1|SequenceR|10|1|RGWVAGNASM
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 GWVAGN 7
GWV+GN
Sbjct: 374 GWVSGN 379
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 GWVAGN 7
GWV+GN
Sbjct: 374 GWVSGN 379
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 GWVAGN 7
GWV+GN
Sbjct: 374 GWVSGN 379
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 GWVAGN 7
GWV+GN
Sbjct: 374 GWVSGN 379
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 GWVAGN 7
GWV+GN
Sbjct: 374 GWVSGN 379
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 GWVAGN 7
GWV+GN
Sbjct: 374 GWVSGN 379
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 RGWVAGN 7
+GW+ GN
Sbjct: 400 KGWIPGN 406
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 RGWVAGN 7
+GW+ GN
Sbjct: 400 KGWIPGN 406
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 RGWVAGNAS 9
R WV GN S
Sbjct: 1470 RDWVDGNRS 1478
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 RGWVAGNAS 9
R WV GN S
Sbjct: 1467 RDWVDGNRS 1475
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 GWVAGNA 8
GW+AG+
Sbjct: 954 GWIAGSG 960
>sp|HEMA_I82A2|HEMAGGLUTININ A virus (strain A/Camel/Mongolia/1982
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 56 GWILGN 61
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|HEMA_I86A0|HEMAGGLUTININ A virus (strain A/Taiwan/1/1986
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 248 GWMTGN 253
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 248 GWMTGN 253
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 RGWVAGN 7
R W+ GN
Sbjct: 1118 RNWLQGN 1124
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 RGWVAGN 7
R W+ GN
Sbjct: 1141 RNWLQGN 1147
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 RGWVAGN 7
R W+ GN
Sbjct: 1141 RNWLQGN 1147
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 VAGNAS 9
VAGNAS
Sbjct: 307 VAGNAS 312
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 248 GWMTGN 253
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 248 GWMTGN 253
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 3 WVAGNAS 9
W+ NAS
Sbjct: 452 WITANAS 458
>sp|HEMA_I57A4|HEMAGGLUTININ A virus (strain A/RI/5-/1957
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 74 GWLLGN 79
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 244 GWMTGN 249
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 1 RGWVAG 6
RG+VAG
Sbjct: 382 RGYVAG 387
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 1 RGWVAG 6
RG+VAG
Sbjct: 382 RGYVAG 387
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 1 RGWVAG 6
RG+VAG
Sbjct: 382 RGYVAG 387
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 3 WVAGNAS 9
WVAG+++
Sbjct: 447 WVAGDST 453
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 WVAGNA 8
W+ GNA
Sbjct: 346 WLTGNA 351
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 3 WVAGNA 8
W+ GNA
Sbjct: 346 WLTGNA 351
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWILGN 81
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 3 WVAGNAS 9
WVAG+++
Sbjct: 451 WVAGDST 457
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 71 GWLLGN 76
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 74 GWLLGN 79
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 244 GWMTGN 249
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 75 GWLLGN 80
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 75 GWLLGN 80
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 75 GWLLGN 80
>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D
Query: 3 WVAGN 7
WV GN
Sbjct: 71 WVGGN 75
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 75 GWLLGN 80
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 75 GWLLGN 80
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 75 GWLLGN 80
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 75 GWLLGN 80
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 75 GWLLGN 80
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 75 GWLLGN 80
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 75 GWLLGN 80
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 73 GWLLGN 78
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 64 GWLLGN 69
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 3 WVAGNAS 9
