NDUS1_HUMAN Blast Output
Archaea
1|Sequence|1|10|MLRIPVRKAL

>sp|PGP_THEAC|PHOSPHOGLYCOLATE phosphatase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MLRIPVRKA 9
M ++PVRKA
Sbjct: 181 MFQLPVRKA 189


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 IPVRKAL 10
IP+RKAL
Sbjct: 630 IPLRKAL 636


>sp|TRPD_THEKO|ANTHRANILATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 4 IPVRKAL 10
+PVRKAL
Sbjct: 156 MPVRKAL 162


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LRIPVRKAL 10
LR PVRK +
Sbjct: 855 LRYPVRKII 863


>sp|EF1A_NANEQ|ELONGATION factor 1-alpha|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LRIPVRKAL 10
LRIP++ AL
Sbjct: 226 LRIPIQSAL 234


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LRIPVRKAL 10
LR PVRK +
Sbjct: 855 LRYPVRKII 863


>sp|DAPA_ARCFU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 IPVRKAL 10
IPV+KAL
Sbjct: 247 IPVKKAL 253




2|Sequence|6|15|VRKALVGLSK

>sp|NADE_THEVO|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 RKALVGLS 9
RKA++G+S
Sbjct: 22 RKAVIGIS 29




3|Sequence|11|20|VGLSKSPKGC

>sp|Y961_METJA|MCM-LIKE protein MJ0961|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KSPKGC 10
K+PKGC
Sbjct: 93 KNPKGC 98


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VGLSKSPKG 9
V LSK PKG
Sbjct: 533 VKLSKIPKG 541


>sp|MFNA_METTH|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothermobacter

Query: 1 VGLSKSPKGC 10
+GL+ P GC
Sbjct: 209 MGLAPIPSGC 218


>sp|HIS5_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 1 VGLSKSPKG 9
V +SK PKG
Sbjct: 27 VEISKEPKG 35


>sp|MFNA_METMJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoculleus marisnigri

Query: 1 VGLSKSPKGC 10
+G+S P GC
Sbjct: 225 MGMSTIPAGC 234


>sp|HMD_METMP|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 5 KSPKGC 10
K PKGC
Sbjct: 113 KPPKGC 118


>sp|HMD_METM7|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C7 /

Query: 5 KSPKGC 10
K PKGC
Sbjct: 113 KPPKGC 118


>sp|HMD_METM5|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C5 /

Query: 5 KSPKGC 10
K PKGC
Sbjct: 113 KPPKGC 118


>sp|HMD_METTL|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermococcus thermolithotrophicus

Query: 5 KSPKGC 10
K PKGC
Sbjct: 113 KPPKGC 118


>sp|RS12_SULAC|SMALL ribosomal subunit protein uS12|Sulfolobus acidocaldarius (strain

Query: 4 SKSPKGC 10
SKSPKG
Sbjct: 4 SKSPKGL 10




4|Sequence|16|25|SPKGCVRTTA

>sp|TFE_METMA|TRANSCRIPTION factor E|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PKGCVR 7
P+GCVR
Sbjct: 117 PQGCVR 122


>sp|TFE_METBF|TRANSCRIPTION factor E|Methanosarcina barkeri (strain Fusaro /

Query: 2 PKGCVR 7
P+GCVR
Sbjct: 117 PQGCVR 122


>sp|TFE_METAC|TRANSCRIPTION factor E|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PKGCVR 7
P+GCVR
Sbjct: 120 PQGCVR 125


>sp|TFE_METBU|TRANSCRIPTION factor E|Methanococcoides burtonii (strain DSM 6242

Query: 2 PKGCVR 7
P+GCVR
Sbjct: 117 PEGCVR 122


>sp|Y996_METJA|METALLOPROTEASE MJ0996|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GCVRTTA 10
GCVRT A
Sbjct: 442 GCVRTIA 448


>sp|Y412_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 PKGCVRTT 9
P GC +TT
Sbjct: 54 PSGCGKTT 61


>sp|MALK_THELN|TREHALOSE/MALTOSE import ATP-binding protein MalK|Thermococcus litoralis (strain

Query: 2 PKGCVRTT 9
P GC +TT
Sbjct: 37 PSGCGKTT 44


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 2 PKGCVR 7
P GCVR
Sbjct: 469 PNGCVR 474


>sp|RFCL_METJA|REPLICATION factor C large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PKGCVRTT 9
P GC +TT
Sbjct: 47 PPGCGKTT 54


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC

Query: 2 PKGCVRTT 9
P GC +TT
Sbjct: 46 PPGCGKTT 53


>sp|NADK_NATPD|NAD kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SPKGCVRTTA 10
SP+ CV T A
Sbjct: 91 SPEECVETVA 100


>sp|COFC_METM7|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 SPKGCVRT 8
+PK C++T
Sbjct: 138 NPKECIKT 145


>sp|COFC_METMP|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SPKGCVRT 8
+PK C++T
Sbjct: 138 NPKNCMKT 145




5|Sequence|21|30|VRTTATAASN

***** No hits found ******


6|Sequence|26|35|TAASNLIEVF

>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 1 TAASNLIEVF 10
T SNL EVF
Sbjct: 710 TQGSNLREVF 719


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 TAASNLIEVF 10
T NLIE+F
Sbjct: 420 TILPNLIEIF 429




7|Sequence|31|40|LIEVFVDGQS

>sp|HEM1_SULAC|GLUTAMYL-TRNA reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LIEVFVDGQ 9
LIEVF +GQ
Sbjct: 394 LIEVFQNGQ 402


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 1 LIEVFVDG 8
LIE+FVD
Sbjct: 343 LIEIFVDA 350


>sp|LEUC1_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 LIEVFVDG 8
LIE+FVD
Sbjct: 342 LIEIFVDA 349


>sp|Y083_ARCFU|UNCHARACTERIZED protein AF_0083|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IEVFVDGQ 9
IE+FV+G+
Sbjct: 36 IEIFVEGR 43


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 LIEVFVDG 8
LIE++ DG
Sbjct: 879 LIEIYADG 886


>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 IEVFVDGQS 10
++ FVDG+S
Sbjct: 195 LQAFVDGKS 203


>sp|DPCKG_METAR|GTP-DEPENDENT dephospho-CoA kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 IEVFVDGQ 9
+ +FVDG+
Sbjct: 117 VRIFVDGE 124


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 1 LIEVFVDGQ 9
++ +FV+GQ
Sbjct: 467 MLRIFVEGQ 475


>sp|ECFA_METST|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosphaera stadtmanae

Query: 2 IEVFVDGQ 9
IEV VDG+
Sbjct: 210 IEVIVDGK 217




8|Sequence|36|45|VDGQSVMVEP

>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DGQSVMVEP 10
DGQ+VM+EP
Sbjct: 554 DGQTVMIEP 562


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VDGQSVMVEP 10
VDG++V VEP
Sbjct: 832 VDGETVTVEP 841


>sp|Y292_METBF|UPF0179 protein Mbar_A0292|Methanosarcina barkeri (strain Fusaro /

Query: 1 VDGQSVMVEP 10
VDG +M EP
Sbjct: 89 VDGAKIMYEP 98


>sp|PGK2_METJA|2-PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDGQSVMVE 9
V+GQSV++E
Sbjct: 186 VEGQSVIIE 194


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DGQSVMVEP 10
DGQ+V +EP
Sbjct: 498 DGQTVDIEP 506


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 DGQSVMVEP 10
DGQ+V +EP
Sbjct: 498 DGQTVDIEP 506


>sp|RPO3_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum calidifontis (strain DSM

Query: 1 VDGQSVMVE 9
V+GQSV+VE
Sbjct: 132 VEGQSVVVE 140


>sp|DTDA_METBU|D-AMINOACYL-TRNA deacylase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GQSVMVE 9
GQSVM+E
Sbjct: 449 GQSVMIE 455


>sp|Y3685_METAC|UPF0179 protein MA_3685|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VDGQSVMVEP 10
V+G +M EP
Sbjct: 89 VEGAKIMYEP 98


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VDGQSVMVEP 10
VDG+ V EP
Sbjct: 549 VDGEHVTCEP 558


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 VDGQSVMVEP 10
VDG+ V EP
Sbjct: 547 VDGEHVTCEP 556


>sp|Y886_HYPBU|UPF0173 metal-dependent hydrolase Hbut_0886|Hyperthermus butylicus

Query: 1 VDGQSVMVEP 10
+DG +V+++P
Sbjct: 16 IDGYTVLIDP 25


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VDGQSVMVEP 10
VDG+ + +EP
Sbjct: 830 VDGKPIELEP 839


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VDGQSVMVEP 10
+DG+ V EP
Sbjct: 549 IDGEHVTCEP 558


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VDGQSVMVEP 10
V+G++V +EP
Sbjct: 830 VNGEAVKLEP 839


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 VDGQSVMVEP 10
VDG ++ EP
Sbjct: 292 VDGDQLLTEP 301




9|Sequence|41|50|VMVEPGTTVL

>sp|HIS8_SACS2|HISTIDINOL-PHOSPHATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 MVEPGTTVL 10
+VEPG T+L
Sbjct: 119 LVEPGDTIL 127


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VMVEPGTTV 9
+ +EPGTT+
Sbjct: 565 ICIEPGTTI 573


>sp|FLPA_THESM|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus sibiricus (strain

Query: 3 VEPGTTVL 10
++PGTTVL
Sbjct: 70 IKPGTTVL 77


>sp|SPH3_HALVD|SMC-LIKE protein Sph3|Haloferax volcanii (strain ATCC 29605

Query: 1 VMVEPGTTVL 10
V ++PG TVL
Sbjct: 25 VRLDPGVTVL 34


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 MVEPGTTVL 10
+ EPG T+L
Sbjct: 104 LTEPGDTIL 112


>sp|FOLD_METHJ|BIFUNCTIONAL protein FolD|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 MVEPGTTVL 10
MV+PG TV+
Sbjct: 213 MVKPGATVV 221


>sp|PELO_PYRFU|PROTEIN pelota homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VMVEPGTTV 9
+ VEPGT +
Sbjct: 101 LTVEPGTVI 109


>sp|ILVC_METST|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 3 VEPGTTV 9
VEPG T+
Sbjct: 97 VEPGNTI 103


>sp|FLPA_THEKO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus kodakarensis

Query: 3 VEPGTTVL 10
++PG+TVL
Sbjct: 70 IKPGSTVL 77


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 1 VMVEPGTTVL 10
V ++PG TV+
Sbjct: 19 VSLDPGVTVI 28


>sp|Y1914_METTH|UPF0425 pyridoxal phosphate-dependent protein MTH_1914|Methanothermobacter

Query: 2 MVEPGTTVL 10
+ EPG+TV
Sbjct: 94 LTEPGSTVF 102


>sp|GPI_THEON|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus onnurineus (strain NA1)

Query: 1 VMVEPGTTV 9
V +EPGT V
Sbjct: 120 VPMEPGTVV 128


>sp|FLPA_THEGJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus gammatolerans

Query: 3 VEPGTTVL 10
++PG+TVL
Sbjct: 70 IKPGSTVL 77




10|Sequence|46|55|GTTVLQACEK

>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GTTVLQAC 8
GT LQAC
Sbjct: 115 GTAALQAC 122


>sp|HMGCS_METBU|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GTTVLQAC 8
GT +QAC
Sbjct: 116 GTAAMQAC 123


>sp|POK_METHJ|PANTOATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 TVLQACEK 10
TVL AC+K
Sbjct: 232 TVLTACDK 239


>sp|RNZ_PYRAB|RIBONUCLEASE Z|Pyrococcus abyssi (strain GE5 /

Query: 2 TTVLQACE 9
TTV +ACE
Sbjct: 243 TTVEEACE 250


>sp|Y1326_METJA|UNCHARACTERIZED GTP-binding protein MJ1326|Methanocaldococcus jannaschii (strain

Query: 1 GTTVLQACEK 10
G TV CEK
Sbjct: 338 GATVKDVCEK 347


>sp|RNZ_THEON|RIBONUCLEASE Z|Thermococcus onnurineus (strain NA1)

Query: 2 TTVLQACE 9
TTV +ACE
Sbjct: 242 TTVGEACE 249


>sp|RNZ_PYRHO|RIBONUCLEASE Z|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TTVLQACE 9
TT+ +ACE
Sbjct: 243 TTIEEACE 250


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 GTTVLQACE 9
TTV Q CE
Sbjct: 67 ATTVAQVCE 75


>sp|HMGCS_METMA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GTTVLQAC 8
GT +QAC
Sbjct: 116 GTAAVQAC 123


>sp|HMGCS_METAC|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GTTVLQAC 8
GT +QAC
Sbjct: 116 GTAAVQAC 123


>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GTTVLQAC 8
GT +QAC
Sbjct: 116 GTAAVQAC 123


>sp|Y811_METJA|UNCHARACTERIZED protein MJ0811|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GTTVLQACEK 10
GT + CEK
Sbjct: 96 GTATIMFCEK 105




11|Sequence|51|60|QACEKVGMQI

>sp|FOLD_METBF|BIFUNCTIONAL protein FolD|Methanosarcina barkeri (strain Fusaro /

Query: 1 QACEKVGMQ 9
+ACE+VG+Q
Sbjct: 61 RACERVGIQ 69


>sp|PURT_IGNH4|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Ignicoccus hospitalis

Query: 1 QACEKVG 7
+ACEKVG
Sbjct: 144 EACEKVG 150


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 1 QACEKVG 7
+ACEK+G
Sbjct: 147 EACEKIG 153


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 1 QACEKVG 7
+ACEK+G
Sbjct: 147 EACEKIG 153


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 1 QACEKVG 7
+ACEK+G
Sbjct: 147 EACEKIG 153


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 1 QACEKVG 7
+ACEK+G
Sbjct: 147 EACEKIG 153


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 CEKVGMQI 10
CE++GM++
Sbjct: 261 CEQIGMRV 268


>sp|COFE_METMA|COENZYME F420:L-glutamate ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CEKVGMQ 9
CEK+G+Q
Sbjct: 25 CEKIGLQ 31


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QACEKVGMQ 9
+ACE+VG++
Sbjct: 61 RACERVGIR 69


>sp|FOLD_METB6|BIFUNCTIONAL protein FolD|Methanoregula boonei (strain DSM 21154

Query: 1 QACEKVGM 8
+ACE+VG+
Sbjct: 51 RACERVGI 58


>sp|FOLD_METAC|BIFUNCTIONAL protein FolD|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QACEKVGMQ 9
+ACE+VG++
Sbjct: 61 RACERVGIK 69


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 CEKVGMQI 10
CEK+G+ I
Sbjct: 489 CEKLGLHI 496


>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 ACEKVGMQ 9
ACE+VG++
Sbjct: 50 ACERVGIR 57


>sp|FOLD_METMJ|BIFUNCTIONAL protein FolD|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 QACEKVGM 8
+ACE+VG+
Sbjct: 49 RACERVGI 56


>sp|FOLD_METHJ|BIFUNCTIONAL protein FolD|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 QACEKVGM 8
+ACE+VG+
Sbjct: 49 RACEQVGI 56


>sp|MTNA_METJA|PUTATIVE methylthioribose-1-phosphate isomerase|Methanocaldococcus

Query: 1 QACEKVGM 8
+ C+K+GM
Sbjct: 120 ETCKKIGM 127


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 QACEKVGMQI 10
+A EK+GM++
Sbjct: 303 RASEKLGMRV 312


>sp|THYX_AERPE|FLAVIN-DEPENDENT thymidylate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 QACEKVGM 8
+ACE +G+
Sbjct: 113 KACESIGL 120


>sp|FOLD_NITMS|BIFUNCTIONAL protein FolD|Nitrosopumilus maritimus (strain SCM1)

Query: 1 QACEKVGM 8
+ACE+VG+
Sbjct: 55 RACEEVGI 62


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 3 CEKVGMQ 9
CEK+G++
Sbjct: 190 CEKIGIK 196


>sp|PYLD_METAC|PYRROLYSINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CEKVGM 8
CEKVG+
Sbjct: 45 CEKVGI 50


>sp|HIS4_METBF|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina barkeri (strain

Query: 1 QACEKVGMQI 10
AC+K G+QI
Sbjct: 73 SACQKKGVQI 82


>sp|PYRH_METST|URIDYLATE kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 CEKVGMQI 10
C+++G+Q+
Sbjct: 64 CDEIGIQV 71




12|Sequence|56|65|VGMQIPRFCY

>sp|RFRNP_METJA|RNA-FREE ribonuclease P|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GMQIPRFC 9
GMQ RFC
Sbjct: 4 GMQKQRFC 11


>sp|TF2B_METTP|TRANSCRIPTION initiation factor IIB|Methanothrix thermoacetophila (strain DSM

Query: 5 IPRFC 9
IPRFC
Sbjct: 250 IPRFC 254


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 IPRFC 9
IPRFC
Sbjct: 239 IPRFC 243


>sp|TRUD_METTH|PROBABLE tRNA pseudouridine synthase D|Methanothermobacter

Query: 1 VGMQIPRFCY 10
V IPR CY
Sbjct: 392 VEFSIPRGCY 401


>sp|TF2B_METPE|TRANSCRIPTION initiation factor IIB|Methanosphaerula palustris (strain ATCC

Query: 5 IPRFC 9
+PRFC
Sbjct: 247 VPRFC 251


>sp|TF2B_METMZ|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (Methanosarcina frisia)

Query: 5 IPRFC 9
+PRFC
Sbjct: 250 VPRFC 254


>sp|TF2B_METMJ|TRANSCRIPTION initiation factor IIB|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 IPRFC 9
+PRFC
Sbjct: 250 VPRFC 254


>sp|TF2B_METMA|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 IPRFC 9
+PRFC
Sbjct: 250 VPRFC 254


>sp|TF2B_METB6|TRANSCRIPTION initiation factor IIB|Methanoregula boonei (strain DSM 21154

Query: 5 IPRFC 9
+PRFC
Sbjct: 247 VPRFC 251


>sp|TF2B_METAC|TRANSCRIPTION initiation factor IIB|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 IPRFC 9
+PRFC
Sbjct: 250 VPRFC 254


>sp|TF2B7_HALSA|TRANSCRIPTION initiation factor IIB 7|Halobacterium salinarum (strain ATCC 700922

Query: 5 IPRFC 9
+PRFC
Sbjct: 238 VPRFC 242


>sp|TF2B4_HALSA|TRANSCRIPTION initiation factor IIB 4|Halobacterium salinarum (strain ATCC 700922

Query: 5 IPRFC 9
+PRFC
Sbjct: 240 VPRFC 244


>sp|SECY_HALVD|PROTEIN translocase subunit SecY|Haloferax volcanii (strain ATCC 29605

Query: 2 GMQIPRF 8
GMQIP F
Sbjct: 403 GMQIPGF 409


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 1 VGMQIP 6
VGMQ+P
Sbjct: 528 VGMQVP 533


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 VGMQIP 6
VGMQ+P
Sbjct: 528 VGMQVP 533


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 VGMQIP 6
VGMQ+P
Sbjct: 528 VGMQVP 533


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 VGMQIP 6
VGMQ+P
Sbjct: 528 VGMQVP 533


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 VGMQIP 6
VGMQ+P
Sbjct: 528 VGMQVP 533


>sp|SECY_HALMA|PROTEIN translocase subunit SecY|Haloarcula marismortui (strain ATCC 43049

Query: 2 GMQIPRF 8
GMQIP F
Sbjct: 403 GMQIPGF 409


>sp|SECY_HALSA|PROTEIN translocase subunit SecY|Halobacterium salinarum (strain ATCC

Query: 2 GMQIPRF 8
GMQIP F
Sbjct: 404 GMQIPGF 410


>sp|LEU1_METJA|2-ISOPROPYLMALATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGMQIPRFCY 10
VG+ IPR Y
Sbjct: 187 VGVMIPRAMY 196


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 1 VGMQIPRF 8
+GMQIP F
Sbjct: 372 MGMQIPGF 379


>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GMQIPRF 8
GMQ+P F
Sbjct: 406 GMQVPGF 412




13|Sequence|61|70|PRFCYHERLS

>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 PRFCYH 6
PRF YH
Sbjct: 494 PRFTYH 499


>sp|NTPTH_HYPBU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Hyperthermus butylicus (strain DSM 5456

Query: 3 FCYHERLS 10
F HERLS
Sbjct: 132 FVVHERLS 139


>sp|XACJ_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacJ|Haloferax volcanii (strain ATCC

Query: 1 PRFCYHE 7
P CYHE
Sbjct: 219 PFECYHE 225


>sp|RL4_METTH|LARGE ribosomal subunit protein uL4|Methanothermobacter

Query: 1 PRFCYHERLS 10
P+ YHER++
Sbjct: 96 PQKNYHERIN 105




14|Sequence|66|75|HERLSVAGNC

>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 HERLSVAGN 9
HER+ +AG+
Sbjct: 24 HERIHLAGD 32


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina

Query: 2 ERLSVAGN 9
ERL+V GN
Sbjct: 79 ERLAVCGN 86


>sp|TRUA_HALSA|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 1 HERLSVAGN 9
HER VAG+
Sbjct: 254 HERARVAGH 262


>sp|TRUA_HALS3|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC 29341

Query: 1 HERLSVAGN 9
HER VAG+
Sbjct: 254 HERARVAGH 262


>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 2 ERLSVAGNC 10
ERL V G+C
Sbjct: 199 ERLVVDGHC 207


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 2 ERLSVAGNC 10
E LSV G+C
Sbjct: 481 ELLSVGGDC 489


>sp|GSA_METBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 HERLSVAGN 9
HE+L GN
Sbjct: 321 HEKLEATGN 329


>sp|MOAA_METTH|PROBABLE GTP 3',8-cyclase|Methanothermobacter thermautotrophicus (strain

Query: 3 RLSVAGNC 10
RLS+ G C
Sbjct: 15 RLSITGRC 22


>sp|MOAA_METTM|PROBABLE GTP 3',8-cyclase|Methanothermobacter marburgensis (strain ATCC

Query: 3 RLSVAGNC 10
R+SV G C
Sbjct: 15 RISVTGRC 22




15|Sequence|71|80|VAGNCRMCLV

>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 3 GNCRMC 8
GNCR C
Sbjct: 61 GNCRFC 66


>sp|Y1681_METJA|UNCHARACTERIZED protein MJ1681|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NCRMCLV 10
NCR CLV
Sbjct: 298 NCRECLV 304


>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 3 GNCRMCLV 10
GNC C+V
Sbjct: 157 GNCSYCIV 164


>sp|RASEA_METAC|ARCHAEOSINE synthase subunit beta|Methanosarcina acetivorans (strain ATCC

Query: 2 AGNCRMC 8
AG C MC
Sbjct: 56 AGGCTMC 62


>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 3 GNCRMCLV 10
G CR CLV
Sbjct: 94 GICRNCLV 101


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GNCRMCLV 10
G CR CLV
Sbjct: 94 GICRNCLV 101


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 VAGNCRMCLV 10
VAG CR+ +V
Sbjct: 70 VAGECRIPVV 79


>sp|THI4_METMJ|THIAMINE thiazole synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VAGNCRM 7
VAG CRM
Sbjct: 224 VAGECRM 230


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 1 VAGNCRMC 8
++G+CR C
Sbjct: 1301 LSGDCREC 1308


>sp|Y865_METJA|PUTATIVE methylthiotransferase MJ0865|Methanocaldococcus jannaschii (strain

Query: 3 GNCRMCLV 10
GNC C V
Sbjct: 179 GNCTFCQV 186


>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 1 VAGNCRM 7
+AG CRM
Sbjct: 266 IAGACRM 272


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 VAGNCRMCLV 10
V GNC M V
Sbjct: 549 VCGNCGMTAV 558


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 VAGNCRMCLV 10
V GNC M V
Sbjct: 549 VCGNCGMTAV 558




16|Sequence|76|85|RMCLVEIEKA

>sp|RPO3_METST|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosphaera stadtmanae (strain

Query: 1 RMCLVEI 7
R+CLVEI
Sbjct: 30 RICLVEI 36


>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CLVEIEK 9
C+V+IEK
Sbjct: 329 CVVQIEK 335




17|Sequence|81|90|EIEKAPKVVA

>sp|SYR_METVS|ARGININE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EIEKAPKVVA 10
E++KAPK++A
Sbjct: 49 ELKKAPKIIA 58


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 EIEKAPKVVA 10
+++KAPKV+A
Sbjct: 49 DLKKAPKVIA 58


>sp|SCAF_METTL|DUF35 domain-containing scaffold protein|Methanothermococcus

Query: 1 EIEKAPKVVA 10
E+E+ PKV A
Sbjct: 79 ELEEGPKVTA 88


>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 1 EIEKAPKVV 9
EIEKA K+V
Sbjct: 31 EIEKADKIV 39


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 2 IEKAPKVV 9
I+KAPKV+
Sbjct: 248 IQKAPKVL 255


>sp|Y379_THEGJ|UPF0282 protein TGAM_0379|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EIEKAPKVVA 10
E+EK PK A
Sbjct: 258 ELEKRPKTFA 267


>sp|Y1681_THEKO|UPF0282 protein TK1681|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EIEKAPKVVA 10
E+EK PK A
Sbjct: 258 ELEKRPKTFA 267


>sp|NPD1_ARCFU|NAD-DEPENDENT protein deacylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EIEKAPKV 8
E+E APK+
Sbjct: 132 EVESAPKI 139




18|Sequence|86|95|PKVVAACAMP

>sp|SYDND_METJA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKVVAAC 7
PK+VA+C
Sbjct: 168 PKLVASC 174


>sp|KPRS_METJA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KVVAACAMP 10
K++AAC P
Sbjct: 235 KIIAACVHP 243


>sp|RL6_METMP|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 2 KVVAACAMP 10
KVV CA P
Sbjct: 52 KVVIECAFP 60


>sp|HCGF_METKA|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanopyrus kandleri (strain

Query: 3 VVAACAMP 10
VVAAC +P
Sbjct: 45 VVAACFIP 52


>sp|KHSE_HALMA|HOMOSERINE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PKVVAACA 8
P V+AACA
Sbjct: 248 PTVIAACA 255


>sp|FOLD_HALSA|BIFUNCTIONAL protein FolD|Halobacterium salinarum (strain ATCC 700922

Query: 3 VVAACAMP 10
VVAAC +P
Sbjct: 208 VVAACGVP 215


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KVVAACAMP 10
KVVA+C P
Sbjct: 427 KVVASCEKP 435




19|Sequence|91|100|ACAMPVMKGW

>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 2 CAMPVMK 8
CA+PVMK
Sbjct: 356 CALPVMK 362


>sp|SYP_HALLT|PROLINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 AMPVMKG 9
AMPV+KG
Sbjct: 198 AMPVLKG 204


>sp|RL22_PYRHO|LARGE ribosomal subunit protein uL22|Pyrococcus horikoshii (strain ATCC

Query: 5 PVMKGW 10
PV++GW
Sbjct: 123 PVLRGW 128


>sp|RL22_PYRFU|LARGE ribosomal subunit protein uL22|Pyrococcus furiosus (strain ATCC

Query: 5 PVMKGW 10
PV++GW
Sbjct: 123 PVLRGW 128


>sp|RL22_PYRAB|LARGE ribosomal subunit protein uL22|Pyrococcus abyssi (strain GE5 /

Query: 5 PVMKGW 10
PV++GW
Sbjct: 123 PVLRGW 128


>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 MPVMKGW 10
MPV +GW
Sbjct: 281 MPVPRGW 287


>sp|CSD_METTH|PROBABLE cysteine desulfurase|Methanothermobacter thermautotrophicus (strain

Query: 2 CAMPVMK 8
CA+P MK
Sbjct: 356 CAIPAMK 362


>sp|Y3061_HALSA|PUTATIVE sulfur carrier protein

Query: 1 ACAMPVMK 8
+C MPV+K
Sbjct: 17 SCPMPVVK 24


>sp|RL22_METTH|LARGE ribosomal subunit protein uL22|Methanothermobacter

Query: 5 PVMKGW 10
PV++GW
Sbjct: 123 PVIRGW 128


>sp|COXX_ARCFU|PROTOHEME IX farnesyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ACAMPVMKGW 10
A AMP + GW
Sbjct: 140 AGAMPALGGW 149


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 1 ACAMPVMKG 9
+C +P++KG
Sbjct: 410 SCLIPIVKG 418


>sp|COXX1_PICTO|PROTOHEME IX farnesyltransferase 1|Picrophilus torridus (strain ATCC 700027

Query: 3 AMPVMKGW 10
A PV+ GW
Sbjct: 154 AFPVLIGW 161


>sp|Y574_METTH|UNCHARACTERIZED protein MTH_574|Methanothermobacter thermautotrophicus (strain

Query: 1 ACAMPVMK 8
+C MPV++
Sbjct: 34 SCVMPVLR 41




20|Sequence|96|105|VMKGWNILTN

>sp|WECBH_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase homolog|Methanococcus maripaludis (strain DSM 14266

Query: 1 VMKGWNIL 8
V+ GWNIL
Sbjct: 308 VLDGWNIL 315


>sp|HIS2_METMJ|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 MKGWNIL 8
M+ WNIL
Sbjct: 1 MRDWNIL 7


>sp|ILVC_METTP|KETOL-ACID reductoisomerase (NADP(+))|Methanothrix thermoacetophila (strain

Query: 1 VMKGWNILTN 10
+MK WN ++N
Sbjct: 244 LMKMWNSVSN 253


>sp|IF2P_THESM|PROBABLE translation initiation factor IF-2|Thermococcus sibiricus (strain

Query: 2 MKGWNILTN 10
+KGW ++ N
Sbjct: 136 IKGWKVVEN 144


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 MKGWNIL 8
MKG+N+L
Sbjct: 68 MKGYNVL 74


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 MKGWNIL 8
MKG+N+L
Sbjct: 65 MKGYNVL 71


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MKGWNIL 8
MKG+N+L
Sbjct: 64 MKGYNVL 70


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 MKGWNIL 8
MKG+N+L
Sbjct: 67 MKGYNVL 73


>sp|BAX1_SULTO|ENDONUCLEASE Bax1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VMKGWNIL 8
V+KGW I+
Sbjct: 274 VIKGWKII 281


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GWNILTN 10
GW ILT+
Sbjct: 429 GWQILTH 435


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 4 GWNILTN 10
GW ILT+
Sbjct: 429 GWQILTH 435


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 MKGWNIL 8
MKG+N+L
Sbjct: 73 MKGYNVL 79


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 MKGWNIL 8
MKG+N+L
Sbjct: 62 MKGYNVL 68


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 2 MKGWNIL 8
+KGW I+
Sbjct: 523 LKGWRIM 529


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 2 MKGWNIL 8
+KGW I+
Sbjct: 524 LKGWRIM 530


>sp|CMR1A_PYRFU|CRISPR system Cmr subunit Cmr1-1|Pyrococcus furiosus (strain ATCC 43587

Query: 5 WNILTN 10
WN+L+N
Sbjct: 313 WNVLSN 318


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MKGWNIL 8
MKG+N+L
Sbjct: 69 MKGFNVL 75




21|Sequence|101|110|NILTNSEKSK

>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NILTNSEKSK 10
N++ NS+KSK
Sbjct: 880 NVILNSKKSK 889


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NILTNSEKSK 10
N++ NS+KSK
Sbjct: 880 NVILNSKKSK 889


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 NILTNSEKSK 10
N++ NS+KSK
Sbjct: 880 NVILNSKKSK 889


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 NILTNSEKSK 10
N++ NS+KSK
Sbjct: 880 NVILNSKKSK 889


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 NILTNSEKSK 10
N++ NS+KSK
Sbjct: 880 NVILNSKKSK 889


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 NILTNSEKSK 10
N++ NS+KSK
Sbjct: 880 NVILNSKKSK 889


>sp|PORC_PYRFU|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Pyrococcus furiosus (strain

Query: 2 ILTNSEKSK 10
++ N+EKSK
Sbjct: 93 VIVNTEKSK 101


>sp|PORC_THEKO|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Thermococcus kodakarensis

