NDUF3_HUMAN Blast Output
Viruses
1|Sequence|1|10|MATALALRSL

***** No hits found ******


2|Sequence|6|15|ALRSLYRARP

>sp|VP4_ROTB9|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 ALRSLYRARP 10
+++++YRA+P
Sbjct: 237 SVQNIYRAKP 246


>sp|TERL_LAMBD|TERMINASE, large subunit|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 ALRSLYRARP 10
LRSL+R P
Sbjct: 18 GLRSLFRPEP 27


>sp|CAPSD_GOCV|PROBABLE capsid protein|Goose circovirus (GoCV)

Query: 5 LYRARP 10
LYRARP
Sbjct: 3 LYRARP 8


>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P

Query: 1 ALRSLYRARP 10
ALR LY+ P
Sbjct: 148 ALRKLYKMTP 157




3|Sequence|11|20|YRARPSLRCP

>sp|VL1_MMPV1|MAJOR capsid protein L1|Macaca mulata papillomavirus 1 (Rhpv

Query: 2 RARPSLRCP 10
RARP+LR P
Sbjct: 473 RARPTLRAP 481


>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 1 YRARPSLRCP 10
Y RPS+ CP
Sbjct: 1576 YWIRPSVGCP 1585


>sp|MOVP_MRFVC|PUTATIVE movement protein|Maize rayado fino virus (isolate

Query: 1 YRARPSLRCP 10
+ +RPSL CP
Sbjct: 290 FSSRPSLACP 299


>sp|GAG_SIVVT|GAG polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 2 RARPSLRC 9
R RP LRC
Sbjct: 392 RQRPPLRC 399


>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 YRARPSLRCP 10
Y A P LR P
Sbjct: 346 YEANPELRLP 355


>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 YRARPSLRCP 10
Y A P LR P
Sbjct: 345 YEANPELRLP 354


>sp|CAPSD_AQRVG|INNER capsid protein VP3|Aquareovirus G (isolate American grass

Query: 4 RPSLRCP 10
RPS+ CP
Sbjct: 438 RPSILCP 444




4|Sequence|16|25|SLRCPPVELP

>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 1 SLRCPPVELP 10
++ CP +ELP
Sbjct: 2799 TMNCPQIELP 2808


>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus

Query: 1 SLRCPPVE 8
S +CPP+E
Sbjct: 73 SAKCPPIE 80


>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate

Query: 1 SLRCPPVE 8
S +CPP+E
Sbjct: 73 SAKCPPIE 80


>sp|PG204_VACCW|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain

Query: 1 SLRCPPVE 8
S +CPP+E
Sbjct: 70 SAKCPPIE 77


>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain

Query: 1 SLRCPPVE 8
S +CPP+E
Sbjct: 70 SAKCPPIE 77


>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain

Query: 1 SLRCPPVE 8
S +CPP+E
Sbjct: 72 SAKCPPIE 79


>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)

Query: 1 SLRCPPVE 8
S +CPP+E
Sbjct: 70 SAKCPPIE 77


>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 194 CPPIEL 199


>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPIEL 190


>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 183 CPPIEL 188


>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPIEL 190


>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 184 CPPIEL 189


>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15

Query: 3 RCPPVEL 9
+CPP+EL
Sbjct: 185 KCPPLEL 191


>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24

Query: 3 RCPPVEL 9
RCPP++L
Sbjct: 186 RCPPIKL 192


>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPIEL 190


>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45

Query: 2 LRCPPVEL 9
L+CPP+ L
Sbjct: 550 LKCPPILL 557


>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18

Query: 2 LRCPPVEL 9
L+CPP+ L
Sbjct: 564 LKCPPILL 571


>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPIEL 190


>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 186 CPPIEL 191


>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 214 CPPIEL 219


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 1 SLRCPPVELP 10
SLRCP + P
Sbjct: 750 SLRCPNLFFP 759


>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49

Query: 3 RCPPVEL 9
+CPP+EL
Sbjct: 185 KCPPLEL 191


>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPIEL 190


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 2 LRCPP 6
LRCPP
Sbjct: 3202 LRCPP 3206


>sp|VL1_CRPVK|MAJOR capsid protein L1|Cottontail rabbit papillomavirus (strain Kansas)

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPIEL 190


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 2 LRCPP 6
LRCPP
Sbjct: 3292 LRCPP 3296


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 2 LRCPP 6
LRCPP
Sbjct: 3211 LRCPP 3215


>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37

Query: 3 RCPPVEL 9
+CPP+EL
Sbjct: 185 QCPPLEL 191


>sp|1A_BBMV|REPLICATION protein 1a|Broad bean mottle virus

Query: 1 SLRCPPVEL 9
++RCPP L
Sbjct: 293 NVRCPPESL 301


>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 187 CPPIEL 192


>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 186 CPPIEL 191


>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 186 CPPIEL 191


>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 187 CPPIEL 192


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 1 SLRCPPVEL 9
+L CPP++L
Sbjct: 881 ALFCPPIKL 889


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)

Query: 1 SLRCPPVEL 9
+L CPP++L
Sbjct: 881 ALFCPPIKL 889


>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190


>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33

Query: 2 LRCPPVEL 9
L+CPP+ L
Sbjct: 550 LKCPPLLL 557


>sp|VL1_COPV6|MAJOR capsid protein L1|Canine oral papillomavirus (strain Y62)

Query: 3 RCPPVEL 9
+CPP+EL
Sbjct: 187 QCPPIEL 193


>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 186 CPPIEL 191


>sp|VL1_BPV3|MAJOR capsid protein L1|Bovine papillomavirus type 3

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 182 CPPIEL 187


Query: 3 RCPPVE 8
RCPP E
Sbjct: 431 RCPPKE 436


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 2 LRCPPV 7
++CPPV
Sbjct: 539 IKCPPV 544


>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50

Query: 3 RCPPVEL 9
+CPP++L
Sbjct: 183 KCPPIQL 189


>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190


>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 186 CPPLEL 191


>sp|VL1_BPV5|MAJOR capsid protein L1|Bovine papillomavirus type 5

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 180 CPPIEL 185


>sp|DPOLA_BPPM6|DNA-DIRECTED DNA polymerase|Pseudomonas phage M6

Query: 4 CPPVELP 10
C P+ELP
Sbjct: 635 CTPLELP 641


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 2 LRCPPV 7
++CPPV
Sbjct: 538 IKCPPV 543


