLLG 9
           TYTLLG
Sbjct: 791 TYTLLG 796


>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)

Query: 1   EWSTYTLLG 9
           EW  Y L+G
Sbjct: 455 EWKRYFLIG 463


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2    WSTYT 6
            WST+T
Sbjct: 6425 WSTFT 6429


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4    TYTLLG 9
            TY+LLG
Sbjct: 1040 TYSLLG 1045


>sp|ORF1_HPBVH|UNCHARACTERIZED ORF1 protein|Human picobirnavirus (strain

Query: 1  EWSTY 5
          EW TY
Sbjct: 80 EWETY 84


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 1   EWSTY 5
           EW TY
Sbjct: 106 EWPTY 110


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 1   EWSTY 5
           EW TY
Sbjct: 106 EWPTY 110


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 1   EWSTY 5
           EW TY
Sbjct: 104 EWPTY 108




64|SequenceR|325|316|RSLADEWSTY

>sp|ORF1_HPBVH|UNCHARACTERIZED ORF1 protein|Human picobirnavirus (strain

Query: 2  SLADEWSTY 10
          +LA EW TY
Sbjct: 76 NLAREWETY 84


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 1    RSLADEWST 9
            R  ADEW+T
Sbjct: 1027 RMTADEWNT 1035


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 1    RSLADEWST 9
            R  ADEW+T
Sbjct: 1027 RMTADEWNT 1035


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 1    RSLADEWST 9
            R  A+EWST
Sbjct: 1030 RLTAEEWST 1038


>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)

Query: 5   DEWSTY 10
           D+W TY
Sbjct: 142 DDWCTY 147


>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)

Query: 3 LADEW 7
         +ADEW
Sbjct: 5 MADEW 9


>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)

Query: 5   DEWSTY 10
           D+W TY
Sbjct: 142 DDWCTY 147


>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant

Query: 5   DEWSTY 10
           D+W TY
Sbjct: 142 DDWCTY 147


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 4    ADEWST 9
            AD+W+T
Sbjct: 1050 ADKWAT 1055


>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain

Query: 4   ADEWS 8
           ADEW+
Sbjct: 568 ADEWA 572


>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 LADEW 7
         +ADEW
Sbjct: 5 VADEW 9


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 3    LADEWS 8
            + DEWS
Sbjct: 1180 IVDEWS 1185


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 6   EWSTY 10
           EW TY
Sbjct: 104 EWPTY 108


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 6   EWSTY 10
           EW TY
Sbjct: 106 EWPTY 110




65|SequenceR|330|321|LMGAVRSLAD

 ***** No hits found ******


66|SequenceR|335|326|GQFSQLMGAV

>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 1   GQFSQLMGAV 10
           G F  +MGA+
Sbjct: 259 GDFETMMGAM 268


>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7

Query: 3   FSQLMGAV 10
           FSQL+G +
Sbjct: 508 FSQLIGRI 515


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 1   GQFSQLMGAV 10
           G+F Q  GA+
Sbjct: 863 GKFGQQSGAI 872


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 1   GQFSQLMGAV 10
           G+F Q  GA+
Sbjct: 863 GKFGQQSGAI 872


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 1   GQFSQLMGAV 10
           G+F Q  GA+
Sbjct: 863 GKFGQQSGAI 872


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 1   GQFSQLMGAV 10
           G+F Q  GA+
Sbjct: 863 GKFGQQSGAI 872


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 1   GQFSQLMGAV 10
           G+F Q  GA+
Sbjct: 863 GKFGQQSGAI 872


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1   GQFSQLMGAV 10
           G F+ L+G V
Sbjct: 723 GAFNTLLGGV 732


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 1   GQFSQLMGAV 10
           G F Q  GAV
Sbjct: 863 GAFGQQSGAV 872


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 1   GQFSQLMGAV 10
           G F Q  GAV
Sbjct: 851 GAFGQQSGAV 860


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 1   GQFSQLMGAV 10
           G F Q  GAV
Sbjct: 852 GAFGQQSGAV 861


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 1   GQFSQLMGAV 10
           G F Q  GAV
Sbjct: 852 GAFGQQSGAV 861


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 1   GQFSQLMGAV 10
           G F Q  GAV
Sbjct: 854 GAFGQQSGAV 863


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 1   GQFSQLMGAV 10
           G F Q  GAV
Sbjct: 849 GAFGQQSGAV 858


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 1   GQFSQLMGAV 10
           G F Q  GAV
Sbjct: 868 GAFGQQSGAV 877


>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)

Query: 1   GQFSQLMGAV 10
           G F+ L+G V
Sbjct: 723 GAFNTLLGGV 732




67|SequenceR|340|331|AAVDKGQFSQ

>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)

Query: 3  VDKGQF 8
          +DKGQ+
Sbjct: 27 IDKGQY 32


>sp|IL1BP_MONPV|INTERLEUKIN-1-BINDING protein|Monkeypox virus (MPXV)

Query: 3  VDKGQF 8
          +DKGQ+
Sbjct: 27 IDKGQY 32


>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)

Query: 3  VDKGQF 8
          +DKGQ+
Sbjct: 27 IDKGQY 32


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   AAVDKGQFSQ 10
           AA+DKG  +Q
Sbjct: 118 AAMDKGNSNQ 127


>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1   AAVDKGQFSQ 10
           AA+DKG  +Q
Sbjct: 118 AAMDKGNSNQ 127




68|SequenceR|345|336|LGGAIAAVDK

>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5

Query: 2  GGAIAAVD 9
          GGA +AVD
Sbjct: 35 GGATSAVD 42


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1    LGGAIAAV 8
            LGG +AAV
Sbjct: 1669 LGGVLAAV 1676


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   LGGAIAAV 8
           +GGA+A+V
Sbjct: 733 VGGAVASV 740


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   LGGAIAAV 8
           +GGA+A+V
Sbjct: 733 VGGAVASV 740


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   LGGAIAAV 8
           +GGA+A+V
Sbjct: 732 VGGAVASV 739


>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)

Query: 2   GGAIAA 7
           GGAIAA
Sbjct: 334 GGAIAA 339


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2    GGAIAAVD 9
            GG  AAVD
Sbjct: 1329 GGGQAAVD 1336


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 2    GGAIAAVD 9
            GG  AAVD
Sbjct: 1329 GGGQAAVD 1336


>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   GGAIAAVD 9
           GG + AVD
Sbjct: 238 GGPVLAVD 245


>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   GGAIAAVD 9
           GG + AVD
Sbjct: 307 GGPVLAVD 314




69|SequenceR|350|341|AEADVLGGAI

>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41

Query: 2  EADVLGG 8
          EAD LGG
Sbjct: 60 EADYLGG 66


>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 1   AEADVLG 7
           AE D+LG
Sbjct: 509 AEVDILG 515


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   AEADVLG 7
           AE D+LG
Sbjct: 509 AEVDILG 515


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 1   AEADVLGGA 9
           A +DV GGA
Sbjct: 212 ASSDVSGGA 220


>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1

Query: 1   AEADVLGGAI 10
           AEA  +GG +
Sbjct: 107 AEATAIGGRV 116




70|SequenceR|355|346|KLAVLAEADV

>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 1    KLAVLAEADV 10
            KL  LAEAD+
Sbjct: 1502 KLTSLAEADI 1511


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1    KLAVLAEAD 9
            KL  LA+AD
Sbjct: 2958 KLTPLADAD 2966


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1    KLAVLAEAD 9
            KL  LA+AD
Sbjct: 2958 KLTPLADAD 2966




71|SequenceR|360|351|RNLLDKLAVL

>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7

Query: 2  NLLDKLAV 9
          NLLDK+++
Sbjct: 54 NLLDKISI 61




72|SequenceR|365|356|TDSDVRNLLD

>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12

Query: 1  TDSDVRNLLD 10
          TDSDV +LLD
Sbjct: 38 TDSDVSDLLD 47


>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8

Query: 1  TDSDVRNLLD 10
          TDSD+ +LLD
Sbjct: 38 TDSDISDLLD 47


>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47

Query: 1  TDSDVRNLLD 10
          TDSD+ +LLD
Sbjct: 38 TDSDISDLLD 47


>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25

Query: 1  TDSDVRNLLD 10
          TDSD+ +LLD
Sbjct: 38 TDSDISDLLD 47


>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21

Query: 1  TDSDVRNLLD 10
          TDSD+  LLD
Sbjct: 38 TDSDISELLD 47


>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20

Query: 1  TDSDVRNLLD 10
          TDSD+  LLD
Sbjct: 38 TDSDISELLD 47


>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7

Query: 2  DSDVRNLLD 10
          DSDV +LLD
Sbjct: 39 DSDVSDLLD 47


>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7

Query: 2   DSDVRNLLD 10
           D+ +RNLLD
Sbjct: 532 DTHMRNLLD 540


>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 452 DSNVKNLYD 460


>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 452 DSNVKNLYD 460


>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 452 DSNVKNLYD 460


>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 452 DSNVKNLYD 460


>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 2   DSDVRNLLD 10
           D+ +RNLLD
Sbjct: 533 DTHMRNLLD 541


>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 458 DSNVKNLYD 466


>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 447 DSNVKNLYD 455


>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 458 DSNVKNLYD 466


>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976

Query: 2   DSDVRNLLD 10
           DS+VRNL +
Sbjct: 456 DSNVRNLYE 464


>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 458 DSNVKNLYD 466


>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 458 DSNVKNLYD 466


>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980

Query: 2   DSDVRNLLD 10
           DS+VRNL +
Sbjct: 456 DSNVRNLYE 464


>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 458 DSNVKNLYD 466


>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 447 DSNVKNLYD 455


>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 454 DSNVKNLYD 462


>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981

Query: 2   DSDVRNLLD 10
           DS+VRNL +
Sbjct: 456 DSNVRNLYE 464


>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 458 DSNVKNLYD 466


>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 454 DSNVKNLYD 462


>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 450 DSNVKNLYD 458


>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 458 DSNVKNLYD 466


>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 458 DSNVKNLYD 466


>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 458 DSNVKNLYD 466


>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 456 DSNVKNLYD 464


>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 447 DSNVKNLYD 455


>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 447 DSNVKNLYD 455


>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig

Query: 2   DSDVRNLLD 10
           DS+VRNL +
Sbjct: 456 DSNVRNLYE 464


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 458 DSNVKNLYD 466


>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005

Query: 2   DSDVRNLLD 10
           DS+V+NL D
Sbjct: 457 DSNVKNLYD 465


>sp|VP22_HHV2H|TEGUMENT protein VP22|Human herpesvirus 2 (strain HG52)

Query: 1   TDSDVRNLLD 10
           TD D+  LLD
Sbjct: 228 TDEDLNELLD 237


>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15

Query: 1  TDSDVRNLLD 10
          TD+D+ +L+D
Sbjct: 41 TDTDISDLID 50


>sp|VE7_HPV38|PROTEIN E7|Human papillomavirus 38

Query: 1  TDSDVRNLLD 10
          TD+ +RNL D
Sbjct: 69 TDAGIRNLQD 78


>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65

Query: 1  TDSDVRNLLD 10
          +DS+V NL+D
Sbjct: 38 SDSNVSNLID 47


>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57

Query: 2   DSDVRNLLD 10
           D+ +RNLLD
Sbjct: 527 DTYLRNLLD 535


>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a

Query: 2   DSDVRNLLD 10
           D+ +RNLLD
Sbjct: 534 DTYMRNLLD 542


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 3    SDVRNLL 9
            +D+RNLL
Sbjct: 999  TDIRNLL 1005


>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b

Query: 2   DSDVRNLLD 10
           D+ +RNLLD
Sbjct: 534 DTYMRNLLD 542


>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)

Query: 1   TDSDVRNLLD 10
           TDS++RN ++
Sbjct: 655 TDSEIRNAIE 664


>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27

Query: 2   DSDVRNLLD 10
           D+ +RNLLD
Sbjct: 527 DTYLRNLLD 535


>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11

Query: 2   DSDVRNLLD 10
           D+ +RNLLD
Sbjct: 534 DTYMRNLLD 542


>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32

Query: 2   DSDVRNLLD 10
           D+ +RNLLD
Sbjct: 526 DTYLRNLLD 534


>sp|VE7_HPV11|PROTEIN E7|Human papillomavirus 11

Query: 1  TDSDVRNLLD 10
          TD D+R L D
Sbjct: 72 TDGDIRQLQD 81


>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44

Query: 2   DSDVRNLLD 10
           D+ +RNLLD
Sbjct: 528 DTYMRNLLD 536


>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13

Query: 2   DSDVRNLLD 10
           D+ +RNLLD
Sbjct: 531 DTYMRNLLD 539


>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 455 DSNVKNLYE 463


>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 455 DSNVKNLYE 463


>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 455 DSNVKNLYE 463


>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 455 DSNVKNLYE 463


>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 455 DSNVKNLYE 463


>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 455 DSNVKNLYE 463


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 2  DSDVRNLLD 10
          DS++ NL+D
Sbjct: 41 DSNISNLID 49


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 2   DSDVRNLLD 10
           D  +RNLLD
Sbjct: 514 DDYLRNLLD 522


>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930

Query: 2   DSDVRNLLD 10
           DS+V+NL +
Sbjct: 456 DSNVKNLYE 464


>sp|NS1_I61A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 1   TDSDVRNLLD 10
           TD DV+N ++
Sbjct: 170 TDEDVKNAVE 179


>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63

Query: 1  TDSDVRNLLD 10
          ++SD+ +LLD
Sbjct: 41 SESDISDLLD 50


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 2   DSDVRNLLD 10
           D  +RNLLD
Sbjct: 515 DEYMRNLLD 523


>sp|NSP2_ROT41|NON-STRUCTURAL protein 2|Rotavirus A (isolate

Query: 1   TDSDVRNLL 9
           T SDV N+L
Sbjct: 94  TQSDVANVL 102


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 4   DVRNLLD 10
           +VRNLL+
Sbjct: 362 EVRNLLE 368


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 4   DVRNLLD 10
           +VRNLL+
Sbjct: 362 EVRNLLE 368


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 4   DVRNLLD 10
           +VRNLL+
Sbjct: 362 EVRNLLE 368


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 4   DVRNLLD 10
           +VRNLL+
Sbjct: 362 EVRNLLE 368


>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain

Query: 4   DVRNLL 9
           DVRN+L
Sbjct: 169 DVRNML 174


>sp|NSP2_ROTHW|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United

Query: 1   TDSDVRNLL 9
           T SDV N+L
Sbjct: 94  TQSDVANVL 102


>sp|NS1_I67A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 1   TDSDVRNLLD 10
           TD DV+N ++
Sbjct: 170 TDEDVKNAVE 179


>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a

Query: 2   DSDVRNLLD 10
           D  +RNLLD
Sbjct: 527 DIYLRNLLD 535


>sp|NSP2_ROTHT|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United

Query: 1   TDSDVRNLL 9
           T SDV N+L
Sbjct: 94  TQSDVANVL 102


>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17

Query: 1  TDSDVRNLLD 10
          TD+++ +L+D
Sbjct: 43 TDTEISDLID 52


>sp|NSP2_ROTHP|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United

Query: 1   TDSDVRNLL 9
           T SDV N+L
Sbjct: 94  TQSDVANVL 102


>sp|NSP2_ROTHK|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 1   TDSDVRNLL 9
           T SDV N+L
Sbjct: 94  TQSDVANVL 102


>sp|NSP2_ROTWI|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United

Query: 1   TDSDVRNLL 9
           T SDV N+L
Sbjct: 94  TQSDVANVL 102


>sp|NSP2_ROTHL|NON-STRUCTURAL protein 2|Rotavirus A (strain

Query: 1   TDSDVRNLL 9
           T SDV N+L
Sbjct: 94  TQSDVANVL 102




73|SequenceR|370|361|EETCLTDSDV

>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /

Query: 3   TCLTDSDV 10
           TC+ DSD+
Sbjct: 189 TCMYDSDM 196


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2    ETCLTDSDV 10
            E  LT+SDV
Sbjct: 3147 EELLTESDV 3155


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 2    ETCLTDSDV 10
            ++C  DSDV
Sbjct: 2625 KSCSIDSDV 2633


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2    ETCLTDSDV 10
            ++C  DSDV
Sbjct: 2625 KSCSIDSDV 2633


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 1   EETCLTDSDV 10
           +ETC T ++V
Sbjct: 137 DETCRTRAEV 146


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 1   EETCLTDSDV 10
           +ETC T ++V
Sbjct: 137 DETCRTRAEV 146


>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2   ETCLTD 7
           ++CLTD
Sbjct: 513 DSCLTD 518


>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)

Query: 2   ETCLTD 7
           ++CLTD
Sbjct: 513 DSCLTD 518


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 4    CLTDSDV 10
            CL D DV
Sbjct: 1002 CLMDGDV 1008


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 4    CLTDSDV 10
            CL D DV
Sbjct: 1010 CLMDGDV 1016


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 4    CLTDSDV 10
            CL D DV
Sbjct: 1001 CLMDGDV 1007




74|SequenceR|375|366|ATPFVEETCL

>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 2   TPFVEETCL 10
           TPF+E+T L
Sbjct: 559 TPFIEQTAL 567


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 2   TPFVEET 8
           TPF+E+T
Sbjct: 559 TPFIEQT 565


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 4    FVEETC 9
            +VEETC
Sbjct: 1076 YVEETC 1081


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 2   TPFVEETC 9
           TPF  +TC
Sbjct: 682 TPFSNQTC 689


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1   ATPFVEET 8
           +TPF E T
Sbjct: 633 STPFAENT 640


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1   ATPFVEET 8
           +TPF E T
Sbjct: 633 STPFAENT 640


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 2   TPFVEE 7
           TPFVE+
Sbjct: 560 TPFVEQ 565


>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1   ATPFVEE 7
             PFVEE
Sbjct: 256 GNPFVEE 262


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 3   PFVEETC 9
           PF  ETC
Sbjct: 683 PFSNETC 689


>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)

Query: 4  FVEETCL 10
          FVE+ CL
Sbjct: 81 FVEKLCL 87


>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)

Query: 1   ATPFVE 6
           ATPFV+
Sbjct: 144 ATPFVD 149


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1    ATPFVEE 7
            ATP VEE
Sbjct: 2676 ATPEVEE 2682


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1   ATPFVEET 8
           +TPF E T
Sbjct: 633 STPFAEYT 640


>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)

Query: 2   TPFVEETCL 10
           TP+  E CL
Sbjct: 200 TPWSSEVCL 208


>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 2   TPFVEETCL 10
           + F+E+ CL
Sbjct: 385 SSFIEKICL 393


>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)

Query: 4   FVEETCL 10
           FVE+ CL
Sbjct: 136 FVEKLCL 142


>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)

Query: 2   TPFVEETCL 10
           TP+  E CL
Sbjct: 200 TPWSSEVCL 208


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 4  FVEETCL 10
          FVE+ CL
Sbjct: 81 FVEKLCL 87


>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 5   VEETCL 10
           VEETC+
Sbjct: 958 VEETCV 963


>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 4   FVEETCL 10
           +VE++CL
Sbjct: 301 YVEKSCL 307


>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 4   FVEETCL 10
           +VE++CL
Sbjct: 301 YVEKSCL 307


>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 4   FVEETCL 10
           +VE++CL
Sbjct: 301 YVEKSCL 307




75|SequenceR|380|371|DTGAGATPFV

>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 1    DTGAGATPFV 10
            DTG GAT  V
Sbjct: 1124 DTGQGATDVV 1133


>sp|NS1_I67A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 1  DTGAGATPFV 10
          D G G  PF+
Sbjct: 24 DNGLGDAPFL 33


>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)

Query: 2  TGAGATP 8
          +GAGA P
Sbjct: 18 SGAGAAP 24


>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)

Query: 2  TGAGATP 8
          +GAGA P
Sbjct: 18 SGAGAAP 24


>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)

Query: 1   DTGAGATPFV 10
           + G G TP +
Sbjct: 123 EKGLGTTPII 132




76|SequenceR|385|376|YNSRLDTGAG

>sp|ORF30_HHV8P|PROTEIN ORF30|Human herpesvirus 8 type P

Query: 4  RLDTGA 9
          RLDTGA
Sbjct: 71 RLDTGA 76


>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese

Query: 1   YNSRLDTGAG 10
           YN  LD G G
Sbjct: 399 YNPLLDQGIG 408


>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 1   YNSRLDT 7
           YNS LDT
Sbjct: 221 YNSWLDT 227


>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 1   YNSRLDTGAG 10
           YN  +D G G
Sbjct: 429 YNPLMDKGVG 438


