1|Sequence|1|10|MATALALRSL
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 TALALRSL 10
TALALR++
Sbjct: 1761 TALALRTI 1768
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 MATALAL 7
MAT+LAL
Sbjct: 578 MATSLAL 584
2|Sequence|6|15|ALRSLYRARP
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 ALRSLYRARP 10
ALR LY+ P
Sbjct: 148 ALRKLYKMTP 157
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 3 RSLYRARP 10
RS+YR P
Sbjct: 230 RSMYRIPP 237
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 RSLYRARP 10
RS+YR P
Sbjct: 230 RSMYRIPP 237
>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 RSLYRARP 10
RS+YR P
Sbjct: 230 RSMYRIPP 237
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LRSLYRA 8
LRSLY A
Sbjct: 75 LRSLYNA 81
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 ALRSLYRARP 10
ALRS Y A P
Sbjct: 536 ALRSPYPAHP 545
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 SLYRARP 10
SLY +RP
Sbjct: 417 SLYTSRP 423
3|Sequence|11|20|YRARPSLRCP
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YRARPSLRCP 10
Y A P LR P
Sbjct: 346 YEANPELRLP 355
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YRARPSLRCP 10
Y A P LR P
Sbjct: 345 YEANPELRLP 354
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 YRARPSLRCP 10
+RA L+CP
Sbjct: 544 HRALVQLKCP 553
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 YRARPSLRCP 10
+RA L+CP
Sbjct: 544 HRALVQLKCP 553
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YRARPSLRC 9
YR S+RC
Sbjct: 467 YRELKSIRC 475
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YRARPSLRCP 10
Y A P LR P
Sbjct: 346 YEANPELRLP 355
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 YRARPSLR 8
YRARP +
Sbjct: 475 YRARPKFK 482
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 YRARPSLRCP 10
+RA ++CP
Sbjct: 514 HRAPQQIKCP 523
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 1 YRARPSLRC 9
YRAR L C
Sbjct: 85 YRARGLLLC 93
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 1 YRARPSLRC 9
YRAR L C
Sbjct: 85 YRARGLLLC 93
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 1 YRARPSLRC 9
YR S+RC
Sbjct: 466 YRKLKSVRC 474
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YRARPSLRC 9
YR S+RC
Sbjct: 467 YRELKSVRC 475
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 YRARPSLRCP 10
Y RP +R P
Sbjct: 836 YAPRPLIRTP 845
>sp|YHR1_HCMVA|UNCHARACTERIZED protein HHRF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RARPSLRCP 10
RARPSL P
Sbjct: 113 RARPSLYSP 121
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 1 YRARPSLRCP 10
+RA L+CP
Sbjct: 583 HRALLQLKCP 592
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 1 YRARPSLRCP 10
+RA L+CP
Sbjct: 561 HRALLQLKCP 570
>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RARPSLRCP 10
R RPS R P
Sbjct: 202 RWRPSFRSP 210
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 1 YRARPSLRCP 10
+RA L+CP
Sbjct: 564 HRALLQLKCP 573
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 YRARPSLRCP 10
+RA ++CP
Sbjct: 547 HRALVQIKCP 556
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 3 ARPSLRCP 10
A P RCP
Sbjct: 501 AHPGTRCP 508
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 YRARPSLR 8
+R+RPS R
Sbjct: 158 HRSRPSFR 165
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 YRARPSLR 8
+R+RPS R
Sbjct: 158 HRSRPSFR 165
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 YRARPSLR 8
+R+RPS R
Sbjct: 158 HRSRPSFR 165
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 3 ARPSLRCP 10
A P RCP
Sbjct: 501 AHPGTRCP 508
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 ARPSLRCP 10
A P RCP
Sbjct: 501 AHPGTRCP 508
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 3 ARPSLRCP 10
A P RCP
Sbjct: 501 AHPGTRCP 508
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 3 ARPSLRCP 10
A P RCP
Sbjct: 501 AHPGTRCP 508
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 3 ARPSLRCP 10
A P RCP
Sbjct: 501 AHPGTRCP 508
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 3 ARPSLRCP 10
A P RCP
Sbjct: 501 AHPGTRCP 508
>sp|ST_POVBA|SMALL t antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 4 RPSLRCP 10
+PS+ CP
Sbjct: 104 KPSVHCP 110
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 3 ARPSLRCP 10
A P RCP
Sbjct: 501 AHPGTRCP 508
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 YRARPSLRC 9
Y PS+RC
Sbjct: 258 YPRYPSVRC 266
>sp|ST_POVBK|SMALL t antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 4 RPSLRCP 10
+PS+ CP
Sbjct: 104 KPSVHCP 110
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 3 ARPSLRCP 10
A P RCP
Sbjct: 501 AHPGARCP 508
4|Sequence|16|25|SLRCPPVELP
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 1 SLRCPPVE 8
S +CPP+E
Sbjct: 73 SAKCPPIE 80
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 1 SLRCPPVE 8
S +CPP+E
Sbjct: 73 SAKCPPIE 80
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 1 SLRCPPVE 8
S +CPP+E
Sbjct: 70 SAKCPPIE 77
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 1 SLRCPPVE 8