Query: 2 ILTNSEKSK 10
++ N+EKSK
Sbjct: 93 VIVNTEKSK 101


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 ILTNSEK 8
ILTN+EK
Sbjct: 66 ILTNTEK 72




22|Sequence|106|115|SEKSKKAREG

>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain DSM

Query: 1 SEKSKKARE 9
SE +KKARE
Sbjct: 212 SEAAKKARE 220


>sp|KHSE_SACS2|HOMOSERINE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EKSKKARE 9
EK+KKARE
Sbjct: 182 EKTKKARE 189


>sp|KHSE_SACI7|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 EKSKKARE 9
EK+KKARE
Sbjct: 182 EKTKKARE 189


>sp|KHSE_SACI6|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 EKSKKARE 9
EK+KKARE
Sbjct: 182 EKTKKARE 189


>sp|KHSE_SACI4|HOMOSERINE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 EKSKKARE 9
EK+KKARE
Sbjct: 182 EKTKKARE 189


>sp|KHSE_SACI3|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 EKSKKARE 9
EK+KKARE
Sbjct: 182 EKTKKARE 189


>sp|KHSE_SACI2|HOMOSERINE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 EKSKKARE 9
EK+KKARE
Sbjct: 182 EKTKKARE 189


>sp|KHSE_SACI1|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 EKSKKARE 9
EK+KKARE
Sbjct: 182 EKTKKARE 189


>sp|Y1445_METJA|UNCHARACTERIZED protein MJ1445|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KSKKARE 9
K+KKARE
Sbjct: 63 KAKKARE 69


>sp|DNAG_THEKO|DNA primase DnaG|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SEKSKKAREG 10
SEK KK +EG
Sbjct: 13 SEKRKKVKEG 22


>sp|KHSE_SULAC|HOMOSERINE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EKSKKARE 9
+K+KKARE
Sbjct: 177 DKTKKARE 184




23|Sequence|111|120|KAREGVMEFL

>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 1 KAREGVMEFL 10
++R+G++EFL
Sbjct: 443 RSRKGLLEFL 452


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain

Query: 1 KAREGVME 8
+AREGV+E
Sbjct: 65 RAREGVIE 72


>sp|FEN_METTH|FLAP endonuclease 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 EGVMEFL 10
EGV+EFL
Sbjct: 290 EGVIEFL 296


>sp|DNLI_METAR|DNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 AREGVME 8
A+EGVME
Sbjct: 168 AKEGVME 174


>sp|PGP_METS5|PHOSPHOGLYCOLATE phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KAREGVMEFL 10
K+ GVMEF+
Sbjct: 208 KSGAGVMEFI 217


>sp|HJC_SACI5|CROSSOVER junction endodeoxyribonuclease Hjc|Saccharolobus islandicus

Query: 4 EGVMEF 9
EG+MEF
Sbjct: 74 EGIMEF 79


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 3 REGVMEFL 10
+EGV+E+L
Sbjct: 98 KEGVIEYL 105




24|Sequence|116|125|VMEFLLANHP

>sp|PPS_THEKO|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VMEFLLANHP 10
V +FLLA HP
Sbjct: 63 VAKFLLAEHP 72


>sp|AROC_PYRAB|CHORISMATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 VMEFLLANH 9
VM F+LA+H
Sbjct: 336 VMAFVLADH 344


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 VMEFLLANHP 10
V EF+ NHP
Sbjct: 450 VGEFIENNHP 459


>sp|PELO_METAR|PROTEIN pelota homolog|Methanocella arvoryzae (strain DSM 22066

Query: 2 MEFLLANHP 10
++FL NHP
Sbjct: 211 VKFLRVNHP 219


>sp|CMR1_SACS2|CRISPR system CMR subunit Cmr1|Saccharolobus solfataricus (strain ATCC

Query: 1 VMEFLLANH 9
++EFL AN+
Sbjct: 399 ILEFLYANY 407


>sp|DUT_METTH|PROBABLE deoxyuridine 5'-triphosphate

Query: 2 MEFLLANH 9
++FLL NH
Sbjct: 110 LQFLLHNH 117




25|Sequence|121|130|LANHPLDCPI

>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 4 HPLDCPI 10
HP++CP+
Sbjct: 111 HPVNCPV 117


>sp|AROC_METM7|CHORISMATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 LANHPLDCP 9
+ N+PL CP
Sbjct: 187 IENNPLRCP 195


>sp|AROC_METM5|CHORISMATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 LANHPLDCP 9
+ N+PL CP
Sbjct: 187 IENNPLRCP 195


>sp|AROC_META3|CHORISMATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LANHPLDCP 9
+ N+PL CP
Sbjct: 186 IENNPLRCP 194


>sp|AROC_METMP|CHORISMATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 NHPLDCP 9
N+PL CP
Sbjct: 189 NNPLRCP 195


>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 5 PLDCPI 10
P+DCP+
Sbjct: 133 PVDCPV 138


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 5 PLDCPI 10
P+DCP+
Sbjct: 133 PVDCPV 138


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ANHPLDCPI 10
ANH +D PI
Sbjct: 2675 ANHGIDYPI 2683


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 3 NHPLDCP 9
NHP D P
Sbjct: 88 NHPQDVP 94


>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 PLDCPI 10
P DCPI
Sbjct: 294 PKDCPI 299


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ANHPLDC 8
A PLDC
Sbjct: 241 AERPLDC 247


>sp|Y119_METJA|UNCHARACTERIZED protein MJ0119|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PLDCPI 10
PL CPI
Sbjct: 126 PLGCPI 131


>sp|DTDA_PYRCJ|D-AMINOACYL-TRNA deacylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LANHPLDCPI 10
+A P DC I
Sbjct: 109 VAEEPFDCAI 118


>sp|ATGT_HALSA|TRNA-GUANINE(15) transglycosylase|Halobacterium salinarum (strain ATCC 700922

Query: 5 PLDCPI 10
P DCP+
Sbjct: 278 PCDCPV 283


>sp|RSMA_HALWD|PROBABLE ribosomal RNA small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 5 PLDCPI 10
P DCP+
Sbjct: 151 PADCPL 156


>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein MJ0993|Methanocaldococcus

Query: 5 PLDCPI 10
P DCP+
Sbjct: 322 PTDCPL 327


>sp|AROE_SULTO|SHIKIMATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 HPLDCPI 10
H LDC I
Sbjct: 137 HDLDCSI 143




26|Sequence|126|135|LDCPICDQGG

>sp|Y530_METJA|UNCHARACTERIZED ZPR1-like protein MJ0530|Methanocaldococcus jannaschii (strain

Query: 1 LDCPICDQGG 10
LDCP+C G
Sbjct: 7 LDCPVCGGKG 16


>sp|Y2293_ARCFU|UNCHARACTERIZED protein AF_2293|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LDCPICDQG 9
++CPICD G
Sbjct: 3 IECPICDDG 11


>sp|UBAA_HALVD|SAMP-ACTIVATING enzyme E1|Haloferax volcanii (strain ATCC 29605

Query: 2 DCPICDQGG 10
DCP+C +GG
Sbjct: 244 DCPVCGEGG 252


>sp|KPTA_HALMA|PROBABLE RNA 2'-phosphotransferase|Haloarcula marismortui (strain ATCC

Query: 3 CPICDQGG 10
CP+CD G
Sbjct: 19 CPVCDGAG 26


>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 DCPICDQG 9
DCPI D G
Sbjct: 296 DCPILDMG 303


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDCPICDQGG 10
+ CPICD G
Sbjct: 3 VKCPICDGTG 12


Query: 3 CPICDQGG 10
CP+C+ G
Sbjct: 21 CPVCEGTG 28


>sp|RAD50_METTH|DNA double-strand break repair Rad50|Methanothermobacter

Query: 3 CPICDQ 8
CP CDQ
Sbjct: 426 CPTCDQ 431


>sp|GATB_NATPD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Natronomonas pharaonis (strain ATCC

Query: 2 DCPICDQG 9
D PICD G
Sbjct: 106 DAPICDGG 113


>sp|Y1223_PYRHO|UNCHARACTERIZED ZPR1-like protein PH1223|Pyrococcus horikoshii (strain ATCC

Query: 2 DCPICDQGG 10
DCPIC G
Sbjct: 32 DCPICGGKG 40


>sp|TRM1_HALMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloarcula marismortui

Query: 2 DCPICDQ 8
DCP+C++
Sbjct: 253 DCPVCEK 259


>sp|DNLJ_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 CPICD 7
CPICD
Sbjct: 444 CPICD 448


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CPICDQG 9
CP C++G
Sbjct: 40 CPFCEKG 46


>sp|RNP4_THEAC|RIBONUCLEASE P protein component 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LDCPICD 7
+ CP+CD
Sbjct: 76 VKCPVCD 82


>sp|QUEE_HYPBU|7-CARBOXY-7-DEAZAGUANINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LDCPICD 7
L CP CD
Sbjct: 46 LRCPFCD 52


>sp|RIBL_METBF|FAD synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DCPICDQGG 10
+CP+C G
Sbjct: 121 ECPLCSTGA 129


>sp|HYPA_METMA|HYDROGENASE maturation factor HypA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LDCPIC 6
+DCP+C
Sbjct: 103 MDCPVC 108


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LDCPIC 6
L+CPIC
Sbjct: 100 LNCPIC 105


>sp|RIBL_METMA|FAD synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DCPICDQG 9
+CP+C G
Sbjct: 133 ECPLCSTG 140


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC

Query: 1 LDCPICD 7
L CP+CD
Sbjct: 36 LVCPMCD 42


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 LDCPICDQGG 10
L CP+C G
Sbjct: 1153 LRCPVCGNTG 1162


>sp|ATGT_HALSA|TRNA-GUANINE(15) transglycosylase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DCPICDQ 8
DCP+C +
Sbjct: 280 DCPVCAE 286


>sp|KPTA_THEVO|PROBABLE RNA 2'-phosphotransferase|Thermoplasma volcanium (strain ATCC

Query: 2 DCPICDQGG 10
+CP+C + G
Sbjct: 15 ECPVCGKPG 23


>sp|KPTA_THEAC|PROBABLE RNA 2'-phosphotransferase|Thermoplasma acidophilum (strain ATCC

Query: 2 DCPICDQGG 10
+CP+C + G
Sbjct: 15 ECPVCGKPG 23


>sp|RIBL_ARCFU|FAD synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DCPIC 6
DCP+C
Sbjct: 117 DCPLC 121


>sp|Y3024_HALLT|UNCHARACTERIZED protein Hlac_3024|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LDCPICDQG 9
++CP C +G
Sbjct: 23 VECPACGEG 31


>sp|CYAS_METHJ|CYSTEATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LDCPICDQ 8
L CP+C++
Sbjct: 6 LTCPVCNK 13


>sp|RIBL_METAC|FAD synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DCPICDQGG 10
+CP+C G
Sbjct: 133 ECPLCSTGA 141


>sp|TF2B_CALMQ|TRANSCRIPTION initiation factor IIB|Caldivirga maquilingensis (strain ATCC

Query: 1 LDCPIC 6
L CPIC
Sbjct: 43 LRCPIC 48


>sp|HYPA_METAC|HYDROGENASE maturation factor HypA|Methanosarcina acetivorans (strain ATCC

Query: 1 LDCPIC 6
L+CP+C
Sbjct: 103 LECPVC 108


>sp|YTF2_SACSH|TFIIB-TYPE zinc finger protein|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LDCPIC 6
++CP+C
Sbjct: 1 MECPVC 6


>sp|Y890_METJA|UPF0148 protein MJ0890|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CPICDQ 8
CPIC++
Sbjct: 57 CPICEK 62


>sp|AROD_METTP|3-DEHYDROQUINATE dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LDCPIC 6
+DCP+C
Sbjct: 170 VDCPLC 175


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DCPICDQG 9
D PIC G
Sbjct: 105 DAPICSDG 112


>sp|Y078_METHJ|UPF0212 protein Mhun_0078|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LDCPICDQ 8
L CP C++
Sbjct: 49 LSCPYCEE 56


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LDCPIC 6
++CP+C
Sbjct: 437 IECPVC 442


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LDCPIC 6
++CP+C
Sbjct: 437 IECPVC 442


>sp|RL37A_METTH|LARGE ribosomal subunit protein eL43|Methanothermobacter

Query: 3 CPICDQGG 10
CP CD+ G
Sbjct: 38 CPSCDRPG 45


>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CPICDQ 8
CPIC +
Sbjct: 371 CPICQE 376


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 3 CPICD 7
CPIC+
Sbjct: 565 CPICE 569


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 3 CPICD 7
CPIC+
Sbjct: 564 CPICE 568


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DCPIC 6
+CPIC
Sbjct: 546 NCPIC 550


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 2 DCPICDQG 9
D PIC G
Sbjct: 105 DSPICQDG 112


>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 1 LDCPICDQG 9
LDC + DQ
Sbjct: 108 LDCSVVDQA 116


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 CPICDQ 8
CP+C++
Sbjct: 468 CPVCNK 473


>sp|GATB_HALSA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Halobacterium salinarum (strain ATCC

Query: 2 DCPICDQG 9
D PIC G
Sbjct: 104 DAPICQDG 111


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 CPICDQ 8
CPIC +
Sbjct: 461 CPICSK 466


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 CPICDQ 8
CPIC +
Sbjct: 280 CPICSK 285


>sp|KPTA_PYRAE|PROBABLE RNA 2'-phosphotransferase|Pyrobaculum aerophilum (strain ATCC

Query: 3 CPICDQ 8
CP+C Q
Sbjct: 7 CPVCGQ 12


>sp|HMD_METVO|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus voltae

Query: 4 PICDQG 9
P+CD G
Sbjct: 248 PVCDMG 253


>sp|TF2B_IGNH4|TRANSCRIPTION initiation factor IIB|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LDCPIC 6
L CP+C
Sbjct: 9 LRCPVC 14


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LDCPIC 6
L CP+C
Sbjct: 130 LRCPVC 135


>sp|RL37A_METST|LARGE ribosomal subunit protein eL43|Methanosphaera stadtmanae (strain

Query: 3 CPICDQGG 10
CP CD+ G
Sbjct: 38 CPKCDRPG 45


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 CPICDQ 8
CPIC +
Sbjct: 277 CPICSR 282


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 3 CPICDQ 8
CPIC +
Sbjct: 281 CPICTE 286


>sp|TFE_STAMF|TRANSCRIPTION factor E|Staphylothermus marinus (strain ATCC 43588

Query: 1 LDCPIC 6
L CP+C
Sbjct: 99 LKCPLC 104


>sp|TFE_PYRFU|TRANSCRIPTION factor E|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LDCPICDQ 8
CPIC +
Sbjct: 136 FQCPICGE 143


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 2 DCPICDQGG 10
DC IC + G
Sbjct: 629 DCEICMKNG 637


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 3 CPICDQGG 10
CP C++ G
Sbjct: 170 CPACNKPG 177


>sp|Y049_PYRAE|UNCHARACTERIZED serpin-like protein PAE0049|Pyrobaculum aerophilum (strain ATCC

Query: 4 PICDQGG 10
P+C +GG
Sbjct: 327 PVCAKGG 333


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CPICDQ 8
CPIC +
Sbjct: 263 CPICGE 268


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CPICDQ 8
CPIC +
Sbjct: 263 CPICGE 268


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CPICDQ 8
CPIC +
Sbjct: 263 CPICGE 268


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CPICDQ 8
CPIC +
Sbjct: 263 CPICGE 268


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CPICDQ 8
CPIC +
Sbjct: 263 CPICGE 268


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CPICDQ 8
CPIC +
Sbjct: 263 CPICGE 268


>sp|TFE_PYRHO|TRANSCRIPTION factor E|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CPICDQ 8
CPIC +
Sbjct: 136 CPICGE 141


>sp|TFE_PYRAB|TRANSCRIPTION factor E|Pyrococcus abyssi (strain GE5 /

Query: 3 CPICDQ 8
CPIC +
Sbjct: 136 CPICGE 141


>sp|SYP_METKA|PROLINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 CPICDQ 8
CPIC +
Sbjct: 468 CPICGE 473


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 CPICDQ 8
CPIC +
Sbjct: 463 CPICGE 468


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 3 CPICDQ 8
CPIC +
Sbjct: 569 CPICGE 574


>sp|Y1659_METB6|UPF0212 protein Mboo_1659|Methanoregula boonei (strain DSM 21154

Query: 1 LDCPICDQ 8
L CP C++
Sbjct: 49 LACPFCER 56


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 CPICDQ 8
CP CD+
Sbjct: 132 CPSCDR 137


>sp|NRDR_NATPD|TRANSCRIPTIONAL repressor NrdR|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LDCPICDQG 9
++CP C G
Sbjct: 1 MNCPDCGNG 9


>sp|IF2B_THEPD|TRANSLATION initiation factor 2 subunit|Thermofilum pendens (strain DSM 2475

Query: 1 LDCPICD 7
+ CP+C+
Sbjct: 106 VKCPVCE 112


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 3 CPICDQGG 10
CP C+Q G
Sbjct: 669 CPHCNQLG 676


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 2 DCPIC 6
+CP+C
Sbjct: 270 ECPVC 274


>sp|RIBL_METEZ|FAD synthase|Methanohalobium evestigatum (strain ATCC BAA-1072

Query: 2 DCPICDQG 9
DC +C G
Sbjct: 132 DCSLCSSG 139


>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DCPICDQGG 10
+CP CD G
Sbjct: 153 ECPDCDGAG 161


Query: 2 DCPICDQGG 10
+CP CD G
Sbjct: 196 ECPQCDGKG 204


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 DCPIC 6
+CP+C
Sbjct: 388 ECPVC 392


>sp|Y3527_METJA|UNCHARACTERIZED protein MJECL27|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CPICD 7
CP CD
Sbjct: 29 CPFCD 33


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CPICDQGG 10
CP+C G
Sbjct: 201 CPVCGGAG 208


>sp|HMD_METM7|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C7 /

Query: 4 PICDQG 9
P+CD G
Sbjct: 248 PVCDMG 253


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 CPICDQGG 10
CP C+ G
Sbjct: 143 CPYCESEG 150


>sp|RL44E_HALSA|LARGE ribosomal subunit protein eL42|Halobacterium salinarum (strain

Query: 3 CPICDQ 8
CP CD+
Sbjct: 11 CPNCDE 16


>sp|HMD_METVS|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 4 PICDQG 9
P+CD G
Sbjct: 248 PVCDMG 253


>sp|HMD_METM5|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C5 /

Query: 4 PICDQG 9
P+CD G
Sbjct: 248 PVCDMG 253


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 3 CPICDQ 8
CP CD+
Sbjct: 677 CPSCDE 682


>sp|RL37A_METKA|LARGE ribosomal subunit protein eL43|Methanopyrus kandleri (strain AV19

Query: 2 DCPICDQ 8
+CP+C +
Sbjct: 37 ECPVCHK 43


>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 3 CPICDQGG 10
CP+C G
Sbjct: 200 CPVCSGTG 207


>sp|HMD_METMP|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 4 PICDQG 9
P+CD G
Sbjct: 248 PVCDMG 253


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 3 CPICD 7
CP CD
Sbjct: 700 CPACD 704


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 2 DCPIC 6
+CP+C
Sbjct: 424 ECPVC 428


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 CPICD 7
CP+C+
Sbjct: 429 CPVCE 433


>sp|PGP_ARCFU|PHOSPHOGLYCOLATE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DCPICDQGG 10
D IC+ GG
Sbjct: 59 DVVICENGG 67


>sp|HYPA_METBF|HYDROGENASE maturation factor HypA|Methanosarcina barkeri (strain Fusaro /

Query: 1 LDCPIC 6
++CP+C
Sbjct: 103 MECPVC 108


>sp|HMD_METTL|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermococcus thermolithotrophicus

Query: 4 PICDQG 9
P+CD G
Sbjct: 248 PVCDMG 253


>sp|RL37A_SULTO|LARGE ribosomal subunit protein eL43|Sulfurisphaera tokodaii (strain

Query: 3 CPICDQGG 10
CP+C G
Sbjct: 36 CPVCKTTG 43


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LDCPICDQGG 10
L C + D+GG
Sbjct: 241 LACMLADRGG 250


>sp|Y795_PYRHO|UPF0148 protein PH0795|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CPICD 7
CP+C+
Sbjct: 42 CPVCE 46


>sp|Y1270_PYRAB|UPF0148 protein PYRAB12700|Pyrococcus abyssi (strain GE5 /

Query: 3 CPICD 7
CP+C+
Sbjct: 42 CPVCE 46


>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 3 CPICDQ 8
CP CD+
Sbjct: 59 CPDCDE 64


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 3 CPICDQ 8
CP CD+
Sbjct: 59 CPDCDE 64


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 CPICD 7
CP CD
Sbjct: 426 CPACD 430




27|Sequence|131|140|CDQGGECDLQ

>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DQGGECDL 9
D G ECDL
Sbjct: 166 DSGEECDL 173


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DQGGECDL 9
D G ECDL
Sbjct: 63 DDGMECDL 70


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 1 CDQGGECD 8
CD+ G C+
Sbjct: 576 CDEPGRCE 583


>sp|AATE_METVS|A-TYPE ATP synthase subunit E|Methanococcus vannielii (strain ATCC 35089

Query: 4 GGECDLQ 10
GGE DLQ
Sbjct: 119 GGELDLQ 125


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 CDQGGECD 8
CD G C+
Sbjct: 14 CDSNGNCE 21


>sp|CBIZ_HALSA|ADENOSYLCOBINAMIDE amidohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 CDQGGE 6
CD GGE
Sbjct: 170 CDPGGE 175


>sp|RTCA_ARCFU|RNA 3'-terminal phosphate cyclase|Archaeoglobus fulgidus (strain ATCC

Query: 2 DQGGECDLQ 10
+ G EC+L+
Sbjct: 142 EMGAECELE 150


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 CDQGGECDLQ 10
CD G E +L+
Sbjct: 355 CDDGSEAELK 364


>sp|PANB_HALMA|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 4 GGECDLQ 10
GG+CD Q
Sbjct: 203 GGDCDGQ 209




28|Sequence|136|145|ECDLQDQSMM

***** No hits found ******


29|Sequence|141|150|DQSMMFGNDR

>sp|SYR_METVS|ARGININE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 MMFGNDR 10
++FGNDR
Sbjct: 168 VVFGNDR 174




30|Sequence|146|155|FGNDRSRFLE

>sp|CSA2B_SACS2|CRISPR-ASSOCIATED aCascade subunit Cas7/Csa2 2|Saccharolobus solfataricus (strain

Query: 1 FGNDRSRFL 9
FG RSRFL
Sbjct: 234 FGGKRSRFL 242


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GNDRSRFL 9
G DRSR++
Sbjct: 678 GKDRSRYI 685




31|Sequence|151|160|SRFLEGKRAV

>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 FLEGKRA 9
FLEG+RA
Sbjct: 495 FLEGRRA 501


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 FLEGKRA 9
FLEG+RA
Sbjct: 495 FLEGRRA 501


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 FLEGKRA 9
FLEG+RA
Sbjct: 495 FLEGRRA 501


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain ATCC

Query: 3 FLEGKRA 9
F EGKRA
Sbjct: 252 FFEGKRA 258


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 RFLEGKRAV 10
RFLEG ++V
Sbjct: 505 RFLEGYKSV 513


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 3 FLEGKRA 9
F+EG+RA
Sbjct: 496 FIEGRRA 502


>sp|GLPR_HALVD|HTH-TYPE transcriptional regulator GlpR|Haloferax volcanii (strain ATCC

Query: 4 LEGKRAV 10
LEGKRA+
Sbjct: 76 LEGKRAI 82


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 3 FLEGKRA 9
F+EG+RA
Sbjct: 491 FIEGRRA 497


>sp|ALBA_METPE|DNA/RNA-BINDING protein Alba|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 SRFLEGKR 8
+RFLEG R
Sbjct: 53 NRFLEGVR 60


>sp|SRP54_STAMF|SIGNAL recognition particle 54 kDa|Staphylothermus marinus (strain ATCC

Query: 1 SRFLEGK 7
SRFL GK
Sbjct: 11 SRFLSGK 17




32|Sequence|156|165|GKRAVEDKNI

>sp|Y675_METJA|UNCHARACTERIZED protein MJ0675|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKRAVED 7
GKRAVED
Sbjct: 36 GKRAVED 42


>sp|Y523_ARCFU|UNCHARACTERIZED protein AF_0523|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKRAVED 7
G RAVED
Sbjct: 124 GSRAVED 130


>sp|PELO_ARCFU|PROTEIN pelota homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KRAVEDKN 9
+RAVED N
Sbjct: 120 RRAVEDSN 127


>sp|ACDE_METKA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanopyrus

Query: 1 GKRAVEDK 8
G RAVED+
Sbjct: 38 GPRAVEDE 45


>sp|HPRT_METRM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanobrevibacter ruminantium (strain

Query: 1 GKRAVEDKN 9
GK+ VEDK
Sbjct: 157 GKKIVEDKT 165


>sp|FEN_METAR|FLAP endonuclease 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 GKRAVEDKNI 10
GKR V KNI
Sbjct: 191 GKRKVPRKNI 200


>sp|MCRY_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 2 KRAVEDKNI 10
+RA+EDK I
Sbjct: 273 ERAIEDKVI 281


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GKRAVED 7
GKR VED
Sbjct: 162 GKRTVED 168


>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GKRAVEDKNI 10
GK+ EDK I
Sbjct: 391 GKKEYEDKTI 400


>sp|CHEB_METBU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcoides

Query: 1 GKRAVEDKN 9
GK AVE+ N
Sbjct: 36 GKEAVENTN 44


>sp|RFCS_SULTO|REPLICATION factor C small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KRAVEDKNI 10
KR V+DKN+
Sbjct: 32 KRFVKDKNM 40




33|Sequence|161|170|EDKNIGPLVK

>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 1 EDKNIGPL 8
EDK IGPL
Sbjct: 417 EDKFIGPL 424


>sp|Y1398_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1398|Methanocaldococcus

Query: 2 DKNIGPLVK 10
D++I PL+K
Sbjct: 74 DRDIAPLIK 82


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EDKNIGPLVK 10
E KNIG L+K
Sbjct: 43 EYKNIGDLIK 52


>sp|AATF_METAC|A-TYPE ATP synthase subunit F|Methanosarcina acetivorans (strain ATCC

Query: 1 EDKNIGPLV 9
EDK+IG LV
Sbjct: 41 EDKSIGILV 49


>sp|WTPC_PYRFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus furiosus (strain ATCC

Query: 3 KNIGPLVK 10
+++GPLVK
Sbjct: 295 EDVGPLVK 302




34|Sequence|166|175|GPLVKTIMTR

>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GPLVKTIMTR 10
G L+KT+M +
Sbjct: 865 GTLIKTLMAK 874


>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 GPLVKTIMTR 10
G LVK +MT+
Sbjct: 149 GKLVKELMTK 158


>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GPLVKTIMTR 10
G LVK +MT+
Sbjct: 149 GKLVKELMTK 158




35|Sequence|171|180|TIMTRCIQCT

>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 5 RCIQCT 10
RCIQCT
Sbjct: 51 RCIQCT 56


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 4 TRCIQC 9
TRC++C
Sbjct: 1062 TRCVKC 1067


>sp|THRC_METJA|THREONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IMTRCIQC 9
++ RCI+C
Sbjct: 1 MLQRCIKC 8


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC

Query: 5 RCIQC 9
RC+QC
Sbjct: 41 RCLQC 45


>sp|HDRC1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit C|Methanosarcina acetivorans

Query: 3 MTRCIQC 9
+ RCIQC
Sbjct: 38 LDRCIQC 44


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 4 TRCIQC 9
TRC+ C
Sbjct: 1115 TRCLDC 1120


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 4 TRCIQC 9
TRC+ C
Sbjct: 2206 TRCLDC 2211


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 4 TRCIQC 9
TRC+ C
Sbjct: 1287 TRCLDC 1292


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 3 MTRCIQC 9
M CIQC
Sbjct: 293 MEHCIQC 299


>sp|RIFK_METLZ|RIBOFLAVIN kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 TRCIQCT 10
RCI+CT
Sbjct: 170 ARCIKCT 176




36|Sequence|176|185|CIQCTRCIRF

>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IQCTRCIRF 10
+QC RC RF
Sbjct: 151 VQCPRCSRF 159


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 1 CIQCTRCI 8
CI C RC+
Sbjct: 369 CIHCARCV 376


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 1 CIQCTRCIR 9
C+ C +C++
Sbjct: 480 CVYCKKCVK 488


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 1 CIQCTRC 7
CI C RC
Sbjct: 451 CIACGRC 457


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus fulgidus

Query: 1 CIQCTRCI 8
C++C CI
Sbjct: 286 CVRCMHCI 293


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 CIQCTRC 7
CI C RC
Sbjct: 455 CIGCRRC 461


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 CIQCTRCI 8
C QC C+
Sbjct: 405 CTQCMNCV 412


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 CIQCTRC 7
CI C RC
Sbjct: 455 CIGCRRC 461


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 CIQCTRC 7
CI C RC
Sbjct: 454 CIGCRRC 460


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 CIQCTRC 7
CI C RC
Sbjct: 454 CIGCRRC 460


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 CIQCTRC 7
CI C RC
Sbjct: 443 CIACGRC 449


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 CIQCTRC 7
CI C RC
Sbjct: 455 CIGCRRC 461


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 CIQCTRC 7
CI C RC
Sbjct: 455 CIGCRRC 461


>sp|ISF1_METJA|IRON-SULFUR flavoprotein MJ0731|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CIQCTRCIR 9
C+ C CI+
Sbjct: 46 CLHCDYCIK 54


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 1 CIQCTRC 7
CI C RC
Sbjct: 455 CIGCRRC 461


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 IQCTRC 7
++CTRC
Sbjct: 122 VKCTRC 127


>sp|KPTA_METBF|PROBABLE RNA 2'-phosphotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CIQCTRCIRF 10
C+QC R R+
Sbjct: 16 CLQCKRPGRY 25


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 CIQCTRCIR 9
C QC++ +R
Sbjct: 3 CYQCSQTVR 11


>sp|RPO3_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfolobus acidocaldarius (strain ATCC

Query: 1 CIQCTRCIRF 10
CI C C+++
Sbjct: 203 CILCEECLKY 212


>sp|QUEC1_SULTO|7-CYANO-7-DEAZAGUANINE synthase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 CIQCTRCIR 9
C QC++C++
Sbjct: 174 CGQCSQCLK 182


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 CTRCIRF 10
C RC RF
Sbjct: 130 CPRCERF 136


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 CIQCTR 6
C+QC R
Sbjct: 581 CVQCKR 586


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 CTRCIRF 10
CT C RF
Sbjct: 128 CTTCSRF 134


>sp|HDRD_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina barkeri

Query: 1 CIQCTRCIRF 10
C++C C+++
Sbjct: 24 CVRCGECVKW 33


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 2 IQCTRCIR 9
++CT+C R
Sbjct: 1010 VRCTKCNR 1017


>sp|HDLC_ARCPA|HETERODISULFIDE reductase subunit C-like protein|Archaeoglobus profundus (strain

Query: 1 CIQCTRC 7
C+ C RC
Sbjct: 89 CVACNRC 95


>sp|HDRD_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina thermophila

Query: 1 CIQCTRCIRF 10
C++C C+++
Sbjct: 24 CVRCGECVKW 33


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 1 CIQCT 5
CIQCT
Sbjct: 52 CIQCT 56


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CIQCTRCI 8
CI+C +C+
Sbjct: 76 CIRCGKCL 83


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 1 CIQCTRCIR 9
CI+C C R
Sbjct: 24 CIRCRVCER 32


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 1 CIQCTRCI 8
CI+C CI
Sbjct: 136 CIECFSCI 143


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 1 CIQCTRCIR 9
C C RC R
Sbjct: 248 CTACGRCSR 256


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 1 CIQCTRCI 8
CI C CI
Sbjct: 137 CIDCLSCI 144