>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1

Query: 1   YNSRLDTGAG 10
           YN  +D G G
Sbjct: 359 YNPAIDDGKG 368


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 4    RLDTGA 9
            +LDTGA
Sbjct: 1890 KLDTGA 1895


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 4    RLDTGA 9
            +LDTGA
Sbjct: 1890 KLDTGA 1895


>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1   YNSRLDTG 8
           YN+++D G
Sbjct: 94  YNTQVDPG 101


>sp|YVEC_VACCC|UNCHARACTERIZED 8.0 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  YNSRLDTG 8
          +NS  DTG
Sbjct: 41 FNSTSDTG 48


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   NSRLDTG 8
           NS++D+G
Sbjct: 797 NSKIDSG 803




77|SequenceR|390|381|TTNLLYNSRL

>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 1   TTNLLYNSRL 10
           TTN+LY  RL
Sbjct: 726 TTNILYVLRL 735


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 1    TTNLLYNSRL 10
            T NLLY+ R+
Sbjct: 1149 TANLLYSVRV 1158


>sp|VEGFH_ORFN7|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ7) (OV

Query: 1  TTNLLYNSRL 10
          +TNL YN R 
Sbjct: 62 STNLQYNPRC 71


>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)

Query: 3   NLLYNSRL 10
           N LY SRL
Sbjct: 481 NPLYGSRL 488


>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)

Query: 3   NLLYNSRL 10
           N LY SRL
Sbjct: 481 NPLYGSRL 488


>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)

Query: 1   TTNLLYNSR 9
           +TN LY++R
Sbjct: 378 STNNLYSTR 386


>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   TNLLYN 7
           TNLL+N
Sbjct: 96  TNLLHN 101


>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   TNLLYN 7
           TNL+YN
Sbjct: 645 TNLIYN 650




78|SequenceR|395|386|EVGAITTNLL

>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1    EVGAITTNL 9
            ++GAI+TN+
Sbjct: 1857 KLGAISTNI 1865


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1    EVGAITTNL 9
            EVGAIT + 
Sbjct: 1619 EVGAITLDF 1627


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   VGAITT 7
           VGAITT
Sbjct: 540 VGAITT 545


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   VGAITT 7
           VGAITT
Sbjct: 540 VGAITT 545


>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2  VGAITT 7
          VGAITT
Sbjct: 44 VGAITT 49


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   VGAITT 7
           VGAITT
Sbjct: 540 VGAITT 545


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   VGAITT 7
           VGAITT
Sbjct: 540 VGAITT 545


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   VGAITT 7
           VGAITT
Sbjct: 534 VGAITT 539


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   VGAITT 7
           VGAITT
Sbjct: 540 VGAITT 545


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   VGAITT 7
           VGAITT
Sbjct: 540 VGAITT 545


>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   VGAITT 7
           VGAITT
Sbjct: 519 VGAITT 524


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   VGAITT 7
           VGAITT
Sbjct: 540 VGAITT 545


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   VGAITT 7
           VGAITT
Sbjct: 540 VGAITT 545


>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   VGAITT 7
           VGAITT
Sbjct: 540 VGAITT 545


>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human

Query: 1   EVGAITTNLL 10
           EVGA   N+L
Sbjct: 151 EVGAAGVNIL 160


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1    EVGAITTNL 9
            E+GAIT + 
Sbjct: 1619 EIGAITLDF 1627


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1   EVGAITTNLL 10
           E+  +TTNL+
Sbjct: 336 ELRTVTTNLI 345


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1   EVGAITTNLL 10
           E+  +TTNL+
Sbjct: 336 ELRTVTTNLI 345


>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4

Query: 1   EVGAITTNL 9
           E GAI TN+
Sbjct: 192 EDGAIATNI 200




79|SequenceR|400|391|VVDAEEVGAI

>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)

Query: 2   VDAEEVGAI 10
           V+ E+VGA+
Sbjct: 954 VNGEDVGAV 962




80|SequenceR|405|396|TGVLLVVDAE

>sp|IORF_CVHN1|PROTEIN I|Human coronavirus HKU1 (isolate N1)

Query: 2   GVLLVVD 8
           G+LL+VD
Sbjct: 185 GLLLIVD 191




81|SequenceR|410|401|EFRPNTGVLL

>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 2   FRPNTGV 8
           F PNTGV
Sbjct: 297 FAPNTGV 303


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 2   FRPNTGV 8
           F PNTGV
Sbjct: 297 FAPNTGV 303


>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain

Query: 3   RPNTGVLL 10
           RP TG+LL
Sbjct: 95  RPQTGMLL 102


>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain

Query: 3   RPNTGVLL 10
           RP TG+LL
Sbjct: 95  RPQTGMLL 102


>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   EFRPNT 6
           EFRP+T
Sbjct: 100 EFRPHT 105


>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   EFRPNT 6
           EFRP+T
Sbjct: 100 EFRPHT 105


>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   EFRPNT 6
           EFRP+T
Sbjct: 100 EFRPHT 105


>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 1   EFRPNTGVL 9
           E RP+ GV+
Sbjct: 733 EVRPHAGVI 741


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 2   FRPNTG 7
           FRP+TG
Sbjct: 806 FRPSTG 811


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 1   EFRPNTGVL 9
           E RP+ GV+
Sbjct: 733 EVRPHAGVI 741


>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)

Query: 2  FRPNTGVL 9
           RPN G+L
Sbjct: 11 LRPNKGLL 18


>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)

Query: 2  FRPNTGVL 9
           RPN G+L
Sbjct: 11 LRPNKGLL 18


>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)

Query: 2  FRPNTGVL 9
           RPN G+L
Sbjct: 11 LRPNKGLL 18


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1    EFRPNTGVL 9
            +F PNT ++
Sbjct: 1129 DFNPNTNII 1137


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 808 FRPTTG 813


>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   FRPNTG 7
           F+PN+G
Sbjct: 352 FKPNSG 357


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 795 FRPTTG 800


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 806 FRPTTG 811


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 806 FRPTTG 811


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 806 FRPTTG 811


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 801 FRPTTG 806


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 805 FRPTTG 810


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 806 FRPTTG 811


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 795 FRPTTG 800


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 795 FRPTTG 800


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 795 FRPTTG 800


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 806 FRPTTG 811


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 806 FRPTTG 811


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 806 FRPTTG 811


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 795 FRPTTG 800


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 795 FRPTTG 800


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 806 FRPTTG 811


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 806 FRPTTG 811


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 3    RPNTGV 8
            RP+TGV
Sbjct: 1156 RPSTGV 1161


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 2   FRPNTG 7
           FRP TG
Sbjct: 805 FRPTTG 810


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 4   PNTGV 8
           PNTGV
Sbjct: 299 PNTGV 303


>sp|VME1_SARS2|MEMBRANE protein|Severe acute respiratory syndrome coronavirus

Query: 2   FRPNTGVLL 10
           F P T +LL
Sbjct: 112 FNPETNILL 120


>sp|VME1_SARS|MEMBRANE protein|Severe acute respiratory syndrome coronavirus

Query: 2   FRPNTGVLL 10
           F P T +LL
Sbjct: 111 FNPETNILL 119


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 3    RPNTGV 8
            RP+TGV
Sbjct: 2063 RPSTGV 2068


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 3    RPNTGV 8
            RP+TGV
Sbjct: 2063 RPSTGV 2068


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1    EFRPNTGVL 9
            EF P T ++
Sbjct: 1129 EFNPETNII 1137


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 1    EFRPNTGVL 9
            EF P T ++
Sbjct: 1129 EFNPETNII 1137


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1    EFRPNTGVL 9
            EF P T ++
Sbjct: 1129 EFNPETNII 1137


>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   FRPNTG 7
           F PNTG
Sbjct: 372 FPPNTG 377


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 4   PNTGV 8
           PNTGV
Sbjct: 328 PNTGV 332


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 4   PNTGV 8
           PNTGV
Sbjct: 325 PNTGV 329


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 4   PNTGVL 9
           P+TGVL
Sbjct: 156 PSTGVL 161


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 4   PNTGVL 9
           P+TGVL
Sbjct: 156 PSTGVL 161




82|SequenceR|415|406|NFLPAEFRPN

>sp|CAPSD_HBVB7|CAPSID protein|Hepatitis B virus genotype B1

Query: 1  NFLPAEFRPN 10
          +FLPA+F P+
Sbjct: 17 SFLPADFFPS 26


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 3    LPAEFRPN 10
            +P E+RP+
Sbjct: 1062 IPTEYRPS 1069


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 3    LPAEFRPN 10
            +P E+RP+
Sbjct: 1062 IPTEYRPS 1069


>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 5   AEFRPN 10
           AEFRP+
Sbjct: 99  AEFRPH 104


>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   AEFRPN 10
           AEFRP+
Sbjct: 99  AEFRPH 104


>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   AEFRPN 10
           AEFRP+
Sbjct: 99  AEFRPH 104


>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain

Query: 3   LPAEFR--PN 10
           LP EFR  PN
Sbjct: 331 LPGEFRYYPN 340


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 2  FLPAEFRPN 10
          F P EF P+
Sbjct: 6  FYPIEFNPS 14


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1    NFLPAEFR 8
            NF PA+ R
Sbjct: 1989 NFCPAKLR 1996


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 113 MPARFYPN 120


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 113 MPARFYPN 120


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 113 MPARFYPN 120


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 113 MPARFYPN 120


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)

Query: 3   LPAEFR 8
            PAEFR
Sbjct: 663 FPAEFR 668


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate

Query: 3   LPAEFR 8
            PAEFR
Sbjct: 663 FPAEFR 668


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   LPAEFR 8
            PAEFR
Sbjct: 663 FPAEFR 668


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 3   LPAEFR 8
            PAEFR
Sbjct: 655 FPAEFR 660


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 3   LPAEFR 8
            PAEFR
Sbjct: 663 FPAEFR 668


>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 3   LPAEFR 8
            PAEFR
Sbjct: 663 FPAEFR 668


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 3   LPAEFR 8
            PAEFR
Sbjct: 663 FPAEFR 668


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 3   LPAEFR 8
            PAEFR
Sbjct: 663 FPAEFR 668


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 3   LPAEFR 8
            PAEFR
Sbjct: 663 FPAEFR 668


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 4    PAEFRP 9
            PAE RP
Sbjct: 1094 PAEVRP 1099


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 4    PAEFRP 9
            PAE RP
Sbjct: 1094 PAEVRP 1099


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 4    PAEFRP 9
            PAE RP
Sbjct: 1094 PAEVRP 1099


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 4    PAEFRP 9
            PAE RP
Sbjct: 1094 PAEVRP 1099


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 4    PAEFRPN 10
            P E+RP+
Sbjct: 1654 PREYRPS 1660


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 4    PAEFRP 9
            PAE RP
Sbjct: 1094 PAEVRP 1099


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 4    PAEFRP 9
            PAE RP
Sbjct: 1094 PAEVRP 1099


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 4    PAEFRP 9
            PAE RP
Sbjct: 1094 PAEVRP 1099


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 4    PAEFRP 9
            PAE RP
Sbjct: 1094 PAEVRP 1099


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 4    PAEFRP 9
            PAE RP
Sbjct: 1094 PAEVRP 1099


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 3   LPAEFRPN 10
           +PA F PN
Sbjct: 111 MPARFYPN 118


>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)

Query: 1   NFLPAEFR 8
           NF+PA+ R
Sbjct: 428 NFIPADER 435




83|SequenceR|420|411|KRIRANFLPA

>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 2   RIRANFLPA 10
           R+RA +LPA
Sbjct: 135 RVRALYLPA 143


>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 2   RIRANFLPA 10
           R+RA +LPA
Sbjct: 135 RVRALYLPA 143


>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 2   RIRANFLPA 10
           R+RA +LPA
Sbjct: 135 RVRALYLPA 143


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 4    RANFLPA 10
            RANF PA
Sbjct: 1987 RANFCPA 1993


>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2

Query: 2   RIRANFLPA 10
           R+RA + PA
Sbjct: 135 RVRALYFPA 143


>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2

Query: 2   RIRANFLPA 10
           R+RA + PA
Sbjct: 135 RVRALYFPA 143


>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2

Query: 2   RIRANFLPA 10
           R+RA + PA
Sbjct: 135 RVRALYFPA 143


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 2    RIRANF 7
            R+RANF
Sbjct: 1769 RLRANF 1774


>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 2   RIRANFLPA 10
           R+RA + PA
Sbjct: 135 RVRALYFPA 143


>sp|HBSAG_HBVF3|LARGE envelope protein|Hepatitis B virus genotype F1

Query: 2   RIRANFLPA 10
           R+RA + PA
Sbjct: 135 RVRALYFPA 143


>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 2   RIRANFLPA 10
           R+RA + PA
Sbjct: 124 RVRALYFPA 132


>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 2   RIRANFLPA 10
           R+RA + PA
Sbjct: 135 RVRALYFPA 143


>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)

Query: 5   ANFLPA 10
           ANF+PA
Sbjct: 427 ANFIPA 432


>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 2   RIRANFLPA 10
           R+RA + PA
Sbjct: 124 RVRALYFPA 132


>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D

Query: 2   RIRANFLPA 10
           R+R  +LPA
Sbjct: 124 RVRGLYLPA 132


>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2   RIRANFLPA 10
           R+R  +LPA
Sbjct: 124 RVRGLYLPA 132


>sp|HBSAG_HBVA3|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2   RIRANFLPA 10
           R+R  +LPA
Sbjct: 135 RVRGLYLPA 143


>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D

Query: 2   RIRANFLPA 10
           R+R  +LPA
Sbjct: 124 RVRGLYLPA 132


>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2   RIRANFLPA 10
           R+R  +LPA
Sbjct: 135 RVRGLYLPA 143


>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H

Query: 2   RIRANFLPA 10
           R+R  +LPA
Sbjct: 135 RVRGLYLPA 143


>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 2   RIRANFLPA 10
           R+R  F PA
Sbjct: 135 RVRGLFFPA 143


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1    KRIRANFL 8
            KR+  NFL
Sbjct: 2053 KRLEKNFL 2060


>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus

Query: 1  KRIRANFLP 9
          KR+  +F+P
Sbjct: 22 KRVTVDFVP 30


>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3   IRANFLPA 10
           +RA+++PA
Sbjct: 400 LRADYVPA 407


>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   IRANFLPA 10
           +RA+++PA
Sbjct: 400 LRADYVPA 407


>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3   IRANFLPA 10
           +RA+++PA
Sbjct: 400 LRADYVPA 407




84|SequenceR|425|416|NHLWSKRIRA

>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1    NHLWSKRIRA 10
            NH W K + A
Sbjct: 2131 NHFWEKTVAA 2140


>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)

Query: 4   WSKRIR 9
           WS+RIR
Sbjct: 232 WSERIR 237


>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus

Query: 2   HLWSKRIR 9
           H WS R+R
Sbjct: 96  HDWSTRLR 103


>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)

Query: 2   HLWSKRIR 9
           H WS R+R
Sbjct: 96  HDWSTRLR 103


>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   HLWSKRIR 9
           H WS R+R
Sbjct: 96  HDWSTRLR 103


>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)

Query: 2   HLWSKRIR 9
           H WS R+R
Sbjct: 96  HDWSTRLR 103


>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus

Query: 2   HLWSKRIRA 10
           HLW + ++A
Sbjct: 374 HLWPQELQA 382


>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   HLWSKRIRA 10
           HLW + ++A
Sbjct: 374 HLWPQELQA 382


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1    NHLWS 5
            NH+WS
Sbjct: 1076 NHIWS 1080


>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain

Query: 4   WSKRIR 9
           WS R+R
Sbjct: 141 WSSRLR 146


>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains

Query: 4   WSKRIR 9
           WS R+R
Sbjct: 137 WSSRLR 142


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 1    NHLWSKRIR 9
            N  WS RI+
Sbjct: 1765 NMRWSPRIK 1773


>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   NHLWSKRIR 9
           N  W  R+R
Sbjct: 457 NQTWENRVR 465


>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   NHLWSKRIR 9
           N  W  R+R
Sbjct: 457 NQTWENRVR 465


>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)

Query: 1   NHLWS 5
           +HLWS
Sbjct: 244 HHLWS 248


>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 2   HLWS 5
           HLWS
Sbjct: 247 HLWS 250


>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   LWSKRI 8
           LWS+R+
Sbjct: 400 LWSRRL 405


>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)

Query: 1   NHLWS 5
           +HLWS
Sbjct: 244 HHLWS 248


>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   LWSKRI 8
           LWS+R+
Sbjct: 406 LWSRRL 411


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 4    WSKRIRA 10
            W+ R+RA
Sbjct: 1478 WAARLRA 1484


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 4    WSKRIRA 10
            W+ R+RA
Sbjct: 1478 WAARLRA 1484


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 4    WSKRIRA 10
            W+ R+RA
Sbjct: 1478 WAARLRA 1484


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 4    WSKRIRA 10
            W+ R+RA
Sbjct: 1478 WAARLRA 1484


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 4    WSKRIRA 10
            W+ R+RA
Sbjct: 1478 WAARLRA 1484


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 4    WSKRIRA 10
            W+ R+RA
Sbjct: 1478 WAARLRA 1484


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 4    WSKRIRA 10
            W+ R+RA
Sbjct: 1478 WAARLRA 1484


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 4    WSKRIRA 10
            W+ R+RA
Sbjct: 1478 WAARLRA 1484


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 4    WSKRIRA 10
            W+ R+RA
Sbjct: 1478 WAARLRA 1484


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 1    NHLWSKRIRA 10
            +H+W++  R 
Sbjct: 1142 SHMWARLARG 1151


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1    NHLWSKRIRA 10
            +H+W++  R 
Sbjct: 1142 SHMWARLARG 1151


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1    NHLWSKRIRA 10
            +H+W++  R 
Sbjct: 1142 SHMWARLARG 1151


>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P

Query: 4  WSKRI 8
          WSKR+
Sbjct: 86 WSKRL 90




85|SequenceR|430|421|AVKLDNHLWS

>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 5    DNHLWS 10
            DNH+WS
Sbjct: 1075 DNHIWS 1080


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    AVKLDNHLWS 10
            A+K+  H WS
Sbjct: 6943 AIKITEHSWS 6952


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    AVKLDNHLWS 10
            AVK+  H W+
Sbjct: 6943 AVKITEHSWN 6952


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 5   DNHLWS 10
           D HLW+
Sbjct: 723 DGHLWN 728


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 5   DNHLWS 10
           D HLW+
Sbjct: 723 DGHLWN 728


>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   VKLDNHLW 9
           ++LDN +W
Sbjct: 309 LRLDNGIW 316


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    AVKLDNHLWS 10
            A+K+  H W+
Sbjct: 6966 AIKITEHSWN 6975


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 2   VKLDNHLWS 10
           V+L+ H W+
Sbjct: 119 VRLETHEWT 127


>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1   AVKLDNHL 8
           AVK D+HL
Sbjct: 378 AVKHDDHL 385


>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)

Query: 2   VKLDNHL 8
           ++LDNH+
Sbjct: 429 IRLDNHI 435


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 4    LDNHLW 9
            L NH+W
Sbjct: 1221 LPNHIW 1226


>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   VKLDNHL 8
           ++LDNH+
Sbjct: 418 IRLDNHI 424


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 4    LDNHLW 9
            L NH+W
Sbjct: 1222 LPNHIW 1227


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 5    DNHLWS 10
            DN +WS
Sbjct: 1075 DNQIWS 1080


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3    KLDNHLW 9
            +LDN+ W
Sbjct: 1049 QLDNNCW 1055


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 4    LDNHLW 9
            L NH+W
Sbjct: 1222 LPNHIW 1227


>sp|PG166_VARV|PROTEIN OPG166|Variola virus

Query: 3  KLDNH 7
          KLDNH
Sbjct: 48 KLDNH 52


>sp|PG166_VAR67|PROTEIN OPG166|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3  KLDNH 7
          KLDNH
Sbjct: 48 KLDNH 52


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3    KLDNHLW 9
            +LDN+ W
Sbjct: 1049 QLDNNCW 1055


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 4    LDNHLW 9
            L NH+W
Sbjct: 1222 LPNHIW 1227


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 2   VKLDNHLWS 10
           V+L  H W+
Sbjct: 119 VRLTTHAWA 127


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 3    KLDNHLW 9
            ++ NH W
Sbjct: 2128 RMPNHFW 2134


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1    AVKLDNHLWS 10
             +KL++  WS
Sbjct: 1026 GIKLNDRQWS 1035


