NDUF5_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|LRWLGAPRLM

>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 LRWLGAP 7
LRWLG P
Sbjct: 163 LRWLGTP 169


>sp|NNR_PYRAE|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Pyrobaculum aerophilum (strain

Query: 2 RWLGAPRLM 10
WLG PRL+
Sbjct: 17 EWLGVPRLV 25


>sp|PURT_IGNH4|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Ignicoccus hospitalis

Query: 1 LRWLGAPR 8
LRW PR
Sbjct: 359 LRWFAKPR 366


>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LRWLGAP 7
L WLGAP
Sbjct: 188 LSWLGAP 194


>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LRWLGAP 7
L WLG+P
Sbjct: 181 LAWLGSP 187


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 RWLGAP 7
+WLG P
Sbjct: 167 KWLGCP 172




2|SequenceR|15|6|WPRRCLRWLG

>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WPRRCLRWLG 10
W R+ L+WLG
Sbjct: 154 WIRKDLKWLG 163


>sp|TRM1_PYRAE|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum aerophilum

Query: 1 WPRRCLRWLG 10
+PR+CLR G
Sbjct: 165 YPRKCLRRYG 174


>sp|TRM1_PYRCJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum calidifontis

Query: 1 WPRRCLRWLG 10
+PR+CLR G
Sbjct: 167 YPRKCLRRYG 176


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 WPRRCL 6
WPR+C+
Sbjct: 526 WPRKCI 531


>sp|NADE_METKA|NH(3)-DEPENDENT NAD(+) synthetase|Methanopyrus kandleri (strain AV19 /

Query: 2 PRRCLRWLG 10
PR+ + WLG
Sbjct: 233 PRKAVDWLG 241


>sp|TRM1_PYRNV|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum neutrophilum

Query: 1 WPRRCLR 7
+PR+CLR
Sbjct: 163 YPRKCLR 169


>sp|TRM1_PYRAR|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum arsenaticum

Query: 1 WPRRCLRWLG 10
+P++CLR G
Sbjct: 165 YPKKCLRRYG 174


>sp|PURP_METTP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothrix thermoacetophila (strain

Query: 3 RRCLRW 8
RRCL W
Sbjct: 115 RRCLAW 120


>sp|ACDD_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit delta|Archaeoglobus fulgidus

Query: 1 WPRRCLRWLG 10
W R+C++ G
Sbjct: 197 WARKCVKKFG 206


>sp|RNH2_PYRAE|RIBONUCLEASE HII|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PRRCLRW 8
P C+RW
Sbjct: 179 PSECIRW 185


>sp|Y1346_THEON|UPF0201 protein TON_1346|Thermococcus onnurineus (strain NA1)

Query: 2 PRRCLRWLG 10
P+R ++WL
Sbjct: 117 PQRLMKWLA 125


>sp|Y1335_THEKO|UPF0201 protein TK1335|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PRRCLRWLG 10
P+R ++WL
Sbjct: 120 PQRLMKWLA 128


>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 1 WPRRCLR 7
+PR+C R
Sbjct: 163 YPRKCFR 169


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 WPRRCLRWL 9
W R LRWL
Sbjct: 153 WIRDDLRWL 161


>sp|PORA_METTM|PYRUVATE synthase subunit PorA|Methanothermobacter marburgensis (strain ATCC

Query: 2 PRRCLRWLG 10
P R + W+G
Sbjct: 369 PERTVSWIG 377


>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 5 CLRWL 9
CLRW+
Sbjct: 193 CLRWV 197


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 2 PRRCLRWLG 10
P R + W+G
Sbjct: 369 PERSVTWIG 377


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 WPRRCLRWL 9
WPR C R L
Sbjct: 871 WPRYCKRVL 879




3|SequenceR|20|11|PVRAAWPRRC

>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PVRAAWPRR 9
PV+ WP+R
Sbjct: 684 PVKQEWPKR 692


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PVRAAWPRR 9
PVR WP R
Sbjct: 676 PVRQEWPDR 684


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 6 WPRRC 10
WPR+C
Sbjct: 526 WPRKC 530


>sp|DHYS_IGNH4|PROBABLE deoxyhypusine synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VRAAWPRR 9
+RAAW R+
Sbjct: 175 LRAAWERK 182


>sp|RL40_SACS2|LARGE ribosomal subunit protein eL40|Saccharolobus solfataricus (strain

Query: 1 PVRAAWPRRC 10
P+RA RRC
Sbjct: 30 PIRATKCRRC 39


>sp|RL40_SACI7|LARGE ribosomal subunit protein eL40|Saccharolobus islandicus (strain

Query: 1 PVRAAWPRRC 10
P+RA RRC
Sbjct: 30 PIRATKCRRC 39


>sp|RL40_SACI6|LARGE ribosomal subunit protein eL40|Saccharolobus islandicus (strain

Query: 1 PVRAAWPRRC 10
P+RA RRC
Sbjct: 30 PIRATKCRRC 39


>sp|RL40_SACI4|LARGE ribosomal subunit protein eL40|Saccharolobus islandicus (strain

Query: 1 PVRAAWPRRC 10
P+RA RRC
Sbjct: 30 PIRATKCRRC 39


>sp|RL40_SACI3|LARGE ribosomal subunit protein eL40|Saccharolobus islandicus (strain

Query: 1 PVRAAWPRRC 10
P+RA RRC
Sbjct: 30 PIRATKCRRC 39


>sp|RL40_SACI2|LARGE ribosomal subunit protein eL40|Saccharolobus islandicus (strain

Query: 1 PVRAAWPRRC 10
P+RA RRC
Sbjct: 30 PIRATKCRRC 39


>sp|RL40_SACI1|LARGE ribosomal subunit protein eL40|Saccharolobus islandicus (strain

Query: 1 PVRAAWPRRC 10
P+RA RRC
Sbjct: 30 PIRATKCRRC 39




4|SequenceR|25|16|GLNEAPVRAA

>sp|HIS4_METAR|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocella arvoryzae (strain

Query: 1 GLNEAPVRA 9
G+NE PVR+
Sbjct: 179 GVNEDPVRS 187


>sp|END4_THEAC|PROBABLE endonuclease 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GLNEAPVRAA 10
GL+ P RAA
Sbjct: 24 GLHNGPARAA 33


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GLNEAPV 7
G+NEAP+
Sbjct: 19 GINEAPL 25


>sp|OFOA_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Sulfolobus sp

Query: 1 GLNEAPV 7
G+NE PV
Sbjct: 331 GMNEVPV 337


>sp|OFOA1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 1 GLNEAPV 7
G+NE PV
Sbjct: 331 GMNEVPV 337


>sp|RLME_HALLT|RIBOSOMAL RNA large subunit methyltransferase|Halorubrum lacusprofundi

Query: 1 GLNEAPVRA 9
GLN APV A
Sbjct: 193 GLNTAPVAA 201


>sp|TRPD_HALWD|ANTHRANILATE phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GLNEAPVRA 9
GL+ APV A
Sbjct: 253 GLDSAPVEA 261


>sp|OFOA2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 1 GLNEAPV 7
G+NE PV
Sbjct: 331 GMNEVPV 337


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter

Query: 3 NEAPVRAA 10
NEA VRAA
Sbjct: 20 NEATVRAA 27


>sp|RL7A_PYRCJ|LARGE ribosomal subunit protein eL8|Pyrobaculum calidifontis (strain DSM

Query: 1 GLNEAPVR 8
GLN PVR
Sbjct: 141 GLNAIPVR 148


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus (Sulfolobus

Query: 1 GLNEAPV 7
G+NE PV
Sbjct: 332 GMNEVPV 338


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 3 NEAPVRAA 10
NEA VRAA
Sbjct: 20 NEAAVRAA 27




5|SequenceR|30|21|TVERRGLNEA

>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VERRGLNEA 10
+ER G+NEA
Sbjct: 15 LERLGINEA 23


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TVERRGLNEA 10
TVE G+NE+
Sbjct: 814 TVELNGMNES 823


>sp|HEM11_PYRAR|GLUTAMYL-TRNA reductase 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 TVERRGLNEA 10
VERRG++ A
Sbjct: 75 VVERRGVDAA 84


>sp|PDXT_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Hyperthermus butylicus (strain

Query: 2 VERRGLNE 9
+ERRGL E
Sbjct: 57 IERRGLLE 64


>sp|COFC_NATPD|2-PHOSPHO-L-LACTATE guanylyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 TVERRG 6
TVERRG
Sbjct: 196 TVERRG 201




6|SequenceR|35|26|PSVGSTVERR

>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 PSVGSTVERR 10
P VG TV RR
Sbjct: 575 PDVGETVARR 584


>sp|Y2139_METS5|MEMO1 family protein Msed_2139|Metallosphaera sedula (strain ATCC 51363

Query: 1 PSVGSTVER 9
PSVGST R
Sbjct: 37 PSVGSTGSR 45


>sp|HMDH_SACS2|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PSVGSTV 7
PS+GSTV
Sbjct: 46 PSIGSTV 52


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 1 PSVGSTVER 9
P +GS VER
Sbjct: 27 PMIGSEVER 35


>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PSVGSTVER 9
P +GS +ER
Sbjct: 27 PMIGSDIER 35


>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 1 PSVGSTVER 9
P +GS +ER
Sbjct: 27 PMIGSDIER 35


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 PSVGSTVER 9
P +GS VER
Sbjct: 30 PMLGSDVER 38


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VGSTVERR 10
VGST ERR
Sbjct: 483 VGSTNERR 490


>sp|PYRE_HALWD|OROTATE phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 SVGSTVER 9
VG+TVER
Sbjct: 137 DVGATVER 144


>sp|SYFB_METLZ|PHENYLALANINE--TRNA ligase beta subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 PSVGSTVERR 10
P +GS VER
Sbjct: 27 PMMGSEVERE 36


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PSVGSTVER 9
P VG TV R
Sbjct: 570 PDVGQTVAR 578




7|SequenceR|40|31|STSGRPSVGS

>sp|DPCKG_METTP|GTP-DEPENDENT dephospho-CoA kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 GRPSVGS 10
G+PSVGS
Sbjct: 146 GQPSVGS 152


>sp|NTPTH_ARCFU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 STSGRPSVG 9
+ +GRP VG
Sbjct: 4 AVTGRPGVG 12


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 STSGRPSVGS 10
STSGR VG+
Sbjct: 36 STSGRLHVGN 45


>sp|SYT_CENSY|THREONINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 TSGRPSVG 9
T+G+PS G
Sbjct: 593 TAGKPSAG 600




8|SequenceR|45|36|NLTRPSTSGR

>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 4 RPSTSGR 10
RPS SGR
Sbjct: 183 RPSISGR 189


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 4 RPSTSGR 10
RPS SGR
Sbjct: 184 RPSISGR 190


>sp|AROK_METM6|SHIKIMATE kinase|Methanococcus maripaludis (strain C6 /

Query: 2 LTRPSTSG 9
+T+PST+G
Sbjct: 271 ITKPSTNG 278


>sp|AROK_METM5|SHIKIMATE kinase|Methanococcus maripaludis (strain C5 /

Query: 2 LTRPSTSG 9
+T+PST+G
Sbjct: 271 ITKPSTNG 278




9|SequenceR|50|41|DRDFINLTRP

>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DRDFINLTRP 10
DRD + + RP
Sbjct: 3 DRDLLEIIRP 12


>sp|Y325_METJA|UNCHARACTERIZED protein MJ0325|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DRDFINL 7
+RDFIN+
Sbjct: 120 ERDFINI 126


>sp|RL5_HALSA|LARGE ribosomal subunit protein uL5|Halobacterium salinarum (strain ATCC

Query: 5 INLTRP 10
+NLTRP
Sbjct: 131 VNLTRP 136


>sp|RL5_HALS3|LARGE ribosomal subunit protein uL5|Halobacterium salinarum (strain ATCC

Query: 5 INLTRP 10
+NLTRP
Sbjct: 131 VNLTRP 136


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 DRDFINLTR 9
+R+FIN+ R
Sbjct: 396 EREFINVVR 404


>sp|RL5_HALWD|LARGE ribosomal subunit protein uL5|Haloquadratum walsbyi (strain DSM

Query: 5 INLTRP 10
+NLTRP
Sbjct: 130 VNLTRP 135




10|SequenceR|55|46|QKRKLDRDFI

>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KRKLDRDFI 10
KR LD+D+I
Sbjct: 347 KRTLDKDYI 355


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 1 QKRKLDRDFI 10
+ RKL RDF+
Sbjct: 294 EGRKLARDFM 303


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 5 LDRDFI 10
LDRDF+
Sbjct: 263 LDRDFV 268


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 5 LDRDFI 10
LDRDF+
Sbjct: 263 LDRDFV 268


>sp|G1PDH_SULAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Sulfolobus acidocaldarius (strain ATCC

Query: 4 KLDRDFI 10
K+DR+FI
Sbjct: 109 KIDREFI 115


>sp|RS19_METAR|SMALL ribosomal subunit protein uS19|Methanocella arvoryzae (strain DSM

Query: 1 QKRKLDRDF 9
Q+RK+ R+F
Sbjct: 45 QRRKIKREF 53


>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KRKLDRDFI 10
++K+D DFI
Sbjct: 264 RQKVDADFI 272


>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 2 KRKLDRDFI 10
++K+D DFI
Sbjct: 264 RQKVDADFI 272


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 KLDRDFI 10
KLDR+F+
Sbjct: 534 KLDREFV 540




11|SequenceR|60|51|AAWNKQKRKL

>sp|GPMA_METPE|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 1 AAWNKQKR 8
+AWNK+ R
Sbjct: 12 SAWNKENR 19


>sp|KAD_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 WNKQKRK 9
WN++K+K
Sbjct: 214 WNREKKK 220


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 AWNKQKR 8
AWNK+++
Sbjct: 364 AWNKERQ 370


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 3 WNKQKRK 9
WN KRK
Sbjct: 67 WNVDKRK 73


>sp|Y1016_METJA|UNCHARACTERIZED protein MJ1016|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AAWNKQKRKL 10
+ W K KRKL
Sbjct: 4 SEWTKNKRKL 13


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans (strain

Query: 3 WNKQKRKL 10
WN+ KR+L
Sbjct: 471 WNRLKREL 478




12|SequenceR|65|56|PEPQRAAWNK

>sp|PANE_HALSA|2-DEHYDROPANTOATE 2-reductase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PQRAAWNK 10
PQRA W K
Sbjct: 178 PQRAVWEK 185


>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 1 PEPQRAAWNK 10
PEP + +W +
Sbjct: 327 PEPWKVSWTR 336


>sp|Y1546_ARCFU|UNCHARACTERIZED MscS family protein AF_1546|Archaeoglobus fulgidus (strain ATCC

Query: 1 PEPQRAAW 8
P PQR W
Sbjct: 258 PFPQRVVW 265


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 2 EPQRAAWN 9
EP+R WN
Sbjct: 391 EPERGLWN 398


>sp|THIE_THEAC|THIAMINE-PHOSPHATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PEPQRAA 7
P+P+RAA
Sbjct: 192 PDPERAA 198


>sp|TRM1_THEVO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma volcanium

Query: 2 EPQRAAWN 9
EPQ + WN
Sbjct: 196 EPQLSIWN 203


>sp|PYRH_HYPBU|URIDYLATE kinase|Hyperthermus butylicus (strain DSM 5456

Query: 1 PEPQRAAW 8
PEP R+ W
Sbjct: 92 PEPPRSIW 99


>sp|GATA_CENSY|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Cenarchaeum symbiosum (strain A)

Query: 3 PQRAAWNK 10
P R WNK
Sbjct: 135 PSRNPWNK 142


>sp|Y1316_METTH|UPF0215 protein MTH_1316|Methanothermobacter thermautotrophicus (strain

Query: 1 PEPQRAA 7
PEP RAA
Sbjct: 182 PEPLRAA 188


>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EPQRAAW 8
+PQ +AW
Sbjct: 134 DPQHSAW 140


>sp|ACDA1_PYRFU|ACETATE--COA ligase [ADP-forming] I subunit|Pyrococcus furiosus (strain ATCC

