NDUF4_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|RIGRIVLAGM

>sp|MPTE_METTH|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 3 GRIVLAGM 10
GRIVLAGM
Sbjct: 175 GRIVLAGM 182


>sp|PELO_PYRCJ|PROTEIN pelota homolog|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RIGRIVLAG 9
+I R+VLAG
Sbjct: 190 KIDRVVLAG 198




2|SequenceR|15|6|ELNFNRIGRI

>sp|Y070_ARCFU|UNCHARACTERIZED protein AF_0070|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELNFNRIGRI 10
ELNF RI +I
Sbjct: 52 ELNFERIDQI 61


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 1 ELNFNRIGRI 10
++ FN +GRI
Sbjct: 185 QIAFNEVGRI 194


>sp|DHYS_THEVO|PROBABLE deoxyhypusine synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ELNFNRIGRI 10
E+N NR+G +
Sbjct: 118 EININRLGNV 127


>sp|PTR2_METJA|HTH-TYPE transcriptional regulator Ptr2|Methanocaldococcus jannaschii

Query: 1 ELNFNRIGRI 10
+L FN+IG+I
Sbjct: 115 DLIFNKIGKI 124


>sp|AROC_METS5|CHORISMATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 ELNFNRIGRI 10
EL+F R GR+
Sbjct: 44 ELSFRRPGRL 53


>sp|DPHB_THEKO|DIPHTHINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ELNFNRI 7
ELNF RI
Sbjct: 64 ELNFERI 70


>sp|DPHB_PYRAB|DIPHTHINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 ELNFNRI 7
ELNF RI
Sbjct: 64 ELNFERI 70


>sp|AROC_SACS2|CHORISMATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ELNFNRIGRI 10
EL F R GR+
Sbjct: 44 ELEFRRPGRL 53


>sp|AROC_SACI3|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 ELNFNRIGRI 10
EL F R GR+
Sbjct: 44 ELEFRRPGRL 53


>sp|AROC_SACI7|CHORISMATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 ELNFNRIGRI 10
EL F R GR+
Sbjct: 44 ELEFRRPGRL 53


>sp|AROC_SACI6|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ELNFNRIGRI 10
EL F R GR+
Sbjct: 44 ELEFRRPGRL 53


>sp|AROC_SACI4|CHORISMATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ELNFNRIGRI 10
EL F R GR+
Sbjct: 44 ELEFRRPGRL 53


>sp|AROC_SACI2|CHORISMATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 ELNFNRIGRI 10
EL F R GR+
Sbjct: 44 ELEFRRPGRL 53


>sp|DNAG_STAMF|DNA primase DnaG|Staphylothermus marinus (strain ATCC 43588

Query: 5 NRIGRI 10
NRIGRI
Sbjct: 46 NRIGRI 51


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ELNFNRIGR 9
ELN+ +GR
Sbjct: 368 ELNYKLVGR 376


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 ELNFNRIGR 9
ELN+ +GR
Sbjct: 368 ELNYKLVGR 376


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 ELNFNRIGR 9
ELN+ +GR
Sbjct: 368 ELNYKLVGR 376


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 ELNFNRIGR 9
ELN+ +GR
Sbjct: 368 ELNYKLVGR 376




3|SequenceR|20|11|REARNELNFN

>sp|PGP_PYRHO|PHOSPHOGLYCOLATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 REARNELNFN 10
RE NELN N
Sbjct: 126 REIINELNLN 135


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 2 EARNELNF 9
+ARNEL F
Sbjct: 757 DARNELQF 764


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 EARNELNF 9
EARN +NF
Sbjct: 530 EARNMVNF 537


>sp|ATGT_NANEQ|TRNA-GUANINE(15) transglycosylase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 RNELNF 9
RNE+NF
Sbjct: 297 RNEINF 302




4|SequenceR|25|16|MKSIEREARN

>sp|LEMA_METJA|PROTEIN LemA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MKSIEREARN 10
+++IERE+RN
Sbjct: 93 IQNIERESRN 102


>sp|TRUA_NANEQ|TRNA pseudouridine synthase A|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 SIEREARN 10
+IEREA+N
Sbjct: 123 TIEREAKN 130


>sp|CCA_PYRFU|CCA-ADDING enzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MKSIEREA 8
MK+I+REA
Sbjct: 224 MKTIKREA 231




5|SequenceR|30|21|AVSPKMKSIE

>sp|IF2A_PYRAE|TRANSLATION initiation factor 2 subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 AVSPKMKSIE 10
+V+PKM+ +E
Sbjct: 69 SVNPKMRVVE 78




6|SequenceR|35|26|SPHRPAVSPK

>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 HRPAVSP 9
HRPAV P
Sbjct: 508 HRPAVDP 514


>sp|CBID_METM5|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 PHRPAVSPK 10
P +PA++PK
Sbjct: 123 PGKPAINPK 131


>sp|RL22_THEAC|LARGE ribosomal subunit protein uL22|Thermoplasma acidophilum (strain

Query: 3 HRPAVSP 9
HRP V P
Sbjct: 70 HRPGVGP 76


>sp|RADA_CENSY|DNA repair and recombination protein|Cenarchaeum symbiosum (strain A)

Query: 1 SPHRPA 6
SPH PA
Sbjct: 301 SPHHPA 306


>sp|COMDE_METAC|SULFOPYRUVATE decarboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PHRPAVSPK 10
PH VSPK
Sbjct: 153 PHIALVSPK 161




7|SequenceR|40|31|LLSNTSPHRP

>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 TSPHRP 10
T PHRP
Sbjct: 492 TDPHRP 497