>sp|ASSTI_METAC|L-ASPARTATE semialdehyde sulfurtransferase iron-sulfur subunit|Methanosarcina

Query: 1 CIQCTRCIR 9
CIQC CI+
Sbjct: 111 CIQCGMCIK 119




37|Sequence|181|190|RCIRFASEIA

>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RCIRFASEIA 10
RC R A E+A
Sbjct: 611 RCARVADEVA 620


>sp|Y078_METJA|UNCHARACTERIZED protein MJ0078|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CIRFAS 7
CIRFAS
Sbjct: 108 CIRFAS 113


>sp|RSMA_METHJ|PROBABLE ribosomal RNA small subunit|Methanospirillum hungatei JF-1

Query: 4 RFASEIA 10
RFASEIA
Sbjct: 67 RFASEIA 73


>sp|Y123_ARCFU|UNCHARACTERIZED protein AF_0123|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CIRFASEI 9
CIRFA I
Sbjct: 9 CIRFAKVI 16




38|Sequence|186|195|ASEIAGVDDL

>sp|GUAAB_METVS|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 2 SEIAGVDD 9
SE+AG+DD
Sbjct: 90 SELAGIDD 97


>sp|PPAC_ARCFU|PROBABLE manganese-dependent inorganic pyrophosphatase|Archaeoglobus

Query: 2 SEIAGVDDL 10
++IAG+DDL
Sbjct: 181 AKIAGIDDL 189


>sp|CFBE_METAC|COENZYME F(430) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ASEIAGVDDL 10
ASE+AG +D+
Sbjct: 454 ASELAGTEDI 463


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 2 SEIAGVDD 9
SEI G+DD
Sbjct: 89 SEIEGIDD 96


>sp|CFBE_METBF|COENZYME F(430) synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ASEIAGVDDL 10
ASE AG DD+
Sbjct: 510 ASEFAGGDDI 519


>sp|PARP_SACSO|NAD(+) ADP-ribosyltransferase|Saccharolobus solfataricus (Sulfolobus

Query: 1 ASEIAGVDD 9
AS +AG+DD
Sbjct: 112 ASTLAGLDD 120


>sp|QUEC_METTH|7-CYANO-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ASEIAGVDD 9
A E+AG+DD
Sbjct: 208 AFELAGIDD 216


>sp|Y1638_PYRFU|MEMO1 family protein PF1638|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SEIAGVDDL 10
SEIA +DDL
Sbjct: 114 SEIADLDDL 122


>sp|NTPTH_SULTO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SEIAGVDDL 10
SEI G+D++
Sbjct: 98 SEIIGIDEI 106


>sp|RS5_HALSA|SMALL ribosomal subunit protein uS5|Halobacterium salinarum (strain ATCC

Query: 3 EIAGVDDL 10
E+AG+DD+
Sbjct: 163 ELAGIDDV 170


>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SEIAGVD 8
SEIAG+D
Sbjct: 88 SEIAGMD 94




39|Sequence|191|200|GVDDLGTTGR

>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GVDDLGTTGR 10
GVDDLG T R
Sbjct: 415 GVDDLGGTMR 424


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 VDDLGTTGR 10
V+D+GT GR
Sbjct: 222 VEDIGTAGR 230


>sp|GFCR_ARCFU|TRANSCRIPTIONAL regulator GfcR|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VDDLGTTGR 10
VDD+ +TGR
Sbjct: 142 VDDITSTGR 150


>sp|PYRE_STAMF|OROTATE phosphoribosyltransferase|Staphylothermus marinus (strain ATCC

Query: 2 VDDLGTTG 9
VDD+ TTG
Sbjct: 118 VDDVATTG 125


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 VDDLGTTGR 10
V+DL T+GR
Sbjct: 217 VEDLSTSGR 225


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VDDLGTTGR 10
VD++G TGR
Sbjct: 124 VDNVGRTGR 132


>sp|KCY_METB6|CYTIDYLATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 GVDDLG 6
GVDDLG
Sbjct: 159 GVDDLG 164


>sp|PYRC_HALSA|DIHYDROOROTASE salinarum (strain ATCC 700922

Query: 2 VDDLGTTGR 10
+DDLGT GR
Sbjct: 254 LDDLGTFGR 262


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 VDDLGTTGR 10
VD++G TGR
Sbjct: 124 VDNVGRTGR 132


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VDDLGTTGR 10
VD++G TGR
Sbjct: 127 VDNVGRTGR 135


>sp|HIS1_METJA|ATP phosphoribosyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 GVDDLGTTG 9
GV D+G TG
Sbjct: 60 GVADIGVTG 68


>sp|DNAG_PYRHO|DNA primase DnaG|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GVDDLGTT 8
G DD GTT
Sbjct: 29 GKDDFGTT 36


>sp|CAS2_METAC|CRISPR-ASSOCIATED endoribonuclease Cas2|Methanosarcina acetivorans (strain ATCC

Query: 1 GVDDLGT 7
G++DLGT
Sbjct: 72 GIEDLGT 78


>sp|PYRE_SACS2|OROTATE phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 VDDLGTTG 9
VDD+ TTG
Sbjct: 110 VDDVATTG 117


>sp|HIS1_METMP|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 GVDDLGTTG 9
GV D+G TG
Sbjct: 60 GVADVGVTG 68


>sp|DNAG_PYRAB|DNA primase DnaG|Pyrococcus abyssi (strain GE5 /

Query: 1 GVDDLGTT 8
G DD GTT
Sbjct: 29 GKDDFGTT 36


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 GVDDLGTTGR 10
G+ LGT+GR
Sbjct: 653 GIRLLGTSGR 662


>sp|PYRE_HYPBU|OROTATE phosphoribosyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 VDDLGTTG 9
VDD+ TTG
Sbjct: 117 VDDVATTG 124


>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VDDLGTTGR 10
VDD+ T GR
Sbjct: 799 VDDISTVGR 807


>sp|PURA_HALMA|ADENYLOSUCCINATE synthetase|Haloarcula marismortui (strain ATCC 43049

Query: 3 DDLGTTGR 10
D++GTTGR
Sbjct: 122 DEVGTTGR 129


>sp|PYRG_METLZ|CTP synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GVDDLGTTGR 10
GV+DLG T R
Sbjct: 417 GVEDLGGTMR 426


>sp|HIS1_METM7|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 GVDDLGTTG 9
GV D+G TG
Sbjct: 60 GVADVGVTG 68


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVDDLGTTGR 10
DDLG+T R
Sbjct: 317 ACDDLGSTAR 326


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GVDDLGTTGR 10
G+D G TGR
Sbjct: 94 GIDMAGQTGR 103


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GVDDLGTTGR 10
G+D G TGR
Sbjct: 94 GIDMAGQTGR 103


>sp|PYRE_SULAC|OROTATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 VDDLGTTG 9
VDD+ TTG
Sbjct: 111 VDDVATTG 118


>sp|HIS1_METM6|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 GVDDLGTTG 9
GV D+G TG
Sbjct: 60 GVADVGVTG 68


>sp|GFCR_METPE|TRANSCRIPTIONAL regulator GfcR|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 VDDLGTTGR 10
VDD+ T+GR
Sbjct: 152 VDDVITSGR 160


>sp|COFH1_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina mazei (strain ATCC

Query: 1 GVDDLGTT 8
GV+DLG T
Sbjct: 307 GVNDLGGT 314


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GVDDLGTTGR 10
G+D LG GR
Sbjct: 95 GIDMLGHNGR 104


>sp|PYRE_SULTO|OROTATE phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VDDLGTTG 9
VDD+ TTG
Sbjct: 111 VDDVATTG 118


>sp|HIS1_METM5|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 GVDDLGTTG 9
GV D+G TG
Sbjct: 60 GVADVGVTG 68


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 1 GVDDLGTTGR 10
G+D LG GR
Sbjct: 95 GIDMLGHNGR 104


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 GVDDLGTTGR 10
G+D LG GR
Sbjct: 95 GIDMLGHNGR 104


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GVDDLGTTGR 10
G+D LG GR
Sbjct: 95 GIDMLGHNGR 104


>sp|DNLI_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DDLGTTGR 10
DDLGT R
Sbjct: 35 DDLGTVAR 42


>sp|HIS1_METAR|ATP phosphoribosyltransferase|Methanocella arvoryzae (strain DSM

Query: 1 GVDDLGTTG 9
G DLG TG
Sbjct: 61 GAADLGITG 69


>sp|PYRE_METKA|OROTATE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 VDDLGTTG 9
VDD+ TTG
Sbjct: 114 VDDVATTG 121


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVDDLG 6
G+DDLG
Sbjct: 283 GIDDLG 288


>sp|FRHB_METBF|COENZYME F420 hydrogenase subunit beta|Methanosarcina barkeri (strain Fusaro

Query: 1 GVDDLGTTG 9
G+D +G TG
Sbjct: 97 GLDKVGVTG 105


>sp|SRP54_HALLT|SIGNAL recognition particle 54 kDa|Halorubrum lacusprofundi (strain ATCC

Query: 2 VDDLGTTGR 10
+DDLGT+ R
Sbjct: 3 LDDLGTSLR 11




40|Sequence|196|205|GTTGRGNDMQ

>sp|ASSY_THEVO|ARGININOSUCCINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GTTGRGND 8
G+TGRGND
Sbjct: 113 GSTGRGND 120


>sp|ASSY_THEAC|ARGININOSUCCINATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GTTGRGND 8
G+TGRGND
Sbjct: 113 GSTGRGND 120


>sp|ASSY_PICTO|ARGININOSUCCINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 GTTGRGND 8
G+TG+GND
Sbjct: 113 GSTGKGND 120


>sp|ASSY_PYRFU|ARGININOSUCCINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 114 GCTGKGND 121


>sp|ASSY_METVA|ARGININOSUCCINATE synthase|Methanococcus vannielii

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 117 GCTGKGND 124


>sp|ASSY_METTH|ARGININOSUCCINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 120 GCTGKGND 127


>sp|ASSY_METST|ARGININOSUCCINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 115 GCTGKGND 122


>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 117 GCTGKGND 124


>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 115 GCTGKGND 122


>sp|ASSY_METJA|ARGININOSUCCINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 116 GCTGKGND 123


>sp|ASSY_METBF|ARGININOSUCCINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 116 GCTGKGND 123


>sp|ASSY_METAC|ARGININOSUCCINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 116 GCTGKGND 123


>sp|ASSY_ARCFU|ARGININOSUCCINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 113 GCTGKGND 120


>sp|ASSY_METMA|ARGININOSUCCINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 116 GCTGKGND 123


>sp|ASSY_METBU|ARGININOSUCCINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 116 GCTGKGND 123


>sp|ASSY_METBA|ARGININOSUCCINATE synthase|Methanosarcina barkeri

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 116 GCTGKGND 123


>sp|ASSY_NATPD|ARGININOSUCCINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GTTGRGND 8
G+TG+GND
Sbjct: 117 GSTGKGND 124


>sp|ASSY_METHJ|ARGININOSUCCINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 117 GCTGKGND 124


>sp|ASSY_HALSA|ARGININOSUCCINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 116 GCTGKGND 123


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GTTGRGN 7
G TGRGN
Sbjct: 283 GMTGRGN 289


>sp|ASSY_SULTO|ARGININOSUCCINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GTTGRGND 8
G+T +GND
Sbjct: 114 GSTSKGND 121


>sp|ASSY_SULAC|ARGININOSUCCINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GTTGRGND 8
G+T +GND
Sbjct: 114 GSTSKGND 121


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GTTGRGND 8
G+T +GND
Sbjct: 114 GSTSKGND 121


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GTTGRGND 8
G+T +GND
Sbjct: 117 GSTSKGND 124


>sp|ASSY_METS5|ARGININOSUCCINATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GTTGRGND 8
G+T +GND
Sbjct: 114 GSTSKGND 121


>sp|METK_AERPE|S-ADENOSYLMETHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GTTGRGN 7
G TGRGN
Sbjct: 285 GATGRGN 291


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 TTGRGND 8
TTG GND
Sbjct: 595 TTGLGND 601


>sp|ASSY_HALWD|ARGININOSUCCINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 114 GCTGKGND 121


>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GTTGRGND 8
G T +GND
Sbjct: 115 GATSKGND 122


>sp|ASSY_HALMA|ARGININOSUCCINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GTTGRGND 8
G TG+GND
Sbjct: 118 GCTGKGND 125




41|Sequence|201|210|GNDMQVGTYI

>sp|METXA_METBU|HOMOSERINE O-acetyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 2 NDMQVGTYI 10
ND QVG+Y+
Sbjct: 255 NDFQVGSYL 263


>sp|TDH_THEKO|L-THREONINE 3-dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DMQVGTYI 10
D+QVG YI
Sbjct: 82 DLQVGDYI 89


>sp|RS5_METLZ|SMALL ribosomal subunit protein uS5|Methanocorpusculum labreanum

Query: 1 GNDMQVGTYI 10
G D+QVGT I
Sbjct: 89 GRDVQVGTAI 98


>sp|GCSH1_SACS2|PROBABLE glycine cleavage system H|Saccharolobus solfataricus (strain ATCC

Query: 2 NDMQVGTYI 10
N+M+VG Y+
Sbjct: 2 NEMKVGRYV 10


>sp|OTC_PICTO|ORNITHINE carbamoyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 NDMQVG 7
NDMQ+G
Sbjct: 71 NDMQIG 76


>sp|SYY_NATPD|TYROSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GNDMQVGTY 9
G D++ GTY
Sbjct: 285 GGDLEYGTY 293


>sp|PYRH_METTH|URIDYLATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GNDMQVGTY 9
G+D++ GTY
Sbjct: 172 GSDVRAGTY 180


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC

Query: 1 GNDMQVGTYI 10
GND + G Y+
Sbjct: 14 GNDARAGDYV 23


>sp|PXPA_PYRHO|5-OXOPROLINASE subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NDMQVGTY 9
ND+QVG +
Sbjct: 55 NDVQVGAH 62


>sp|IF5A_SULAC|TRANSLATION initiation factor 5A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DMQVGTYI 10
D++VG+Y+
Sbjct: 10 DLKVGSYV 17


>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GNDMQVGTYI 10
GN+M G Y+
Sbjct: 200 GNEMAPGGYV 209


>sp|RS5_METMJ|SMALL ribosomal subunit protein uS5|Methanoculleus marisnigri (strain

Query: 1 GNDMQVGTYI 10
G D+QVG I
Sbjct: 89 GKDVQVGNAI 98


>sp|PYRH_METST|URIDYLATE kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NDMQVGTY 9
ND + GTY
Sbjct: 173 NDTKAGTY 180




42|Sequence|206|215|VGTYIEKMFM

>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GTYIEKMF 9
GTYI K+F
Sbjct: 166 GTYIRKLF 173


>sp|COBQ_METPE|PROBABLE cobyric acid synthase|Methanosphaerula palustris (strain ATCC

Query: 2 GTYIEKMFM 10
GTY+ +FM
Sbjct: 419 GTYLHGLFM 427


>sp|SPSS1_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VGTYIEK 7
GTY+EK
Sbjct: 93 AGTYVEK 99




43|Sequence|211|220|EKMFMSELSG

>sp|PSA_SACS2|PROTEASOME subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KMFMSELSG 10
K+FM+E SG
Sbjct: 149 KLFMTEPSG 157


>sp|PSA_METS5|PROTEASOME subunit alpha|Metallosphaera sedula (strain ATCC 51363

Query: 2 KMFMSELSG 10
K+FM+E SG
Sbjct: 149 KLFMTEPSG 157


>sp|GUAAB_METVS|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 1 EKMFMSELSG 10
+ +F+SEL+G
Sbjct: 85 KDLFLSELAG 94




44|Sequence|216|225|SELSGNIIDI

>sp|RL2_METMJ|LARGE ribosomal subunit protein uL2|Methanoculleus marisnigri (strain

Query: 3 LSGNIIDI 10
+SGN+IDI
Sbjct: 38 VSGNVIDI 45


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 SELSGNIID 9
+ LSGNI+D
Sbjct: 933 AALSGNIVD 941


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 SELSGNIID 9
+ LSGNI+D
Sbjct: 933 AALSGNIVD 941


>sp|CAS1_KORCO|CRISPR-ASSOCIATED endonuclease Cas1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 SELSGNIID 9
++L GN+ID
Sbjct: 200 TDLEGNVID 208


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SELSGNIID 9
SEL NIID
Sbjct: 145 SELKRNIID 153


>sp|RL2_METB6|LARGE ribosomal subunit protein uL2|Methanoregula boonei (strain DSM

Query: 3 LSGNIIDI 10
+SG+IIDI
Sbjct: 38 ISGSIIDI 45


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SELSGNIIDI 10
S+ GNI+DI
Sbjct: 523 SKSKGNIVDI 532


>sp|RS8_ARCFU|SMALL ribosomal subunit protein uS8|Archaeoglobus fulgidus (strain ATCC

Query: 2 ELSGNIID 9
ELSGNI D
Sbjct: 63 ELSGNIND 70


>sp|CSG_METBF|MAJOR S-layer protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 SELSGNII 8
SEL+GN+I
Sbjct: 349 SELNGNVI 356


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SELSGNIIDI 10
S+ GNI+DI
Sbjct: 523 SKSKGNIVDI 532


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 2 ELSGNIIDI 10
ELS N++DI
Sbjct: 489 ELSDNMVDI 497


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELSGNIID 9
E +GNIID
Sbjct: 837 EFNGNIID 844


>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SELSGNIID 9
SEL NI+D
Sbjct: 143 SELKRNIVD 151




45|Sequence|221|230|NIIDICPVGA

>sp|FLPA_THEVO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma volcanium (strain

Query: 1 NIIDICPVG 9
+I DICP G
Sbjct: 90 HISDICPAG 98


>sp|TRM1_META3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus aeolicus

Query: 1 NIIDICPVGA 10
N++DI P GA
Sbjct: 129 NVVDIDPFGA 138


>sp|MVHB_METTH|POLYFERREDOXIN protein MvhB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 NIIDICPVGA 10
+DICP GA
Sbjct: 42 KCVDICPTGA 51


Query: 1 NIIDICPVG 9
+DICPVG
Sbjct: 112 KCVDICPVG 120


>sp|ARLY_METMA|ARGININOSUCCINATE lyase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IDICPVGA 10
+++CP+GA
Sbjct: 189 VNLCPLGA 196


>sp|ARLY_METBF|ARGININOSUCCINATE lyase|Methanosarcina barkeri (strain Fusaro /

Query: 3 IDICPVGA 10
+++CP+GA
Sbjct: 189 VNLCPLGA 196


>sp|ARLY_METAC|ARGININOSUCCINATE lyase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IDICPVGA 10
+++CP+GA
Sbjct: 189 VNLCPLGA 196


>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 IDICPVGA 10
++ICP+G+
Sbjct: 195 VNICPLGS 202


>sp|MVHB_METTM|POLYFERREDOXIN protein MvhB|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 NIIDICPVG 9
+DICPVG
Sbjct: 112 KCVDICPVG 120


Query: 1 NIIDICPVGA 10
+D CP GA
Sbjct: 42 KCVDACPTGA 51


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 3 IDICPVG 9
+D CPVG
Sbjct: 100 VDFCPVG 106


>sp|MVHB_METFE|POLYFERREDOXIN protein MvhB|Methanothermus fervidus

Query: 1 NIIDICPVG 9
N +D+CP G
Sbjct: 370 NCVDVCPYG 378


>sp|GCH31_HALSA|GTP cyclohydrolase III 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 NIIDICP 7
NII +CP
Sbjct: 190 NIIAVCP 196


>sp|Y51B_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0514.2|Methanocaldococcus jannaschii

Query: 1 NIIDICPVG 9
N I++CP G
Sbjct: 92 NCIEVCPTG 100


>sp|TRM1_METJA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocaldococcus

Query: 1 NIIDICPVGA 10
N++DI P G+
Sbjct: 126 NVVDIDPFGS 135


>sp|AROC_IGNH4|CHORISMATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 IIDICPVG 9
+ID CP G
Sbjct: 26 VIDGCPAG 33


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 3 IDICPVGA 10
+ ICP GA
Sbjct: 604 LQICPAGA 611


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 3 IDICPVGA 10
+ ICP GA
Sbjct: 604 LQICPAGA 611


>sp|Y51A_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0514.1|Methanocaldococcus

Query: 3 IDICPVGA 10
I+ICPV A
Sbjct: 46 IEICPVNA 53


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 3 IDICPVGA 10
I++CP GA
Sbjct: 598 IELCPFGA 605


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 3 IDICPVGA 10
I++CP GA
Sbjct: 599 IELCPFGA 606


>sp|FER4_METJA|UNCHARACTERIZED ferredoxin MJ0199|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DICPVGA 10
D+CP GA
Sbjct: 50 DVCPTGA 56


>sp|Y631_METJA|PUTATIVE hydrogenase maturation protease MJ0631|Methanocaldococcus

Query: 2 IIDICPV 8
IID CP+
Sbjct: 137 IIDFCPI 143


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 1 NIIDICPVGA 10
NI+D+ P G+
Sbjct: 133 NIVDLDPFGS 142


>sp|AMZA_HALWD|ARCHAEMETZINCIN walsbyi (strain DSM 16790

Query: 2 IIDICPVG 9
++DI P+G
Sbjct: 2 LVDIVPIG 9


>sp|FER_METAC|FERREDOXIN acetivorans (strain ATCC 35395

Query: 5 ICPVGA 10
ICPVGA
Sbjct: 92 ICPVGA 97


>sp|AROC_METTP|CHORISMATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 IIDICPVG 9
++D CP G
Sbjct: 27 VVDGCPAG 34


>sp|GGR_METM6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C6 /

Query: 4 DICPVG 9
DICP G
Sbjct: 200 DICPKG 205


>sp|AROC_METTH|CHORISMATE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 IIDICPVG 9
+ID CP G
Sbjct: 33 VIDGCPAG 40


>sp|Y314_METJA|UNCHARACTERIZED protein MJ0314|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NIIDIC 6
N+ID+C
Sbjct: 232 NLIDVC 237


>sp|ATGT_NATPD|TRNA-GUANINE(15) transglycosylase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 IDICPVGA 10
+D+ PVGA
Sbjct: 189 LDVFPVGA 196


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 3 IDICPVGA 10
+D+ PVGA
Sbjct: 189 LDVFPVGA 196


>sp|GGR_METM5|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C5 /

Query: 4 DICPVG 9
DICP G
Sbjct: 200 DICPKG 205


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IIDICPVG 9
I+D+ P+G
Sbjct: 83 IVDLMPIG 90


>sp|TBP_PYRHO|TATA-BOX-BINDING protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IIDICP 7
++DICP
Sbjct: 29 VLDICP 34


>sp|TRM1_METMP|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 NIIDICPVGA 10
N++D+ P G+
Sbjct: 126 NVVDLDPFGS 135


>sp|TRM1_METMI|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 NIIDICPVGA 10
N++D+ P G+
Sbjct: 126 NVVDLDPFGS 135


>sp|TRM1_METM7|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 NIIDICPVGA 10
N++D+ P G+
Sbjct: 126 NVVDLDPFGS 135


>sp|TRM1_METM6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 NIIDICPVGA 10
N++D+ P G+
Sbjct: 126 NVVDLDPFGS 135


>sp|TRM1_METM5|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 NIIDICPVGA 10
N++D+ P G+
Sbjct: 126 NVVDLDPFGS 135


>sp|G3P_NATPD|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 IIDICPVG 9
++D CP G
Sbjct: 83 VVDACPSG 90


>sp|FWDF_METJA|POLYFERREDOXIN protein FwdF|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DICPVGA 10
DICPV A
Sbjct: 41 DICPVNA 47


>sp|AROC_METAR|CHORISMATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 IIDICPVG 9
+ID CP G
Sbjct: 26 VIDGCPAG 33


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 4 DICPVG 9
DICP G
Sbjct: 200 DICPKG 205


>sp|Y749_METJA|UNCHARACTERIZED protein MJ0749|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 ICPVGA 10
+CPVG+
Sbjct: 169 VCPVGS 174


>sp|GGR_META3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 DICPVG 9
DICP G
Sbjct: 201 DICPKG 206


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 3 IDICPVGA 10
+++CP GA
Sbjct: 593 VELCPYGA 600


>sp|GLCD1_CALMQ|GLUCOSE 1-dehydrogenase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 IDICPVG 9
+D CP+G
Sbjct: 100 VDYCPMG 106


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 ICPVGA 10
+CP+GA
Sbjct: 23 VCPIGA 28


>sp|TBP_PYRAB|TATA-BOX-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 1 NIIDICP 7
++DICP
Sbjct: 28 KVLDICP 34


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 6 CPVGA 10
CPVGA
Sbjct: 619 CPVGA 623


>sp|GGR_METMP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain DSM 14266

Query: 4 DICPVG 9
DICP G
Sbjct: 200 DICPKG 205




46|Sequence|226|235|CPVGALTSKP

>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CPVGALTSK 9
CP+GA+T K
Sbjct: 24 CPIGAVTVK 32


>sp|Y749_METJA|UNCHARACTERIZED protein MJ0749|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPVGALTS 8
CPVG+L S
Sbjct: 170 CPVGSLLS 177


>sp|ASSY_METBU|ARGININOSUCCINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PVGALTSKP 10
PVG T+KP
Sbjct: 162 PVGVTTAKP 170


>sp|MVHB_METFE|POLYFERREDOXIN protein MvhB|Methanothermus fervidus

Query: 1 CPVGALTSKP 10
CP GA++ KP
Sbjct: 19 CPTGAISVKP 28


>sp|FER_THEKO|FERREDOXIN kodakarensis (strain ATCC BAA-918

Query: 1 CPVGALT 7
CPVGA+T
Sbjct: 53 CPVGAIT 59


>sp|Y084_METJA|UNCHARACTERIZED ATP-binding protein MJ0084|Methanocaldococcus jannaschii (strain

Query: 1 CPVGAL 6
CP+GAL
Sbjct: 118 CPMGAL 123


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 2 PVGALTSK 9
P+GA+T K
Sbjct: 275 PIGAITGK 282


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 2 PVGALTSK 9
P+GA+T K
Sbjct: 275 PIGAITGK 282


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 2 PVGALTSK 9
P+GA+T K
Sbjct: 275 PIGAITGK 282


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PVGALTSK 9
P+GA+T K
Sbjct: 275 PIGAITGK 282


>sp|AROA_KORCO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PVGALTSKP 10
P+G L S+P
Sbjct: 186 PIGELVSRP 194


>sp|FER2_THEAC|PROBABLE ferredoxin TA0517|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 CPVGALTSK 9
CP GA+T++
Sbjct: 56 CPTGAITAE 64


>sp|FPOI_METMA|F(420)H(2) dehydrogenase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CPVGALTS 8
CP GAL+S
Sbjct: 135 CPKGALSS 142


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 CPVGAL 6
CPVGA+
Sbjct: 619 CPVGAI 624


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 CPVGAL 6
CPVGA+
Sbjct: 619 CPVGAI 624


>sp|FER_THELI|FERREDOXIN litoralis

Query: 1 CPVGALT 7
CP GA+T
Sbjct: 51 CPTGAIT 57


>sp|FER_METAC|FERREDOXIN acetivorans (strain ATCC 35395

Query: 1 CPVGAL 6
CPVGA+
Sbjct: 93 CPVGAI 98


>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CPVGAL 6
CP+GA+
Sbjct: 190 CPIGAV 195




47|Sequence|231|240|LTSKPYAFTA

>sp|RS2_SULTO|SMALL ribosomal subunit protein uS2|Sulfurisphaera tokodaii (strain DSM

Query: 1 LTSKPYAFT 9
+TS+PYAFT
Sbjct: 94 VTSRPYAFT 102


>sp|Y686_METJA|UNCHARACTERIZED protein MJ0686|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TSKPYAF 8
T+KPYAF
Sbjct: 114 TTKPYAF 120


>sp|RS2_METS5|SMALL ribosomal subunit protein uS2|Metallosphaera sedula (strain ATCC

Query: 1 LTSKPYAFT 9
+ S+PYAFT
Sbjct: 94 VASRPYAFT 102


>sp|RS2_SULAC|SMALL ribosomal subunit protein uS2|Sulfolobus acidocaldarius (strain

Query: 1 LTSKPYAFT 9
+ S+PYAFT
Sbjct: 94 VASRPYAFT 102


>sp|RS2_CALMQ|SMALL ribosomal subunit protein uS2|Caldivirga maquilingensis (strain

Query: 2 TSKPYAF 8
++KPYAF
Sbjct: 82 STKPYAF 88


>sp|AROA_METLZ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 LTSKPY 6
LTSKPY
Sbjct: 189 LTSKPY 194


>sp|G1PDH_METST|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaera stadtmanae (strain ATCC

Query: 1 LTSKPYAFTA 10
++ PY FTA
Sbjct: 154 ISQAPYRFTA 163




48|Sequence|236|245|YAFTARPWET

>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YAFTARPW 8
YAFT R W
Sbjct: 390 YAFTYRAW 397


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 FTARPWE 9
FT PWE
Sbjct: 5 FTVTPWE 11


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 YAFTARPWE 9
Y TA PW+
Sbjct: 129 YGPTANPWD 137


>sp|SYW_SACS2|TRYPTOPHAN--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FTARPWE 9
FT PWE
Sbjct: 5 FTVTPWE 11


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YAFTARPWE 9
Y A+PWE
Sbjct: 444 YFQNAKPWE 452


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YAFTARPWE 9
+ F+AR W+
Sbjct: 203 FRFSARDWD 211


>sp|Y118_ARCFU|UNCHARACTERIZED protein AF_0118|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 TARPWET 10
TAR WE+
Sbjct: 26 TARKWES 32


>sp|Y1308_PYRFU|PUTATIVE antitoxin PF1308|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YAFTARPWE 9
+ FT PW+
Sbjct: 11 FCFTTYPWK 19


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 YAFTARPWET 10
+ FT PW +
Sbjct: 616 FFFTGAPWNS 625




49|Sequence|241|250|RPWETRKTES

>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 2 PWETRKTES 10
PW+TR S
Sbjct: 51 PWKTRGNAS 59


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RPWETRKTE 9
+PWE KT+
Sbjct: 449 KPWELIKTD 457


>sp|DHQS_HALSA|3-DEHYDROQUINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 WETRK 7
WETRK
Sbjct: 16 WETRK 20


>sp|DHQS_HALS3|3-DEHYDROQUINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 WETRK 7
WETRK
Sbjct: 16 WETRK 20




50|Sequence|246|255|RKTESIDVMD

>sp|Y1509_METJA|UNCHARACTERIZED protein MJ1509|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KTESIDVMD 10
KTE+ D+MD
Sbjct: 25 KTEAEDIMD 33




51|Sequence|251|260|IDVMDAVGSN

>sp|YPV9_METTF|UNCHARACTERIZED protein ORF9|Methanothermobacter thermautotrophicus

Query: 2 DVMDAVGSN 10
DV+DA+G N
Sbjct: 94 DVVDAIGLN 102


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IDVMDAVGS 9
+D+MDA GS
Sbjct: 219 LDIMDATGS 227


>sp|HMDH_ARCFU|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IDVMDAVGSN 10
+DV DA+G+N
Sbjct: 194 VDVKDAMGAN 203


>sp|TRPD_IGNH4|ANTHRANILATE phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 DVMDAVGSN 10
DVM+A+G N
Sbjct: 122 DVMEALGYN 130


>sp|GATE_DESA1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Desulfurococcus amylolyticus (strain DSM

Query: 2 DVMDAVGSN 10
DV+DAV +N
Sbjct: 535 DVLDAVANN 543


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 IDVMDAVGSN 10
ID +DAVG++
Sbjct: 277 IDEIDAVGAS 286


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 IDVMDAVGSN 10
+DVM ++G+N
Sbjct: 416 VDVMKSLGAN 425


>sp|HYPB_METJA|PROBABLE hydrogenase maturation factor HypB|Methanocaldococcus jannaschii

