1|Sequence|1|10|MSANGAVWGR
>sp|U23_HHV6U|GLYCOPROTEIN U23|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SANGAVWGR 10
SAN WG+
Sbjct: 58 SANSETWGK 66
>sp|GL_VZVO|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Oka vaccine)
Query: 4 NGAVWG 9
NG VWG
Sbjct: 145 NGCVWG 150
>sp|GL_VZVD|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 NGAVWG 9
NG VWG
Sbjct: 144 NGCVWG 149
>sp|U23_HHV6Z|PROTEIN U23|Human herpesvirus 6B (strain Z29)
Query: 2 SANGAVWGR 10
SAN WG+
Sbjct: 120 SANPETWGK 128
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 SANGAVW 8
S NG +W
Sbjct: 102 SCNGVIW 108
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 2 SANGAVW 8
S NG +W
Sbjct: 102 SCNGVIW 108
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SANGAVW 8
S NG +W
Sbjct: 102 SCNGVIW 108
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SANGAVW 8
S NG +W
Sbjct: 102 SCNGVIW 108
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 2 SANGAVW 8
S NG +W
Sbjct: 102 SCNGVIW 108
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 2 SANGAVW 8
S NG +W
Sbjct: 102 SCNGVIW 108
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 SANGAVW 8
SANG +W
Sbjct: 765 SANGPLW 771
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 SANGAVW 8
SANG +W
Sbjct: 765 SANGPLW 771
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 4 NGAVWG 9
NG +WG
Sbjct: 330 NGILWG 335
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 4 NGAVWG 9
NG +WG
Sbjct: 331 NGILWG 336
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 4 NGAVWG 9
NG +WG
Sbjct: 331 NGILWG 336
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 4 NGAVWG 9
NG +WG
Sbjct: 331 NGILWG 336
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 4 NGAVWG 9
NG +WG
Sbjct: 331 NGILWG 336
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 2 SANGAVWG 9
+AN ++WG
Sbjct: 124 AANASLWG 131
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 MSANGAVW 8
+SAN A W
Sbjct: 1425 VSANSAQW 1432
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 5 GAVWGR 10
G+VW R
Sbjct: 639 GSVWNR 644
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 5 GAVWGR 10
G+VW R
Sbjct: 639 GSVWNR 644
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 MSANGAVWG 9
+ ANG V+G
Sbjct: 5407 LCANGQVFG 5415
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 MSANGAVWG 9
+ ANG V+G
Sbjct: 5384 LCANGQVFG 5392
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 MSANGAVWGR 10
M NG V+G+
Sbjct: 331 MCLNGFVYGK 340
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 4 NGAVWG 9
NG WG
Sbjct: 333 NGMCWG 338
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 4 NGAVWG 9
NG WG
Sbjct: 332 NGMCWG 337
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 4 NGAVWG 9
NG WG
Sbjct: 426 NGMCWG 431
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 4 NGAVWG 9
NG WG
Sbjct: 322 NGICWG 327
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 4 NGAVWG 9
NG WG
Sbjct: 351 NGICWG 356
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 4 NGAVWG 9
NG WG
Sbjct: 326 NGICWG 331
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 4 NGAVWG 9
NG WG
Sbjct: 347 NGICWG 352
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 4 NGAVWG 9
NG WG
Sbjct: 355 NGICWG 360
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 4 NGAVWG 9
NG WG
Sbjct: 317 NGICWG 322
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 4 NGAVWG 9
NG WG
Sbjct: 315 NGICWG 320
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 4 NGAVWG 9
NG WG
Sbjct: 352 NGICWG 357
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 4 NGAVWG 9
NG WG
Sbjct: 326 NGICWG 331
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 4 NGAVWG 9
NG WG
Sbjct: 317 NGICWG 322
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 4 NGAVWG 9
NG WG
Sbjct: 321 NGICWG 326
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 4 NGAVWG 9
NG WG
Sbjct: 322 NGICWG 327