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1    AVKLDNHLWS 10
             +KL++  WS
Sbjct: 1026 GIKLNDRQWS 1035


>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 3   KLDNHLW 9
           K+DNH +
Sbjct: 236 KVDNHTY 242


>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 3   KLDNHLW 9
           K+DNH +
Sbjct: 236 KVDNHTY 242


>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 3   KLDNHLW 9
           K+DNH +
Sbjct: 236 KVDNHTY 242


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1   AVKLDNHLW 9
           A +L+N +W
Sbjct: 835 ATRLENIMW 843


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1   AVKLDNHLW 9
           A +L+N +W
Sbjct: 834 ATRLENIMW 842


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1   AVKLDNHLW 9
           A +L+N +W
Sbjct: 835 ATRLENIMW 843


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 2  VKLDNHLW 9
          V  DN++W
Sbjct: 76 VTPDNYIW 83


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 3   KLDNHLW 9
           K+D+++W
Sbjct: 723 KVDSYVW 729


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 3   KLDNHLW 9
           K+D+++W
Sbjct: 723 KVDSYVW 729


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 2    VKLDNH 7
            ++LDNH
Sbjct: 1459 LRLDNH 1464


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2    VKLDNH 7
            ++LDNH
Sbjct: 1459 LRLDNH 1464




86|SequenceR|435|426|PSGILAVKLD

>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United

Query: 1   PSGILAVKLD 10
           P G+ ++KLD
Sbjct: 100 PCGLRSIKLD 109


>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)

Query: 1   PSGILAVKLD 10
           P G LAV+L+
Sbjct: 340 PRGSLAVRLE 349


>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40

Query: 1  PSGILAVK 8
          P G+LA+K
Sbjct: 41 PPGVLALK 48


>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)

Query: 2  SGILAVKLD 10
          SG+ A KLD
Sbjct: 58 SGMSAAKLD 66


>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41

Query: 1  PSGILAVK 8
          P G+LA+K
Sbjct: 41 PPGVLALK 48


>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)

Query: 2  SGILAVKLD 10
          SG+ A KLD
Sbjct: 58 SGLNAAKLD 66


>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)

Query: 2  SGILAVKLD 10
          SG+ A KLD
Sbjct: 58 SGLNAAKLD 66


>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)

Query: 2  SGILAVKLD 10
          SG+ A KLD
Sbjct: 58 SGLNAAKLD 66


>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)

Query: 2  SGILAVKLD 10
          SG+ A KLD
Sbjct: 58 SGMNAAKLD 66


>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)

Query: 2  SGILAVKLD 10
          SG+ A KLD
Sbjct: 58 SGMNAAKLD 66


>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 2  SGILAVKLD 10
          SG+ A KLD
Sbjct: 58 SGMNAAKLD 66


>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)

Query: 2  SGILAVKLD 10
          SG+ A KLD
Sbjct: 58 SGMNAAKLD 66


>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)

Query: 2  SGILAVKLD 10
          SG+ A KLD
Sbjct: 58 SGMNAAKLD 66


>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 2  SGILAVKLD 10
          SG+ A KLD
Sbjct: 58 SGMNAAKLD 66


>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)

Query: 2  SGILAVKLD 10
          SG+ A KLD
Sbjct: 58 SGMNAAKLD 66


>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)

Query: 2  SGILAVKLD 10
          SG+ A KLD
Sbjct: 58 SGMNAAKLD 66


>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 2  SGILAVKLD 10
          SG+ A KLD
Sbjct: 58 SGMNAAKLD 66


>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 2  SGILAVKLD 10
          SG+ A KLD
Sbjct: 58 SGMNAAKLD 66




87|SequenceR|440|431|YTLDVPSGIL

>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)

Query: 2   TLDVPSGI 9
           T+DVP G+
Sbjct: 689 TVDVPEGV 696


>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   TLDVPSGI 9
           T+DVP G+
Sbjct: 689 TVDVPEGV 696


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2    TLDVPSG 8
            TLD P+G
Sbjct: 1632 TLDFPTG 1638


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2    TLDVPSG 8
            TLD P+G
Sbjct: 1632 TLDFPTG 1638


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2    TLDVPSG 8
            TLD P+G
Sbjct: 1628 TLDYPTG 1634


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3    LDVPSGIL 10
            L +PSGI+
Sbjct: 6491 LKLPSGIM 6498


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 2    TLDVPSG 8
            TLD P G
Sbjct: 1626 TLDFPKG 1632


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 2    TLDVPSG 8
            TLD P G
Sbjct: 1624 TLDFPKG 1630


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2    TLDVPSG 8
            TLD P G
Sbjct: 1624 TLDFPKG 1630


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 1    YTLDVP 6
            Y LD+P
Sbjct: 1597 YVLDIP 1602


>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United

Query: 1   YTLDVP 6
           YT D+P
Sbjct: 439 YTTDIP 444




88|SequenceR|445|436|LHDYTYTLDV

>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)

Query: 3   DYTYTLDV 10
           D TYT+DV
Sbjct: 255 DQTYTMDV 262


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 3    DYTYTLDV 10
            DYTY L++
Sbjct: 1198 DYTYNLEL 1205


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 3    DYTYTLDV 10
            DYTY L++
Sbjct: 1198 DYTYNLEL 1205


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 3    DYTYTLDV 10
            DYTY L++
Sbjct: 1198 DYTYNLEL 1205


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 3    DYTYTLDV 10
            DYTY L++
Sbjct: 1198 DYTYNLEL 1205


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 3    DYTYTLDV 10
            DYTY L++
Sbjct: 1198 DYTYNLEL 1205


>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)

Query: 3   DYTYTLDV 10
           D TY++DV
Sbjct: 253 DQTYSMDV 260


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 1    LHDYTYTLD 9
            L+DY Y +D
Sbjct: 1943 LNDYNYEMD 1951


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 1    LHDYTYTLD 9
            L+DY Y +D
Sbjct: 1942 LNDYNYEMD 1950


>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1

Query: 1   LHDYTYTLD 9
           L DY YTL+
Sbjct: 304 LADYLYTLN 312


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 1    LHDYTYTLD 9
            L+DY Y +D
Sbjct: 1951 LNDYNYEMD 1959


>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United

Query: 2   HDYTYTL 8
           HDYT  L
Sbjct: 297 HDYTMNL 303


>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11])

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 4    YTYTLDV 10
            Y YTLD+
Sbjct: 2030 YKYTLDM 2036


>sp|NSP6_ROTHL|NON-STRUCTURAL protein 6|Rotavirus A (strain

Query: 2  HDYTYTLDV 10
          HD   TLDV
Sbjct: 78 HDLQATLDV 86


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 2   HDYTYTLDV 10
           H+Y +TL +
Sbjct: 587 HNYDFTLKI 595


>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United

Query: 2   HDYTYTLD 9
           H+YTY+ +
Sbjct: 262 HEYTYSYE 269


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 1    LHDYTYTLDV 10
            +  Y YTLD+
Sbjct: 2027 IFSYKYTLDM 2036


>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)

Query: 1  LHDYTY 6
          LHDY+Y
Sbjct: 91 LHDYSY 96


>sp|NSP6_ROTHB|NON-STRUCTURAL protein 6|Rotavirus A (strain

Query: 2  HDYTYTLD 9
          HD+  TLD
Sbjct: 78 HDHLATLD 85


>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 1   LHDYTYTLDV 10
           LHD  +TL V
Sbjct: 236 LHDPNFTLQV 245




89|SequenceR|450|441|KPSDGLHDYT

>sp|GLRX1_VARV|GLUTAREDOXIN-1 virus

Query: 1  KPSDGLHDY 9
          KP + LHDY
Sbjct: 52 KPENKLHDY 60


>sp|GLRX1_VAR67|GLUTAREDOXIN-1 virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1  KPSDGLHDY 9
          KP + LHDY
Sbjct: 52 KPENKLHDY 60


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1    KPSDGLHDY 9
            KPS G HD+
Sbjct: 3229 KPSSGWHDW 3237


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1    KPSDGLHDY 9
            KPS G HD+
Sbjct: 3227 KPSHGWHDW 3235


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1    KPSDGLHDY 9
            KPS G HD+
Sbjct: 3227 KPSHGWHDW 3235


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1    KPSDGLHDY 9
            KPS G HD+
Sbjct: 3227 KPSHGWHDW 3235


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1    KPSDGLHDY 9
            KPS G HD+
Sbjct: 3227 KPSHGWHDW 3235


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1    KPSDGLHDY 9
            +PS G HD+
Sbjct: 3185 QPSKGWHDW 3193


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1    KPSDGLHDY 9
            +PS G HD+
Sbjct: 3185 QPSKGWHDW 3193


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1    KPSDGLHDY 9
            +PS G HD+
Sbjct: 3185 QPSKGWHDW 3193


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1    KPSDGLHDY 9
            +PS G HD+
Sbjct: 3185 QPSKGWHDW 3193


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1    KPSDGLHDY 9
            +PS G HD+
Sbjct: 3185 QPSKGWHDW 3193


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1    KPSDGLHDY 9
            KPS G H++
Sbjct: 3224 KPSTGWHNW 3232


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5    GLHDY 9
            GLHDY
Sbjct: 2150 GLHDY 2154


>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4   DGLHDY 9
           DGL+DY
Sbjct: 246 DGLNDY 251


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    KPSDGLHDYT 10
            +PS G +D+T
Sbjct: 3186 EPSRGWNDWT 3195


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    KPSDGLHDYT 10
            +PS G +D+T
Sbjct: 3183 EPSRGWNDWT 3192


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    KPSDGLHDYT 10
            +PS G +D+T
Sbjct: 3186 EPSRGWNDWT 3195


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    KPSDGLHDYT 10
            +PS G +D+T
Sbjct: 3186 EPSRGWNDWT 3195


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 1    KPSDGLHDYT 10
            +PS G +D+T
Sbjct: 3186 EPSRGWNDWT 3195


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    KPSDGLHDYT 10
            +PS G +D+T
Sbjct: 3186 EPSRGWNDWT 3195


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    KPSDGLHDYT 10
            +PS G +D+T
Sbjct: 3186 EPSRGWNDWT 3195


>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   DGLHDY 9
           DGL+DY
Sbjct: 246 DGLNDY 251


>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)

Query: 4   DGLHDY 9
           DGL+DY
Sbjct: 246 DGLNDY 251


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 1   KPSDGL 6
           KPSDG+
Sbjct: 783 KPSDGV 788


>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24

Query: 3  SDGLHDY 9
          +DGLH++
Sbjct: 9  TDGLHEW 15


>sp|GLRX1_VACCT|GLUTAREDOXIN-1 virus (strain Tian Tan)

Query: 1  KPSDGLHDY 9
          KP + L DY
Sbjct: 52 KPENELRDY 60


>sp|GLRX1_VACCP|GLUTAREDOXIN-1 virus (strain L-IVP) (VACV)

Query: 1  KPSDGLHDY 9
          KP + L DY
Sbjct: 52 KPENELRDY 60


>sp|GLRX1_VACCC|GLUTAREDOXIN-1 virus (strain Copenhagen) (VACV)

Query: 1  KPSDGLHDY 9
          KP + L DY
Sbjct: 52 KPENELRDY 60


>sp|GLRX1_VACCA|GLUTAREDOXIN-1 virus (strain Ankara) (VACV)

Query: 1  KPSDGLHDY 9
          KP + L DY
Sbjct: 52 KPENELRDY 60


>sp|GLRX1_MONPV|GLUTAREDOXIN-1 virus (MPXV)

Query: 1  KPSDGLHDY 9
          KP + L DY
Sbjct: 52 KPENELRDY 60


>sp|GLRX1_CWPXG|GLUTAREDOXIN-1 virus (strain GRI-90 /

Query: 1  KPSDGLHDY 9
          KP + L DY
Sbjct: 52 KPENELRDY 60


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 5    GLHDYT 10
            GLH YT
Sbjct: 2156 GLHSYT 2161


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2    PSDGLHDYT 10
            P  GL+ YT
Sbjct: 1330 PGQGLNGYT 1338


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 3   SDGLHDY 9
           ++GLH+Y
Sbjct: 426 TEGLHNY 432


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    PSDGLHDYT 10
            P  GL+ YT
Sbjct: 1330 PGQGLNGYT 1338


>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate

Query: 3   SDGLHDY 9
           SDG H Y
Sbjct: 354 SDGHHSY 360


>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)

Query: 1   KPSDGLHDY 9
           KP DG+  Y
Sbjct: 371 KPDDGITPY 379


>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 5   GLHDY 9
           G HDY
Sbjct: 856 GFHDY 860


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 5   GLHDY 9
           G HDY
Sbjct: 856 GFHDY 860


>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain

Query: 3   SDGLHDY 9
           SDG H Y
Sbjct: 354 SDGHHSY 360


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 1    KPSDGLHDY 9
            K SDG H Y
Sbjct: 1804 KISDGAHLY 1812


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 1    KPSDGLHDY 9
            K SDG H Y
Sbjct: 1804 KISDGAHLY 1812


>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   KPSDGLH 7
           KPS G H
Sbjct: 501 KPSKGSH 507


>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)

Query: 2  PSDGLHDY 9
          P D L+DY
Sbjct: 60 PVDVLYDY 67


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 4   DGLHDYT 10
           DG H YT
Sbjct: 371 DGWHGYT 377


>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United

Query: 5   GLHDYT 10
           G HDYT
Sbjct: 295 GSHDYT 300


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 4   DGLHDYT 10
           DGL+D T
Sbjct: 651 DGLNDVT 657


>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 4   DGLHDYT 10
           DGL+D T
Sbjct: 651 DGLNDVT 657


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 3   SDGLHDY 9
           ++GLH+Y
Sbjct: 429 TEGLHNY 435




90|SequenceR|455|446|IDQLIKPSDG

>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)

Query: 1   IDQLIKPS 8
           +DQ +KP+
Sbjct: 332 VDQFVKPA 339


>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   IDQLIKPS 8
           +DQ +KP+
Sbjct: 332 VDQFVKPA 339


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2    DQLIKP 7
            DQLI+P
Sbjct: 1236 DQLIRP 1241


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 2    DQLIKP 7
            DQLI+P
Sbjct: 1236 DQLIRP 1241


>sp|VE7_HPV17|PROTEIN E7|Human papillomavirus 17

Query: 1  IDQLIKPSD 9
          + QL++P+D
Sbjct: 15 LQQLVQPTD 23


>sp|UL101_HCMVA|UNCHARACTERIZED protein UL101|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  QLIKPSDG 10
          QL++PS G
Sbjct: 80 QLVRPSRG 87


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 2  DQLIKPS 8
          D+L+KP+
Sbjct: 76 DELVKPT 82


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 2  DQLIKPS 8
          D+L+KP+
Sbjct: 76 DELVKPT 82


>sp|HBSAG_HBVC6|SMALL envelope protein|Hepatitis B virus genotype C

Query: 6   KPSDG 10
           KPSDG
Sbjct: 141 KPSDG 145


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1   IDQLIKPSD 9
           ID+ +KP D
Sbjct: 451 IDKELKPCD 459


>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D

Query: 6   KPSDG 10
           KPSDG
Sbjct: 304 KPSDG 308


>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D

Query: 6   KPSDG 10
           KPSDG
Sbjct: 304 KPSDG 308


>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D

Query: 6   KPSDG 10
           KPSDG
Sbjct: 304 KPSDG 308


>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C

Query: 6   KPSDG 10
           KPSDG
Sbjct: 315 KPSDG 319


>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D

Query: 6   KPSDG 10
           KPSDG
Sbjct: 304 KPSDG 308


>sp|HBSAG_HBVD1|LARGE envelope protein|Hepatitis B virus genotype D

Query: 6   KPSDG 10
           KPSDG
Sbjct: 304 KPSDG 308


>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D

Query: 6   KPSDG 10
           KPSDG
Sbjct: 304 KPSDG 308


>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C

Query: 6   KPSDG 10
           KPSDG
Sbjct: 315 KPSDG 319


>sp|HBSAG_HBVCJ|LARGE envelope protein|Hepatitis B virus genotype C

Query: 6   KPSDG 10
           KPSDG
Sbjct: 315 KPSDG 319


>sp|HBSAG_HBVC1|LARGE envelope protein|Hepatitis B virus genotype C

Query: 6   KPSDG 10
           KPSDG
Sbjct: 315 KPSDG 319


>sp|HBSAG_HBVC2|LARGE envelope protein|Hepatitis B virus genotype C

Query: 6   KPSDG 10
           KPSDG
Sbjct: 315 KPSDG 319


>sp|HBSAG_HBVH1|LARGE envelope protein|Hepatitis B virus genotype H

Query: 6   KPSDG 10
           KPSDG
Sbjct: 315 KPSDG 319


>sp|HBSAG_HBVG3|LARGE envelope protein|Hepatitis B virus genotype G

Query: 6   KPSDG 10
           KPSDG
Sbjct: 314 KPSDG 318


>sp|HBSAG_HBVC8|LARGE envelope protein|Hepatitis B virus genotype C

Query: 6   KPSDG 10
           KPSDG
Sbjct: 304 KPSDG 308


>sp|HBSAG_HBVC5|LARGE envelope protein|Hepatitis B virus genotype C

Query: 6   KPSDG 10
           KPSDG
Sbjct: 315 KPSDG 319


>sp|HBSAG_HBVC3|LARGE envelope protein|Hepatitis B virus genotype C

Query: 6   KPSDG 10
           KPSDG
Sbjct: 315 KPSDG 319


>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C

Query: 6   KPSDG 10
           KPSDG
Sbjct: 315 KPSDG 319


>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H

Query: 6   KPSDG 10
           KPSDG
Sbjct: 315 KPSDG 319


>sp|HBSAG_HBVC4|LARGE envelope protein|Hepatitis B virus genotype C

Query: 6   KPSDG 10
           KPSDG
Sbjct: 315 KPSDG 319


>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H

Query: 6   KPSDG 10
           KPSDG
Sbjct: 315 KPSDG 319




91|SequenceR|460|451|HSGSAIDQLI

>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 1   HSGSAIDQL 9
           +SG++ID+L
Sbjct: 742 YSGNSIDEL 750


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 4    SAIDQLI 10
            SAID+LI
Sbjct: 1039 SAIDELI 1045


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3    GSAIDQLI 10
            G+A+DQ I
Sbjct: 3724 GNALDQAI 3731


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3    GSAIDQLI 10
            G+A+DQ I
Sbjct: 3701 GNALDQAI 3708


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3    GSAIDQLI 10
            G+A+DQ I
Sbjct: 3724 GNALDQAI 3731


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3    GSAIDQLI 10
            G+A+DQ I
Sbjct: 3701 GNALDQAI 3708




92|SequenceR|465|456|VQSFPHSGSA

>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2   QSFPHSGSA 10
           +  PHSG+A
Sbjct: 479 EQLPHSGNA 487


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 2   QSFPHSGSA 10
           +  PHSG+A
Sbjct: 479 EQLPHSGNA 487


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2   QSFPHSGSA 10
           +  PHSG+A
Sbjct: 479 EQLPHSGNA 487


>sp|VGF_VARV|PRO-VARIOLA growth factor|Variola virus

Query: 1  VQSFPHSGSA 10
          ++SF +SG+A
Sbjct: 15 IRSFANSGNA 24


>sp|VGF_VAR67|PRO-VARIOLA growth factor|Variola virus (isolate Human/India/Ind3/1967)

Query: 1  VQSFPHSGSA 10
          ++SF +SG+A
Sbjct: 15 IRSFANSGNA 24


>sp|VGF_VACCT|PRO-VACCINIA growth factor|Vaccinia virus (strain Tian Tan)

Query: 1  VQSFPHSGSA 10
          ++SF  SG+A
Sbjct: 15 IRSFADSGNA 24


>sp|VGF_VACCP|PRO-VACCINIA growth factor|Vaccinia virus (strain L-IVP) (VACV)

Query: 1  VQSFPHSGSA 10
          ++SF  SG+A
Sbjct: 15 IRSFADSGNA 24


>sp|VGF_VACCC|PRO-VACCINIA growth factor|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  VQSFPHSGSA 10
          ++SF  SG+A
Sbjct: 15 IRSFADSGNA 24


>sp|VGF_VACCA|PRO-VACCINIA growth factor|Vaccinia virus (strain Ankara) (VACV)

Query: 1  VQSFPHSGSA 10
          ++SF  SG+A
Sbjct: 15 IRSFADSGNA 24




93|SequenceR|470|461|KAEKLVQSFP

>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 2    AEKLVQS 8
            +EKLVQS
Sbjct: 2104 SEKLVQS 2110