>sp|VL1_BPV4|MAJOR capsid protein L1|Bos taurus papillomavirus 4 (Bovine

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 181 CPPIEL 186


>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190


>sp|VL1_BPV2|MAJOR capsid protein L1|Bos taurus papillomavirus 2 (Bovine

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 181 CPPLEL 186


>sp|VL1_BPV1|MAJOR capsid protein L1|Bovine papillomavirus type 1

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 181 CPPLEL 186


>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 184 CPPLEL 189


>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 184 CPPLEL 189


>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190


>sp|VL1_PCPV1|MAJOR capsid protein L1|Pygmy chimpanzee papillomavirus type 1

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 182 CPPLEL 187


>sp|VL1_PAPVE|MAJOR capsid protein L1|European elk papillomavirus (EEPV)

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 183 CPPIEL 188


>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 182 CPPLEL 187


>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 212 CPPLEL 217


>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 208 CPPLEL 213


>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190


>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 181 CPPLEL 186


>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 182 CPPLEL 187


>sp|VL1_OVPVD|MAJOR capsid protein L1|Odocoileus virginianus papillomavirus 1 (DPV)

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 182 CPPIEL 187


>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190


>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 184 CPPLEL 189


>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 182 CPPLEL 187


>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 215 CPPLEL 220


>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 182 CPPLEL 187


>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190


>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 184 CPPLEL 189


>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 181 CPPLEL 186


>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 181 CPPLEL 186


>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 211 CPPLEL 216


>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 183 CPPLEL 188


>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 186 CPPLEL 191


>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 192 CPPLEL 197


>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190


>sp|CVC1_ALHV1|CAPSID vertex component 1|Alcelaphine herpesvirus 1 (strain C500)

Query: 5 PPVELP 10
PPVELP
Sbjct: 137 PPVELP 142


>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 184 CPPLEL 189


>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190


>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 183 CPPLEL 188


>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44

Query: 4 CPPVEL 9
CPP+EL
Sbjct: 182 CPPLEL 187




5|Sequence|21|30|PVELPWAPRR

>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1 PVELPWAP 8
PVELPW P
Sbjct: 1829 PVELPWEP 1836


Query: 2 VELPWAP 8
VE PWAP
Sbjct: 1806 VEFPWAP 1812


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 1 PVELPWAP 8
PVELPW P
Sbjct: 1806 PVELPWEP 1813


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 1 PVELPWAP 8
PVELPW P
Sbjct: 1806 PVELPWEP 1813


>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)

Query: 1 PVELPWAP 8
PVELPW P
Sbjct: 498 PVELPWEP 505


Query: 2 VELPWAP 8
VE PWAP
Sbjct: 475 VEFPWAP 481


>sp|RDRP_WCMVM|RNA replication protein|White clover mosaic virus (strain

Query: 3 ELPWAP 8
+LPWAP
Sbjct: 454 DLPWAP 459


>sp|CAPSD_LRVLG|MAJOR capsid protein|Leishmania RNA virus 1 -

Query: 2 VELPWAPR 9
+ELP APR
Sbjct: 705 IELPLAPR 712


>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)

Query: 1 PVELPWAP 8
PV PW P
Sbjct: 971 PVSTPWTP 978


>sp|RDRP_WCMVO|RNA replication protein|White clover mosaic virus (strain

Query: 3 ELPWAP 8
+LPWAP
Sbjct: 454 DLPWAP 459


>sp|AN_SHV21|SHUTOFF alkaline exonuclease|Saimiriine herpesvirus 2 (strain 11)

Query: 3 ELPWAP 8
E PWAP
Sbjct: 467 EYPWAP 472


>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 VELPWAPR 9
++LPW PR
Sbjct: 145 LQLPWVPR 152


>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 VELPWAPR 9
++LPW PR
Sbjct: 145 LQLPWVPR 152


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 5 PWAPR 9
PWAPR
Sbjct: 18 PWAPR 22


>sp|VE4_HPV18|PROTEIN E4|Human papillomavirus type 18

Query: 1 PVELPWAPRR 10
P PWAP+R
Sbjct: 29 PAPCPWAPQR 38


>sp|YL310_MIMIV|UNCHARACTERIZED protein L310|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PVELPWAPRR 10
PVE WAP +
Sbjct: 27 PVEDYWAPTK 36




6|Sequence|26|35|WAPRRGHRLS

>sp|YR847_MIMIV|PUTATIVE ankyrin repeat protein R847|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WAPRRGHR 8
WA R GHR
Sbjct: 99 WASRNGHR 106


>sp|CAPSD_SFAVA|MAJOR capsid protein|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 1 WAPRRGHRL 9
W P+ GH+L
Sbjct: 111 WLPKLGHKL 119


>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)

Query: 3 PRRGHR 8
PRRGH+
Sbjct: 1130 PRRGHK 1135


>sp|YR267_MIMIV|PUTATIVE ankyrin repeat protein R267|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WAPRRGHRL 9
WA R GH L
Sbjct: 351 WAARNGHLL 359


>sp|YR911_MIMIV|PUTATIVE ankyrin repeat protein R911|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WAPRRGH 7
WA R GH
Sbjct: 326 WASRNGH 332


Query: 1 WAPRRGH 7
WA R GH
Sbjct: 386 WASRNGH 392


>sp|YR901_MIMIV|PUTATIVE ankyrin repeat protein R901|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WAPRRGH 7
WA R GH
Sbjct: 145 WASRNGH 151


>sp|YR863_MIMIV|PUTATIVE ankyrin repeat protein R863|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WAPRRGH 7
WA R GH
Sbjct: 152 WASRNGH 158


Query: 1 WAPRRGH 7
WA R GH
Sbjct: 422 WASRNGH 428


Query: 1 WAPRRGH 7
WA R GH
Sbjct: 482 WASRNGH 488


>sp|YL483_MIMIV|PUTATIVE ankyrin repeat protein L483|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WAPRRGH 7
WA R GH
Sbjct: 175 WASRNGH 181


>sp|YL063_MIMIV|PUTATIVE ankyrin repeat protein L63|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WAPRRGH 7
WA R GH
Sbjct: 497 WASRNGH 503


>sp|YL014_MIMIV|PUTATIVE ankyrin repeat protein L14|Acanthamoeba polyphaga mimivirus

Query: 1 WAPRRGH 7
WA R GH
Sbjct: 86 WASRNGH 92


>sp|YL059_MIMIV|PUTATIVE ankyrin repeat protein L59|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WAPRRGH 7
WA R GH
Sbjct: 195 WAARNGH 201