W+ GN S
Sbjct: 1557 WLTGNPS 1563
>sp|VE8E2_HPV08|PROTEIN E8^E2C|Human papillomavirus type 8
Query: 3 WVAGNAS 9
WVAG+++
Sbjct: 260 WVAGDST 266
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 75 GWLLGN 80
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 75 GWLLGN 80
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 64 GWLLGN 69
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 64 GWLLGN 69
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 WVAGNAS 9
WV GN S
Sbjct: 2139 WVNGNPS 2145
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 64 GWLLGN 69
>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2
Query: 3 WVAGN 7
WV GN
Sbjct: 71 WVGGN 75
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWLLGN 81
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 67 GWLLGN 72
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWLLGN 81
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 74 GWLLGN 79
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWLLGN 81
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWLLGN 81
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWLLGN 81
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 74 GWLLGN 79
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 3 WVAGNAS 9
WVAG+ +
Sbjct: 462 WVAGDGT 468
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 3 WVAGNAS 9
WVAG+ +
Sbjct: 456 WVAGDGT 462
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWLLGN 81
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 74 GWLLGN 79
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWLLGN 81
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 74 GWLLGN 79
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 3 WVAGNA 8
WVAG++
Sbjct: 459 WVAGDS 464
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWLLGN 81
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 2 GWVAGN 7
GW+ GN
Sbjct: 76 GWLLGN 81
2|SequenceR|15|6|LRSRVRGWVA
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 RVRGWVA 10
RVRGWV
Sbjct: 6019 RVRGWVG 6025
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 RVRGWVA 10
RVRGWV
Sbjct: 6039 RVRGWVG 6045
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 RVRGWVA 10
RVRGWV
Sbjct: 6069 RVRGWVG 6075
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 LRSRVRGWVA 10
+RS +RGW
Sbjct: 124 VRSFIRGWTG 133
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 RVRGWVA 10
RVR WV
Sbjct: 5981 RVRAWVG 5987
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 5 VRGWV 9
VRGWV
Sbjct: 98 VRGWV 102
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 LRSRVRGW 8
L SRVRG+
Sbjct: 533 LHSRVRGF 540
>sp|PG191_MONPV|PROTEIN OPG191|Monkeypox virus (MPXV)
Query: 3 SRVRGWV 9
SRV+ WV
Sbjct: 62 SRVKQWV 68
>sp|PG191_VACCC|PROTEIN OPG191|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SRVRGWV 9
SRV+ WV
Sbjct: 62 SRVKQWV 68
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 LRSRVRGW 8
L SR+RG+
Sbjct: 536 LHSRIRGF 543
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 LRSRVRGWV 9
L RVR W+
Sbjct: 516 LPGRVRNWL 524
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 3 SRVRGWV 9
+RV GWV
Sbjct: 235 TRVEGWV 241
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 5 VRGWV 9
+RGW+
Sbjct: 101 IRGWI 105
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 SRVRGWV 9
+RV GWV
Sbjct: 235 TRVEGWV 241
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 SRVRGWV 9
+RV GWV
Sbjct: 235 TRVEGWV 241
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 SRVRGWV 9
+RV GWV
Sbjct: 235 TRVEGWV 241
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 SRVRGWV 9
+RV GWV
Sbjct: 235 TRVEGWV 241
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 SRVRGWV 9
+RV GWV
Sbjct: 235 TRVEGWV 241
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 SRVRGWV 9
+RV GWV
Sbjct: 235 TRVEGWV 241
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 SRVRGWV 9
+RV GWV
Sbjct: 235 TRVEGWV 241
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 SRVRGWV 9
+RV GWV
Sbjct: 236 TRVEGWV 242
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 SRVRGWV 9
+RV GWV
Sbjct: 236 TRVEGWV 242
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 VRGWVA 10