Query: 1 IDVMDAVGSN 10
ID+ DAVG++
Sbjct: 169 IDLADAVGAD 178




52|Sequence|256|265|AVGSNIVVST

>sp|UVRC_NATPD|UVRABC system protein C|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AVGSNIV 7
AVGSN+V
Sbjct: 390 AVGSNVV 396


>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VGSNIVVST 10
+G+N+VV+T
Sbjct: 178 LGANVVVAT 186


>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GSNIVVST 10
GS+I++ST
Sbjct: 318 GSSIIIST 325


>sp|PFDA_THEPD|PREFOLDIN subunit alpha|Thermofilum pendens (strain DSM 2475

Query: 1 AVGSNIVV 8
A+GSNI+V
Sbjct: 78 AIGSNILV 85




53|Sequence|261|270|IVVSTRTGEV

>sp|Y286_METMP|UPF0248 protein MMP0286|Methanococcus maripaludis (strain DSM 14266

Query: 2 VVSTRTGEV 10
+V+T+TGE+
Sbjct: 63 IVNTKTGEI 71


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 IVVSTRTGEV 10
+ VSTR GEV
Sbjct: 612 VKVSTRRGEV 621


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IVVSTRTGEV 10
+V+S+RT E+
Sbjct: 498 VVISSRTKEI 507


>sp|ENO_SULTO|ENOLASE tokodaii (strain DSM 16993

Query: 1 IVVSTRTGE 9
I+VS R+GE
Sbjct: 355 IIVSHRSGE 363


>sp|THIL_PYRAB|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 IVVSTRTGEV 10
+VVS R GE+
Sbjct: 1 MVVSMREGEI 10


>sp|ENO_ARCFU|ENOLASE fulgidus (strain ATCC 49558

Query: 1 IVVSTRTGE 9
+VVS R+GE
Sbjct: 342 VVVSHRSGE 350


>sp|ENO_META3|ENOLASE aeolicus (strain ATCC BAA-1280

Query: 1 IVVSTRTGE 9
+VVS R+GE
Sbjct: 361 VVVSHRSGE 369


>sp|RPO1C_METS5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Metallosphaera sedula (strain ATCC

Query: 3 VSTRTGEV 10
+ TRTGEV
Sbjct: 316 IMTRTGEV 323


>sp|ENO_THEON|ENOLASE onnurineus (strain NA1)

Query: 1 IVVSTRTGE 9
+VVS R+GE
Sbjct: 364 VVVSHRSGE 372


>sp|ENO_METJA|ENOLASE jannaschii (strain ATCC 43067

Query: 1 IVVSTRTGE 9
+VVS R+GE
Sbjct: 359 VVVSHRSGE 367


>sp|ENO_THEGJ|ENOLASE gammatolerans (strain DSM 15229

Query: 1 IVVSTRTGE 9
+VVS R+GE
Sbjct: 364 VVVSHRSGE 372


>sp|ENO_THEKO|ENOLASE kodakarensis (strain ATCC BAA-918

Query: 1 IVVSTRTGE 9
+VVS R+GE
Sbjct: 364 VVVSHRSGE 372


>sp|ENO_PYRAB|ENOLASE abyssi (strain GE5 /

Query: 1 IVVSTRTGE 9
+VVS R+GE
Sbjct: 362 VVVSHRSGE 370




54|Sequence|266|275|RTGEVMRILP

>sp|RS4E_METTH|SMALL ribosomal subunit protein eS4|Methanothermobacter

Query: 1 RTGEVMRILP 10
RTG+V R+LP
Sbjct: 95 RTGDVYRVLP 104


>sp|RS4E_PYRAE|SMALL ribosomal subunit protein eS4|Pyrobaculum aerophilum (strain ATCC

Query: 2 TGEVMRILP 10
TGEV R++P
Sbjct: 91 TGEVYRVVP 99


>sp|RS4E_METS3|SMALL ribosomal subunit protein eS4|Methanobrevibacter smithii (strain

Query: 1 RTGEVMRIL 9
+TGEV R+L
Sbjct: 95 KTGEVYRVL 103


>sp|RS4E_PYRAR|SMALL ribosomal subunit protein eS4|Pyrobaculum arsenaticum (strain DSM

Query: 2 TGEVMRILP 10
TGEV R++P
Sbjct: 91 TGEVYRVVP 99


>sp|RS4E_PYRIL|SMALL ribosomal subunit protein eS4|Pyrobaculum islandicum (strain DSM

Query: 2 TGEVMRILP 10
TGE+ R++P
Sbjct: 91 TGEIYRVVP 99


>sp|RS4E_PYRCJ|SMALL ribosomal subunit protein eS4|Pyrobaculum calidifontis (strain

Query: 2 TGEVMRILP 10
TGE+ R++P
Sbjct: 91 TGEIYRVVP 99


>sp|RS4E_PYRNV|SMALL ribosomal subunit protein eS4|Pyrobaculum neutrophilum (strain

Query: 2 TGEVMRILP 10
TGE+ R++P
Sbjct: 91 TGEIYRVVP 99


>sp|RS4E_HYPBU|SMALL ribosomal subunit protein eS4|Hyperthermus butylicus (strain DSM

Query: 2 TGEVMRILP 10
TGE R+LP
Sbjct: 96 TGEFYRVLP 104


>sp|MBD_THEVO|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma volcanium (strain ATCC

Query: 1 RTGEVMRIL 9
+TGE +RIL
Sbjct: 290 QTGESLRIL 298


>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RTGEVMR 7
RTGE+M+
Sbjct: 694 RTGEIMK 700


>sp|RS4E_THEKO|SMALL ribosomal subunit protein eS4|Thermococcus kodakarensis (strain

Query: 2 TGEVMRILP 10
TGE R+LP
Sbjct: 96 TGEHYRVLP 104


>sp|RS4E_PYRHO|SMALL ribosomal subunit protein eS4|Pyrococcus horikoshii (strain ATCC

Query: 2 TGEVMRILP 10
TGE R+LP
Sbjct: 96 TGEHYRVLP 104


>sp|RS4E_PYRFU|SMALL ribosomal subunit protein eS4|Pyrococcus furiosus (strain ATCC

Query: 2 TGEVMRILP 10
TGE R+LP
Sbjct: 96 TGEHYRVLP 104


>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 2 TGEVMRILP 10
TGE R+LP
Sbjct: 96 TGEHYRVLP 104


>sp|PURQ_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain C5 /

Query: 1 RTGEVMRILP 10
+TG +M ++P
Sbjct: 212 KTGRIMGLMP 221


>sp|RS4E_STAMF|SMALL ribosomal subunit protein eS4|Staphylothermus marinus (strain ATCC

Query: 2 TGEVMRILP 10
TGE R++P
Sbjct: 96 TGETYRVIP 104


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 RTGEVMRILP 10
+T E+M ++P
Sbjct: 438 KTNEIMPVIP 447


>sp|RSMA_PYRIL|PROBABLE ribosomal RNA small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 4 EVMRILP 10
EV+RILP
Sbjct: 148 EVLRILP 154


>sp|PMDHS_METKA|PHOSPHOMEVALONATE dehydratase small subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 TGEVMRILP 10
TG+V+++LP
Sbjct: 121 TGDVVKLLP 129


>sp|RS4E_AERPE|SMALL ribosomal subunit protein eS4|Aeropyrum pernix (strain ATCC 700893

Query: 2 TGEVMRILP 10
TGE R+LP
Sbjct: 96 TGEKFRMLP 104


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 RTGEVMRILP 10
+T EVM I+P
Sbjct: 428 KTEEVMPIIP 437


>sp|COMD_METTH|SULFOPYRUVATE decarboxylase subunit alpha|Methanothermobacter thermautotrophicus

Query: 2 TGEVMRIL 9
TG+++RIL
Sbjct: 118 TGDILRIL 125


>sp|METE_AERPE|METHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GEVMRILP 10
GE+ RILP
Sbjct: 221 GELERILP 228


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RTGEVMRIL 9
+TG+V+R+L
Sbjct: 132 KTGDVVRLL 140




55|Sequence|271|280|MRILPRMHED

>sp|Y172_ARCFU|UNCHARACTERIZED protein AF_0172|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MRILPRM 7
MR+LP+M
Sbjct: 1 MRLLPKM 7


>sp|SELB_METJA|SELENOCYSTEINE-SPECIFIC elongation factor|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MRILPRMHE 9
+RILP HE
Sbjct: 222 LRILPINHE 230


>sp|COABC_METJA|COENZYME A biosynthesis bifunctional protein|Methanocaldococcus jannaschii

Query: 3 ILPRMHED 10
I+P MHE+
Sbjct: 134 IVPAMHEN 141


>sp|ARGC_METMP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 MRILPRMHE 9
M I+P +HE
Sbjct: 83 MAIVPTLHE 91


>sp|Y1524_METJA|UPF0166 protein MJ1524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RILPRMHE 9
R+LP+++E
Sbjct: 79 RVLPKLYE 86


>sp|SPEE_PYRAR|POLYAMINE aminopropyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RILPRMHE 9
R LP+MH+
Sbjct: 122 RFLPQMHQ 129


>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 3 ILPRMHED 10
+LP +HED
Sbjct: 303 LLPHLHED 310


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 3 ILPRMHED 10
+LP +HED
Sbjct: 303 LLPHLHED 310


>sp|ARGC_METM5|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C5 /

Query: 1 MRILPRMHE 9
M I+P +HE
Sbjct: 83 MAIVPTLHE 91


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 4 LPRMHED 10
LPR++ED
Sbjct: 114 LPRIYED 120


>sp|PURP_THEKO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Thermococcus kodakarensis (strain ATCC

Query: 4 LPRMHED 10
LPR++ED
Sbjct: 113 LPRIYED 119


>sp|SPEE_PYRNV|POLYAMINE aminopropyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RILPRMHE 9
R LP+MH+
Sbjct: 122 RYLPQMHQ 129


>sp|AATD_HALSA|A-TYPE ATP synthase subunit D|Halobacterium salinarum (strain ATCC 700922

Query: 2 RILPRMHE 9
++LP +HE
Sbjct: 172 KLLPELHE 179


>sp|AATD_HALS3|A-TYPE ATP synthase subunit D|Halobacterium salinarum (strain ATCC 29341

Query: 2 RILPRMHE 9
++LP +HE
Sbjct: 172 KLLPELHE 179


>sp|AATD_NATPD|A-TYPE ATP synthase subunit D|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RILPRMHE 9
++LP +HE
Sbjct: 172 KLLPELHE 179




56|Sequence|276|285|RMHEDINEEW

>sp|TRUB_THEVO|PROBABLE tRNA pseudouridine synthase B|Thermoplasma volcanium (strain ATCC

Query: 1 RMHEDINEE 9
R H DI+EE
Sbjct: 78 RFHSDISEE 86


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 4 EDINEEW 10
E+INE+W
Sbjct: 449 ENINEDW 455


>sp|PYRH_SULAC|URIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 EDINEEW 10
ED NE W
Sbjct: 96 EDFNERW 102


>sp|PTFA_HALVD|PTS system fructose-specific EIIA component|Haloferax volcanii (strain

Query: 2 MHEDINEE 9
MHED+ E+
Sbjct: 128 MHEDVREK 135


>sp|GGR1_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 RMHEDINEEW 10
R H +++E+W
Sbjct: 55 RQHIELDEKW 64


>sp|COFC_METB6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 2 MHEDINEE 9
+H DI+EE
Sbjct: 163 LHTDIDEE 170


>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 MHEDINEE 9
MHE IN++
Sbjct: 210 MHETINDD 217


>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 1 RMHEDINEE 9
++HE+IN++
Sbjct: 127 KLHEEINKK 135


>sp|AATI_METTH|A-TYPE ATP synthase subunit I|Methanothermobacter thermautotrophicus

Query: 5 DINEEW 10
DIN EW
Sbjct: 275 DINAEW 280


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 4 EDINEEW 10
+DINE+W
Sbjct: 187 DDINEDW 193


>sp|PROA_NATPD|GAMMA-GLUTAMYL phosphate reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 MHEDINEEW 10
+HED+ EE+
Sbjct: 264 VHEDVAEEY 272


>sp|Y1429_THEAC|UPF0159 protein Ta1429|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RMHEDINEEW 10
R+ E+I+ +W
Sbjct: 133 RIEEEISRQW 142


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 1 RMHEDINEE 9
R+H +++EE
Sbjct: 105 RVHREVDEE 113


>sp|NEP1_PYRAR|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum arsenaticum (strain

Query: 3 HEDINEEW 10
H D N +W
Sbjct: 178 HGDFNNKW 185


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 1 RMHEDINEEW 10
R EDI + W
Sbjct: 168 RSEEDIEKAW 177


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 3 HEDINEEW 10
HE++++ W
Sbjct: 455 HENVDKRW 462




57|Sequence|281|290|INEEWISDKT

>sp|Y524_METJA|UNCHARACTERIZED protein MJ0524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EWISDKT 10
EWI DKT
Sbjct: 103 EWIKDKT 109


>sp|RL3_METAR|LARGE ribosomal subunit protein uL3|Methanocella arvoryzae (strain DSM

Query: 1 INEEWISD 8
I E WISD
Sbjct: 98 IGEAWISD 105


>sp|COFG_METJA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INEEWISDKT 10
I+EEW+S+K
Sbjct: 337 ISEEWLSEKV 346


>sp|RL30_NATPD|LARGE ribosomal subunit protein uL30|Natronomonas pharaonis (strain

Query: 1 INEEWISDKT 10
I++EW++D T
Sbjct: 79 IDDEWVADNT 88


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 1 INEEWIS 7
INE+W+S
Sbjct: 451 INEDWLS 457


>sp|RL30_SULAC|LARGE ribosomal subunit protein uL30|Sulfolobus acidocaldarius (strain

Query: 1 INEEWISDK 9
+NEE++ DK
Sbjct: 80 VNEEYVKDK 88


>sp|RPO1C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus vannielii (strain ATCC

Query: 1 INEEWISD 8
INEE+I D
Sbjct: 32 INEEYIVD 39


>sp|DGGGP_ARCFU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 INEEWISDKT 10
I+ WI++KT
Sbjct: 160 ISSGWITEKT 169


>sp|DTDA_PYRHO|D-AMINOACYL-TRNA deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EEWISDKT 10
EEWI+D+
Sbjct: 160 EEWINDRA 167


>sp|Y2613_METAC|UNCHARACTERIZED serpin-like protein MA_2613/MA_2612|Methanosarcina acetivorans

Query: 4 EWISDKT 10
EW+ DKT
Sbjct: 171 EWVEDKT 177


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 EEWISDK 9
+EW SDK
Sbjct: 193 DEWRSDK 199


>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC

Query: 4 EWISD 8
EWISD
Sbjct: 60 EWISD 64


>sp|ILVC_CENSY|KETOL-ACID reductoisomerase (NADP(+))|Cenarchaeum symbiosum (strain A)

Query: 2 NEEWIS 7
NEEW+S
Sbjct: 288 NEEWVS 293


>sp|THII_DESA1|TRNA sulfurtransferase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 INEEWIS 7
++EEW+S
Sbjct: 222 LSEEWLS 228


>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 1 INEEWISDK 9
+ +EW++DK
Sbjct: 151 LRKEWMNDK 159


>sp|RL30_METTH|LARGE ribosomal subunit protein uL30|Methanothermobacter

Query: 1 INEEWISDKT 10
I +E+I++KT
Sbjct: 78 ITDEYINEKT 87


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 INEEWISDKT 10
INE W+S K
Sbjct: 342 INENWLSCKV 351


>sp|RS5_METBU|SMALL ribosomal subunit protein uS5|Methanococcoides burtonii (strain

Query: 2 NEEWI 6
NEEW+
Sbjct: 6 NEEWV 10


>sp|NTPTH_ARCFU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NEEWIS 7
NEEW++
Sbjct: 56 NEEWLA 61


>sp|NIKR_METTP|PUTATIVE nickel-responsive regulator|Methanothrix thermoacetophila (strain

Query: 1 INEEWISD 8
I+ EW+SD
Sbjct: 45 IHYEWMSD 52




58|Sequence|286|295|ISDKTRFAYD

>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ISDKTRFAYD 10
+ DK +F+YD
Sbjct: 244 LQDKNKFSYD 253


>sp|Y640_METJA|UNCHARACTERIZED protein MJ0640|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ISDKTRFAYD 10
I DK FAYD
Sbjct: 165 IGDKIIFAYD 174


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 3 DKTRFAYD 10
D+T+ AYD
Sbjct: 201 DRTKLAYD 208


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 3 DKTRFAYD 10
D+T+ AYD
Sbjct: 198 DRTKLAYD 205


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 DKTRFAYD 10
D+T+ AYD
Sbjct: 198 DRTKLAYD 205


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 2 SDKTRFAY 9
SDK RF Y
Sbjct: 39 SDKKRFTY 46


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 2 SDKTRFAYD 10
S KT+FA++
Sbjct: 222 SGKTKFAFE 230


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 ISDKTRFAYD 10
+ D+TR A+D
Sbjct: 347 VPDETRSAFD 356


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ISDKTRFAYD 10
+ D+TR A+D
Sbjct: 347 VPDETRSAFD 356




59|Sequence|291|300|RFAYDGLKRQ

>sp|Y3143_PYRAE|UPF0273 protein PAE3143|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RFAYDGLKR 9
+F Y+GLKR
Sbjct: 43 QFLYNGLKR 51


>sp|ARAT2_THELN|AROMATIC-AMINO-ACID aminotransferase 2|Thermococcus litoralis (strain ATCC 51850

Query: 2 FAYDGLK 8
F YDG+K
Sbjct: 205 FVYDGVK 211


>sp|PYRC_METKA|DIHYDROOROTASE kandleri (strain AV19 /

Query: 1 RFAYDGLK 8
+F YDG++
Sbjct: 387 KFPYDGMR 394


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 FAYDGLKRQ 10
+ YDGL+ Q
Sbjct: 249 YKYDGLRTQ 257




60|Sequence|296|305|GLKRQRLTEP

>sp|T2M4_METJA|TYPE II restriction enzyme MjaIV|Methanocaldococcus jannaschii (strain

Query: 1 GLKRQRLT 8
G+KRQRLT
Sbjct: 122 GIKRQRLT 129


>sp|TRUA_THEVO|TRNA pseudouridine synthase A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GLKRQRL 7
GLKRQRL
Sbjct: 223 GLKRQRL 229


>sp|ASPD_METVS|L-ASPARTATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GLKRQRLTEP 10
GLK + +TEP
Sbjct: 161 GLKPEEITEP 170


>sp|Y068_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 2 LKRQRLTEP 10
LKR +L EP
Sbjct: 226 LKRYKLEEP 234




61|Sequence|301|310|RLTEPMVRNE

>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 RLTEPMVRNE 10
RLT+P+++ E
Sbjct: 60 RLTKPLIKKE 69


>sp|VORA_METTH|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter thermautotrophicus

Query: 3 TEPMVRNE 10
TEP++R+E
Sbjct: 259 TEPLIRSE 266


>sp|VORA_METTM|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter marburgensis

Query: 3 TEPMVRNE 10
TEP++R+E
Sbjct: 259 TEPLIRSE 266


>sp|Y1446_ARCFU|UNCHARACTERIZED protein AF_1446|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LTEPMVRNE 10
L EPMVR E
Sbjct: 109 LDEPMVRPE 117


>sp|RIFK_METAR|RIBOFLAVIN kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 RLTEPMVRNE 10
RLTEP + E
Sbjct: 134 RLTEPFIPAE 143




62|Sequence|306|315|MVRNEKGLLT

>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MVRNEKGLL 9
M+RNEK +L
Sbjct: 177 MIRNEKAVL 185


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VRNEKGLL 9
VRNEKG L
Sbjct: 212 VRNEKGEL 219


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VRNEKGLLT 10
V +EKGLLT
Sbjct: 164 VAHEKGLLT 172


>sp|RRP41_CENSY|EXOSOME complex component Rrp41|Cenarchaeum symbiosum (strain A)

Query: 1 MVRNEKGLL 9
MVR E G+L
Sbjct: 67 MVRTETGIL 75


>sp|OGG1_METTH|PROBABLE N-glycosylase/DNA lyase|Methanothermobacter thermautotrophicus

Query: 2 VRNEKGLL 9
VRNE G+L
Sbjct: 46 VRNEAGVL 53


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 MVRNEKGLLT 10
++ NE+GL+T
Sbjct: 55 LIINEQGLMT 64


>sp|MDH_METJA|L-MALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MVRNEKGLLT 10
+V NEK LLT
Sbjct: 243 IVNNEKRLLT 252




63|Sequence|311|320|KGLLTYTSWE

>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 1 KGLLTYTSWE 10
+G + YT+WE
Sbjct: 400 RGKIAYTAWE 409


>sp|PGK_PYRWO|PHOSPHOGLYCERATE kinase|Pyrococcus woesei

Query: 1 KGLLTYTSW 9
KG+L Y W
Sbjct: 249 KGILKYVDW 257


>sp|PGK_PYRFU|PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGLLTYTSW 9
KG+L Y W
Sbjct: 249 KGILKYVDW 257


>sp|DGGGP_HALSA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GLLTYTSW 9
GLLTYT +
Sbjct: 117 GLLTYTQY 124


>sp|DGGGP_HALS3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GLLTYTSW 9
GLLTYT +
Sbjct: 117 GLLTYTQY 124


>sp|LYSZ_AERPE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Aeropyrum pernix

Query: 6 YTSWE 10
YTSWE
Sbjct: 70 YTSWE 74


>sp|SYY_METBF|TYROSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GLLTYTSWE 10
G +TYTS+E
Sbjct: 273 GNITYTSYE 281


>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 GLLTYTSWE 10
G +TYTS+E
Sbjct: 277 GDVTYTSYE 285


>sp|TF2B2_THEVO|TRANSCRIPTION initiation factor IIB 2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KGLLTYTSW 9
KGL T SW
Sbjct: 79 KGLATEISW 87


>sp|TF2B2_THEAC|TRANSCRIPTION initiation factor IIB 2|Thermoplasma acidophilum (strain ATCC

Query: 1 KGLLTYTSW 9
KGL T SW
Sbjct: 73 KGLATEISW 81


>sp|PROB_METAC|GLUTAMATE 5-kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KGLLTYTSWE 10
KG+ YTS E
Sbjct: 339 KGITNYTSKE 348


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 TYTSWE 10
TYT W+
Sbjct: 344 TYTGWD 349


>sp|TF2B1_THEVO|TRANSCRIPTION initiation factor IIB 1|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KGLLTYTSWE 10
KGL T SW+
Sbjct: 78 KGLSTDISWK 87


>sp|TF2B1_THEAC|TRANSCRIPTION initiation factor IIB 1|Thermoplasma acidophilum (strain ATCC

Query: 1 KGLLTYTSWE 10
KGL T SW+
Sbjct: 78 KGLSTDISWK 87


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GLLTYTSW 9
G+L YT W
Sbjct: 245 GMLGYTDW 252




64|Sequence|316|325|YTSWEDALSR

>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 2 TSWEDALSR 10
TSW DA++R
Sbjct: 88 TSWSDAMAR 96


>sp|LYSZ_AERPE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Aeropyrum pernix

Query: 1 YTSWED 6
YTSWE+
Sbjct: 70 YTSWEE 75


>sp|PYRDB_METMA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina mazei (strain

Query: 2 TSWEDAL 8
+SWEDA+
Sbjct: 255 SSWEDAV 261


>sp|PYRDB_METAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina acetivorans

Query: 2 TSWEDAL 8
+SWEDA+
Sbjct: 252 SSWEDAV 258


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YTSWEDALSR 10
Y WEDA+ R
Sbjct: 493 YGRWEDAVDR 502


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YTSWEDALSR 10
Y WEDA+ R
Sbjct: 493 YGRWEDAVDR 502


>sp|CAS1_THEKO|CRISPR-ASSOCIATED endonuclease Cas1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YTSWEDAL 8
YT W++AL
Sbjct: 161 YTRWDNAL 168


>sp|CS3HE_THETK|CRISPR-ASSOCIATED helicase Cas3|Thermoproteus tenax (strain ATCC 35583

Query: 2 TSWEDA 7
TSWEDA
Sbjct: 393 TSWEDA 398


>sp|PYRDA_AERPE|PUTATIVE dihydroorotate dehydrogenase A (fumarate)|Aeropyrum pernix (strain

Query: 3 SWEDAL 8
SWEDA+
Sbjct: 248 SWEDAV 253


>sp|PYRDB_PYRHO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus horikoshii (strain

Query: 2 TSWEDAL 8
TSW DA+
Sbjct: 244 TSWRDAV 250


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YTSWEDA 7
Y+ W+DA
Sbjct: 341 YSGWDDA 347


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YTSWEDALSR 10
Y W+DA+ R
Sbjct: 493 YARWDDAVDR 502


>sp|CPGS_METTH|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermobacter

Query: 4 WEDAL 8
WEDAL
Sbjct: 212 WEDAL 216


>sp|CPGS_METST|CYCLIC 2,3-diphosphoglycerate synthetase|Methanosphaera stadtmanae (strain

Query: 4 WEDAL 8
WEDAL
Sbjct: 212 WEDAL 216


>sp|CPGS_METS3|CYCLIC 2,3-diphosphoglycerate synthetase|Methanobrevibacter smithii

Query: 4 WEDAL 8
WEDAL
Sbjct: 209 WEDAL 213


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 4 WEDAL 8
WEDAL
Sbjct: 208 WEDAL 212


>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 4 WEDAL 8
WEDAL
Sbjct: 210 WEDAL 214


>sp|COBQ_HALMA|PROBABLE cobyric acid synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 WEDAL 8
WEDAL
Sbjct: 108 WEDAL 112


>sp|PYRDB_THEKO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermococcus kodakarensis

Query: 2 TSWEDAL 8
T+W+DA+
Sbjct: 244 TTWQDAV 250


>sp|PYRDB_PYRFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus furiosus (strain

Query: 2 TSWEDAL 8
T+W+DA+
Sbjct: 241 TTWQDAV 247


>sp|PYRDB_PYRAB|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus abyssi (strain GE5 /

Query: 2 TSWEDAL 8
T+W+DA+
Sbjct: 240 TTWQDAV 246


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TSWEDAL 8
+ WEDAL
Sbjct: 489 SGWEDAL 495


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 YTSWEDA 7
Y+ W+DA
Sbjct: 341 YSGWDDA 347


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 YTSWEDA 7
Y+ W+DA
Sbjct: 341 YSGWDDA 347


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YTSWEDA 7
Y+ W+DA
Sbjct: 341 YSGWDDA 347


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YTSWEDA 7
Y+ W+DA
Sbjct: 341 YSGWDDA 347


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TSWEDA 7
T+WEDA
Sbjct: 627 TTWEDA 632


>sp|GLPK_HALWD|GLYCEROL kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 YTSWEDALSR 10
Y W+DA+ R
Sbjct: 493 YDRWDDAVER 502


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 YTSWED 6
YT W+D
Sbjct: 351 YTGWDD 356


>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 YTSWED 6
YT W+D
Sbjct: 351 YTGWDD 356


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 4 WEDALS 9
W+DALS
Sbjct: 363 WDDALS 368


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 4 WEDALS 9
W+DALS
Sbjct: 363 WDDALS 368


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 WEDALS 9
W+DALS
Sbjct: 362 WDDALS 367


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 TSWEDA 7
T+WEDA
Sbjct: 628 TTWEDA 633


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 TSWEDA 7
T+WEDA
Sbjct: 628 TTWEDA 633


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TSWEDA 7
T+WEDA
Sbjct: 565 TTWEDA 570


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YTSWED 6
YT W+D
Sbjct: 345 YTGWDD 350


>sp|DPHB_HALLT|DIPHTHINE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 SWEDALS 9
WEDAL+
Sbjct: 199 GWEDALA 205


>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 WEDALS 9
WE+ALS
Sbjct: 434 WEEALS 439


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TSWEDA 7
T+WEDA
Sbjct: 625 TTWEDA 630


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 YTSWED 6
YT W+D
Sbjct: 346 YTGWDD 351




65|Sequence|321|330|DALSRVAGML

>sp|Y1790_SULTO|PUTATIVE esterase STK_17900|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DALSRVAGML 10
+ LSR+ GML
Sbjct: 41 EELSRIGGML 50


>sp|COBD_METM7|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 4 SRVAGML 10
SR+AGML
Sbjct: 213 SRIAGML 219


>sp|COBD_METM5|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 4 SRVAGML 10
SR+AGML
Sbjct: 213 SRIAGML 219


>sp|COBD_METMP|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 4 SRVAGML 10
SR+AGML
Sbjct: 213 SRIAGML 219


>sp|Y1126_METTH|UNCHARACTERIZED protein MTH_1126|Methanothermobacter thermautotrophicus (strain

Query: 3 LSRVAGML 10
L RVAGML
Sbjct: 225 LQRVAGML 232


>sp|GGGPS_CENSY|GERANYLGERANYLGLYCERYL phosphate synthase|Cenarchaeum symbiosum (strain A)

Query: 1 DALSRVAGML 10
D LSR+AG +
Sbjct: 235 DKLSRIAGAI 244


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 DALSRVAG 8
DA++R+AG
Sbjct: 83 DAINRIAG 90




66|Sequence|326|335|VAGMLQSFQG

>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 VAGMLQSFQG 10
+AG QSF+G
Sbjct: 159 LAGGFQSFEG 168


>sp|TRPG1_HALMA|ANTHRANILATE synthase component II|Haloarcula marismortui (strain ATCC 43049

Query: 2 AGMLQSFQG 10
AG+ Q FQG
Sbjct: 133 AGLEQGFQG 141


>sp|HEM1_METM5|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C5 /

Query: 1 VAGMLQSFQG 10
V G+L+ FQG
Sbjct: 54 VDGILKDFQG 63


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 VAGMLQSFQG 10
+AG QSF+G
Sbjct: 159 LAGGFQSFEG 168


>sp|BASB_HALS3|CHEMOTACTIC signal transduction system substrate-binding|Halobacterium

Query: 1 VAGMLQSFQG 10
VAG LQS G
Sbjct: 332 VAGALQSVSG 341




67|Sequence|331|340|QSFQGKDVAA

***** No hits found ******


68|Sequence|336|345|KDVAAIAGGL

>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KDVAAIAGGL 10
K+V +IAGGL
Sbjct: 352 KEVVSIAGGL 361


>sp|NEP1_THEVO|RIBOSOMAL RNA small subunit methyltransferase|Thermoplasma volcanium (strain

Query: 1 KDVAAIAGGL 10
+D+AAI GG
Sbjct: 170 EDIAAIIGGF 179


>sp|T1SH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 1 KDVAAIAGG 9
KD+ +AGG
Sbjct: 31 KDIGEVAGG 39


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DVAAIAGGL 10
DV+ IAGG+
Sbjct: 634 DVSEIAGGM 642


>sp|Y661_METJA|UNCHARACTERIZED protein MJ0661|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KDVAAIAGGL 10
KD+A IAG L
Sbjct: 43 KDLAKIAGYL 52


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KDVAAIAGG 9
+D+ AI GG
Sbjct: 833 RDITAILGG 841


>sp|TRPD_HALMA|ANTHRANILATE phosphoribosyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 KDVAAIAGG 9
+D+ AI+GG
Sbjct: 255 RDIEAISGG 263




69|Sequence|341|350|IAGGLVDAEA

>sp|Y419_ARCFU|UNCHARACTERIZED protein AF_0419|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GGLVDAE 9
GGLVDAE
Sbjct: 229 GGLVDAE 235


>sp|NNRD_NATMM|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Natrialba magadii (strain ATCC

Query: 1 IAGGLVDAEA 10
I GLVDAEA
Sbjct: 99 IGPGLVDAEA 108


>sp|G6PI_HALMA|PROBABLE glucose-6-phosphate isomerase|Haloarcula marismortui (strain ATCC