>sp|YL025_MIMIV|PUTATIVE ankyrin repeat protein L25|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WAPRRGH 7
WA R GH
Sbjct: 162 WASRSGH 168


Query: 1 WAPRRGH 7
WA R GH
Sbjct: 222 WASRSGH 228


>sp|VE4_HPV16|PROTEIN E4|Human papillomavirus type 16

Query: 1 WAPRRGHRLS 10
WAP++ RLS
Sbjct: 34 WAPKKHRRLS 43


>sp|YL022_MIMIV|PUTATIVE ankyrin repeat protein L22|Acanthamoeba polyphaga mimivirus

Query: 1 WAPRRGH 7
WA R GH
Sbjct: 40 WASRYGH 46


>sp|YR787_MIMIV|PUTATIVE ankyrin repeat protein R787|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WAPRRGH 7
W+ R+GH
Sbjct: 281 WSSRQGH 287


>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)

Query: 1 WAPRRGHR 8
W PR HR
Sbjct: 587 WVPRVTHR 594




7|Sequence|31|40|GHRLSPADDE

>sp|YVBF_VACCC|UNCHARACTERIZED 8.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 GHRLSPAD 8
GH +SP D
Sbjct: 38 GHTISPVD 45


>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 GHRLSP 6
GHR+SP
Sbjct: 126 GHRISP 131


>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 GHRLSP 6
GHR+SP
Sbjct: 126 GHRVSP 131


>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 GHRLSP 6
GHR+SP
Sbjct: 126 GHRVSP 131


>sp|VIF_HV1V9|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 GHRLSPADD 9
GHR+SP D
Sbjct: 126 GHRVSPICD 134


>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P

Query: 4 LSPADDE 10
LSP+DDE
Sbjct: 177 LSPSDDE 183




8|Sequence|36|45|PADDELYQRT

>sp|VG70_ICHVA|UNCHARACTERIZED protein ORF70|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 PADDELY 7
P DDE+Y
Sbjct: 81 PCDDEMY 87


>sp|A1_BPT5|PROTEIN A1|Escherichia phage T5 (Enterobacteria phage

Query: 1 PADDELYQR 9
PA+ ELY R
Sbjct: 416 PANAELYHR 424


>sp|VG39_ICHVA|UNCHARACTERIZED protein ORF39|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 PADDELYQRT 10
PAD LY+ T
Sbjct: 1038 PADRNLYRET 1047


>sp|VNS1_AQRVC|NON-STRUCTURAL protein 1|Aquareovirus C (isolate Golden shiner/USA/GSRV/1977)

Query: 2 ADDELYQRT 10
ADDE Y R+
Sbjct: 270 ADDETYNRS 278


>sp|MVP_LNYV3|PROBABLE movement protein 4b|Lettuce necrotic yellows virus (isolate

Query: 1 PADDELYQRT 10
P+D+++Y R+
Sbjct: 232 PSDEDIYYRS 241


>sp|GE_CHV1E|ENVELOPE glycoprotein E|Cercopithecine herpesvirus 1 (strain E2490)

Query: 2 ADDELY 7
ADDELY
Sbjct: 456 ADDELY 461




9|Sequence|41|50|LYQRTRISLL

>sp|YR571_MIMIV|UNCHARACTERIZED protein R571|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 YQRTRI 7
YQRTRI
Sbjct: 141 YQRTRI 146




10|Sequence|46|55|RISLLQREAA

***** No hits found ******


11|Sequence|51|60|QREAAQAMYI

>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73

Query: 1 QREAAQAMY 9
Q+E AQA+Y
Sbjct: 60 QQEIAQALY 68


>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34

Query: 1 QREAAQAMY 9
Q+E AQA+Y
Sbjct: 60 QQEIAQALY 68


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 1 QREAAQAMYI 10
+REA A+YI
Sbjct: 161 EREATAAIYI 170


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 1 QREAAQAMYI 10
+REA A+YI
Sbjct: 161 EREATAAIYI 170


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 1 QREAAQAMYI 10
+REA A+YI
Sbjct: 161 EREATAAIYI 170




12|Sequence|56|65|QAMYIDSYNS

***** No hits found ******


13|Sequence|61|70|DSYNSRGFMI

>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 SYNSRGFMI 10
+YN+RGF++
Sbjct: 84 TYNARGFLL 92


>sp|BXD_CBDP|BOTULINUM neurotoxin type D|Clostridium botulinum D phage (Clostridium

Query: 3 YNSRGFMI 10
YNSR +MI
Sbjct: 1161 YNSRKYMI 1168


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 1 DSYNSRGFM 9
D+Y S GF+
Sbjct: 510 DTYTSAGFL 518


>sp|BP54_BPT4|BASEPLATE tail-tube junction protein gp54|Enterobacteria phage T4

Query: 2 SYNSRGFMI 10
+YNS G MI
Sbjct: 117 AYNSSGLMI 125


>sp|LOADL_BPT4|SLIDING-CLAMP-LOADER large subunit|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 DSYNSRGFM 9
DSY+S+G +
Sbjct: 212 DSYSSKGVL 220


>sp|YL377_MIMIV|PUTATIVE ATP-dependent RNA helicase L377|Acanthamoeba polyphaga mimivirus

Query: 1 DSYNSRGFMI 10
D YN G++I
Sbjct: 871 DKYNRPGYLI 880




14|Sequence|66|75|RGFMINGNRV

>sp|ORF2_PSHV1|UNCHARACTERIZED protein sORF2|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 GFMINGNR 9
G M NGNR
Sbjct: 812 GLMFNGNR 819


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 1 RGFMING 7
RGF++NG
Sbjct: 1156 RGFILNG 1162


>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1

Query: 1 RGFMINGNRV 10
RG ++ GNR+
Sbjct: 132 RGLVVGGNRM 141


>sp|YO35_BPHC1|UNCHARACTERIZED 58.7 kDa protein in|Haemophilus phage HP1 (strain HP1c1)

Query: 2 GFMINGNRV 10
G +INGN++
Sbjct: 202 GAIINGNKI 210


>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2

Query: 2 GFMINGNRV 10
GF ING ++
Sbjct: 1141 GFQINGPKI 1149


>sp|YR706_MIMIV|UNCHARACTERIZED protein R706|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RGFMINGN 8
R FM+ GN
Sbjct: 163 RNFMVKGN 170


>sp|L_MOBVC|RNA-DIRECTED RNA polymerase L|Mobala mammarenavirus (isolate Rat/Central