VRGW+
Sbjct: 5650 VRGWLG 5655
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 VRGWVA 10
VRGW+
Sbjct: 5675 VRGWLG 5680
>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RSRVRGW 8
R+R+R W
Sbjct: 10 RNRIRWW 16
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 4 RVRGWV 9
R+R WV
Sbjct: 242 RIRSWV 247
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 4 RVRGWV 9
R+R WV
Sbjct: 242 RIRSWV 247
3|SequenceR|20|11|EPFARLRSRV
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 PFARLRSRV 10
PF+ LR+RV
Sbjct: 435 PFSILRTRV 443
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 PFARLRSRV 10
PF+ LR+RV
Sbjct: 435 PFSILRTRV 443
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 PFARLRSRV 10
PF+ LR+RV
Sbjct: 435 PFSILRTRV 443
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 PFARLRSRV 10
PF+ LR+RV
Sbjct: 436 PFSILRTRV 444
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 1 EPFARLRSRV 10
+P AR SRV
Sbjct: 100 DPLARYGSRV 109
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 1 EPFARLRSRV 10
+P AR SRV
Sbjct: 100 DPLARYGSRV 109
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 1 EPFARLRSRV 10
+P AR SRV
Sbjct: 99 DPLARYGSRV 108
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 4 ARLRSRV 10
RLRSRV
Sbjct: 241 GRLRSRV 247
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 ARLRSRV 10
RLRSRV
Sbjct: 241 GRLRSRV 247
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 1 EPFARLRS 8
+PFARL +
Sbjct: 203 KPFARLSA 210
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 ARLRSRV 10
RLRSRV
Sbjct: 241 GRLRSRV 247
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 ARLRSRV 10
RLRSRV
Sbjct: 241 GRLRSRV 247
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 1 EPFARLRSRV 10
+P AR SRV
Sbjct: 131 DPLARYGSRV 140
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 1 EPFARLRSRV 10
+P AR SRV
Sbjct: 131 DPLARYGSRV 140
4|SequenceR|25|16|CAALREPFAR
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 AALREPF 8
AA+REPF
Sbjct: 112 AAIREPF 118
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 2 AALREPFA 9
AAL EPF+
Sbjct: 63 AALGEPFS 70
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 2 AALREPFA 9
AAL EPF+
Sbjct: 63 AALGEPFS 70
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LREPFAR 10
LR PF+R
Sbjct: 987 LRSPFSR 993
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LREPFAR 10
LR PF+R
Sbjct: 987 LRSPFSR 993
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CAALRE 6
CAAL+E
Sbjct: 3505 CAALKE 3510
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CAALRE 6
CAAL+E
Sbjct: 3505 CAALKE 3510
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 AALREPFA 9
AAL+ PFA
Sbjct: 892 AALQIPFA 899
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 AALREPFA 9
AAL+ PFA
Sbjct: 874 AALQIPFA 881
>sp|GN_EBVG|ENVELOPE glycoprotein N|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 LREPFAR 10
LR+PFA+
Sbjct: 5 LRKPFAK 11
>sp|GN_EBVB9|ENVELOPE glycoprotein N|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 LREPFAR 10
LR+PFA+
Sbjct: 5 LRKPFAK 11
>sp|GN_EBVA8|ENVELOPE glycoprotein N|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 LREPFAR 10
LR+PFA+
Sbjct: 5 LRKPFAK 11
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 CAALRE 6
CAAL+E
Sbjct: 530 CAALKE 535
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 LREPFAR 10
L+EP+A+
Sbjct: 99 LKEPYAK 105
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 CAALREPF 8
A LR+PF
Sbjct: 523 SAVLRQPF 530
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 CAALRE 6
CAAL+E
Sbjct: 530 CAALKE 535
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 LREPFAR 10
L+EP+A+
Sbjct: 99 LKEPYAK 105
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 CAALREPF 8
A LR+PF
Sbjct: 523 SAVLRQPF 530
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 CAALREPF 8
A LR+PF
Sbjct: 523 SAVLRQPF 530
5|SequenceR|30|21|AAEAGCAALR
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 AAEAGCAAL 9
AAEA C ++
Sbjct: 952 AAEASCVSI 960
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 AAEAGCAAL 9
AAEA C ++
Sbjct: 952 AAEASCVSI 960
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 EAGCA 7
EAGCA
Sbjct: 1326 EAGCA 1330