94|SequenceR|475|466|VVMPKKAEKL

>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 2    VMPKKAEK 9
            +MPKKA+K
Sbjct: 2037 IMPKKADK 2044


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 2    VMPKKAEK 9
            +MPKKA+K
Sbjct: 2037 IMPKKADK 2044


>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)

Query: 4   PKKAEKL 10
           PKK+E+L
Sbjct: 218 PKKSEQL 224


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 3    MPKKAEKL 10
            MPK  EKL
Sbjct: 2717 MPKVIEKL 2724


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 2   VMPKKAEKL 10
           + PKK EKL
Sbjct: 473 LQPKKEEKL 481


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 2   VMPKKAEKL 10
           + PKK EKL
Sbjct: 473 LQPKKEEKL 481


>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   VMPKKAEKL 10
           ++PK  EKL
Sbjct: 106 LIPKSPEKL 114




95|SequenceR|480|471|ASSGLVVMPK

>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 4  GLVVMPK 10
          GLV+ PK
Sbjct: 92 GLVIFPK 98


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4  GLVVMPK 10
          GLV+ PK
Sbjct: 92 GLVIFPK 98


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1    ASSGLVVM 8
            A++GL+VM
Sbjct: 1395 AAAGLIVM 1402


>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43

Query: 2  SSGLVVMPK 10
          SSG + +PK
Sbjct: 82 SSGKITVPK 90




96|SequenceR|485|476|DNRQLASSGL

 ***** No hits found ******


97|SequenceR|490|481|LIAAGDNRQL

>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63

Query: 3   AAGDNRQ 9
           A GDNRQ
Sbjct: 140 ATGDNRQ 146


>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain

Query: 4   AGDNRQL 10
           AGDNR+L
Sbjct: 272 AGDNRKL 278


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 3    AAGDNR 8
            AAGDNR
Sbjct: 1185 AAGDNR 1190


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 3    AAGDNR 8
            AAGDNR
Sbjct: 1185 AAGDNR 1190


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   LIAAGDNRQ 9
           L  AGD+RQ
Sbjct: 470 LSEAGDDRQ 478


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4   AGDNRQ 9
           AGD+RQ
Sbjct: 482 AGDDRQ 487


>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)

Query: 1  LIAAGDNRQL 10
          + AAG  RQL
Sbjct: 1  MAAAGGERQL 10




98|SequenceR|495|486|SSVAALIAAG

>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 1   SSVAALIAA 9
           SSVA +IAA
Sbjct: 263 SSVAPIIAA 271




99|SequenceR|500|491|IKQAISSVAA

>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)

Query: 1   IKQAISSVA 9
           + QA++SVA
Sbjct: 742 VSQALNSVA 750




100|SequenceR|505|496|GSTMRIKQAI

 ***** No hits found ******


101|SequenceR|510|501|WDGTVGSTMR

>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 3    GTVGSTMR 10
            GT+ ST+R
Sbjct: 4223 GTISSTVR 4230


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3    GTVGSTMR 10
            GT+ ST+R
Sbjct: 4223 GTISSTVR 4230


>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain

Query: 2   DGTVGSTM 9
           DG V STM
Sbjct: 795 DGVVMSTM 802


>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   GTVGSTM 9
           GT GSTM
Sbjct: 516 GTAGSTM 522


>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   GTVGSTM 9
           GT GSTM
Sbjct: 518 GTAGSTM 524


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 3    GTVGSTMR 10
            GT+ ST+R
Sbjct: 4261 GTLSSTIR 4268


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 3    GTVGSTMR 10
            GT+ ST+R
Sbjct: 4281 GTLSSTIR 4288


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 3    GTVGSTMR 10
            GT+ ST+R
Sbjct: 4311 GTLSSTIR 4318


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3    GTVGSTMR 10
            GT+ ST+R
Sbjct: 4261 GTLSSTIR 4268


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3    GTVGSTMR 10
            GT+ ST+R
Sbjct: 4281 GTLSSTIR 4288


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3    GTVGSTMR 10
            GT+ ST+R
Sbjct: 4311 GTLSSTIR 4318


>sp|E434_ADE02|EARLY 4 ORF6 protein|Human adenovirus C serotype 2

Query: 1   WDGTVGSTM 9
           +DG VGS +
Sbjct: 193 YDGHVGSVV 201




102|SequenceR|515|506|INMVKWDGTV

>sp|VE4_HPV5B|PROTEIN E4|Human papillomavirus type 5b

Query: 3   MVKWDG 8
           +VKW+G
Sbjct: 211 LVKWEG 216


>sp|VE4_HPV05|PROTEIN E4|Human papillomavirus 5

Query: 3   MVKWDG 8
           +VKW+G
Sbjct: 211 LVKWEG 216


>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United

Query: 1   INMVKWDGT 9
           IN+ + DGT
Sbjct: 299 INLTELDGT 307


>sp|CAHH_VARV|CELL surface-binding protein OPG105|Variola virus

Query: 1  INMVKWD 7
          IN+V W+
Sbjct: 91 INLVHWN 97


>sp|CAHH_VAR67|CELL surface-binding protein OPG105|Variola virus (isolate

Query: 1  INMVKWD 7
          IN+V W+
Sbjct: 91 INLVHWN 97


>sp|CAHH_VACCT|CELL surface-binding protein OPG105|Vaccinia virus (strain Tian Tan)

Query: 1  INMVKWD 7
          IN+V W+
Sbjct: 91 INLVHWN 97


>sp|CAHH_VACCC|CELL surface-binding protein OPG105|Vaccinia virus (strain Copenhagen)

Query: 1  INMVKWD 7
          IN+V W+
Sbjct: 91 INLVHWN 97


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 5  KWDGTV 10
          KWDG +
Sbjct: 70 KWDGVL 75


>sp|CAHH_VACCA|CELL surface-binding protein OPG105|Vaccinia virus (strain Ankara)

Query: 1  INMVKWD 7
          IN+V W+
Sbjct: 91 INLVHWN 97


>sp|CAHH_MONPV|CELL surface-binding protein OPG105|Monkeypox virus (MPXV)

Query: 1  INMVKWD 7
          IN+V W+
Sbjct: 91 INLVHWN 97


>sp|CAHH_MONPZ|CELL surface-binding protein OPG105|Monkeypox virus (strain

Query: 1  INMVKWD 7
          IN+V W+
Sbjct: 91 INLVHWN 97


>sp|VP2_SOUV3|MINOR capsid protein VP2|Southampton virus (strain GI/Human/United

Query: 3   MVKWDGT 9
           ++ W+GT
Sbjct: 97  LIDWNGT 103


>sp|NP1_HBOC1|NON-STRUCTURAL protein NP-1|Primate bocaparvovirus 1 (strain Human

Query: 2   NMVKWDGT 9
           N + WD T
Sbjct: 140 NKIGWDNT 147


>sp|RP35_VACCT|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Tian Tan)

Query: 2  NMVKW 6
          N+VKW
Sbjct: 28 NLVKW 32


>sp|RP35_VACCC|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  NMVKW 6
          N+VKW
Sbjct: 28 NLVKW 32


>sp|RP35_VACCA|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2  NMVKW 6
          N+VKW
Sbjct: 28 NLVKW 32


>sp|RP35_MONPV|DNA-DIRECTED RNA polymerase 35 kDa|Monkeypox virus (MPXV)

Query: 2  NMVKW 6
          N+VKW
Sbjct: 28 NLVKW 32


>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate

Query: 2  NMVKW 6
          N+VKW
Sbjct: 28 NLVKW 32


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 1    INMVKWDGT 9
            ++  KWD T
Sbjct: 1448 LDYSKWDST 1456


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 4    VKWDGT 9
             KWDG+
Sbjct: 1567 AKWDGS 1572


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 1    INMVKWDGT 9
            ++  KWD T
Sbjct: 1447 LDYSKWDST 1455


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 1    INMVKWDGT 9
            ++  KWD T
Sbjct: 1447 LDYSKWDST 1455




103|SequenceR|520|511|AIRHLINMVK

>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   IRHLINMVK 10
           ++H+I M+K
Sbjct: 103 VKHMITMMK 111


>sp|NSP2_ROTHK|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 1   AIRHLINMV 9
           ++RHL N+V
Sbjct: 107 SVRHLENLV 115


>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)

Query: 2   IRHLINMVK 10
           ++H+I M+K
Sbjct: 103 VKHMITMMK 111


>sp|NSP2_ROTH3|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])

Query: 1   AIRHLINMV 9
           ++RHL N+V
Sbjct: 107 SVRHLENLV 115


>sp|NSP2_ROTAD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United

Query: 1   AIRHLINMV 9
           ++RHL N+V
Sbjct: 107 SVRHLENLV 115


>sp|NSP2_ROTHP|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United

Query: 1   AIRHLINMV 9
           ++RHL N+V
Sbjct: 107 SVRHLENLV 115


>sp|NSP2_ROT41|NON-STRUCTURAL protein 2|Rotavirus A (isolate

Query: 1   AIRHLINMV 9
           ++RHL N+V
Sbjct: 107 SVRHLENLV 115


>sp|NSP2_ROTHD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United

Query: 1   AIRHLINMV 9
           ++RHL N+V
Sbjct: 107 SVRHLENLV 115


>sp|NSP2_ROTHL|NON-STRUCTURAL protein 2|Rotavirus A (strain

Query: 1   AIRHLINMV 9
           ++RHL N+V
Sbjct: 107 SVRHLENLV 115


>sp|NSP2_ROTHW|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United

Query: 1   AIRHLINMV 9
           ++RHL N+V
Sbjct: 107 SVRHLENLV 115


>sp|NSP2_ROTH7|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United

Query: 1   AIRHLINMV 9
           ++RHL N+V
Sbjct: 107 SVRHLENLV 115


>sp|NSP2_ROTHT|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United

Query: 1   AIRHLINMV 9
           ++RHL N+V
Sbjct: 107 SVRHLENLV 115


>sp|NSP2_ROTH6|NON-STRUCTURAL protein 2|Rotavirus A (strain

Query: 1   AIRHLINMV 9
           ++RHL N+V
Sbjct: 107 SVRHLENLV 115


>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)

Query: 1   AIRHLINMV 9
           A+ HL N++
Sbjct: 304 AVGHLFNLI 312


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 2    IRHLINMV 9
            I HL+N V
Sbjct: 1273 ISHLVNCV 1280


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2    IRHLINMV 9
            I HL+N V
Sbjct: 1273 ISHLVNCV 1280




104|SequenceR|525|516|AAVQSAIRHL

>sp|UL140_HCMVM|PROTEIN UL140|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   AVQSAIRH 9
           AVQ+A+RH
Sbjct: 173 AVQNALRH 180


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 2   AVQSAIRH 9
           A+Q A++H
Sbjct: 876 AIQQALQH 883




105|SequenceR|530|521|YGLDLAAVQS

>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   LDLAAVQS 10
           +D+A VQS
Sbjct: 405 MDIAGVQS 412


>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   YGLDLAAV 8
           YG DLA V
Sbjct: 155 YGTDLAWV 162


>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   YGLDLAAV 8
           YG DLA V
Sbjct: 155 YGTDLAWV 162




106|SequenceR|535|526|EVGPKYGLDL

>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 5    KYGLDL 10
            KYGLDL
Sbjct: 1878 KYGLDL 1883


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 5    KYGLDL 10
            KYGLDL
Sbjct: 1878 KYGLDL 1883


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 5    KYGLDL 10
            KYGLDL
Sbjct: 1878 KYGLDL 1883


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 5    KYGLDL 10
            KYGLDL
Sbjct: 1878 KYGLDL 1883


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 5    KYGLDL 10
            KYGLDL
Sbjct: 1878 KYGLDL 1883


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1    EVGPKYGLDL 10
            E+G KY  DL
Sbjct: 2060 ELGNKYAYDL 2069


>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus

Query: 5   KYGLDL 10
           KYG+DL
Sbjct: 168 KYGIDL 173


>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate

Query: 5   KYGLDL 10
           KYG+DL
Sbjct: 168 KYGIDL 173


>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen

Query: 5   KYGLDL 10
           KYG+DL
Sbjct: 165 KYGIDL 170


>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain

Query: 5   KYGLDL 10
           KYG+DL
Sbjct: 167 KYGIDL 172


>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)

Query: 5   KYGLDL 10
           KYG+DL
Sbjct: 165 KYGIDL 170


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 1    EVGPKYGLDL 10
            E+  KYG+DL
Sbjct: 1836 EMIDKYGIDL 1845


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 2   VGPKYG 7
           +GP+YG
Sbjct: 858 LGPRYG 863


Query: 5    KYGLDL 10
            KYG+DL
Sbjct: 1866 KYGIDL 1871


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 5    KYGLDL 10
            KYG+DL
Sbjct: 1865 KYGIDL 1870


>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1   EVGPKYGL 8
           E+GPK  L
Sbjct: 104 EIGPKVSL 111


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 5    KYGLDL 10
            KYG+DL
Sbjct: 1837 KYGVDL 1842


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 5    KYGLDL 10
            KYG+DL
Sbjct: 1844 KYGVDL 1849


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 5    KYGLDL 10
            KYG+DL
Sbjct: 1880 KYGVDL 1885


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 5    KYGLDL 10
            KYG+DL
Sbjct: 1844 KYGVDL 1849


>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus

Query: 1   EVGPKYGL 8
           E+GPK  L
Sbjct: 104 EIGPKVSL 111


>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)

Query: 1  EVGPKYGLDL 10
          E+G +Y LDL
Sbjct: 74 ELGGRYFLDL 83


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3   GPKYGLDL 10
           G  YG+DL
Sbjct: 133 GHSYGIDL 140


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3   GPKYGLDL 10
           G  YG+DL
Sbjct: 133 GHSYGIDL 140


>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2  VGPKYG 7
          +GP++G
Sbjct: 55 IGPRFG 60


>sp|ICP22_HHV2|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (HHV-2) (Human

Query: 1  EVGPKYGLDL 10
          E+G +Y LDL
Sbjct: 74 ELGGRYFLDL 83


>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3   GPKYGLDL 10
           G  YGLDL
Sbjct: 328 GRAYGLDL 335


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    VGPKYGL 8
            +GP YG 
Sbjct: 2606 MGPSYGF 2612


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2    VGPKYGL 8
            +GP YG 
Sbjct: 2629 MGPSYGF 2635


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1878 KYGLNL 1883


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1878 KYGLNL 1883


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1888 KYGLNL 1893


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1876 KYGLNL 1881


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1881 KYGLNL 1886


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1869 KYGLNL 1874


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1869 KYGLNL 1874


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1868 KYGLNL 1873


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1868 KYGLNL 1873


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1886 KYGLNL 1891


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1872 KYGLNL 1877


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1879 KYGLNL 1884


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1867 KYGLNL 1872


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2    VGPKYGL 8
            +GP YG 
Sbjct: 2629 MGPSYGF 2635


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1870 KYGLNL 1875


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1880 KYGLNL 1885


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1870 KYGLNL 1875


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 5    KYGLDL 10
            KYGL+L
Sbjct: 1870 KYGLNL 1875


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2    VGPKYGL 8
            +GP YG 
Sbjct: 2610 MGPSYGF 2616


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2    VGPKYGL 8
            +GP YG 
Sbjct: 2610 MGPSYGF 2616


>sp|VTF3L_VACCT|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Tian Tan)

Query: 1  EVGPKYGL 8
          E+G  YGL
Sbjct: 29 EIGDIYGL 36


>sp|VTF3L_VACCA|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Ankara)

Query: 1  EVGPKYGL 8
          E+G  YGL
Sbjct: 29 EIGDIYGL 36


>sp|VTF3L_MONPZ|INTERMEDIATE transcription factor 3 large|Monkeypox virus (strain

Query: 1  EVGPKYGL 8
          E+G  YGL
Sbjct: 29 EIGDIYGL 36


>sp|VITF3_VARV|INTERMEDIATE transcription factor 3 large|Variola virus

Query: 1  EVGPKYGL 8
          E+G  YGL
Sbjct: 29 EIGDIYGL 36


>sp|VITF3_VAR67|INTERMEDIATE transcription factor 3 large|Variola virus (isolate

Query: 1  EVGPKYGL 8
          E+G  YGL
Sbjct: 29 EIGDIYGL 36


>sp|VITF3_VACCC|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Copenhagen)

Query: 1  EVGPKYGL 8
          E+G  YGL
Sbjct: 29 EIGDIYGL 36


>sp|VITF3_MONPV|INTERMEDIATE transcription factor 3 large|Monkeypox virus (MPXV)

Query: 1  EVGPKYGL 8
          E+G  YGL
Sbjct: 29 EIGDIYGL 36


>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1

Query: 3   GPKYG 7
           GP+YG
Sbjct: 277 GPQYG 281




107|SequenceR|540|531|NKRIAEVGPK

>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)

Query: 1   NKRIAEVGPK 10
           +KR+  VGP+
Sbjct: 203 HKRVINVGPR 212


>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])

Query: 1   NKRIAEVGPK 10
           +KR+  VGP+
Sbjct: 203 HKRVINVGPR 212


>sp|IR03_HCMVA|UNCHARACTERIZED protein IRL3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  KRIAEVGP 9
          +R AEVGP
Sbjct: 21 RRHAEVGP 28


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 1    NKRIAEVGP 9
            N+R AEV P
Sbjct: 996  NERPAEVDP 1004


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 1    NKRIAEVGP 9
            N+R AEV P
Sbjct: 996  NERPAEVDP 1004


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 1   NKRIAEV 7
           NK IAEV
Sbjct: 891 NKHIAEV 897


>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate

Query: 1  NKRIAEVG 8
          NKR+ ++G
Sbjct: 64 NKRLTQIG 71


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2  KRIAEVGP 9
          KR+A V P
Sbjct: 18 KRLASVSP 25




108|SequenceR|545|536|LVKPPNKRIA

>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4

Query: 2   VKPPNKRIA 10
           ++PP KRIA
Sbjct: 180 IEPPTKRIA 188


>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2   VKPPNKR 8
           VKP NKR
Sbjct: 507 VKPRNKR 513


>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65

Query: 3   KPPNKRIA 10
           +PP KRIA
Sbjct: 178 EPPTKRIA 185


>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)

Query: 1  LVKPPNKR 8
          L+KPP K+
Sbjct: 68 LLKPPTKK 75


>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain

Query: 4   PPNKR 8
           PPN+R
Sbjct: 487 PPNRR 491


>sp|DUT_ORFN2|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Orf virus (strain NZ2) (OV

Query: 1  LVKPPN 6
          L+KPP+
Sbjct: 54 LIKPPS 59


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 5    PNKRIA 10
            PNKR++
Sbjct: 1622 PNKRVS 1627


>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus

Query: 3   KPPNKRI 9
           +PP KR+
Sbjct: 319 EPPQKRL 325


>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus

Query: 3   KPPNKRI 9
           +PP KR+
Sbjct: 319 EPPQKRL 325




109|SequenceR|550|541|AGLLFLVKPP

>sp|PG166_MONPV|PROTEIN OPG166|Monkeypox virus (MPXV)

Query: 2   GLLFLVKPP 10
           GLLFLV  P
Sbjct: 262 GLLFLVCFP 270


>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus

Query: 1   AGLLFLVKPP 10
           AGL+  V PP
Sbjct: 316 AGLVANVAPP 325


>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)

Query: 4   LFLVKP 9
           +FL+KP
Sbjct: 538 IFLIKP 543


>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)

Query: 4   LFLVKP 9
           +FL+KP
Sbjct: 540 IFLIKP 545


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 1   AGLLFLVKPP 10
           AGL+  +K P
Sbjct: 903 AGLMSTIKTP 912


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 1   AGLLFLVKPP 10
           AGL+  +K P
Sbjct: 894 AGLMSTIKTP 903


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 1   AGLLFLVKPP 10
           AGL+  +K P
Sbjct: 895 AGLMSTIKTP 904


>sp|E1A_ADE12|EARLY E1A protein|Human adenovirus A serotype 12

Query: 4  LFLVKPP 10
          LFL +PP
Sbjct: 77 LFLPEPP 83




110|SequenceR|555|546|ICGGDAGLLF

>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 1   ICGGDAG 7
           +CGGD G
Sbjct: 498 VCGGDGG 504


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 1    ICGGDA 6
            +CGGD 
Sbjct: 1656 LCGGDG 1661


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1    ICGGDA 6
            +CGGD 
Sbjct: 1656 LCGGDG 1661


>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2   CGGDAGL 8
           C GD GL
Sbjct: 368 CWGDGGL 374