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 TSPHRP 10
T PHRP
Sbjct: 489 TDPHRP 494


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LLSNTSPHRP 10
L N+S HRP
Sbjct: 368 LFDNSSLHRP 377


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 TSPHRP 10
T PHRP
Sbjct: 245 TDPHRP 250


>sp|HIS8_NATPD|HISTIDINOL-PHOSPHATE aminotransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 TSPHRP 10
TSPH P
Sbjct: 161 TSPHNP 166


>sp|APGM_PYRAE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LSNTSPHR 9
+S+T PHR
Sbjct: 163 VSDTDPHR 170


>sp|HIS8_HALMA|HISTIDINOL-PHOSPHATE aminotransferase|Haloarcula marismortui (strain ATCC 43049

Query: 5 TSPHRP 10
TSPH P
Sbjct: 161 TSPHNP 166


>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 LSNTSPHRP 10
+S T+P RP
Sbjct: 115 MSKTAPFRP 123


>sp|HIS8_HALLT|HISTIDINOL-PHOSPHATE aminotransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 TSPHRP 10
TSPH P
Sbjct: 161 TSPHNP 166


>sp|HIS8_HALWD|HISTIDINOL-PHOSPHATE aminotransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LLSNTSPHRP 10
LL T+PH P
Sbjct: 157 LLYVTTPHNP 166




8|SequenceR|45|36|SIQERLLSNT

>sp|CSG_HALSA|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 700922

Query: 2 IQERLLSNT 10
I++R+LSNT
Sbjct: 654 IRDRILSNT 662


>sp|CSG_HALS3|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 29341

Query: 2 IQERLLSNT 10
I++R+LSNT
Sbjct: 654 IRDRILSNT 662


>sp|YNH2_METBA|UNCHARACTERIZED protein in nifH2 5'region|Methanosarcina barkeri

Query: 1 SIQERLLSNT 10
S + RLLSNT
Sbjct: 176 SRETRLLSNT 185


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IQERLLSNT 10
I+E L+SNT
Sbjct: 481 IEEALISNT 489




9|SequenceR|50|41|VEPYLSIQER

>sp|TOP6A_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EPYLSIQER 10
+PYLS QER
Sbjct: 307 KPYLSEQER 315


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 2 EPYLSIQE 9
EPYLS+ E
Sbjct: 331 EPYLSVNE 338


>sp|DEOC_PYRAR|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 EPYLSIQER 10
EPYL+ +ER
Sbjct: 122 EPYLTDEER 130


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 1 VEPYLSIQER 10
V P+LS +ER
Sbjct: 270 VRPHLSTEER 279


>sp|DEOC_PYRIL|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 EPYLSIQER 10
EPYL+ +ER
Sbjct: 122 EPYLTDEER 130


>sp|DEOC_PYRNV|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 EPYLSIQER 10
EPYL+ +ER
Sbjct: 122 EPYLTDEER 130


>sp|DHYS_METTH|PROBABLE deoxyhypusine synthase|Methanothermobacter thermautotrophicus

Query: 2 EPYLSIQE 9
+P++SIQE
Sbjct: 148 KPHISIQE 155


>sp|TOP6A_HYPBU|TYPE 2 DNA topoisomerase 6|Hyperthermus butylicus (strain DSM 5456

Query: 2 EPYLSIQER 10
+PYL+ QER
Sbjct: 307 KPYLTEQER 315


>sp|HEM1_METTH|GLUTAMYL-TRNA reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VEPYLSIQE 9
+E YLS+QE
Sbjct: 52 IEYYLSVQE 60


>sp|Y415_ARCFU|UNCHARACTERIZED protein AF_0415|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PYLSIQE 9
PYLSI E
Sbjct: 18 PYLSIDE 24


>sp|Y994_METTH|PUTATIVE aminohydrolase MTH_994|Methanothermobacter thermautotrophicus

Query: 2 EPYLSIQER 10
+PYLSI R
Sbjct: 358 DPYLSIINR 366


>sp|DEOC_PYRAE|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EPYLSIQER 10
EPYL +ER
Sbjct: 122 EPYLRDEER 130


>sp|Y701_ARCFU|UNCHARACTERIZED protein AF_0701|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VEPYLSIQER 10
VEPYL ER
Sbjct: 79 VEPYLEEVER 88


>sp|PORB_METTH|PYRUVATE synthase subunit PorB|Methanothermobacter thermautotrophicus

Query: 1 VEPYLSIQER 10
VE YL+ Q+R
Sbjct: 254 VEEYLNAQKR 263




10|SequenceR|55|46|AIEGKVEPYL

>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 IEGKVEPYL 10
+EGKVEP L
Sbjct: 27 LEGKVEPVL 35


>sp|AATF_HALLT|A-TYPE ATP synthase subunit F|Halorubrum lacusprofundi (strain ATCC

Query: 1 AIEGKVEPYL 10
A+EG +EP L
Sbjct: 70 AVEGSIEPVL 79


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 2 IEGKVEPYL 10
+EGK+ PYL
Sbjct: 660 LEGKLTPYL 668


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 AIEGKVEPY 9
A++GK++PY
Sbjct: 30 ALQGKLDPY 38


>sp|RL24E_METVS|LARGE ribosomal subunit protein eL24|Methanococcus vannielii (strain

Query: 3 EGKVEP 8
EGK+EP
Sbjct: 10 EGKIEP 15


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 2 IEGKVEPYL 10
EGK+ PYL
Sbjct: 49 FEGKLTPYL 57


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 AIEGKVEPY 9
A+EGK+ PY
Sbjct: 86 ALEGKLIPY 94