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 EAGCA 7
EAGCA
Sbjct: 1326 EAGCA 1330
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 EAGCA 7
EAGCA
Sbjct: 1326 EAGCA 1330
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 EAGCA 7
EAGCA
Sbjct: 1326 EAGCA 1330
6|SequenceR|35|26|CRGYAAAEAG
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 1 CRGYAAAE 8
CR Y AAE
Sbjct: 410 CRHYKAAE 417
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 CRGYAAAE 8
CR Y AAE
Sbjct: 407 CRHYKAAE 414
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 CRGYAAAEAG 10
CR + A EAG
Sbjct: 916 CRVHKAKEAG 925
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 3 GYAAAEAG 10
GY+ EAG
Sbjct: 138 GYSEVEAG 145
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 3 GYAAAEAG 10
GY+ EAG
Sbjct: 138 GYSEVEAG 145
7|SequenceR|40|31|TSAQVCRGYA
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 16 SDQICIGY 23
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 16 SDQICIGY 23
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 16 SDQICIGY 23
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 16 SDQICIGY 23
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 16 SDQICIGY 23
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 16 SDQICIGY 23
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 16 SDQICIGY 23
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 12 SDQICIGY 19
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 16 SDQICIGY 23
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 16 SDQICIGY 23
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 16 SDQICIGY 23
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 16 SDQICIGY 23
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 14 SDQICIGY 21
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 5 SDQICIGY 12
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 5 SDQICIGY 12
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 5 SDQICIGY 12
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 5 SDQICIGY 12
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 16 SDQICIGY 23
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 SAQVCRGY 9
S Q+C GY
Sbjct: 8 SDQICIGY 15
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 6 CRGY 9
CRGY
Sbjct: 237 CRGY 240
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 6 CRGY 9
CRGY
Sbjct: 237 CRGY 240
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 QVCRGY 9
+CRGY
Sbjct: 157 DLCRGY 162
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 4 QVCRGY 9
+CRGY
Sbjct: 157 DLCRGY 162
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 4 QVCRGY 9
+CRGY
Sbjct: 157 DLCRGY 162
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TSAQVCRGYA 10
TSA + RG A
Sbjct: 1192 TSAGIARGQA 1201
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 4 QVCRGY 9
Q+C GY
Sbjct: 17 QICIGY 22
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 4 QVCRGY 9
Q+C GY
Sbjct: 17 QICIGY 22
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 4 QVCRGY 9
Q+C GY
Sbjct: 17 QICIGY 22
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 4 QVCRGY 9
Q+C GY
Sbjct: 17 QICIGY 22
>sp|HEMA_I57A4|HEMAGGLUTININ A virus (strain A/RI/5-/1957
Query: 4 QVCRGY 9
Q+C GY
Sbjct: 17 QICIGY 22
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 4 QVCRGY 9
Q+C GY
Sbjct: 17 QICIGY 22
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 4 QVCRGY 9
+CRGY
Sbjct: 157 DLCRGY 162
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 4 QVCRGY 9
+CRGY
Sbjct: 157 DLCRGY 162
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 5 VCRGY 9
+CRGY
Sbjct: 158 LCRGY 162
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 VCRGY 9
+CRGY
Sbjct: 158 LCRGY 162
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 5 VCRGY 9
+CRGY
Sbjct: 158 LCRGY 162
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 4 QVCRGY 9
+CRGY
Sbjct: 157 DLCRGY 162
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 4 QVCRGY 9
+CRGY
Sbjct: 157 DLCRGY 162
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 4 QVCRGY 9
+CRGY
Sbjct: 157 DLCRGY 162
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 SAQVCRGYA 10
SA VC YA
Sbjct: 815 SAFVCSNYA 823