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 4 NGAVWG 9
NG WG
Sbjct: 328 NGICWG 333
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 4 NGAVWG 9
NG WG
Sbjct: 321 NGICWG 326
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 4 NGAVWG 9
NG WG
Sbjct: 321 NGICWG 326
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 4 NGAVWG 9
NG WG
Sbjct: 315 NGICWG 320
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 MSANGAVWG 9
+ ANG V+G
Sbjct: 5393 LCANGLVFG 5401
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 4 NGAVWG 9
NG WG
Sbjct: 318 NGICWG 323
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 4 NGAVWG 9
NG WG
Sbjct: 317 NGICWG 322
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 4 NGAVWG 9
NG WG
Sbjct: 317 NGICWG 322
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 4 NGAVWG 9
NG WG
Sbjct: 321 NGICWG 326
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 4 NGAVWG 9
NG WG
Sbjct: 321 NGICWG 326
2|Sequence|6|15|AVWGRVRSRL
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 AVWGRV 6
A+WG+V
Sbjct: 645 ALWGKV 650
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 AVWGRV 6
A WGR+
Sbjct: 130 ATWGRI 135
>sp|NP_ADE04|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus E serotype 4
Query: 1 AVWGRVRSR 9
A+ GRVRSR
Sbjct: 46 ALKGRVRSR 54
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 AVWGRV 6
A WGR+
Sbjct: 130 ATWGRI 135
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 AVWGRV 6
A WGR+
Sbjct: 130 ATWGRI 135
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 AVWGRV 6
A WGR+
Sbjct: 130 ATWGRI 135
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 VWGRV 6
+WGRV
Sbjct: 991 IWGRV 995
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 WGRVRSRL 10
W R+R L
Sbjct: 1466 WARIRKAL 1473
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 WGRVRSRL 10
W R+R L
Sbjct: 1444 WARIRKAL 1451
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 WGRVRSRL 10
W R+R L
Sbjct: 1439 WARIRKAL 1446
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 4 GRVRSRL 10
GR+RSR+
Sbjct: 241 GRLRSRV 247
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 GRVRSRL 10
GR+RSR+
Sbjct: 241 GRLRSRV 247
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 GRVRSRL 10
GR+RSR+
Sbjct: 241 GRLRSRV 247
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 GRVRSRL 10
GR+RSR+
Sbjct: 241 GRLRSRV 247
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 AVWGRV 6
A WGR+
Sbjct: 922 APWGRI 927
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 VWGRV 6
+WGR+
Sbjct: 993 IWGRI 997
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 VWGRV 6
+WGR+
Sbjct: 992 IWGRI 996
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 VWGRV 6
+WGR+
Sbjct: 990 IWGRI 994
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 VWGRV 6
+WGR+
Sbjct: 992 IWGRI 996
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 VWGRV 6
+WGR+
Sbjct: 993 IWGRI 997
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 VWGRV 6
+WGR+
Sbjct: 992 IWGRI 996
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 VWGRV 6
+WGR+
Sbjct: 991 IWGRI 995
3|Sequence|11|20|VRSRLRAFPE
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 SRLRAFPE 10
SRLR+FP+
Sbjct: 1967 SRLRSFPK 1974
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 VRSRLRAFP 9
++S+LR++P
Sbjct: 72 IKSKLRSYP 80
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 VRSRLRAFP 9
++S+LR++P
Sbjct: 72 IKSKLRSYP 80
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 VRSRLRAFP 9
++S+LR++P
Sbjct: 72 IKSKLRSYP 80
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 2 RSRLRAFPE 10
RSRL +PE
Sbjct: 70 RSRLNLWPE 78
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 1 VRSRLRAF 8
+RSR++AF
Sbjct: 532 LRSRVQAF 539
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 VRSRLRAF 8
V+SR++AF
Sbjct: 1139 VKSRVQAF 1146
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 SRLRAFPE 10
++LR+FP+
Sbjct: 2053 AKLRSFPK 2060