>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   CGGDAGL 8
           C GD GL
Sbjct: 368 CWGDGGL 374


>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60

Query: 1   ICGGDAG 7
           I GGD+G
Sbjct: 138 IVGGDSG 144


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 3   GGDAGLLF 10
           GGD  LL+
Sbjct: 987 GGDPNLLY 994


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 3   GGDAGLLF 10
           GGD  LL+
Sbjct: 987 GGDPNLLY 994


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 3   GGDAGLLF 10
           GGD  LL+
Sbjct: 987 GGDPNLLY 994


>sp|RNB_HHV2H|PROBABLE RNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 4  GDAGLL 9
          GD+GLL
Sbjct: 64 GDSGLL 69


>sp|RNB_HHV1M|RNA-BINDING protein|Human herpesvirus 1 (strain MP)

Query: 4  GDAGLL 9
          GD+GLL
Sbjct: 59 GDSGLL 64


>sp|RNB_HHV11|ACCESSORY factor US11|Human herpesvirus 1 (strain 17)

Query: 4  GDAGLL 9
          GD+GLL
Sbjct: 59 GDSGLL 64


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 2   CGGD 5
           CGGD
Sbjct: 108 CGGD 111


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 2   CGGD 5
           CGGD
Sbjct: 108 CGGD 111


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 2   CGGD 5
           CGGD
Sbjct: 107 CGGD 110


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 2   CGGD 5
           CGGD
Sbjct: 107 CGGD 110


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)

Query: 2   CGGD 5
           CGGD
Sbjct: 107 CGGD 110


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 2   CGGD 5
           CGGD
Sbjct: 107 CGGD 110


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1   ICGGDAGL 8
           IC G+A L
Sbjct: 858 ICRGEAAL 865


>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980

Query: 2   CGGD 5
           CGGD
Sbjct: 286 CGGD 289


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 1   ICGGDAGLL 9
           +C G  GLL
Sbjct: 631 VCQGIVGLL 639




111|SequenceR|560|551|LDQRTICGGD

>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1    LDQRTIC 7
            +DQRTIC
Sbjct: 4427 VDQRTIC 4433


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    LDQRTIC 7
            +D+RT+C
Sbjct: 4452 VDKRTVC 4458


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    LDQRTIC 7
            LD+RT C
Sbjct: 4781 LDKRTTC 4787


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    LDQRTIC 7
            LD+RT C
Sbjct: 4758 LDKRTTC 4764


>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 6   ICGGD 10
           +CGGD
Sbjct: 498 VCGGD 502


>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   LDQRTICG 8
           L+QR  CG
Sbjct: 338 LNQRLCCG 345


>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   LDQRTICG 8
           L+QR  CG
Sbjct: 338 LNQRLCCG 345


>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   LDQRTICG 8
           L+QR  CG
Sbjct: 338 LNQRLCCG 345


>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   LDQRTICG 8
           L+QR  CG
Sbjct: 338 LNQRLCCG 345


>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5

Query: 1   LDQRTICGGD 10
           LD R+  GGD
Sbjct: 113 LDDRSHWGGD 122


>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2

Query: 1   LDQRTICGGD 10
           LD R+  GGD
Sbjct: 113 LDDRSHWGGD 122


>sp|VE8E2_HPV33|PROTEIN E8^E2C|Human papillomavirus 33

Query: 3  QRTICGGD 10
          QRT+C  +
Sbjct: 74 QRTVCSSN 81


>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33

Query: 3   QRTICGGD 10
           QRT+C  +
Sbjct: 265 QRTVCSSN 272


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 6    ICGGD 10
            +CGGD
Sbjct: 1656 LCGGD 1660


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 6    ICGGD 10
            +CGGD
Sbjct: 1656 LCGGD 1660


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 4   RTICG 8
           RT+CG
Sbjct: 502 RTVCG 506


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 4   RTICG 8
           RT+CG
Sbjct: 502 RTVCG 506


>sp|SODL_CWPXB|CU-ZN superoxide dismutase-like protein OPG175|Cowpox virus (strain

Query: 2   DQRTICG 8
           DQR  CG
Sbjct: 97  DQRLACG 103


>sp|SODL_VARV|CU-ZN superoxide dismutase-like protein OPG175|Variola virus

Query: 2   DQRTICG 8
           DQR  CG
Sbjct: 97  DQRLACG 103


>sp|SODL_VAR67|CU-ZN superoxide dismutase-like protein OPG175|Variola virus (isolate

Query: 2   DQRTICG 8
           DQR  CG
Sbjct: 97  DQRLACG 103


>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12

Query: 1   LDQRTICGGD 10
            D+R+  GGD
Sbjct: 103 FDERSRWGGD 112


>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)

Query: 1   LDQRTICGGD 10
           LDQ  I  GD
Sbjct: 107 LDQGEISAGD 116


>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)

Query: 1   LDQRTICGGD 10
           LDQ  I  GD
Sbjct: 107 LDQGEISAGD 116


>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)

Query: 1   LDQRTICGGD 10
           LDQ  I  GD
Sbjct: 107 LDQGEISAGD 116


>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)

Query: 1   LDQRTICGGD 10
           LDQ  I  GD
Sbjct: 107 LDQGEISAGD 116


>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)

Query: 1   LDQRTICGGD 10
           LDQ  I  GD
Sbjct: 107 LDQGEISAGD 116


>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human

Query: 1   LDQRTICGGD 10
           LDQ  I  GD
Sbjct: 107 LDQGEISAGD 116


>sp|SODL_VACCU|CU-ZN superoxide dismutase-like protein OPG175|Vaccinia virus (strain

Query: 2   DQRTICG 8
           DQR  CG
Sbjct: 97  DQRLACG 103


>sp|SODL_VACCD|CU-ZN superoxide dismutase-like protein OPG175|Vaccinia virus (strain

Query: 2   DQRTICG 8
           DQR  CG
Sbjct: 97  DQRLACG 103


>sp|SODL_VACCA|CU-ZN superoxide dismutase-like protein|Vaccinia virus (strain Ankara)

Query: 2  DQRTICG 8
          DQR  CG
Sbjct: 93 DQRLACG 99


>sp|SODL_CWPXG|CU-ZN superoxide dismutase-like protein|Cowpox virus (strain GRI-90 /

Query: 2   DQRTICG 8
           DQR  CG
Sbjct: 97  DQRLACG 103


>sp|TEG7_HHV7J|TEGUMENT protein UL51 homolog|Human herpesvirus 7 (strain JI)

Query: 1   LDQRTIC 7
           +DQ T+C
Sbjct: 136 IDQTTLC 142


>sp|SODL_MONPZ|CU-ZN superoxide dismutase-like protein|Monkeypox virus (strain

Query: 2   DQRTICG 8
           DQR  CG
Sbjct: 97  DQRLACG 103


>sp|SODL_MONPV|CU-ZN superoxide dismutase-like protein OPG175|Monkeypox virus (MPXV)

Query: 2   DQRTICG 8
           DQR  CG
Sbjct: 97  DQRLACG 103


>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970

Query: 1   LDQRTICGG 9
           +D R +C G
Sbjct: 312 IDSRYVCSG 320


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    LDQRTICGG 9
            L +  +CGG
Sbjct: 5041 LSEYVLCGG 5049


>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   QRTICGG 9
           + T CGG
Sbjct: 128 EETTCGG 134


>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   QRTICGG 9
           + T CGG
Sbjct: 128 EETTCGG 134


>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971

Query: 1   LDQRTICGG 9
           +D R +C G
Sbjct: 312 IDSRYVCSG 320




112|SequenceR|565|556|FCDKPLDQRT

>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1    FCDKPLDQR 9
            +C  P+DQR
Sbjct: 2224 YCHDPMDQR 2232


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1    FCDKPLDQR 9
            +C  P+DQR
Sbjct: 2224 YCHDPMDQR 2232


>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   FCDKPLD 7
           FC KPLD
Sbjct: 179 FCAKPLD 185


>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 2  CDKPLDQR 9
          CD P D R
Sbjct: 28 CDAPFDDR 35


>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)

Query: 1   FCDKPLD 7
           FC KPLD
Sbjct: 179 FCVKPLD 185


>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain

Query: 2  CDKPLDQR 9
          CD P D R
Sbjct: 28 CDAPFDDR 35


>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)

Query: 1   FCDKPLDQRT 10
           FC KP+++ T
Sbjct: 281 FCGKPVNKDT 290


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    KPLDQR 9
            KPLD+R
Sbjct: 3156 KPLDER 3161


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    KPLDQR 9
            KPLD+R
Sbjct: 3156 KPLDER 3161


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    KPLDQR 9
            KPLD+R
Sbjct: 3156 KPLDER 3161


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    KPLDQR 9
            KPLD+R
Sbjct: 3156 KPLDER 3161


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    KPLDQR 9
            KPLD+R
Sbjct: 3156 KPLDER 3161


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1  FCDKPLDQR 9
          F D+PL+ R
Sbjct: 78 FSDRPLNLR 86


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1  FCDKPLDQR 9
          F D+PL+ R
Sbjct: 78 FSDRPLNLR 86


>sp|UL28_HCMVA|UNCHARACTERIZED protein UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   FCDKPLD 7
           FC  PLD
Sbjct: 333 FCFSPLD 339


>sp|VE6_HPV42|PROTEIN E6|Human papillomavirus 42

Query: 1   FCDKPLDQ 8
            C KPL Q
Sbjct: 106 LCQKPLSQ 113


>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   FCDKPLD 7
           FC  PLD
Sbjct: 655 FCFSPLD 661


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1  FCDKPLDQ 8
          + D+P+DQ
Sbjct: 92 WSDRPIDQ 99


>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   FCDKPLD 7
           FC  PLD
Sbjct: 654 FCFSPLD 660


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3201 KPLDDR 3206


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3198 KPLDDR 3203


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3202 KPLDDR 3207


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3202 KPLDDR 3207


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3201 KPLDDR 3206


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3200 KPLDDR 3205


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3200 KPLDDR 3205


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3200 KPLDDR 3205


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3200 KPLDDR 3205


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3159 KPLDDR 3164


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3156 KPLDDR 3161


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3159 KPLDDR 3164


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3159 KPLDDR 3164


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3159 KPLDDR 3164


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3159 KPLDDR 3164


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    KPLDQR 9
            KPLD R
Sbjct: 3159 KPLDDR 3164


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 3  DKPLDQRT 10
          D P +QRT
Sbjct: 86 DAPAEQRT 93


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 3  DKPLDQRT 10
          D P +QRT
Sbjct: 86 DAPAEQRT 93


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 5   PLDQRT 10
           PL+QRT
Sbjct: 991 PLEQRT 996


>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69

Query: 2   CDKPLD 7
           CD PLD
Sbjct: 218 CDVPLD 223


>sp|REV_HV2RO|PROTEIN Rev|Human immunodeficiency virus type 2

Query: 2  CDKPLDQ 8
           D PLDQ
Sbjct: 65 ADSPLDQ 71


>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 2   CDKPLD 7
           C KP+D
Sbjct: 302 CTKPMD 307


>sp|VU84_HHV6Z|PROTEIN U84|Human herpesvirus 6B (strain Z29)

Query: 1   FCDKPL 6
           F DKPL
Sbjct: 115 FTDKPL 120


>sp|VU84_HHV6U|PROTEIN U84|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   FCDKPL 6
           F DKPL
Sbjct: 115 FTDKPL 120


>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P

Query: 2   CDKPLDQR 9
           CDKP + R
Sbjct: 133 CDKPCEFR 140




113|SequenceR|570|561|GQYIIFCDKP

>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2    QYIIFC 7
            QY+IFC
Sbjct: 5852 QYVIFC 5857


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 2   QYIIFCDKP 10
           Q +++CD P
Sbjct: 433 QNLLYCDSP 441


>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)

Query: 1   GQYIIFCDKP 10
           G YI F  KP
Sbjct: 302 GSYIRFATKP 311


>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)

Query: 1   GQYIIFCDKP 10
           G YI F  KP
Sbjct: 302 GSYIRFATKP 311


>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)

Query: 1   GQYIIFCDKP 10
           G YI F  KP
Sbjct: 302 GSYIRFATKP 311


>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   YIIFC 7
           YI+FC
Sbjct: 124 YIVFC 128


>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3   YIIFC 7
           YI+FC
Sbjct: 124 YIVFC 128


>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)

Query: 3   YIIFC 7
           YI+FC
Sbjct: 124 YIVFC 128


>sp|UL33_HHV6U|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 6A (strain

Query: 3   YIIFC 7
           Y+IFC
Sbjct: 212 YVIFC 216


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 3   YIIFCDKP 10
           Y I C++P
Sbjct: 926 YPIICERP 933


>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 2   QYIIFC 7
           QY+ FC
Sbjct: 466 QYLYFC 471


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate

Query: 2   QYIIFC 7
           QY+ FC
Sbjct: 466 QYLYFC 471


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 2   QYIIFC 7
           QY+ FC
Sbjct: 466 QYLYFC 471


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   QYIIFC 7
           QY+ FC
Sbjct: 466 QYLYFC 471


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)

Query: 2   QYIIFC 7
           QY+ FC
Sbjct: 466 QYLYFC 471


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 2   QYIIFC 7
           QY+ FC
Sbjct: 466 QYLYFC 471


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 2   QYIIFC 7
           QY+ FC
Sbjct: 466 QYLYFC 471


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 2   QYIIFC 7
           QY+ FC
Sbjct: 466 QYLYFC 471


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2   QYIIFC 7
           QY+ FC
Sbjct: 458 QYLYFC 463


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 4   IIFCDKP 10
           +++C KP
Sbjct: 964 VLYCHKP 970


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 4   IIFCDKP 10
           +++C KP
Sbjct: 972 VLYCHKP 978


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 4   IIFCDKP 10
           +++C KP
Sbjct: 963 VLYCHKP 969


>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)

Query: 1   GQYIIFCDK 9
           G YII+  K
Sbjct: 117 GSYIIYTKK 125


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 1   GQYIIFCD 8
           G Y++ C+
Sbjct: 746 GSYVVHCN 753


>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P

Query: 6  FCDKP 10
          FC KP
Sbjct: 23 FCQKP 27


>sp|UL38_HCMVM|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  GQYIIFCD 8
          G Y+  CD
Sbjct: 60 GLYVCICD 67


>sp|UL38_HCMVA|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  GQYIIFCD 8
          G Y+  CD
Sbjct: 60 GLYVCICD 67


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 5   IFCDKP 10
           I C+KP
Sbjct: 929 IICEKP 934




114|SequenceR|575|566|VDGHHGQYII

>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 1    VDGHHGQYI 9
            +DG+HGQ++
Sbjct: 1167 MDGYHGQFV 1175


>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)

Query: 4   HHGQYII 10
           HH QYII
Sbjct: 337 HHAQYII 343


>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)

Query: 4   HHGQYII 10
           HH QYII
Sbjct: 337 HHAQYII 343


>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)

Query: 4   HHGQYII 10
           HH QYII
Sbjct: 337 HHAQYII 343


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 2    DGHHGQ 7
            DGHHG+
Sbjct: 1046 DGHHGE 1051


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 2    DGHHGQ 7
            DGHHG+
Sbjct: 1046 DGHHGE 1051


>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   DGHHGQ 7
           DGHHG+
Sbjct: 345 DGHHGR 350


>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)

Query: 2   DGHHGQ 7
           DGHHG+
Sbjct: 476 DGHHGR 481


>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   DGHHGQ 7
           DGHHG+
Sbjct: 414 DGHHGR 419


>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)

Query: 2   DGHHG 6
           DGHHG
Sbjct: 338 DGHHG 342


>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)

Query: 2   DGHHG 6
           DGHHG
Sbjct: 338 DGHHG 342


>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)

Query: 2   DGHHG 6
           DGHHG
Sbjct: 338 DGHHG 342


>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)

Query: 2   DGHHG 6
           DGHHG
Sbjct: 338 DGHHG 342


>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)

Query: 2   DGHHG 6
           DGHHG
Sbjct: 338 DGHHG 342


>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)

Query: 2   DGHHG 6
           DGHHG
Sbjct: 338 DGHHG 342


>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)

Query: 2   DGHHG 6
           DGHHG
Sbjct: 338 DGHHG 342


>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)

Query: 2   DGHHG 6
           DGHHG
Sbjct: 338 DGHHG 342


>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)

Query: 2   DGHHG 6
           DGHHG
Sbjct: 338 DGHHG 342


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 4   HHGQYII 10
           HHG YI+
Sbjct: 416 HHGYYIL 422


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 4   HHGQYII 10
           HHG YI+
Sbjct: 417 HHGYYIL 423


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 4   HHGQYII 10
           HHG YI+
Sbjct: 418 HHGYYIL 424


>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   HHGQYI 9
           HHGQ++
Sbjct: 225 HHGQFM 230


>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   HHGQYI 9
           HHGQ++
Sbjct: 225 HHGQFM 230


>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4    HHGQYII 10
            H+G YII
Sbjct: 1357 HYGHYII 1363


>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4    HHGQYII 10
            H+G YII
Sbjct: 1357 HYGHYII 1363


>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4    HHGQYII 10
            H+G YII
Sbjct: 1357 HYGHYII 1363


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 2   DGHHGQYII 10
           DG+HG+ ++
Sbjct: 600 DGYHGEEVM 608


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 2   DGHHGQYII 10
           DG+HG+ ++
Sbjct: 599 DGYHGEEVM 607


>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 4   HHGQYII 10
           HH QY+I
Sbjct: 353 HHFQYLI 359


>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   HHGQYII 10
           HH QY+I
Sbjct: 353 HHFQYLI 359


>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51

Query: 1   VDGHHG 6
           VDG HG
Sbjct: 144 VDGQHG 149


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 4    HHGQYII 10
            H GQY+I
Sbjct: 1352 HMGQYLI 1358


>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12

Query: 1   VDGHHGQ 7
           V GHHG+
Sbjct: 432 VIGHHGK 438


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 1   VDGHHGQY 8
           +DG  GQY
Sbjct: 353 IDGKVGQY 360


>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9

Query: 3   GHHGQ 7
           GHHG+
Sbjct: 363 GHHGR 367


>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus

Query: 2   DGHHG 6
           +GHHG
Sbjct: 187 NGHHG 191


>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2

Query: 2   DGHHGQY 8
           DG HG++
Sbjct: 286 DGSHGEH 292


>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 1   VDGHHGQYI 9
           VD H  +YI
Sbjct: 191 VDEHEARYI 199


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 3    GHHGQYII 10
             +HG Y++
Sbjct: 2813 AYHGSYVV 2820


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 1    VDGHHG 6
            V GHHG
Sbjct: 1197 VFGHHG 1202


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Dumas)

Query: 1    VDGHHG 6
            V GHHG
Sbjct: 1197 VFGHHG 1202


>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)

Query: 3   GHHGQYII 10
           GH G Y++
Sbjct: 720 GHIGAYVV 727


>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2   DGHHG 6
           DG+HG
Sbjct: 144 DGYHG 148


>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   DGHHG 6
           DG+HG
Sbjct: 144 DGYHG 148


>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   DGHHG 6
           DG+HG
Sbjct: 144 DGYHG 148


>sp|NEC2_HHV6U|NUCLEAR egress protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   VDGHHG 6
           V+GHH 
Sbjct: 95  VEGHHA 100


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 6    GQYII 10
            GQYII
Sbjct: 1700 GQYII 1704


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 4   HHGQYII 10
           +HG YI+
Sbjct: 418 YHGYYIL 424


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 5   HGQYII 10
           HG YI+
Sbjct: 680 HGAYIV 685


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 5   HGQYII 10
           HG YI+
Sbjct: 680 HGAYIV 685


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 1    VDGHHGQYII 10
            +DG+  QY +
Sbjct: 1344 LDGYENQYSV 1353


>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   HHGQYII 10
           ++GQYI+
Sbjct: 355 NNGQYIV 361


>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2   DGHHGQY 8
           DG +G+Y
Sbjct: 463 DGSYGEY 469


>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)

Query: 2   DGHHGQY 8
           DG +G+Y
Sbjct: 463 DGSYGEY 469


>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10

Query: 1   VDGHHGQ 7
           VDG H Q
Sbjct: 245 VDGQHQQ 251


>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)

Query: 2   DGHHG 6
           D HHG
Sbjct: 359 DDHHG 363


>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)

Query: 2   DGHHG 6
           D HHG
Sbjct: 353 DDHHG 357


>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)

Query: 2   DGHHG 6
           D HHG
Sbjct: 353 DDHHG 357


>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)