Query: 2 GFMINGN 8
GF +NGN
Sbjct: 90 GFKLNGN 96


>sp|POLN_ELV|NON-STRUCTURAL replication polyprotein|Erysimum latent virus (ELV)

Query: 2 GFMINGN 8
GF +NGN
Sbjct: 795 GFRLNGN 801




15|Sequence|71|80|NGNRVLGPCA

>sp|SPIKE_CVMJH|SPIKE glycoprotein|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 NGNRVLG 7
NGNRV+G
Sbjct: 170 NGNRVIG 176


>sp|SPIKE_CVMJC|SPIKE glycoprotein|Murine coronavirus (strain JHMV /

Query: 1 NGNRVLG 7
NGNRV+G
Sbjct: 170 NGNRVIG 176


>sp|SPIKE_CVM4|SPIKE glycoprotein|Murine coronavirus (strain 4) (MHV-4)

Query: 1 NGNRVLG 7
NGNRV+G
Sbjct: 170 NGNRVIG 176


>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 2 GNRVLGP 8
GNRV GP
Sbjct: 607 GNRVEGP 613


>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate

Query: 2 GNRVLGPCA 10
GN++L PC
Sbjct: 728 GNKLLLPCG 736


>sp|PRO_MPMV|GAG-PRO polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 2 GNRVLGP 8
GNRV GP
Sbjct: 607 GNRVEGP 613




16|Sequence|76|85|LGPCALLPHS

>sp|CATV_NPVSE|VIRAL cathepsin|Spodoptera exigua nuclear polyhedrosis virus

Query: 3 PCALLPH 9
PCAL PH
Sbjct: 220 PCALKPH 226


>sp|CATV_NPVMC|VIRAL cathepsin|Mamestra configurata nucleopolyhedrovirus (MacoNPV)

Query: 3 PCALLPH 9
PCA+ PH
Sbjct: 220 PCAVKPH 226


>sp|P69_OYMV|66 kDa protein|Ononis yellow mosaic virus

Query: 1 LGPCALLPHS 10
LGPC L PH+
Sbjct: 241 LGPCPLPPHN 250


>sp|REP_PCV1|REPLICATION-ASSOCIATED protein|Porcine circovirus 1 (PCV1)

Query: 3 PCALLPH 9
PCAL P+
Sbjct: 302 PCALFPY 308


>sp|P69_TYMVA|69 kDa protein|Turnip yellow mosaic virus (isolate

Query: 1 LGPCALLPHS 10
LGPC L P+S
Sbjct: 241 LGPCPLAPNS 250


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1 LGPCALLP 8
LGPC + P
Sbjct: 128 LGPCTMPP 135


>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV

Query: 3 PCALLP 8
PCA LP
Sbjct: 321 PCAFLP 326


>sp|MVP_TAVCV|MOVEMENT protein|Taro vein chlorosis virus (TAVCV)

Query: 1 LGPCALLP 8
L PC L+P
Sbjct: 150 LSPCKLIP 157


>sp|P69_TYMV|69 kDa protein|Turnip yellow mosaic virus

Query: 1 LGPCALLPHS 10
LGP L PHS
Sbjct: 241 LGPRPLAPHS 250




17|Sequence|81|90|LLPHSVVQWN

>sp|GB_EHV4|ENVELOPE glycoprotein B|Equine herpesvirus 4 (strain 1942)

Query: 3 PHSVVQWN 10
PH V WN
Sbjct: 314 PHVTVSWN 321


>sp|GB_EHV1V|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain V592)

Query: 3 PHSVVQWN 10
PH V WN
Sbjct: 373 PHVTVSWN 380


>sp|GB_EHV1D|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain Kentucky

Query: 3 PHSVVQWN 10
PH V WN
Sbjct: 373 PHVTVSWN 380


>sp|GB_EHV1B|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain Ab4p)

Query: 3 PHSVVQWN 10
PH V WN
Sbjct: 373 PHVTVSWN 380


>sp|GB_EHV1A|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain AB1)

Query: 3 PHSVVQWN 10
PH V WN
Sbjct: 373 PHVTVSWN 380


>sp|GB_EHV1|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain HVS25A)

Query: 3 PHSVVQWN 10
PH V WN
Sbjct: 373 PHVTVSWN 380


>sp|RDRP_CARMS|PROBABLE RNA-directed RNA polymerase|Carnation mottle virus (isolate

Query: 4 HSVVQWN 10
HS+V WN
Sbjct: 636 HSLVHWN 642


>sp|RDRP_CARMV|RNA-DIRECTED RNA polymerase|Carnation mottle virus (CarMV)

Query: 4 HSVVQWN 10
HS+V WN
Sbjct: 636 HSLVHWN 642


>sp|TERL_BPSF5|PUTATIVE terminase large subunit|Shigella phage SfV (Shigella flexneri

Query: 1 LLPHSVVQW 9
LLPH+ +W
Sbjct: 67 LLPHTKGEW 75


>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)

Query: 3 PHSVVQWN 10
PH V WN
Sbjct: 353 PHLTVGWN 360


>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 PHSVVQWN 10
PH V WN
Sbjct: 353 PHLTVGWN 360


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 1 LLPHSVVQ 8
+LPHSVV
Sbjct: 2985 ILPHSVVH 2992


>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca

Query: 1 LLPHSVVQ 8
+LPHSVV
Sbjct: 2985 ILPHSVVH 2992


>sp|P3_PCVC|UNCHARACTERIZED protein p3|Penicillium chrysogenum virus (isolate Caston/2003)

Query: 1 LLPHSVVQ 8
+LPH VVQ
Sbjct: 482 ILPHLVVQ 489


>sp|VP1_RRSVT|STRUCTURAL protein VP1|Rice ragged stunt virus (isolate

Query: 2 LPHSVVQWN 10
+P SV WN
Sbjct: 790 IPQSVYVWN 798


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 4 HSVVQW 9
HSV++W
Sbjct: 474 HSVIEW 479


>sp|RDRP_BOTVF|RNA replication protein|Botrytis virus F (isolate Botrytis

Query: 1 LLPHSVVQW 9
LL HS+ W
Sbjct: 519 LLSHSIASW 527


>sp|SPIKE_BC512|SPIKE glycoprotein|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 LLPHSVVQW 9
LLP+ QW
Sbjct: 50 LLPNQTAQW 58




18|Sequence|86|95|VVQWNVGSHQ

>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 2 VQWNVGSH 9
V+W VGSH
Sbjct: 136 VEWQVGSH 143