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 SRLRAFPE 10
++LR+FP+
Sbjct: 2030 AKLRSFPK 2037
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 SRLRAFPE 10
++LR+FP+
Sbjct: 2033 AKLRSFPK 2040
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 RSRLRAFPE 10
R +RAFP+
Sbjct: 894 RFLIRAFPD 902
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 RSRLRAFPE 10
R +RAFP+
Sbjct: 894 RFLIRAFPD 902
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 RSRLRAFPE 10
R +RAFP+
Sbjct: 894 RFLIRAFPD 902
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 RSRLRAFPE 10
R +RAFP+
Sbjct: 894 RFLIRAFPD 902
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 RSRLRAFPE 10
R +RAFP+
Sbjct: 894 RFLIRAFPD 902
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 RSRLRAFPE 10
R +RAFP+
Sbjct: 894 RFLIRAFPD 902
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 RSRLRAFPE 10
R +RAFP+
Sbjct: 894 RFLIRAFPD 902
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 SRLRAFPE 10
S+LR++P+
Sbjct: 2069 SKLRSYPK 2076
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 SRLRAFPE 10
S+LR++P+
Sbjct: 2070 SKLRSYPK 2077
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 SRLRAFPE 10
S+LR++P+
Sbjct: 2069 SKLRSYPK 2076
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 SRLRAFPE 10
++LR+FP+
Sbjct: 2052 AKLRSFPK 2059
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 SRLRAFPE 10
S+LR++P+
Sbjct: 2030 SKLRSYPK 2037
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 SRLRAFPE 10
S+LR++P+
Sbjct: 2030 SKLRSYPK 2037
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 SRLRAFPE 10
++LR+FP+
Sbjct: 2058 AKLRSFPK 2065
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 SRLRAFPE 10
++LR+FP+
Sbjct: 2052 AKLRSFPK 2059
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 SRLRAFPE 10
++LR+FP+
Sbjct: 2044 AKLRSFPK 2051
4|Sequence|16|25|RAFPERLAAC
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 PERLAAC 10
PERLAAC
Sbjct: 453 PERLAAC 459
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 PERLAAC 10
PER+AAC
Sbjct: 452 PERMAAC 458
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 PERLAAC 10
PERL+AC
Sbjct: 453 PERLSAC 459
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PERLAAC 10
PERLA+C
Sbjct: 453 PERLASC 459
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 PERLAAC 10
PERLA+C
Sbjct: 453 PERLASC 459
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 4 PERLAAC 10
PERL+AC
Sbjct: 452 PERLSAC 458
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PERLAAC 10
PERLA+C
Sbjct: 453 PERLASC 459
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 PERLAAC 10
PERLA+C
Sbjct: 453 PERLASC 459
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 4 PERLAAC 10
PERLA+C
Sbjct: 453 PERLASC 459
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 PERLAAC 10
PER++AC
Sbjct: 453 PERMSAC 459
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 PERLAAC 10
PER+A+C
Sbjct: 453 PERMASC 459
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 PERLAAC 10
PER+A+C
Sbjct: 453 PERMASC 459
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PERLAAC 10
PER+A+C
Sbjct: 453 PERMASC 459
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PERLAAC 10
PER+A+C
Sbjct: 453 PERMASC 459
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PERLAAC 10
PER+A+C
Sbjct: 453 PERMASC 459
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 PERLAAC 10
PERL++C
Sbjct: 453 PERLSSC 459
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PERLAAC 10
PER+A+C
Sbjct: 453 PERMASC 459
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PERLAAC 10
PER+A+C
Sbjct: 453 PERMASC 459
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 PERLAAC 10
PERL++C
Sbjct: 453 PERLSSC 459
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 PERLAAC 10
PERL++C
Sbjct: 452 PERLSSC 458
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 4 PERLAAC 10
PERL++C
Sbjct: 453 PERLSSC 459