Query: 3 GGLVDAE 9
GGL+DAE
Sbjct: 338 GGLIDAE 344


>sp|GCK_PICTO|GLYCERATE 2-kinase|Picrophilus torridus (strain ATCC 700027

Query: 2 AGGLVDAE 9
AGG+VD++
Sbjct: 362 AGGIVDSD 369


>sp|APE2_AERPE|HOMING endonuclease I-ApeII|Aeropyrum pernix (strain ATCC 700893

Query: 3 GGLVDAEA 10
G++DAEA
Sbjct: 11 AGIIDAEA 18


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 3 GGLVDAEA 10
GG+VD EA
Sbjct: 26 GGVVDVEA 33


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 3 GGLVDAE 9
GGL DAE
Sbjct: 479 GGLTDAE 485


>sp|TRPD_METMJ|ANTHRANILATE phosphoribosyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 1 IAGGLVDAEA 10
IAGG+ AEA
Sbjct: 307 IAGGIAHAEA 316


>sp|GGGPS_METBF|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IAGGLVDAEA 10
+ GG+ DAEA
Sbjct: 201 VGGGIRDAEA 210


>sp|GGGPS_METTP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 IAGGLVDAEA 10
+ GG+ DAEA
Sbjct: 209 VGGGIRDAEA 218


>sp|GSA2_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 2|Cenarchaeum symbiosum (strain A)

Query: 2 AGGLVDAE 9
+GGLVD E
Sbjct: 169 SGGLVDEE 176


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 3 GGLVDAEA 10
GG+VD EA
Sbjct: 27 GGVVDIEA 34




70|Sequence|346|355|VDAEALVALK

>sp|MEND_NATPD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DAEALVAL 9
DAE+LVAL
Sbjct: 255 DAESLVAL 262


>sp|COBQ_METB6|PROBABLE cobyric acid synthase|Methanoregula boonei (strain DSM 21154

Query: 1 VDAEALVAL 9
VD EA+VAL
Sbjct: 469 VDMEAIVAL 477




71|Sequence|351|360|LVALKDLLNR

>sp|SYH_METMP|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LVALKDLLN 9
L+ LKD+LN
Sbjct: 407 LIELKDILN 415


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 1 LVALKDLLNR 10
LVAL+ +LNR
Sbjct: 69 LVALESVLNR 78


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ALKDLLNR 10
A+KD++NR
Sbjct: 504 AVKDIVNR 511


>sp|KHSE_METJA|HOMOSERINE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VALKDLLN 9
V LKDL+N
Sbjct: 190 VGLKDLVN 197




72|Sequence|356|365|DLLNRVDSDT

>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 DLLNRVDSDT 10
DL N++D+DT
Sbjct: 207 DLKNKIDNDT 216


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 DLLNRVDS 8
D LNRVDS
Sbjct: 418 DTLNRVDS 425


>sp|Y158_METJA|UPF0425 pyridoxal phosphate-dependent protein MJ0158|Methanocaldococcus

Query: 1 DLLNRVDSDT 10
++LN++D DT
Sbjct: 133 EILNKIDKDT 142


>sp|GCSPA_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 DLLNRVDSDT 10
DL +++DSDT
Sbjct: 186 DLSSKIDSDT 195


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 3 LNRVDSDT 10
+NRVD+DT
Sbjct: 234 INRVDADT 241


>sp|GCSPA_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 DLLNRVDSDT 10
DL +R+D DT
Sbjct: 186 DLQSRIDGDT 195


>sp|FOLD_HALSA|BIFUNCTIONAL protein FolD|Halobacterium salinarum (strain ATCC 700922

Query: 3 LNRVDSDT 10
+NRVD+DT
Sbjct: 234 INRVDADT 241


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 1 DLLNRVDS 8
D+LNR+D+
Sbjct: 216 DVLNRIDA 223


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DLLNRVDSD 9
D LNRVD D
Sbjct: 447 DELNRVDED 455


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 1 DLLNRVDSD 9
D LNR+D D
Sbjct: 445 DALNRIDED 453


>sp|FOLD1_HALMA|BIFUNCTIONAL protein FolD 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 LNRVDSDT 10
+NRVD+DT
Sbjct: 234 INRVDADT 241




73|Sequence|361|370|VDSDTLCTEE

>sp|CDC6G_HALMA|ORC1-TYPE DNA replication protein 7|Haloarcula marismortui (strain ATCC 43049

Query: 4 DTLCTEE 10
DTLC EE
Sbjct: 196 DTLCEEE 202


>sp|GATE_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 4 DTLCTEE 10
D+LC EE
Sbjct: 155 DSLCVEE 161


>sp|GATE_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 4 DTLCTEE 10
D+LC EE
Sbjct: 155 DSLCVEE 161




74|Sequence|366|375|LCTEEVFPTA

>sp|RL18_METAR|LARGE ribosomal subunit protein uL18|Methanocella arvoryzae (strain DSM

Query: 2 CTEEVFPT 9
C+E+VFP+
Sbjct: 133 CSEDVFPS 140


>sp|TMBL2_PYRFU|PUTATIVE HTH-type transcriptional regulator TrmBL2|Pyrococcus furiosus

Query: 1 LCTEEVF 7
+C EEVF
Sbjct: 216 ICDEEVF 222




75|Sequence|371|380|VFPTAGAGTD

>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VFPTAGAG 8
V+P+AGAG
Sbjct: 510 VYPSAGAG 517


>sp|QUEE_METTH|7-CARBOXY-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VFPTAGAG 8
V PT GAG
Sbjct: 175 VMPTTGAG 182


>sp|SYY_METMJ|TYROSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VFPTAGA 7
VFP AGA
Sbjct: 252 VFPRAGA 258


>sp|PDAD1_METMA|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Methanosarcina mazei (strain ATCC

Query: 1 VFPTAGAGT 9
VF T+GAGT
Sbjct: 10 VFFTSGAGT 18


>sp|FTHS_HALWD|FORMATE--TETRAHYDROFOLATE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VFPTAGAG 8
++P+AGAG
Sbjct: 537 LYPSAGAG 544


>sp|TRUD_PYRAR|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum arsenaticum (strain DSM

Query: 1 VFPTAGAG 8
V P AGAG
Sbjct: 318 VLPVAGAG 325


>sp|CAS5_HALVD|CRISPR-ASSOCIATED protein Cas5|Haloferax volcanii (strain ATCC 29605

Query: 2 FPTAGAGTD 10
PT G GTD
Sbjct: 85 IPTTGLGTD 93




76|Sequence|376|385|GAGTDLRSNY

>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 GAGTDLRS 8
GAG DLRS
Sbjct: 193 GAGGDLRS 200


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus fulgidus

Query: 1 GAGTDLRS 8
G+G+DLR+
Sbjct: 165 GSGSDLRT 172


>sp|HDRB_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina mazei (strain

Query: 1 GAGTDLRSNY 10
GAG +RS Y
Sbjct: 196 GAGGGVRSGY 205


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 GTDLRSNY 10
GT++RS Y
Sbjct: 447 GTEVRSEY 454


>sp|APGM_PYRNV|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GAGTDLR 7
GAG DLR
Sbjct: 80 GAGVDLR 86




77|Sequence|381|390|LRSNYLLNTT

>sp|BACH_HALHP|HALORHODOPSIN halobium (strain port)

Query: 1 LRSNYLLNTT 10
++SN+LLN++
Sbjct: 23 IQSNFLLNSS 32


>sp|1A1D_PYRFU|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus furiosus

Query: 1 LRSNYLLN 8
LR NYLL+
Sbjct: 108 LRGNYLLD 115


>sp|BACH_HALHS|HALORHODOPSIN halobium (strain shark)

Query: 1 LRSNYLLNTT 10
++SN+LLN++
Sbjct: 23 IQSNFLLNSS 32


>sp|BACH_HALMA|HALORHODOPSIN marismortui (strain ATCC 43049

Query: 1 LRSNYLLNTT 10
++SN+LLN++
Sbjct: 23 IQSNFLLNSS 32


>sp|RRP42_THEAC|EXOSOME complex component Rrp42|Thermoplasma acidophilum (strain ATCC

Query: 1 LRSNYLLNT 9
+R NY+L+T
Sbjct: 12 IRKNYILST 20


>sp|BACH_HALVA|CRUXHALORHODOPSIN-3 vallismortis (Halobacterium vallismortis)

Query: 1 LRSNYLLNTT 10
++SN+LLN++
Sbjct: 23 IQSNFLLNSS 32


>sp|RRP42_THEVO|EXOSOME complex component Rrp42|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LRSNYLLNT 9
+R NY+L T
Sbjct: 12 IRKNYILTT 20




78|Sequence|386|395|LLNTTIAGVE

>sp|COBS_THEGJ|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LNTTIAGV 9
LNT IAGV
Sbjct: 92 LNTGIAGV 99


>sp|AATC_DESSY|A-TYPE ATP synthase subunit C|Desulfurococcus sp. (strain SY)

Query: 1 LLNTTIAGV 9
+LNTTIA V
Sbjct: 7 ILNTTIAVV 15




79|Sequence|391|400|IAGVEEADVV

>sp|Y1554_METJA|UNCHARACTERIZED protein MJ1554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IAGVEEADVV 10
+ GV+EAD++
Sbjct: 100 VKGVDEADIL 109


>sp|DHQS_HALWD|3-DEHYDROQUINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GVEEADVV 10
GVEEAD V
Sbjct: 77 GVEEADTV 84


>sp|TRKA_ARCFU|TRK system potassium uptake protein|Archaeoglobus fulgidus (strain

Query: 2 AGVEEADV 9
AGVE ADV
Sbjct: 59 AGVERADV 66


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 3 GVEEAD 8
GVEEAD
Sbjct: 518 GVEEAD 523


>sp|ASSY_HALSA|ARGININOSUCCINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IAGVEEADVV 10
+AG+E+AD
Sbjct: 366 VAGIEQADAT 375


>sp|RISB_THEGJ|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 GVEEADVV 10
GVEE DVV
Sbjct: 44 GVEEVDVV 51


>sp|NFI_METTP|ENDONUCLEASE V|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 IAGVEEADVV 10
+ G++EADV+
Sbjct: 97 LEGIDEADVL 106


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 3 GVEEADVV 10
G+EE DVV
Sbjct: 117 GLEEKDVV 124


>sp|SRP54_METS3|SIGNAL recognition particle 54 kDa|Methanobrevibacter smithii (strain ATCC

Query: 2 AGVEEADV 9
AGVEE++V
Sbjct: 401 AGVEESEV 408




80|Sequence|396|405|EADVVLLVGT

>sp|NPD_PYRHO|NAD-DEPENDENT protein deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EADVVLLVGT 10
EADVV++VGT
Sbjct: 182 EADVVIVVGT 191


>sp|NPD_PYRFU|NAD-DEPENDENT protein deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EADVVLLVGT 10
+ADVVL+VGT
Sbjct: 182 KADVVLVVGT 191


>sp|NPD_THEKO|NAD-DEPENDENT protein deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ADVVLLVGT 10
ADVVL+VGT
Sbjct: 184 ADVVLVVGT 192


>sp|DPH2_METJA|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EADVVLLVGT 10
E DV+L VGT
Sbjct: 179 EGDVILFVGT 188


>sp|NPD_PYRAB|NAD-DEPENDENT protein deacylase|Pyrococcus abyssi (strain GE5 /

Query: 1 EADVVLLVGT 10
+AD VL+VGT
Sbjct: 182 KADAVLVVGT 191


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 ADVVLLVGT 10
ADV L+VGT
Sbjct: 184 ADVCLVVGT 192


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 3 DVVLLVG 9
DVVLLVG
Sbjct: 4 DVVLLVG 10


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 2 ADVVLLVGT 10
AD+++L GT
Sbjct: 141 ADLIILAGT 149


>sp|TRPC_HALMA|INDOLE-3-GLYCEROL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EADVVLLV 8
EADV+LL+
Sbjct: 127 EADVILLI 134


>sp|NPD1_ARCFU|NAD-DEPENDENT protein deacylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ADVVLLVGT 10
ADV+++ GT
Sbjct: 178 ADVIIVAGT 186


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ADVVLLVGT 10
AD+++ VGT
Sbjct: 522 ADIIIHVGT 530


>sp|NPD2_PYRAE|NAD-DEPENDENT protein deacylase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ADVVLLVGT 10
+DV+L+VGT
Sbjct: 175 SDVLLVVGT 183


>sp|CETZ2_HALVD|TUBULIN-LIKE protein CetZ2|Haloferax volcanii (strain ATCC 29605

Query: 1 EADVVLLV 8
EAD VLLV
Sbjct: 156 EADAVLLV 163


>sp|NPD_AERPE|NAD-DEPENDENT protein deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ADVVLLVGT 10
+DV++++GT
Sbjct: 179 SDVMIIIGT 187


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 1 EADVVLLVG 9
EAD+ LVG
Sbjct: 391 EADIYTLVG 399




81|Sequence|401|410|LLVGTNPRFE

>sp|FOLD_HALSA|BIFUNCTIONAL protein FolD|Halobacterium salinarum (strain ATCC 700922

Query: 2 LVGTNPRFE 10
LVG PRF+
Sbjct: 129 LVGGTPRFK 137


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LLVGTNPRFE 10
LL+ NP F+
Sbjct: 237 LLIAVNPEFD 246


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 LVGTNP 7
LVGTNP
Sbjct: 28 LVGTNP 33


>sp|TRPD_METS3|ANTHRANILATE phosphoribosyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 LVGTNPR 8
LVG NPR
Sbjct: 262 LVGGNPR 268


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 LLVGTNPRF 9
LL NPRF
Sbjct: 579 LLTNDNPRF 587


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 LLVGTNPRF 9
LL NPRF
Sbjct: 579 LLTNDNPRF 587


>sp|IF2A_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 LVGTNPR 8
+VGTNP+
Sbjct: 231 VVGTNPK 237


>sp|IF2A_SACI7|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 LVGTNPR 8
+VGTNP+
Sbjct: 231 VVGTNPK 237


>sp|IF2A_SACI6|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain M.16.4

Query: 2 LVGTNPR 8
+VGTNP+
Sbjct: 231 VVGTNPK 237


>sp|IF2A_SACI4|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 LVGTNPR 8
+VGTNP+
Sbjct: 231 VVGTNPK 237


>sp|IF2A_SACI3|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 LVGTNPR 8
+VGTNP+
Sbjct: 231 VVGTNPK 237


>sp|IF2A_SACI2|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 LVGTNPR 8
+VGTNP+
Sbjct: 231 VVGTNPK 237


>sp|IF2A_SACI1|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 LVGTNPR 8
+VGTNP+
Sbjct: 231 VVGTNPK 237


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LVGTNP 7
+VGTNP
Sbjct: 171 MVGTNP 176


>sp|NCPP_PYRCJ|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum calidifontis (strain

Query: 3 VGTNPRFE 10
VGT+P F+
Sbjct: 100 VGTSPAFQ 107




82|Sequence|406|415|NPRFEAPLFN

>sp|RS4E_SULAC|SMALL ribosomal subunit protein eS4|Sulfolobus acidocaldarius (strain

Query: 3 RFEAPLF 9
RFEAP F
Sbjct: 6 RFEAPWF 12


>sp|RS4E_SACS2|SMALL ribosomal subunit protein eS4|Saccharolobus solfataricus (strain

Query: 3 RFEAPLF 9
RFEAP F
Sbjct: 6 RFEAPWF 12


>sp|SPSS_METTH|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 RFEAPLFN 10
RFE P+F+
Sbjct: 310 RFETPVFH 317


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 RFEAPLF 9
RFE P+F
Sbjct: 241 RFEVPIF 247


>sp|RS4E_SULTO|SMALL ribosomal subunit protein eS4|Sulfurisphaera tokodaii (strain DSM

Query: 3 RFEAPLF 9
RFEAP F
Sbjct: 6 RFEAPWF 12


>sp|PGP_THEVO|PHOSPHOGLYCOLATE phosphatase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PRFEAPLF 9
P FE P+F
Sbjct: 180 PMFELPVF 187


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NPRFEAP 7
+PRFE P
Sbjct: 429 DPRFEKP 435


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PRFEAPLFN 10
P F+AP F+
Sbjct: 221 PHFDAPEFS 229


>sp|MTIP_METTH|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanothermobacter

Query: 2 PRFEAP 7
PRFE P
Sbjct: 154 PRFETP 159


>sp|MTIP_METKA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanopyrus kandleri (strain

Query: 2 PRFEAP 7
PRFE P
Sbjct: 157 PRFETP 162


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PRFEAPLF 9
P FEAP++
Sbjct: 347 PGFEAPIY 354


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 2 PRFEAPLFN 10
P F+AP F+
Sbjct: 222 PHFDAPEFS 230


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PRFEAPLF 9
P FEAP++
Sbjct: 325 PGFEAPVY 332


>sp|METE_THEKO|METHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NPRFEAP 7
NPR E+P
Sbjct: 263 NPRVESP 269




83|Sequence|411|420|APLFNARIRK

>sp|CDC61_THEAC|PUTATIVE ORC1-type DNA replication protein|Thermoplasma acidophilum (strain

Query: 1 APLFNARIRK 10
A LF+A+IRK
Sbjct: 145 AILFDAKIRK 154


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 2 PLFNARIRK 10
P FNA +RK
Sbjct: 121 PYFNAFVRK 129


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 2 PLFNARIRK 10
PL N+RI K
Sbjct: 702 PLVNSRIMK 710


>sp|COFC_METST|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PLFNAR 7
PLFN+R
Sbjct: 110 PLFNSR 115




84|Sequence|416|425|ARIRKSWLHN

>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IRKSWLHN 10
I K W+HN
Sbjct: 388 IEKVWIHN 395


>sp|ANTRA_HALVD|PROBABLE anion import ATP-binding protein|Haloferax volcanii (strain ATCC

Query: 2 RIRKSW 7
R+R+SW
Sbjct: 137 RVRRSW 142


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 5 KSWLHN 10
K+WLHN
Sbjct: 404 KTWLHN 409


>sp|Y2221_ARCFU|UNCHARACTERIZED protein AF_2221|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ARIRKSWLHN 10
+I+K W+ N
Sbjct: 261 GQIKKEWIEN 270


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 4 RKSWLH 9
+KSW H
Sbjct: 351 KKSWFH 356


>sp|Y2105_SACS2|UNCHARACTERIZED protein SSO2105|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ARIRKSWL 8
ARIRK W
Sbjct: 106 ARIRKFWF 113


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 IRKSWLH 9
+RK W+H
Sbjct: 346 VRKVWVH 352


>sp|RL37A_ARCFU|LARGE ribosomal subunit protein eL43|Archaeoglobus fulgidus (strain

Query: 2 RIRKSWL 8
R+R++WL
Sbjct: 20 RVRRTWL 26




85|Sequence|421|430|SWLHNDLKVA

>sp|GLCD1_CALMQ|GLUCOSE 1-dehydrogenase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 SWLHNDLK 8
SW H+D+K
Sbjct: 333 SWTHDDIK 340


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 2 WLHNDLKV 9
W H+D+KV
Sbjct: 334 WTHDDIKV 341


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 SWLHNDLK 8
+WLHN++K
Sbjct: 405 TWLHNEIK 412


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 SWLHNDLK 8
+W H+D+K
Sbjct: 333 TWTHDDIK 340


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 SWLHNDLKV 9
SW H DL++
Sbjct: 105 SWSHQDLEL 113


>sp|SYC_ARCFU|CYSTEINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WLHNDL 7
W+HND
Sbjct: 256 WVHNDF 261


>sp|RL39_SACS2|LARGE ribosomal subunit protein eL39|Saccharolobus solfataricus (strain

Query: 1 SWLHNDLKV 9
+W NDLKV
Sbjct: 43 NWRRNDLKV 51


>sp|RL39_SACI7|LARGE ribosomal subunit protein eL39|Saccharolobus islandicus (strain

Query: 1 SWLHNDLKV 9
+W NDLKV
Sbjct: 43 NWRRNDLKV 51


>sp|RL39_SACI6|LARGE ribosomal subunit protein eL39|Saccharolobus islandicus (strain

Query: 1 SWLHNDLKV 9
+W NDLKV
Sbjct: 43 NWRRNDLKV 51


>sp|RL39_SACI4|LARGE ribosomal subunit protein eL39|Saccharolobus islandicus (strain

Query: 1 SWLHNDLKV 9
+W NDLKV
Sbjct: 43 NWRRNDLKV 51


>sp|RL39_SACI3|LARGE ribosomal subunit protein eL39|Saccharolobus islandicus (strain

Query: 1 SWLHNDLKV 9
+W NDLKV
Sbjct: 43 NWRRNDLKV 51


>sp|RL39_SACI2|LARGE ribosomal subunit protein eL39|Saccharolobus islandicus (strain

Query: 1 SWLHNDLKV 9
+W NDLKV
Sbjct: 43 NWRRNDLKV 51


>sp|RL39_METS5|LARGE ribosomal subunit protein eL39|Metallosphaera sedula (strain ATCC

Query: 1 SWLHNDLKV 9
+W NDLKV
Sbjct: 43 NWRRNDLKV 51


>sp|RL39_SULTO|LARGE ribosomal subunit protein eL39|Sulfurisphaera tokodaii (strain

Query: 2 WLHNDLKV 9
W NDLKV
Sbjct: 44 WRRNDLKV 51


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 2 WLHNDL 7
W HNDL
Sbjct: 494 WYHNDL 499


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WLHNDLK 8
WL+ND K
Sbjct: 281 WLYNDTK 287


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 1 SWLHNDLK 8
+W+ N+LK
Sbjct: 335 TWIRNELK 342


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 1 SWLHNDLK 8
+W+ N+LK
Sbjct: 335 TWIRNELK 342


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 1 SWLHNDLK 8
+W+ N+LK
Sbjct: 335 TWIRNELK 342


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 1 SWLHNDLK 8
+W+ N+LK
Sbjct: 335 TWIRNELK 342


>sp|RL39_SACI1|LARGE ribosomal subunit protein eL39|Saccharolobus islandicus (strain

Query: 1 SWLHNDLKV 9
+W NDLKV
Sbjct: 43 NWRRNDLKV 51


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 1 SWLHNDLK 8
+W+ N+LK
Sbjct: 335 TWVRNELK 342


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SWLHNDLKV 9
+W+H D+ +
Sbjct: 318 TWIHRDIHL 326


>sp|GLMM_METM7|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C7 /

Query: 1 SWLHNDLKV 9
+W+H D+ +
Sbjct: 318 TWIHRDIHL 326


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 1 SWLHNDLKV 9
+W+H D+ +
Sbjct: 318 TWIHRDIHL 326


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SWLHNDLKV 9
+W+H D+ +
Sbjct: 322 TWIHKDIHL 330


>sp|Y748_THEPD|PROTEIN Tpen_0748|Thermofilum pendens (strain DSM 2475

Query: 1 SWLHNDLKV 9
+W H LKV
Sbjct: 180 AWRHGGLKV 188




86|Sequence|426|435|DLKVALIGSP

>sp|RL1_PICTO|LARGE ribosomal subunit protein uL1|Picrophilus torridus (strain ATCC

Query: 1 DLKVALIGS 9
DLKVALI S
Sbjct: 53 DLKVALISS 61


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LKVALIGSP 10
LKVAL+ SP
Sbjct: 612 LKVALVNSP 620


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 DLKVALIGSP 10
DLK LIG P
Sbjct: 215 DLKGVLIGGP 224


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 1 DLKVALIGSP 10
DLK LIG P
Sbjct: 215 DLKGVLIGGP 224


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 1 DLKVALIGSP 10
DLKV +G P
Sbjct: 255 DLKVVRVGHP 264


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LKVALIGSP 10
L+VAL+ SP
Sbjct: 612 LRVALVNSP 620


>sp|IF2P_THESM|PROBABLE translation initiation factor IF-2|Thermococcus sibiricus (strain

Query: 1 DLKVALIGSP 10
DL+ AL GSP
Sbjct: 315 DLEEALAGSP 324


>sp|KCY_METLZ|CYTIDYLATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DLKVALIGSP 10
DLK+ L SP
Sbjct: 92 DLKILLCASP 101


>sp|HEM1_SULAC|GLUTAMYL-TRNA reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DLKVALIGS 9
D+K+A++G+
Sbjct: 180 DIKIAIVGA 188


>sp|IDI2_THEAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LKVALIGSP 10
LK+A IG+P
Sbjct: 116 LKIANIGAP 124


>sp|NADK_PICTO|NAD kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 DLKVALIG 8
DLK+A++G
Sbjct: 210 DLKIAIVG 217


>sp|AATC_METST|A-TYPE ATP synthase subunit C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DLKVALIGSP 10
DL VAL G+P
Sbjct: 180 DLIVALEGTP 189


>sp|IF2A_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 DLKVALIGSP 10
D+K+ IG+P
Sbjct: 213 DIKIYTIGAP 222


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus

Query: 1 DLKVALIG 8
D+KV LIG
Sbjct: 68 DMKVTLIG 75


>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 2 LKVALIGSP 10
L VAL+G P
Sbjct: 661 LDVALVGEP 669


>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KVALIGSP 10
++ALIG+P
Sbjct: 5 EIALIGNP 12


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DLKVALIGS 9
D+KVAL+ S
Sbjct: 137 DMKVALLSS 145


>sp|PYRB_METST|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaera stadtmanae

Query: 1 DLKVALIG 8
+LK+AL+G
Sbjct: 155 NLKIALVG 162


>sp|PYRB_METS3|ASPARTATE carbamoyltransferase catalytic subunit|Methanobrevibacter smithii

Query: 1 DLKVALIG 8
+LK+AL+G
Sbjct: 157 NLKIALVG 164




87|Sequence|431|440|LIGSPVDLTY

>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 IGSPVDLT 9
+G PVDLT
Sbjct: 135 VGCPVDLT 142


>sp|SAT_HYPBU|SULFATE adenylyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LIGSPVDL 8
LIG P+DL
Sbjct: 150 LIGGPIDL 157


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 2 IGSPVDL 8
IG+PVDL
Sbjct: 137 IGAPVDL 143


>sp|AROE_METMP|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain DSM

Query: 1 LIGSPVDLTY 10
LIG PVD ++
Sbjct: 11 LIGHPVDHSF 20


>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 LIGSPVDLT 9
++G+PVD T
Sbjct: 285 ILGAPVDFT 293


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LIGSPVDL 8
++G+PVDL
Sbjct: 400 IMGTPVDL 407


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GSPVDLTY 10
G+P +LTY
Sbjct: 462 GAPTNLTY 469


>sp|AROE_METM7|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 1 LIGSPVDLTY 10
LIG PVD ++
Sbjct: 11 LIGHPVDHSF 20


>sp|Y663_METTH|PUTATIVE ammonium transporter MTH_663|Methanothermobacter

Query: 1 LIGSPVDL 8
IGSPV+L
Sbjct: 80 FIGSPVNL 87


>sp|QUEC_METTH|7-CYANO-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 IGSPVDLTY 10
+G P +LTY
Sbjct: 178 VGLPFELTY 186


>sp|RNH_HALSA|RIBONUCLEASE HI|Halobacterium salinarum (strain ATCC 700922

Query: 3 GSPVDLT 9
GSP D+T
Sbjct: 53 GSPTDIT 59


>sp|Y632_METJA|UNCHARACTERIZED ATP-binding protein MJ0632|Methanocaldococcus jannaschii (strain

Query: 3 GSPVDLTY 10
G P+D+ Y
Sbjct: 257 GKPIDIIY 264


>sp|METK_METHJ|S-ADENOSYLMETHIONINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 IGSPVD 7
IGSP+D
Sbjct: 345 IGSPID 350


>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GSPVDL 8
GSPVDL
Sbjct: 102 GSPVDL 107


>sp|ATGT_NATPD|TRNA-GUANINE(15) transglycosylase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 IGSPVDL 8
IG+PVD+
Sbjct: 123 IGTPVDI 129


>sp|ATGT_HALSA|TRNA-GUANINE(15) transglycosylase|Halobacterium salinarum (strain ATCC 700922

Query: 2 IGSPVDL 8
IG+PVD+
Sbjct: 123 IGTPVDI 129


>sp|ACTH_THEVO|ARCHAEAL actin homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GSPVDL 8
GSPVDL
Sbjct: 97 GSPVDL 102


>sp|ACTH_THEAC|ARCHAEAL actin homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GSPVDL 8
GSPVDL
Sbjct: 97 GSPVDL 102


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 1 LIGSPVDLTY 10
L+G VDL Y
Sbjct: 186 LLGQLVDLNY 195


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IGSPVDL 8
IG+PVD+
Sbjct: 122 IGTPVDI 128


>sp|METK_HALMA|S-ADENOSYLMETHIONINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IGSPVD 7
IGSP+D
Sbjct: 345 IGSPID 350


>sp|FEN_HALSA|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 LIGSPVDL 8
L+GSPV L
Sbjct: 181 LLGSPVTL 188


>sp|FEN_HALS3|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 LIGSPVDL 8
L+GSPV L
Sbjct: 181 LLGSPVTL 188




88|Sequence|436|445|VDLTYTYDHL

>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 1 VDLTYTYD 8
VDLT TYD
Sbjct: 244 VDLTDTYD 251


>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 1 VDLTYTYD 8
VDLT TYD
Sbjct: 238 VDLTDTYD 245


>sp|Y453_ARCFU|UNCHARACTERIZED protein AF_0453|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DLTYTYDH 9
DL+ YDH
Sbjct: 101 DLSVAYDH 108


>sp|AMPD_METMA|ANHYDROMEVALONATE phosphate decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VDLTYTYD 8
VD+T TYD
Sbjct: 243 VDITGTYD 250


>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDLTYTYD 8
VD+T TYD
Sbjct: 254 VDITGTYD 261


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 VDLTYTYDHL 10
VD+++++D+L
Sbjct: 387 VDISFSWDNL 396


>sp|MFNA_METBU|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcoides burtonii

Query: 1 VDLTYTYD 8
+D+ YTYD
Sbjct: 206 MDIDYTYD 213


>sp|AMPD_PYRHO|ANHYDROMEVALONATE phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VDLTYTYD 8
VD+T TYD
Sbjct: 246 VDITGTYD 253


>sp|ECFA_METMJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanoculleus marisnigri

Query: 1 VDLTYTYD 8
+D+ YTY+
Sbjct: 256 IDMAYTYE 263


>sp|AMPD_METJA|ANHYDROMEVALONATE phosphate decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VDLTYTYD 8
VD+T TYD
Sbjct: 239 VDITGTYD 246


>sp|AATE_METAC|A-TYPE ATP synthase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 1 VDLTYTYDHL 10
V L YTYD +
Sbjct: 156 VRLDYTYDSI 165


>sp|AATE_METBU|A-TYPE ATP synthase subunit E|Methanococcoides burtonii (strain DSM 6242

Query: 1 VDLTYTYD 8
V L YTYD
Sbjct: 156 VRLDYTYD 163


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VDLTYTY 7
+DLT+TY
Sbjct: 798 IDLTHTY 804


>sp|Y133_METTH|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 1 VDLTYTY 7
VD+ YTY
Sbjct: 9 VDIRYTY 15


>sp|PDXS_METJA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanocaldococcus jannaschii

Query: 1 VDLTYTYD 8
V+ TY YD
Sbjct: 288 VEATYNYD 295


>sp|PDXS_META3|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus aeolicus (strain

Query: 1 VDLTYTYD 8
V+ TY YD
Sbjct: 257 VEATYNYD 264


>sp|TRUA_METJA|TRNA pseudouridine synthase A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VDLTYTYDH 9
VD+ Y YD+
Sbjct: 219 VDIEYIYDN 227




89|Sequence|441|450|TYDHLGDSPK

>sp|Y099_SACS2|UPF0173 metal-dependent hydrolase SSO0099|Saccharolobus solfataricus

Query: 2 YDHLGDS 8
YDHLGD+
Sbjct: 54 YDHLGDT 60


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 2 YDHLGDS 8
YDH+GD+
Sbjct: 436 YDHVGDA 442


>sp|Y1512_SULAC|UPF0173 metal-dependent hydrolase Saci_1512|Sulfolobus acidocaldarius