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1676 VVQWATGAH 1684


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683


>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)

Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683


>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain

Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683


>sp|L_EBLV1|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 1 (strain

Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 4 WNVGSHQ 10
WN+G H+
Sbjct: 521 WNIGQHR 527


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)

Query: 4 WNVGSHQ 10
WN+G H+
Sbjct: 521 WNIGQHR 527


>sp|P4_PCVC|UNCHARACTERIZED protein p4|Penicillium chrysogenum virus (isolate Caston/2003)

Query: 3 QWNVGSH 9
QW++G H
Sbjct: 434 QWDIGQH 440


>sp|VF205_IIV6|PUTATIVE DNA ligase 205R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 VQWNVG 7
++WNVG
Sbjct: 299 IEWNVG 304


>sp|VF022_IIV6|PUTATIVE helicase 022L|Invertebrate iridescent virus 6 (IIV-6)

Query: 4 WNVGSHQ 10
W +GSH+
Sbjct: 585 WRLGSHE 591


>sp|US03_HCMVA|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 QWNVGSH 9
+WN+G H
Sbjct: 97 EWNIGGH 103


>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3 QWNVGSH 9
+WN+G H
Sbjct: 97 EWNIGGH 103




19|Sequence|91|100|VGSHQDITED

>sp|YL442_MIMIV|UNCHARACTERIZED protein L442|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GSHQDITED 10
GSH+ ITED
Sbjct: 448 GSHKLITED 456


>sp|UNG_SHV21|URACIL-DNA glycosylase|Saimiriine herpesvirus 2 (strain 11)

Query: 4 HQDITED 10
HQDIT D
Sbjct: 15 HQDITSD 21


>sp|VP2_POVLY|MINOR capsid protein VP2|B-lymphotropic polyomavirus (LPV)

Query: 2 GSHQDITED 10
G+HQ +T+D
Sbjct: 280 GAHQRVTQD 288


>sp|TAT_SIVVT|PROTEIN Tat|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 SHQDITED 10
SHQD++ED
Sbjct: 11 SHQDLSED 18


>sp|VP10_BPPRD|PROTEIN P10|Enterobacteria phage PRD1 (Bacteriophage PRD1)

Query: 1 VGSHQDITED 10
V SH DIT D
Sbjct: 124 VASHYDITPD 133


>sp|CAPSD_SPTNK|PUTATIVE capsid protein V20|Sputnik virophage

Query: 1 VGSHQDITED 10
+ SH DIT D
Sbjct: 241 IWSHSDITND 250


>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 2 GSHQDI 7
GSHQDI
Sbjct: 1244 GSHQDI 1249


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 2 GSHQDI 7
GSHQDI
Sbjct: 1244 GSHQDI 1249


>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 2 GSHQDI 7
GSHQDI
Sbjct: 1244 GSHQDI 1249


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 2 GSHQDI 7
GSHQDI
Sbjct: 1245 GSHQDI 1250


>sp|RDRP_MNSV|RNA-DIRECTED RNA polymerase|Melon necrotic spot virus (MNSV)

Query: 2 GSHQDITE 9
G+H D+TE
Sbjct: 285 GTHPDMTE 292


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 1 VGSHQDITED 10
+GS QD+ D
Sbjct: 245 IGSQQDLVAD 254


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 1 VGSHQDITED 10
+GS QD+ D
Sbjct: 245 IGSQQDLVAD 254




20|Sequence|96|105|DITEDSFSLF

>sp|MCP_GAHVM|MAJOR capsid protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 DITEDSFSLF 10
++TED SLF
Sbjct: 1336 ELTEDPCSLF 1345


>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate

Query: 1 DITEDSFSLF 10
+IT D F LF
Sbjct: 170 EITSDGFKLF 179


>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain

Query: 1 DITEDSFSLF 10
+IT D F LF
Sbjct: 170 EITSDGFKLF 179




21|Sequence|101|110|SFSLFWLLEP

>sp|Y383B_ATV|TNPB-LIKE protein ORF383B|Acidianus two-tailed virus (ATV)

Query: 2 FSLFWLLE 9
FSLFW+ E
Sbjct: 36 FSLFWMKE 43


>sp|YL764_MIMIV|PUTATIVE ankyrin repeat protein L764|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 SFSLFWLLE 9
+F+L WLLE
Sbjct: 104 NFNLLWLLE 112


>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)

Query: 1 SFSLFWLL 8
SFSLF+LL
Sbjct: 121 SFSLFYLL 128


>sp|Y383A_ATV|TNPB-LIKE protein ORF383a|Acidianus two-tailed virus (ATV)

Query: 2 FSLFWLLE 9
FS+FW+ E
Sbjct: 36 FSIFWMKE 43


>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 SFSLFWLL 8
SFSLF+LL
Sbjct: 154 SFSLFYLL 161


>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)

Query: 1 SFSLFWLL 8
SFSLF+LL
Sbjct: 154 SFSLFYLL 161


>sp|L_OLVVA|RNA-DIRECTED RNA polymerase L|Oliveros mammarenavirus (isolate

Query: 3 SLFWLLEP 10
+LFWL++P
Sbjct: 1729 NLFWLVKP 1736


>sp|L_LATVB|RNA-DIRECTED RNA polymerase L|Latino mammarenavirus (isolate Rat/Bolivia/MARU

Query: 3 SLFWLLEP 10
+LFWL++P
Sbjct: 1733 NLFWLVKP 1740


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 2 FSLFW 6
FSLFW
Sbjct: 2375 FSLFW 2379




22|Sequence|106|115|WLLEPRIEIV

>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 1 WLLEPRIE 8
W L+P+IE
Sbjct: 276 WTLDPKIE 283


>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1 WLLEPRIE 8
W L+P+IE
Sbjct: 276 WTLDPKIE 283


>sp|LH3_ADES1|HEXON-INTERLACING protein LH3|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 WLLEPRIEI 9
W ++PRI I
Sbjct: 126 WCIDPRITI 134


>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)

Query: 1 WLLEPRIE 8
W L+P+IE
Sbjct: 276 WTLDPKIE 283


>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1 WLLEPRIE 8
W L+P+IE
Sbjct: 276 WTLDPKIE 283


>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 1 WLLEPRIE 8
W L+P+IE
Sbjct: 276 WTLDPKIE 283