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 SAQVCRGYA 10
SA VC YA
Sbjct: 815 SAFVCSNYA 823
8|SequenceR|45|36|RGGPATSAQV
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 RGGPATSA 8
R GPATSA
Sbjct: 101 RNGPATSA 108
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 1 RGGPATSA 8
R GP TSA
Sbjct: 101 RNGPTTSA 108
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 RGGPATSA 8
R GP TSA
Sbjct: 101 RNGPTTSA 108
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 1 RGGPATSA 8
R GP TSA
Sbjct: 101 RNGPTTSA 108
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 RGGPATSA 8
R GP TSA
Sbjct: 101 RNGPTTSA 108
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 RGGPATSA 8
R GP TSA
Sbjct: 101 RNGPTTSA 108
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 RGGPATSA 8
R GP TSA
Sbjct: 100 RNGPTTSA 107
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 1 RGGPATSA 8
R GP TSA
Sbjct: 101 RNGPTTSA 108
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 3 GPATSAQV 10
G ATSAQ+
Sbjct: 121 GVATSAQI 128
>sp|M2_I59A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 RGGPATSA 8
+GGP+T
Sbjct: 60 KGGPSTEG 67
>sp|M2_I34A1|MATRIX protein 2|Influenza A virus (strain A/Puerto
Query: 1 RGGPATSA 8
+GGP+T
Sbjct: 60 KGGPSTEG 67
>sp|M2_I06A0|MATRIX protein 2|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 RGGPATSA 8
+GGP+T
Sbjct: 60 KGGPSTEG 67
>sp|M2_I000X|MATRIX protein 2|Influenza A virus (strain A/X-31
Query: 1 RGGPATSA 8
+GGP+T
Sbjct: 60 KGGPSTEG 67
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 2 GGPATSAQV 10
G P TSA++
Sbjct: 313 GDPLTSAKI 321
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 RGGPATS 7
R GP TS
Sbjct: 95 RNGPTTS 101
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 RGGPATS 7
R GP TS
Sbjct: 101 RNGPTTS 107
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 1 RGGPATS 7
R GP TS
Sbjct: 101 RNGPTTS 107
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 GGPATS 7
GGP+TS
Sbjct: 490 GGPSTS 495
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 RGGPATS 7
R GP TS
Sbjct: 101 RNGPTTS 107
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 RGGPATS 7
R GP TS
Sbjct: 101 RNGPTTS 107
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 1 RGGPATS 7
R GP TS
Sbjct: 93 RNGPTTS 99
9|SequenceR|50|41|FDKSLRGGPA
>sp|M2_I06A0|MATRIX protein 2|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 FDKSLRGGPA 10
F L+GGP+
Sbjct: 55 FKYGLKGGPS 64
>sp|M2_I34A1|MATRIX protein 2|Influenza A virus (strain A/Puerto
Query: 1 FDKSLRGGPA 10
F L+GGP+
Sbjct: 55 FKYGLKGGPS 64
>sp|M2_I000X|MATRIX protein 2|Influenza A virus (strain A/X-31
Query: 1 FDKSLRGGPA 10
F L+GGP+
Sbjct: 55 FKYGLKGGPS 64
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 KSLRGGP 9
KS+RG P
Sbjct: 2456 KSIRGSP 2462
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FDKSLRG 7
FD+ LRG
Sbjct: 335 FDRGLRG 341
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FDKSLRG 7
FD+ LRG
Sbjct: 335 FDRGLRG 341
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 DKSLRG 7
D+SLRG
Sbjct: 1669 DRSLRG 1674
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 FDKSLRGGP 9
FD S+ GP
Sbjct: 1431 FDYSVSAGP 1439
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 FDKSLRGGP 9
FD S+ GP
Sbjct: 1428 FDYSVSAGP 1436
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 FDKSLRGGP 9
FD S+ GP
Sbjct: 1430 FDYSVSAGP 1438
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 1 FDKSLRGGP 9
FD S+ GP
Sbjct: 1430 FDYSVSAGP 1438
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 FDKSLRGGP 9
FD S+ GP
Sbjct: 1430 FDYSVSAGP 1438
>sp|PG155_VARV|ENVELOPE protein OPG155|Variola virus
Query: 1 FDKSLRGGPA 10
+ KS+ G PA
Sbjct: 45 YSKSIGGTPA 54
>sp|PG155_VAR67|ENVELOPE protein OPG155|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 FDKSLRGGPA 10
+ KS+ G PA
Sbjct: 45 YSKSIGGTPA 54
>sp|PG155_VACCC|ENVELOPE protein OPG155|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FDKSLRGGPA 10
+ KS+ G PA
Sbjct: 45 YSKSIGGTPA 54
>sp|PG155_VACCA|ENVELOPE protein OPG155|Vaccinia virus (strain Ankara) (VACV)
Query: 1 FDKSLRGGPA 10
+ KS+ G PA
Sbjct: 45 YSKSIGGTPA 54
>sp|PG155_MONPZ|ENVELOPE protein OPG155|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 FDKSLRGGPA 10