S +CPP+E
Sbjct: 72 SAKCPPIE 79
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 1 SLRCPPVE 8
S +CPP+E
Sbjct: 70 SAKCPPIE 77
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 194 CPPIEL 199
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPIEL 190
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 183 CPPIEL 188
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPIEL 190
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 184 CPPIEL 189
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 3 RCPPVEL 9
+CPP+EL
Sbjct: 185 KCPPLEL 191
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 3 RCPPVEL 9
RCPP++L
Sbjct: 186 RCPPIKL 192
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPIEL 190
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 LRCPPVEL 9
L+CPP+ L
Sbjct: 550 LKCPPILL 557
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 2 LRCPPVEL 9
L+CPP+ L
Sbjct: 564 LKCPPILL 571
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPIEL 190
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 186 CPPIEL 191
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 214 CPPIEL 219
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 SLRCPPVELP 10
SLRCP + P
Sbjct: 750 SLRCPNLFFP 759
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 3 RCPPVEL 9
+CPP+EL
Sbjct: 185 KCPPLEL 191
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPIEL 190
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 3 RCPPVEL 9
+CPP+EL
Sbjct: 185 QCPPLEL 191
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 187 CPPIEL 192
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 186 CPPIEL 191
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 186 CPPIEL 191
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 187 CPPIEL 192
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 SLRCPPVEL 9
+L CPP++L
Sbjct: 881 ALFCPPIKL 889
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 SLRCPPVEL 9
+L CPP++L
Sbjct: 881 ALFCPPIKL 889
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 2 LRCPPVEL 9
L+CPP+ L
Sbjct: 550 LKCPPLLL 557
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 186 CPPIEL 191
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 2 LRCPPV 7
++CPPV
Sbjct: 539 IKCPPV 544
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 SLRCPPVELP 10
SLRCP P
Sbjct: 742 SLRCPNFFFP 751
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 3 RCPPVEL 9
+CPP++L
Sbjct: 183 KCPPIQL 189
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 186 CPPLEL 191
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 SLRCPPVELP 10
SLRCP P
Sbjct: 742 SLRCPNFFFP 751
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 2 LRCPPV 7
++CPPV
Sbjct: 538 IKCPPV 543
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 2 LRCPPV 7
L+CPP+
Sbjct: 550 LKCPPL 555
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 2 LRCPPV 7
L+CPP+
Sbjct: 556 LKCPPL 561
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 2 LRCPPV 7
L+CPP+
Sbjct: 557 LKCPPL 562
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 2 LRCPPV 7
L+CPP+
Sbjct: 537 LKCPPL 542
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 2 LRCPPV 7
+RCPP+
Sbjct: 543 VRCPPL 548
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 2 LRCPPV 7
L+CPP+
Sbjct: 556 LKCPPL 561
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 2 LRCPPV 7
L+CPP+
Sbjct: 543 LKCPPL 548
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 184 CPPLEL 189
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 184 CPPLEL 189
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 2 LRCPPV 7
L+CPP+
Sbjct: 589 LKCPPL 594
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 182 CPPLEL 187
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 212 CPPLEL 217
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 208 CPPLEL 213
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 181 CPPLEL 186
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 182 CPPLEL 187
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 184 CPPLEL 189
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 182 CPPLEL 187
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 2 LRCPPV 7
L+CPP+
Sbjct: 567 LKCPPL 572
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 2 LRCPPV 7
L+CPP+
Sbjct: 570 LKCPPL 575
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 215 CPPLEL 220
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 182 CPPLEL 187
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 2 LRCPPV 7
++CPP+
Sbjct: 559 IKCPPI 564
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 184 CPPLEL 189
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 181 CPPLEL 186
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 181 CPPLEL 186
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 211 CPPLEL 216
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 2 LRCPPVEL 9
++CPP+ L
Sbjct: 556 IKCPPLLL 563