>sp|L_OLVVA|RNA-DIRECTED RNA polymerase L|Oliveros mammarenavirus (isolate

Query: 1 WLLEPRI 7
WL++PR+
Sbjct: 1732 WLVKPRV 1738


>sp|L_LATVB|RNA-DIRECTED RNA polymerase L|Latino mammarenavirus (isolate Rat/Bolivia/MARU

Query: 1 WLLEPRI 7
WL++PR+
Sbjct: 1736 WLVKPRV 1742


>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|V018_FOWPN|PUTATIVE ankyrin repeat protein FPV018|Fowlpox virus (strain NVSL) (FPV)

Query: 1 WLLEPRIEIV 10
WLL P I V
Sbjct: 674 WLLSPEIHRV 683


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 WLLEPRIE 8
W ++P+IE
Sbjct: 276 WTVDPKIE 283


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101


>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain

Query: 1 WLLEPRIE 8
W ++P+IE
Sbjct: 276 WTVDPKIE 283


>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 WLLEPRIE 8
W ++P+IE
Sbjct: 276 WTVDPKIE 283




23|Sequence|111|120|RIEIVVVGTG

>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain

Query: 1 RIEIVVVGTG 10
++ I+V GTG
Sbjct: 303 QVPIIVTGTG 312




24|Sequence|116|125|VVGTGDRTER

>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)

Query: 1 VVGTGDRTER 10
V+ TG+RT R
Sbjct: 63 VINTGNRTNR 72


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 1 VVGTGDRTE 9
+VGTGD E
Sbjct: 1269 IVGTGDFAE 1277


>sp|ENV_FLVGL|ENVELOPE glycoprotein|Feline leukemia virus (strain A/Glasgow-1)

Query: 2 VGTGDR 7
+GTGDR
Sbjct: 284 IGTGDR 289


>sp|ENV_FLVCA|ENVELOPE glycoprotein|Feline leukemia virus (strain C/FA27)

Query: 2 VGTGDR 7
+GTGDR
Sbjct: 244 IGTGDR 249


>sp|ENV_FLVSA|ENVELOPE glycoprotein|Feline leukemia virus (strain C/Sarma)

Query: 2 VGTGDR 7
+GTGDR
Sbjct: 281 IGTGDR 286


>sp|ENV_FSVGA|ENVELOPE glycoprotein|Feline sarcoma virus (strain Gardner-Arnstein)

Query: 2 VGTGDR 7
+GTGDR
Sbjct: 304 IGTGDR 309


>sp|ENV_FLVCS|ENVELOPE glycoprotein|Feline leukemia virus (strain C/FS246)

Query: 2 VGTGDR 7
+GTGDR
Sbjct: 254 IGTGDR 259


>sp|TAPFS_BPMU|PROBABLE tail assembly protein FS-gp41|Escherichia phage Mu (Bacteriophage

Query: 3 GTGDRTE 9
GTGD TE
Sbjct: 35 GTGDETE 41


>sp|POLG_CILVC|RNA replication protein|Citrus leprosis virus C (isolate

Query: 1 VVGTGDRTER 10
+VG GD T +
Sbjct: 1368 IVGVGDETTK 1377




25|Sequence|121|130|DRTERLQSQV

***** No hits found ******


26|Sequence|126|135|LQSQVLQAMR

***** No hits found ******


27|Sequence|131|140|LQAMRQRGIA

>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 1 LQAMRQRGIA 10
++AMR+ G+A
Sbjct: 1913 IEAMRKSGVA 1922




28|Sequence|136|145|QRGIAVEVQD

***** No hits found ******


29|Sequence|141|150|VEVQDTPNAC

>sp|Y077_OSHVF|UNCHARACTERIZED protein ORF77|Ostreid herpesvirus 1 (isolate France)

Query: 1 VEVQDTPNAC 10
+E +D P AC
Sbjct: 747 IECKDIPTAC 756


>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 1 VEVQDTPN 8
VE+ D PN
Sbjct: 508 VEISDNPN 515


>sp|GP_TSWVR|ENVELOPMENT polyprotein|Tomato spotted wilt virus (strain

Query: 1 VEVQDTPNAC 10
+ V D PN C
Sbjct: 105 ISVSDLPNNC 114


>sp|GP_TSWV|ENVELOPMENT polyprotein|Tomato spotted wilt virus (TSWV)

Query: 1 VEVQDTPNAC 10
+ V D PN C
Sbjct: 105 ISVSDLPNNC 114




30|Sequence|146|155|TPNACATFNF

>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)

Query: 2 PNACATFN 9
PN C TFN
Sbjct: 86 PNCCRTFN 93


>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)

Query: 2 PNACATFN 9
PN C TFN
Sbjct: 86 PNCCRTFN 93


>sp|PG094_VACCW|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Western Reserve)

Query: 2 PNACATFN 9
PN C TFN
Sbjct: 86 PNCCRTFN 93


>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)

Query: 2 PNACATFN 9
PN C TFN
Sbjct: 86 PNCCRTFN 93


>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 PNACATFN 9
PN C TFN
Sbjct: 86 PNCCRTFN 93


>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus

Query: 2 PNACATFN 9
PN C TFN
Sbjct: 86 PNCCHTFN 93


>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate

Query: 2 PNACATFN 9
PN C TFN
Sbjct: 86 PNCCHTFN 93


>sp|MVP_BCMNN|P3N-PIPO polyprotein|Bean common mosaic necrosis virus

Query: 1 TPNACATFNF 10
TP C +NF
Sbjct: 989 TPRKCTYYNF 998


>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 TPNACATFNF 10
TP A ATF F
Sbjct: 327 TPQAVATFKF 336


>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 TPNACATFNF 10
TP A ATF F
Sbjct: 326 TPQAVATFKF 335


>sp|YR367_MIMIV|UNCHARACTERIZED protein R367|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 CATFNF 10
C TFNF
Sbjct: 422 CTTFNF 427


>sp|UL87_ELHVK|PROTEIN U58|Elephantid herpesvirus 1 (isolate Asian

Query: 1 TPNACATFNF 10
T +C TFNF
Sbjct: 466 TAPSCLTFNF 475




31|Sequence|151|160|ATFNFLCHEG

>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 TFNFLCHEG 10
T+NFL H+G
Sbjct: 77 TYNFLKHKG 85


>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 TFNFLCHEG 10
T+NFL H+G
Sbjct: 77 TYNFLKHKG 85


>sp|36013_ASFK5|PROTEIN MGF 360-13L|African swine fever virus (isolate

Query: 3 FNFLCH 8
+NFLCH
Sbjct: 302 YNFLCH 307


>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 FNFLCHE 9
FNF+C E
Sbjct: 1719 FNFVCRE 1725