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 1 AIEGKVEPYL 10
A+EGK +P L
Sbjct: 565 ALEGKTDPRL 574


>sp|HISX_PYRFU|HISTIDINOL dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EGKVEPYL 10
+GKV PY+
Sbjct: 133 DGKVNPYI 140


>sp|RTCA_PYRAB|RNA 3'-terminal phosphate cyclase|Pyrococcus abyssi (strain GE5 /

Query: 2 IEGKVEPY 9
IEG VEP+
Sbjct: 164 IEGYVEPW 171


>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EGKVEPYL 10
+GKV PY+
Sbjct: 134 DGKVNPYV 141


>sp|ARADH_SACS2|D-ARABINOSE 1-dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 4 GKVEPYL 10
GK++PY+
Sbjct: 315 GKIKPYI 321


>sp|PUS10_HALLT|TRNA pseudouridine synthase Pus10|Halorubrum lacusprofundi (strain ATCC

Query: 1 AIEGKVEPY 9
A+EG+ EP+
Sbjct: 411 AVEGEDEPF 419


>sp|AROC_HALLT|CHORISMATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 AIEGKVEPYL 10
A GK EPY+
Sbjct: 90 ARSGKYEPYV 99




11|SequenceR|60|51|KEDKRAIEGK

>sp|COBQ_METM5|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C5 /

Query: 1 KEDKRAIEGK 10
+ED +A+EGK
Sbjct: 234 EEDSQALEGK 243


>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 1 KEDKRAIEGK 10
+ED +A+EGK
Sbjct: 234 EEDSQALEGK 243


>sp|COBQ_METM6|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C6 /

Query: 1 KEDKRAIEGK 10
+ED +A+EGK
Sbjct: 234 EEDSQALEGK 243


>sp|COBQ_METVS|PROBABLE cobyric acid synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KEDKRAIEGK 10
+ED +AI+GK
Sbjct: 234 EEDSQAIQGK 243


>sp|TRMY_THEKO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 1 KEDKRAIEG 9
KED+R +EG
Sbjct: 162 KEDERFLEG 170


>sp|DTDA_THEGJ|D-AMINOACYL-TRNA deacylase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KEDKRAIEGK 10
K+ KRA+EG+
Sbjct: 202 KQTKRALEGE 211


>sp|DTDA_PYRHO|D-AMINOACYL-TRNA deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KEDKRAIEG 9
K+ KRA+EG
Sbjct: 203 KQTKRALEG 211


>sp|GLCD1_CALMQ|GLUCOSE 1-dehydrogenase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 DKRAIEGK 10
DK IEGK
Sbjct: 42 DKEIIEGK 49


>sp|PYRC_PYRFU|DIHYDROOROTASE furiosus (strain ATCC 43587

Query: 3 DKRAIEG 9
DKR IEG
Sbjct: 12 DKRTIEG 18


>sp|SYDND_META3|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KEDKRAIEGK 10
KED AI+GK
Sbjct: 74 KEDVMAIKGK 83


>sp|RS34_SACS2|SMALL ribosomal subunit protein aS34|Saccharolobus solfataricus (strain

Query: 3 DKRAIEGK 10
DKR ++GK
Sbjct: 53 DKRGLKGK 60




12|SequenceR|65|56|LFSLLKEDKR

>sp|DTDA_METHJ|D-AMINOACYL-TRNA deacylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LFSLLKEDKR 10
L+S L++DKR
Sbjct: 28 LYSFLEDDKR 37


>sp|AROA_SULTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Sulfurisphaera tokodaii (strain DSM

Query: 1 LFSLLKEDK 9
L+SLLKE K
Sbjct: 28 LYSLLKESK 36


>sp|GATD_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 1 LFSLLKEDKR 10
LFS+L ED +
Sbjct: 123 LFSILSEDMK 132




13|SequenceR|70|61|VYVDKLFSLL

>sp|SYH_ARCFU|HISTIDINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DKLFSLL 10
DK+FSLL
Sbjct: 206 DKIFSLL 212


>sp|1A1D_PYRHO|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus horikoshii

Query: 2 YVDKLFSLL 10
Y DKL SLL
Sbjct: 317 YGDKLLSLL 325


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YVDKLFS 8
Y+DKLF+
Sbjct: 300 YLDKLFN 306




14|SequenceR|75|66|PDKSDVYVDK

>sp|SYFB_AERPE|PHENYLALANINE--TRNA ligase beta subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 PDKSDVYV 8
PD+ D+Y+
Sbjct: 47 PDRPDMYI 54


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 2 DKSDVYVDK 10
D +DVYVD+
Sbjct: 83 DTTDVYVDQ 91


>sp|RL15E_METB6|LARGE ribosomal subunit protein eL15|Methanoregula boonei (strain DSM

Query: 1 PDKSDV 6
PDKSDV
Sbjct: 16 PDKSDV 21


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PDKSDVYV 8
P+K+DV++
Sbjct: 80 PEKADVFI 87


>sp|GATD_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosphaera stadtmanae (strain ATCC

Query: 1 PDKSDVYVDK 10
P+ D+YVDK
Sbjct: 317 PEIIDIYVDK 326


>sp|Y1572_METJA|PUTATIVE ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 PDKSDVYVD 9
PDK +VY +
Sbjct: 57 PDKGEVYFE 65


>sp|METK_METMA|S-ADENOSYLMETHIONINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PDKSDVYV 8
PD DVY+
Sbjct: 330 PDVQDVYI 337


>sp|PFDA1_METJA|PREFOLDIN subunit alpha 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KSDVYVDK 10
KSD+YV+K
Sbjct: 79 KSDIYVEK 86