>sp|A53_VACCC|TRUNCATED secreted TNF-receptor-like protein A53|Vaccinia virus (strain
Query: 3 RCPPVEL 9
RCPP E
Sbjct: 53 RCPPGEF 59
Query: 3 RCPP 6
RCPP
Sbjct: 74 RCPP 77
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 183 CPPLEL 188
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 186 CPPLEL 191
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 192 CPPLEL 197
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 2 LRCPPVEL 9
++CPP+ L
Sbjct: 553 IKCPPLIL 560
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 2 LRCPPV 7
L+CPP+
Sbjct: 551 LKCPPL 556
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 2 LRCPPV 7
L+CPP+
Sbjct: 551 LKCPPL 556
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 2 LRCPPV 7
++CPP+
Sbjct: 554 MKCPPL 559
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 LRCPPVEL 9
++CPP+ L
Sbjct: 557 IKCPPLLL 564
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 184 CPPLEL 189
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 2 LRCPPV 7
L+CPP+
Sbjct: 568 LKCPPL 573
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 183 CPPLEL 188
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 182 CPPLEL 187
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 185 CPPLEL 190
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 2 LRCPPV 7
++CPP+
Sbjct: 558 IKCPPL 563
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 2 LRCPPV 7
++CPP+
Sbjct: 558 IKCPPL 563
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 2 LRCPPV 7
++CPP+
Sbjct: 526 IKCPPL 531
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 2 LRCPPV 7
++CPP+
Sbjct: 555 IKCPPL 560
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 2 LRCPPV 7
++CPP+
Sbjct: 520 IKCPPL 525
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 2 LRCPPV 7
++CPP+
Sbjct: 558 IKCPPL 563
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 2 LRCPPVEL 9
+ C PVEL
Sbjct: 967 VNCEPVEL 974
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 212 CPPLEL 217
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 182 CPPLEL 187
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 2 LRCPPV 7
++CPP+
Sbjct: 551 IKCPPM 556
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 2 LRCPPV 7
++CPP+
Sbjct: 552 IKCPPL 557
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 212 CPPLEL 217
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 2 LRCPPV 7
++CPP+
Sbjct: 555 IKCPPL 560
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 4 CPPVEL 9
CPP++L
Sbjct: 187 CPPIKL 192
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 2 LRCPPV 7
++CPP+
Sbjct: 551 VKCPPL 556
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 4 CPPVE 8
CPP++
Sbjct: 1625 CPPIQ 1629
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 4 CPPVEL 9
CPP+EL
Sbjct: 246 CPPLEL 251
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 LRCPP 6
L CPP
Sbjct: 15 LNCPP 19
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 2 LRCPPV 7
++CPP+
Sbjct: 550 VKCPPL 555
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 2 LRCPPV 7
++CPP+
Sbjct: 551 IKCPPL 556
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 2 LRCPPV 7
++CPP+
Sbjct: 558 VKCPPL 563
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 5 PPVELP 10
PP+++P
Sbjct: 373 PPIDIP 378
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 5 PPVELP 10
PP+++P
Sbjct: 372 PPIDIP 377
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 5 PPVELP 10
PP+++P
Sbjct: 372 PPIDIP 377
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 5 PPVELP 10
PP+++P
Sbjct: 373 PPIDIP 378
>sp|VE2_HPV23|REGULATORY protein E2|Human papillomavirus 23
Query: 1 SLRCPPVE 8
++R PPV+
Sbjct: 101 TIRSPPVD 108
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 5 PPVELP 10
PP+++P
Sbjct: 372 PPIDIP 377
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 5 PPVELP 10
PP+++P
Sbjct: 372 PPIDIP 377
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 4 CPPVEL 9
CPP+E
Sbjct: 184 CPPLEF 189
5|Sequence|21|30|PVELPWAPRR
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 PVELPWAP 8
PVELPW P
Sbjct: 1829 PVELPWEP 1836
Query: 2 VELPWAP 8
VE PWAP
Sbjct: 1806 VEFPWAP 1812
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 PVELPWAP 8
PVELPW P
Sbjct: 1806 PVELPWEP 1813
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 PVELPWAP 8
PVELPW P
Sbjct: 1806 PVELPWEP 1813
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 PVELPWAP 8
PVELPW P
Sbjct: 498 PVELPWEP 505
Query: 2 VELPWAP 8
VE PWAP
Sbjct: 475 VEFPWAP 481
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 PVELPWAP 8
PV PW P
Sbjct: 971 PVSTPWTP 978
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VELPWAPR 9
++LPW PR
Sbjct: 145 LQLPWVPR 152
>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VELPWAPR 9
++LPW PR
Sbjct: 145 LQLPWVPR 152
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 PWAPR 9
PWAPR
Sbjct: 18 PWAPR 22
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 1 PVELPWAP 8