Query: 2 YDHLGDS 8
YDHLGD+
Sbjct: 54 YDHLGDA 60


>sp|Y2125_METS5|UPF0173 metal-dependent hydrolase Msed_2125|Metallosphaera sedula (strain

Query: 2 YDHLGD 7
YDHLGD
Sbjct: 53 YDHLGD 58


>sp|Y1418_SULTO|UPF0173 metal-dependent hydrolase STK_14180|Sulfurisphaera tokodaii

Query: 2 YDHLGDS 8
YDHLGD+
Sbjct: 54 YDHLGDT 60


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 4 HLGDSP 9
HLGDSP
Sbjct: 346 HLGDSP 351


>sp|RS15_METS3|SMALL ribosomal subunit protein uS15|Methanobrevibacter smithii (strain

Query: 3 DHLGDSPK 10
DHL ++PK
Sbjct: 81 DHLAENPK 88


>sp|PRIS_METBF|DNA primase small subunit PriS|Methanosarcina barkeri (strain Fusaro /

Query: 3 DHLGDSPK 10
DHL D+PK
Sbjct: 102 DHLPDAPK 109


>sp|Y803_PYRIL|UPF0173 metal-dependent hydrolase Pisl_0803|Pyrobaculum islandicum

Query: 2 YDHLGDS 8
+DHLGD+
Sbjct: 53 FDHLGDA 59


>sp|Y1117_AERPE|UPF0173 metal-dependent hydrolase APE_1117|Aeropyrum pernix (strain ATCC

Query: 2 YDHLGDSPK 10
+DHLGD K
Sbjct: 52 FDHLGDVGK 60


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 2 YDHLGDSP 9
YD++ DSP
Sbjct: 201 YDYINDSP 208


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YDHLGDSPK 10
Y LGD PK
Sbjct: 10 YKPLGDQPK 18


>sp|Y3117_METAC|UPF0228 protein MA_3117|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YDHLGDSP 9
Y H GD P
Sbjct: 136 YIHFGDGP 143


>sp|RS15_METB6|SMALL ribosomal subunit protein uS15|Methanoregula boonei (strain DSM

Query: 4 HLGDSPK 10
HLG++PK
Sbjct: 101 HLGENPK 107


>sp|ADH_SULTO|NAD-DEPENDENT alcohol dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DHLGDSPK 10
+HL DSP+
Sbjct: 109 EHLCDSPR 116


>sp|ADH_SULSR|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus sp. (strain RC3)

Query: 3 DHLGDSPK 10
+HL DSP+
Sbjct: 109 EHLCDSPR 116


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DHLGDSPK 10
+HL DSP+
Sbjct: 109 EHLCDSPR 116


>sp|PGK_THEVO|PHOSPHOGLYCERATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YDHLGDSPK 10
+ HL +SPK
Sbjct: 187 FRHLNESPK 195


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 2 YDHLGDSPK 10
Y LGD PK
Sbjct: 10 YRPLGDQPK 18


>sp|NADK_METB6|NAD kinase|Methanoregula boonei (strain DSM 21154

Query: 3 DHLGDS 8
DHLGD+
Sbjct: 124 DHLGDA 129


>sp|Y810_PYRAR|UPF0173 metal-dependent hydrolase Pars_0810|Pyrobaculum arsenaticum

Query: 2 YDHLGDS 8
+DHLG+S
Sbjct: 53 FDHLGES 59


>sp|Y1074_PYRCJ|UPF0173 metal-dependent hydrolase Pcal_1074|Pyrobaculum calidifontis

Query: 2 YDHLGDS 8
+DHLG+S
Sbjct: 53 FDHLGES 59


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 YDHLGDSPK 10
Y LGD PK
Sbjct: 10 YKPLGDQPK 18


>sp|Y1348_PYRNV|UPF0173 metal-dependent hydrolase Tneu_1348|Pyrobaculum neutrophilum

Query: 2 YDHLGDS 8
+DH+GD+
Sbjct: 53 FDHMGDA 59


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 4 HLGDSP 9
HLG+SP
Sbjct: 496 HLGESP 501


>sp|Y1308_METAC|UPF0173 metal-dependent hydrolase MA_1308|Methanosarcina acetivorans

Query: 3 DHLGDS 8
DHLGD+
Sbjct: 54 DHLGDT 59


>sp|Y2300_METMA|UPF0173 metal-dependent hydrolase MM_2300|Methanosarcina mazei (strain

Query: 3 DHLGDS 8
DHLGD+
Sbjct: 54 DHLGDT 59


>sp|Y427_METAR|UPF0173 metal-dependent hydrolase UNCMA_04270|Methanocella arvoryzae

Query: 3 DHLGDS 8
DHLGD+
Sbjct: 54 DHLGDT 59


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 1 TYDHLGDS 8
TYD LGD+
Sbjct: 456 TYDPLGDN 463


>sp|Y1542_METKA|UPF0173 metal-dependent hydrolase MK1542|Methanopyrus kandleri (strain

Query: 3 DHLGDS 8
DHLGD+
Sbjct: 52 DHLGDA 57


>sp|Y1902_METTH|UPF0173 metal-dependent hydrolase MTH_1902|Methanothermobacter

Query: 3 DHLGDS 8
DHLGD+
Sbjct: 52 DHLGDA 57


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YDHLGDSP 9
Y +LGD+P
Sbjct: 1522 YAYLGDNP 1529


Query: 2 YDHLGDSP 9
Y +LGD+P
Sbjct: 1855 YAYLGDNP 1862


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 TYDHLGDSP 9
TY +GD P
Sbjct: 56 TYSFIGDPP 64


>sp|DLD_ARCFU|D-LACTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TYDHLGD 7
TY H GD
Sbjct: 355 TYGHAGD 361


>sp|Y1265_ARCFU|UPF0173 metal-dependent hydrolase AF_1265|Archaeoglobus fulgidus (strain

Query: 3 DHLGDS 8
DHLGD+
Sbjct: 51 DHLGDA 56


>sp|Y779_METS3|UPF0173 metal-dependent hydrolase Msm_0779|Methanobrevibacter smithii

Query: 3 DHLGDS 8
DHLGD+
Sbjct: 53 DHLGDA 58


>sp|Y1671_PYRHO|UPF0173 metal-dependent hydrolase PH1671|Pyrococcus horikoshii (strain

Query: 3 DHLGDS 8
DHLGD+
Sbjct: 53 DHLGDA 58


>sp|Y3716_METBF|UPF0173 metal-dependent hydrolase Mbar_A3716|Methanosarcina barkeri

Query: 3 DHLGDS 8
DHLGD+
Sbjct: 54 DHLGDT 59




90|Sequence|446|455|GDSPKILQDI

>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 2 DSPKILQD 9
DSP ++QD
Sbjct: 341 DSPPVIQD 348


>sp|AROA_METKA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 GDSPKILQDI 10
GDSP+ +D+
Sbjct: 80 GDSPRAPEDV 89


>sp|RLMH_METLZ|PUTATIVE ribosomal RNA large subunit|Methanocorpusculum labreanum (strain

Query: 1 GDSPKILQDI 10
G SPK+LQ +
Sbjct: 111 GLSPKLLQSV 120


>sp|MOAA_METVS|PROBABLE GTP 3',8-cyclase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DSPKILQDI 10
D PKI+Q+I
Sbjct: 72 DLPKIIQNI 80


>sp|DMD_SACS2|DIPHOSPHOMEVALONATE decarboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GDSPKIL 7
GD PK+L
Sbjct: 316 GDGPKVL 322


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 2 DSPKILQD 9
DSPK+L +
Sbjct: 598 DSPKVLDN 605


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 1 GDSPKIL 7
GD+PKI+
Sbjct: 381 GDAPKIV 387


>sp|PXPA_PYRAB|5-OXOPROLINASE subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 GDSPKILQ 8
GD+PK L+
Sbjct: 224 GDNPKALE 231




91|Sequence|451|460|ILQDIASGSH

>sp|Y1211_METTH|PUTATIVE transport protein MTH_1211|Methanothermobacter thermautotrophicus

Query: 1 ILQDIASGS 9
+L+DI SGS
Sbjct: 120 VLRDILSGS 128




92|Sequence|456|465|ASGSHPFSQV

>sp|THII_METAC|PROBABLE tRNA sulfurtransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 SGSHPFS 8
SG+HPFS
Sbjct: 135 SGNHPFS 141


>sp|UBIX_PYRHO|FLAVIN prenyltransferase UbiX|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ASGSHPF 7
ASGS+PF
Sbjct: 64 ASGSYPF 70


>sp|UBIX_PYRAB|FLAVIN prenyltransferase UbiX|Pyrococcus abyssi (strain GE5 /

Query: 1 ASGSHPF 7
ASGS+PF
Sbjct: 64 ASGSYPF 70


>sp|FOLD_METBU|BIFUNCTIONAL protein FolD|Methanococcoides burtonii (strain DSM 6242

Query: 1 ASGSHPFS 8
A G HPF+
Sbjct: 124 ADGFHPFN 131




93|Sequence|461|470|PFSQVLKEAK

>sp|ASPGP_PYRCJ|PLANT-TYPE L-asparaginase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 FSQVLKEAK 10
FSQVL+EA+
Sbjct: 146 FSQVLEEAR 154


>sp|MCH_METAR|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PFSQVLKEAK 10
PF V KEAK
Sbjct: 263 PFYTVFKEAK 272


>sp|MCH_METVS|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PFSQVLKEA 9
PF +V KEA
Sbjct: 268 PFLEVFKEA 276


>sp|MCH_METBF|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PFSQVLKEA 9
PF Q KEA
Sbjct: 266 PFYQTFKEA 274


>sp|MCH_METLZ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PFSQVLKEA 9
PF+ + KEA
Sbjct: 261 PFNDIFKEA 269


>sp|MCH_METB6|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoregula boonei (strain DSM 21154

Query: 1 PFSQVLKEA 9
PF+ + KEA
Sbjct: 261 PFNDIFKEA 269


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PFSQVLKEA 9
PF +V+KEA
Sbjct: 105 PFVRVMKEA 113


>sp|MCH_METM7|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 1 PFSQVLKEA 9
PF +V KEA
Sbjct: 268 PFLEVFKEA 276


>sp|TRPA_AERPE|TRYPTOPHAN synthase alpha chain|Aeropyrum pernix (strain ATCC 700893

Query: 2 FSQVLKEA 9
FS+VL+EA
Sbjct: 97 FSEVLREA 104


>sp|MCH_METHJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PFSQVLKEA 9
PF ++ KEA
Sbjct: 262 PFYEIFKEA 270


>sp|HJA1_METJA|PROBABLE archaeal histone 1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PFSQVLKEA 9
PF ++LK+A
Sbjct: 8 PFERILKKA 16


>sp|MCH_METS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PFSQVLKEAK 10
PF V KEA+
Sbjct: 269 PFFDVFKEAE 278


>sp|HJA2_METJA|PROBABLE archaeal histone 2|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PFSQVLKEA 9
PF ++LK+A
Sbjct: 8 PFERILKKA 16




94|Sequence|466|475|LKEAKKPMVV

>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 LKEAKKPMVV 10
LKEAK+P+V+
Sbjct: 123 LKEAKQPIVL 132


>sp|RFCL_HALMA|REPLICATION factor C large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 LKEAKKPMVV 10
+KEA +PM++
Sbjct: 125 VKEASQPMIL 134


>sp|HPCAL_NITMS|3-HYDROXYPROPIONATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LKEAKKPMVV 10
+KE KKP+V+
Sbjct: 478 MKEKKKPIVI 487


>sp|Y1223_PYRHO|UNCHARACTERIZED ZPR1-like protein PH1223|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LKEAKKPMVV 10
+KE KKP+ V
Sbjct: 169 VKEGKKPLTV 178


>sp|PYRDB_THEVO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma volcanium

Query: 2 KEAKKPMV 9
KEAK+P++
Sbjct: 89 KEAKRPII 96


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 1 LKEAKKPMVV 10
+KE++ PMV+
Sbjct: 124 IKESRHPMVL 133


>sp|SUCC_METJA|SUCCINATE--COA ligase [ADP-forming] subunit beta|Methanocaldococcus jannaschii

Query: 2 KEAKKPMVV 10
++AKKP+++
Sbjct: 106 RDAKKPLII 114


>sp|CPGS_THESM|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus sibiricus (strain

Query: 1 LKEAKKPMVV 10
LKE KP++V
Sbjct: 143 LKEISKPIIV 152


>sp|CPGS_THEKO|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus kodakarensis (strain

Query: 1 LKEAKKPMVV 10
LKE +P+VV
Sbjct: 143 LKEVARPVVV 152


>sp|APGM_METM7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C7 /

Query: 1 LKEAKKPMV 9
LKEAK P++
Sbjct: 23 LKEAKTPIM 31


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 1 LKEAKKPMVV 10
LKE KP++V
Sbjct: 143 LKEIAKPVIV 152




95|Sequence|471|480|KPMVVLGSSA

>sp|THS2_HALVD|CHAPERONIN subunit CTT2|Haloferax volcanii (strain ATCC 29605

Query: 1 KPMVVLGSSA 10
+PM+++G A
Sbjct: 9 QPMIIMGEDA 18


>sp|THSB_HALSA|THERMOSOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 1 KPMVVLGSSA 10
+PM+++G A
Sbjct: 10 QPMIIMGDDA 19


>sp|CHEB_NATPD|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Natronomonas pharaonis

Query: 1 KPMVVLGSS 9
KP +V+GSS
Sbjct: 165 KPTLVIGSS 173


>sp|NADK_PYRHO|NAD kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PMVVLGSS 9
PMV+ GSS
Sbjct: 210 PMVIPGSS 217


>sp|THS1_HALVD|CHAPERONIN subunit CTT1|Haloferax volcanii (strain ATCC 29605

Query: 1 KPMVVLGSSA 10
+PM++LG +
Sbjct: 9 QPMIILGEDS 18


>sp|NADK_PYRFU|NAD kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PMVVLGSS 9
PMV+ GSS
Sbjct: 210 PMVIPGSS 217




96|Sequence|476|485|LGSSALQRND

>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LGSSALQRND 10
LG SAL ND
Sbjct: 392 LGLSALTEND 401


>sp|ENDAL_METKA|ENDA-LIKE protein|Methanopyrus kandleri (strain AV19 /

Query: 1 LGSSALQRND 10
+GS L RND
Sbjct: 8 VGSKVLVRND 17




97|Sequence|481|490|LQRNDGAAIL

>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 4 NDGAAIL 10
NDGAAI+
Sbjct: 261 NDGAAIM 267


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 RNDGAAIL 10
R DGAAI+
Sbjct: 36 RRDGAAIV 43


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LQRNDGAA 8
++RNDG+A
Sbjct: 636 VERNDGSA 643




98|Sequence|486|495|GAAILAAVSS

>sp|YPZ4_METTF|UNCHARACTERIZED protein ORF4'|Methanothermobacter thermautotrophicus

Query: 1 GAAILAAVSS 10
GAA+L+ VSS
Sbjct: 74 GAAMLSGVSS 83


>sp|YPV4_METTF|UNCHARACTERIZED protein ORF4|Methanothermobacter thermautotrophicus

Query: 1 GAAILAAVSS 10
GAA+L+ VSS
Sbjct: 74 GAAMLSGVSS 83


>sp|CSG_METSC|CELL surface glycoprotein|Methanothermus sociabilis

Query: 1 GAAILAAVSS 10
G+AI+ AVSS
Sbjct: 75 GSAIINAVSS 84


>sp|CSG_METFV|CELL surface glycoprotein|Methanothermus fervidus (strain ATCC 43054

Query: 1 GAAILAAVSS 10
G+AI+ AVSS
Sbjct: 75 GSAIINAVSS 84




99|Sequence|491|500|AAVSSIAQKI

***** No hits found ******


100|Sequence|496|505|IAQKIRMTSG

***** No hits found ******


101|Sequence|501|510|RMTSGVTGDW

>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TSGVTGDW 10
TSG+ DW
Sbjct: 1157 TSGIIDDW 1164


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 RMTSGVTGDW 10
R+T + GDW
Sbjct: 197 RVTLSLEGDW 206


>sp|SPSS1_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanoregula boonei (strain DSM 21154

Query: 3 TSGVTGD 9
T+G+TGD
Sbjct: 240 TTGITGD 246


>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 3 TSGVTGD 9
TSGVTG+
Sbjct: 202 TSGVTGE 208


>sp|NNR_METHJ|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanospirillum hungatei JF-1

Query: 2 MTSGVTGD 9
MT+G TGD
Sbjct: 410 MTTGGTGD 417


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 MTSGVTGDW 10
+TSG+ G W
Sbjct: 302 ITSGIEGPW 310


>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 2 MTSGVTGDW 10
+TSG+ G W
Sbjct: 292 ITSGIEGPW 300


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 2 MTSGVTGDW 10
+TSG+ G W
Sbjct: 292 ITSGIEGPW 300


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 MTSGVTGDW 10
+TSG+ G W
Sbjct: 303 ITSGIEGPW 311


>sp|RL6_PICTO|LARGE ribosomal subunit protein uL6|Picrophilus torridus (strain ATCC

Query: 1 RMTSGVTGDW 10
+ T G+ G W
Sbjct: 61 KYTKGIVGTW 70


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 2 MTSGVTGDW 10
+TSG+ G W
Sbjct: 285 ITSGIEGPW 293


>sp|PYRC_HALSA|DIHYDROOROTASE salinarum (strain ATCC 700922

Query: 2 MTSGVTGDW 10
+ GVTG+W
Sbjct: 115 VNGGVTGEW 123




102|Sequence|506|515|VTGDWKVMNI

>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 3 GDWKVMNI 10
GD KVMNI
Sbjct: 471 GDVKVMNI 478


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VTGDWKVM 8
+TGDW V+
Sbjct: 636 ITGDWSVV 643


>sp|ARCS_HALVD|ARCHAEOSINE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 VTGDW 5
VTGDW
Sbjct: 359 VTGDW 363


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 3 GDWKVMN 9
GDW VM+
Sbjct: 103 GDWIVMD 109


>sp|DHQS_METMJ|3-DEHYDROQUINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TGDWKVM 8
TGDW V+
Sbjct: 83 TGDWTVI 89


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 WKVMNI 10
WK++NI
Sbjct: 223 WKILNI 228


>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC

Query: 1 VTGDW 5
+TGDW
Sbjct: 19 ITGDW 23


>sp|DHQS_METPE|3-DEHYDROQUINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 TGDWKVM 8
TGDW V+
Sbjct: 83 TGDWTVI 89


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 VTGDW 5
+TGDW
Sbjct: 154 ITGDW 158


>sp|K1PF_HALVD|1-PHOSPHOFRUCTOKINASE volcanii (strain ATCC 29605

Query: 3 GDWKV 7
GDWK+
Sbjct: 152 GDWKI 156


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 TGDWK 6
TGDW+
Sbjct: 313 TGDWR 317


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VTGDWKVMN 9
V GDW V++
Sbjct: 536 VIGDWIVLD 544


>sp|VORD_PYRHO|KETOISOVALERATE oxidoreductase subunit VorD|Pyrococcus horikoshii (strain ATCC

Query: 2 TGDWK 6
TGDW+
Sbjct: 38 TGDWR 42


>sp|VORD_PYRAB|KETOISOVALERATE oxidoreductase subunit VorD|Pyrococcus abyssi (strain GE5 /

Query: 2 TGDWK 6
TGDW+
Sbjct: 38 TGDWR 42


>sp|SYFA_METVS|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 VTGDWKVMNI 10
V+G WK ++I
Sbjct: 207 VSGKWKEVSI 216


>sp|BAST_HALS3|TRANSDUCER protein BasT|Halobacterium salinarum (strain ATCC 29341

Query: 2 TGDWKVMN 9
TGD KV+N
Sbjct: 203 TGDVKVVN 210


>sp|IF2A_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 1 VTGDWK 6
+ GDWK
Sbjct: 152 INGDWK 157


>sp|CSG_HALVD|CELL surface glycoprotein|Haloferax volcanii (strain ATCC 29605

Query: 3 GDWKVMNI 10
GDW+++ I
Sbjct: 421 GDWQLLEI 428


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 WKVMN 9
WKVMN
Sbjct: 403 WKVMN 407




103|Sequence|511|520|KVMNILHRIA

>sp|Y1080_METJA|UNCHARACTERIZED protein MJ1080|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVMNILHRI 9
K+MNI H+I
Sbjct: 4 KIMNIKHKI 12


>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KVMNILHRIA 10
+VMN LH I
Sbjct: 335 RVMNDLHEIG 344


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 NILHRI 9
NILHR+
Sbjct: 312 NILHRV 317




104|Sequence|516|525|LHRIASQVAA

>sp|TLDD_SACS2|ZINC metalloprotease TldD homolog|Saccharolobus solfataricus (strain

Query: 1 LHRIASQV 8
LH++ASQV
Sbjct: 110 LHKVASQV 117


>sp|RL13_NATPD|LARGE ribosomal subunit protein uL13|Natronomonas pharaonis (strain

Query: 1 LHRIASQVA 9
L R+ASQVA
Sbjct: 19 LGRVASQVA 27




105|Sequence|521|530|SQVAALDLGY

>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QVAALDLGY 10
QVA L LGY
Sbjct: 159 QVAILTLGY 167


>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QVAALDLGY 10
QVA L LGY
Sbjct: 156 QVAILTLGY 164


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 5 ALDLGY 10
ALDLGY
Sbjct: 370 ALDLGY 375


>sp|MPGP_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 5 ALDLGY 10
ALDLGY
Sbjct: 35 ALDLGY 40




106|Sequence|526|535|LDLGYKPGVE

>sp|RADA_METMP|DNA repair and recombination protein|Methanococcus maripaludis

Query: 2 DLGYKPGVE 10
DLG+K GVE
Sbjct: 61 DLGFKSGVE 69


>sp|RADA_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 2 DLGYKPGVE 10
DLG+K GVE
Sbjct: 61 DLGFKSGVE 69


>sp|RADA_METM6|DNA repair and recombination protein|Methanococcus maripaludis

Query: 2 DLGYKPGVE 10
DLG+K GVE
Sbjct: 61 DLGFKSGVE 69


>sp|RADA_METM5|DNA repair and recombination protein|Methanococcus maripaludis

Query: 2 DLGYKPGVE 10
DLG+K GVE
Sbjct: 61 DLGFKSGVE 69


>sp|RADA_METM7|DNA repair and recombination protein|Methanococcus maripaludis

Query: 2 DLGYKPGVE 10
DLG+K GVE
Sbjct: 61 DLGFKSGVE 69


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 DLGYKPGVE 10
+LGY+PGV+
Sbjct: 365 ELGYRPGVD 373


>sp|AROE_CALMQ|SHIKIMATE dehydrogenase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 1 LDLGYKPGVE 10
LD+ YKP E
Sbjct: 206 LDMAYKPNTE 215


>sp|TF2B4_HALSA|TRANSCRIPTION initiation factor IIB 4|Halobacterium salinarum (strain ATCC 700922

Query: 1 LDLGYKPGVE 10
LD G +PGVE
Sbjct: 318 LDAGGEPGVE 327


>sp|YHMF_METFE|UNCHARACTERIZED 32.2 kDa protein in|Methanothermus fervidus

Query: 1 LDLGYKPGV 9
LD GY PGV
Sbjct: 218 LDPGYAPGV 226


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DLGYKPGVE 10
++GY PGVE
Sbjct: 297 EMGYCPGVE 305


>sp|COBD_THEVO|PROBABLE cobalamin biosynthesis protein CobD|Thermoplasma volcanium (strain

Query: 2 DLGYKPGV 9
D GY+PGV
Sbjct: 264 DDGYQPGV 271


>sp|RADA_METVO|DNA repair and recombination protein|Methanococcus voltae

Query: 2 DLGYKPGVE 10
DLG+K G++
Sbjct: 61 DLGFKSGID 69


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 3 LGYKPGVE 10
LGY PGV+
Sbjct: 361 LGYIPGVD 368


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 LDLGYKPG 8
LD G KPG
Sbjct: 401 LDFGRKPG 408


>sp|OTC_METMA|ORNITHINE carbamoyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GYKPGVE 10
GY+PG E
Sbjct: 184 GYEPGAE 190


>sp|MFNA_ARCFU|PROBABLE L-aspartate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DLGYKPGVE 10
DLG++P +E
Sbjct: 297 DLGFEPVIE 305


>sp|PSB2_PYRAE|PROTEASOME subunit beta 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LDLGYKPGV 9
LD GY+P +
Sbjct: 147 LDTGYRPDI 155


>sp|ENO_PYRAB|ENOLASE abyssi (strain GE5 /

Query: 2 DLGYKPGVE 10
+ GYKPG E
Sbjct: 231 EAGYKPGEE 239


>sp|ENO_PYRHO|ENOLASE horikoshii (strain ATCC 700860

Query: 2 DLGYKPGVE 10
+ GYKPG E
Sbjct: 231 EAGYKPGDE 239


>sp|ASPD_METVS|L-ASPARTATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LDLGYKP 7
LDLG KP
Sbjct: 158 LDLGLKP 164


>sp|G3P_METMJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DLGYKPGVE 10
DLG KP E
Sbjct: 54 DLGKKPAFE 62


>sp|RLME_ARCFU|RIBOSOMAL RNA large subunit methyltransferase|Archaeoglobus fulgidus

Query: 1 LDLGYKPG 8
LDLG PG
Sbjct: 42 LDLGATPG 49


>sp|Y3532_METJA|UNCHARACTERIZED protein MJECL32|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DLGYKP 7
DLGY+P
Sbjct: 73 DLGYRP 78


>sp|TRPF_PYRAE|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 YKPGVE 10
YKPG+E
Sbjct: 105 YKPGIE 110


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LDLGYKPG 8
LD G KPG
Sbjct: 170 LDTGAKPG 177


>sp|RLME_CENSY|RIBOSOMAL RNA large subunit methyltransferase|Cenarchaeum symbiosum (strain

Query: 1 LDLGYKPG 8
LDLG PG
Sbjct: 45 LDLGCAPG 52


>sp|RLME_METHJ|RIBOSOMAL RNA large subunit methyltransferase|Methanospirillum hungatei

Query: 1 LDLGYKPG 8
LDLG PG
Sbjct: 44 LDLGAAPG 51


>sp|ENO_PYRFU|ENOLASE furiosus (strain ATCC 43587

Query: 2 DLGYKPGVE 10
+ GYKPG E
Sbjct: 231 EAGYKPGDE 239


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 4 GYKPGV 9
G+KPGV
Sbjct: 304 GFKPGV 309


>sp|PORC_METJA|PYRUVATE synthase subunit PorC|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LDLGYK 6
LDLGYK
Sbjct: 102 LDLGYK 107


>sp|ENO_THEON|ENOLASE onnurineus (strain NA1)

Query: 2 DLGYKPGVE 10
+ GYKPG E
Sbjct: 231 EAGYKPGDE 239


>sp|ENO_THEKO|ENOLASE kodakarensis (strain ATCC BAA-918

Query: 2 DLGYKPGVE 10
+ GYKPG E
Sbjct: 231 EAGYKPGDE 239


>sp|ASPD_METJA|L-ASPARTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DLGYKP 7
+LGYKP
Sbjct: 159 NLGYKP 164


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC

Query: 2 DLGYKP 7
+LGYKP
Sbjct: 46 ELGYKP 51


>sp|ENO_THEGJ|ENOLASE gammatolerans (strain DSM 15229

Query: 2 DLGYKPGVE 10
+ GYKPG E
Sbjct: 231 EAGYKPGDE 239


>sp|HPCAS_METS5|3-HYDROXYPROPIONYL-COENZYME A synthetase|Metallosphaera sedula (strain ATCC 51363

Query: 2 DLGYKPGV 9
+LGY PG+
Sbjct: 426 NLGYLPGI 433


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 3 LGYKPGVE 10
LGY PG+E
Sbjct: 389 LGYLPGLE 396


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 GYKPG 8
GYKPG
Sbjct: 229 GYKPG 233


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC

Query: 1 LDLGYKPG 8
+DL Y+PG
Sbjct: 15 VDLNYEPG 22


>sp|MFNB_METMA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DLGYKPGV 9
D YKPG
Sbjct: 61 DFNYKPGT 68


>sp|MFNB_METBF|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DLGYKPGV 9
D YKPG
Sbjct: 61 DFNYKPGT 68


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 1 LDLGYKPGVE 10
LD+ YK G+E
Sbjct: 318 LDVLYKTGIE 327


>sp|MFNB_METAC|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DLGYKPG 8
D YKPG
Sbjct: 61 DFNYKPG 67


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 LDLGYKPG 8
+DL Y+PG
Sbjct: 14 VDLNYEPG 21


>sp|SUCC_PYRIL|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum islandicum (strain

Query: 3 LGYKPG 8
LG+KPG
Sbjct: 159 LGFKPG 164


>sp|MER_ARCFU|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LGYKPG 8
LG+KPG
Sbjct: 144 LGFKPG 149


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 2 DLGYKPGV 9
D+G +PGV
Sbjct: 113 DVGIEPGV 120


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDLGYKPGVE 10
+DLG KP ++
Sbjct: 353 MDLGLKPKLD 362


>sp|ENO_AERPE|ENOLASE pernix (strain ATCC 700893

Query: 4 GYKPGVE 10
GY+PG E
Sbjct: 235 GYQPGSE 241


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 1 LDLGYKP 7
LDLGY P
Sbjct: 371 LDLGYIP 377


>sp|ILVC_CALMQ|KETOL-ACID reductoisomerase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 1 LDLGYKPGV 9
++LGY+P V
Sbjct: 214 IELGYQPEV 222


>sp|GATD_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Halobacterium salinarum (strain ATCC

Query: 1 LDLGYKPGVE 10
LD GY GV+
Sbjct: 35 LDSGYNVGVD 44


>sp|GATD_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Halobacterium salinarum (strain ATCC

Query: 1 LDLGYKPGVE 10
LD GY GV+
Sbjct: 35 LDSGYNVGVD 44


>sp|RBL_METMA|RIBULOSE bisphosphate carboxylase|Methanosarcina mazei (strain ATCC

Query: 1 LDLGYKP 7
+D+GY P
Sbjct: 6 IDIGYSP 12


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 2 DLGYKPGVE 10
DLG +PG++
Sbjct: 366 DLGCEPGLK 374


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DLGYKPGVE 10
+LG PGVE
Sbjct: 342 ELGELPGVE 350


>sp|RLME_METTH|RIBOSOMAL RNA large subunit methyltransferase|Methanothermobacter

Query: 1 LDLGYKPG 8
LDLG PG
Sbjct: 48 LDLGAAPG 55


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LDLGYK 6
+DLGYK
Sbjct: 73 IDLGYK 78




107|Sequence|531|540|KPGVEAIRKN

>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 KPGVEAIRK 9
KPG E+IR+
Sbjct: 19 KPGTESIRR 27


>sp|AGLM_HALVD|UDP-GLUCOSE 6-dehydrogenase AglM|Haloferax volcanii (strain ATCC 29605

Query: 1 KPGVEAIRKN 10
KPG + IRK+
Sbjct: 328 KPGTDDIRKS 337


>sp|PYRDB_METTH|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanothermobacter

Query: 2 PGVEAIRK 9
PGVEA R+
Sbjct: 77 PGVEAFRE 84


>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KPGVEAI 7
KPGVEA+
Sbjct: 350 KPGVEAL 356


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KPGVEAIRK 9
KP VEAI K
Sbjct: 283 KPNVEAIEK 291


>sp|PUR2_THEKO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KPGVEAIRKN 10
K VEA+RKN
Sbjct: 253 KATVEAMRKN 262


>sp|LEU3_HALVD|3-ISOPROPYLMALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 2 PGVEAIR 8
PGV+A+R
Sbjct: 97 PGVDALR 103


>sp|HEMH_THEVO|FERROCHELATASE volcanium (strain ATCC 51530

Query: 1 KPGVEAIRKN 10
KP EA+ KN
Sbjct: 119 KPLAEALEKN 128


>sp|FRHB_METBF|COENZYME F420 hydrogenase subunit beta|Methanosarcina barkeri (strain Fusaro