>sp|CBIT_METTH|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 PDKSDVYVD 9
P K+DV VD
Sbjct: 31 PGKNDVAVD 39


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 SDVYVDK 10
SDVYV+K
Sbjct: 830 SDVYVNK 836




15|SequenceR|80|71|QLSSVPDKSD

***** No hits found ******


16|SequenceR|85|76|EAAKVQLSSV

***** No hits found ******


17|SequenceR|90|81|PEQCTEAAKV

>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PEQCTEAAKV 10
P+QC EA +
Sbjct: 42 PKQCAEAISI 51


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 1 PEQCTEAA 8
PE+CT+ A
Sbjct: 342 PERCTDCA 349


>sp|TRUD_NANEQ|PROBABLE tRNA pseudouridine synthase D|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 QCTEAAKV 10
+C EAAK+
Sbjct: 169 ECEEAAKI 176


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QCTEAAK 9
QC EAAK
Sbjct: 5 QCQEAAK 11


>sp|Y1216_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 1 PEQCTEAAKV 10
P++ EAAK+
Sbjct: 164 PDELVEAAKI 173


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PEQCTEAAKV 10
P+QC E V
Sbjct: 40 PKQCAEGINV 49


>sp|TBP_METTP|TATA-BOX-BINDING protein|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PEQCTEAAKV 10
PE+C E ++
Sbjct: 163 PEECEEGVRI 172


>sp|THIM_METAC|HYDROXYETHYLTHIAZOLE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PEQCTEAAKV 10
PE+C + K+
Sbjct: 44 PEECADMTKI 53


>sp|TPIS_METLZ|TRIOSEPHOSPHATE isomerase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 EQCTEAAK 9
E C EAAK
Sbjct: 103 EACVEAAK 110


>sp|GATE_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Haloarcula marismortui (strain ATCC

Query: 1 PEQCTEAAK 9
PEQ EAA+
Sbjct: 197 PEQAREAAE 205




18|SequenceR|95|86|LRFEKPEQCT

>sp|PRIS_PYRCJ|DNA primase small subunit PriS|Pyrobaculum calidifontis (strain DSM

Query: 1 LRFEKPEQCT 10
LRFEKP Q T
Sbjct: 269 LRFEKPFQGT 278


>sp|RIBL_METMS|FAD synthase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 LRFEKPEQCT 10
+R KP QCT
Sbjct: 114 VRLGKPHQCT 123


>sp|Y400_METMA|UPF0228 protein MM_0400|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LRFEKPE 7
+RFEKP+
Sbjct: 92 IRFEKPD 98


>sp|CBIJ_METTH|COBALT-PRECORRIN-6A reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LRFEKPE 7
+RFE+PE
Sbjct: 135 VRFERPE 141


>sp|NEP1_THESM|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus sibiricus

Query: 2 RFEKPEQ 8
RF+KPE+
Sbjct: 31 RFKKPEE 37


>sp|Y4032_METAC|UPF0228 protein MA_4032|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LRFEKPE 7
+RFEKP+
Sbjct: 157 IRFEKPD 163


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 1 LRFEKPEQC 9
L F+KP+ C
Sbjct: 605 LPFKKPDNC 613


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina mazei

Query: 3 FEKPEQC 9
F KPE+C
Sbjct: 178 FAKPEKC 184


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 3 FEKPEQC 9
FE PE C
Sbjct: 200 FEMPENC 206


>sp|MTD_METAC|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 3 FEKPEQC 9
F KPE+C
Sbjct: 178 FAKPEKC 184


>sp|RPO3_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo3|Aeropyrum pernix (strain ATCC 700893

Query: 2 RFEKPEQC 9
++ +PE+C
Sbjct: 81 KYRRPEEC 88




19|SequenceR|100|91|HHDKPLRFEK

>sp|BAX1_SULTO|ENDONUCLEASE Bax1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HDKPLRFE 9
+DKPLRFE
Sbjct: 185 YDKPLRFE 192


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 HDKPLRFEK 10
H KPL +EK
Sbjct: 67 HGKPLLYEK 75


>sp|CUTB_SULAC|GLYCERALDEHYDE dehydrogenase medium chain|Sulfolobus acidocaldarius (strain ATCC

Query: 2 HDKPLR 7
HDKP R
Sbjct: 218 HDKPFR 223


>sp|Y977_METKA|UNCHARACTERIZED glycosyltransferase MK0977|Methanopyrus kandleri (strain AV19 /

Query: 1 HHDKPLRF 8
H D PLRF
Sbjct: 59 HPDLPLRF 66


>sp|PYRC_THEKO|DIHYDROOROTASE kodakarensis (strain ATCC BAA-918

Query: 2 HDKPLRF 8
HD P+RF
Sbjct: 321 HDNPVRF 327


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HHDKPLRFE 9
H DKP+ E
Sbjct: 122 HQDKPIEIE 130


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 1 HHDKPLRFE 9
H DKP+ E
Sbjct: 122 HQDKPIEIE 130


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 HHDKPLRFE 9
H DKP+ E
Sbjct: 122 HQDKPIEIE 130


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 1 HHDKPLRFE 9
H DKP+ E
Sbjct: 122 HQDKPIEIE 130


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 1 HHDKPLRFE 9
H DKP+ E
Sbjct: 122 HQDKPIEIE 130


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 1 HHDKPLRFE 9
H DKP+ E
Sbjct: 122 HQDKPIEIE 130


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 HHDKPLRFE 9
H DKP+ E
Sbjct: 122 HQDKPIEIE 130