>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 FNFLCHE 9
FNF+C E
Sbjct: 1719 FNFVCKE 1725


>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 FNFLCHE 9
FNF+C E
Sbjct: 1719 FNFVCKE 1725


>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus

Query: 5 FLCHE 9
FLCHE
Sbjct: 227 FLCHE 231


>sp|VG04_ICHVA|UNCHARACTERIZED protein ORF4|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 FNFLCHEG 10
F F+CH G
Sbjct: 20 FRFVCHCG 27


>sp|MVP_BCMNN|P3N-PIPO polyprotein|Bean common mosaic necrosis virus

Query: 5 FLCHE 9
FLCHE
Sbjct: 227 FLCHE 231


>sp|VP87_NPVOP|CAPSID protein p87|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 3 FNFLC 7
FNFLC
Sbjct: 549 FNFLC 553


>sp|VP80_NPVAC|CAPSID-ASSOCIATED protein VP80|Autographa californica nuclear polyhedrosis virus

Query: 3 FNFLC 7
FNFLC
Sbjct: 616 FNFLC 620


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 FNFLCHE 9
FNF+C E
Sbjct: 1719 FNFVCGE 1725


>sp|EXON_IIV6|PUTATIVE exonuclease 012L|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 FNFLCHEG 10
FNF C++G
Sbjct: 120 FNFDCNKG 127


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 ATFNFL 6
ATFNFL
Sbjct: 664 ATFNFL 669


>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)

Query: 5 FLCHEG 10
++CHEG
Sbjct: 650 YMCHEG 655


>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 3 FNFLCHEG 10
+NF+ H+G
Sbjct: 1584 YNFVSHDG 1591


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related

Query: 1 ATFNFL 6
ATFNFL
Sbjct: 664 ATFNFL 669


>sp|V143_NPVOP|ATP-DEPENDENT DNA helicase P143|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 ATFNFLC 7
ATFN LC
Sbjct: 429 ATFNSLC 435


>sp|IKBF2_MDBVW|I-KAPPA-B like protein F2|Microplitis demolitor bracovirus (isolate Webb)

Query: 3 FNFLCHEG 10
+FLC EG
Sbjct: 21 LHFLCREG 28


>sp|IKBI1_MDBVW|I-KAPPA-B like protein I1|Microplitis demolitor bracovirus (isolate Webb)

Query: 3 FNFLCHEG 10
+FLC EG
Sbjct: 21 LHFLCREG 28




32|Sequence|156|165|LCHEGRVTGA

>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)

Query: 1 LCHEGRVT 8
+CHEG+ T
Sbjct: 651 MCHEGKQT 658


>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)

Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 119 HEGKVTG 125


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 119 HEGKVTG 125


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 118 HEGKVTG 124


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 118 HEGKVTG 124


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 125 HEGKVTG 131


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 119 HEGKVTG 125


>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 125 HEGKVTG 131


>sp|HEMA_CVPV|HEMAGGLUTININ-ESTERASE coronavirus (PV) (Puffinosis virus)

Query: 1 LCHEGRVTG 9
LCH G+++
Sbjct: 69 LCHSGKISA 77


>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)

Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 116 HEGKVTG 122


>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 3 HEGRVTG 9
HEG++TG
Sbjct: 118 HEGKITG 124


>sp|SPIKE_CVRSD|SPIKE glycoprotein|Rat coronavirus (strain 681) (RCV-SDAV)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 672 CYSGRVSAA 680


>sp|SPIKE_CVMJH|SPIKE glycoprotein|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 544 CYSGRVSAA 552


>sp|SPIKE_CVMJC|SPIKE glycoprotein|Murine coronavirus (strain JHMV /

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 685 CYSGRVSAA 693


>sp|SPIKE_CVMA5|SPIKE glycoprotein|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 633 CYSGRVSAA 641


>sp|SPIKE_CVM4|SPIKE glycoprotein|Murine coronavirus (strain 4) (MHV-4)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 685 CYSGRVSAA 693


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 674 CYSGRVSAA 682


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 672 CYSGRVSAA 680


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 672 CYSGRVSAA 680


>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 684 CYSGRVSAA 692


>sp|SPIKE_CVBQ|SPIKE glycoprotein|Bovine coronavirus (strain Quebec) (BCoV)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 684 CYSGRVSAA 692


>sp|SPIKE_CVBOK|SPIKE glycoprotein|Bovine coronavirus (strain OK-0514) (BCoV)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 684 CYSGRVSAA 692


>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 684 CYSGRVSAA 692


>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 684 CYSGRVSAA 692


>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 684 CYSGRVSAA 692


>sp|SPIKE_CVBLS|SPIKE glycoprotein|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 684 CYSGRVSAA 692


>sp|SPIKE_CVBL9|SPIKE glycoprotein|Bovine coronavirus (strain L9) (BCoV)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 684 CYSGRVSAA 692


>sp|SPIKE_CVBF|SPIKE glycoprotein|Bovine coronavirus (strain F15) (BCoV)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 684 CYSGRVSAA 692


>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 684 CYSGRVSAA 692


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1 LCHEGR 6
+CHEG+
Sbjct: 1063 ICHEGK 1068


>sp|SPIKE_BCRP3|SPIKE glycoprotein|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 LCHEGR 6
+CHEG+
Sbjct: 1049 ICHEGK 1054


>sp|SPIKE_BCHK3|SPIKE glycoprotein|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 LCHEGR 6
+CHEG+
Sbjct: 1050 ICHEGK 1055


>sp|SPIKE_BC279|SPIKE glycoprotein|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 LCHEGR 6
+CHEG+
Sbjct: 1049 ICHEGK 1054


>sp|POL2_GFLVN|RNA2 polyprotein|Grapevine fanleaf virus (isolate NW)

Query: 2 CHEGRVTGA 10
C +GR TG
Sbjct: 258 CADGRTTGG 266


>sp|CVC2_PSHV1|CAPSID vertex component 2|Psittacid herpesvirus 1 (isolate Amazon

Query: 4 EGRVTG 9
EGRVTG
Sbjct: 439 EGRVTG 444


>sp|POL2_ARMVN|RNA2 polyprotein|Arabis mosaic virus (isolate NW)

Query: 2 CHEGRVTGA 10
C +GR TG
Sbjct: 259 CADGRTTGG 267


>sp|POL2_ARMVS|RNA2 polyprotein|Arabis mosaic virus (isolate Syrah)