Query: 1 KPGVEAIRK 9
KPG++ +RK
Sbjct: 253 KPGLDLLRK 261


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PGVEAIR 8
PGVEA++
Sbjct: 398 PGVEALK 404


>sp|RL30_THEAC|LARGE ribosomal subunit protein uL30|Thermoplasma acidophilum (strain

Query: 1 KPGVEAIRK 9
K G EAIRK
Sbjct: 122 KGGYEAIRK 130


>sp|KITH_PYRAE|THYMIDINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KPGVEAIRK 9
K GVE IRK
Sbjct: 64 KDGVEIIRK 72




108|Sequence|536|545|AIRKNPPKVL

>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IRKNPPKVL 10
I++NPPKV+
Sbjct: 160 IKENPPKVI 168


>sp|MCT_HALMA|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IRKNPPKV 9
IR NPP V
Sbjct: 43 IRSNPPFV 50


>sp|MCT_HALHT|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula hispanica (strain ATCC 33960

Query: 2 IRKNPPKV 9
IR NPP V
Sbjct: 43 IRSNPPFV 50


>sp|NPPNK_METJA|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanocaldococcus jannaschii (strain

Query: 2 IRKNPPKVL 10
I KNP K+L
Sbjct: 441 ITKNPAKIL 449


>sp|G3P_METS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 AIRKNPPKV 9
+I NPPKV
Sbjct: 183 SIVPNPPKV 191


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IRKNPPKV 9
++ NPPKV
Sbjct: 137 VKYNPPKV 144


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 IRKNPPKVL 10
+R PPK+L
Sbjct: 343 VRFQPPKIL 351


>sp|G3P_METFE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermus fervidus

Query: 1 AIRKNPPKV 9
AI NPPK+
Sbjct: 182 AIIPNPPKL 190




109|Sequence|541|550|PPKVLFLLGA

>sp|CDC6A_HALMA|ORC1-TYPE DNA replication protein 1|Haloarcula marismortui (strain ATCC

Query: 1 PPKVLFLLG 9
PPK LFL G
Sbjct: 50 PPKNLFLYG 58


>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PPKVLFLLGA 10
PP+V F+L A
Sbjct: 53 PPRVAFMLDA 62


>sp|KADA_SACS2|ADENYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PKVLFLLGA 10
PKV+FLL A
Sbjct: 117 PKVIFLLEA 125


>sp|KADA_SACI7|ADENYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PKVLFLLGA 10
PKV+FLL A
Sbjct: 117 PKVIFLLEA 125


>sp|KADA_SACI6|ADENYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PKVLFLLGA 10
PKV+FLL A
Sbjct: 117 PKVIFLLEA 125


>sp|KADA_SACI4|ADENYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PKVLFLLGA 10
PKV+FLL A
Sbjct: 117 PKVIFLLEA 125


>sp|KADA_SACI3|ADENYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PKVLFLLGA 10
PKV+FLL A
Sbjct: 117 PKVIFLLEA 125


>sp|KADA_SACI2|ADENYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PKVLFLLGA 10
PKV+FLL A
Sbjct: 117 PKVIFLLEA 125


>sp|KADA_SACI1|ADENYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PKVLFLLGA 10
PKV+FLL A
Sbjct: 117 PKVIFLLEA 125


>sp|KADA_SULTO|ADENYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PKVLFLLGA 10
P+V+FLL A
Sbjct: 116 PRVIFLLEA 124


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 PPKVLFLLG 9
PP +LF +G
Sbjct: 608 PPHILFPVG 616


>sp|SPEE_SACS2|POLYAMINE aminopropyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 PPKVLFLLGA 10
PPK + +LG
Sbjct: 78 PPKSVLILGG 87


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 PPKVLFLLG 9
PP VLF +G
Sbjct: 707 PPHVLFPIG 715


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 PPKVLFLLGA 10
PP VLF G+
Sbjct: 586 PPHVLFPTGS 595


>sp|TRMY_ARCFU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Archaeoglobus fulgidus

Query: 1 PPKVLFLLG 9
PP LF++G
Sbjct: 234 PPNPLFVIG 242


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 PPKVLFLLGA 10
PPK +LGA
Sbjct: 169 PPKTALVLGA 178


>sp|PURE_METSM|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanobrevibacter

Query: 2 PKVLFLLGA 10
PKV+ +LG+
Sbjct: 3 PKVMIILGS 11


>sp|KHSE_PYRCJ|HOMOSERINE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PKVLFLLG 9
PK+LF++G
Sbjct: 155 PKLLFVVG 162




110|Sequence|546|555|FLLGADGGCI

>sp|HEM3_METAR|PROBABLE porphobilinogen deaminase|Methanocella arvoryzae (strain DSM 22066

Query: 4 GADGGCI 10
G DGGC+
Sbjct: 228 GLDGGCV 234


>sp|DAPAL_PYRAB|UNCHARACTERIZED DapA-like lyase PYRAB12600|Pyrococcus abyssi (strain GE5 /

Query: 1 FLLGADGG 8
LLG DGG
Sbjct: 194 LLLGGDGG 201


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LGADGGC 9
+GAD GC
Sbjct: 83 VGADAGC 89


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 LGADGGC 9
+GAD GC
Sbjct: 83 VGADAGC 89


>sp|G1PDH_METTP|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothrix thermoacetophila (strain DSM

Query: 1 FLLGADGG 8
FL+GA GG
Sbjct: 95 FLIGAGGG 102


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 GADGGC 9
GAD GC
Sbjct: 81 GADAGC 86


>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 4 GADGGCI 10
GA+G CI
Sbjct: 454 GAEGACI 460


>sp|Y1602_METBF|UNCHARACTERIZED protein Mbar_A1602|Methanosarcina barkeri (strain Fusaro /

Query: 1 FLLGADG 7
+L+GADG
Sbjct: 144 YLIGADG 150


>sp|VORB_METTH|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter thermautotrophicus

Query: 5 ADGGC 9
ADGGC
Sbjct: 294 ADGGC 298


>sp|HTPX_PYRHO|PROTEASE HtpX homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FLLGADGGCI 10
+LLG GG I
Sbjct: 25 YLLGGTGGMI 34


>sp|G1PDH_METAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocella arvoryzae (strain DSM 22066

Query: 1 FLLGADGG 8
FLLG GG
Sbjct: 84 FLLGVGGG 91


>sp|G1PDH_HALMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloarcula marismortui (strain ATCC 43049

Query: 1 FLLGADGG 8
FLLG GG
Sbjct: 91 FLLGVGGG 98


>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 6 DGGCI 10
DGGCI
Sbjct: 200 DGGCI 204


>sp|RL3_METH6|LARGE ribosomal subunit protein uL3|Methanothrix harundinacea (strain

Query: 3 LGADGGCI 10
+G+DGG I
Sbjct: 268 IGSDGGAI 275


>sp|DAPAL_THEON|UNCHARACTERIZED DapA-like lyase TON_0506|Thermococcus onnurineus (strain NA1)

Query: 1 FLLGADGG 8
+LG DGG
Sbjct: 196 LILGGDGG 203


>sp|DAPAL_THEKO|UNCHARACTERIZED DapA-like lyase TK1237|Thermococcus kodakarensis (strain ATCC

Query: 1 FLLGADGG 8
+LG DGG
Sbjct: 196 LILGGDGG 203


>sp|DAPAL_PYRHO|UNCHARACTERIZED DapA-like lyase PH0847|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FLLGADGG 8
+LG DGG
Sbjct: 194 LILGGDGG 201


>sp|RPIA_METJA|RIBOSE-5-PHOSPHATE isomerase A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLLGADGGC 9
FL+ GGC
Sbjct: 94 FLIKGGGGC 102


>sp|LYSZ_PYRCJ|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 2 LLGADGGCI 10
L GADGG +
Sbjct: 97 LTGADGGVV 105


>sp|Y1096_ARCFU|UNCHARACTERIZED protein AF_1096|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LGADGGC 9
LG+ GGC
Sbjct: 90 LGSSGGC 96


>sp|HTPX_PYRFU|PROTEASE HtpX homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FLLGADGGCI 10
+L+G GG I
Sbjct: 25 YLIGGQGGMI 34


>sp|PGP_METTH|PHOSPHOGLYCOLATE phosphatase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LLGADGGCI 10
L+GA GG +
Sbjct: 54 LIGASGGVV 62


>sp|LYSZ_SACI1|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LLGADGGCI 10
+ GADGG +
Sbjct: 97 ITGADGGLL 105




111|Sequence|551|560|DGGCITRQDL

>sp|NCPP_AERPE|PROBABLE inosine/xanthosine triphosphatase|Aeropyrum pernix (strain ATCC

Query: 3 GCITRQDL 10
G +TRQDL
Sbjct: 149 GAVTRQDL 156


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GGCITRQ 8
GGC TR+
Sbjct: 350 GGCFTRE 356


>sp|LIPA_METAR|LIPOYL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DGGCIT 6
DGGC+T
Sbjct: 51 DGGCLT 56


>sp|Y374_METJA|UNCHARACTERIZED protein MJ0374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GCITRQDL 10
GC+TR D+
Sbjct: 316 GCLTRIDI 323


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GGCITRQD 9
GGCIT ++
Sbjct: 404 GGCITLEE 411


>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 1 DGGCI 5
DGGCI
Sbjct: 200 DGGCI 204


>sp|SYW_METAC|TRYPTOPHAN--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GGCITRQD 9
GGC+T ++
Sbjct: 350 GGCVTLEE 357


>sp|PGP_NITMS|PHOSPHOGLYCOLATE phosphatase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DGGCIT 6
+GGCIT
Sbjct: 68 NGGCIT 73


>sp|HEM3_METAR|PROBABLE porphobilinogen deaminase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DGGCI 5
DGGC+
Sbjct: 230 DGGCV 234




112|Sequence|556|565|TRQDLPKDCF

>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 TRQDLPKD 8
T++DLP+D
Sbjct: 876 TKEDLPED 883


>sp|PCNA_ARCFU|DNA polymerase sliding clamp|Archaeoglobus fulgidus (strain ATCC

Query: 4 DLPKDCF 10
D+PKD F
Sbjct: 50 DIPKDSF 56


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 4 DLPKDCF 10
D P DCF
Sbjct: 187 DAPTDCF 193


>sp|FAU1_HALSA|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 700922

Query: 4 DLPKDCF 10
DLP+D F
Sbjct: 78 DLPRDTF 84


>sp|FAU1_HALS3|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 29341

Query: 4 DLPKDCF 10
DLP+D F
Sbjct: 78 DLPRDTF 84


>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 1 TRQDLPKD 8
T+QDL KD
Sbjct: 244 TQQDLEKD 251


>sp|ASSY_METVA|ARGININOSUCCINATE synthase|Methanococcus vannielii

Query: 4 DLPKDCF 10
+ PK+CF
Sbjct: 196 ETPKECF 202


>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 DLPKDCF 10
+ PK+CF
Sbjct: 196 ETPKECF 202




113|Sequence|561|570|PKDCFIIYQG

>sp|DPCKG_METST|GTP-DEPENDENT dephospho-CoA kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PKDCFIIY 8
PKD FI+Y
Sbjct: 133 PKDTFILY 140


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 PKDCFI 6
PKDC+I
Sbjct: 400 PKDCYI 405


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 FIIYQG 10
FIIYQG
Sbjct: 673 FIIYQG 678


>sp|PCNA_METMP|DNA polymerase sliding clamp|Methanococcus maripaludis (strain DSM

Query: 1 PKDCFIIYQG 10
PKD F Y+G
Sbjct: 52 PKDVFEEYEG 61


>sp|PCNA_METM7|DNA polymerase sliding clamp|Methanococcus maripaludis (strain C7 /

Query: 1 PKDCFIIYQG 10
PKD F Y+G
Sbjct: 52 PKDVFEEYEG 61


>sp|PCNA_METM5|DNA polymerase sliding clamp|Methanococcus maripaludis (strain C5 /

Query: 1 PKDCFIIYQG 10
PKD F Y+G
Sbjct: 52 PKDVFEEYEG 61


>sp|HEM1_IGNH4|GLUTAMYL-TRNA reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PKDCFIIYQG 10
P++ F+IY G
Sbjct: 91 PEEKFVIYYG 100


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 1 PKDCFI 6
PK CFI
Sbjct: 100 PKTCFI 105


>sp|GFCR_HALVD|TRANSCRIPTIONAL regulator GfcR|Haloferax volcanii (strain ATCC 29605

Query: 2 KDCFII 7
+DCFI+
Sbjct: 149 RDCFIV 154


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 FIIYQG 10
FI+YQG
Sbjct: 672 FILYQG 677


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 FIIYQG 10
FI+YQG
Sbjct: 677 FILYQG 682


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 FIIYQG 10
FI+YQG
Sbjct: 672 FILYQG 677


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 FIIYQG 10
FI+YQG
Sbjct: 672 FILYQG 677


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 FIIYQG 10
FI+YQG
Sbjct: 667 FILYQG 672


>sp|Y1298_METVS|UPF0248 protein Mevan_1298|Methanococcus vannielii (strain ATCC 35089

Query: 1 PKDCFIIY 8
PKD IIY
Sbjct: 17 PKDYVIIY 24


>sp|RL35A_METKA|LARGE ribosomal subunit protein eL33|Methanopyrus kandleri (strain AV19

Query: 1 PKDCFIIYQG 10
P+ C I ++G
Sbjct: 21 PRQCIIEFEG 30


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 5 FIIYQG 10
F++YQG
Sbjct: 780 FVVYQG 785


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKDCFIIYQ 9
PK+C ++++
Sbjct: 190 PKNCHVVHK 198


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 2 KDCFIIYQG 10
K CF+ Y G
Sbjct: 308 KICFVAYGG 316


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 PKDCFIIY 8
P DC++ Y
Sbjct: 29 PADCYVRY 36


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 2 KDCFIIYQG 10
K CF+ Y G
Sbjct: 308 KICFVAYGG 316




114|Sequence|566|575|IIYQGHHGDV

>sp|GLPB_HALSA|PROBABLE anaerobic glycerol-3-phosphate dehydrogenase subunit|Halobacterium

Query: 3 YQGHHGD 9
YQGHH D
Sbjct: 98 YQGHHTD 104


>sp|GLPB_HALS3|PROBABLE anaerobic glycerol-3-phosphate dehydrogenase subunit|Halobacterium

Query: 3 YQGHHGD 9
YQGHH D
Sbjct: 98 YQGHHTD 104


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 2 IYQGHHGDV 10
IYQG+ GD+
Sbjct: 820 IYQGNGGDL 828


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 2 IYQGHHGDV 10
+YQG+ GD+
Sbjct: 696 VYQGNGGDL 704


>sp|RL24_PYRFU|LARGE ribosomal subunit protein uL24|Pyrococcus furiosus (strain ATCC

Query: 3 YQGHHGDV 10
Y+GH G V
Sbjct: 59 YKGHEGKV 66


>sp|MALG_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 2 IYQGHHGDV 10
++QG HG++
Sbjct: 231 LFQGVHGEI 239


>sp|Y812_METTH|UPF0305 protein MTH_812|Methanothermobacter thermautotrophicus (strain

Query: 2 IYQGH 6
IYQGH
Sbjct: 65 IYQGH 69


>sp|Y2181_ARCFU|UNCHARACTERIZED protein AF_2181|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IIYQGHHGDV 10
+IY G+ GD+
Sbjct: 145 LIYYGYTGDL 154


>sp|RL24_METKA|LARGE ribosomal subunit protein uL24|Methanopyrus kandleri (strain AV19

Query: 3 YQGHHGDV 10
++GH G+V
Sbjct: 60 FKGHEGEV 67


>sp|YF1B_METJA|UNCHARACTERIZED protein MJ1516.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IIYQGHHGDV 10
I Y GH+G +
Sbjct: 31 IPYNGHNGAI 40


>sp|RL18_META3|LARGE ribosomal subunit protein uL18|Methanococcus aeolicus (strain

Query: 3 YQGHHGDV 10
Y+GH G+V
Sbjct: 72 YKGHCGNV 79


>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 5 GHHGD 9
GHHGD
Sbjct: 63 GHHGD 67


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IYQGHHG 8
+Y+ HHG
Sbjct: 429 LYEFHHG 435


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IYQGHHGD 9
+ +G+HGD
Sbjct: 146 VKEGYHGD 153




115|Sequence|571|580|HHGDVGAPIA

>sp|SYS_SULAC|SERINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GDVGAPIA 10
GD+GAP A
Sbjct: 346 GDLGAPAA 353


>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 GDVGAPIA 10
GD+GAP A
Sbjct: 348 GDLGAPAA 355


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 GDVGAPIA 10
GD+GAP A
Sbjct: 348 GDLGAPAA 355


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GDVGAPIA 10
GD G PIA
Sbjct: 39 GDFGTPIA 46


>sp|Y872_METJA|UNCHARACTERIZED lipoprotein MJ0872|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HHGDVGAP 8
HH VGAP
Sbjct: 124 HHTIVGAP 131


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GDVGAPIA 10
GD G P+A
Sbjct: 39 GDFGTPVA 46


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 GDVGAPIA 10
GD G P+A
Sbjct: 39 GDFGTPVA 46


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 HHGDVGAPI 9
H G++G P+
Sbjct: 501 HKGELGTPL 509


>sp|HEM1_HYPBU|GLUTAMYL-TRNA reductase|Hyperthermus butylicus (strain DSM 5456

Query: 2 HGDVGAPIA 10
+G+VGAP A
Sbjct: 150 YGNVGAPGA 158


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HHGDVGAPIA 10
+G+V AP+A
Sbjct: 427 RNGEVSAPVA 436


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 3 GDVGAPI 9
GD GAP+
Sbjct: 250 GDFGAPV 256


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 3 GDVGAPI 9
G++GAP+
Sbjct: 135 GEIGAPV 141


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 2 HGDVGAPIA 10
HG VGA +A
Sbjct: 379 HGFVGADLA 387


>sp|TRPD_PYRAE|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GDVGAP 8
GD+GAP
Sbjct: 250 GDLGAP 255




116|Sequence|576|585|GAPIADVILP

>sp|CAPPA_METTH|PHOSPHOENOLPYRUVATE carboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GAPIADVILP 10
AP+ +VILP
Sbjct: 122 AAPVFEVILP 131


>sp|CAPPA_PYRAB|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 2 APIADVILP 10
API +VILP
Sbjct: 122 APIFEVILP 130


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 2 APIADVILP 10
A +ADV+LP
Sbjct: 423 AKLADVVLP 431


>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 APIADVILP 10
API +VILP
Sbjct: 122 APIFEVILP 130


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 APIADVILP 10
A +ADV+LP
Sbjct: 426 AKLADVVLP 434


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 APIADVILP 10
API ++ILP
Sbjct: 123 APIFEIILP 131


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 APIADVILP 10
A +ADV+LP
Sbjct: 424 AQVADVVLP 432


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 2 APIADVILP 10
A +ADV+LP
Sbjct: 303 AEMADVVLP 311


>sp|CAPPA_PYRFU|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 APIADVILP 10
API +VILP
Sbjct: 122 APIFEVILP 130


>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 APIADVILP 10
API VI+P
Sbjct: 287 APIEGVIIP 295


>sp|APGM1_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanocaldococcus jannaschii (strain

Query: 1 GAPIADVILP 10
G P A++ILP
Sbjct: 216 GLPPANIILP 225


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 1 GAPIADVI 8
GAP AD+I
Sbjct: 540 GAPAADII 547


>sp|RL4_METTP|LARGE ribosomal subunit protein uL4|Methanothrix thermoacetophila

Query: 1 GAPIADVILP 10
G P+ +++LP
Sbjct: 10 GNPVGEIVLP 19


>sp|APGM_METKA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 GAPIADVILP 10
G P A+VILP
Sbjct: 226 GKPPANVILP 235


>sp|LEU3_HALVD|3-ISOPROPYLMALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 GAPIADVILP 10
G ADVILP
Sbjct: 70 GETAADVILP 79


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 2 APIADVILP 10
A ADV+LP
Sbjct: 428 AEFADVVLP 436


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 1 GAPIADVI 8
G PI DVI
Sbjct: 308 GTPIKDVI 315


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 PIADVIL 9
P+ADV+L
Sbjct: 244 PLADVVL 250


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 3 PIADVIL 9
P+ADV+L
Sbjct: 244 PLADVVL 250




117|Sequence|581|590|DVILPGAAYT

>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 DVILPGAAY 9
DV+LPGA++
Sbjct: 428 DVVLPGASW 436


>sp|RL5_SACS2|LARGE ribosomal subunit protein uL5|Saccharolobus solfataricus (strain

Query: 2 VILPGAAY 9
VILPGA Y
Sbjct: 117 VILPGARY 124


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LPGAAYT 10
PGAAYT
Sbjct: 201 FPGAAYT 207


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 DVILPGAAY 9
D++ PGA++
Sbjct: 313 DILFPGASH 321


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 DVILPGAAY 9
D++ PGA++
Sbjct: 313 DILFPGASH 321


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DVILPGAAY 9
DVILP Y
Sbjct: 371 DVILPAMGY 379


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 DVILPGAAY 9
DV+LP A +
Sbjct: 427 DVVLPAACW 435


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 DVILPGAAY 9
DV+LP A +
Sbjct: 430 DVVLPAACW 438


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 DVILPG 6
DVI+PG
Sbjct: 55 DVIMPG 60


>sp|SAT_NITMS|SULFATE adenylyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DVILPGAAYT 10
D PG AYT
Sbjct: 131 DTAHPGVAYT 140


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 2 VILPGAAYT 10
++ P AAYT
Sbjct: 15 ILRPSAAYT 23


>sp|TRUA_NATPD|TRNA pseudouridine synthase A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DVILPGAAYT 10
DV+ PG +T
Sbjct: 224 DVVYPGVEFT 233


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 DVILPGAAY 9
DV+LP A +
Sbjct: 432 DVVLPAACW 440


>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 1 DVILPGAAY 9
DV+LP A +
Sbjct: 438 DVVLPAATW 446


>sp|PURT_METMP|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 DVILPGAAY 9
D++ PGA++
Sbjct: 313 DIVSPGASH 321




118|Sequence|586|595|GAAYTEKSAT

>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 GAAYTEKSA 9
G+AY+EK A
Sbjct: 675 GSAYSEKEA 683




119|Sequence|591|600|EKSATYVNTE

>sp|GLCD1_VULM7|GLUCOSE 1-dehydrogenase 1|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 EKSATYVNT 9
E ATYVNT
Sbjct: 219 EIGATYVNT 227


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EKSATYVNTE 10
EK T++NT+
Sbjct: 317 EKDGTFINTD 326


>sp|Y303_PYRFU|UPF0284 protein PF0303|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EKSATYVNT 9
+KSAT++ T
Sbjct: 256 DKSATFIKT 264




120|Sequence|596|605|YVNTEGRAQQ

>sp|DCD_PYRAE|DCTP deaminase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 TEGRAQ 9
TEGRAQ
Sbjct: 150 TEGRAQ 155


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 1 YVNTEGRAQQ 10
Y NT+G QQ
Sbjct: 1224 YYNTQGLLQQ 1233


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 1 YVNTEGRAQQ 10
YV+ + RAQQ
Sbjct: 471 YVDEQERAQQ 480




121|Sequence|601|610|GRAQQTKVAV

>sp|RS5_SULAC|SMALL ribosomal subunit protein uS5|Sulfolobus acidocaldarius (strain

Query: 1 GRAQQTKVAV 10
G+A+Q +VA+
Sbjct: 94 GKAKQLRVAI 103


>sp|RL1_META3|LARGE ribosomal subunit protein uL1|Methanococcus aeolicus (strain ATCC

Query: 1 GRAQQTKVAV 10
GR +++K+AV
Sbjct: 53 GRGKESKIAV 62


>sp|RS5_SACS2|SMALL ribosomal subunit protein uS5|Saccharolobus solfataricus (strain

Query: 1 GRAQQTKVAV 10
G+A+Q +VA+
Sbjct: 94 GKAKQLRVAI 103


>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 1 GRAQQTKVAV 10
G+A+Q +VA+
Sbjct: 94 GKAKQLRVAI 103




122|Sequence|606|615|TKVAVTPPGL

>sp|RS3_PYRFU|SMALL ribosomal subunit protein uS3|Pyrococcus furiosus (strain ATCC

Query: 2 KVAVTPPG 9
KVA+ PPG
Sbjct: 179 KVAIMPPG 186


>sp|DNAG_NANEQ|DNA primase DnaG|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 VAVTPPG 9
VAV PPG
Sbjct: 243 VAVAPPG 249


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 3 VAVTPPG 9
VA++PPG
Sbjct: 498 VAISPPG 504


>sp|RL44E_THEAC|LARGE ribosomal subunit protein eL42|Thermoplasma acidophilum (strain

Query: 4 AVTPPGL 10
A+TPPG+
Sbjct: 77 AITPPGI 83


>sp|DHA_METMP|ALANINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TKVAVTPPGL 10
+VA+TP G+
Sbjct: 14 NRVAITPAGV 23


>sp|Y021_PYRIL|UPF0282 protein Pisl_0021|Pyrobaculum islandicum (strain DSM 4184

Query: 1 TKVAVTPP 8
T+VA +PP
Sbjct: 147 TRVAASPP 154


>sp|Y934_PYRNV|UPF0282 protein Tneu_0934|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 TKVAVTPP 8
T+VA +PP
Sbjct: 147 TRVAASPP 154




123|Sequence|611|620|TPPGLAREDW

>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM

Query: 2 PPGLAREDW 10
PPGL+R +W
Sbjct: 63 PPGLSRREW 71


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 2 PPGLAREDW 10
PPG A EDW
Sbjct: 458 PPGEALEDW 466


>sp|SRP54_STAMF|SIGNAL recognition particle 54 kDa|Staphylothermus marinus (strain ATCC

Query: 2 PPGLAREDW 10
PPG+ R +W
Sbjct: 62 PPGITRREW 70


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PPGLAREDW 10
PPG A +DW
Sbjct: 338 PPGDAMDDW 346


>sp|SRP54_AERPE|SIGNAL recognition particle 54 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPGLAREDW 10
PPG+ R DW
Sbjct: 61 PPGVTRRDW 69


>sp|PRIS_METAR|DNA primase small subunit PriS|Methanocella arvoryzae (strain DSM

Query: 1 TPPGLAREDW 10
PPGLA+ +W
Sbjct: 24 VPPGLAQREW 33


>sp|RNH2_METB6|RIBONUCLEASE HII|Methanoregula boonei (strain DSM 21154

Query: 2 PPGLAREDW 10
PP +AR+ W
Sbjct: 186 PPPIARKSW 194


>sp|SERC_METBF|PHOSPHOSERINE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TPPGLAREDW 10
TP LA EDW
Sbjct: 244 TPSMLANEDW 253


>sp|SERC_METMA|PHOSPHOSERINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TPPGLAREDW 10
TP LA EDW
Sbjct: 244 TPSMLANEDW 253


>sp|SERC_METAC|PHOSPHOSERINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TPPGLAREDW 10
TP LA EDW
Sbjct: 244 TPSMLANEDW 253


>sp|RNH2_SULTO|RIBONUCLEASE HII|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TPPGLAREDW 10
TPP + R W
Sbjct: 184 TPPPIIRRSW 193


>sp|MDH_METMA|MALATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PGLARED 9
PG++RED
Sbjct: 83 PGMSRED 89


>sp|RNH2_METHJ|RIBONUCLEASE HII|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PPGLAREDW 10
PP +AR W
Sbjct: 186 PPVIARSSW 194


>sp|MDH_THEVO|MALATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PGLARED 9
PG++RED
Sbjct: 90 PGMSRED 96


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 TPPGLAREDW 10
T PG+ E+W
Sbjct: 220 TSPGIEMENW 229


>sp|MDH_METBF|MALATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PGLARED 9
PG+ RED
Sbjct: 83 PGMTRED 89


>sp|MDH_METAC|MALATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PGLARED 9
PG+ RED
Sbjct: 83 PGMTRED 89


>sp|NTPTH_THEPD|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermofilum pendens (strain DSM 2475

Query: 2 PPGLARE 8
PP LARE
Sbjct: 169 PPQLARE 175


>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC

Query: 2 PPGLAREDW 10
P G+ EDW
Sbjct: 77 PAGMDLEDW 85


>sp|UPP_NATPD|URACIL phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PPGLAR 7
PPGLAR
Sbjct: 179 PPGLAR 184


>sp|ALF1_AERPE|PROBABLE fructose-bisphosphate aldolase class 1|Aeropyrum pernix (strain

Query: 1 TPPGLAREDW 10
T PG+AR W
Sbjct: 62 TTPGIARLTW 71


>sp|RF1_SACS2|PEPTIDE chain release factor subunit|Saccharolobus solfataricus (strain

Query: 3 PGLAREDW 10
PG A+ED+
Sbjct: 223 PGYAKEDF 230


>sp|RNH2_METMP|RIBONUCLEASE HII|Methanococcus maripaludis (strain DSM 14266

Query: 1 TPPGLAREDW 10
T P +AR+ W
Sbjct: 213 TLPKIARKSW 222


>sp|RNH2_THEPD|RIBONUCLEASE HII|Thermofilum pendens (strain DSM 2475

Query: 2 PPGLAREDW 10
PP +AR++W
Sbjct: 198 PPPIARKEW 206


>sp|PANB_CALMQ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 PPGLARE 8
P GLARE
Sbjct: 186 PAGLARE 192


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 1 TPPGLARE 8
TPP +ARE
Sbjct: 131 TPPDVARE 138


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PGLAREDW 10
PGL R+D+
Sbjct: 466 PGLLRDDY 473


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 PPGLARED 9
PPG ++ED
Sbjct: 445 PPGNSKED 452


>sp|GPMA_METB6|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanoregula boonei (strain DSM 21154

Query: 2 PPGLARED 9
PP LA ED
Sbjct: 121 PPALAEED 128


>sp|THYX_HALMA|FLAVIN-DEPENDENT thymidylate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TPPGLAREDW 10
TPP DW
Sbjct: 120 TPPSATDPDW 129


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TPPGLAREDW 10
TPP + DW
Sbjct: 103 TPPYYIQYDW 112


>sp|Y1612_HALMA|UNCHARACTERIZED protein rrnAC1612|Haloarcula marismortui (strain ATCC 43049

Query: 1 TPPGLAREDW 10
TPP L +E W
Sbjct: 66 TPPHLRKEMW 75


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM

Query: 1 TPPGLAREDW 10
TPP R +W
Sbjct: 24 TPPAANRREW 33


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 GLAREDW 10
GLA +DW
Sbjct: 287 GLAEDDW 293


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 TPPGLAREDW 10
TPP + DW
Sbjct: 103 TPPYYIQYDW 112


>sp|METE_AERPE|METHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 5 LAREDW 10
LARE+W
Sbjct: 327 LAREEW 332


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 GLAREDW 10
GL+ +DW
Sbjct: 286 GLSEDDW 292




124|Sequence|616|625|AREDWKIIRA

>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 DWKIIR 9
DW+IIR
Sbjct: 161 DWRIIR 166


>sp|T1S2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii

Query: 3 EDWKIIR 9
EDW+++R
Sbjct: 23 EDWEVVR 29


>sp|RNZ_SULTO|RIBONUCLEASE Z|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 EDWKIIR 9
+DW+IIR
Sbjct: 160 KDWRIIR 166


>sp|RNZ_SACS2|RIBONUCLEASE Z|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 DWKIIR 9
DW++IR
Sbjct: 162 DWRVIR 167


>sp|DHQS_METTH|3-DEHYDROQUINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 EDWKII 8
EDWKII
Sbjct: 125 EDWKII 130


>sp|DHQS_NITMS|3-DEHYDROQUINATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 EDWKII 8
+DWKII
Sbjct: 105 KDWKII 110


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 AREDWKIIR 9
A DWKI++
Sbjct: 463 AIADWKIVK 471