Query: 1 PEPQRA 6
PEP+RA
Sbjct: 437 PEPERA 442


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 1 PEPQRAAW 8
P+P R +W
Sbjct: 190 PDPYRNSW 197


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 1 PEPQRAAWN 9
PE R AW+
Sbjct: 752 PEEAREAWS 760


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 2 EPQRAAWN 9
EP+R W+
Sbjct: 358 EPERGLWD 365


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 2 EPQRAAWN 9
EP+R W+
Sbjct: 391 EPERGLWD 398


>sp|SYH_METKA|HISTIDINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 EPQRAAWNK 10
+PQR W +
Sbjct: 116 QPQRGRWRE 124




13|SequenceR|70|61|YDFKTPEPQR

>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YDFKTPEP 8
YD+ TPEP
Sbjct: 762 YDYDTPEP 769


>sp|Y2347_METMJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanoculleus

Query: 3 FKTPEPQR 10
++TPEP++
Sbjct: 191 YRTPEPEK 198


>sp|PDXS_THEVO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermoplasma volcanium (strain

Query: 3 FKTPEPQR 10
FK+P+P++
Sbjct: 282 FKSPDPEK 289


>sp|PDXS_THEAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermoplasma acidophilum (strain

Query: 3 FKTPEPQR 10
FK+P P++
Sbjct: 282 FKSPNPEK 289


>sp|DNAG_STAMF|DNA primase DnaG|Staphylothermus marinus (strain ATCC 43588

Query: 3 FKTPEPQR 10
K PEPQ+
Sbjct: 143 LKVPEPQK 150


>sp|TRIN_SULTO|PUTATIVE Tricorn-like protease N-terminal subunit|Sulfurisphaera tokodaii

Query: 2 DFKTPEPQ 9
DF TP PQ
Sbjct: 124 DFHTPFPQ 131


>sp|KAE1B_HALMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 FKTPEPQR 10
F+TP+P R
Sbjct: 18 FETPDPAR 25


>sp|GCH3_NATPD|GTP cyclohydrolase III|Natronomonas pharaonis (strain ATCC 35678

Query: 5 TPEPQR 10
TPEP+R
Sbjct: 20 TPEPRR 25


>sp|COBD_METVS|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus vannielii (strain

Query: 3 FKTPEP 8
FKTP P
Sbjct: 243 FKTPSP 248


>sp|GCH3_HALLT|GTP cyclohydrolase III|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 TPEPQR 10
TPEP+R
Sbjct: 20 TPEPRR 25


>sp|END4_HALMA|PROBABLE endonuclease 4|Haloarcula marismortui (strain ATCC 43049

Query: 1 YDFKTPE 7
YD TPE
Sbjct: 182 YDLSTPE 188


>sp|DPHB_METMP|DIPHTHINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YDFKTP 6
YDFK+P
Sbjct: 225 YDFKSP 230


>sp|DPHB_METM6|DIPHTHINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 YDFKTP 6
YDFK+P
Sbjct: 225 YDFKSP 230


>sp|MFNC_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate transaminase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DFKTPEP 8
DF TP+P
Sbjct: 40 DFNTPKP 46


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YDFKTPE 7
YD TPE
Sbjct: 182 YDLSTPE 188


>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain ATCC

Query: 1 YDFKTPE 7
YD+K PE
Sbjct: 126 YDYKNPE 132


>sp|SFSA_SULAC|SUGAR fermentation stimulation protein homolog|Sulfolobus

Query: 1 YDFKTP 6
YDF TP
Sbjct: 9 YDFDTP 14


>sp|Y1427_HALMA|UNCHARACTERIZED protein rrnAC1427|Haloarcula marismortui (strain ATCC 43049

Query: 2 DFKTPEP 8
D++ PEP
Sbjct: 302 DYRAPEP 308


>sp|Y516_METJA|UNCHARACTERIZED protein MJ0516|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KTPEPQ 9
KTPEP+
Sbjct: 75 KTPEPK 80


>sp|QUEE_METAC|7-CARBOXY-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DFKTPEPQR 10
DFK PE R
Sbjct: 138 DFKLPEALR 146


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 YDFKTPEP 8
YD+ T EP
Sbjct: 545 YDYDTAEP 552


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 4 KTPEPQR 10
K PEP+R
Sbjct: 63 KLPEPER 69




14|SequenceR|75|66|VEEKLYDFKT

>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VEEKLYDFKT 10
+E+KLYD+ T
Sbjct: 73 IEKKLYDYVT 82


>sp|AROC_CALMQ|CHORISMATE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 KLYDFK 9
KLYDF+
Sbjct: 115 KLYDFR 120


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VEEKLYDFK 9
++E+LYD+K
Sbjct: 351 LQEELYDWK 359


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 3 EKLYDF 8
EKLYDF
Sbjct: 113 EKLYDF 118


>sp|CBID_METS3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 3 EKLYDFKT 10
+KLYD KT
Sbjct: 296 QKLYDSKT 303


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 KLYDFKT 10
KLYDF T
Sbjct: 1429 KLYDFTT 1435


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 KLYDFKT 10
KLYDF T
Sbjct: 1343 KLYDFTT 1349


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 2 EEKLYDF 8
EEKLYD
Sbjct: 388 EEKLYDM 394


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EEKLYDF 8
EEKLYD
Sbjct: 388 EEKLYDM 394


>sp|TRPD_METS5|ANTHRANILATE phosphoribosyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VEEKLYDF 8
VEE YDF
Sbjct: 241 VEEYTYDF 248


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 EEKLYDFKT 10
E ++YD+KT
Sbjct: 357 ENEVYDYKT 365


>sp|RL23_METMA|LARGE ribosomal subunit protein uL23|Methanosarcina mazei (strain ATCC

Query: 3 EKLYDFK 9
EKLY FK
Sbjct: 40 EKLYGFK 46


>sp|Y1321_PYRHO|UPF0252 protein PH1321|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 LYDFKT 10
LYDF+T
Sbjct: 148 LYDFRT 153


>sp|DHYS_HALSA|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VEEKLYDF 8
+EE LYDF
Sbjct: 151 LEEYLYDF 158


>sp|DHYS_HALS3|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VEEKLYDF 8
+EE LYDF
Sbjct: 151 LEEYLYDF 158


>sp|RL23_METBF|LARGE ribosomal subunit protein uL23|Methanosarcina barkeri (strain

Query: 3 EKLYDFK 9
EKLY FK
Sbjct: 40 EKLYGFK 46


>sp|MDH_PICTO|MALATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 3 EKLYDFK 9
EK+YD K
Sbjct: 287 EKIYDLK 293


>sp|TCPO_METOL|PROBABLE 2' cyclic ADP-D-ribose synthase|Methanobrevibacter olleyae

Query: 3 EKLYDFKT 10
E+LYD++T
Sbjct: 81 ERLYDYET 88


>sp|RNP4_THEAC|RIBONUCLEASE P protein component 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 EKLYDF 8
EKLYDF
Sbjct: 17 EKLYDF 22




15|SequenceR|80|71|AIRSGVEEKL

>sp|Y453_METLZ|UPF0280 protein Mlab_0453|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AIRSGVEEKL 10
A R+GVEE L
Sbjct: 32 AARTGVEEYL 41


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 2 IRSGVEEKL 10
IRSG EKL
Sbjct: 436 IRSGYNEKL 444


>sp|SYD_THEAC|ASPARTATE--TRNA(ASP) ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AIRSGVE 7
AIRSG+E
Sbjct: 245 AIRSGIE 251


>sp|AMT3_ARCFU|AMMONIUM transporter Amt3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IRSGVEEKL 10
+R+GV+E L
Sbjct: 291 VRAGVDESL 299


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 AIRSGVEEKL 10
A+ G EEKL
Sbjct: 122 AVSPGTEEKL 131




16|SequenceR|85|76|DYVRDAIRSG

>sp|FAEHP_METTP|BIFUNCTIONAL enzyme Fae/Hps|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DYVRDAIRSG 10
D VRDA+R+G
Sbjct: 342 DNVRDALRAG 351


>sp|RS3A_PYRIL|SMALL ribosomal subunit protein eS1|Pyrobaculum islandicum (strain DSM

Query: 1 DYVRDAIRSG 10
DY+R +R G
Sbjct: 99 DYIRSLVRKG 108


>sp|RS3A_PYRAE|SMALL ribosomal subunit protein eS1|Pyrobaculum aerophilum (strain ATCC

Query: 1 DYVRDAIRSG 10
DY+R +R G
Sbjct: 99 DYIRSLVRKG 108


>sp|OFOA2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 1 DYVRDAIRS 9
DY++DAI S
Sbjct: 185 DYLKDAISS 193


>sp|RS3A_PYRNV|SMALL ribosomal subunit protein eS1|Pyrobaculum neutrophilum (strain DSM

Query: 1 DYVRDAIRSG 10
DYVR +R G
Sbjct: 99 DYVRSLVRKG 108


>sp|RS3A_PYRAR|SMALL ribosomal subunit protein eS1|Pyrobaculum arsenaticum (strain DSM

Query: 1 DYVRDAIRSG 10
DYV+ +R G
Sbjct: 99 DYVKSLVRKG 108


>sp|Y1110_METTH|UNCHARACTERIZED protein MTH_1110|Methanothermobacter thermautotrophicus (strain

Query: 1 DYVRDAI 7
DY RDA+
Sbjct: 103 DYARDAV 109


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 1 DYVRDAIRSG 10
DY DA+R G
Sbjct: 524 DYAFDALRRG 533


>sp|PSA_METVS|PROTEASOME subunit alpha|Methanococcus vannielii (strain ATCC 35089

Query: 1 DYVRDAIRSG 10
+Y R+A+R G
Sbjct: 27 EYAREAVRRG 36


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 1 DYVRDAIR 8
DY+ DAIR
Sbjct: 642 DYMGDAIR 649


>sp|PSA_METM7|PROTEASOME subunit alpha|Methanococcus maripaludis (strain C7 /

Query: 1 DYVRDAIRSG 10
+Y R+A+R G
Sbjct: 27 EYAREAVRRG 36


>sp|PSA_METM5|PROTEASOME subunit alpha|Methanococcus maripaludis (strain C5 /

Query: 1 DYVRDAIRSG 10
+Y R+A+R G
Sbjct: 27 EYAREAVRRG 36


>sp|PSA_METM6|PROTEASOME subunit alpha|Methanococcus maripaludis (strain C6 /

Query: 1 DYVRDAIRSG 10
+Y R+A+R G
Sbjct: 27 EYAREAVRRG 36


>sp|NIKR1_METAC|PUTATIVE nickel-responsive regulator 1|Methanosarcina acetivorans (strain

Query: 3 VRDAIRS 9
+RDAIRS
Sbjct: 36 IRDAIRS 42


>sp|PSA_METMP|PROTEASOME subunit alpha|Methanococcus maripaludis (strain DSM 14266

Query: 1 DYVRDAIRSG 10
+Y R+A+R G
Sbjct: 27 EYAREAVRRG 36


>sp|PSA_METJA|PROTEASOME subunit alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DYVRDAIRSG 10
+Y R+A+R G
Sbjct: 26 EYAREAVRRG 35


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 VRDAIRSG 10
+ DA+RSG
Sbjct: 25 IEDAVRSG 32


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DYVRDAIR 8
D VRDA+R
Sbjct: 674 DSVRDALR 681


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DYVRDAIRSG 10
D V DA++SG
Sbjct: 378 DKVIDAVKSG 387


>sp|NIKR3_METAC|PUTATIVE nickel-responsive regulator 3|Methanosarcina acetivorans (strain

Query: 3 VRDAIRS 9
+RDAIRS
Sbjct: 36 IRDAIRS 42


>sp|NIKR2_METMA|PUTATIVE nickel-responsive regulator 2|Methanosarcina mazei (strain ATCC

Query: 3 VRDAIRS 9
+RDAIRS
Sbjct: 36 IRDAIRS 42


>sp|RFRNP_AERPE|RNA-FREE ribonuclease P|Aeropyrum pernix (strain ATCC 700893

Query: 1 DYVRDAIRS 9
D+VR A+RS
Sbjct: 123 DHVRRALRS 131


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 DYVRDAI 7
DYVRD +
Sbjct: 879 DYVRDVL 885


>sp|AKSA_METKA|HOMOCITRATE synthase AksA|Methanopyrus kandleri (strain AV19 /

Query: 2 YVRDAIRS 9
YVR+A+R
Sbjct: 5 YVREAVRE 12


>sp|METK_THEKO|S-ADENOSYLMETHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DYVRDAIR 8
DY+R A+R
Sbjct: 117 DYLRKAVR 124


>sp|ALF1_PYRHO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YVRDAIRSG 10
YV DAI+ G
Sbjct: 107 YVEDAIKLG 115


>sp|ALF1_THEKO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YVRDAIRSG 10
YV DAI+ G
Sbjct: 107 YVEDAIKLG 115




17|SequenceR|90|81|FNRPIDYVRD

>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 1 FNRPIDYVRD 10
NRP+DY+ D
Sbjct: 86 LNRPVDYIDD 95


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 NRPIDYV 8
NRPIDY+
Sbjct: 234 NRPIDYL 240


>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 NRPIDYV 8
NRPIDY+
Sbjct: 234 NRPIDYL 240


>sp|NADE_METMA|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NRPIDYVRD 10
NR ID++RD
Sbjct: 8 NRIIDFIRD 16


>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 RPIDYVRD 10
RP+DY+ D
Sbjct: 236 RPVDYLND 243


>sp|PURA_METST|ADENYLOSUCCINATE synthetase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NRPIDYVRD 10
NR IDY +D
Sbjct: 140 NRTIDYAKD 148


>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 4 PIDYVR 9
PIDYVR
Sbjct: 128 PIDYVR 133


>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 4 PIDYVR 9
PIDYVR
Sbjct: 129 PIDYVR 134


>sp|SYFA_PYRAE|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FNRPIDYVRD 10
FN +DYVR+
Sbjct: 221 FNEFLDYVRE 230


>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FNRPIDYVRD 10
F RPID V +
Sbjct: 203 FRRPIDVVEE 212


>sp|GCH1L_PYRAB|GTP cyclohydrolase 1 type 2|Pyrococcus abyssi (strain GE5 /

Query: 4 PIDYVR 9
P+DYVR
Sbjct: 155 PVDYVR 160


>sp|SYFA_PYRAR|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FNRPIDYVRD 10
FN +DYVR+
Sbjct: 220 FNEFLDYVRE 229


>sp|DNAG_METB6|DNA primase DnaG|Methanoregula boonei (strain DSM 21154

Query: 4 PIDYVRD 10
P++YVRD
Sbjct: 266 PVEYVRD 272


>sp|RTCA_METJA|RNA 3'-terminal phosphate cyclase|Methanocaldococcus jannaschii (strain

Query: 4 PIDYVRD 10
PIDYV++
Sbjct: 130 PIDYVKN 136


>sp|DNAG_METPE|DNA primase DnaG|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 PIDYVRD 10
P++YVRD
Sbjct: 266 PVEYVRD 272


>sp|PYRE_SULAC|OROTATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 FNRPIDYVR 9
N+P+ Y+R
Sbjct: 79 LNKPMGYIR 87


>sp|RTCA_PYRNV|RNA 3'-terminal phosphate cyclase|Pyrobaculum neutrophilum (strain DSM

Query: 4 PIDYVR 9
PIDY+R
Sbjct: 129 PIDYMR 134


>sp|RTCA_PYRIL|RNA 3'-terminal phosphate cyclase|Pyrobaculum islandicum (strain DSM

Query: 4 PIDYVR 9
PIDY+R
Sbjct: 129 PIDYMR 134


>sp|RTCA_PYRCJ|RNA 3'-terminal phosphate cyclase|Pyrobaculum calidifontis (strain DSM

Query: 4 PIDYVR 9
PIDY+R
Sbjct: 128 PIDYMR 133


>sp|RTCA_PYRAE|RNA 3'-terminal phosphate cyclase|Pyrobaculum aerophilum (strain ATCC