+ KS+ G PA
Sbjct: 45 YSKSIGGTPA 54
>sp|PG155_MONPV|ENVELOPE protein OPG155|Monkeypox virus (MPXV)
Query: 1 FDKSLRGGPA 10
+ KS+ G PA
Sbjct: 45 YSKSIGGTPA 54
>sp|PG155_CWPXG|ENVELOPE protein OPG155|Cowpox virus (strain GRI-90 /
Query: 1 FDKSLRGGPA 10
+ KS+ G PA
Sbjct: 45 YSKSIGGTPA 54
>sp|PG155_CWPXB|ENVELOPE protein OPG155|Cowpox virus (strain Brighton Red)
Query: 1 FDKSLRGGPA 10
+ KS+ G PA
Sbjct: 45 YSKSIGGTPA 54
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 2 DKSLRGGPA 10
D+SL G PA
Sbjct: 188 DESLAGTPA 196
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 4 SLRGGPA 10
++RGGPA
Sbjct: 1220 AVRGGPA 1226
10|SequenceR|55|46|FERACFDKSL
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 FERACFDK 8
F+ ACFDK
Sbjct: 667 FKGACFDK 674
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 FERACF 6
FERAC
Sbjct: 1213 FERACL 1218
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 FERACF 6
FERAC
Sbjct: 1213 FERACL 1218
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FERACFDKSL 10
FER C+ S+
Sbjct: 185 FERECYRVSV 194
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FERACFDKSL 10
FER C+ S+
Sbjct: 185 FERECYRVSV 194
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 RACFDKSL 10
R C DK L
Sbjct: 1704 RQCIDKRL 1711
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 RACFDKSL 10
R C DK L
Sbjct: 1704 RECIDKRL 1711
>sp|ORF24_TTVV6|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 4 ACFDKSL 10
ACFD+ +
Sbjct: 258 ACFDRPM 264
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FERACF 6
++RACF
Sbjct: 89 WQRACF 94
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FERACF 6
++RACF
Sbjct: 89 WQRACF 94
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 ERACFDK 8
E+AC +K
Sbjct: 165 EKACLEK 171
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 ERACFDK 8
E+AC +K
Sbjct: 165 EKACLEK 171
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 2 ERACFDK 8
E+AC +K
Sbjct: 165 EKACLEK 171
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 ERACFDK 8
E+AC +K
Sbjct: 165 EKACLEK 171
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 2 ERACFDK 8
E+AC +K
Sbjct: 165 EKACLEK 171
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 2 ERACFDK 8
E+AC +K
Sbjct: 165 EKACLEK 171
>sp|HEMA_CVHN1|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N1)
Query: 5 CFDKS 9
CFDKS
Sbjct: 246 CFDKS 250
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 4 ACFDKSL 10
AC+DK++
Sbjct: 193 ACYDKTI 199
11|SequenceR|60|51|SRLAEFERAC
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 LAEFERAC 10
+ EFERAC
Sbjct: 1210 MKEFERAC 1217
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 LAEFERAC 10
+ EFERAC
Sbjct: 1210 MKEFERAC 1217
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 RLAEFERAC 10
RL FE AC
Sbjct: 2513 RLLSFEEAC 2521
>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)
Query: 3 LAEFERAC 10
LAE++R C
Sbjct: 60 LAEYDRRC 67
>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)
Query: 3 LAEFERAC 10
LAE++R C
Sbjct: 100 LAEYDRRC 107
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 3 LAEFERAC 10
LAE+ R C
Sbjct: 139 LAEYNRRC 146
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 3 LAEFERAC 10
A FE AC
Sbjct: 317 FANFEAAC 324
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SRLAEFERAC 10
S + +FER C
Sbjct: 180 SDIEDFEREC 189
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SRLAEFERAC 10
S + +FER C
Sbjct: 180 SDIEDFEREC 189
12|SequenceR|65|56|AAAFCSRLAE
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 AAAFCSRL 8
AAAFCS +
Sbjct: 268 AAAFCSAM 275
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 AAAFCSRL 8
AAAFCS +
Sbjct: 268 AAAFCSAM 275
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 AAAFCSRL 8
AAAFCS +
Sbjct: 268 AAAFCSAM 275
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 AAAFCSRL 8
AAAFCS +
Sbjct: 268 AAAFCSAM 275
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 AAAFCSRL 8
AAAFCS +
Sbjct: 268 AAAFCSAM 275
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 AAAFCSRL 8
AAAFCS +
Sbjct: 268 AAAFCSAM 275
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 AAAFCSRL 8
AAAFCS +
Sbjct: 268 AAAFCSAM 275