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 PERLAAC 10
PER+A C
Sbjct: 452 PERMAVC 458
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 RAFPERLAA 9
+A P+RLAA
Sbjct: 885 KAAPKRLAA 893
>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)
Query: 1 RAFPERLAAC 10
R P R+ AC
Sbjct: 77 RVLPTRIVAC 86
>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)
Query: 1 RAFPERLAAC 10
R P R+ AC
Sbjct: 77 RVLPTRIVAC 86
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PERLAAC 10
PER+A C
Sbjct: 453 PERMAQC 459
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 PERLAAC 10
PER+++C
Sbjct: 454 PERMSSC 460
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 PERLAAC 10
PER+++C
Sbjct: 453 PERMSSC 459
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 3 FPERLAAC 10
+PE L AC
Sbjct: 539 YPEPLLAC 546
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 PERLAAC 10
P+R+A+C
Sbjct: 453 PQRMASC 459
>sp|VC18_VACCC|ANKYRIN repeat protein C18/B24|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FPERLAAC 10
+PE L AC
Sbjct: 118 YPEPLFAC 125
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 AFPERLAA 9
FP +LAA
Sbjct: 599 GFPSKLAA 606
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 PERLAAC 10
P+RL++C
Sbjct: 453 PQRLSSC 459
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 PERLAAC 10
P+RL++C
Sbjct: 453 PQRLSSC 459
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 AFPERLAAC 10
A PE + AC
Sbjct: 195 AIPEYVMAC 203
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 3 FPERL 7
FPERL
Sbjct: 880 FPERL 884
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 4 PERLAAC 10
P+R+++C
Sbjct: 453 PQRMSSC 459
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 5 ERLAAC 10
ERLA+C
Sbjct: 454 ERLASC 459
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 3 FPERL 7
FPERL
Sbjct: 460 FPERL 464
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 3 FPERL 7
FPERL
Sbjct: 443 FPERL 447
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 3 FPERL 7
FPERL
Sbjct: 476 FPERL 480
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 3 FPERL 7
FPERL
Sbjct: 445 FPERL 449
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 3 FPERL 7
FPERL
Sbjct: 476 FPERL 480
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 5 ERLAAC 10
ERL AC
Sbjct: 453 ERLGAC 458
>sp|ORF24_TTVV4|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 3 FPERL 7
FPERL
Sbjct: 220 FPERL 224
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 4 PERLAAC 10
PE +A+C
Sbjct: 454 PEHMASC 460
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 4 PERLAAC 10
PE +A+C
Sbjct: 454 PEHMASC 460
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 5 ERLAAC 10
ERLA C
Sbjct: 454 ERLACC 459
5|Sequence|21|30|RLAACGAEAA
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 3 AACGAEA 9
ACGA+A
Sbjct: 1061 GACGADA 1067
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 3 AACGAEA 9
ACGA+A
Sbjct: 1061 GACGADA 1067
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 3 AACGAEA 9
A CGA+A
Sbjct: 1052 AQCGADA 1058
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 3 AACGAEA 9
A CGA+A
Sbjct: 1056 AHCGADA 1062
6|Sequence|26|35|GAEAAAYGRC
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 6 AYGRC 10
AYGRC
Sbjct: 195 AYGRC 199
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 6 AYGRC 10
AYGRC
Sbjct: 195 AYGRC 199
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 6 AYGRC 10
AYGRC
Sbjct: 195 AYGRC 199
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 6 AYGRC 10
AYG+C
Sbjct: 195 AYGKC 199
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 6 AYGRC 10
AYG+C
Sbjct: 195 AYGKC 199
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 6 AYGRC 10
AYG+C
Sbjct: 195 AYGKC 199
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 6 AYGRC 10
AYG+C
Sbjct: 195 AYGKC 199
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 6 AYGRC 10
AYG+C