Query: 4 PIDYVR 9
PIDY+R
Sbjct: 129 PIDYMR 134


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain ATCC

Query: 4 PIDYVR 9
PIDY+R
Sbjct: 130 PIDYMR 135


>sp|RTCA_THEGJ|RNA 3'-terminal phosphate cyclase|Thermococcus gammatolerans (strain

Query: 4 PIDYVRD 10
P+DY+R+
Sbjct: 128 PVDYLRN 134


>sp|CP119_SULTO|CYTOCHROME P450 119|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NRPIDYVRD 10
N P+D+VR+
Sbjct: 91 NLPVDFVRE 99


>sp|TRPB1_PYRAB|TRYPTOPHAN synthase beta chain 1|Pyrococcus abyssi (strain GE5 /

Query: 1 FNRPIDY 7
FNR +DY
Sbjct: 35 FNRQLDY 41


>sp|KHSE_PYRAE|HOMOSERINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PIDYVR 9
PIDYV+
Sbjct: 147 PIDYVK 152


>sp|MCRG_METVA|METHYL-COENZYME M reductase subunit gamma|Methanococcus vannielii

Query: 1 FNRPIDYVRD 10
+ P DYVRD
Sbjct: 62 MDMPADYVRD 71


>sp|GGR_METAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 RPIDYVRD 10
RP+DY+ +
Sbjct: 236 RPVDYLNN 243


>sp|Y215_METJA|UNCHARACTERIZED protein MJ0215|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PIDYVRD 10
PI+YVR+
Sbjct: 127 PIEYVRE 133


>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 RPIDYVRD 10
RP+ YV D
Sbjct: 93 RPVKYVED 100


>sp|IF5A_PYRIL|TRANSLATION initiation factor 5A|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PIDYVRD 10
PIDYV +
Sbjct: 99 PIDYVEE 105


>sp|RL15_METKA|LARGE ribosomal subunit protein uL15|Methanopyrus kandleri (strain AV19

Query: 1 FNRPIDYVRD 10
FNRP VR+
Sbjct: 62 FNRPPKVVRE 71


>sp|Y3520_METJA|UNCHARACTERIZED protein MJECL20|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PIDYVRD 10
PI+YVR+
Sbjct: 117 PIEYVRE 123


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NRPIDYVRD 10
NR IDY+ +
Sbjct: 205 NRVIDYIEE 213


>sp|AROC_THEAC|CHORISMATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FNRPIDYVR 9
F P+DYV+
Sbjct: 32 FKIPLDYVQ 40


>sp|PURA_THEAC|ADENYLOSUCCINATE synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 RPIDYV 8
+PIDYV
Sbjct: 357 KPIDYV 362


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 FNRPIDYVRD 10
F+R +DY+ D
Sbjct: 392 FHRRLDYILD 401


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FNRPIDYVRD 10
FN +D+++D
Sbjct: 485 FNNKVDWLKD 494


>sp|K6PF_PYRHO|ADP-SPECIFIC phosphofructokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NRPIDYV 8
N PID+V
Sbjct: 51 NEPIDFV 57




18|SequenceR|95|86|DLALPFNRPI

>sp|RISB_METS5|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DLALPFNRPI 10
DL+L FN+P+
Sbjct: 93 DLSLEFNKPV 102


>sp|RISB_METMA|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DLALPFNRPI 10
DL+L FN+P+
Sbjct: 90 DLSLEFNKPV 99


>sp|RISB_METAC|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLALPFNRPI 10
DL+L FN+P+
Sbjct: 90 DLSLEFNKPV 99


>sp|RISB_METBF|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DLALPFNRPI 10
DL+L FN+P+
Sbjct: 90 DLSLEFNKPV 99


>sp|PGK2_PYRAB|2-PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 DLALPFNRPI 10
D+ALPF+R I
Sbjct: 10 DVALPFSRGI 19


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ALPFNRPI 10
ALPFNR I
Sbjct: 697 ALPFNRNI 704


>sp|RISB_PICTO|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 DLALPFNRPI 10
DL+L +N+P+
Sbjct: 89 DLSLEYNKPV 98


>sp|TRPA_HALMA|TRYPTOPHAN synthase alpha chain|Haloarcula marismortui (strain ATCC 43049

Query: 1 DLALPFNRPI 10
+L LPF+ PI
Sbjct: 43 ELGLPFSEPI 52


>sp|TRUB_NANEQ|PROBABLE tRNA pseudouridine synthase B|Nanoarchaeum equitans (strain

Query: 5 PFNRPI 10
P+NRPI
Sbjct: 47 PYNRPI 52


>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 5 PFNRPI 10
P+NRPI
Sbjct: 19 PYNRPI 24


>sp|RISB_METJA|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLALPFNRPI 10
DLAL +++P+
Sbjct: 92 DLALQYDKPV 101


>sp|RISB_SACS2|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DLALPFNRPI 10
DL+ FN+P+
Sbjct: 93 DLSTEFNKPV 102


>sp|RISB_SACI7|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DLALPFNRPI 10
DL+ FN+P+
Sbjct: 93 DLSTEFNKPV 102


>sp|RISB_SACI6|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DLALPFNRPI 10
DL+ FN+P+
Sbjct: 93 DLSTEFNKPV 102


>sp|RISB_SACI4|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DLALPFNRPI 10
DL+ FN+P+
Sbjct: 93 DLSTEFNKPV 102


>sp|RISB_SACI3|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 DLALPFNRPI 10
DL+ FN+P+
Sbjct: 93 DLSTEFNKPV 102


>sp|RISB_SACI2|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DLALPFNRPI 10
DL+ FN+P+
Sbjct: 93 DLSTEFNKPV 102


>sp|RISB_SACI1|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DLALPFNRPI 10
DL+ FN+P+
Sbjct: 93 DLSTEFNKPV 102


>sp|RISB_METTH|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DLALPFNRPI 10
DLAL +++P+
Sbjct: 91 DLALDYDKPV 100


>sp|TRPA_NATPD|TRYPTOPHAN synthase alpha chain|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DLALPFNRPI 10
+L LPF+ PI
Sbjct: 42 ELGLPFSEPI 51


>sp|TRUD_HALMA|PROBABLE tRNA pseudouridine synthase D|Haloarcula marismortui (strain ATCC

Query: 3 ALPFNRPI 10
LPF+RP+
Sbjct: 317 GLPFDRPV 324


>sp|TRPA_HALVD|TRYPTOPHAN synthase alpha chain|Haloferax volcanii (strain ATCC 29605

Query: 1 DLALPFNRPI 10
+L LPF+ PI
Sbjct: 43 ELGLPFSEPI 52


>sp|TRPA_METKA|TRYPTOPHAN synthase alpha chain|Methanopyrus kandleri (strain AV19 /

Query: 1 DLALPFNRPI 10
+L +PF+ PI
Sbjct: 51 ELGVPFSEPI 60


>sp|RISB_METVS|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DLALPFNRPI 10
DL+L F +P+
Sbjct: 89 DLSLEFEKPV 98


>sp|RISB_METMJ|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DLALPFNRPI 10
DL+L F +P+
Sbjct: 90 DLSLEFGKPV 99


>sp|RISB_METM7|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 DLALPFNRPI 10
DL+L F +P+
Sbjct: 89 DLSLEFGKPV 98


>sp|RISB_METM6|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 DLALPFNRPI 10
DL+L F +P+
Sbjct: 89 DLSLEFGKPV 98


>sp|RISB_METM5|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 DLALPFNRPI 10
DL+L F +P+
Sbjct: 89 DLSLEFGKPV 98


>sp|COMB_THEAC|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma acidophilum (strain

Query: 2 LALPFNRPI 10
L LP NRPI
Sbjct: 133 LILPSNRPI 141


>sp|PURO_METTP|IMP cyclohydrolase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LALPFNRPI 10
LPF RP+
Sbjct: 171 FGLPFERPV 179


>sp|RISB_METMP|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DLALPFNRPI 10
DL+L F +P+
Sbjct: 89 DLSLDFGKPV 98


>sp|COFH2_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina barkeri (strain Fusaro

Query: 4 LPFNRPI 10
LP+N PI
Sbjct: 250 LPYNNPI 256


>sp|COFH2_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina acetivorans (strain

Query: 4 LPFNRPI 10
LP+N PI
Sbjct: 250 LPYNNPI 256


>sp|TMG10_PYRAB|TRNA (guanine(10)-N2)-dimethyltransferase|Pyrococcus abyssi (strain GE5

Query: 5 PFNRPI 10
PF+RPI
Sbjct: 158 PFSRPI 163


>sp|KAE1B_METS3|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 LALPFNRPI 10
LAL N+PI
Sbjct: 98 LALSLNKPI 106


>sp|COMB_THEVO|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma volcanium (strain

Query: 2 LALPFNRPI 10
L +P NRPI
Sbjct: 133 LVVPSNRPI 141


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 4 LPFNRPI 10
LP+N P+
Sbjct: 250 LPYNNPV 256


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LPFNRPI 10
LP+N PI
Sbjct: 102 LPYNTPI 108


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 1 DLALPFN 7
DLALP N
Sbjct: 290 DLALPVN 296


>sp|RISB_META3|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DLALPFNRPI 10
DL+L +++P+
Sbjct: 89 DLSLQYDKPV 98




19|SequenceR|100|91|RGCGLDLALP

>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 RGCGLDLALP 10
R CG+D A+P
Sbjct: 164 RWCGVDTAVP 173


>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 2 GCGLDLA 8
GCGLDLA
Sbjct: 356 GCGLDLA 362


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 GCGLDLAL 9
GCG+DL +
Sbjct: 17 GCGIDLVV 24


>sp|COME_METJA|SULFOPYRUVATE decarboxylase subunit beta|Methanocaldococcus jannaschii (strain

Query: 1 RGCGLD 6
+GCGLD
Sbjct: 125 KGCGLD 130


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 4 GLDLALP 10
G+DLALP
Sbjct: 497 GVDLALP 503


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GCGLDL 7
GCG+DL
Sbjct: 14 GCGIDL 19


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 GCGLDLAL 9
GCG+DL +
Sbjct: 16 GCGVDLVV 23


>sp|RS27_METB6|SMALL ribosomal subunit protein eS27|Methanoregula boonei (strain DSM

Query: 3 CGLDLALP 10
CG DLA P
Sbjct: 39 CGRDLATP 46


>sp|RS5_ARCFU|SMALL ribosomal subunit protein uS5|Archaeoglobus fulgidus (strain ATCC

Query: 2 GCGLDLALP 10
GCG D +LP
Sbjct: 119 GCGGDHSLP 127


>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RGCGLDLALP 10
R CG+D +P
Sbjct: 164 RWCGVDTTVP 173


>sp|MTD_METMJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoculleus

Query: 4 GLDLALP 10
G DLALP
Sbjct: 171 GADLALP 177


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 4 GLDLALP 10
GLDL LP
Sbjct: 95 GLDLVLP 101


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 2 GCGLDLALP 10
GCG LA+P
Sbjct: 226 GCGHPLAIP 234


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RGCGLD 6
R CGLD
Sbjct: 20 RACGLD 25


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 2 GCGLDLA 8
CG+DLA
Sbjct: 85 ACGIDLA 91


>sp|KHSE_PYRIL|HOMOSERINE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GCGLDL 7
GCG+D+
Sbjct: 35 GCGVDI 40




20|SequenceR|105|96|QAIYGRGCGL

>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 QAIYGRGCGL 10
QA+Y RGC +
Sbjct: 293 QALYERGCNV 302


>sp|TRPF_METVS|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus vannielii (strain ATCC 35089

Query: 5 GRGCGL 10
G+GCG+
Sbjct: 135 GKGCGM 140


>sp|AROB_PICTO|3-DEHYDROQUINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 AIYGRGCGL 10
+IY RG GL
Sbjct: 103 SIYKRGMGL 111


>sp|LYSK_SULTO|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QAIYGRG 7
+ IYGRG
Sbjct: 82 EVIYGRG 88


>sp|LYSK_SACI7|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 QAIYGRG 7
+ IYGRG
Sbjct: 83 EVIYGRG 89


>sp|LYSK_SACI6|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 QAIYGRG 7
+ IYGRG
Sbjct: 83 EVIYGRG 89


>sp|LYSK_SACI4|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 QAIYGRG 7
+ IYGRG
Sbjct: 83 EVIYGRG 89


>sp|LYSK_SACI3|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 QAIYGRG 7
+ IYGRG
Sbjct: 83 EVIYGRG 89


>sp|LYSK_SACI2|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 QAIYGRG 7
+ IYGRG
Sbjct: 83 EVIYGRG 89


>sp|LYSK_SACI1|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 QAIYGRG 7
+ IYGRG
Sbjct: 83 EVIYGRG 89


>sp|MSRA_METM7|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 2 AIYGRGC 8
A++G GC
Sbjct: 7 AVFGMGC 13


>sp|MSRA_METM6|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 2 AIYGRGC 8
A++G GC
Sbjct: 7 AVFGMGC 13


>sp|MSRA_METM5|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 2 AIYGRGC 8
A++G GC
Sbjct: 7 AVFGMGC 13


>sp|THIRX_METTH|THIOREDOXIN thermautotrophicus (strain ATCC 29096

Query: 3 IYGRGCG 9
IYG GC
Sbjct: 6 IYGTGCA 12


>sp|TBP_CENSY|TATA-BOX-BINDING protein|Cenarchaeum symbiosum (strain A)

Query: 1 QAIYGRGCG 9
+A+YG CG
Sbjct: 38 EAVYGGRCG 46




21|SequenceR|110|101|EKNLYQAIYG

>sp|MNTP_METMA|MANGANESE exporter MntP|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KNLYQAIYG 10
K +Y+A+YG
Sbjct: 83 KMIYEALYG 91


>sp|MNTP_METBF|MANGANESE exporter MntP|Methanosarcina barkeri (strain Fusaro /

Query: 2 KNLYQAIYG 10
K +Y+A+YG
Sbjct: 83 KMIYEALYG 91


>sp|MNTP_METAC|MANGANESE exporter MntP|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KNLYQAIYG 10
K +Y+A+YG
Sbjct: 83 KMIYEALYG 91


>sp|Y1458_METJA|UNCHARACTERIZED protein MJ1458|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKNLYQAI 8
E+NLY+A+
Sbjct: 126 EENLYEAV 133


>sp|COBS_THEAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 NLYQAIYG 10
+LY AIYG
Sbjct: 41 SLYVAIYG 48


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKNLYQAIYG 10
+KNL AI+G
Sbjct: 535 DKNLIDAIFG 544


>sp|MALG_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 3 NLYQAIY 9
N YQA+Y
Sbjct: 136 NTYQALY 142


>sp|Y1674_SULAC|UNCHARACTERIZED protein Saci_1674|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EKNLYQAIYG 10
E NL+ A+YG
Sbjct: 197 EGNLWVALYG 206


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 EKNLYQAIYG 10
+K YQ YG
Sbjct: 252 QKEAYQTCYG 261




22|SequenceR|115|106|FKGITEKNLY

>sp|Y760_METJA|UNCHARACTERIZED protein MJ0760|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FKGITEKNL 9
F+GI EKNL
Sbjct: 241 FRGINEKNL 249


>sp|METK_METTM|S-ADENOSYLMETHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 GITEKNL 9
GITE+NL
Sbjct: 243 GITERNL 249


>sp|MNTP_METS3|MANGANESE exporter MntP|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 KGITEKNL 9
KG T+KNL
Sbjct: 26 KGFTQKNL 33


>sp|Y3534_METJA|UNCHARACTERIZED protein MJECL34|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GITEKNLY 10
G+TEK LY
Sbjct: 7 GLTEKKLY 14


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FKGITEKNLY 10
++GI +K LY
Sbjct: 458 YRGIDQKELY 467


>sp|T1SX_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 FKGITEKNL 9
FK IT+K+L
Sbjct: 360 FKAITKKDL 368


>sp|ARSA_METJA|PUTATIVE arsenical pump-driving ATPase|Methanocaldococcus jannaschii

Query: 1 FKGITEKNL 9
+GITEK L
Sbjct: 12 LRGITEKKL 20


>sp|BIOF_METVS|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus vannielii (strain