P+ + WAP
Sbjct: 444 PMTIKWAP 451
>sp|VE4_HPV18|PROTEIN E4|Human papillomavirus type 18
Query: 1 PVELPWAPRR 10
P PWAP+R
Sbjct: 29 PAPCPWAPQR 38
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 VELPWAP 8
+EL WAP
Sbjct: 9 LELHWAP 15
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 VELPWAP 8
+EL WAP
Sbjct: 9 LELHWAP 15
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 1 PVELPWAPRR 10
PVE+P P R
Sbjct: 84 PVEIPLQPTR 93
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PVELPWAPRR 10
P+E PW P +
Sbjct: 777 PMEGPWVPEQ 786
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PVELPWAPRR 10
P+E PW P +
Sbjct: 768 PMEGPWVPEQ 777
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 ELPWA 7
E+PWA
Sbjct: 1067 EVPWA 1071
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 ELPWA 7
E+PWA
Sbjct: 1067 EVPWA 1071
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PVELPWAPRR 10
P+E PW P +
Sbjct: 758 PMEGPWVPEQ 767
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 5 PWAPR 9
PW PR
Sbjct: 18 PWTPR 22
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 3 ELPWAPR 9
ELP APR
Sbjct: 366 ELPAAPR 372
>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)
Query: 1 PVELPW 6
P+EL W
Sbjct: 115 PLELKW 120
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 5 PWAPR 9
PW PR
Sbjct: 18 PWTPR 22
>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PVELPW 6
P+EL W
Sbjct: 115 PMELKW 120
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 VELPW 6
VELPW
Sbjct: 1779 VELPW 1783
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 6 WAPR 9
WAPR
Sbjct: 817 WAPR 820
6|Sequence|26|35|WAPRRGHRLS
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 PRRGHR 8
PRRGH+
Sbjct: 1130 PRRGHK 1135
>sp|VE4_HPV16|PROTEIN E4|Human papillomavirus type 16
Query: 1 WAPRRGHRLS 10
WAP++ RLS
Sbjct: 34 WAPKKHRRLS 43
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 WAPRRGHR 8
W PR HR
Sbjct: 587 WVPRVTHR 594
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 APRRGHRLS 10
A RRG RLS
Sbjct: 1490 AKRRGTRLS 1498
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 APRRGHRLS 10
A RRG RLS
Sbjct: 1491 AKRRGTRLS 1499
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 3 PRRGH 7
PRRGH
Sbjct: 292 PRRGH 296
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 WAPRRG 6
W+PR G
Sbjct: 1221 WSPREG 1226
>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57
Query: 3 PRRGH 7
PRRGH
Sbjct: 101 PRRGH 105
>sp|E3145_ADE05|EARLY E3 14.5 kDa protein|Human adenovirus C serotype 5
Query: 6 GHRLS 10
GHRLS
Sbjct: 65 GHRLS 69
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 1 WAPRRGHR 8
W+ RGH+
Sbjct: 424 WSTSRGHK 431
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 WAPRRGHRL 9
+ RGHRL
Sbjct: 1017 FVTERGHRL 1025
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 WAPRRGHRL 9
+ RGHRL
Sbjct: 1017 FVTERGHRL 1025
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 2 APRRGHRL 9
APR G RL
Sbjct: 336 APRTGRRL 343
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 2 APRRGHRL 9
APR G RL
Sbjct: 335 APRTGRRL 342
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 4 RRGHRL 9
RRGH L
Sbjct: 723 RRGHSL 728
7|Sequence|31|40|GHRLSPADDE
>sp|YVBF_VACCC|UNCHARACTERIZED 8.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GHRLSPAD 8
GH +SP D
Sbjct: 38 GHTISPVD 45
>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 GHRLSP 6
GHR+SP
Sbjct: 126 GHRISP 131
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 GHRLSP 6
GHR+SP
Sbjct: 126 GHRVSP 131
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 2 HRLSPADD 9
HRL+ AD+
Sbjct: 841 HRLTKADE 848
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 2 HRLSPADD 9
HRL+ AD+
Sbjct: 855 HRLTKADE 862
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 2 HRLSPADD 9
HRL+ AD+
Sbjct: 840 HRLTKADE 847
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 GHRLSP 6
GHR+SP
Sbjct: 126 GHRVSP 131
>sp|VIF_HV1V9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 GHRLSPADD 9
GHR+SP D
Sbjct: 126 GHRVSPICD 134
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 HRLSPADDE 10
HRL PA E
Sbjct: 2640 HRLEPAKCE 2648
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 4 LSPADDE 10
LSP+DDE
Sbjct: 177 LSPSDDE 183
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 HRLSPADDE 10
HR PA++E
Sbjct: 729 HRGQPANEE 737
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 HRLSPADDE 10
HRL PA E
Sbjct: 2640 HRLEPAKCE 2648
>sp|VE7_HPV65|PROTEIN E7|Human papillomavirus 65
Query: 4 LSPADDE 10
L P+DDE
Sbjct: 30 LQPSDDE 36
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 3 RLSPAD 8
RLSPAD
Sbjct: 229 RLSPAD 234
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 HRLSPADD 9
HRL+ AD+
Sbjct: 841 HRLTKADE 848
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 HRLSPADD 9
HRL+ AD+
Sbjct: 840 HRLTKADE 847
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 HRLSPADD 9
HRL+ AD+
Sbjct: 855 HRLTKADE 862