Query: 2   DGHHG 6
           D HHG
Sbjct: 353 DDHHG 357


>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)

Query: 2   DGHHG 6
           D HHG
Sbjct: 353 DDHHG 357


>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)

Query: 2   DGHHG 6
           D HHG
Sbjct: 353 DDHHG 357


>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)

Query: 2   DGHHG 6
           D HHG
Sbjct: 359 DDHHG 363


>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)

Query: 2   DGHHG 6
           D HHG
Sbjct: 352 DDHHG 356


>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)

Query: 2   DGHHG 6
           D HHG
Sbjct: 352 DDHHG 356


>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)

Query: 2   DGHHG 6
           D HHG
Sbjct: 352 DDHHG 356


>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 2   DGHHG 6
           D HHG
Sbjct: 366 DDHHG 370


>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)

Query: 2   DGHHG 6
           D HHG
Sbjct: 352 DDHHG 356


>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great

Query: 2   DGHHG 6
           D HHG
Sbjct: 353 DDHHG 357


>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)

Query: 2   DGHHG 6
           D HHG
Sbjct: 353 DDHHG 357


>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)

Query: 2   DGHHG 6
           D HHG
Sbjct: 365 DDHHG 369


>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann

Query: 2   DGHHG 6
           D HHG
Sbjct: 366 DDHHG 370


>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain

Query: 4   HHGQYI 9
           HH +YI
Sbjct: 591 HHDRYI 596


>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2   DGHHGQY 8
           DG +G+Y
Sbjct: 463 DGSYGEY 469


>sp|PG036_VACCC|PROTEIN OPG036|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4  HHGQYI 9
          H+G+Y+
Sbjct: 89 HYGEYV 94


>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)

Query: 1  VDGHHG 6
          +DG HG
Sbjct: 54 IDGPHG 59


>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)

Query: 1  VDGHHG 6
          +DG HG
Sbjct: 54 IDGPHG 59


>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)

Query: 1  VDGHHG 6
          +DG HG
Sbjct: 54 IDGPHG 59


>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)

Query: 1  VDGHHG 6
          +DG HG
Sbjct: 54 IDGPHG 59


>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)

Query: 1  VDGHHG 6
          +DG HG
Sbjct: 54 IDGPHG 59


>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)

Query: 1  VDGHHG 6
          +DG HG
Sbjct: 54 IDGPHG 59


>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)

Query: 1  VDGHHG 6
          +DG HG
Sbjct: 54 IDGPHG 59


>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human

Query: 1  VDGHHG 6
          +DG HG
Sbjct: 54 IDGPHG 59




115|SequenceR|580|571|AIPAGVDGHH

>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5

Query: 1  AIPAGVDGH 9
           +PAG  GH
Sbjct: 10 GVPAGFSGH 18


>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2

Query: 1  AIPAGVDGH 9
           +PAG  GH
Sbjct: 10 GVPAGFSGH 18


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   AGVDGH 9
           AGVDGH
Sbjct: 379 AGVDGH 384


>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31

Query: 1 AIPAGVDG 8
         A PAG DG
Sbjct: 2 ADPAGTDG 9


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1942 IPVMLDGH 1949


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1944 IPVMLDGH 1951


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1946 IPVMLDGH 1953


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1941 IPVMLDGH 1948


>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7

Query: 3   PAGVDGH 9
           PAG  GH
Sbjct: 852 PAGTPGH 858


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1944 IPVMLDGH 1951


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1952 IPVMLDGH 1959


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1943 IPVMLDGH 1950


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1942 IPVMLDGH 1949


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1943 IPVMLDGH 1950


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1954 IPVMLDGH 1961


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1962 IPVMLDGH 1969


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1955 IPVMLDGH 1962


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1950 IPVMLDGH 1957


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1952 IPVMLDGH 1959


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1953 IPVMLDGH 1960


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1944 IPVLLDGH 1951


>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4

Query: 3   PAGVDGH 9
           PAG  GH
Sbjct: 923 PAGTPGH 929


>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b

Query: 5   GVDGHH 10
           G+DGH+
Sbjct: 496 GLDGHY 501


>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36

Query: 5   GVDGHH 10
           G+DGH+
Sbjct: 494 GLDGHY 499


>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25

Query: 5   GVDGHH 10
           G+DGH+
Sbjct: 494 GLDGHY 499


>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20

Query: 5   GVDGHH 10
           G+DGH+
Sbjct: 495 GLDGHY 500


>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14

Query: 5   GVDGHH 10
           G+DGH+
Sbjct: 495 GLDGHY 500


>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5

Query: 5   GVDGHH 10
           G+DGH+
Sbjct: 496 GLDGHY 501


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1939 IPCLMDGH 1946


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 2    IPAGVDGH 9
            IP  +DGH
Sbjct: 1940 IPCLMDGH 1947


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 1   AIPAGVD 7
           A+P GVD
Sbjct: 575 AMPQGVD 581


>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67

Query: 4  AGVDGHH 10
          AGV+G H
Sbjct: 19 AGVNGFH 25


>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)

Query: 2   IPAGVDG 8
           +PA VDG
Sbjct: 500 LPAEVDG 506


>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)

Query: 2   IPAGVDG 8
           +PA VDG
Sbjct: 500 LPAEVDG 506


>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)

Query: 2   IPAGVDG 8
           +PA VDG
Sbjct: 500 LPAEVDG 506


>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 2   IPAGVDG 8
           +PA VDG
Sbjct: 500 LPAEVDG 506


>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2   IPAGVDG 8
           +PA VDG
Sbjct: 500 LPAEVDG 506


>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)

Query: 2   IPAGVDG 8
           +PA VDG
Sbjct: 500 LPAEVDG 506


>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7

Query: 5   GVDGH 9
           G+DGH
Sbjct: 494 GLDGH 498


>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47

Query: 5   GVDGH 9
           G+DGH
Sbjct: 495 GLDGH 499


>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24

Query: 5   GVDGH 9
           G+DGH
Sbjct: 497 GLDGH 501


>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21

Query: 5   GVDGH 9
           G+DGH
Sbjct: 493 GLDGH 497


>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19

Query: 5   GVDGH 9
           G+DGH
Sbjct: 494 GLDGH 498


>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12

Query: 5   GVDGH 9
           G+DGH
Sbjct: 494 GLDGH 498


>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8

Query: 5   GVDGH 9
           G+DGH
Sbjct: 493 GLDGH 497


>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1  AIPAGVDGHH 10
          A PA V  HH
Sbjct: 83 AYPAAVLRHH 92


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 3   PAGVDGH 9
           P+G  GH
Sbjct: 928 PSGTPGH 934


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 3   PAGVDGH 9
           P+G  GH
Sbjct: 928 PSGTPGH 934


>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1  AIPAGVDGHH 10
          A PA V  HH
Sbjct: 83 AYPAAVLRHH 92


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 2    IPAGVD 7
            +PAG+D
Sbjct: 1604 VPAGID 1609


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 2    IPAGVD 7
            +PAG+D
Sbjct: 1604 VPAGID 1609


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 2    IPAGVD 7
            +PAG+D
Sbjct: 1604 VPAGID 1609


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 2    IPAGVD 7
            +PAG+D
Sbjct: 1604 VPAGID 1609


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 2    IPAGVD 7
            +PAG+D
Sbjct: 1604 VPAGID 1609


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 2    IPAGVD 7
            +PAG+D
Sbjct: 1604 VPAGID 1609


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 2    IPAGVD 7
            +PAG+D
Sbjct: 1604 VPAGID 1609


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 2    IPAGVD 7
            +PAG+D
Sbjct: 1604 VPAGID 1609


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 2    IPAGVD 7
            +PAG+D
Sbjct: 1604 VPAGID 1609


>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1  AIPAGVDGHH 10
          A PA V  HH
Sbjct: 83 AYPAAVLRHH 92




116|SequenceR|585|576|PLIVDAIPAG

>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 1   PLIVDAIPA 9
           P+++DA+P+
Sbjct: 733 PVVLDALPS 741


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1    PLIVDAIPAG 10
            PLI   +PAG
Sbjct: 1827 PLIQRYLPAG 1836


>sp|US34_HCMVA|PROTEIN US34|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5  DAIPAG 10
          DA+PAG
Sbjct: 94 DALPAG 99




117|SequenceR|590|581|TYAAGPLIVD

>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2    YAAGPLIVD 10
            Y   PLIVD
Sbjct: 6172 YVYNPLIVD 6180


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2    YAAGPLIVD 10
            Y   PLIVD
Sbjct: 6222 YVYNPLIVD 6230


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2    YAAGPLIVD 10
            Y   PLIVD
Sbjct: 6192 YVYNPLIVD 6200


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  IVD
Sbjct: 1341 YSAGERIVD 1349


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  IVD
Sbjct: 1342 YSAGERIVD 1350


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  IVD
Sbjct: 1340 YSAGERIVD 1348


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  IVD
Sbjct: 1341 YSAGERIVD 1349


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  IVD
Sbjct: 1341 YSAGERIVD 1349


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  IVD
Sbjct: 1341 YSAGERIVD 1349


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  IVD
Sbjct: 1353 YSAGERIVD 1361


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  IVD
Sbjct: 1341 YSAGERIVD 1349


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  IVD
Sbjct: 1353 YSAGERIVD 1361


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  IVD
Sbjct: 1353 YSAGERIVD 1361


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  IVD
Sbjct: 1343 YSAGERIVD 1351


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  IVD
Sbjct: 1336 YSAGERIVD 1344


>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44

Query: 1   TYAAGP 6
           +YAAGP
Sbjct: 131 SYAAGP 136


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2    YAAGPLIVD 10
            Y   PLIVD
Sbjct: 6134 YLYNPLIVD 6142


>sp|UL56_HHV11|PROTEIN UL56|Human herpesvirus 1 (strain 17)

Query: 2  YAAGPLI 8
          Y+AGPL+
Sbjct: 52 YSAGPLL 58


>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United

Query: 2   YAAGPL 7
           YA GPL
Sbjct: 813 YATGPL 818


>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain

Query: 1  TYAAGPLI 8
          T+A GP+I
Sbjct: 14 TFAPGPVI 21


>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain

Query: 1  TYAAGPLI 8
          T+A GP+I
Sbjct: 14 TFAPGPVI 21


>sp|POL_HV1Z6|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2  YAAGPLIVD 10
          Y+AG  I+D
Sbjct: 54 YSAGERIID 62


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1342 YSAGERIID 1350


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1336 YSAGERIID 1344


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1334 YSAGERIID 1342


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1339 YSAGERIID 1347


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1338 YSAGERIID 1346


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1338 YSAGERIID 1346


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1338 YSAGERIID 1346


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1336 YSAGERIID 1344


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1346 YSAGERIID 1354


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1340 YSAGERIID 1348


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1345 YSAGERIID 1353


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1345 YSAGERIID 1353


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1341 YSAGERIID 1349


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1341 YSAGERIID 1349


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1336 YSAGERIID 1344


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1337 YSAGERIID 1345


>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y+AG  I+D
Sbjct: 1341 YSAGERIID 1349


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 4    AGPLIVD 10
            +GP++VD
Sbjct: 2371 SGPIVVD 2377


>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain

Query: 1  TYAAGPLI 8
          T+A GP++
Sbjct: 14 TFAPGPVV 21


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y AG  I+D
Sbjct: 1351 YTAGERIID 1359


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    YAAGPLIVD 10
            Y AG  I+D
Sbjct: 1340 YTAGERIID 1348




118|SequenceR|595|586|TASKETYAAG

>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   TASKET 6
           TASKET
Sbjct: 107 TASKET 112




119|SequenceR|600|591|ETNVYTASKE

>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    TNVYTASK 9
            TN+YT S+
Sbjct: 1316 TNIYTGSR 1323


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    TNVYTASK 9
            TN+YT S+
Sbjct: 1316 TNIYTGSR 1323


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    TNVYTASK 9
            TN+YT S+
Sbjct: 1316 TNIYTGSR 1323


>sp|TRX1_HHV6Z|TRIPLEX capsid protein 1|Human herpesvirus 6B (strain Z29)

Query: 1   ETNVYTASKE 10
           + NVY A+KE
Sbjct: 159 QGNVYDANKE 168


>sp|TRX1_HHV6H|TRIPLEX capsid protein 1|Human herpesvirus 6B (HHV-6 variant

Query: 1   ETNVYTASKE 10
           + NVY A+KE
Sbjct: 159 QGNVYDANKE 168


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    TNVYTAS 8
            TN+YT S
Sbjct: 1316 TNIYTGS 1322




120|SequenceR|605|596|QQARGETNVY

>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 2   QARGETN 8
           QARG+TN
Sbjct: 309 QARGQTN 315


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 2   QARGETN 8
           QARG+TN
Sbjct: 309 QARGQTN 315


>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 2   QARGETN 8
           QARG+TN
Sbjct: 309 QARGQTN 315


>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 2   QARGETN 8
           QARG+TN
Sbjct: 309 QARGQTN 315


>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3

Query: 2   QARGETN 8
           QARG+TN
Sbjct: 309 QARGQTN 315


>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2

Query: 2   QARGETN 8
           QARG TN
Sbjct: 322 QARGHTN 328


>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 2   QARGETN 8
           QARG TN
Sbjct: 316 QARGHTN 322


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 2   QARGETN 8
           QARG TN
Sbjct: 322 QARGHTN 328


>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 2   QARGETN 8
           QARG TN
Sbjct: 316 QARGHTN 322


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2   QARGETN 8
           QARG TN
Sbjct: 316 QARGHTN 322


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2   QARGETN 8
           QARG TN
Sbjct: 316 QARGHTN 322


>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3

Query: 2   QARGETN 8
           QARG+TN
Sbjct: 309 QARGQTN 315


>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 2   QARGETN 8
           QARG TN
Sbjct: 316 QARGHTN 322


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2   QARGETN 8
           QARG TN
Sbjct: 316 QARGHTN 322


>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2   QARGETN 8
           QARG TN
Sbjct: 316 QARGHTN 322


>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2   QARGETN 8
           QARG TN
Sbjct: 316 QARGHTN 322


>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2   QARGETN 8
           QARG TN
Sbjct: 316 QARGHTN 322


>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2   QARGETN 8
           QARG TN
Sbjct: 316 QARGHTN 322


>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2

Query: 2   QARGETN 8
           QARG TN
Sbjct: 322 QARGHTN 328


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 4    RGETNV 9
            RGETNV
Sbjct: 2557 RGETNV 2562


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   QARGETNV 9
           +ARGET++
Sbjct: 525 KARGETSI 532


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 2   QARGETNV 9
           +ARGET++
Sbjct: 525 KARGETSI 532


>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)

Query: 3   ARGETNVY 10
           +RGE N Y
Sbjct: 123 SRGEINAY 130


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 4    RGETNV 9
            RGETN+
Sbjct: 2558 RGETNM 2563


>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)

Query: 4   RGETNVY 10
           RGE NV+
Sbjct: 245 RGEKNVH 251


>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)

Query: 4   RGETNVY 10
           RGE NV+
Sbjct: 227 RGEKNVH 233


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 4    RGETNV 9
            RGETN+
Sbjct: 2557 RGETNM 2562


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 4    RGETNV 9
            RGETN+
Sbjct: 2559 RGETNM 2564


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 4    RGETNV 9
            RGETN+
Sbjct: 2559 RGETNM 2564


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 4    RGETNV 9
            RGETN+
Sbjct: 2557 RGETNM 2562


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 4    RGETNV 9
            RGETN+
Sbjct: 2556 RGETNM 2561


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 4    RGETNV 9
            RGETN+
Sbjct: 2557 RGETNM 2562


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 4    RGETNV 9
            RGETN+
Sbjct: 2557 RGETNM 2562


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 1   QQARGETNVY 10
           +  RG+ N+Y
Sbjct: 357 KNQRGDANMY 366


>sp|E4RF5_ADE02|EARLY 4 ORF6/7 control protein|Human adenovirus C serotype 2

Query: 1   QQARGETNVY 10
           + +RGE  VY
Sbjct: 126 KASRGERTVY 135




121|SequenceR|610|601|VAVKTQQARG

>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1    VAVKTQQARG 10
            +   TQQ RG
Sbjct: 1033 ITAYTQQTRG 1042


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1    VAVKTQQARG 10
            +   TQQ RG
Sbjct: 1033 ITAYTQQTRG 1042


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3    VKTQQARG 10
            VKT +A+G
Sbjct: 2450 VKTSKAKG 2457


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3    VKTQQARG 10
            VKT +A+G
Sbjct: 2450 VKTSKAKG 2457




122|SequenceR|615|606|LGPPTVAVKT

>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)

Query: 1   LGPPTVAV 8
           +GPPTV +
Sbjct: 102 IGPPTVTL 109


>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)

Query: 1   LGPPTV 6
           +GPPTV
Sbjct: 102 IGPPTV 107


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1    LGPPTVAV 8
            LGP TVA+
Sbjct: 1199 LGPETVAL 1206


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1    LGPPTVAV 8
            LGP TVA+
Sbjct: 1199 LGPETVAL 1206


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 4  PTVAVKT 10
          P+VAV+T
Sbjct: 24 PSVAVRT 30


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 4  PTVAVKT 10
          P+VAV+T
Sbjct: 24 PSVAVRT 30


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 1    LGPPTVAV 8
            L PPTV +
Sbjct: 1310 LSPPTVTI 1317


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 1    LGPPTVA 7
            + PPTVA
Sbjct: 1351 IAPPTVA 1357


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 1    LGPPTVA 7
            + PPTVA
Sbjct: 1354 ISPPTVA 1360


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 1    LGPPTVA 7
            + PPTVA
Sbjct: 1354 ISPPTVA 1360


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 1    LGPPTVA 7
            L PPT++
Sbjct: 1314 LAPPTIS 1320


>sp|CAP6_ADE41|PRE-PROTEIN VI|Human adenovirus F serotype 41

Query: 1   LGPPTVAVKT 10
           L  PTVAV T
Sbjct: 226 LAAPTVAVAT 235


>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)

Query: 1  LGPPT 5
          LGPPT
Sbjct: 64 LGPPT 68


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1    LGPPTVA 7
            L PPT++
Sbjct: 1314 LAPPTIS 1320


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 1    LGPPTVA 7
            L PPT++
Sbjct: 1310 LAPPTIS 1316


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 3    PPTVA 7
            PPTVA
Sbjct: 1353 PPTVA 1357




123|SequenceR|620|611|WDERALGPPT

>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)

Query: 2  DERALGPP 9
          D  +LGPP
Sbjct: 61 DSDSLGPP 68


>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 1   WDERALG 7
           WD R+LG
Sbjct: 420 WDFRSLG 426


>sp|E1A_ADE02|EARLY E1A protein|Human adenovirus C serotype 2

Query: 2   DERALGP 8
           ++RALGP
Sbjct: 103 EQRALGP 109


>sp|E1A_ADE05|EARLY E1A protein|Human adenovirus C serotype 5

Query: 2   DERALGP 8
           ++RALGP
Sbjct: 103 EQRALGP 109


>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1   WDERALGPP 9
           W+E    PP
Sbjct: 152 WNEHGQAPP 160


>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain 17)

Query: 1   WDERALGPPT 10
           W E ALG P+
Sbjct: 165 WLEGALGAPS 174


>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)

Query: 1   WDERALGPPT 10
           W+ +  G P+
Sbjct: 459 WEHKCAGAPS 468


>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   WDERALGPPT 10
           W+ +  G P+
Sbjct: 459 WEHKCAGAPS 468


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3   ERALGPPT 10
           +RAL PP 
Sbjct: 875 KRALAPPV 882


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3   ERALGPPT 10
           +RAL PP 
Sbjct: 875 KRALAPPV 882


>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2   DERALGP 8
           DER +GP
Sbjct: 576 DERLVGP 582


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2   DERALGP 8
           DER +GP
Sbjct: 576 DERLVGP 582


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 1   WDERALGPPT 10
           W +R LG P 
Sbjct: 650 WAQRLLGEPA 659


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 1   WDERALGPPT 10
           W +R LG P 
Sbjct: 650 WAQRLLGEPA 659


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 1   WDERALGPPT 10
           W +R LG P 
Sbjct: 650 WAQRLLGEPA 659


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 1   WDERALGPPT 10
           W +R LG P 
Sbjct: 650 WAQRLLGEPA 659


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 1   WDERALGPPT 10
           W +R LG P 
Sbjct: 650 WAQRLLGEPA 659


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 1   WDERALGPPT 10
           W +R LG P 
Sbjct: 650 WAQRLLGEPA 659