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 HHDKPLRFE 9
H DKP+ E
Sbjct: 122 HQDKPIEIE 130


>sp|GUAAA_METTH|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothermobacter

Query: 1 HHDKPL 6
HHDKP+
Sbjct: 153 HHDKPV 158


>sp|SYP_METTH|PROLINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 HHDKPLRF 8
H D P+RF
Sbjct: 133 HTDLPMRF 140


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 1 HHDKPLRF 8
H D+P+R+
Sbjct: 433 HMDEPIRY 440




20|SequenceR|105|96|NIMDFHHDKP

>sp|TSR3_SULTO|16S rRNA aminocarboxypropyltransferase|Sulfurisphaera tokodaii

Query: 2 IMDFHHDKP 10
I+D+H D P
Sbjct: 5 IIDYHRDDP 13


>sp|Y195_METB6|PUTATIVE HTH-type transcriptional regulatory protein|Methanoregula boonei

Query: 2 IMDFHHDK 9
I D+HH+K
Sbjct: 272 ITDYHHEK 279


>sp|IF5A_METM6|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain C6 /

Query: 2 IMDFHHDKP 10
+MD+ H KP
Sbjct: 27 VMDYAHSKP 35


>sp|TSR3_SACS2|16S rRNA aminocarboxypropyltransferase|Saccharolobus solfataricus

Query: 2 IMDFHHDKP 10
I+D+H D P
Sbjct: 5 IIDYHKDDP 13


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IMDFHHDKP 10
+MD+ H+KP
Sbjct: 582 LMDWIHEKP 590


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IMDFHHDKP 10
+MD+ H+KP
Sbjct: 582 LMDWIHEKP 590


>sp|HEM3_HYPBU|PROBABLE porphobilinogen deaminase|Hyperthermus butylicus (strain DSM 5456

Query: 4 DFHHDKP 10
D H DKP
Sbjct: 43 DIHQDKP 49


>sp|Y1105_METKA|PUTATIVE nickel insertion protein|Methanopyrus kandleri (strain AV19 /

Query: 4 DFHHDKP 10
D HH KP
Sbjct: 350 DVHHAKP 356


>sp|TSR3_SACI7|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 2 IMDFHHDKP 10
++D+H D P
Sbjct: 5 VIDYHKDDP 13


>sp|TSR3_SACI6|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 2 IMDFHHDKP 10
++D+H D P
Sbjct: 5 VIDYHKDDP 13


>sp|TSR3_SACI4|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 2 IMDFHHDKP 10
++D+H D P
Sbjct: 5 VIDYHKDDP 13


>sp|TSR3_SACI2|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 2 IMDFHHDKP 10
++D+H D P
Sbjct: 5 VIDYHKDDP 13


>sp|TSR3_SACI1|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 2 IMDFHHDKP 10
++D+H D P
Sbjct: 5 VIDYHKDDP 13


>sp|TSR3_SACI3|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 2 IMDFHHDKP 10
++D+H D P
Sbjct: 5 VIDYHKDDP 13


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 2 IMDFHHDKP 10
+ FH DKP
Sbjct: 294 VKHFHPDKP 302


>sp|IF5A_METVS|TRANSLATION initiation factor 5A|Methanococcus vannielii (strain ATCC 35089

Query: 2 IMDFHHDKP 10
+MD H KP
Sbjct: 27 VMDTAHSKP 35


>sp|IF5A_METM5|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain C5 /

Query: 2 IMDFHHDKP 10
+MD H KP
Sbjct: 27 VMDTTHSKP 35


>sp|IF5A_METM7|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain C7 /

Query: 2 IMDFHHDKP 10
+MD H KP
Sbjct: 27 VMDTAHSKP 35


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 NIMDFHHD 8
NI+D+H +
Sbjct: 310 NILDYHRE 317


>sp|IF5A_METMP|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain DSM 14266

Query: 2 IMDFHHDKP 10
+MD H KP
Sbjct: 27 VMDTAHSKP 35


>sp|GUAAA_METTH|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothermobacter

Query: 6 HHDKP 10
HHDKP
Sbjct: 153 HHDKP 157


>sp|DPHB_METBF|DIPHTHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NIMDFHHDKP 10
N+ DF+ KP
Sbjct: 224 NLKDFNFGKP 233


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 DFHHDKP 10
DF+ DKP
Sbjct: 169 DFYGDKP 175


>sp|MSRA_SULAC|PEPTIDE methionine sulfoxide reductase MsrA|Sulfolobus acidocaldarius

Query: 4 DFHHD 8
D+HHD
Sbjct: 138 DYHHD 142




21|SequenceR|110|101|PISKINIMDF

>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ISKINIMDF 10
+SK+N+ DF
Sbjct: 362 VSKMNLSDF 370


>sp|NAC_METTM|NASCENT polypeptide-associated complex protein|Methanothermobacter

Query: 4 KINIMDF 10
++N+MDF
Sbjct: 50 RVNVMDF 56


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 1 PISKINIMD 9
P+S++N+ D
Sbjct: 291 PLSRLNVAD 299


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 1 PISKINIMD 9
P+S++N+ D
Sbjct: 291 PLSRLNVAD 299


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain ATCC

Query: 1 PISKINIMD 9
P+S++N+ D
Sbjct: 291 PLSRLNVAD 299


>sp|KPRS_PYRAB|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus abyssi (strain GE5 /

Query: 2 ISKINIMDF 10
+SKI+I+D+
Sbjct: 269 VSKISIVDY 277


>sp|Y078_METJA|UNCHARACTERIZED protein MJ0078|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PISKINIMD 9
I+K+NI+D
Sbjct: 33 EITKLNILD 41