Sbjct: 195 AYGKC 199
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 6 AYGRC 10
AYG+C
Sbjct: 195 AYGKC 199
7|Sequence|31|40|AYGRCVQAST
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 YGRCVQAS 9
YGRC + S
Sbjct: 203 YGRCTKGS 210
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 YGRCVQA 8
YGRC +A
Sbjct: 203 YGRCTRA 209
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 AYGRC 5
AYGRC
Sbjct: 195 AYGRC 199
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 AYGRC 5
AYGRC
Sbjct: 195 AYGRC 199
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 AYGRC 5
AYGRC
Sbjct: 195 AYGRC 199
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YGRCVQ 7
YGRCV+
Sbjct: 141 YGRCVR 146
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YGRCVQ 7
YGRCV+
Sbjct: 141 YGRCVR 146
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 YGRCVQAST 10
YGRC +T
Sbjct: 183 YGRCKDGNT 191
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 AYGRCVQAS 9
AY C+Q++
Sbjct: 869 AYASCIQSA 877
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 2 YGRCVQA 8
+G CVQA
Sbjct: 20 FGDCVQA 26
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 2 YGRCVQA 8
+G CVQA
Sbjct: 20 FGDCVQA 26
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 2 YGRCVQA 8
+G CVQA
Sbjct: 20 FGDCVQA 26
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 2 YGRCVQAS 9
YGRC A+
Sbjct: 368 YGRCPTAA 375
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 GRCVQAS 9
G C QAS
Sbjct: 865 GECTQAS 871
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 YGRCVQ 7
YGRC +
Sbjct: 201 YGRCTK 206
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 YGRCVQ 7
YGRC +
Sbjct: 199 YGRCTR 204
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 YGRCVQ 7
YGRC +
Sbjct: 201 YGRCTK 206
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 YGRCVQ 7
YGRC +
Sbjct: 201 YGRCTK 206
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 YGRCVQ 7
YGRC +
Sbjct: 205 YGRCTR 210
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 YGRCVQ 7
YGRC +
Sbjct: 205 YGRCTR 210
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 YGRCVQ 7
YGRC +
Sbjct: 205 YGRCTR 210
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 YGRCVQ 7
YGRC +
Sbjct: 205 YGRCTR 210
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 YGRCVQ 7
YGRC +
Sbjct: 204 YGRCTR 209
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 1 AYGRC 5
YGRC
Sbjct: 429 GYGRC 433
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 AYGRC 5
YGRC
Sbjct: 429 GYGRC 433
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 AYGRC 5
YGRC
Sbjct: 429 GYGRC 433
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 1 AYGRC 5
YGRC
Sbjct: 429 GYGRC 433
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 AYGRCVQAST 10
A+GRC++ +
Sbjct: 807 AWGRCLRTHS 816
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 AYGRCVQ 7
A+GRC++
Sbjct: 823 AWGRCLR 829
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 YGRC 5
YGRC
Sbjct: 192 YGRC 195
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 YGRC 5
YGRC
Sbjct: 69 YGRC 72
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 YGRC 5
YGRC
Sbjct: 69 YGRC 72
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 YGRC 5
YGRC
Sbjct: 69 YGRC 72
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 YGRC 5
YGRC
Sbjct: 69 YGRC 72
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 YGRC 5
YGRC
Sbjct: 69 YGRC 72
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 YGRC 5
YGRC
Sbjct: 69 YGRC 72
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 YGRC 5
YGRC
Sbjct: 69 YGRC 72
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 2 YGRC 5
YGRC
Sbjct: 69 YGRC 72
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 YGRC 5
YGRC
Sbjct: 69 YGRC 72
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 YGRC 5
YGRC
Sbjct: 69 YGRC 72
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 YGRC 5
YGRC
Sbjct: 198 YGRC 201