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 1   WDERALGPPT 10
           W +R LG P 
Sbjct: 650 WAQRLLGEPA 659


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 1   WDERALGPPT 10
           W +R LG P 
Sbjct: 650 WAQRLLGEPA 659


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 1   WDERALGPPT 10
           W +R LG P 
Sbjct: 650 WAQRLLGEPA 659


>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)

Query: 2   DERALG 7
           D+RALG
Sbjct: 132 DDRALG 137


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 1    WDERALGP 8
            +D RA GP
Sbjct: 2377 FDSRARGP 2384




124|SequenceR|625|616|ARIIKWDERA

>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)

Query: 1   ARIIKWDER 9
           +RI++W ER
Sbjct: 596 SRIVEWKER 604


>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)

Query: 2   RIIKWDER 9
           RI++W ER
Sbjct: 596 RIVQWKER 603


>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 1   ARIIKWDER 9
           +RI++W ER
Sbjct: 596 SRIVEWKER 604


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 3   IIKWDERA 10
           +IK DERA
Sbjct: 198 LIKLDERA 205


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 2    RIIKWDERA 10
            +I+KW E A
Sbjct: 1555 KIVKWLEDA 1563


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3    IIKWD 7
            +IKWD
Sbjct: 4634 LIKWD 4638


>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61

Query: 2  RIIKW 6
          RI+KW
Sbjct: 40 RILKW 44


>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57

Query: 2  RIIKW 6
          RI+KW
Sbjct: 42 RILKW 46


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 3   IIKWDERA 10
           +IK DERA
Sbjct: 198 LIKPDERA 205


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 2   RIIKWDE 8
           R++ WD+
Sbjct: 540 RVVLWDD 546




125|SequenceR|630|621|AIESLARIIK

>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)

Query: 2   IESLARI 8
           IESLAR+
Sbjct: 188 IESLARL 194


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 1    AIESLARI 8
            A+ES+AR+
Sbjct: 1115 ALESVARV 1122


>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)

Query: 2   IESLARIIK 10
           +ESLAR ++
Sbjct: 190 VESLARFLE 198




126|SequenceR|635|626|PLTMGAIESL

>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    PLTMGAIESL 10
            P + GA+ES+
Sbjct: 1302 PQSQGAVESM 1311


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    PLTMGAIESL 10
            P + GA+ES+
Sbjct: 1302 PQSQGAVESM 1311


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 1    PLTMGAIESL 10
            P T+GA+E +
Sbjct: 2094 PATIGALEEI 2103


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 1    PLTMGAIESL 10
            P T+GA+E +
Sbjct: 2094 PATIGALEEI 2103


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 1    PLTMGAIESL 10
            P T+GA+E +
Sbjct: 2094 PATIGALEEI 2103


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 1    PLTMGAIESL 10
            P T+GA+E +
Sbjct: 2094 PATIGALEEI 2103


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 1    PLTMGAIESL 10
            P T+GA+E +
Sbjct: 2094 PATIGALEEI 2103


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 1    PLTMGAIESL 10
            P T+GA+E +
Sbjct: 2094 PATIGALEEI 2103


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 1    PLTMGAIESL 10
            P T+GA+E +
Sbjct: 2094 PATIGALEEI 2103


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 1    PLTMGAIESL 10
            P T+GA+E +
Sbjct: 2094 PATIGALEEI 2103


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 1    PLTMGAIESL 10
            P T+GA+E +
Sbjct: 2094 PATIGALEEI 2103




127|SequenceR|640|631|DLTDYPLTMG

>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 2   LTDYPLTMG 10
           +TD PLT+G
Sbjct: 708 ITDTPLTVG 716


>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLTMG
Sbjct: 138 YPLTMG 143


>sp|NEF_HV1S9|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3   TDYPLTMG 10
           T YPLT G
Sbjct: 131 TXYPLTFG 138


>sp|NEF_HV1MP|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT+G
Sbjct: 130 YPLTLG 135


>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3   TDYPLTMG 10
           T YPLT G
Sbjct: 135 TRYPLTFG 142


>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)

Query: 1   DLTDYPLT 8
           +LT+YPL+
Sbjct: 398 NLTEYPLS 405


>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)

Query: 1   DLTDYPLT 8
           +LT+YPL+
Sbjct: 397 NLTEYPLS 404


>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)

Query: 1   DLTDYPLT 8
           +LT+YPL+
Sbjct: 398 NLTEYPLS 405


>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)

Query: 1   DLTDYPLT 8
           +LT+YPL+
Sbjct: 398 NLTEYPLS 405


>sp|NCAP_BUNSH|NUCLEOPROTEIN snowshoe hare

Query: 5   YPLTMG 10
           YPLT+G
Sbjct: 159 YPLTIG 164


>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)

Query: 2   LTDYPLT 8
           +TD+PLT
Sbjct: 187 ITDFPLT 193


>sp|NEF_HV1VI|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT+G
Sbjct: 135 YPLTLG 140


>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse

Query: 5   YPLTMG 10
           YPLT+G
Sbjct: 159 YPLTIG 164


>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 132 YPLTFG 137


>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 147 YPLTFG 152


>sp|NEF_HV1B9|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 136 YPLTFG 141


>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 139 YPLTFG 144


>sp|NEF_HV112|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 135 YPLTFG 140


>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United

Query: 5   YPLTMG 10
           YPLT+G
Sbjct: 159 YPLTIG 164


>sp|NEF_HV1H3|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 135 YPLTFG 140


>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 141 YPLTFG 146


>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 136 YPLTFG 141


>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 135 YPLTFG 140


>sp|NEF_HV1B1|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 135 YPLTFG 140


>sp|NEF_HV1V9|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 136 YPLTFG 141


>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 136 YPLTFG 141


>sp|NEF_HV1LW|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 135 YPLTFG 140


>sp|NEF_HV1H2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 135 YPLTFG 140


>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 135 YPLTFG 140


>sp|NEF_HV1BR|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 135 YPLTFG 140


>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3   TDYPLTMG 10
           T +PLT G
Sbjct: 139 TRFPLTFG 146


>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)

Query: 1   DLTDYPL 7
           +LTD+PL
Sbjct: 843 ELTDHPL 849


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 1    DLTDYPLTMG 10
            +LT  PLT G
Sbjct: 1770 ELTASPLTFG 1779


>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 137 YPLTFG 142


>sp|NEF_HV1U4|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 135 YPLTFG 140


>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 144 YPLTFG 149


>sp|DNLI_VARV|DNA ligase|Variola virus

Query: 1   DLTDYPL 7
           D+TD PL
Sbjct: 326 DMTDIPL 332


>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   DLTDYPL 7
           D+TD PL
Sbjct: 326 DMTDIPL 332


>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)

Query: 1   DLTDYPL 7
           +LTD+PL
Sbjct: 889 ELTDHPL 895


>sp|NEF_HV197|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 135 YPLTFG 140


>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)

Query: 1   DLTDYPL 7
           D+TD PL
Sbjct: 326 DMTDIPL 332


>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 136 YPLTFG 141


>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 5   YPLTMG 10
           YPLT G
Sbjct: 137 YPLTFG 142


>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   DLTDYPL 7
           D+TD PL
Sbjct: 326 DMTDIPL 332


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    DLTDYPLTM 9
            D TDY L +
Sbjct: 4639 DFTDYKLEL 4647


>sp|NEF_HV1Y2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3   TDYPLTMG 10
           T +PLT G
Sbjct: 142 TRWPLTFG 149


>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3   TDYPLTMG 10
           T +PLT G
Sbjct: 134 TRFPLTFG 141


>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)

Query: 1   DLTDYPL 7
           D+TD PL
Sbjct: 328 DMTDIPL 334


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1    DLTDYPLTM 9
            D TDY L +
Sbjct: 4677 DFTDYKLEL 4685


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1    DLTDYPLTM 9
            D TDY L +
Sbjct: 4697 DFTDYKLEL 4705


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1    DLTDYPLTM 9
            D TDY L +
Sbjct: 4727 DFTDYKLEL 4735


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 1   DLTDYPLTMG 10
           D+T +PL  G
Sbjct: 341 DITTWPLLEG 350


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1   DLTDYPLTMG 10
           D+T +PL  G
Sbjct: 341 DITTWPLLEG 350


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1    DLTDYPL 7
            D+T YP+
Sbjct: 1828 DITAYPI 1834


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 1    DLTDYPL 7
            D+T YP+
Sbjct: 1828 DITAYPI 1834




128|SequenceR|645|636|RNRVQDLTDY

>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)

Query: 2    NRVQDLTD 9
            N++Q LTD
Sbjct: 1062 NKIQHLTD 1069


>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   NRVQDLTD 9
           NR +DL D
Sbjct: 134 NRTEDLED 141


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 1    RNRVQDLTD 9
            ++++QDL+D
Sbjct: 1025 KDKLQDLSD 1033


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 1    RNRVQDLTD 9
            ++++QDL+D
Sbjct: 1025 KDKLQDLSD 1033


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 4   VQDLTDY 10
           ++DL DY
Sbjct: 240 IEDLVDY 246


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 3    RVQDLTD 9
            +V+DLTD
Sbjct: 1385 KVEDLTD 1391


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 3    RVQDLTD 9
            +V+DLTD
Sbjct: 1385 KVEDLTD 1391




129|SequenceR|650|641|SVEELRNRVQ

>sp|SF33K_ADE02|PROTEIN 33K|Human adenovirus C serotype 2

Query: 1   SVEELRNRV 9
           S  ELRNR+
Sbjct: 158 STRELRNRI 166


>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)

Query: 2   VEELRNRVQ 10
           VEEL N+VQ
Sbjct: 436 VEELLNKVQ 444


>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)

Query: 2   VEELRNRVQ 10
           VEEL N+VQ
Sbjct: 436 VEELLNKVQ 444


>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann

Query: 2   VEELRNRVQ 10
           VEEL N+VQ
Sbjct: 436 VEELLNKVQ 444


>sp|SF33K_ADE05|PROTEIN 33K|Human adenovirus C serotype 5

Query: 1   SVEELRNRV 9
           S  ELRNR+
Sbjct: 159 STRELRNRI 167


>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain

Query: 2   VEELRNRVQ 10
           + E+R RVQ
Sbjct: 224 IAEMRQRVQ 232


>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 2   VEELRNRVQ 10
           + E+R RVQ
Sbjct: 224 IAEMRQRVQ 232


>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United

Query: 2   VEELRNRVQ 10
           + E+R RVQ
Sbjct: 225 IAEMRQRVQ 233


>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain

Query: 2   VEELRNRVQ 10
           + E+R RVQ
Sbjct: 224 IAEMRQRVQ 232


>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain

Query: 2   VEELRNRVQ 10
           + E+R RVQ
Sbjct: 232 IAEMRQRVQ 240


>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate

Query: 2   VEELRNRVQ 10
           + E+R RVQ
Sbjct: 225 IAEMRQRVQ 233


>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain

Query: 2   VEELRNRVQ 10
           + E+R RVQ
Sbjct: 225 IAEMRQRVQ 233




130|SequenceR|655|646|RVLNPSVEEL

>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 4  NPSVEE 9
          NPSVEE
Sbjct: 26 NPSVEE 31


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 3    LNPSVEE 9
            L+PSVEE
Sbjct: 2256 LDPSVEE 2262


Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1257 VLNPSV 1262


>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1  RVLNPSVEE 9
          RVL PSV E
Sbjct: 59 RVLKPSVIE 67


>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)

Query: 1  RVLNPSVEE 9
          RVL PSV E
Sbjct: 59 RVLKPSVIE 67


>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  RVLNPSVEE 9
          RVL PSV E
Sbjct: 59 RVLKPSVIE 67


>sp|PG091_VARV|PROTEIN OPG091|Variola virus

Query: 3  LNPSVEE 9
          LNPS+E+
Sbjct: 29 LNPSIEK 35


>sp|PG091_VAR67|PROTEIN OPG091|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3  LNPSVEE 9
          LNPS+E+
Sbjct: 29 LNPSIEK 35


>sp|PG091_VACCC|PROTEIN OPG091|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3  LNPSVEE 9
          LNPS+E+
Sbjct: 29 LNPSIEK 35


>sp|PG091_MONPV|PROTEIN OPG091|Monkeypox virus (MPXV)

Query: 3  LNPSVEE 9
          LNPS+E+
Sbjct: 29 LNPSIEK 35


>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)

Query: 1  RVLNPSVEE 9
          RVL PSV E
Sbjct: 59 RVLKPSVIE 67


>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2   VLNPSVEEL 10
           V  PS+EEL
Sbjct: 939 VYKPSIEEL 947


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1251 VLNPSV 1256


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1254 VLNPSV 1259


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1259 VLNPSV 1264


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1257 VLNPSV 1262


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1254 VLNPSV 1259


>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2   VLNPSVEEL 10
           V  PS+EEL
Sbjct: 939 VYKPSIEEL 947


>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2   VLNPSVEEL 10
           V  PS+EEL
Sbjct: 939 VYKPSIEEL 947


>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2   VLNPSVEEL 10
           V  PS+EEL
Sbjct: 939 VYKPSIEEL 947


>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 2   VLNPSVEEL 10
           V  PS+EEL
Sbjct: 939 VYKPSIEEL 947


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1259 VLNPSV 1264


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1253 VLNPSV 1258


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1257 VLNPSV 1262


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1258 VLNPSV 1263


>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2   VLNPSVEEL 10
           V  PS+EEL
Sbjct: 939 VYKPSIEEL 947


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1254 VLNPSV 1259


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1253 VLNPSV 1258


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1253 VLNPSV 1258


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1253 VLNPSV 1258


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1258 VLNPSV 1263


>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2   VLNPSVEEL 10
           V  PS+EEL
Sbjct: 939 VYKPSIEEL 947


>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2   VLNPSVEEL 10
           V  PS+EEL
Sbjct: 939 VYKPSIEEL 947


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1258 VLNPSV 1263


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1257 VLNPSV 1262


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1253 VLNPSV 1258


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1253 VLNPSV 1258


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1253 VLNPSV 1258


>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2   VLNPSVEEL 10
           V  PS+EEL
Sbjct: 939 VYKPSIEEL 947


>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2   VLNPSVEEL 10
           V  PS+EEL
Sbjct: 939 VYRPSIEEL 947


>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate

Query: 2   VLNPSVEEL 10
           V  PS+EEL
Sbjct: 939 VYKPSIEEL 947


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1255 VLNPSV 1260


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1261 VLNPSV 1266


>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 2   VLNPSVEEL 10
           V  PS+EEL
Sbjct: 939 VYKPSIEEL 947


>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2   VLNPSVEEL 10
           V  PS+EEL
Sbjct: 939 VYKPSIEEL 947


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1253 VLNPSV 1258


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1257 VLNPSV 1262


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1257 VLNPSV 1262


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1253 VLNPSV 1258


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1257 VLNPSV 1262


>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2   VLNPSVEEL 10
           V  PS+EEL
Sbjct: 939 VYKPSIEEL 947


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1253 VLNPSV 1258


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1253 VLNPSV 1258


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1257 VLNPSV 1262


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1253 VLNPSV 1258


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    VLNPSV 7
            VLNPSV
Sbjct: 1253 VLNPSV 1258


>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 LNPSVEE 9
         ++PSVEE
Sbjct: 1 MSPSVEE 7


>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 LNPSVEE 9
         ++PSVEE
Sbjct: 1 MSPSVEE 7


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 339 MNPTLEEM 346


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 336 MNPTLEEM 343


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2    VLNPSVEEL 10
            +LNP+ E+L
Sbjct: 3312 MLNPNYEDL 3320


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2    VLNPSVEEL 10
            +LNP+ E+L
Sbjct: 3289 MLNPNYEDL 3297


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    VLNPSVEEL 10
            +LNP+ E+L
Sbjct: 3312 MLNPNYEDL 3320


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    VLNPSVEEL 10
            +LNP+ E+L
Sbjct: 3289 MLNPNYEDL 3297


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 336 MNPTLEEM 343


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 341 MNPTLEEM 348


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 341 MNPTLEEM 348


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 341 MNPTLEEM 348


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 340 MNPTLEEM 347


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 342 MNPTLEEM 349


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 341 MNPTLEEM 348


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 341 MNPTLEEM 348


>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 341 MNPTLEEM 348


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 336 MNPTLEEM 343


>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain

Query: 2   VLNPSVE 8
           +LNPS+E
Sbjct: 183 LLNPSIE 189


>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann

Query: 3   LNPSVEE 9
           +NPSVE+
Sbjct: 203 VNPSVEK 209


>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 336 MNPTLEEM 343


>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 339 MNPTLEEM 346


>sp|VP6_ROTGI|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Rat/United

Query: 1   RVLNPSVEEL 10
           RV+ P+V++L
Sbjct: 111 RVIEPNVKQL 120


>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 341 MNPTLEEM 348


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 341 INPTLEEM 348


>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 336 MNPTLEEM 343


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 4    NPSVEE 9
            NP++EE
Sbjct: 2646 NPTIEE 2651


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 4    NPSVEE 9
            NP++EE
Sbjct: 2645 NPTIEE 2650


>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 336 MNPTLEEM 343


>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 342 MNPTLEEM 349


>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)

Query: 2   VLNPSVEE 9
           VLN SVE+
Sbjct: 250 VLNKSVED 257


>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 340 MNPTLEEM 347


>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 341 MNPTLEEM 348


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 4    NPSVEE 9
            NP++EE
Sbjct: 2646 NPTIEE 2651


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    NPSVEE 9
            NP++EE
Sbjct: 2640 NPTIEE 2645


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    NPSVEE 9
            NP++EE
Sbjct: 2640 NPTIEE 2645


>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 341 MNPTLEEM 348


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    NPSVEE 9
            NP++EE
Sbjct: 2640 NPTIEE 2645


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    NPSVEE 9
            NP++EE
Sbjct: 2640 NPTIEE 2645


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    NPSVEE 9
            NP++EE
Sbjct: 2640 NPTIEE 2645


>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 341 MNPTLEEM 348


>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   LNPSVEEL 10
           +NP++EE+
Sbjct: 341 INPTLEEM 348


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2    VLNPSVE 8
            V+NPSV+
Sbjct: 2460 VVNPSVK 2466


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2    VLNPSVE 8
            V+NPSV+
Sbjct: 2460 VVNPSVK 2466


>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)

Query: 3   LNPSVEE 9
           L+P+VEE
Sbjct: 524 LHPAVEE 530


>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   LNPSVEE 9
           L+P+VEE
Sbjct: 524 LHPAVEE 530




131|SequenceR|660|651|EIDDYRVLNP

>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)

Query: 3   DDYRVLNP 10
           DD++V NP
Sbjct: 304 DDHQVFNP 311


>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   EIDDYRVL 8
           EI+D+RV+
Sbjct: 190 EINDWRVM 197


>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   EIDDYRVL 8
           EI+D+RV+
Sbjct: 190 EINDWRVM 197


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 2   IDDYRVLN 9
           + +YRVLN
Sbjct: 881 VGNYRVLN 888


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1    EIDDYRV 7
            +IDD+R+
Sbjct: 1234 QIDDHRI 1240


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    EIDDYRV 7
            +IDD+R+
Sbjct: 1234 QIDDHRI 1240


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 5    YRVLNP 10
            YR+L+P
Sbjct: 1514 YRILSP 1519


>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D

Query: 5   YRVLNP 10
           YR+L+P
Sbjct: 369 YRILSP 374


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 2   IDDYRVLN 9
           I +YRV+N
Sbjct: 863 IGNYRVVN 870


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 3   DDYRVLNP 10
           DDY + NP
Sbjct: 545 DDYGMSNP 552


>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   IDDYR 6
           +DDYR
Sbjct: 768 VDDYR 772


>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   IDDYR 6
           +DDYR
Sbjct: 768 VDDYR 772


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 2   IDDYRVLN 9
           + +YRV+N
Sbjct: 879 VGNYRVIN 886




132|SequenceR|665|656|FYNAGEIDDY

>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 2    YNAGEID 8
            YN GEID
Sbjct: 1491 YNKGEID 1497


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 2    YNAGEID 8
            YN GEID
Sbjct: 1491 YNKGEID 1497


>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   YNAGEIDD 9
           Y+AGE DD
Sbjct: 132 YSAGEEDD 139


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1    FYNAGEIDDY 10
            FYN+G   DY
Sbjct: 1863 FYNSGIDGDY 1872


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 1    FYNAGEIDDY 10
            FYN+G   DY
Sbjct: 1863 FYNSGIDGDY 1872