>sp|NAC_METTH|NASCENT polypeptide-associated complex protein|Methanothermobacter

Query: 4 KINIMDF 10
K+N+M+F
Sbjct: 50 KVNVMEF 56




22|SequenceR|115|106|SIKGKPISKI

>sp|TRKA2_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 2 IKGKPISKI 10
I GKP+SKI
Sbjct: 391 IVGKPLSKI 399


>sp|FUCA_METM7|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain C7 /

Query: 2 IKGKPISKI 10
IKGKP S++
Sbjct: 61 IKGKPTSEL 69


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KGKPISKI 10
KG P+SKI
Sbjct: 406 KGYPVSKI 413


>sp|FUCA_METVS|L-FUCULOSE phosphate aldolase|Methanococcus vannielii (strain ATCC 35089

Query: 2 IKGKPISKI 10
IKGKP S++
Sbjct: 61 IKGKPTSEL 69


>sp|FUCA_METMP|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 IKGKPISKI 10
IKGKP S++
Sbjct: 61 IKGKPTSEL 69


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GKPISKI 10
GKP+S+I
Sbjct: 407 GKPVSEI 413


>sp|DPO4_SACS2|DNA polymerase IV|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SIKGKPI 7
S+KGKP+
Sbjct: 22 SLKGKPV 28


>sp|DPO4_METS5|DNA polymerase IV|Metallosphaera sedula (strain ATCC 51363

Query: 1 SIKGKPI 7
S+KGKP+
Sbjct: 22 SLKGKPV 28


>sp|DPO4_PICTO|DNA polymerase IV|Picrophilus torridus (strain ATCC 700027

Query: 1 SIKGKPI 7
S+KGKP+
Sbjct: 21 SLKGKPV 27


>sp|LYSZ_CALMQ|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Caldivirga

Query: 2 IKGKPISKI 10
+ GKPI K+
Sbjct: 194 VNGKPIDKV 202


>sp|FUCA_METM5|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain C5 /

Query: 2 IKGKPISKI 10
+KGKP S++
Sbjct: 61 LKGKPTSEL 69


>sp|GLMU_METM7|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C7 /

Query: 1 SIKGKPISKI 10
+IKGKP+ +
Sbjct: 342 NIKGKPVKSV 351


>sp|GLMU_METM5|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C5 /

Query: 1 SIKGKPISKI 10
+IKGKP+ +
Sbjct: 342 NIKGKPVKSV 351


>sp|FUCA_METJA|L-FUCULOSE phosphate aldolase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 IKGKPISK 9
IKGKP S+
Sbjct: 61 IKGKPTSE 68


>sp|GLMU_METMP|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain DSM 14266

Query: 1 SIKGKPISKI 10
+IKGKP+ +
Sbjct: 342 NIKGKPVKSV 351




23|SequenceR|120|111|LAEVISIKGK

>sp|GLMM_METS3|PROBABLE phosphoglucosamine mutase|Methanobrevibacter smithii (strain ATCC

Query: 1 LAEVISIKGK 10
+AE++S KGK
Sbjct: 336 MAELVSNKGK 345


>sp|RL30_METS3|LARGE ribosomal subunit protein uL30|Methanobrevibacter smithii (strain

Query: 1 LAEVISIKGK 10
LAE+I+ +GK
Sbjct: 62 LAEIIAKRGK 71


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 1 LAEVISIKGK 10
+ EVI IKG+
Sbjct: 39 MGEVIKIKGE 48


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 LAEVISIKGK 10
+ EVI IKG+
Sbjct: 36 MGEVIRIKGE 45




24|SequenceR|125|116|NNLLTLAEVI

>sp|THIC2_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 NNLLTLAEVI 10
+ LLTLAE++
Sbjct: 242 SELLTLAELV 251


>sp|Y992_METJA|UNCHARACTERIZED protein MJ0992|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NNLLTLAEVI 10
N+L+TLAE +
Sbjct: 87 NDLITLAEAL 96


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 LLTLAEVI 10
+LT+AEVI
Sbjct: 87 ILTIAEVI 94


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 LLTLAEVI 10
+LT+AEVI
Sbjct: 87 ILTIAEVI 94


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LLTLAEVI 10
+LT+AEVI
Sbjct: 87 ILTIAEVI 94




25|SequenceR|130|121|PFLKHNNLLT

>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 PFLKHNNLL 9
PFLK NL+
Sbjct: 117 PFLKEGNLI 125


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 PFLKHNNLL 9
PFLK NL+
Sbjct: 117 PFLKDGNLI 125


>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 2 FLKHNNLL 9
F+K+NNL+
Sbjct: 143 FIKNNNLM 150


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 FLKHNNLL 9
+LK NNLL
Sbjct: 372 YLKENNLL 379


>sp|IF6_METJA|TRANSLATION initiation factor 6|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FLKHNNL 8
FLK NNL
Sbjct: 87 FLKENNL 93


>sp|PRIS_METST|DNA primase small subunit PriS|Methanosphaera stadtmanae (strain ATCC

Query: 3 LKHNNLL 9
LKH NLL
Sbjct: 235 LKHRNLL 241


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PFLKHNNLL 9
PF+K NL+
Sbjct: 117 PFVKDGNLI 125


>sp|EPPA_METJA|PREPILIN peptidase EppA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLKHNNLLT 10
F+K+N LLT
Sbjct: 199 FIKYNVLLT 207




26|SequenceR|135|126|ATWTEPFLKH

>sp|RL32_METMP|LARGE ribosomal subunit protein eL32|Methanococcus maripaludis (strain