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 YGRCVQ 7
YGRC +
Sbjct: 132 YGRCTR 137
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 YGRCVQA 8
YG C Q+
Sbjct: 190 YGTCTQS 196
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 YGRCVQA 8
YG C Q+
Sbjct: 190 YGTCTQS 196
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 YGRCVQA 8
YG C Q+
Sbjct: 190 YGTCTQS 196
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 YGRCVQA 8
YG C Q+
Sbjct: 190 YGTCTQS 196
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 YGRCVQA 8
YG C QA
Sbjct: 191 YGTCNQA 197
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 YGRCVQA 8
YG C QA
Sbjct: 191 YGTCNQA 197
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 YGRCVQA 8
YG C QA
Sbjct: 191 YGTCNQA 197
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 YGRCVQA 8
YG C QA
Sbjct: 191 YGTCNQA 197
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 YGRCVQA 8
YG C QA
Sbjct: 191 YGTCNQA 197
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 YGRC 5
YGRC
Sbjct: 190 YGRC 193
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 YGRC 5
YGRC
Sbjct: 197 YGRC 200
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 YGRCVQ 7
YGRC +
Sbjct: 205 YGRCTR 210
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 YGRCVQ 7
YGRC +
Sbjct: 205 YGRCTR 210
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 YGRCVQ 7
YGRC +
Sbjct: 205 YGRCTR 210
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 YGRCVQ 7
YGRC +
Sbjct: 205 YGRCTR 210
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 YGRC 5
YGRC
Sbjct: 192 YGRC 195
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 YGRC 5
YGRC
Sbjct: 192 YGRC 195
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 YGRC 5
YGRC
Sbjct: 192 YGRC 195
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 YGRC 5
YGRC
Sbjct: 192 YGRC 195
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 YGRC 5
YGRC
Sbjct: 192 YGRC 195
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 YGRC 5
YGRC
Sbjct: 192 YGRC 195
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 YGRC 5
YGRC
Sbjct: 193 YGRC 196
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 YGRC 5
YGRC
Sbjct: 192 YGRC 195
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 2 YGRC 5
YGRC
Sbjct: 192 YGRC 195
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 YGRC 5
YGRC
Sbjct: 193 YGRC 196
8|Sequence|36|45|VQASTAPGGR
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VQASTAPGG 9
+QAS PGG
Sbjct: 407 LQASLGPGG 415
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VQASTAPGG 9
+QAS PGG
Sbjct: 407 LQASLGPGG 415
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VQASTAPGG 9
+QAS PGG
Sbjct: 407 LQASLGPGG 415
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VQASTAP 7
VQAST+P
Sbjct: 362 VQASTSP 368
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 VQASTAP 7
VQAS AP
Sbjct: 51 VQASVAP 57
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 5 TAPGGR 10
T PGGR
Sbjct: 289 TRPGGR 294
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 ASTAPGGR 10
A T PGG+
Sbjct: 463 AYTPPGGK 470
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 QASTAPGGR 10
+ T PGGR
Sbjct: 3051 EVGTRPGGR 3059
>sp|ORF32_VZVO|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Oka vaccine)
Query: 4 STAPGGR 10
+T PGGR
Sbjct: 87 NTCPGGR 93
>sp|ORF32_VZVD|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 STAPGGR 10
+T PGGR
Sbjct: 87 NTCPGGR 93
9|Sequence|41|50|APGGRLSKDF
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 PGGRLSKD 9
PGGR++ D
Sbjct: 246 PGGRVTND 253
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 PGGRLSKD 9
PGG+L +D
Sbjct: 467 PGGKLPED 474
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 2 PGGRLSK 8
PGGRL++
Sbjct: 355 PGGRLTR 361
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 PGGRLSKD 9
PGGR+ D
Sbjct: 3047 PGGRMYAD 3054
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 PGGRLSKD 9