Query: 2 CHEGRVTGA 10
C +GR TG
Sbjct: 280 CADGRTTGG 288


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2 CHEGRVTG 9
C+ GR TG
Sbjct: 3367 CYNGRPTG 3374


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 CHEGRVTG 9
C+ GR TG
Sbjct: 3458 CYNGRPTG 3465


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 CHEGRVTG 9
C+ GR TG
Sbjct: 3367 CYNGRPTG 3374


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 CHEGRVTG 9
C+ GR TG
Sbjct: 3458 CYNGRPTG 3465


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LCHEGRVT 8
LC EG++T
Sbjct: 339 LCIEGKIT 346


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LCHEGRVT 8
LC EG++T
Sbjct: 339 LCIEGKIT 346


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LCHEGRVT 8
LC EG++T
Sbjct: 339 LCIEGKIT 346


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LCHEGRVT 8
LC EG++T
Sbjct: 339 LCIEGKIT 346


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LCHEGRVT 8
LC EG++T
Sbjct: 339 LCIEGKIT 346


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 LCHEGRVTG 9
L H GR+TG
Sbjct: 939 LLHLGRLTG 947




33|Sequence|161|170|RVTGAALIPP

>sp|Y9KD_BPBF2|UNCHARACTERIZED 9.2 kDa protein|Escherichia phage Bf23 (Enterobacteria phage

Query: 1 RVTGAALIP 9
R+ GAALIP
Sbjct: 31 RIKGAALIP 39


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 2 VTGAALIP 9
VTG AL+P
Sbjct: 592 VTGRALLP 599




34|Sequence|166|175|ALIPPPGGTS

>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV

Query: 1 ALIPPPGGTS 10
A +PP GG S
Sbjct: 323 AFLPPEGGAS 332


>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16

Query: 1 ALIPPPGGT 9
L PPPGGT
Sbjct: 405 GLQPPPGGT 413


>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64

Query: 1 ALIPPPGGT 9
L PPP GT
Sbjct: 92 GLTPPPSGT 100


>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35

Query: 1 ALIPPPGGT 9
L PPP GT
Sbjct: 403 GLTPPPSGT 411


>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34

Query: 1 ALIPPPGGT 9
L PPP GT
Sbjct: 430 GLTPPPSGT 438


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 LIPPPGGTS 10
L+ PGGTS
Sbjct: 5038 LLNKPGGTS 5046


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 2 LIPPPGGTS 10
L+ PGGTS
Sbjct: 5162 LLNKPGGTS 5170


>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13

Query: 1 ALIPPPGGT 9
L PPP GT
Sbjct: 400 GLSPPPNGT 408


>sp|RDRP_AQRVA|RNA-DIRECTED RNA polymerase VP2|Aquareovirus A (isolate Chum

Query: 3 IPPPGGTS 10
IPPPG T+
Sbjct: 186 IPPPGRTN 193


>sp|VL1_PCPV1|MAJOR capsid protein L1|Pygmy chimpanzee papillomavirus type 1

Query: 1 ALIPPPGGT 9
L PPP GT
Sbjct: 403 GLSPPPNGT 411


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 5 PPGGTS 10
PPGG+S
Sbjct: 454 PPGGSS 459


>sp|CAPSD_PCV2|CAPSID protein|Porcine circovirus 2 (PCV2)

Query: 2 LIPPPGGTS 10
+PP GGT+
Sbjct: 79 FVPPGGGTN 87


>sp|CAPSD_PCV1|CAPSID protein|Porcine circovirus 1 (PCV1)

Query: 2 LIPPPGGTS 10
+PP GGT+
Sbjct: 80 FLPPSGGTN 88




35|Sequence|171|184|PGGTSLTSLGQAAQ

>sp|L_MMVR|RNA-DIRECTED RNA polymerase L|Maize mosaic virus (isolate Maize/United

Query: 2 GGTSLTSLGQAA 13
GG+SLTS+ +A
Sbjct: 1367 GGSSLTSVDEAG 1378


>sp|CAPSD_CAMVS|CAPSID protein|Cauliflower mosaic virus (strain Strasbourg)

Query: 3 GTSLTSLGQAAQ 14
GTS+ SLG AA+
Sbjct: 308 GTSIYSLGFAAK 319


>sp|CAPSD_CAMVE|CAPSID protein|Cauliflower mosaic virus (strain BBC)

Query: 3 GTSLTSLGQAAQ 14
GTS+ SLG AA+
Sbjct: 307 GTSIYSLGFAAK 318


>sp|CAPSD_CAMVD|CAPSID protein|Cauliflower mosaic virus (strain D/H)

Query: 3 GTSLTSLGQAAQ 14
GTS+ SLG AA+
Sbjct: 308 GTSIYSLGFAAK 319


>sp|CAPSD_CAMVC|CAPSID protein|Cauliflower mosaic virus (strain CM-1841)

Query: 3 GTSLTSLGQAAQ 14
GTS+ SLG AA+
Sbjct: 307 GTSIYSLGFAAK 318


>sp|FIBER_BPSFV|TAIL spike protein|Shigella phage Sf6 (Shigella flexneri

Query: 1 PGGTSLTSLGQAAQ 14
PGG ++ +G+A+Q
Sbjct: 216 PGGVNIRGVGKASQ 229


>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1238 GGKSLTSIALATK 1250


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246


>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 1 PGGTSLTSLG 10
PGG S+T G
Sbjct: 295 PGGISMTVTG 304


>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 1 PGGTSLTSLG 10
PGG S+T G
Sbjct: 295 PGGISMTVTG 304


>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 1 PGGTSLTSLG 10
PGG S+T G
Sbjct: 295 PGGISMTVTG 304


>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 1 PGGTSLTSLG 10
PGG S+T G
Sbjct: 295 PGGISMTVTG 304


>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 1 PGGTSLTSLGQAAQ 14
P GT T +G+A
Sbjct: 1152 PSGTQKTVMGEAGH 1165


>sp|POL_IPMA|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 2 GGTSLTSLGQAAQ 14
GG SL+S +AAQ
Sbjct: 582 GGCSLSSPVEAAQ 594


>sp|CAPSD_BPS13|CAPSID protein F|Enterobacteria phage S13 (Bacteriophage S13)

Query: 3 GTSLTSLGQ 11
GT TSLGQ
Sbjct: 252 GTDQTSLGQ 260


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 2 GGTSLTSLG 10
GG SLT +G
Sbjct: 219 GGESLTGIG 227






THE END