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 2 HRLSPADDE 10
H+L+P D++
Sbjct: 380 HQLNPKDND 388
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 2 HRLSPADDE 10
H+L+P D++
Sbjct: 380 HQLNPKDND 388
>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 GHRLSP 6
GHR+SP
Sbjct: 127 GHRVSP 132
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 2 HRLSPADD 9
HR S +DD
Sbjct: 9 HRFSTSDD 16
>sp|SCP_HHV8P|SMALL capsomere-interacting protein|Human herpesvirus 8 type P
Query: 2 HRLSPADD 9
H LSPA D
Sbjct: 135 HSLSPASD 142
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GHRLSP 6
GH+LSP
Sbjct: 397 GHKLSP 402
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GHRLSP 6
GH+LSP
Sbjct: 397 GHKLSP 402
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 2 HRLSPAD 8
HRLSP++
Sbjct: 248 HRLSPSN 254
>sp|P30II_HTL1A|ACCESSORY protein p30II|Human T-cell leukemia virus 1
Query: 2 HRLSPADDE 10
HR SPAD +
Sbjct: 144 HRNSPADTK 152
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 2 HRLSPAD 8
HRLSP++
Sbjct: 248 HRLSPSN 254
>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 GHRLSP 6
GHR+SP
Sbjct: 126 GHRVSP 131
>sp|PG170_VAR67|PROTEIN OPG170|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 GHRLSPAD 8
G+RL P D
Sbjct: 145 GNRLKPRD 152
>sp|PG170_VACCC|PROTEIN OPG170|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GHRLSPAD 8
G+RL P D
Sbjct: 145 GNRLKPRD 152
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 4 LSPADD 9
L PADD
Sbjct: 1107 LEPADD 1112
>sp|PAX_I03A2|PROTEIN PA-X|Influenza A virus (strain A/wyoming/03/2003
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|UL129_HCMVA|UNCHARACTERIZED protein UL129|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GHRLSPADDE 10
HRLSP+ +
Sbjct: 11 SHRLSPSRAQ 20
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 GHRLSP 6
GH++SP
Sbjct: 126 GHKISP 131
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 1 GHRLSPADD 9
G LSP DD
Sbjct: 605 GSPLSPTDD 613
>sp|NS1_INBHT|NON-STRUCTURAL protein 1|Influenza B virus (strain B/HT/1984)
Query: 2 HRLSPAD 8
HRLSP +
Sbjct: 272 HRLSPEE 278
>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)
Query: 2 HRLSPAD 8
HRLSP +
Sbjct: 272 HRLSPEE 278
>sp|PAX_I73A4|PROTEIN PA-X|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GHR--LSPADD 9
GH L PADD
Sbjct: 1008 GHEIFLGPADD 1018
>sp|PAX_I18A0|PROTEIN PA-X|Influenza A virus (strain A/Brevig
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|PAX_I09A0|PROTEIN PA-X|Influenza A virus (strain swl
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 LSPADD 9
L PADD
Sbjct: 1017 LGPADD 1022
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|PAX_I82A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Hong
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|PAX_I02A1|PROTEIN PA-X|Influenza A virus (strain A/Guinea
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 LSPADD 9
L PADD
Sbjct: 1016 LGPADD 1021
>sp|NS1_INBPA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/PA/1979)
Query: 2 HRLSPADDE 10
HRLSP + +
Sbjct: 272 HRLSPEEGD 280
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|PAX_I02A5|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|PAX_I04A1|PROTEIN PA-X|Influenza A virus (strain A/Vietnam/1203/2004
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|PAX_I02A6|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|PAX_I00A0|PROTEIN PA-X|Influenza A virus (strain A/Duck/Hong
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 LSPADD 9
L PADD
Sbjct: 1010 LGPADD 1015
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 LSPADD 9
L PADD
Sbjct: 1017 LGPADD 1022
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 4 LSPADD 9
L PADD
Sbjct: 1016 LGPADD 1021
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 LSPADD 9
L+PADD
Sbjct: 786 LNPADD 791
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 4 LSPADD 9
L+PADD
Sbjct: 779 LNPADD 784
>sp|PAX_I02A4|PROTEIN PA-X|Influenza A virus (strain A/Silky
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|PAX_I02A2|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 LSPADD 9
L+PADD
Sbjct: 786 LNPADD 791
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 LSPADD 9
L+PADD
Sbjct: 786 LNPADD 791
>sp|PAX_I78A3|PROTEIN PA-X|Influenza A virus (strain A/Mallard/New
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 4 LSPADD 9
L+PADD
Sbjct: 783 LNPADD 788
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 4 LSPADD 9
L+PADD
Sbjct: 786 LNPADD 791
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 LSPADD 9
L PADD
Sbjct: 1013 LGPADD 1018
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 LSPADD 9
L PADD
Sbjct: 1014 LGPADD 1019
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 LSPADD 9
L PADD
Sbjct: 1018 LGPADD 1023
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 4 LSPADD 9
L PADD
Sbjct: 1017 LGPADD 1022
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 LSPADD 9
L PADD
Sbjct: 1020 LGPADD 1025