PGGR+ D
Sbjct: 3047 PGGRMYAD 3054
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 PGGRLSKD 9
PGGR+ D
Sbjct: 3056 PGGRIYAD 3063
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 PGGRLSKD 9
P G LSKD
Sbjct: 2031 PPGSLSKD 2038
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 APGGRL 6
+PGGR+
Sbjct: 1088 SPGGRM 1093
>sp|NCAP_MERS1|NUCLEOPROTEIN East respiratory syndrome-related coronavirus
Query: 1 APGGRLSKDF 10
APG +L K+F
Sbjct: 151 APGTKLPKNF 160
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 2 PGGRLSK 8
PGG+LS+
Sbjct: 119 PGGQLSR 125
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 GRLSKD 9
GR+SKD
Sbjct: 732 GRMSKD 737
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 GRLSKD 9
GR+SKD
Sbjct: 732 GRMSKD 737
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 GRLSKD 9
GR+SKD
Sbjct: 732 GRMSKD 737
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 4 GRLSKD 9
G+LSKD
Sbjct: 139 GKLSKD 144
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GRLSKD 9
G+LSKD
Sbjct: 139 GKLSKD 144
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 4 GRLSKD 9
G+LSKD
Sbjct: 139 GKLSKD 144
>sp|ORF52_HHV8P|TEGUMENT protein ORF52|Human herpesvirus 8 type P
Query: 1 APGGRLSKDF 10
AP GR KD
Sbjct: 3 APRGRPKKDL 12
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 2 PGGRL 6
PGGRL
Sbjct: 323 PGGRL 327
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 2 PGGRLSKDF 10
PGG DF
Sbjct: 266 PGGLKENDF 274
>sp|PHOSP_RABVD|PHOSPHOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 PGGRLSKD 9
P GR S+D
Sbjct: 136 PSGRSSED 143
>sp|PHOSP_RABVN|PHOSPHOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 PGGRLSKD 9
P GR S+D
Sbjct: 136 PSGRSSED 143
>sp|PHOSP_ABLVB|PHOSPHOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 4 GRLSKDF 10
GR+++DF
Sbjct: 75 GRMNEDF 81
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 1 APGGRLSKDF 10
APG KDF
Sbjct: 271 APGKLALKDF 280
10|Sequence|46|55|LSKDFCAREF
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 3 KDFCAR 8
+DFCAR
Sbjct: 1205 RDFCAR 1210
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 1 LSKDFCAREF 10
+S+D C ++F
Sbjct: 101 ISEDLCVKQF 110
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SKDFCAR 8
SKDFC +
Sbjct: 252 SKDFCEK 258
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 KDFCAR 8
KDFC R
Sbjct: 553 KDFCLR 558
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 KDFCAR 8
KDFC R
Sbjct: 546 KDFCLR 551
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 KDFCAR 8
KDFC R
Sbjct: 549 KDFCLR 554
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 KDFCAR 8
KDFC R
Sbjct: 549 KDFCLR 554
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 KDFCAR 8
KDFC R
Sbjct: 547 KDFCLR 552
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LSKDFCARE 9
LSKD C E
Sbjct: 698 LSKDTCVSE 706
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 KDFCARE 9
+ FCAR+
Sbjct: 318 RSFCARD 324
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 KDFCARE 9
+ FCAR+
Sbjct: 318 RSFCARD 324
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 KDFCARE 9
+ FCAR+
Sbjct: 318 RSFCARD 324
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 5 FCAREF 10
FC R+F
Sbjct: 3042 FCGRDF 3047
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 FCAREF 10
FC R+F
Sbjct: 5665 FCTRDF 5670
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 FCAREF 10
FC R+F
Sbjct: 3042 FCGRDF 3047
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 FCAREF 10
FC R+F
Sbjct: 5640 FCTRDF 5645
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 LSKDFCARE 9
+ K+ CAR+
Sbjct: 850 VKKEICARQ 858
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 KDFCAREF 10
KD C + F
Sbjct: 841 KDICTKTF 848
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 SKDFCARE 9
SK+ C +E
Sbjct: 193 SKEICGKE 200
11|Sequence|51|60|CAREFEALRS
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 AREFEALRS 10