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 AAAFCSRL 8
AAAFCS +
Sbjct: 268 AAAFCSAM 275
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 4 FCSRLA 9
FC+RLA
Sbjct: 580 FCNRLA 585
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 AAAFCSRL 8
AAFCS L
Sbjct: 268 GAAFCSAL 275
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 1 AAAFCSRLAE 10
AA C RLAE
Sbjct: 444 AAVGCQRLAE 453
>sp|VP6_ROTHG|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 2 AAFCSRLAE 10
AAF S LAE
Sbjct: 191 AAFDSTLAE 199
>sp|VP6_ROTHF|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate
Query: 2 AAFCSRLAE 10
AAF S LAE
Sbjct: 191 AAFDSTLAE 199
>sp|VP6_ROTHC|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 2 AAFCSRLAE 10
AAF S LAE
Sbjct: 191 AAFDSTLAE 199
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AAFCSRL 8
AAFCS +
Sbjct: 269 AAFCSAM 275
13|SequenceR|74|61|CGGELTKKAAAAFC
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 CGGELTKKAAAA 12
C G+ +++AAAA
Sbjct: 338 CAGKSSEQAAAA 349
>sp|VE6_HPV29|PROTEIN E6|Human papillomavirus 29
Query: 1 CGGELTKKAAAAFC 14
C ELT AAFC
Sbjct: 32 CTKELTSPELAAFC 45
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 GGELTKKAAAA 12
GGE K+ AAA
Sbjct: 647 GGEAPKRPAAA 657
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 GGELTKKAAAA 12
GGE K+ AAA
Sbjct: 647 GGEAPKRPAAA 657
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 GGELTKKAAAA 12
GGE K+ AAA
Sbjct: 647 GGEAPKRPAAA 657
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 GGELTKKAAAA 12
GGE K+ AAA
Sbjct: 647 GGEAPKRPAAA 657
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 1 CGGELTKKAAAA 12
C G +++AAAA
Sbjct: 338 CAGNSSEQAAAA 349
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 5 LTKKAAAAF 13
LTK A AAF
Sbjct: 2318 LTKSACAAF 2326
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 CGGELTKKAAA 11
CGG T AAA
Sbjct: 362 CGGITTITAAA 372
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 CGGELTKKAAA 11
CGG T AAA
Sbjct: 362 CGGITTITAAA 372
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 CGGELTKKAAAA 12
CG +TK + +A
Sbjct: 2814 CGSYITKTSGSA 2825
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 CGGELTKKAAAA 12
CG +TK + +A
Sbjct: 2814 CGSYITKTSGSA 2825
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 LTKKAAAAF 13
LT+ A AAF
Sbjct: 2318 LTRSACAAF 2326
>sp|PAX_I96A2|PROTEIN PA-X|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 CGGELTKKA 9
C G LTK +
Sbjct: 211 CAGSLTKAS 219
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 CGGELTKKAAAA 12
CG +TK + +A
Sbjct: 2813 CGSYVTKTSGSA 2824
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 CGGELTKKAAAA 12
CG +TK + +A
Sbjct: 2814 CGSYVTKTSGSA 2825
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 CGGELTKKAAAA 12
CG +TK + +A
Sbjct: 2813 CGSYVTKTSGSA 2824
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 CGGELTKKAAAA 12
CG +TK + +A
Sbjct: 2813 CGSYVTKTSGSA 2824
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 CGGELTKKAAAA 12
CG +TK + +A
Sbjct: 2813 CGSYVTKTSGSA 2824
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 CGGELTKKAAAA 12
CG +TK + +A
Sbjct: 2813 CGSYVTKTSGSA 2824
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 CGGELTKKAAAA 12
CG +TK + +A
Sbjct: 2813 CGSYVTKTSGSA 2824
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 7 KKAAAAFC 14
+KAA FC
Sbjct: 464 RKAATKFC 471
>sp|PAX_I83A1|PROTEIN PA-X|Influenza A virus (strain A/Chile/1/1983
Query: 1 CGGELTK 7
C G LTK
Sbjct: 211 CAGSLTK 217
>sp|PAX_I80AA|PROTEIN PA-X|Influenza A virus (strain A/India/6263/1980
Query: 1 CGGELTK 7
C G LTK
Sbjct: 211 CAGSLTK 217
>sp|PAX_I54A2|PROTEIN PA-X|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 CGGELTK 7
C G LTK
Sbjct: 211 CAGSLTK 217
>sp|PAX_I51A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 CGGELTK 7
C G LTK
Sbjct: 211 CAGSLTK 217
>sp|PAX_I96A3|PROTEIN PA-X|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 CGGELTK 7
C G LTK
Sbjct: 211 CAGSLTK 217
>sp|PAX_I00A1|PROTEIN PA-X|Influenza A virus (strain A/New
Query: 1 CGGELTK 7
C G LTK
Sbjct: 211 CAGSLTK 217
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 4 ELTKKAAAA 12
+LTK+A AA
Sbjct: 191 DLTKRALAA 199
THE END