Query: 1 FKGITEKNLY 10
+GI ++NLY
Sbjct: 10 LQGIKDENLY 19




23|SequenceR|120|111|IDAQFFKGIT

>sp|GGR2_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanopyrus kandleri (strain AV19 /

Query: 1 IDAQFFKG 8
+DA+FF G
Sbjct: 192 VDAEFFPG 199


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 AQFFKGI 9
A+FFKG+
Sbjct: 94 AEFFKGL 100


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 AQFFKGI 9
A+FFKG+
Sbjct: 94 AEFFKGL 100


>sp|SYC_METAC|CYSTEINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 AQFFKGI 9
A+FFKG+
Sbjct: 94 AEFFKGL 100


>sp|AROA_KORCO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 IDAQFFKGI 9
I +QFF G+
Sbjct: 163 ISSQFFSGL 171




24|SequenceR|125|116|LANEAIDAQF

***** No hits found ******


25|SequenceR|130|121|ESSNKLANEA

***** No hits found ******


26|SequenceR|135|126|TPIETESSNK

***** No hits found ******


27|SequenceR|140|131|ALVSVTPIET

>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 2 LVSVTPIET 10
LVS+TP ET
Sbjct: 76 LVSITPSET 84


>sp|Y1112_PYRHO|UPF0127 protein PH1112|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ALVSVTPIET 10
ALV + P+ET
Sbjct: 36 ALVFILPLET 45




28|SequenceR|145|136|LFEEDALVSV

>sp|MTRA_METV3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus voltae (strain ATCC

Query: 2 FEEDALV 8
FEEDA+V
Sbjct: 160 FEEDAMV 166


>sp|MTRA1_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanobrevibacter ruminantium

Query: 2 FEEDALV 8
FEEDA+V
Sbjct: 159 FEEDAMV 165


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 FEEDALVSV 10
+EEDAL ++
Sbjct: 179 YEEDALAAI 187


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 FEEDALVSV 10
+EEDAL ++
Sbjct: 179 YEEDALAAI 187


>sp|MTRA2_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanobrevibacter ruminantium

Query: 2 FEEDALV 8
FEED+LV
Sbjct: 159 FEEDSLV 165




29|SequenceR|150|141|NEKFPLFEED

>sp|CORA_METJA|COBALT/MAGNESIUM transport protein CorA|Methanocaldococcus jannaschii (strain ATCC

Query: 3 KFPLFEED 10
K PLFEED
Sbjct: 79 KAPLFEED 86


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 NEKFPLFEED 10
N KFP ED
Sbjct: 233 NHKFPFVTED 242


>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 2 EKFPLFEE 9
E+FPL+ E
Sbjct: 405 ERFPLYPE 412


>sp|ENO_METM7|ENOLASE maripaludis (strain C7 /

Query: 5 PLFEED 10
PLFEED
Sbjct: 289 PLFEED 294


>sp|ENO_METM5|ENOLASE maripaludis (strain C5 /

Query: 5 PLFEED 10
PLFEED
Sbjct: 289 PLFEED 294


>sp|RIBL_THEVO|FAD synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NEKFPLFEED 10
N K P+F+E+
Sbjct: 44 NGKIPIFDEN 53


>sp|ENO_METMP|ENOLASE maripaludis (strain DSM 14266

Query: 5 PLFEED 10
PLFEED
Sbjct: 289 PLFEED 294


>sp|ENO3_METHJ|ENOLASE 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 PLFEED 10
PL+EED
Sbjct: 275 PLYEED 280


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 4 FPLFEED 10
FP+FE+D
Sbjct: 560 FPMFEDD 566


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 1 NEKFPLFEE 9
+E +P+FEE
Sbjct: 410 SESYPIFEE 418


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 1 NEKFPLFEE 9
+E +P+FEE
Sbjct: 310 SESYPIFEE 318


>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 EKFPLFEED 10
EKFPL E+
Sbjct: 28 EKFPLLTEE 36


>sp|RIBL_THEAC|FAD synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NEKFPLFEED 10
N K P+F+E+
Sbjct: 44 NGKVPIFDEN 53


>sp|IF2P_SACS2|PROBABLE translation initiation factor IF-2|Saccharolobus solfataricus

Query: 3 KFPLFEED 10
K+PL +ED
Sbjct: 499 KYPLIKED 506


>sp|PSB_METAR|PROTEASOME subunit beta|Methanocella arvoryzae (strain DSM 22066

Query: 2 EKFPLFEED 10
EKF +FE +
Sbjct: 192 EKFEIFERE 200


>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 3 KFPLFEE 9
K PLFEE
Sbjct: 138 KIPLFEE 144


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KFPLFEE 9
KFP FEE
Sbjct: 530 KFPKFEE 536


>sp|IF2P_IGNH4|PROBABLE translation initiation factor IF-2|Ignicoccus hospitalis (strain

Query: 3 KFPLFEED 10
K+PL +ED
Sbjct: 505 KYPLMKED 512


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 1 NEKFPLFEE 9
+E +P+FEE
Sbjct: 264 SEVYPIFEE 272


>sp|QUEC_THEAC|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EKFPLFEED 10
EK+P F +D
Sbjct: 223 EKYPTFYKD 231


>sp|PSA_THEKO|PROTEASOME subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NEKFPLFEED 10
NEK LFE D
Sbjct: 144 NEKPELFETD 153


>sp|PSA_THEK1|PROTEASOME subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 1 NEKFPLFEED 10
NEK LFE D
Sbjct: 144 NEKPELFETD 153


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 3 KFPLFEED 10
K+PL ED
Sbjct: 497 KYPLIRED 504


>sp|Y388_METJA|UNCHARACTERIZED protein MJ0388|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KFPLFE 8
K+PLFE
Sbjct: 77 KYPLFE 82


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 EKFPLFEED 10
EK+P + ED
Sbjct: 686 EKYPEYNED 694


>sp|SURE_METJA|5'-NUCLEOTIDASE SurE|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FPLFEED 10
+P+FEE+
Sbjct: 218 YPIFEEE 224


>sp|Y1914_METTH|UPF0425 pyridoxal phosphate-dependent protein

Query: 4 FPLFEED 10
FPL EED
Sbjct: 41 FPLEEED 47


>sp|Y832_PYRAB|UPF0128 protein PYRAB08320|Pyrococcus abyssi (strain GE5 /

Query: 1 NEKFPLFEED 10
+ KFPL +ED
Sbjct: 100 DTKFPLAKED 109


>sp|Y1314_PYRHO|UPF0128 protein PH1314|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KFPLFEED 10
KFPL +ED
Sbjct: 105 KFPLTKED 112


>sp|PSA_THESM|PROTEASOME subunit alpha|Thermococcus sibiricus (strain DSM 12597

Query: 1 NEKFPLFEED 10
NEK LFE D
Sbjct: 144 NEKPELFETD 153




30|SequenceR|155|146|VLDFTNEKFP

>sp|Y2143_SULTO|UPF0284 protein STK_21430|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LDFTNEKF 9
LDFTN KF
Sbjct: 288 LDFTNSKF 295


>sp|Y038_PYRAB|UPF0284 protein PYRAB00380|Pyrococcus abyssi (strain GE5 /

Query: 2 LDFTNEKF 9
LDF+N KF
Sbjct: 277 LDFSNSKF 284


>sp|DUT_METJA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Methanocaldococcus jannaschii

Query: 1 VLDFTNEK 8
V+DF+NEK
Sbjct: 40 VIDFSNEK 47


>sp|PELO_ARCFU|PROTEIN pelota homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LDFTNEKFP 10
LDF E++P
Sbjct: 201 LDFLKERYP 209


>sp|HDRB2_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 2 LDFTNEKF 9
LDF NEK
Sbjct: 99 LDFVNEKL 106


>sp|PANB_SACI7|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 VLDFTNEKFP 10
++D N KFP
Sbjct: 248 IIDVKNNKFP 257


>sp|PANB_SACI2|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 VLDFTNEKFP 10
++D N KFP
Sbjct: 248 IIDVKNNKFP 257


>sp|PANB_SACI6|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VLDFTNEKFP 10
++D N KFP
Sbjct: 248 IIDVKNNKFP 257


>sp|PANB_SACI4|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VLDFTNEKFP 10
++D N KFP
Sbjct: 248 IIDVKNNKFP 257


>sp|PANB_SACI3|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 VLDFTNEKFP 10
++D N KFP
Sbjct: 248 IIDVKNNKFP 257


>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DFTNEKFP 10
DF +KFP
Sbjct: 243 DFVQKKFP 250


>sp|PANB_SACI1|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 VLDFTNEKFP 10
++D N KFP
Sbjct: 248 IIDVKNNKFP 257


>sp|HIS7_METS3|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LDFTNEK 8
DFTNEK
Sbjct: 120 FDFTNEK 126


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 2 LDFTNEK 8
+DFTNEK
Sbjct: 351 VDFTNEK 357


>sp|TBP_METTH|TATA-BOX-BINDING protein|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LDFTNEKFP 10
+DF E+FP
Sbjct: 33 VDFNREQFP 41


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 2 LDFTNEKFP 10
LD+TN+ P
Sbjct: 703 LDYTNKAIP 711


>sp|PYRC_THEAC|DIHYDROOROTASE acidophilum (strain ATCC 25905

Query: 1 VLDFTNEKFP 10
V+D N +FP
Sbjct: 85 VMDMPNNRFP 94


>sp|TRUD_PYRHO|PROBABLE tRNA pseudouridine synthase D|Pyrococcus horikoshii (strain ATCC

Query: 2 LDFTNEK 8
LDF NEK
Sbjct: 306 LDFVNEK 312


>sp|PYRH_METM7|URIDYLATE kinase|Methanococcus maripaludis (strain C7 /

Query: 3 DFTNEKF 9
+FTNE F
Sbjct: 59 EFTNESF 65


>sp|Y671_SACI1|UPF0282 protein YN1551_0671|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LDFTNEKFP 10
L FT EK P
Sbjct: 186 LKFTKEKMP 194


>sp|Y2281_SACI2|UPF0282 protein LS215_2281|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LDFTNEKFP 10
L FT EK P
Sbjct: 186 LKFTKEKMP 194


>sp|Y2245_SACI7|UPF0282 protein YG5714_2245|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LDFTNEKFP 10
L FT EK P
Sbjct: 186 LKFTKEKMP 194


>sp|Y2198_SACI3|UPF0282 protein M1627_2198|Saccharolobus islandicus (strain M.16.27)

Query: 2 LDFTNEKFP 10
L FT EK P
Sbjct: 186 LKFTKEKMP 194


>sp|Y2116_SACI4|UPF0282 protein M1425_2116|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LDFTNEKFP 10
L FT EK P
Sbjct: 186 LKFTKEKMP 194


>sp|Y2122_SACI6|UPF0282 protein M164_2122|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LDFTNEKFP 10
L FT EK P
Sbjct: 186 LKFTKEKMP 194


>sp|Y3251_SACS2|UPF0282 protein SSO3251|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LDFTNEKFP 10
L FT EK P
Sbjct: 186 LKFTKEKMP 194


>sp|SUCC_HALSA|SUCCINATE--COA ligase [ADP-forming] subunit beta|Halobacterium salinarum (strain

Query: 2 LDFTNEKF 9
+DFTNE +
Sbjct: 94 VDFTNELY 101


>sp|SUCC_HALS3|SUCCINATE--COA ligase [ADP-forming] subunit beta|Halobacterium salinarum (strain

Query: 2 LDFTNEKF 9
+DFTNE +
Sbjct: 94 VDFTNELY 101


>sp|PYRH_METM5|URIDYLATE kinase|Methanococcus maripaludis (strain C5 /

Query: 3 DFTNEKF 9
+FTNE F
Sbjct: 59 EFTNESF 65


>sp|TMG10_ARCFU|TRNA (guanine(10)-N2)-dimethyltransferase|Archaeoglobus fulgidus

Query: 1 VLDFTNEKF 9
+LD+ EKF
Sbjct: 40 LLDYAGEKF 48




31|SequenceR|160|151|SLSSVVLDFT

***** No hits found ******


32|SequenceR|165|156|NVWHLSLSSV

>sp|COFG_METMJ|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VWHLSLSSV 10
V+HLSL+++
Sbjct: 89 VYHLSLAAI 97


>sp|PELO_METPE|PROTEIN pelota homolog|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 NVWHLS 6
++WHLS
Sbjct: 24 DIWHLS 29


>sp|Y2132_NATPD|UPF0173 metal-dependent hydrolase NP_2132A|Natronomonas pharaonis (strain

Query: 1 NVWHLSLSS 9
+ WH+S+ S
Sbjct: 9 STWHVSVGS 17




33|SequenceR|170|161|ARPLDNVWHL

>sp|PELO_METTP|PROTEIN pelota homolog|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ARPLDNVWHL 10
A LD++WHL
Sbjct: 19 AESLDDLWHL 28


>sp|PELO_THEON|PROTEIN pelota homolog|Thermococcus onnurineus (strain NA1)

Query: 1 ARPLDNVWHL 10
A LD++WHL
Sbjct: 17 AETLDDLWHL 26


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ARPLDNVWHL 10
A LD++WHL
Sbjct: 17 AETLDDLWHL 26


>sp|PELO_THEGJ|PROTEIN pelota homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ARPLDNVWHL 10
A LD++WHL
Sbjct: 17 AETLDDLWHL 26


>sp|PELO_PYRFU|PROTEIN pelota homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ARPLDNVWHL 10
A LD++WHL
Sbjct: 17 AETLDDLWHL 26


>sp|PELO_METMA|PROTEIN pelota homolog|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ARPLDNVWHL 10
A LD++WHL
Sbjct: 19 AETLDDLWHL 28


>sp|PELO_METBF|PROTEIN pelota homolog|Methanosarcina barkeri (strain Fusaro /

Query: 1 ARPLDNVWHL 10
A LD++WHL
Sbjct: 19 AETLDDLWHL 28


>sp|PELO_METAC|PROTEIN pelota homolog|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ARPLDNVWHL 10
A LD++WHL
Sbjct: 19 AETLDDLWHL 28


>sp|PELO_PYRHO|PROTEIN pelota homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 20 LDDLWHL 26


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 20 LDDLWHL 26


>sp|PELO_NATPD|PROTEIN pelota homolog|Natronomonas pharaonis (strain ATCC 35678

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 23 LDDLWHL 29


>sp|PELO_METVS|PROTEIN pelota homolog|Methanococcus vannielii (strain ATCC 35089

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 20 LDDLWHL 26


>sp|PELO_METTH|PROTEIN pelota homolog|Methanothermobacter thermautotrophicus (strain

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 20 LDDLWHL 26


>sp|PELO_METS3|PROTEIN pelota homolog|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 20 LDDLWHL 26


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 20 LDDLWHL 26


>sp|PELO_METMJ|PROTEIN pelota homolog|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 22 LDDLWHL 28


>sp|PELO_METM7|PROTEIN pelota homolog|Methanococcus maripaludis (strain C7 /

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 20 LDDLWHL 26


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 20 LDDLWHL 26


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 20 LDDLWHL 26


>sp|PELO_METKA|PROTEIN pelota homolog|Methanopyrus kandleri (strain AV19 /

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 20 LDDLWHL 26


>sp|PELO_METBU|PROTEIN pelota homolog|Methanococcoides burtonii (strain DSM 6242

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 23 LDDLWHL 29


>sp|PELO_METAR|PROTEIN pelota homolog|Methanocella arvoryzae (strain DSM 22066

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 22 LDDLWHL 28


>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 20 LDDLWHL 26


>sp|PELO_HALSA|PROTEIN pelota homolog|Halobacterium salinarum (strain ATCC 700922

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 23 LDDLWHL 29


>sp|PELO_HALS3|PROTEIN pelota homolog|Halobacterium salinarum (strain ATCC 29341

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 23 LDDLWHL 29


>sp|PELO_HALMA|PROTEIN pelota homolog|Haloarcula marismortui (strain ATCC 43049

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 23 LDDLWHL 29


>sp|PELO_ARCFU|PROTEIN pelota homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LDNVWHL 10
LD++WHL
Sbjct: 22 LDDLWHL 28


>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PLDNVWH 9
P D +WH
Sbjct: 250 PFDRLWH 256