>sp|NSS_RVFVZ|NON-STRUCTURAL protein S|Rift valley fever virus (strain

Query: 1  FYNAGE 6
          FYN GE
Sbjct: 59 FYNVGE 64


>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)

Query: 1  FYNAGEIDDY 10
           Y  GE DDY
Sbjct: 87 LYGIGETDDY 96


>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  FYNAGEIDDY 10
           Y  GE DDY
Sbjct: 87 LYGIGETDDY 96


>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)

Query: 1  FYNAGEIDDY 10
           Y  GE DDY
Sbjct: 87 LYGIGETDDY 96


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 2    YNAGEIDD 9
            ++ GE+DD
Sbjct: 1833 FSPGEVDD 1840


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   FYNAGEI 7
           FY  GEI
Sbjct: 313 FYTTGEI 319


>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   FYNAGEI 7
           FY  GEI
Sbjct: 317 FYTTGEI 323


>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P

Query: 1   FYNAGEI 7
           +YN G+I
Sbjct: 187 YYNVGDI 193


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 3    NAGEIDDY 10
            +AG  DDY
Sbjct: 2600 HAGSSDDY 2607


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 3    NAGEIDDY 10
            +AG  DDY
Sbjct: 2512 HAGSSDDY 2519


>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   NAGEIDD 9
           NAG  DD
Sbjct: 391 NAGRYDD 397


>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   NAGEIDD 9
           NAG  DD
Sbjct: 391 NAGRYDD 397


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 1   FYNAGEIDD 9
           FY+A  +DD
Sbjct: 458 FYSANFLDD 466




133|SequenceR|670|661|ENAQQFYNAG

>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 2    NAQQFYNAG 10
            NA+ F+NA 
Sbjct: 2080 NARAFFNAA 2088


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 2    NAQQFYNAG 10
            NA+ F+NA 
Sbjct: 2080 NARAFFNAA 2088


>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   QQFYNA 9
           +QFYNA
Sbjct: 250 RQFYNA 255


>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /

Query: 4   QQFYNA 9
           +QFYNA
Sbjct: 250 RQFYNA 255


>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)

Query: 4   QQFYNA 9
           +QFYNA
Sbjct: 250 RQFYNA 255


>sp|CAPSD_HCYV5|CAPSID protein|Human associated cyclovirus 1 (isolate

Query: 1   ENAQQFYN 8
           ENAQ  YN
Sbjct: 195 ENAQAHYN 202


>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate

Query: 4   QQFYNAG 10
           +QF NAG
Sbjct: 513 RQFVNAG 519


>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain

Query: 4   QQFYNAG 10
           +QF NAG
Sbjct: 513 RQFVNAG 519


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 1   ENAQQFYNAG 10
           E+  QF+N G
Sbjct: 157 ESLVQFFNIG 166


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   ENAQQFYNAG 10
           E+  QF+N G
Sbjct: 480 ESLVQFFNIG 489




134|SequenceR|675|666|VLKSLENAQQ

>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3

Query: 4   SLENAQQ 10
           S+ENAQQ
Sbjct: 415 SVENAQQ 421


>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)

Query: 4   SLENAQQ 10
           S+ENAQQ
Sbjct: 283 SVENAQQ 289


>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 4   SLENAQQ 10
           S+ENAQQ
Sbjct: 415 SVENAQQ 421


>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 4   SLENAQQ 10
           S+ENAQQ
Sbjct: 415 SVENAQQ 421


>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3

Query: 4   SLENAQQ 10
           S+ENAQQ
Sbjct: 415 SVENAQQ 421


>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2

Query: 4   SLENAQQ 10
           S+ENAQQ
Sbjct: 414 SVENAQQ 420


>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 4   SLENAQQ 10
           S+ENAQQ
Sbjct: 415 SVENAQQ 421


>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4

Query: 4   SLENAQQ 10
           S+ENAQQ
Sbjct: 413 SVENAQQ 419


>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 4   SLENAQQ 10
           S+ENAQQ
Sbjct: 415 SVENAQQ 421


>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 4   SLENAQQ 10
           S+ENAQQ
Sbjct: 415 SVENAQQ 421


>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)

Query: 1   VLKSLENAQQ 10
           V  S+E+AQQ
Sbjct: 197 VYGSIESAQQ 206


>sp|A53_VACCC|TRUNCATED secreted TNF-receptor-like protein A53|Vaccinia virus (strain

Query: 4  SLENAQQ 10
          ++ENAQQ
Sbjct: 92 NVENAQQ 98




135|SequenceR|680|671|LLQQNVLKSL

>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   LQQNVLKSL 10
           + +NV+KS+
Sbjct: 108 IHENVIKSM 116


>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)

Query: 2   LQQNVLKSL 10
           + +NV+KS+
Sbjct: 108 IHENVIKSM 116


>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus

Query: 2   LQQNVLKSL 10
           + +NV+KS+
Sbjct: 108 IHENVIKSM 116


>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   LQQNVLKSL 10
           + +NV+KS+
Sbjct: 108 IHENVIKSM 116




136|SequenceR|685|676|VLPDALLQQN

>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 2   LPDALLQQN 10
           L DA+LQ+N
Sbjct: 219 LEDAVLQRN 227


>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 2   LPDALLQQN 10
           L DA+LQ+N
Sbjct: 219 LEDAVLQRN 227


>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 2   LPDALLQQN 10
           L DA+LQ+N
Sbjct: 219 LEDAVLQRN 227


>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2

Query: 1   VLPDALLQQN 10
           V PD ++ QN
Sbjct: 561 VAPDNVIMQN 570


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 1   VLPDALL 7
           +LPDALL
Sbjct: 547 LLPDALL 553


>sp|VE7_HPV49|PROTEIN E7|Human papillomavirus type 49

Query: 2  LPDALLQQ 9
          +PD +LQ+
Sbjct: 8  IPDIILQE 15


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 2   LPDALLQQN 10
           L DA+ Q+N
Sbjct: 427 LQDAICQEN 435




137|SequenceR|690|681|TLQPPVLPDA

>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP VLP+
Sbjct: 839 TIQPIVLPE 847


>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P

Query: 1   TLQPPVLPDA 10
           ++ PP  PDA
Sbjct: 209 SIMPPASPDA 218


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP VLP+
Sbjct: 828 TVQPIVLPE 836


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP VLP+
Sbjct: 833 TVQPIVLPE 841


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP VLP+
Sbjct: 827 TVQPIVLPE 835


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP VLP+
Sbjct: 827 TVQPIVLPE 835


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP VLP+
Sbjct: 839 TVQPIVLPE 847


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP VLP+
Sbjct: 827 TVQPIVLPE 835


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP VLP+
Sbjct: 827 TVQPIVLPE 835


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP VLP+
Sbjct: 831 TVQPIVLPE 839


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    LQPPVLPDA 10
            L+P +LPD 
Sbjct: 1903 LKPVILPDG 1911


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP VLP+
Sbjct: 827 TVQPIVLPE 835


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    LQPPVLPDA 10
            L+P +LPD 
Sbjct: 1903 LKPVILPDG 1911


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP VLP+
Sbjct: 839 TVQPIVLPE 847


>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9

Query: 1  TLQPPVLPD 9
          T Q P+LPD
Sbjct: 32 TEQHPLLPD 40


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 2   LQPPVLP 8
           + PP+LP
Sbjct: 675 VSPPLLP 681


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP  LPD
Sbjct: 832 TVQPIQLPD 840


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP  LPD
Sbjct: 822 TVQPIQLPD 830


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP  LPD
Sbjct: 825 TVQPIQLPD 833


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP  LPD
Sbjct: 822 TVQPIQLPD 830


>sp|VE7_HPV12|PROTEIN E7|Human papillomavirus 12

Query: 2  LQPPVLP 8
          LQP VLP
Sbjct: 18 LQPEVLP 24


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP  LPD
Sbjct: 822 TVQPIQLPD 830


>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP  LPD
Sbjct: 828 TVQPIQLPD 836


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 3    QPPVLPD 9
            +PP LPD
Sbjct: 2705 RPPALPD 2711


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 3    QPPVLPD 9
            QP V+PD
Sbjct: 1691 QPAVIPD 1697


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP +LP+
Sbjct: 829 TVQPIMLPE 837


>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)

Query: 1   TLQPPVLPD 9
           T +PPV+P+
Sbjct: 202 TEEPPVIPE 210


>sp|ORF23_TTVV5|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 3  QPPVLP 8
          QPP LP
Sbjct: 76 QPPALP 81


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   TLQPPVLPD 9
           T+QP +LP+
Sbjct: 826 TVQPIMLPE 834


>sp|VE7_HPV08|PROTEIN E7|Human papillomavirus type 8

Query: 2  LQPPVLP 8
          +QP VLP
Sbjct: 18 IQPEVLP 24


>sp|VE7_HPV47|PROTEIN E7|Human papillomavirus 47

Query: 2  LQPPVLP 8
          +QP VLP
Sbjct: 18 VQPEVLP 24


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 4   PPVLPD 9
           PP+LP+
Sbjct: 509 PPLLPE 514


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 4   PPVLPD 9
           PP+LP+
Sbjct: 509 PPLLPE 514


>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)

Query: 3   QPPVLPD 9
           +PP++P+
Sbjct: 499 EPPLIPE 505


>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1   TLQPPVLPD 9
           T +PPV+P+
Sbjct: 202 TEEPPVIPE 210


>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41

Query: 2  LQPPVLPDA 10
          L P V+PD+
Sbjct: 47 LSPEVVPDS 55


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 4   PPVLPDA 10
           PPV P+A
Sbjct: 395 PPVPPNA 401


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 4   PPVLPDA 10
           PPV P+A
Sbjct: 397 PPVPPNA 403


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 4   PPVLPD 9
           PP+LP+
Sbjct: 509 PPLLPE 514


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 2    LQPPVLP 8
            + PP+LP
Sbjct: 1389 VNPPLLP 1395


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 2    LQPPVLP 8
            + PP+LP
Sbjct: 1389 VNPPLLP 1395


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 2    LQPPVLP 8
            + PP+LP
Sbjct: 1389 VNPPLLP 1395


>sp|CAP6_ADE02|PRE-PROTEIN VI|Human adenovirus C serotype 2

Query: 1   TLQPPVLP 8
           T Q PVLP
Sbjct: 189 TQQKPVLP 196


>sp|CAP6_ADE05|PRE-PROTEIN VI|Human adenovirus C serotype 5

Query: 1   TLQPPVLP 8
           T Q PVLP
Sbjct: 189 TQQKPVLP 196




138|SequenceR|695|686|YFDKITLQPP

>sp|VL2_HPV42|MINOR capsid protein L2|Human papillomavirus 42

Query: 1   YFDKITLQPP 10
           Y D  TLQPP
Sbjct: 166 YIDPFTLQPP 175


>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   KITLQPP 10
           KITL+PP
Sbjct: 141 KITLRPP 147


>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)

Query: 2   FDKITLQPP 10
           FD++ L PP
Sbjct: 271 FDELELDPP 279


>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   FDKITLQPP 10
           FD++ L PP
Sbjct: 271 FDELELDPP 279


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 2   FDKITLQPP 10
           FDK+T+  P
Sbjct: 895 FDKVTIADP 903


>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)

Query: 1   YFDKITLQPP 10
           Y  +I L PP
Sbjct: 442 YLHRIDLGPP 451


>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)

Query: 1   YFDKITLQPP 10
           Y  +I L PP
Sbjct: 442 YLHRIDLGPP 451


>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)

Query: 1   YFDKITLQPP 10
           Y  +I L PP
Sbjct: 442 YLHRIDLGPP 451


>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)

Query: 1   YFDKITLQPP 10
           Y  +I L PP
Sbjct: 442 YLHRIDLGPP 451


>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)

Query: 1   YFDKITLQPP 10
           Y  +I L PP
Sbjct: 442 YLHRIDLGPP 451


>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)

Query: 1   YFDKITLQPP 10
           Y  +I L PP
Sbjct: 442 YLHRIDLGPP 451


>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)

Query: 1   YFDKITLQPP 10
           Y  +I L PP
Sbjct: 442 YLHRIDLGPP 451


>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1   YFDKITLQPP 10
           Y  +I L PP
Sbjct: 442 YLHRIDLGPP 451


>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1   YFDKITLQPP 10
           Y  +I L PP
Sbjct: 442 YLHRIDLGPP 451


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    DKITLQPP 10
            DK+++ PP
Sbjct: 1441 DKLSVSPP 1448


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    DKITLQPP 10
            DK+++ PP
Sbjct: 1441 DKLSVSPP 1448


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    DKITLQPP 10
            DK+++ PP
Sbjct: 1441 DKLSVSPP 1448


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    DKITLQPP 10
            DK+++ PP
Sbjct: 1441 DKLSVSPP 1448


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    DKITLQPP 10
            DK+++ PP
Sbjct: 1441 DKLSVSPP 1448


>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28

Query: 1   YFDKITLQP 9
           YF  + +QP
Sbjct: 96  YFSPVCMQP 104


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 1    YFDKITLQPP 10
            +FD +   PP
Sbjct: 1945 FFDAVASLPP 1954


>sp|TRX2_HHV6U|TRIPLEX capsid protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   DKITLQPP 10
           D +TL PP
Sbjct: 102 DTLTLIPP 109


Query: 1   YFDKITLQ 8
           Y D++TL+
Sbjct: 212 YIDRLTLE 219


>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)

Query: 3   DKITLQPP 10
           D +TL PP
Sbjct: 102 DTLTLIPP 109


Query: 1   YFDKITLQ 8
           Y D++TL+
Sbjct: 212 YIDRLTLE 219


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 1    YFDKITLQ 8
            YF KIT +
Sbjct: 1624 YFPKITFE 1631


>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 1   YFDKITLQP 9
           YF+ + L+P
Sbjct: 248 YFNPVVLRP 256


>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1  YFDKITLQPP 10
          YF+ I   PP
Sbjct: 86 YFNYIARSPP 95


>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 1   YFDKITLQP 9
           YF+ + L+P
Sbjct: 248 YFNPVILRP 256


>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 1   YFDKITLQP 9
           YF+ + L+P
Sbjct: 248 YFNPVILRP 256


>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 1   YFDKITLQP 9
           YF+ + L+P
Sbjct: 248 YFNPVILRP 256


>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 1   YFDKITLQP 9
           YF+ + L+P
Sbjct: 248 YFNPVILRP 256


>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate

Query: 1   YFDKITLQP 9
           YF+ + L+P
Sbjct: 248 YFNPVILRP 256


>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United

Query: 1   YFDKITLQP 9
           YF+ + L+P
Sbjct: 248 YFNPVILRP 256


>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United

Query: 3   DKITLQPP 10
           DK TL+ P
Sbjct: 561 DKTTLETP 568


>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate

Query: 1   YFDKITLQP 9
           YF+ + L+P
Sbjct: 248 YFNPVILRP 256




139|SequenceR|700|691|ISDTMYFDKI

>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 1   ISDTMYFDKI 10
           ISD + FDK+
Sbjct: 285 ISDLLSFDKL 294


>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   ISDTMYFDKI 10
           ISD + FDK+
Sbjct: 285 ISDLLSFDKL 294


>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)

Query: 1   ISDTMYFDK 9
           I DT Y DK
Sbjct: 503 IPDTQYADK 511


>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   ISDTMYFDK 9
           I DT Y DK
Sbjct: 503 IPDTQYADK 511


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 5   MYFDKI 10
           +YFDK+
Sbjct: 971 LYFDKL 976


>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971

Query: 6   YFDKI 10
           YFDK+
Sbjct: 118 YFDKV 122


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 3   DTMYFDK 9
           DT+Y D+
Sbjct: 780 DTLYIDE 786


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 3   DTMYFDK 9
           DT+Y D+
Sbjct: 780 DTLYIDE 786


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 3   DTMYFDK 9
           DT+Y D+
Sbjct: 780 DTLYIDE 786


>sp|YVDD_VACCC|UNCHARACTERIZED 7.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  ISDTMYFDKI 10
          +SD ++FD +
Sbjct: 29 LSDLIFFDPL 38


>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus

Query: 3   DTMYFDKI 10
           DT+YF  +
Sbjct: 360 DTLYFPAV 367




140|SequenceR|705|696|QSARSISDTM

 ***** No hits found ******


141|SequenceR|710|701|CKAMTQSARS

>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1   CKAMTQSAR 9
           CK++TQ A+
Sbjct: 459 CKSITQFAQ 467




142|SequenceR|715|706|TVAKVCKAMT

>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)

Query: 5   VCKAMT 10
           VCKA+T
Sbjct: 455 VCKALT 460


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 1   TVAKVC 6
           T+AK+C
Sbjct: 443 TIAKIC 448


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 1   TVAKVC 6
           T+AK+C
Sbjct: 443 TIAKIC 448


>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)

Query: 5   VCKAMT 10
           +CKA+T
Sbjct: 455 ICKALT 460


>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957

Query: 1  TVAKVCKAM 9
          T+A VC  M
Sbjct: 16 TIATVCSLM 24




143|SequenceR|720|711|AQAGETVAKV

>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1   AQAGETVAKV 10
           AQA ++VAKV
Sbjct: 704 AQAFQSVAKV 713


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1   AQAGETVAKV 10
           AQA ++VAKV
Sbjct: 704 AQAFQSVAKV 713




144|SequenceR|727|716|CISPEEVAQAGE

>sp|NEF_HV190|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 2   ISPEEVAQAGE 12
           ++P+EV QA E
Sbjct: 149 VNPQEVEQANE 159


>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36

Query: 1  CISPEEVAQ 9
          C+SP+ VAQ
Sbjct: 79 CLSPKAVAQ 87


>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   CISPEEVAQA 10
           C+SPE V  A
Sbjct: 274 CLSPEAVLAA 283


>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   CISPEEVAQA 10
           C+SPE V  A
Sbjct: 274 CLSPEAVLAA 283


>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7

Query: 1   CISPEEVA 8
           CI+PE++A
Sbjct: 262 CITPEKMA 269


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 1   CISPEEVA 8
           CI+PE++A
Sbjct: 337 CITPEKMA 344


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 1   CISPEEVA 8
           CI+PE++A
Sbjct: 337 CITPEKMA 344


>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 177 LSPEEVSE 184


>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 177 LSPEEVSE 184


>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 507 LSPEEVSE 514


>sp|UL128_HCMVM|ENVELOPE protein UL128|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  CISPEEVAQ 9
          C SPE+ A+
Sbjct: 64 CYSPEKTAE 72


>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  CISPEEVAQ 9
          C SPE+ A+
Sbjct: 64 CYSPEKTAE 72


>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 505 LSPEEVSE 512


>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4

Query: 1   CISPEEVA 8
           C++PE++A
Sbjct: 332 CVTPEKMA 339


>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 506 LSPEEVSE 513


>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 512 LSPEEVSE 519


>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New

Query: 2   ISPEEVAQ 9
           +SPEEV++
Sbjct: 513 LSPEEVSE 520


>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)

Query: 1   CISPEEVAQA 10
           C+SP E A +
Sbjct: 524 CLSPSEPAAS 533


>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   CISPEEVAQA 10
           C+SP E A +
Sbjct: 524 CLSPSEPAAS 533


>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)

Query: 1   CISPEEVAQA 10
           C+SP E A +
Sbjct: 524 CLSPSEPAAS 533


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 2    ISPEEVA 8
            +SP+EVA
Sbjct: 1979 VSPDEVA 1985


>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1

Query: 1   CISPEE 6
           CI PEE
Sbjct: 294 CIGPEE 299


>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 2   ISPEEVA 8
           I+PEE+A
Sbjct: 550 ITPEEIA 556


>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus

Query: 2  ISPEEVAQAGE 12
          +SP+ V Q G+
Sbjct: 5  VSPQLVLQVGK 15


>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate

Query: 2  ISPEEVAQAGE 12
          +SP+ V Q G+
Sbjct: 5  VSPQLVLQVGK 15


>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)

Query: 2  ISPEEVAQAGE 12
          +SP+ V Q G+
Sbjct: 5  VSPQLVLQVGK 15


>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)

Query: 2  ISPEEVAQAGE 12
          +SP+ V Q G+
Sbjct: 5  VSPQLVLQVGK 15


>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2  ISPEEVAQAGE 12
          +SP+ V Q G+
Sbjct: 5  VSPQLVLQVGK 15


>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)

Query: 2  ISPEEVAQAGE 12
          +SP+ V Q G+
Sbjct: 5  VSPQLVLQVGK 15


>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human

Query: 2   ISPEEVAQ 9
           ISP E+A+
Sbjct: 550 ISPSEIAE 557




THE END