Query: 2 TWTEPFLKH 10
+W PF KH
Sbjct: 35 SWRRPFGKH 43


>sp|RL32_METM7|LARGE ribosomal subunit protein eL32|Methanococcus maripaludis (strain

Query: 2 TWTEPFLKH 10
+W PF KH
Sbjct: 35 SWRRPFGKH 43


>sp|RL32_METM5|LARGE ribosomal subunit protein eL32|Methanococcus maripaludis (strain

Query: 2 TWTEPFLKH 10
+W PF KH
Sbjct: 35 SWRRPFGKH 43


>sp|RL32_METM6|LARGE ribosomal subunit protein eL32|Methanococcus maripaludis (strain

Query: 2 TWTEPFLKH 10
+W PF KH
Sbjct: 35 SWRRPFGKH 43


>sp|PSTK_METJA|L-SERYL-TRNA(SEC) kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WTEPFL 8
W EPFL
Sbjct: 141 WDEPFL 146


>sp|PROB_METBF|GLUTAMATE 5-kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 WTEPFLKH 10
W+E F KH
Sbjct: 101 WSEAFSKH 108


>sp|TRPE2_HALSA|ANTHRANILATE synthase component 1 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 ATWTEPF 7
A W EPF
Sbjct: 143 AAWREPF 149


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WTEPFLK 9
W+EP LK
Sbjct: 210 WSEPILK 216


>sp|Y2102_ARCFU|UNCHARACTERIZED protein AF_2102|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TWTEPFLK 9
TW EP L+
Sbjct: 64 TWVEPVLE 71


>sp|RL4_METTP|LARGE ribosomal subunit protein uL4|Methanothrix thermoacetophila (strain

Query: 3 WTEPFLK 9
W+EP LK
Sbjct: 239 WSEPSLK 245


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 1 ATWTEP 6
ATWT P
Sbjct: 524 ATWTAP 529


>sp|TRPB2_AERPE|TRYPTOPHAN synthase beta chain 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 ATWTEPFLKH 10
A +T PF++H
Sbjct: 275 AGFTYPFIRH 284


>sp|RFCL_METJA|REPLICATION factor C large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 TWTEPFLK 9
TW E +LK
Sbjct: 28 TWIESYLK 35


>sp|Y3119_METAC|UPF0228 protein MA_3119|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TWTEP 6
TWTEP
Sbjct: 135 TWTEP 139


>sp|FPON_METMA|F(420)H(2) dehydrogenase subunit N|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 WTEPFLK 9
W EPF++
Sbjct: 475 WPEPFVE 481




27|SequenceR|140|131|QMIKEATWTE

>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QMIKEATWTE 10
Q+I+ TWTE
Sbjct: 728 QLIRPRTWTE 737


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QMIKEATWTE 10
Q+I+ TWTE
Sbjct: 728 QLIRPRTWTE 737


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QMIKEATWTE 10
Q+I+ TWTE
Sbjct: 728 QLIRPRTWTE 737


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QMIKEATWTE 10
Q+I+ TW E
Sbjct: 728 QLIRPRTWVE 737




28|SequenceR|145|136|ELQYEQMIKE

>sp|Y1695_PYRFU|UNCHARACTERIZED lipoprotein PF1695|Pyrococcus furiosus (strain ATCC 43587

Query: 3 QYEQMIKE 10
+YEQ+IKE
Sbjct: 378 EYEQIIKE 385


>sp|THII_SULAC|PROBABLE tRNA sulfurtransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ELQYEQMIKE 10
E+ YE++IK+
Sbjct: 354 EINYEELIKK 363


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ELQYEQMIKE 10
E +YE++IK+
Sbjct: 190 EEKYEELIKQ 199




29|SequenceR|150|141|NVDKQELQYE

>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 NVDKQELQYE 10
N D QE++YE
Sbjct: 553 NADVQEIRYE 562


>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii (strain

Query: 2 VDKQELQYE 10
+D++EL++E
Sbjct: 311 IDREELRFE 319


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NVDKQELQY 9
N+ K+EL Y
Sbjct: 154 NIKKEELHY 162




30|SequenceR|155|146|YKLLSNVDKQ

>sp|MVK_PYRFU|MEVALONATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LLSNVDKQ 10
+LSNVDK+
Sbjct: 235 ILSNVDKE 242


>sp|PGMI_THEVO|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma volcanium

Query: 1 YKLLSNVDK 9
Y+LLS DK
Sbjct: 148 YRLLSETDK 156


>sp|FEN_THEAC|FLAP endonuclease 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YKLLSNV 7
Y+LLSNV
Sbjct: 33 YQLLSNV 39


>sp|FEN_THEVO|FLAP endonuclease 1|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YKLLSNV 7
Y+LLSNV
Sbjct: 33 YQLLSNV 39


>sp|PGK_METFV|PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 1 YKLLSNVDK 9
YK++ NV+K
Sbjct: 187 YKIIKNVEK 195




31|SequenceR|160|151|EFTVFYKLLS

>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 FTVFYKLL 9
F VFYK+L
Sbjct: 464 FAVFYKIL 471


>sp|NNR_METTH|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanothermobacter

Query: 1 EFTVFYKLLS 10
EF+ F+KL S
Sbjct: 392 EFSSFFKLKS 401


>sp|DHE4_PYRCJ|NADP(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM

Query: 5 FYKLLS 10
FYKLLS
Sbjct: 28 FYKLLS 33


>sp|Y600_ARCFU|UNCHARACTERIZED protein AF_0600|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TVFYKLLS 10
T+FYK+L+
Sbjct: 15 TIFYKILN 22