>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain DSM

Query: 1 ARPLDNVW 8
ARPL +W
Sbjct: 235 ARPLPKIW 242


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 3 PLDNVWH 9
P D +WH
Sbjct: 247 PYDRLWH 253


>sp|PUR5_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RPLDNV 7
RP+DNV
Sbjct: 105 RPMDNV 110


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RPLDNVWH 9
R DN WH
Sbjct: 977 RDTDNEWH 984


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ARPLDNVW 8
ARP+D W
Sbjct: 322 ARPMDIEW 329


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ARPLDNVWHL 10
A P D WH
Sbjct: 111 ALPRDKKWHF 120


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ARPLDNVWHL 10
A P D WH
Sbjct: 111 ALPRDKKWHF 120


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 ARPLDNVWHL 10
A P D WH
Sbjct: 111 ALPRDKKWHF 120


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 ARPLDNVW 8
ARP D VW
Sbjct: 133 ARPGDLVW 140


>sp|AATA_THESI|A-TYPE ATP synthase subunit A|Thermococcus sp. (strain KI)

Query: 1 ARPLDNVWHL 10
A P D WH
Sbjct: 108 ALPRDKKWHF 117


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 1 ARPLDNVWHL 10
A P D WH
Sbjct: 108 ALPRDKKWHF 117


>sp|AATA_THEKO|A-TYPE ATP synthase subunit A|Thermococcus kodakarensis (strain ATCC

Query: 1 ARPLDNVWHL 10
A P D WH
Sbjct: 108 ALPRDKKWHF 117


>sp|RL3_NATPD|LARGE ribosomal subunit protein uL3|Natronomonas pharaonis (strain ATCC

Query: 2 RPLDNVW 8
RPL VW
Sbjct: 96 RPLTEVW 102


>sp|AATA_THEGJ|A-TYPE ATP synthase subunit A|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ARPLDNVWHL 10
A P D WH
Sbjct: 108 ALPRDKKWHF 117


>sp|AATA_THEON|A-TYPE ATP synthase subunit A|Thermococcus onnurineus (strain NA1)

Query: 1 ARPLDNVWHL 10
A P D WH
Sbjct: 108 ALPRDKKWHF 117


>sp|KAD6_PYRAE|PUTATIVE adenylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 LDNVW 8
LDNVW
Sbjct: 117 LDNVW 121


>sp|THPS_SULAC|THERMOPSIN acidocaldarius (strain ATCC 33909

Query: 4 LDNVWH 9
+DNVW+
Sbjct: 143 IDNVWN 148


>sp|Y1214_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 3 PLDNVW 8
P+D++W
Sbjct: 124 PIDDIW 129


>sp|RL3_HALMA|LARGE ribosomal subunit protein uL3|Haloarcula marismortui (strain ATCC

Query: 2 RPLDNVW 8
RPL VW
Sbjct: 96 RPLTEVW 102




34|SequenceR|175|166|HIQELARPLD

>sp|MTSB_METMA|METHYLATED-THIOL--CORRINOID protein MtsB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HIQELARPLD 10
HI+E +RP D
Sbjct: 51 HIKEQSRPKD 60


>sp|Y3524_METAC|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina

Query: 4 ELARPLD 10
ELARP+D
Sbjct: 182 ELARPID 188


>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain DSM

Query: 2 IQELARPL 9
I+E+ARPL
Sbjct: 231 IEEIARPL 238


>sp|Y444_METMA|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina mazei

Query: 4 ELARPLD 10
ELA+P+D
Sbjct: 182 ELAKPID 188


>sp|TPIS_PYRCJ|TRIOSEPHOSPHATE isomerase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 IQELARPL 9
I ELA+PL
Sbjct: 215 IMELAKPL 222


>sp|TPIS_PYRAR|TRIOSEPHOSPHATE isomerase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 IQELARPL 9
I ELA+PL
Sbjct: 215 IMELAKPL 222




35|SequenceR|180|171|PKLIYHIQEL

>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PKLIYHIQ 8
P LIYH++
Sbjct: 295 PVLIYHVK 302


>sp|TBP_THEAC|TATA-BOX-BINDING protein|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PKLIYHIQE 9
P LIY +QE
Sbjct: 42 PGLIYRLQE 50


>sp|TBP_PICTO|TATA-BOX-BINDING protein|Picrophilus torridus (strain ATCC 700027

Query: 1 PKLIYHIQE 9
P LIY +QE
Sbjct: 42 PGLIYRLQE 50


>sp|PMDHL_METTH|PHOSPHOMEVALONATE dehydratase large subunit|Methanothermobacter thermautotrophicus

Query: 1 PKLIYHIQE 9
P+ YH+QE
Sbjct: 177 PEYGYHLQE 185


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PKLIYHIQE 9
PK++ H+QE
Sbjct: 826 PKIVKHLQE 834


>sp|CDPAS_PYRAE|CDP-ARCHAEOL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PKLIYHI 7
P L+YH+
Sbjct: 68 PNLVYHV 74


>sp|TRUA_METS3|TRNA pseudouridine synthase A|Methanobrevibacter smithii (strain ATCC

Query: 2 KLIYHIQEL 10
+LIYH+++L
Sbjct: 30 ELIYHLRKL 38


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PKLIYHIQE 9
PK+I H++E
Sbjct: 379 PKIIEHLRE 387


>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PKLIYHIQEL 10
PK+ HI+E+
Sbjct: 110 PKVTTHIKEI 119


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PKLIYHIQ 8
P+L YHI+
Sbjct: 375 PRLPYHIE 382


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 PKLIYHIQEL 10
PK++ H+ +L
Sbjct: 259 PKILRHVDKL 268




36|SequenceR|185|176|IFVGDPKLIY

>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FVGDPKLIY 10
F GDP L+Y
Sbjct: 199 FRGDPSLLY 207


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IFVGDPKLI 9
IF G PKLI
Sbjct: 823 IFKGTPKLI 831


>sp|PCNA_META3|DNA polymerase sliding clamp|Methanococcus aeolicus (strain ATCC

Query: 3 VGDPKLIY 10
+GD KLIY
Sbjct: 232 IGDTKLIY 239


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 1 IFVGDPKLIY 10
IF+ DPK Y
Sbjct: 364 IFIKDPKSRY 373


>sp|RS3A_HALLT|SMALL ribosomal subunit protein eS1|Halorubrum lacusprofundi (strain ATCC

Query: 4 GDPKLIY 10
GD KLIY
Sbjct: 169 GDAKLIY 175


>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 1 IFVGDPKLIY 10
+F DP+LI+
Sbjct: 411 LFTEDPELIF 420


>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 3 VGDPKLI 9
VGDP L+
Sbjct: 192 VGDPSLV 198


>sp|Y821_METJA|PUTATIVE uncharacterized protein MJ0821|Methanocaldococcus jannaschii

Query: 1 IFVGDPKLIY 10
I G+P LIY
Sbjct: 16 IIEGEPNLIY 25


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GDPKLI 9
GDPKL+
Sbjct: 272 GDPKLL 277


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 FVGDPKLI 9
F GDP L+
Sbjct: 198 FCGDPSLL 205


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 1 IFVGDPKLIY 10
I G+P LIY
Sbjct: 23 IIEGEPNLIY 32


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 IFVGDP 6
I+VGDP
Sbjct: 576 IYVGDP 581


>sp|RS2_PYRIL|SMALL ribosomal subunit protein uS2|Pyrobaculum islandicum (strain DSM

Query: 1 IFVGDPKL 8
+FV DPKL
Sbjct: 121 LFVVDPKL 128


>sp|HISX_SULAC|HISTIDINOL dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IFVGDPK 7
+FV DPK
Sbjct: 297 LFVNDPK 303


>sp|RS2_PYRAR|SMALL ribosomal subunit protein uS2|Pyrobaculum arsenaticum (strain DSM

Query: 1 IFVGDPKL 8
+FV DPKL
Sbjct: 121 LFVVDPKL 128


>sp|RS2_PYRAE|SMALL ribosomal subunit protein uS2|Pyrobaculum aerophilum (strain ATCC

Query: 1 IFVGDPKL 8
+FV DPKL
Sbjct: 121 LFVVDPKL 128


>sp|RS2_PYRNV|SMALL ribosomal subunit protein uS2|Pyrobaculum neutrophilum (strain DSM

Query: 1 IFVGDPKL 8
+FV DPKL
Sbjct: 120 LFVVDPKL 127


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 IFVGDPK 7
IFV DPK
Sbjct: 13 IFVPDPK 19




37|SequenceR|190|181|GFMAGIFVGD

>sp|VAPC6_METJA|RIBONUCLEASE VapC6|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MAGIFVGD 10
M G+F+GD
Sbjct: 13 MVGLFIGD 20


>sp|Y165_METJA|UNCHARACTERIZED protein MJ0165|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GFMAGIFVG 9
GF AG+F G
Sbjct: 240 GFGAGVFAG 248


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GFMAGIFVGD 10
F+ G F+GD
Sbjct: 1225 AFLEGYFIGD 1234


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 GFMAGIFVGD 10
F+ G F+GD
Sbjct: 866 AFLEGYFIGD 875


>sp|Y297_METJA|UNCHARACTERIZED protein MJ0297|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GFMAGIFVG 9
GF+ G F+G
Sbjct: 173 GFVTGTFIG 181


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 GFMAGIFVGD 10
F+ G F+GD
Sbjct: 832 AFIEGYFIGD 841


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 FMAGIFVGD 10
F+AG+F D
Sbjct: 363 FLAGLFAAD 371


>sp|COBD_PYRAB|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus abyssi (strain GE5

Query: 1 GFMAGIFV 8
GF+AG FV
Sbjct: 48 GFLAGAFV 55


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 FMAGIFVGD 10
+ G+F+GD
Sbjct: 10 LLVGVFIGD 18


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 2 FMAGIFVGD 10
F+AG+F D
Sbjct: 357 FLAGLFAAD 365


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GFMAGIFVGD 10
FM G++ GD
Sbjct: 516 AFMDGLYSGD 525


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 GFMAGIFVGD 10
F G F+GD
Sbjct: 863 AFFEGYFIGD 872


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GFMAGIFVG 9
G M GIF G
Sbjct: 79 GLMGGIFDG 87


>sp|PFDA_PYRCJ|PREFOLDIN subunit alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 AGIFVG 9
AGIFVG
Sbjct: 62 AGIFVG 67


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 GFMAGIFVGD 10
G M G+ VGD
Sbjct: 326 GLMMGVEVGD 335




38|SequenceR|195|186|YLTDGGFMAG

>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 1 YLTDGGFMAG 10
YLT G MAG
Sbjct: 300 YLTKGDLMAG 309


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 YLTDGGFMAG 10
YLT G MAG
Sbjct: 301 YLTKGDLMAG 310


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YLTDGGFMAG 10
YLT G MAG
Sbjct: 301 YLTKGDLMAG 310


>sp|IF2G_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 YLTDGGFMAG 10
YLT G MAG
Sbjct: 301 YLTKGDLMAG 310


>sp|LYSZ_PYRFU|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrococcus furiosus

Query: 1 YLTDGGFMAG 10
+L+D FMAG
Sbjct: 187 FLSDTAFMAG 196


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 2 LTDGGFMAG 10
LTDG ++AG
Sbjct: 538 LTDGVYLAG 546


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 2 LTDGGFMAG 10
LTDG ++AG
Sbjct: 539 LTDGVYLAG 547


>sp|FLPA_AERPE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 1 YLTDGGFM 8
+L DGG+M
Sbjct: 171 FLRDGGYM 178


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 YLTDGGFMAG 10
+LT G MAG
Sbjct: 300 FLTKGDLMAG 309


>sp|PYRH_SACI7|URIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LTDGGFMAG 10
LTD GF G
Sbjct: 30 LTDNGFRVG 38


>sp|PYRH_SACI6|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LTDGGFMAG 10
LTD GF G
Sbjct: 30 LTDNGFRVG 38


>sp|PYRH_SACI4|URIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LTDGGFMAG 10
LTD GF G
Sbjct: 30 LTDNGFRVG 38


>sp|PYRH_SACI2|URIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LTDGGFMAG 10
LTD GF G
Sbjct: 30 LTDNGFRVG 38


>sp|PYRH_SACI1|URIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LTDGGFMAG 10
LTD GF G
Sbjct: 30 LTDNGFRVG 38


>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YLTDGGFMA 9
+L D G+MA
Sbjct: 363 FLEDSGYMA 371


>sp|BIOF_METVS|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus vannielii (strain

Query: 3 TDGGFMAG 10
T GGF++G
Sbjct: 230 TSGGFVSG 237


>sp|HACB_METMA|METHANOGEN homoaconitase small subunit|Methanosarcina mazei (strain ATCC

Query: 2 LTDGGFMA 9
LTDGG +A
Sbjct: 148 LTDGGLVA 155


>sp|GLNA3_HALMT|GLUTAMINE synthetase 3|Haloferax mediterranei (strain ATCC 33500

Query: 2 LTDGGFMA 9
LTDGG A
Sbjct: 7 LTDGGLSA 14


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LTDGGFMA 9
+TDGG+ A
Sbjct: 190 ITDGGYEA 197


>sp|HIS1_ARCFU|ATP phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YLTDGGF 7
YLT+ GF
Sbjct: 201 YLTENGF 207


>sp|Y484_METMA|PROTEIN MM_0484|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LTDGGFMAG 10
LT+GG + G
Sbjct: 51 LTEGGLLRG 59


>sp|KAE1_NANEQ|TRNA N6-adenosine threonylcarbamoyltransferase|Nanoarchaeum equitans

Query: 1 YLTDGGFM 8
YLTD G M
Sbjct: 280 YLTDNGAM 287


>sp|TMG10_METTL|PROBABLE tRNA (guanine(10)-N2)-dimethyltransferase|Methanothermococcus

Query: 1 YLTDGGFMA 9
+L +GGFM
Sbjct: 28 FLIEGGFMG 36




39|SequenceR|200|191|SCRLEYLTDG

>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 2 CRLEYLTDG 10
C EYL DG
Sbjct: 356 CDAEYLADG 364


>sp|Y834_METJA|UNCHARACTERIZED protein MJ0834|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SCRLEYLTDG 10
SC+LE++ +G
Sbjct: 114 SCQLEWILEG 123


>sp|DNLI1_KORCO|DNA ligase 1|Korarchaeum cryptofilum (strain OPF8)

Query: 2 CRLEYLTDG 10
C LEY DG
Sbjct: 231 CALEYKLDG 239


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 1 SCRLEYLTDG 10
S LEY+ DG
Sbjct: 181 SSPLEYIVDG 190


>sp|PURA_HALSA|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 3 RLEYLTDG 10
RLEYL D
Sbjct: 158 RLEYLVDA 165


>sp|PURA_HALS3|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 3 RLEYLTDG 10
RLEYL D
Sbjct: 158 RLEYLVDA 165


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 4 LEYLTDG 10
LEY+ DG
Sbjct: 184 LEYIVDG 190


>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 2 CRLEYLTD 9
C LEY+ D
Sbjct: 112 CYLEYIPD 119




40|SequenceR|205|196|EALQLSCRLE

>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EALQLSCRLE 10
EA QL CRLE
Sbjct: 344 EAFQLLCRLE 353


>sp|RS28_HALLT|SMALL ribosomal subunit protein eS28|Halorubrum lacusprofundi (strain

Query: 1 EALQLSCRLE 10
EA+Q+ CR++
Sbjct: 27 EAMQVKCRIQ 36


>sp|RS28_HALSA|SMALL ribosomal subunit protein eS28|Halobacterium salinarum (strain

Query: 1 EALQLSCRLE 10
EA+Q+ CR++
Sbjct: 27 EAMQVKCRIQ 36


>sp|RS28_HALS3|SMALL ribosomal subunit protein eS28|Halobacterium salinarum (strain

Query: 1 EALQLSCRLE 10
EA+Q+ CR++
Sbjct: 27 EAMQVKCRIQ 36


>sp|DPHB_SACS2|DIPHTHINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EALQLSCRLE 10
EALQ+ RLE
Sbjct: 181 EALQILLRLE 190