+RE EALR+
Sbjct: 1034 SREVEALRN 1042
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 AREFEALRS 10
+RE EAL+S
Sbjct: 1034 SREVEALKS 1042
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 AREFEALR 9
AR F+A+R
Sbjct: 282 ARNFDAIR 289
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 AREFEALRS 10
AR F+ +RS
Sbjct: 282 ARNFDTIRS 290
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 CAREFEALRS 10
CA ++ ALR+
Sbjct: 1904 CAEDYRALRA 1913
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 CAREFEALRS 10
CA ++ ALR+
Sbjct: 1904 CAEDYRALRA 1913
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 CAREFEALRS 10
CA ++ ALR+
Sbjct: 1904 CAEDYRALRA 1913
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 CAREFEALRS 10
CA ++ ALR+
Sbjct: 1904 CAEDYRALRA 1913
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 CAREFEALRS 10
CA ++ ALR+
Sbjct: 1904 CAEDYRALRA 1913
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 CAREFEALRS 10
CA ++ ALR+
Sbjct: 1904 CAEDYRALRA 1913
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 CAREFEALRS 10
CA ++ ALR+
Sbjct: 1904 CAEDYRALRA 1913
Query: 4 EFEALRS 10
+FEALR+
Sbjct: 538 DFEALRA 544
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 CAREFEALRS 10
CA ++ ALR+
Sbjct: 1904 CAEDYRALRA 1913
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 CAREFEALRS 10
CA ++ ALR+
Sbjct: 1904 CAEDYRALRA 1913
Query: 4 EFEALRS 10
+FEALR+
Sbjct: 538 DFEALRA 544
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 3 REFEALR 9
+EF+ALR
Sbjct: 279 KEFQALR 285
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 CAREFEAL 8
C EFEA+
Sbjct: 805 CLEEFEAI 812
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 CAREFEAL 8
C EFEA+
Sbjct: 805 CLEEFEAI 812
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 CAREFEALRS 10
CAR + LRS
Sbjct: 861 CARGHDNLRS 870
12|Sequence|56|65|EALRSCFAAA
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 EALRSCFA 8
EA+R+CFA
Sbjct: 1781 EAIRNCFA 1788
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 EALRSCFA 8
EA+R+CFA
Sbjct: 1781 EAIRNCFA 1788
>sp|CCU83_HHV6Z|PUTATIVE CC-type chemokine U83|Human herpesvirus 6B (strain Z29)
Query: 1 EALRSCFAA 9
+ L+SCFAA
Sbjct: 57 KKLKSCFAA 65
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 LRSCFAA 9
+R CFA+
Sbjct: 1785 IRECFAS 1791
13|Sequence|61|74|CFAAAAKKTLEGGC
>sp|GN_HHV7J|ENVELOPE glycoprotein N|Human herpesvirus 7 (strain JI)
Query: 1 CFAAAAKKTLEG 12
CF AK+T++G
Sbjct: 74 CFKTLAKETVKG 85
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMQFFEGAC 85
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 CFAAAAKKTLEGG 13
C+ + AK T E G
Sbjct: 233 CYGSYAKPTNENG 245
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMQFFEGTC 85
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMQFFEGTC 85
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMQFFEGTC 85
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMQFFEGTC 85
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMQFFEGTC 85
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMQFFEGTC 85
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMQFFEGTC 85
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMQFFEGTC 85
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMQFFEGTC 85
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMQFFEGTC 85
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMQFFEGTC 85
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMEFFEGTC 85
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMQLFEGVC 85
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMELFEGVC 85
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 6 AKKTLEGGC 14
AKK L G C
Sbjct: 5773 AKKELSGQC 5781
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 FAAAAKKTLEGGC 14
+ AAA + EG C
Sbjct: 73 YLAAAMELFEGIC 85
>sp|VU26_HHV7J|PROTEIN U26|Human herpesvirus 7 (strain JI)
Query: 1 CFAAAAKKTL 10
CF KKTL
Sbjct: 23 CFHLMIKKTL 32