>sp|SECE_METS5|PROTEIN translocase subunit SecE|Metallosphaera sedula (strain ATCC 51363

Query: 2 REDWKII 8
REDWK I
Sbjct: 11 REDWKRI 17


>sp|PRIL_SACS2|DNA primase large subunit PriL|Saccharolobus solfataricus (strain ATCC

Query: 2 REDWKI 7
+EDWK+
Sbjct: 153 KEDWKL 158


>sp|DHQS_CENSY|3-DEHYDROQUINATE synthase|Cenarchaeum symbiosum (strain A)

Query: 3 EDWKII 8
+DWKII
Sbjct: 90 QDWKII 95


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 2 REDWKIIR 9
R+DWK +R
Sbjct: 239 RKDWKGVR 246


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AREDWKIIRA 10
+ E WK+IR+
Sbjct: 454 SHEPWKLIRS 463


>sp|DHQS_ARCFU|3-DEHYDROQUINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EDWKII 8
EDWK+I
Sbjct: 79 EDWKVI 84


>sp|SECE_SULAC|PROTEIN translocase subunit SecE|Sulfolobus acidocaldarius (strain ATCC

Query: 2 REDWK 6
REDWK
Sbjct: 17 REDWK 21


>sp|SECE_SULTO|PROTEIN translocase subunit SecE|Sulfurisphaera tokodaii (strain DSM

Query: 2 REDWKII 8
REDWK I
Sbjct: 11 REDWKRI 17


>sp|RL15E_STAMF|LARGE ribosomal subunit protein eL15|Staphylothermus marinus (strain ATCC

Query: 1 AREDWKII 8
ARE W+I+
Sbjct: 207 AREPWQIV 214


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 3 EDWKIIRA 10
E WK+I A
Sbjct: 9 ERWKVIEA 16


>sp|RNH2_SACS2|RIBONUCLEASE HII|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 REDWKIIRA 10
R WKI+R+
Sbjct: 189 RRSWKILRS 197


>sp|Y1033_PYRHO|UPF0310 protein PH1033|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 REDWKIIR 9
RE+W++I+
Sbjct: 10 RENWEVIK 17




125|Sequence|621|630|KIIRALSEIA

>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 IIRALSEIA 10
+IRAL+E+A
Sbjct: 261 VIRALTEVA 269


>sp|Y1094_METJA|UNCHARACTERIZED protein MJ1094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IIRALSEIA 10
I+RAL+E+A
Sbjct: 259 ILRALTEVA 267


>sp|CMR1A_PYRFU|CRISPR system Cmr subunit Cmr1-1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KIIRALSEI 9
KI+RA SE+
Sbjct: 161 KIVRASSEV 169


>sp|RL18A_SACS2|LARGE ribosomal subunit protein eL20|Saccharolobus solfataricus (strain

Query: 1 KIIRALSE 8
KI+RAL+E
Sbjct: 28 KIVRALNE 35


>sp|RL18A_SACI7|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 KIIRALSE 8
KI+RAL+E
Sbjct: 28 KIVRALNE 35


>sp|RL18A_SACI6|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 KIIRALSE 8
KI+RAL+E
Sbjct: 28 KIVRALNE 35


>sp|RL18A_SACI4|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 KIIRALSE 8
KI+RAL+E
Sbjct: 28 KIVRALNE 35


>sp|RL18A_SACI3|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 KIIRALSE 8
KI+RAL+E
Sbjct: 28 KIVRALNE 35


>sp|RL18A_SACI2|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 KIIRALSE 8
KI+RAL+E
Sbjct: 28 KIVRALNE 35


>sp|RL18A_SACI1|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 KIIRALSE 8
KI+RAL+E
Sbjct: 28 KIVRALNE 35


>sp|TRPD_PYRFU|ANTHRANILATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KIIRALSEIA 10
KII+ L EIA
Sbjct: 310 KIIKKLEEIA 319




126|Sequence|626|635|LSEIAGMTLP

>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSEIAGM 7
LSEIAGM
Sbjct: 87 LSEIAGM 93


>sp|IDI2_SACSH|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 SEIAGMTLP 10
++IAGM LP
Sbjct: 290 ADIAGMALP 298


>sp|IDI2_SACI7|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 SEIAGMTLP 10
++IAGM LP
Sbjct: 290 ADIAGMALP 298


>sp|IDI2_SACI6|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SEIAGMTLP 10
++IAGM LP
Sbjct: 290 ADIAGMALP 298


>sp|IDI2_SACI4|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SEIAGMTLP 10
++IAGM LP
Sbjct: 290 ADIAGMALP 298


>sp|IDI2_SACI3|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.16.27)

Query: 2 SEIAGMTLP 10
++IAGM LP
Sbjct: 290 ADIAGMALP 298


>sp|IDI2_SACI2|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 SEIAGMTLP 10
++IAGM LP
Sbjct: 290 ADIAGMALP 298


>sp|IDI2_SACI1|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 SEIAGMTLP 10
++IAGM LP
Sbjct: 290 ADIAGMALP 298


>sp|IDI2_SACS2|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SEIAGMTLP 10
++IAGM LP
Sbjct: 290 ADIAGMALP 298


>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SEIAGMTL 9
+E+AG+TL
Sbjct: 131 TEVAGLTL 138


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 1 LSEIAGMT 8
L EIAG+T
Sbjct: 434 LDEIAGLT 441


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LSEIAGMTLP 10
+SE GM LP
Sbjct: 208 MSEALGMALP 217


>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LSEIAGMTLP 10
+SE GM LP
Sbjct: 207 MSEALGMALP 216


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LSEIAGMTLP 10
+SE GM LP
Sbjct: 207 MSEALGMALP 216


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LSEIAGMTLP 10
+SE GM LP
Sbjct: 207 MSEALGMALP 216


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LSEIAGMTLP 10
+SE GM LP
Sbjct: 207 MSEALGMALP 216


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LSEIAGMTLP 10
+SE GM LP
Sbjct: 207 MSEALGMALP 216


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LSEIAGMTLP 10
+SE GM LP
Sbjct: 207 MSEALGMALP 216


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LSEIAGMTLP 10
+SE GM LP
Sbjct: 207 MSEALGMALP 216


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LSEIAGMTLP 10
LSE G++LP
Sbjct: 207 LSEALGLSLP 216




127|Sequence|631|640|GMTLPYDTLD

>sp|DPO4_SULAC|DNA polymerase IV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 MTLPYDTLD 10
+TLPY+T D
Sbjct: 250 LTLPYNTRD 258


>sp|DPO4_SACSO|DNA polymerase IV|Saccharolobus solfataricus (Sulfolobus solfataricus)

Query: 2 MTLPYDTLD 10
+TLPY+T D
Sbjct: 250 LTLPYNTRD 258


>sp|DPO4_METAC|DNA polymerase IV|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 TLPYDTLD 10
TLP DTLD
Sbjct: 261 TLPEDTLD 268


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GMTLPYDTLD 10
G++ YDTLD
Sbjct: 402 GVSSKYDTLD 411


>sp|DPO41_METMA|DNA polymerase IV 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 TLPYDTLD 10
TLP D+LD
Sbjct: 260 TLPEDSLD 267


>sp|KHSE_METM6|HOMOSERINE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 GMTLPYDTLD 10
++ PYDTL+
Sbjct: 25 ALSKPYDTLE 34


>sp|KHSE_METM7|HOMOSERINE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 GMTLPYDTLD 10
++ PYDTL+
Sbjct: 25 ALSKPYDTLE 34


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 2 MTLPYDT 8
MTLPY T
Sbjct: 933 MTLPYST 939


>sp|NROR_PYRFU|NAD(P)H:RUBREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LPYDTL 9
+PYDTL
Sbjct: 92 VPYDTL 97


>sp|HEM3_PYRAE|PROBABLE porphobilinogen deaminase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 TLPYDTL 9
TLPYD +
Sbjct: 99 TLPYDAV 105


>sp|METK_METB6|S-ADENOSYLMETHIONINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 GMTLPYDTL 9
G+T+P DT+
Sbjct: 99 GVTIPTDTV 107


>sp|MCH_METJA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GMTLPY 6
G+TLPY
Sbjct: 74 GITLPY 79


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 2 MTLPYDTLD 10
M+LP+ T+D
Sbjct: 1 MSLPFYTID 9


>sp|GUAAB_METMJ|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoculleus

Query: 2 MTLPYDTL 9
+ LPY+TL
Sbjct: 266 LLLPYETL 273


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GMTLPYD 7
G LPYD
Sbjct: 315 GFNLPYD 321




128|Sequence|636|645|YDTLDQVRNR

>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 2 DTLDQVRNR 10
D +D++RNR
Sbjct: 343 DVMDEIRNR 351


>sp|PRIL_THEAC|DNA primase large subunit PriL|Thermoplasma acidophilum (strain ATCC

Query: 1 YDTLDQVR 8
+DTLDQ+R
Sbjct: 179 FDTLDQIR 186


>sp|METXA_METFP|HOMOSERINE O-acetyltransferase|Methanobacterium formicicum (strain DSM 3637

Query: 1 YDTLDQVRNR 10
YD LDQ+ R
Sbjct: 431 YDKLDQIMTR 440


>sp|ALBA_METS5|DNA/RNA-BINDING protein Alba|Metallosphaera sedula (strain ATCC 51363

Query: 2 DTLDQVRNR 10
DT++ VRNR
Sbjct: 51 DTVEIVRNR 59


>sp|HFLX_SACS2|GTPASE HflX|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YDTLDQVRN 9
YD L Q++N
Sbjct: 45 YDKLQQIKN 53


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 1 YDTLDQVRNR 10
Y+T+D+V++R
Sbjct: 246 YETIDKVKSR 255


>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YDTLDQVRNR 10
YD +D++R +
Sbjct: 336 YDFVDEIRQK 345


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 YDTLDQVR 8
YD L+QVR
Sbjct: 301 YDDLNQVR 308


>sp|ALBA_SULAC|DNA/RNA-BINDING protein Alba|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DTLDQVRNR 10
DT++ VRNR
Sbjct: 50 DTVEIVRNR 58


>sp|MOAA_PYRFU|PROBABLE GTP 3',8-cyclase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YDTLDQV 7
YD LDQV
Sbjct: 129 YDVLDQV 135


>sp|ALBA1_SULTO|DNA/RNA-BINDING protein Alba 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DTLDQVRNR 10
DT++ VRNR
Sbjct: 52 DTVEIVRNR 60


>sp|ALBA1_SACSH|DNA/RNA-BINDING protein Alba 1|Saccharolobus shibatae (strain ATCC 51178

Query: 2 DTLDQVRNR 10
DT++ VRNR
Sbjct: 51 DTVEIVRNR 59


>sp|ALBA1_SACS2|DNA/RNA-BINDING protein Alba 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DTLDQVRNR 10
DT++ VRNR
Sbjct: 51 DTVEIVRNR 59


>sp|ALBA1_SACI5|DNA/RNA-BINDING protein Alba 1|Saccharolobus islandicus (strain REY15A)

Query: 2 DTLDQVRNR 10
DT++ VRNR
Sbjct: 51 DTVEIVRNR 59


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 3 TLDQVRN 9
TLD++RN
Sbjct: 328 TLDEIRN 334


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 4 LDQVRNR 10
LD++RNR
Sbjct: 257 LDEIRNR 263


>sp|COFH_METAR|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocella arvoryzae (strain DSM

Query: 1 YDTLDQVR 8
+DT DQ+R
Sbjct: 31 FDTADQLR 38


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 1 YDTLDQVRNR 10
Y+T+D+V++R
Sbjct: 246 YETIDKVKSR 255


>sp|RLME_METMA|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina mazei (strain

Query: 2 DTLDQVRN 9
D LD+VRN
Sbjct: 158 DYLDEVRN 165


>sp|ALBA_IGNH4|DNA/RNA-BINDING protein Alba|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YDTLDQVRNR 10
DT++ VRNR
Sbjct: 49 VDTVEIVRNR 58


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YDTLDQVRNR 10
YD D++R+R
Sbjct: 443 YDLADEIRSR 452


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 1 YDTLDQVRNR 10
Y TL++VR R
Sbjct: 364 YWTLEEVRER 373


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YDTLDQVRNR 10
Y TL++VR R
Sbjct: 364 YWTLEEVRER 373


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 4 LDQVRNR 10
LD++RNR
Sbjct: 259 LDEIRNR 265


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC 700027

Query: 3 TLDQVRNR 10
TLD +RN+
Sbjct: 229 TLDYIRNK 236


>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 YDTLDQVRN 9
YD DQ+R+
Sbjct: 436 YDLSDQIRD 444




129|Sequence|641|650|QVRNRLEEVS

>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 2 VRNRLEEV 9
VRNR+EE+
Sbjct: 420 VRNRVEEI 427


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii (strain

Query: 1 QVRNRLEE 8
Q++NRLEE
Sbjct: 129 QIKNRLEE 136


>sp|Y821_METMA|UPF0292 protein MM_0821|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QVRNRLEEVS 10
Q+RN+L+ +S
Sbjct: 104 QIRNKLKLIS 113


>sp|Y1088_ARCFU|UNCHARACTERIZED protein AF_1088|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QVRNRLEEV 9
Q RN LEE+
Sbjct: 18 QTRNLLEEI 26


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 QVRNRLEEVS 10
+VR RLE +S
Sbjct: 175 EVRERLERIS 184




130|Sequence|646|655|LEEVSPNLVR

>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEEVSPN 7
LEE+SPN
Sbjct: 2018 LEEISPN 2024


>sp|ARLY_METAR|ARGININOSUCCINATE lyase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LEEVSPNLVR 10
L+EV+P L+R
Sbjct: 324 LQEVTPQLLR 333


>sp|PIP_THEAC|PROLINE iminopeptidase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EEVSPNLVR 10
+EV+PN+ R
Sbjct: 244 DEVTPNVAR 252


>sp|THIE_METM5|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 LEEVSPNLV 9
++E++PNL+
Sbjct: 94 IKEIAPNLI 102


>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LEEVSPNLV 9
+EE PNLV
Sbjct: 158 IEEAKPNLV 166


>sp|THIE_METM6|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 LEEVSPNLV 9
++E++PNL+
Sbjct: 94 IKEIAPNLI 102


>sp|THIE_METMP|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LEEVSPNLV 9
++E++PNL+
Sbjct: 94 IKEIAPNLI 102


>sp|TSR3_METBU|16S rRNA aminocarboxypropyltransferase|Methanococcoides burtonii

Query: 1 LEEVSPNLVR 10
+EEV P+L+R
Sbjct: 79 VEEVFPHLMR 88


>sp|ARLY_METTH|ARGININOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LEEVSPNLVR 10
L+EV+P+L R
Sbjct: 319 LQEVTPHLWR 328


>sp|THIE_METM7|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 LEEVSPNLV 9
++E++PNL+
Sbjct: 94 IKEIAPNLI 102


>sp|ARLY_METBF|ARGININOSUCCINATE lyase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LEEVSPNLVR 10
L+E +PNL R
Sbjct: 320 LQEATPNLWR 329


>sp|Y996_METST|UPF0179 protein Msp_0996|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LEEVSPNLV 9
+EE+ P LV
Sbjct: 118 IEEIGPELV 126


>sp|THIE_PYRFU|THIAMINE-PHOSPHATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EEVSPNLV 9
+E++PNL+
Sbjct: 95 KEIAPNLI 102


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 LEEVSPNLV 9
+EE++PN +
Sbjct: 166 MEEIAPNKI 174


>sp|ARLY_METM6|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C6 /

Query: 1 LEEVSPNL 8
L+E+SP+L
Sbjct: 321 LQEISPHL 328


>sp|ARLY_METM5|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C5 /

Query: 1 LEEVSPNL 8
L+E+SP+L
Sbjct: 321 LQEISPHL 328




131|Sequence|651|660|PNLVRYDDIE

>sp|SODF_PYRAE|SUPEROXIDE dismutase [Fe]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 NLVRYDDIE 10
N+V +DD+E
Sbjct: 188 NVVNWDDVE 196


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 1 PNLVRYDDIE 10
P +VR D+IE
Sbjct: 178 PEIVRGDEIE 187


>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 NLVRYDDIE 10
++VRYD+++
Sbjct: 61 DVVRYDEVD 69


>sp|MTSA_METMA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 RYDDIE 10
RYDD+E
Sbjct: 338 RYDDVE 343


>sp|TRUA_ARCFU|TRNA pseudouridine synthase A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VRYDDIE 10
V+YDD+E
Sbjct: 221 VKYDDVE 227


>sp|SODF_AERPE|SUPEROXIDE dismutase [Mn/Fe]|Aeropyrum pernix (strain ATCC 700893

Query: 2 NLVRYDDIE 10
N+V +DD+E
Sbjct: 188 NVVNWDDVE 196


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 LVRYDD 8
LVRYDD
Sbjct: 926 LVRYDD 931


>sp|T2MT_METTF|TYPE II restriction enzyme MthTI|Methanothermobacter thermautotrophicus

Query: 3 LVRYDDI 9
LVRYD+I
Sbjct: 275 LVRYDEI 281


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 VRYDDI 9
VRYDDI
Sbjct: 355 VRYDDI 360


>sp|HTPX1_METAC|PROTEASE HtpX homolog 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NLVRYDDIE 10
NL+ Y++IE
Sbjct: 118 NLLSYEEIE 126


>sp|AATE_METST|A-TYPE ATP synthase subunit E|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LVRYDDIE 10
LVR DD+E
Sbjct: 129 LVREDDVE 136


>sp|APT_METVS|ADENINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 2 NLVRYDDI 9
+LV+YDD+
Sbjct: 166 SLVKYDDL 173


>sp|Y1632_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 1 PNLVRYDDIE 10
PN+V D+IE
Sbjct: 180 PNIVDLDEIE 189


>sp|REG6_PYRAB|HTH-TYPE transcriptional regulator FL11|Pyrococcus abyssi (strain GE5 /

Query: 2 NLVRYDDI 9
NLV+Y++I
Sbjct: 86 NLVKYEEI 93


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 1 PNLVRYDDI 9
P L RYD I
Sbjct: 170 PELTRYDII 178


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 NLVRYDDIE 10
+L +YDD+E
Sbjct: 11 SLFKYDDLE 19


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 NLVRYDDIE 10
+L +YDD+E
Sbjct: 11 SLFKYDDLE 19


>sp|PRNK_PYRFU|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PF0112|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NLVRYDDIE 10
N+VRY D E
Sbjct: 277 NVVRYFDFE 285


>sp|ARCH_PYRCJ|PROTEIN archease|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 VRYDDIE 10
V YDD+E
Sbjct: 58 VEYDDLE 64


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 VRYDDI 9
VRYDD+
Sbjct: 355 VRYDDV 360


>sp|ARCH_PYRNV|PROTEIN archease|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 VRYDDIE 10
V YDD+E
Sbjct: 58 VEYDDLE 64


>sp|Y954_METJA|UNCHARACTERIZED protein MJ0954|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NLVRYDDIE 10
N V+Y DIE
Sbjct: 102 NKVKYKDIE 110




132|Sequence|656|665|YDDIEGANYF

>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 IEGANYF 10
+EG+NYF
Sbjct: 115 LEGSNYF 121


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DDIEGANYF 10
DD++G +Y+
Sbjct: 23 DDLKGTSYY 31


>sp|HFLX_SACS2|GTPASE HflX|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 IEGANY 9
+EGANY
Sbjct: 20 VEGANY 25


>sp|Y1502_ARCFU|UNCHARACTERIZED protein AF_1502|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YDDIEGANY 9
YDD++ +NY
Sbjct: 32 YDDVDDSNY 40


>sp|PSB_HALMD|PROTEASOME subunit beta|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 YDDIEGA 7
YDD EGA
Sbjct: 230 YDDFEGA 236


>sp|Y004_METJA|UNCHARACTERIZED protein MJ0004|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EGANYF 10
+GANYF
Sbjct: 80 KGANYF 85


>sp|PUS10_PYRFU|TRNA pseudouridine synthase Pus10|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DDIEGAN 8
DD+EG N
Sbjct: 382 DDVEGDN 388


>sp|TBPE_HALSA|TATA-BOX-BINDING protein E|Halobacterium salinarum (strain ATCC 700922

Query: 3 DIEGANY 9
D+EGA+Y
Sbjct: 31 DLEGADY 37


>sp|SPSS2_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DDIEGANYF 10
D+++ +NYF
Sbjct: 349 DEVKKSNYF 357


>sp|TBP1_HALVD|TATA-BOX-BINDING protein 1|Haloferax volcanii (strain ATCC 29605

Query: 3 DIEGANY 9
D+EGA+Y
Sbjct: 31 DLEGADY 37


>sp|Y642_METJA|UNCHARACTERIZED protein MJ0642|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDDIEGANY 9
++++EG NY
Sbjct: 230 FENVEGTNY 238


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDDIEG 6
YDD+EG
Sbjct: 219 YDDVEG 224


>sp|TBP_NATPD|TATA-BOX-BINDING protein|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DIEGANY 9
D+EGA+Y
Sbjct: 31 DLEGADY 37


>sp|DNLJ_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 DDIEGA 7
DDIEGA
Sbjct: 300 DDIEGA 305


>sp|DGGGP_METM6|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 1 YDDIEG 6
Y+DIEG
Sbjct: 176 YEDIEG 181


>sp|LEU3_METJA|3-ISOPROPYLMALATE/3-METHYLMALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDDIEGANYF 10
YDDI+ +Y+
Sbjct: 192 YDDIKAEDYY 201


>sp|TBP_HALMA|TATA-BOX-BINDING protein|Haloarcula marismortui (strain ATCC 43049

Query: 3 DIEGANY 9
D+EGA+Y
Sbjct: 31 DLEGADY 37




133|Sequence|661|670|GANYFQQANE

>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GANYFQQAN 9
G NYFQ+ N
Sbjct: 108 GKNYFQEVN 116


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 3 NYFQQAN 9
NYF+Q+N
Sbjct: 459 NYFEQSN 465


>sp|PYRB_HALMA|ASPARTATE carbamoyltransferase catalytic subunit|Haloarcula marismortui

Query: 2 ANYFQQAN 9
A YFQQA+
Sbjct: 279 AQYFQQAH 286


>sp|RS8E_METM7|SMALL ribosomal subunit protein eS8|Methanococcus maripaludis (strain

Query: 2 ANYFQQANE 10
AN F QAN+
Sbjct: 63 ANVFDQANK 71


>sp|RS8E_METM6|SMALL ribosomal subunit protein eS8|Methanococcus maripaludis (strain

Query: 2 ANYFQQANE 10
AN F QAN+
Sbjct: 63 ANVFDQANK 71


>sp|RS8E_METMP|SMALL ribosomal subunit protein eS8|Methanococcus maripaludis (strain

Query: 2 ANYFQQANE 10
AN F QAN+
Sbjct: 63 ANVFDQANK 71


>sp|PURP_NITMS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GANYFQQANE 10
G YF ANE
Sbjct: 145 GKGYFMAANE 154


>sp|RS8E_METM5|SMALL ribosomal subunit protein eS8|Methanococcus maripaludis (strain

Query: 2 ANYFQQAN 9
AN F QAN
Sbjct: 63 ANVFDQAN 70


>sp|FOLD_PICTO|BIFUNCTIONAL protein FolD|Picrophilus torridus (strain ATCC 700027

Query: 1 GANYFQQANE 10
G NY+ NE
Sbjct: 98 GINYYDVVNE 107




134|Sequence|666|675|QQANELSKLV

***** No hits found ******


135|Sequence|671|680|LSKLVNQQLL

***** No hits found ******


136|Sequence|676|685|NQQLLADPLV

***** No hits found ******


137|Sequence|681|690|ADPLVPPQLT

>sp|GATA_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 3 PLVPPQL 9
P++PP+L
Sbjct: 396 PIIPPKL 402


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ADPLVPPQ 8
A+PLV PQ
Sbjct: 128 ANPLVVPQ 135


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 ADPLVPPQ 8
A+PLV PQ
Sbjct: 127 ANPLVVPQ 134


>sp|WTPA_ARCFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DPLVPPQ 8
+PLVPP+
Sbjct: 321 EPLVPPR 327


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DPLVPPQ 8
DPL PP+
Sbjct: 2 DPLKPPR 8


>sp|CSA3_METJA|CRISPR locus-related putative DNA-binding protein|Methanocaldococcus

Query: 3 PLVPPQL 9
PL+PP +
Sbjct: 139 PLIPPDI 145


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ADPLVPP 7
A+P +PP
Sbjct: 113 AEPFIPP 119


>sp|AROC_METMA|CHORISMATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DPLVPPQL 9
DP +PP++
Sbjct: 329 DPTIPPRM 336


>sp|AROC_METAC|CHORISMATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DPLVPPQL 9
DP +PP++
Sbjct: 329 DPTIPPRM 336


>sp|NCPP_METKA|PROBABLE inosine/xanthosine triphosphatase|Methanopyrus kandleri (strain

Query: 2 DPLVPPQ 8
DP VPPQ
Sbjct: 37 DPGVPPQ 43


>sp|AROC_METBF|CHORISMATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DPLVPPQL 9
DP +PP++
Sbjct: 329 DPTIPPRM 336


>sp|AROC_METTP|CHORISMATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DPLVPPQL 9
DP +PP++
Sbjct: 341 DPSIPPRI 348


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 ADPLVPPQL 9
+D LVPP+L
Sbjct: 255 SDYLVPPEL 263


>sp|AROC_METBU|CHORISMATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DPLVPPQL 9
DP +PP++
Sbjct: 329 DPTIPPRM 336


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 ADPLVPPQL 9
A P++PP++
Sbjct: 400 ASPIMPPRI 408


>sp|DNLJ_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ADPLVPPQ 8
ADPL+P +
Sbjct: 57 ADPLIPDE 64


>sp|AROC_HALLT|CHORISMATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 DPLVPPQ 8
DP++PP+
Sbjct: 342 DPVLPPR 348




138|Sequence|686|695|PPQLTIKDFY

>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPQLTIKD 8
PP LT+KD
Sbjct: 44 PPDLTVKD 51


>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PPQLTIKD 8
PP +TIKD
Sbjct: 44 PPDVTIKD 51


>sp|FAU1_SACI7|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PPQLTIKDF 9
P +TIKDF
Sbjct: 45 PADITIKDF 53


>sp|FAU1_SACI6|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PPQLTIKDF 9
P +TIKDF
Sbjct: 45 PADITIKDF 53


>sp|FAU1_SACI4|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PPQLTIKDF 9
P +TIKDF
Sbjct: 45 PADITIKDF 53


>sp|FAU1_SACI3|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.27)

Query: 1 PPQLTIKDF 9
P +TIKDF
Sbjct: 45 PADITIKDF 53


>sp|FAU1_SACI2|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PPQLTIKDF 9
P +TIKDF
Sbjct: 45 PADITIKDF 53


>sp|FAU1_PYRAR|PROBABLE ribonuclease FAU-1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PPQLTIKD 8
PP +T+KD
Sbjct: 44 PPDITVKD 51


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PPQLTIKD 8
PP +T+KD
Sbjct: 44 PPDITVKD 51


>sp|FAU1_PYRNV|PROBABLE ribonuclease FAU-1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PPQLTIKD 8
PP +T+KD
Sbjct: 44 PPDVTVKD 51


>sp|Y1210_METJA|UNCHARACTERIZED protein MJ1210|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPQLTIKD 8
PPQ+ +KD
Sbjct: 59 PPQVLVKD 66


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 4 LTIKDFY 10
LTI+DFY
Sbjct: 339 LTIRDFY 345


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PQLTIKDFY 10
P+L +KD Y
Sbjct: 25 PKLDLKDIY 33


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 1 PPQLTIKDF 9
PP+ +KDF
Sbjct: 342 PPRKGLKDF 350


>sp|NOP10_METS3|RIBOSOME biogenesis protein Nop10|Methanobrevibacter smithii (strain ATCC

Query: 1 PPQLTIKDFY 10
PP+ +I+D Y
Sbjct: 32 PPKFSIEDKY 41


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 2 PQLTIKDFY 10
P+ T+KD Y
Sbjct: 390 PKETLKDMY 398


>sp|NOP10_ARCFU|RIBOSOME biogenesis protein Nop10|Archaeoglobus fulgidus (strain ATCC

Query: 1 PPQLTIKDFY 10
PP+ +I+D Y
Sbjct: 32 PPRFSIEDPY 41


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 4 LTIKDF 9
LTIKDF
Sbjct: 81 LTIKDF 86


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PQLTIKDFY 10
P +TI D Y
Sbjct: 606 PPMTISDLY 614




139|Sequence|691|700|IKDFYMTDSI

>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 IKDFYMTD 8
I+D YM+D
Sbjct: 503 IRDLYMSD 510


>sp|Y037_METJA|UNCHARACTERIZED protein MJ0037|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKDFYMT 7
IKDFY+T
Sbjct: 7 IKDFYIT 13


>sp|BIOD_NITMS|ATP-DEPENDENT dethiobiotin synthetase BioD|Nitrosopumilus maritimus (strain SCM1)

Query: 1 IKDFYMTDSI 10
+KD+Y+T+ I
Sbjct: 124 LKDYYITNLI 133




140|Sequence|696|705|MTDSISRASQ

***** No hits found ******


141|Sequence|701|710|SRASQTMAKC

***** No hits found ******


142|Sequence|706|715|TMAKCVKAVT

>sp|CAS1A_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MAKCVKAV 9
+A+CVKAV
Sbjct: 219 LAECVKAV 226


>sp|CDC6_METLZ|ORC1-TYPE DNA replication protein|Methanocorpusculum labreanum (strain ATCC

Query: 1 TMAKCVKAV 9
TM++CVK +
Sbjct: 304 TMSECVKTL 312


>sp|MFNA_META3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus aeolicus (strain

Query: 1 TMAKCVKAV 9
++ KCVKA+
Sbjct: 356 SICKCVKAL 364




143|Sequence|711|720|VKAVTEGAQA

>sp|SFSA_PYRIL|SUGAR fermentation stimulation protein homolog|Pyrobaculum islandicum

Query: 2 KAVTEGAQA 10
KAVTEG +A
Sbjct: 160 KAVTEGFEA 168




144|Sequence|716|727|EGAQAVEEPSIC

>sp|PDXT_METPE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosphaerula palustris

Query: 3 AQAVEEPSIC 12
A++VE+P IC
Sbjct: 91 AKSVEDPRIC 100


>sp|GGGPS_METST|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GAQAVEEPSI 11
GAQA+ PSI
Sbjct: 106 GAQALSAPSI 115


>sp|PANB_PYRNV|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EGAQAVEEPSIC 12
E QAV+ P+IC
Sbjct: 188 EVTQAVDVPTIC 199


>sp|PANB_PYRIL|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EGAQAVEEPSIC 12
E QAV+ P+IC
Sbjct: 188 EVTQAVDIPTIC 199


>sp|COFD_METBU|2-PHOSPHO-L-LACTATE transferase|Methanococcoides burtonii (strain DSM 6242

Query: 4 QAVEEPSIC 12
+ +EE SIC
Sbjct: 166 EGIEEASIC 174


>sp|SYH_PYRCJ|HISTIDINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GAQAVEEP 9
G QAVE+P
Sbjct: 325 GLQAVEKP 332


>sp|SRP19_HALSA|SIGNAL recognition particle 19 kDa|Halobacterium salinarum (strain ATCC

Query: 5 AVEEPSI 11
AVEEPSI
Sbjct: 28 AVEEPSI 34


>sp|SRP19_HALS3|SIGNAL recognition particle 19 kDa|Halobacterium salinarum (strain ATCC

Query: 5 AVEEPSI 11
AVEEPSI
Sbjct: 28 AVEEPSI 34


>sp|HIS3_IGNH4|PHOSPHORIBOSYL-AMP cyclohydrolase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EGAQAVEEPS 10
EG VEEPS
Sbjct: 118 EGGVKVEEPS 127


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 3 AQAVEEPSIC 12
+ +E PS+C
Sbjct: 161 GEVIEAPSVC 170






THE END