>sp|DPHB_SACI7|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EALQLSCRLE 10
EALQ+ RLE
Sbjct: 181 EALQILLRLE 190


>sp|DPHB_SACI6|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EALQLSCRLE 10
EALQ+ RLE
Sbjct: 181 EALQILLRLE 190


>sp|DPHB_SACI4|DIPHTHINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EALQLSCRLE 10
EALQ+ RLE
Sbjct: 181 EALQILLRLE 190


>sp|DPHB_SACI3|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 EALQLSCRLE 10
EALQ+ RLE
Sbjct: 181 EALQILLRLE 190


>sp|DPHB_SACI2|DIPHTHINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EALQLSCRLE 10
EALQ+ RLE
Sbjct: 181 EALQILLRLE 190


>sp|DPHB_SACI1|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 EALQLSCRLE 10
EALQ+ RLE
Sbjct: 181 EALQILLRLE 190


>sp|RS28_NATPD|SMALL ribosomal subunit protein eS28|Natronomonas pharaonis (strain

Query: 1 EALQLSCRLE 10
EA+Q+ CR++
Sbjct: 28 EAMQVKCRIQ 37


>sp|Y1337_METJA|UNCHARACTERIZED protein MJ1337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EALQLSCRL 9
EAL L C++
Sbjct: 191 EALSLGCKI 199


>sp|RS28_HALWD|SMALL ribosomal subunit protein eS28|Haloquadratum walsbyi (strain DSM

Query: 1 EALQLSCRL 9
EA+Q+ CR+
Sbjct: 27 EAMQVKCRI 35




41|SequenceR|210|201|GERETEALQL

>sp|CHED_METHJ|PROBABLE chemoreceptor glutamine deamidase CheD|Methanospirillum hungatei

Query: 1 GERETEALQ 9
GER EAL+
Sbjct: 113 GERNAEALK 121




42|SequenceR|215|206|HPSFGGERET

>sp|RS3A_PICTO|SMALL ribosomal subunit protein eS1|Picrophilus torridus (strain ATCC

Query: 2 PSFGGERE 9
PSF GERE
Sbjct: 24 PSFLGERE 31


>sp|Y2149_ARCFU|UPF0111 protein AF_2149|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 FGGERE 9
FGGERE
Sbjct: 10 FGGERE 15


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain

Query: 1 HPSFGGERE 9
+PSFGG+ E
Sbjct: 21 NPSFGGKGE 29


>sp|PRIL_METTH|DNA primase large subunit PriL|Methanothermobacter thermautotrophicus

Query: 4 FGGERE 9
FGGERE
Sbjct: 132 FGGERE 137


>sp|GGPS_SULAC|GERANYLGERANYL diphosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 FGGERE 9
FGG+RE
Sbjct: 57 FGGQRE 62


>sp|CH60_METMA|CHAPERONIN GroEL|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PSFGGERE 9
P FG ER+
Sbjct: 278 PGFGNERK 285


>sp|CH60_METBF|CHAPERONIN GroEL|Methanosarcina barkeri (strain Fusaro /

Query: 2 PSFGGERE 9
P FG ER+
Sbjct: 278 PGFGNERK 285


>sp|CH60_METAC|CHAPERONIN GroEL|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PSFGGERE 9
P FG ER+
Sbjct: 278 PGFGNERK 285


>sp|XAD_HALVD|D-XYLONATE dehydratase|Haloferax volcanii (strain ATCC 29605

Query: 2 PSFGGERET 10
P GG RET
Sbjct: 307 PRVGGMRET 315


>sp|SYY_METMJ|TYROSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 FGGERE 9
FGG+RE
Sbjct: 267 FGGDRE 272


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 1 HPSFGGERE 9
HP GGE E
Sbjct: 107 HPYIGGEVE 115


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 1 HPSFGGERE 9
HP GERE
Sbjct: 105 HPYVVGERE 113




43|SequenceR|220|211|TFPSIHPSFG

>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 1 TFPSIHPSFG 10
++P I P+FG
Sbjct: 34 SYPRIKPAFG 43


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PSIHPSFG 10
P++ PSFG
Sbjct: 255 PAVDPSFG 262


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 FPSIHP 7
FP++HP
Sbjct: 106 FPTVHP 111


>sp|MCRG_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain

Query: 2 FPSIHP 7
+PS+HP
Sbjct: 49 YPSVHP 54


>sp|MCRG_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 2 FPSIHP 7
+PS+HP
Sbjct: 49 YPSVHP 54


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PSIHPS 8
PS+HPS
Sbjct: 439 PSLHPS 444


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TFPSIHPSFG 10
++P I P FG
Sbjct: 34 SYPRIKPVFG 43


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 1 TFPSIHPSFG 10
++P I P FG
Sbjct: 34 SYPRIKPVFG 43


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 1 TFPSIHPSFG 10
++P I P FG
Sbjct: 34 SYPRIKPVFG 43


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 3 PSIHPSF 9
P++HP F
Sbjct: 60 PTVHPRF 66


>sp|THIOL_METJA|ACETYL-COA acetyltransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FPSIHPSFG 10
FP+++PS G
Sbjct: 322 FPAVNPSGG 330


>sp|MCRG_METFE|METHYL-COENZYME M reductase subunit gamma|Methanothermus fervidus

Query: 2 FPSIHP 7
+PS+HP
Sbjct: 49 YPSVHP 54


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TFPSIHPSFG 10
++P I P FG
Sbjct: 34 SYPRIKPIFG 43


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 3 PSIHPSF 9
PS+HP +
Sbjct: 290 PSLHPDY 296


>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 FPSIHP 7
PSIHP
Sbjct: 178 LPSIHP 183


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain

Query: 4 SIHPSFG 10
S++PSFG
Sbjct: 19 SVNPSFG 25


>sp|Y759_PYRIL|UPF0210 protein Pisl_0759|Pyrobaculum islandicum (strain DSM 4184

Query: 1 TFPSIHPSFG 10
T P+I P+ G
Sbjct: 31 TLPAIRPTVG 40


>sp|TRUA_METPE|TRNA pseudouridine synthase A|Methanosphaerula palustris (strain ATCC

Query: 3 PSIHPSF 9
PS HP F
Sbjct: 97 PSFHPRF 103


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 6 HPSFG 10
HPSFG
Sbjct: 27 HPSFG 31


>sp|FWDC_METMI|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 3 PSIHPSFG 10
P IHP+ G
Sbjct: 178 PGIHPNGG 185


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 5 IHPSFG 10
+HP FG
Sbjct: 317 VHPKFG 322


>sp|Y1079_METJA|UNCHARACTERIZED protein MJ1079|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FPSIHPS 8
FP IHP+
Sbjct: 20 FPGIHPN 26


>sp|COFH_HALSA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Halobacterium salinarum (strain ATCC

Query: 5 IHPSFG 10
+HP+FG
Sbjct: 143 LHPAFG 148




44|SequenceR|225|216|LDNVATFPSI

>sp|MBD_PICTO|MEVALONATE 3,5-bisphosphate decarboxylase|Picrophilus torridus (strain ATCC

Query: 2 DNVATFPSI 10
+N+A FPSI
Sbjct: 58 NNIANFPSI 66


>sp|GLNA3_HALMT|GLUTAMINE synthetase 3|Haloferax mediterranei (strain ATCC 33500

Query: 2 DNVATFPSI 10
DNVATF S+
Sbjct: 220 DNVATFRSV 228


>sp|GLNA_HALVD|GLUTAMINE synthetase|Haloferax volcanii (strain ATCC 29605

Query: 2 DNVATFPSI 10
DNVATF S+
Sbjct: 220 DNVATFRSV 228


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DNVATFPSI 10
DNV +FP I
Sbjct: 200 DNVLSFPPI 208


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DNVATFPSI 10
DNV +FP I
Sbjct: 200 DNVLSFPPI 208


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 DNVATFPSI 10
DNV +FP I
Sbjct: 200 DNVLSFPPI 208


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DNVATFPSI 10
DNV +FP +
Sbjct: 202 DNVLSFPPV 210


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NVATFPSI 10
NVAT P I
Sbjct: 51 NVATMPGI 58


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 1 LDNVATFPSI 10
+DNV FP +
Sbjct: 134 VDNVPAFPLV 143


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 NVATFPSI 10
+ ATFPS+
Sbjct: 708 HAATFPSV 715


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 NVATFPSI 10
+ ATFPS+
Sbjct: 708 HAATFPSV 715


>sp|GLNA_HALSA|GLUTAMINE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DNVATFPSI 10
DN+ATF ++
Sbjct: 218 DNIATFRAV 226




45|SequenceR|230|221|GLLHGLDNVA

>sp|NADA_METBF|QUINOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GLLHGLDNVA 10
GLLHGL A
Sbjct: 236 GLLHGLHKAA 245


>sp|PYLS_METBU|PYRROLYSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GLLHGLDN 8
GLLHG+ N
Sbjct: 21 GLLHGIRN 28


>sp|SYY_METS3|TYROSINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LLHGLDNVA 10
LLHGLD A
Sbjct: 204 LLHGLDGDA 212


>sp|NADA1_METAC|QUINOLINATE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GLLHGLDNVA 10
GL+HGL A
Sbjct: 236 GLIHGLHKAA 245


>sp|SEPS_METKA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 LLHGLDNV 9
+LHG+D+V
Sbjct: 346 VLHGIDDV 353


>sp|HPCAL_NITMS|3-HYDROXYPROPIONATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GLLHGLDNVA 10
G+ GLDNVA
Sbjct: 75 GVKVGLDNVA 84


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 4 HGLDNV 9
HG+DNV
Sbjct: 296 HGVDNV 301


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 1 GLLHGLD 7
GLL+GLD
Sbjct: 531 GLLNGLD 537


>sp|Y738_METTH|UNCHARACTERIZED protein MTH_738|Methanothermobacter thermautotrophicus (strain

Query: 3 LHGLDNVA 10
L GLDNV+
Sbjct: 72 LSGLDNVS 79


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GLLHGLD 7
GL+HGL+
Sbjct: 137 GLVHGLE 143


>sp|Y366_METJA|UNCHARACTERIZED protein MJ0366|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLHGLDNV 9
LLH L+NV
Sbjct: 29 LLHKLENV 36


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 1 GLLHGLD 7
GLL GLD
Sbjct: 256 GLLRGLD 262


>sp|NADA_METMA|QUINOLINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GLLHGL 6
GL+HGL
Sbjct: 236 GLIHGL 241


>sp|GLYA_CENSY|SERINE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 GLLHGLD 7
GL+HGL+
Sbjct: 138 GLVHGLE 144




46|SequenceR|235|226|NFGARGLLHG

>sp|IF2A_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 1 NFGARGLL 8
NFGA G+L
Sbjct: 22 NFGANGIL 29


>sp|IF2A_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 NFGARGLL 8
NFGA G+L
Sbjct: 22 NFGANGVL 29


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FGARGLLHG 10
FG G LHG
Sbjct: 459 FGGAGPLHG 467


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 2 FGARGLLH 9
+G +GLLH
Sbjct: 328 YGLKGLLH 335


>sp|THII_THEKO|PROBABLE tRNA sulfurtransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 FGARGLLHG 10
FGA+G++ G
Sbjct: 283 FGAKGIVMG 291


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 FGARGLL 8
FG RGLL
Sbjct: 473 FGERGLL 479


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 5 RGLLHG 10
RGLLHG
Sbjct: 334 RGLLHG 339


>sp|CARA_METS5|CARBAMOYL phosphate synthase small chain|Metallosphaera sedula (strain ATCC

Query: 2 FGARGLLHG 10
FGA+G+ +G
Sbjct: 25 FGAKGVRYG 33


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FGARGLLHG 10
FGA+ +L+G
Sbjct: 68 FGAKNVLNG 76




47|SequenceR|240|231|DVTLTNFGAR

>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 TLTNFGAR 10
TLTNFG R
Sbjct: 487 TLTNFGKR 494


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 3 TLTNFGAR 10
TLTNFG R
Sbjct: 494 TLTNFGKR 501


>sp|THSB_DESM0|CHAPERONIN subunit beta|Desulfurococcus mucosus (strain ATCC 35584

Query: 1 DVTLTNFGA 9
DVT+TN GA
Sbjct: 59 DVTITNDGA 67


>sp|THSA_SULTO|CHAPERONIN subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DVTLTNFGA 9
DVT+TN GA
Sbjct: 55 DVTITNDGA 63


>sp|THSA_SULAC|CHAPERONIN subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DVTLTNFGA 9
DVT+TN GA
Sbjct: 54 DVTITNDGA 62


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DVTLTNFGA 9
DVT+TN GA
Sbjct: 54 DVTITNDGA 62


>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 1 DVTLTNFGA 9
DVT+TN GA
Sbjct: 54 DVTITNDGA 62


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 1 DVTLTNFGA 9
D+T+TN GA
Sbjct: 65 DITITNNGA 73


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VTLTNFGAR 10
+TLT FG R
Sbjct: 488 ITLTRFGRR 496


>sp|THSG_SACS2|CHAPERONIN subunit gamma|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DVTLTNFGA 9
DVT+TN GA
Sbjct: 50 DVTITNDGA 58


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DVTLTNFGA 9
D+T+TN GA
Sbjct: 64 DITITNDGA 72


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DVTLTNFGA 9
D+T+TN GA
Sbjct: 65 DITITNDGA 73


>sp|THSB_SULAC|CHAPERONIN subunit beta|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DVTLTNFGA 9
D+T+TN GA
Sbjct: 65 DITITNDGA 73


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 1 DVTLTNFGA 9
D+T+TN GA
Sbjct: 64 DITITNDGA 72


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 4 LTNFGAR 10
LTNFG R
Sbjct: 495 LTNFGKR 501


>sp|THSA_AERPE|THERMOSOME subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 DVTLTNFGA 9
D+T+TN GA
Sbjct: 57 DITVTNDGA 65


>sp|THSG_SACSH|CHAPERONIN subunit gamma|Saccharolobus shibatae (strain ATCC 51178

Query: 1 DVTLTNFGA 9
D+T+TN GA
Sbjct: 50 DITITNDGA 58


>sp|MCH_METHJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DVTLTNFG 8
DVTL +FG
Sbjct: 306 DVTLKSFG 313


>sp|RTCA_PYRNV|RNA 3'-terminal phosphate cyclase|Pyrobaculum neutrophilum (strain DSM

Query: 4 LTNFGAR 10
LT FGAR
Sbjct: 141 LTRFGAR 147


>sp|MCH_METB6|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoregula boonei (strain DSM 21154

Query: 1 DVTLTNFG 8
DVTL +FG
Sbjct: 305 DVTLKSFG 312


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVTLTNFG 8
DVT+TN G
Sbjct: 314 DVTITNNG 321




48|SequenceR|245|236|QIEDTDVTLT

>sp|Y206_METKA|UPF0280 protein MK0206|Methanopyrus kandleri (strain AV19 /

Query: 2 IEDTDVTL 9
IE+TDVT+
Sbjct: 8 IEETDVTI 15


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus

Query: 1 QIEDTDVTL 9
Q+ED VTL
Sbjct: 65 QVEDMKVTL 73




49|SequenceR|250|241|GPYNVQIEDT

>sp|IXTPA_METTM|DITP/XTP pyrophosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 1 GPYNVQIEDT 10
GPY+ ++DT
Sbjct: 77 GPYSAYVQDT 86


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 2 PYNVQIED 9
PYNV+++D
Sbjct: 86 PYNVRLKD 93


>sp|Y1631_HALSA|PUTATIVE ABC transporter ATP-binding protein|Halobacterium salinarum (strain

Query: 1 GPYNVQIEDT 10
GP N IEDT
Sbjct: 102 GPRNAGIEDT 111


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 2 PYNVQIED 9
PYNV+++D
Sbjct: 91 PYNVRLKD 98


>sp|RSMA_SACS2|PROBABLE ribosomal RNA small subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 YNVQIED 9
YN+QI+D
Sbjct: 110 YNIQIKD 116


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 GPYNVQ 6
GP+NVQ
Sbjct: 818 GPFNVQ 823


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 GPYNVQ 6
GP+NVQ
Sbjct: 818 GPFNVQ 823