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 LSPADD 9
L PADD
Sbjct: 1013 LGPADD 1018
>sp|PAX_I85A3|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|PAX_I78A9|PROTEIN PA-X|Influenza A virus (strain A/Swine/Hong
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|PAX_I59A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|PAX_I02A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|PAX_I01A3|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 4 LSPADD 9
L+PADD
Sbjct: 783 LNPADD 788
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 4 LSPADD 9
L+PADD
Sbjct: 786 LNPADD 791
>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 HRLSPADDE 10
HRLSP + +
Sbjct: 272 HRLSPEEGD 280
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 4 LSPADD 9
L+PADD
Sbjct: 773 LNPADD 778
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 4 LSPADD 9
L+PADD
Sbjct: 783 LNPADD 788
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 LSPADD 9
L+PADD
Sbjct: 779 LNPADD 784
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 4 LSPADD 9
L+PADD
Sbjct: 779 LNPADD 784
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 LSPADD 9
L PADD
Sbjct: 1018 LGPADD 1023
>sp|PAX_I80A2|PROTEIN PA-X|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|PAX_I05A1|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 HRLSPA 7
HR SPA
Sbjct: 220 HRTSPA 225
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 4 LSPADD 9
L+PADD
Sbjct: 773 LNPADD 778
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 4 LSPADD 9
L+PADD
Sbjct: 773 LNPADD 778
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 4 LSPADD 9
L+PADD
Sbjct: 786 LNPADD 791
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 4 LSPADD 9
L+PADD
Sbjct: 773 LNPADD 778
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 4 LSPADD 9
L+PADD
Sbjct: 773 LNPADD 778
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 4 LSPADD 9
L+PADD
Sbjct: 783 LNPADD 788
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|NS1_INBYA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 2 HRLSPADDE 10
HRLSP + +
Sbjct: 272 HRLSPEEGD 280
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 4 LSPADD 9
L+PADD
Sbjct: 783 LNPADD 788
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 4 LSPADD 9
L+PADD
Sbjct: 783 LNPADD 788
>sp|NS1_INBSJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/1964)
Query: 2 HRLSPADDE 10
HRLSP + +
Sbjct: 272 HRLSPEEGD 280
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 4 LSPADD 9
L+PADD
Sbjct: 773 LNPADD 778
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 LSPADD 9
L+PADD
Sbjct: 784 LNPADD 789
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 2 HRLSPADDE 10
HRLSP + +
Sbjct: 272 HRLSPEEGD 280
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 2 HRLSPADDE 10
HRLSP + +
Sbjct: 272 HRLSPEEGD 280
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 4 LSPADD 9
L+PADD
Sbjct: 783 LNPADD 788
>sp|NS1_INBVJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Victoria/1987)
Query: 2 HRLSPADDE 10
HRLSP + +
Sbjct: 272 HRLSPEEGD 280
>sp|NS1_INBMD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Maryland/1959)
Query: 2 HRLSPADDE 10
HRLSP + +
Sbjct: 272 HRLSPEEGD 280
>sp|NS1_INBAD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 2 HRLSPADDE 10
HRLSP + +
Sbjct: 272 HRLSPEEGD 280
>sp|NS1_INBAC|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 2 HRLSPADDE 10
HRLSP + +
Sbjct: 272 HRLSPEEGD 280
>sp|NS1_INBRU|NON-STRUCTURAL protein 1|Influenza B virus (strain B/RU/1969)
Query: 2 HRLSPADDE 10
HRLSP + +
Sbjct: 272 HRLSPEEGD 280
>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)
Query: 2 HRLSPADDE 10
HRLSP + +
Sbjct: 272 HRLSPEEGD 280
8|Sequence|36|45|PADDELYQRT
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 4 DELYQR 9
DELYQ+
Sbjct: 188 DELYQK 193
>sp|E1A_ADE12|EARLY E1A protein|Human adenovirus A serotype 12
Query: 1 PADDELY 7
P+DD+LY
Sbjct: 31 PSDDDLY 37
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PADDELY 7
P DDEL+
Sbjct: 1176 PEDDELF 1182
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PADDELY 7
P DDEL+
Sbjct: 1181 PEDDELF 1187
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 5 ELYQRT 10
ELY+RT
Sbjct: 2532 ELYKRT 2537
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 5 ELYQRT 10
ELY+RT
Sbjct: 2531 ELYKRT 2536
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 ELYQRT 10
ELY+RT
Sbjct: 2531 ELYKRT 2536
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 5 ELYQRT 10
ELY+RT
Sbjct: 2531 ELYKRT 2536
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 5 ELYQRT 10
ELY+RT
Sbjct: 2532 ELYKRT 2537
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 ELYQRT 10
ELY+RT
Sbjct: 2531 ELYKRT 2536
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 5 ELYQRT 10
ELY+RT
Sbjct: 2531 ELYKRT 2536
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 5 ELYQRT 10
ELY+RT
Sbjct: 2531 ELYKRT 2536