32|SequenceR|165|156|PFIEVEFTVF

>sp|TTDA_METJA|PUTATIVE L(+)-tartrate dehydratase subunit alpha|Methanocaldococcus

Query: 1 PFIEVEF 7
PFI +EF
Sbjct: 123 PFINIEF 129


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus fulgidus

Query: 1 PFIEVE 6
PF+EVE
Sbjct: 330 PFVEVE 335


>sp|RL5_HALWD|LARGE ribosomal subunit protein uL5|Haloquadratum walsbyi (strain DSM

Query: 2 FIEVEFTV 9
FIE EFTV
Sbjct: 163 FIESEFTV 170


>sp|TRUA_METMJ|TRNA pseudouridine synthase A|Methanoculleus marisnigri (strain ATCC

Query: 2 FIEVEFTVF 10
FI+ EF VF
Sbjct: 157 FIDGEFAVF 165


>sp|PRIS_SULTO|DNA primase small subunit PriS|Sulfurisphaera tokodaii (strain DSM

Query: 1 PFIEVEFTVF 10
P++ E T+F
Sbjct: 274 PYVSAELTLF 283




33|SequenceR|175|161|KSRIAKKDEPPFIEV

>sp|KCY_SULTO|CYTIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 RIAKKDEPPF 12
RIAK+D PF
Sbjct: 108 RIAKRDNIPF 117


>sp|KAE1_SACI6|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 7 KDEPPFI 13
KD+PP+I
Sbjct: 19 KDQPPYI 25


>sp|KAE1_SACI4|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 7 KDEPPFI 13
KD+PP+I
Sbjct: 19 KDQPPYI 25


>sp|KAE1_SACI3|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 7 KDEPPFI 13
KD+PP+I
Sbjct: 19 KDQPPYI 25


>sp|RL32_METJA|LARGE ribosomal subunit protein eL32|Methanocaldococcus jannaschii

Query: 1 KSRIAKKDEPPFIEV 15
K R+ K++PP +E+
Sbjct: 42 KMRLKWKEKPPVVEI 56


>sp|AROD_IGNH4|3-DEHYDROQUINATE dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 6 KKDEPPFIEV 15
+K+ PPF+E+
Sbjct: 39 RKETPPFLEM 48


>sp|KAE1_SACI7|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 7 KDEPPFI 13
KD+PP+I
Sbjct: 19 KDQPPYI 25


>sp|KAE1_SACI2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 7 KDEPPFI 13
KD+PP+I
Sbjct: 19 KDQPPYI 25


>sp|KAE1_SACI1|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 7 KDEPPFI 13
KD+PP+I
Sbjct: 19 KDQPPYI 25


>sp|UPP_METTH|URACIL phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 6 KKDEPPF 12
+ DEPPF
Sbjct: 109 RSDEPPF 115


>sp|SYFB_SULTO|PHENYLALANINE--TRNA ligase beta subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KSRIAKKDEPPFIEV 15
K+RI K + FI+V
Sbjct: 212 KTRINSKTQSLFIDV 226


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KSRIAKKDEPPFIE 14
K+ I K PP+IE
Sbjct: 50 KNEITKLLSPPYIE 63


>sp|AMPD_METMA|ANHYDROMEVALONATE phosphate decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SRIAKKDEPPFI 13
SRIAKK + P +
Sbjct: 30 SRIAKKTKGPVL 41


>sp|RIO1_METJA|RIO-TYPE serine/threonine-protein kinase Rio1|Methanocaldococcus jannaschii

Query: 4 IAKKDEPPFIE 14
+ K DEP FI+
Sbjct: 221 LVKDDEPVFID 231


>sp|MOBA_METTH|PROBABLE molybdenum cofactor guanylyltransferase|Methanothermobacter

Query: 8 DEPPFIEV 15
D+ PFIE+
Sbjct: 28 DDRPFIEI 35


>sp|CAPPA_PICTO|PHOSPHOENOLPYRUVATE carboxylase|Picrophilus torridus (strain ATCC 700027

Query: 2 SRIAKKDEPPFIEV 15
+ + K+D PP EV
Sbjct: 118 NTVYKRDIPPIFEV 131


>sp|THIE_PICTO|THIAMINE-PHOSPHATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 7 KDEPPF 12
KD+PPF
Sbjct: 84 KDDPPF 89


>sp|Y179_THEAC|UPF0200 protein Ta0179|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SRIAKKDEP 10
SRI K+D P
Sbjct: 114 SRILKRDRP 122


>sp|Y802_METJA|UNCHARACTERIZED protein MJ0802|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IAKKDEPPFI 13
IAK+ EP FI
Sbjct: 40 IAKEKEPYFI 49


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 5 AKKDEPPFIE 14
+ D+PPF++
Sbjct: 185 SSTDKPPFVD 194


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 7 KDEPPFIE 14
D+PPF++
Sbjct: 187 NDKPPFVD 194




34|SequenceR|175|166|KSRIAKKDEP

>sp|PRIS_METLZ|DNA primase small subunit PriS|Methanocorpusculum labreanum (strain

Query: 2 SRIAKKDEP 10
SR A+ DEP
Sbjct: 278 SRAAQADEP 286


>sp|Y179_THEAC|UPF0200 protein Ta0179|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SRIAKKDEP 10
SRI K+D P
Sbjct: 114 SRILKRDRP 122


>sp|MCRC_METTM|METHYL-COENZYME M reductase I operon|Methanothermobacter marburgensis (strain ATCC

Query: 1 KSRIAKKDEP 10
K+R+ DEP
Sbjct: 151 KTRVVMPDEP 160




THE END