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 GPYNVQ 6
GP+NVQ
Sbjct: 804 GPFNVQ 809


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 GPYNVQ 6
GP+NVQ
Sbjct: 817 GPFNVQ 822


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 GPYNVQ 6
GP+NVQ
Sbjct: 817 GPFNVQ 822


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 GPYNVQ 6
GP+NVQ
Sbjct: 817 GPFNVQ 822


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 GPYNVQ 6
GP+NVQ
Sbjct: 817 GPFNVQ 822


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 GPYNVQ 6
GP+NVQ
Sbjct: 817 GPFNVQ 822


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 GPYNVQ 6
GP+NVQ
Sbjct: 817 GPFNVQ 822


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 GPYNVQ 6
GP+NVQ
Sbjct: 817 GPFNVQ 822


>sp|SUI1_METMJ|PROTEIN translation factor SUI1 homolog|Methanoculleus marisnigri (strain

Query: 2 PYNVQIED 9
PY++ +ED
Sbjct: 49 PYDIDLED 56


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 GPYNVQ 6
GP+N+Q
Sbjct: 825 GPFNIQ 830


>sp|KCY_METVS|CYTIDYLATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 3 YNVQIED 9
YN++I+D
Sbjct: 141 YNIEIDD 147


>sp|KCY_METMP|CYTIDYLATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 YNVQIED 9
YN++I+D
Sbjct: 141 YNIEIDD 147


>sp|KCY_METM5|CYTIDYLATE kinase|Methanococcus maripaludis (strain C5 /

Query: 3 YNVQIED 9
YN++I+D
Sbjct: 141 YNIEIDD 147


>sp|SUI1_METLZ|PROTEIN translation factor SUI1 homolog|Methanocorpusculum labreanum

Query: 2 PYNVQIED 9
PY + +ED
Sbjct: 49 PYEIDLED 56


>sp|NTPTH_METBF|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanosarcina barkeri (strain Fusaro /

Query: 1 GPYNVQIED 9
G Y+V +ED
Sbjct: 74 GKYHVNLED 82


>sp|KCY_METM6|CYTIDYLATE kinase|Methanococcus maripaludis (strain C6 /

Query: 3 YNVQIED 9
YN++I+D
Sbjct: 141 YNIEIDD 147


>sp|KCY_METM7|CYTIDYLATE kinase|Methanococcus maripaludis (strain C7 /

Query: 3 YNVQIED 9
YN++I+D
Sbjct: 141 YNIEIDD 147


>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii (strain

Query: 1 GPYNVQIED 9
G +NV++ED
Sbjct: 102 GCFNVKLED 110


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GPYNVQIEDT 10
G Y ++IEDT
Sbjct: 133 GKYILRIEDT 142


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPYNVQIED 9
G Y V++ED
Sbjct: 562 GDYRVEVED 570


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GPYNVQIED 9
G Y V++ED
Sbjct: 562 GDYRVEVED 570


>sp|KCY_NATPD|CYTIDYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 YNVQIED 9
YN+ IED
Sbjct: 139 YNIDIED 145


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 GPYNVQIEDT 10
G Y ++IEDT
Sbjct: 134 GRYILRIEDT 143


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YNVQIED 9
YN+++ED
Sbjct: 501 YNLEVED 507


>sp|Y2225_ARCFU|UNCHARACTERIZED protein AF_2225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GPYNVQIED 9
GPY +I+D
Sbjct: 154 GPYIAEIDD 162




50|SequenceR|255|246|MLEFMGPYNV

>sp|XACG_HALVD|XYLOSE/ARABINOSE-BINDING protein XacG|Haloferax volcanii (strain ATCC 29605

Query: 4 FMGPYNV 10
FMGP+NV
Sbjct: 440 FMGPFNV 446


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 2 LEFMGPYNV 10
LE GP+NV
Sbjct: 800 LEIKGPFNV 808


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 2 LEFMGPYNV 10
LE GP+NV
Sbjct: 814 LEIKGPFNV 822


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 MLEFMGPYNV 10
+LE GP+N+
Sbjct: 820 VLEIKGPFNI 829


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MLEFMGPY 8
M+EF+ PY
Sbjct: 193 MMEFIRPY 200


>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MLEFMGPY 8
+LEFMG Y
Sbjct: 56 VLEFMGAY 63


>sp|COFC_META3|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 MLEFMGPYNV 10
+LEF+ PY V
Sbjct: 58 ILEFLKPYAV 67


>sp|IXTPA_PICTO|DITP/XTP pyrophosphatase|Picrophilus torridus (strain ATCC 700027

Query: 3 EFMGPYNV 10
EF+G YN+
Sbjct: 16 EFLGNYNI 23


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MLEFMGPYNV 10
+LEF G Y+V
Sbjct: 320 VLEFKGRYDV 329


>sp|DNAG_METS5|DNA primase DnaG|Metallosphaera sedula (strain ATCC 51363

Query: 2 LEFMGPYN 9
+E +GPYN
Sbjct: 89 VEKVGPYN 96


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LEFMGPYNV 10
LEF G Y+V
Sbjct: 321 LEFKGRYDV 329


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LEFMGPYNV 10
+E GP+N+
Sbjct: 80 IELSGPHNI 88


>sp|Y941_METJA|TPR repeat-containing protein MJ0941|Methanocaldococcus jannaschii

Query: 2 LEFMGPYN 9
LEF+G Y+
Sbjct: 141 LEFLGEYD 148




51|SequenceR|260|251|GQLDEMLEFM

>sp|Y292_ARCFU|UNCHARACTERIZED protein AF_0292|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GQLDEML 7
GQLD+ML
Sbjct: 5 GQLDQML 11


>sp|MOAA_ARCFU|PROBABLE GTP 3',8-cyclase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QLDEMLEF 9
++DE+LEF
Sbjct: 163 EVDELLEF 170


>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 QLDEMLEFM 10
++DE+ EFM
Sbjct: 378 EMDEIAEFM 386


>sp|GATD_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Sulfolobus acidocaldarius (strain ATCC

Query: 4 DEMLEFM 10
DE++EFM
Sbjct: 119 DEIIEFM 125


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 GQLDEMLE 8
GQ+DE+L+
Sbjct: 395 GQVDEILD 402


>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain Fusaro

Query: 1 GQLDEMLEFM 10
G+L +LEFM
Sbjct: 406 GKLKAVLEFM 415




52|SequenceR|265|256|NSEGMGQLDE

>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 1 NSEGMGQLD 9
N GMGQ D
Sbjct: 444 NIHGMGQFD 452


>sp|PRIS_METAR|DNA primase small subunit PriS|Methanocella arvoryzae (strain DSM 22066

Query: 2 SEGMGQLDE 10
SEG+G+L E
Sbjct: 376 SEGVGRLPE 384




53|SequenceR|270|261|RNWACNSEGM

>sp|PYRK_ARCFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Archaeoglobus fulgidus

Query: 3 WACNSEGM 10
+ C SEGM
Sbjct: 168 YVCGSEGM 175


>sp|TDXH_IGNH4|PEROXIREDOXIN hospitalis (strain KIN4/I /

Query: 2 NWACN 6
NW CN
Sbjct: 172 NWPCN 176


>sp|PYRK_METKA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanopyrus kandleri

Query: 3 WACNSEGM 10
+AC EGM
Sbjct: 185 YACGPEGM 192


>sp|MDH_PYRAB|MALATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 3 WACNSEG 9
WA NS+G
Sbjct: 209 WAINSKG 215


>sp|Y1627_METJA|UPF0179 protein MJ1627|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CNSEGM 10
CNSEG+
Sbjct: 111 CNSEGI 116


>sp|BACH_HALAR|CRUXHALORHODOPSIN-1 argentinensis

Query: 3 WACNSEGM 10
WA SEG+
Sbjct: 98 WALGSEGV 105


>sp|Y1037_META3|UPF0179 protein Maeo_1037|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 CNSEGM 10
C+SEGM
Sbjct: 110 CHSEGM 115


>sp|BACH_HALMA|HALORHODOPSIN marismortui (strain ATCC 43049

Query: 3 WACNSEGM 10
WA SEG+
Sbjct: 214 WALGSEGV 221


>sp|BACH_HALHS|HALORHODOPSIN halobium (strain shark)

Query: 3 WACNSEGM 10
WA SEG+
Sbjct: 214 WALGSEGV 221


>sp|BACH_HALHP|HALORHODOPSIN halobium (strain port)

Query: 3 WACNSEGM 10
WA SEG+
Sbjct: 214 WALGSEGV 221


>sp|BACH_HALVA|CRUXHALORHODOPSIN-3 vallismortis (Halobacterium vallismortis)

Query: 3 WACNSEGM 10
WA SEG+
Sbjct: 214 WALGSEGV 221




54|SequenceR|275|266|HLLAKRNWAC

>sp|DTDA_METAC|D-AMINOACYL-TRNA deacylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HLLAKRNW 8
HLLA R W
Sbjct: 31 HLLALREW 38


>sp|AROC_THEKO|CHORISMATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HLLAKRNW 8
HLL +R W
Sbjct: 343 HLLRRRAW 350


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HLLAKRNW 8
HL+ ++NW
Sbjct: 1010 HLIDEKNW 1017


>sp|DTDA_METBU|D-AMINOACYL-TRNA deacylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 HLLAKRNW 8
HLL R+W
Sbjct: 31 HLLKLRDW 38


>sp|Y1554_METJA|UNCHARACTERIZED protein MJ1554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HLLAKRNW 8
H+L + NW
Sbjct: 596 HILDENNW 603




55|SequenceR|280|271|LMTDRHLLAK

>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 2 MTDRHLLA 9
+TD HLL+
Sbjct: 508 LTDEHLLS 515




56|SequenceR|285|276|VAAAALMTDR

>sp|RTCA_PYRNV|RNA 3'-terminal phosphate cyclase|Pyrobaculum neutrophilum (strain

Query: 1 VAAAALMTD 9
V+AAAL+TD
Sbjct: 53 VSAAALLTD 61


>sp|RTCA_PYRIL|RNA 3'-terminal phosphate cyclase|Pyrobaculum islandicum (strain DSM

Query: 1 VAAAALMTD 9
V+AAAL+TD
Sbjct: 53 VSAAALLTD 61


>sp|RTCA_PYRCJ|RNA 3'-terminal phosphate cyclase|Pyrobaculum calidifontis (strain

Query: 1 VAAAALMTD 9
V AAAL+TD
Sbjct: 52 VNAAALLTD 60




57|SequenceR|290|281|YMERYVAAAA

>sp|RS2_CALMQ|SMALL ribosomal subunit protein uS2|Caldivirga maquilingensis (strain

Query: 2 MERYVAAA 9
+ERY+AAA
Sbjct: 18 VERYMAAA 25


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 YMERYVA 7
Y+ERYV+
Sbjct: 77 YVERYVS 83


>sp|TSR3_VULDI|16S rRNA aminocarboxypropyltransferase|Vulcanisaeta distributa (strain

Query: 1 YMERYVAA 8
Y+ERY A
Sbjct: 149 YLERYAAG 156


>sp|RSMA_METBF|PROBABLE ribosomal RNA small subunit|Methanosarcina barkeri (strain Fusaro

Query: 1 YMERYVAAA 9
Y++R VAAA
Sbjct: 36 YLDRIVAAA 44


>sp|RSMA_METMA|PROBABLE ribosomal RNA small subunit|Methanosarcina mazei (strain ATCC

Query: 1 YMERYVAAA 9
Y++R VAAA
Sbjct: 26 YLDRIVAAA 34




58|SequenceR|295|286|GDENRYMERY

>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 1 GDENRYMERY 10
GD+ R+M+ Y
Sbjct: 502 GDKERFMKEY 511


>sp|IF2P_META3|PROBABLE translation initiation factor IF-2|Methanococcus aeolicus (strain

Query: 1 GDENRYMERY 10
GDE ERY
Sbjct: 574 GDEREAFERY 583


>sp|Y755_METJA|UNCHARACTERIZED protein MJ0755|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DENRYMERY 10
++NRY E Y
Sbjct: 258 EQNRYQEAY 266


>sp|Y133_THEAC|PUTATIVE quercetin 2,3-dioxygenase Ta0133|Thermoplasma acidophilum (strain

Query: 1 GDENRYMER 9
G+EN+Y ER
Sbjct: 71 GEENKYRER 79


>sp|GGR_META3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 ENRYMERY 10
ENR+ E+Y
Sbjct: 324 ENRWKEKY 331


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GDENRYM 7
G+ENRY+
Sbjct: 215 GEENRYL 221


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GDENRYM 7
G+ENRY+
Sbjct: 215 GEENRYL 221


>sp|DPHB_THEKO|DIPHTHINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GDENRYM 7
D+NRYM
Sbjct: 170 ADQNRYM 176


>sp|Y2332_ARCFU|UNCHARACTERIZED protein AF_2332|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DENRYMERY 10
DE RY E Y
Sbjct: 100 DERRYAEFY 108


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 3 ENRYMERY 10
+N+Y+E+Y
Sbjct: 444 DNKYIEKY 451


>sp|DPHB_THEON|DIPHTHINE synthase|Thermococcus onnurineus (strain NA1)

Query: 1 GDENRYM 7
D+NRYM
Sbjct: 170 ADQNRYM 176


>sp|RS2_METS5|SMALL ribosomal subunit protein uS2|Metallosphaera sedula (strain ATCC

Query: 5 RYMERY 10
RYMER+
Sbjct: 50 RYMERF 55


>sp|RS2_SULAC|SMALL ribosomal subunit protein uS2|Sulfolobus acidocaldarius (strain

Query: 5 RYMERY 10
RYMER+
Sbjct: 50 RYMERF 55


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GDENRYMERY 10
GD RY++ Y
Sbjct: 496 GDPERYIKTY 505


>sp|RL13_SACS2|LARGE ribosomal subunit protein uL13|Saccharolobus solfataricus (strain

Query: 1 GDENRYMERY 10
G++NR +E Y
Sbjct: 48 GEKNRVIESY 57


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GDENRYMERY 10
GD RY++ Y
Sbjct: 496 GDPERYVKTY 505


>sp|PYCA_METTH|PYRUVATE carboxylase subunit A|Methanothermobacter thermautotrophicus

Query: 1 GDENRYMERY 10
GD Y+E+Y
Sbjct: 193 GDPTVYIEKY 202


>sp|SYW_THESM|TRYPTOPHAN--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 DENRYMERY 10
DE + +ERY
Sbjct: 313 DEKKLLERY 321


>sp|RL10E_METTH|LARGE ribosomal subunit protein uL16|Methanothermobacter

Query: 4 NRYMER 9
NRYM+R
Sbjct: 58 NRYMQR 63


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 2 DENRYMERY 10
DE R ERY
Sbjct: 633 DEERIAERY 641


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 2 DENRYMERY 10
DE R ERY
Sbjct: 633 DEERIAERY 641


>sp|DCDB_NANEQ|DCTP deaminase, dUMP-forming|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 DENRYMERY 10
DEN+ +E+Y
Sbjct: 66 DENKIIEKY 74


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GDENRYM 7
G ENRY+
Sbjct: 212 GSENRYL 218




59|SequenceR|300|291|TAPVSGDENR

>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PVSGDE 8
PVSGDE
Sbjct: 299 PVSGDE 304


>sp|HTR2_HALMA|SENSORY rhodopsin II transducer|Haloarcula marismortui (strain ATCC 43049

Query: 2 APVSGDENR 10
+PV GDE+R
Sbjct: 177 SPVPGDEDR 185


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TAPVSGDE 8
T PV+GDE
Sbjct: 289 TNPVTGDE 296


>sp|MCH_HALSA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 2 APVSGDEN 9
APV+GDE
Sbjct: 211 APVAGDEQ 218


>sp|MCH_HALS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 2 APVSGDEN 9
APV+GDE
Sbjct: 211 APVAGDEQ 218


>sp|UVRC_METMP|UVRABC system protein C|Methanococcus maripaludis (strain DSM 14266

Query: 1 TAPVSGD 7
TAP SGD
Sbjct: 163 TAPCSGD 169


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TAPVSGDE 8
T P++GDE
Sbjct: 289 TNPITGDE 296