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 3 DDELY 7
DDELY
Sbjct: 177 DDELY 181
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 3 DDELY 7
DDELY
Sbjct: 177 DDELY 181
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 3 DDELY 7
DDELY
Sbjct: 177 DDELY 181
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 3 DDELY 7
DDELY
Sbjct: 177 DDELY 181
>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 3 DDELY 7
DDELY
Sbjct: 177 DDELY 181
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PADDELYQRT 10
P D ELY T
Sbjct: 475 PKDKELYPLT 484
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PADDELYQRT 10
P D ELY T
Sbjct: 475 PKDKELYPLT 484
>sp|TAT_HV2ST|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 PADDELYQ 8
P D+ LYQ
Sbjct: 35 PGDEILYQ 42
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PADDELYQRT 10
P D ELY T
Sbjct: 478 PIDKELYPLT 487
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PADDELYQRT 10
P D ELY T
Sbjct: 480 PIDKELYPLT 489
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PADDELYQ 8
PA+ ++YQ
Sbjct: 997 PANSDVYQ 1004
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PADDELYQRT 10
P D ELY T
Sbjct: 482 PIDKELYPLT 491
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PADDELYQRT 10
P D ELY T
Sbjct: 478 PIDKELYPLT 487
9|Sequence|41|50|LYQRTRISLL
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 2 YQRTR 6
YQRTR
Sbjct: 148 YQRTR 152
10|Sequence|46|55|RISLLQREAA
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 RISLLQREA 9
+ SLLQ+EA
Sbjct: 1385 KTSLLQQEA 1393
11|Sequence|51|60|QREAAQAMYI
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 1 QREAAQAMY 9
Q+E AQA+Y
Sbjct: 60 QQEIAQALY 68
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 QREAAQAMY 9
Q+E AQA+Y
Sbjct: 60 QQEIAQALY 68
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 1 QREAAQAMY 9
+RE AQA++
Sbjct: 62 ERETAQALF 70
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 QREAAQAMYI 10
+REA A+YI
Sbjct: 161 EREATAAIYI 170
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 QREAAQAMYI 10
+REA A+YI
Sbjct: 161 EREATAAIYI 170
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 QREAAQAMYI 10
+REA A+YI
Sbjct: 161 EREATAAIYI 170
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 REAAQAMYI 10
REA MY+
Sbjct: 2143 REALDTMYL 2151
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 REAAQAMYI 10
REA MY+
Sbjct: 2144 REALDTMYL 2152
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 REAAQAMYI 10
REA MY+
Sbjct: 2144 REALDTMYL 2152
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 REAAQAMYI 10
REA MY+
Sbjct: 2144 REALDTMYL 2152
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 REAAQAMYI 10
REA MY+
Sbjct: 2144 REALDTMYL 2152
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 2 REAAQAMYI 10
R AAQ MY+
Sbjct: 122 RIAAQNMYV 130
12|Sequence|56|65|QAMYIDSYNS
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 QAMYIDSY 8
+A+Y+D+Y
Sbjct: 1237 RALYLDTY 1244
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 QAMYIDSY 8
+A+Y+D+Y
Sbjct: 1309 RALYLDTY 1316
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 QAMYIDSY 8
+A+Y+D+Y
Sbjct: 1309 RALYLDTY 1316
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 QAMYIDSY 8
+A+Y+D+Y
Sbjct: 1309 RALYLDTY 1316
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 QAMYIDSY 8
+A+Y+D+Y
Sbjct: 1309 RALYLDTY 1316
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 QAMYIDSYNS 10
+ M++D YNS
Sbjct: 681 RKMFVDFYNS 690
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 QAMYIDSYNS 10
+ M++D YNS
Sbjct: 681 RKMFVDFYNS 690
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 QAMYIDSYNS 10
+ M++D YNS
Sbjct: 681 RKMFVDFYNS 690
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 MYIDSYN 9
+Y+D+YN
Sbjct: 6418 LYLDAYN 6424
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 YIDSYN 9
Y+D+YN
Sbjct: 6396 YLDAYN 6401
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 YIDSYN 9
Y++SYN
Sbjct: 6075 YVESYN 6080
>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 MYIDSYN 9
+YIDS+N
Sbjct: 86 VYIDSHN 92
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 3 MYIDSYN 9
+YIDS+N
Sbjct: 86 VYIDSHN 92
13|Sequence|61|70|DSYNSRGFMI
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SYNSRGFMI 10
+YN+RGF++
Sbjct: 84 TYNARGFLL 92
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 DSYNSRGFM 9
D+Y S GF+
Sbjct: 510 DTYTSAGFL 518
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 SYNSRGFMI 10
++NS GF++
Sbjct: 307 THNSEGFLL 315
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 YNSRG 7
YNSRG
Sbjct: 2692 YNSRG 2696
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 YNSRG 7
YNSRG
Sbjct: 2689 YNSRG 2693
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 2 SYNSRGFMI 10
S ++RGFM+
Sbjct: 54 SMDARGFML 62
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 DSYNSRGFM 9
DSY GF+
Sbjct: 512 DSYTDAGFI 520
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 SYNSRGFMI 10