>sp|Y1458_METJA|UNCHARACTERIZED protein MJ1458|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TAPVSGDEN 9
T P+ G+EN
Sbjct: 120 TLPIVGEEN 128


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TAPVSGDEN 9
T PV DEN
Sbjct: 111 TTPVGKDEN 119


>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TAPVSGDEN 9
T PV DEN
Sbjct: 111 TTPVGKDEN 119


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TAPVSGDEN 9
T PV DEN
Sbjct: 111 TTPVGKDEN 119


>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 APVSGDE 8
APVS DE
Sbjct: 170 APVSADE 176


>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain ATCC

Query: 4 VSGDENR 10
+SGD NR
Sbjct: 374 ISGDNNR 380


>sp|G1PDH_METAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocella arvoryzae (strain DSM 22066

Query: 1 TAPVSGDENR 10
+AP SG E++
Sbjct: 237 SAPASGSEHK 246




60|SequenceR|305|296|YYIQYTAPVS

>sp|HAH4_HALMT|HALOCIN-H4 mediterranei (strain ATCC 33500

Query: 1 YYIQYTAP 8
YY+ +TAP
Sbjct: 271 YYVTFTAP 278


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 1 YYIQYT 6
YY+QYT
Sbjct: 316 YYLQYT 321


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 3 IQYTAPVS 10
+QYT P+S
Sbjct: 283 LQYTHPIS 290


>sp|DPHB_PYRAE|DIPHTHINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YYIQYTAPV 9
+Y YTAP+
Sbjct: 29 FYEDYTAPL 37


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 1 YYIQYTAP 8
YYI+ T P
Sbjct: 462 YYIEVTKP 469


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 2 YIQYTAPVS 10
YI+YTA V+
Sbjct: 204 YIKYTAVVN 212


>sp|FLA1_THEVO|FLAGELLIN B1|Thermoplasma volcanium (strain ATCC 51530

Query: 3 IQYTAPVS 10
IQ+TAP S
Sbjct: 231 IQFTAPES 238


>sp|CARA_SULAC|CARBAMOYL phosphate synthase small chain|Sulfolobus acidocaldarius (strain

Query: 2 YIQYTAP 8
+IQYT+P
Sbjct: 166 FIQYTSP 172


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 YYIQY 5
YYIQY
Sbjct: 106 YYIQY 110


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YYIQY 5
YYIQY
Sbjct: 106 YYIQY 110


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YYIQY 5
YYIQY
Sbjct: 106 YYIQY 110




61|SequenceR|310|301|KWGIMYYIQY

>sp|FTSZ2_PYRFU|CELL division protein FtsZ 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KWGIMYYIQY 10
KWGI ++Y
Sbjct: 178 KWGIQRLLEY 187


>sp|G3P_METKA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 3 GIMYYIQ 9
G++YY+Q
Sbjct: 299 GVLYYMQ 305


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WGIMYYIQY 10
WG YI Y
Sbjct: 488 WGFDSYISY 496


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 6 YYIQY 10
YYIQY
Sbjct: 106 YYIQY 110


>sp|NADE_STAMF|NH(3)-DEPENDENT NAD(+) synthetase|Staphylothermus marinus (strain ATCC 43588

Query: 1 KWGIMYYI 8
K+GI YY+
Sbjct: 87 KYGIKYYV 94


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 6 YYIQY 10
YYIQY
Sbjct: 106 YYIQY 110


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 6 YYIQY 10
YYIQY
Sbjct: 106 YYIQY 110


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 6 YYIQY 10
YYIQY
Sbjct: 106 YYIQY 110




62|SequenceR|315|306|QSEHYKWGIM

>sp|Y870_ARCFU|UNCHARACTERIZED protein AF_0870|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 HYKWGI 9
H+KWGI
Sbjct: 4 HHKWGI 9


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 2 SEHYKWG 8
S HY WG
Sbjct: 134 SSHYDWG 140


>sp|BUD32_PYRAB|KEOPS complex subunit Bud32|Pyrococcus abyssi (strain GE5 /

Query: 1 QSEHYKW 7
+S HYKW
Sbjct: 169 ESTHYKW 175


>sp|RS9_HALMA|SMALL ribosomal subunit protein uS9|Haloarcula marismortui (strain ATCC

Query: 1 QSEHYKWG 8
QSE KWG
Sbjct: 112 QSEPKKWG 119


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 YKWGI 9
YKWG+
Sbjct: 357 YKWGV 361


>sp|RPO3_METST|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosphaera stadtmanae (strain ATCC

Query: 2 SEHYKW 7
SEH KW
Sbjct: 150 SEHAKW 155


>sp|PYRC_METJA|DIHYDROOROTASE jannaschii (strain ATCC 43067

Query: 4 HYKWG 8
H++WG
Sbjct: 58 HFRWG 62


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 1 QSEHYKWG 8
+SE YKW
Sbjct: 324 KSEIYKWA 331


>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 EHYKW 7
EH+KW
Sbjct: 16 EHHKW 20


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EHYKWGI 9
EH+KW +
Sbjct: 70 EHFKWDV 76


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 EHYKW 7
EH+KW
Sbjct: 19 EHHKW 23


>sp|HMGCS_METTL|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermococcus thermolithotrophicus

Query: 2 SEHYKWGIM 10
+E YK+G++
Sbjct: 256 NEQYKYGLL 264


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EHYKW 7
EHY W
Sbjct: 371 EHYSW 375


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 SEHYKW 7
+ HYKW
Sbjct: 601 NNHYKW 606


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 3 EHYKWGI 9
E YKW +
Sbjct: 106 EEYKWAL 112




63|SequenceR|320|311|EAPRAQSEHY

>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EAPRAQSEHY 10
EAPR + HY
Sbjct: 317 EAPRGELVHY 326


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 EAPRAQSEH 9
E+PR + EH
Sbjct: 345 ESPRVEREH 353


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 PRAQSEHY 10
PRA SE Y
Sbjct: 68 PRALSEQY 75


>sp|PHR_METTM|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 EAPRAQSEHY 10
E P A S HY
Sbjct: 61 EFPNANSRHY 70


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EAPRAQSEHY 10
E RAQSE Y
Sbjct: 234 ENERAQSESY 243




64|SequenceR|325|316|TASGREAPRA

>sp|PIMT_METMP|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TASGREAPRA 10
TASG + P+A
Sbjct: 152 TASGPDVPKA 161


>sp|PIMT_METM7|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 TASGREAPRA 10
TASG + P+A
Sbjct: 152 TASGPDVPKA 161


>sp|RL24_NATPD|LARGE ribosomal subunit protein uL24|Natronomonas pharaonis (strain

Query: 1 TASGREAPR 9
TA G E PR
Sbjct: 82 TADGEEVPR 90


>sp|PIMT_METM6|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 TASGREAPRA 10
TASG P+A
Sbjct: 152 TASGPNVPKA 161


>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 TASGREAPRA 10
T RE+PRA
Sbjct: 347 TVISRESPRA 356




65|SequenceR|330|321|EGFSVTASGR

>sp|3MGH_AERPE|PUTATIVE 3-methyladenine DNA glycosylase|Aeropyrum pernix (strain ATCC

Query: 1 EGFSVTASGR 10
EGF V SGR
Sbjct: 152 EGFRVACSGR 161


>sp|CIMA_METMA|PUTATIVE (R)-citramalate synthase CimA|Methanosarcina mazei (strain ATCC

Query: 1 EGFSVTASG 9
EG S+TASG
Sbjct: 451 EGKSITASG 459


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EGFSVTASGR 10
EG SV +GR
Sbjct: 71 EGLSVRTAGR 80


>sp|6PGD_HALVD|6-PHOSPHOGLUCONATE dehydrogenase, NAD(+)-dependent, decarboxylating|Haloferax volcanii

Query: 1 EGFSVTASGR 10
EGF + A GR
Sbjct: 185 EGFELLAEGR 194


>sp|RIB7_ARCFU|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EGFSVTA 7
EGF+VTA
Sbjct: 209 EGFAVTA 215




66|SequenceR|335|326|NIKGLEGFSV

>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 1 NIKGLEGFS 9
NIK +EGFS
Sbjct: 569 NIKTIEGFS 577


>sp|Y1999_ARCFU|UNCHARACTERIZED protein AF_1999|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NIKGLEGFSV 10
N+K +EGF V
Sbjct: 88 NLKDIEGFEV 97


>sp|PYRH_PICTO|URIDYLATE kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 NIKGLEGFSV 10
NIKG +GF +
Sbjct: 32 NIKGYDGFGI 41


>sp|PYRI_METS5|ASPARTATE carbamoyltransferase regulatory chain|Metallosphaera sedula

Query: 2 IKGLEGFSV 10
IKG+EG+ +
Sbjct: 36 IKGIEGYRI 44


>sp|PCNA1_SACS2|DNA polymerase sliding clamp 1|Saccharolobus solfataricus (strain ATCC

Query: 2 IKGLEGFS 9
+KGL GFS
Sbjct: 209 VKGLRGFS 216


>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 2 IKGLEGF 8
IKGL GF
Sbjct: 119 IKGLHGF 125


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IKGLEGFS 9
+KG++GFS
Sbjct: 276 LKGIKGFS 283


>sp|ACYP_THEKO|ACYLPHOSPHATASE kodakarensis (strain ATCC BAA-918

Query: 3 KGLEGFSV 10
+GLEGF V
Sbjct: 82 EGLEGFKV 89


>sp|PIMT_METMA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IKGLEGFSV 10
++GLEGF +
Sbjct: 39 VEGLEGFVI 47


>sp|PYRI_SULAC|ASPARTATE carbamoyltransferase regulatory chain|Sulfolobus acidocaldarius

Query: 2 IKGLEGFSV 10
IKG EGF +
Sbjct: 38 IKGHEGFRI 46


>sp|Y1724_ARCFU|UNCHARACTERIZED protein AF_1724|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IKGLEGFSV 10
IKG +GF++
Sbjct: 265 IKGAKGFAI 273


>sp|Y1571_AERPE|UNCHARACTERIZED protein APE_1571.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 IKGLEGFSV 10
+KG EGF +
Sbjct: 54 VKGHEGFRI 62


>sp|Y1389_METJA|UNCHARACTERIZED protein MJ1389|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NIKGLEGFSV 10
N+K +EGF +
Sbjct: 22 NLKNVEGFVI 31


>sp|Y1031_METJA|UNCHARACTERIZED transporter MJ1031|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NIKGLE 6
NIKGLE
Sbjct: 249 NIKGLE 254


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IKGLEGF 8
I+GL+GF
Sbjct: 121 IRGLDGF 127


>sp|GATE_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanocaldococcus jannaschii (strain

Query: 2 IKGLEGFS 9
IKGL+G S
Sbjct: 565 IKGLKGLS 572


>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 NIKGLEG 7
NIKGLE
Sbjct: 136 NIKGLEN 142




67|SequenceR|345|331|QSKKGPPMLNNIKGL

>sp|NFI_METKA|ENDONUCLEASE V|Methanopyrus kandleri (strain AV19 /

Query: 3 KKGPPMLNNIKGL 15
++GPP L ++GL
Sbjct: 85 REGPPALEALEGL 97


>sp|ILVE_ARCFU|PUTATIVE branched-chain-amino-acid aminotransferase|Archaeoglobus fulgidus

Query: 6 PPMLNNIKGL 15
PP +NN++G+
Sbjct: 200 PPTINNLRGI 209


>sp|PGK2_METJA|2-PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KKGPPMLNNIK 13
KKG P++ NIK
Sbjct: 264 KKGIPVVENIK 274


>sp|AMPD_AERPE|ANHYDROMEVALONATE phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 5 GPPMLNNIKGL 15
GPP+L I+G+
Sbjct: 39 GPPLLARIEGV 49


>sp|NFI_ARCFU|ENDONUCLEASE V|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KKGPPMLNNIKGL 15
++G P +N +KGL
Sbjct: 82 REGEPAVNAVKGL 94


>sp|CHEB1_METHJ|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanospirillum

Query: 2 SKKGPPMLNNI 12
S GPPML+ I
Sbjct: 153 SAGGPPMLDTI 163


>sp|TF2B_METTL|TRANSCRIPTION initiation factor IIB|Methanothermococcus thermolithotrophicus

Query: 1 QSKKGPPMLNNI--KGL 15
+S+ GPPM I KGL
Sbjct: 91 RSRVGPPMTYTIHDKGL 107


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 6 PPMLNNIKGL 15
PP L +++GL
Sbjct: 273 PPNLTDVRGL 282


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 6 PPMLNNIKGL 15
PP L +++GL
Sbjct: 273 PPNLTDVRGL 282


>sp|RS6E_NITMS|SMALL ribosomal subunit protein eS6|Nitrosopumilus maritimus (strain

Query: 2 SKKGPPMLNNIKG 14
K G PM N+I G
Sbjct: 55 DKSGVPMRNDIHG 67


>sp|ACYP_SULAC|ACYLPHOSPHATASE acidocaldarius (strain ATCC 33909

Query: 1 QSKKGPPM 8
Q K+GPP+
Sbjct: 62 QIKRGPPL 69


>sp|HYD2D_PYRFU|SULFHYDROGENASE 2 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 4 KGPPMLNNIKGL 15
+GP + NN+ G+
Sbjct: 203 RGPSLDNNVPGM 214


>sp|XACJ_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacJ|Haloferax volcanii (strain ATCC

Query: 5 GPPMLNNIKG 14
G PM+N ++G
Sbjct: 236 GEPMINLVRG 245


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 4 KGPPMLNNIKG 14
+G P+++NI G
Sbjct: 257 QGGPLMHNIAG 267


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 4 KGPPMLNNIKG 14
+G P+++NI G
Sbjct: 257 QGGPLMHNIAG 267


>sp|GLYA_HALLT|SERINE hydroxymethyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 4 KGPPMLNNIKG 14
+G P+++NI G
Sbjct: 257 QGGPLMHNIAG 267


>sp|TDXH_THEVO|PEROXIREDOXIN volcanium (strain ATCC 51530

Query: 2 SKKGPPMLNNIKG 14
+ KGP L+N +G
Sbjct: 16 TSKGPITLSNYRG 28


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 9 LNNIKGL 15
LNNIKG+
Sbjct: 103 LNNIKGI 109


>sp|RL13_SACS2|LARGE ribosomal subunit protein uL13|Saccharolobus solfataricus (strain

Query: 1 QSKKGPPMLNNIK 13
+S KG ML N+K
Sbjct: 94 KSSKGRRMLKNVK 106


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 4 KGPPMLNNIKGL 15
KGP L +IKG+
Sbjct: 618 KGPSDLLSIKGI 629


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 7 PMLNNIKG 14
P L+N+KG
Sbjct: 202 PFLDNLKG 209


>sp|ARGC_METTP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 KGPPMLNNIK 13
+G PML N++
Sbjct: 274 EGVPMLGNVR 283


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 SKKGPPMLNNI 12
+KKGP L+++
Sbjct: 203 AKKGPTALSDV 213


>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 10 NNIKGL 15
NNIKGL
Sbjct: 116 NNIKGL 121


>sp|PYRDB_ARCFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Archaeoglobus fulgidus (strain

Query: 5 GPPMLNNIKG 14
G P+L+N+ G
Sbjct: 201 GKPVLSNLSG 210




68|SequenceR|345|336|QSKKGPPMLN

>sp|ACYP_SULAC|ACYLPHOSPHATASE acidocaldarius (strain ATCC 33909

Query: 1 QSKKGPPM 8
Q K+GPP+
Sbjct: 62 QIKRGPPL 69


>sp|TF2B_METTL|TRANSCRIPTION initiation factor IIB|Methanothermococcus thermolithotrophicus

Query: 1 QSKKGPPM 8
+S+ GPPM
Sbjct: 91 RSRVGPPM 98


>sp|CHEB1_METHJ|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanospirillum

Query: 2 SKKGPPMLN 10
S GPPML+
Sbjct: 153 SAGGPPMLD 161


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 2 SKKGPPMLN 10
SK+GP +LN
Sbjct: 698 SKEGPFILN 706




THE END