+Y SR F+I
Sbjct: 150 AYRSRNFLI 158
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 YNSRGF 8
YN++GF
Sbjct: 116 YNTQGF 121
>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 YNSRGF 8
YN++GF
Sbjct: 121 YNTQGF 126
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 YNSRGF 8
YN++GF
Sbjct: 116 YNTQGF 121
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 DSYNSRGFM 9
D+Y S G++
Sbjct: 510 DTYTSAGYL 518
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 YNSRGFMI 10
Y S+GF++
Sbjct: 686 YTSQGFVV 693
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 3 YNSRGFM 9
YNS GF+
Sbjct: 420 YNSVGFL 426
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 3 YNSRGFMI 10
Y S+GF++
Sbjct: 686 YTSQGFVV 693
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 3 YNSRGFM 9
YNS GF+
Sbjct: 425 YNSIGFL 431
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 DSYNSRGFMI 10
D Y S+G+ +
Sbjct: 1020 DEYTSKGWKL 1029
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 DSYNSRGFMI 10
D Y S+G+ +
Sbjct: 1020 DGYTSKGWKL 1029
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 DSYNSRGFMI 10
D Y S+G+ +
Sbjct: 1020 DGYTSKGWKL 1029
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 DSYNSRGFMI 10
D Y S+G+ +
Sbjct: 1020 DGYTSKGWKL 1029
14|Sequence|66|75|RGFMINGNRV
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 RGFMING 7
RGF++NG
Sbjct: 1156 RGFILNG 1162
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 1 RGFMINGNRV 10
RG ++ GNR+
Sbjct: 132 RGLVVGGNRM 141
>sp|YVBA_VACCC|UNCHARACTERIZED 11.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GFMING 7
GF+ING
Sbjct: 89 GFLING 94
>sp|PG108_VACCP|ENVELOPE protein H3|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 FMINGNRV 10
F+I GN+V
Sbjct: 31 FIITGNKV 38
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 1 RGFMINGNRV 10
+G M +GN++
Sbjct: 355 KGLMFSGNQI 364
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 3 FMINGN 8
F+INGN
Sbjct: 549 FIINGN 554
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 6 NGNRV 10
NGNRV
Sbjct: 277 NGNRV 281
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 6 NGNRV 10
NGNRV
Sbjct: 277 NGNRV 281
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 6 NGNRV 10
NGNRV
Sbjct: 277 NGNRV 281
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 2 GFMINGN 8
GF I GN
Sbjct: 549 GFRIGGN 555
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 MINGNRV 10
M+NGN +
Sbjct: 6266 MLNGNAI 6272
15|Sequence|71|80|NGNRVLGPCA
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 2 GNRVLGPC 9
G+R + PC
Sbjct: 360 GSRFISPC 367
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 NGNRVLGPC 9
+G R++ PC
Sbjct: 3230 DGRRIVVPC 3238
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 NGNRVLGPC 9
+G R++ PC
Sbjct: 3230 DGRRIVVPC 3238
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 NGNRVLGPC 9
+G R++ PC
Sbjct: 3230 DGRRIVVPC 3238
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 NGNRVLGPC 9
+G R++ PC
Sbjct: 3230 DGRRIVVPC 3238
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 NGNRVLGPC 9
+G R++ PC
Sbjct: 3230 DGRRIVVPC 3238
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 NGNRVLGPC 9
+G R++ PC
Sbjct: 3230 DGRRIVVPC 3238
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 NGNRVL 6
NGNRV+
Sbjct: 277 NGNRVI 282
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 NGNRVL 6
NGNRV+
Sbjct: 277 NGNRVI 282
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 1 NGNRVL 6
NGNRV+
Sbjct: 277 NGNRVI 282
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 NGNRVLGP 8
+GNR GP
Sbjct: 415 SGNRTYGP 422
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 3 NRVLGPCA 10
++V+GPC
Sbjct: 65 HKVMGPCV 72
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 NGNRVLGP 8
+GNR GP
Sbjct: 414 SGNRTYGP 421
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NGNRVLGP 8
+GNR GP
Sbjct: 415 SGNRTYGP 422
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 2 GNRVLGPC 9
GN+ +G C
Sbjct: 313 GNQTIGEC 320
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 NGNRVLGPCA 10
G+R L PC
Sbjct: 1115 QGSRSLTPCT 1124
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 NGNRVLGPC 9
G+R L PC
Sbjct: 1115 QGSRSLTPC 1123
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GNRVLGPC 9
G+R L PC
Sbjct: 1116 GSRSLTPC 1123
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 GNRVLGPC 9
G R L PC
Sbjct: 1120 GTRSLDPC 1127
>sp|UL62_HCMVA|UNCHARACTERIZED protein UL62|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NGNRVLGPC 9
+G +LGPC
Sbjct: 147 DGRGLLGPC 155
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 GNRVLGP 8
GN LGP
Sbjct: 2914 GNAALGP 2920
>sp|C_HENDH|PROTEIN C|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 NGNRVLGPC 9
N NR+ G C
Sbjct: 48 NMNRLRGEC 56
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 GNRVLGPC 9
G R L PC
Sbjct: 1114 GTRSLTPC 1121
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 GNRVLGPC 9
G R L PC
Sbjct: 1117 GTRSLTPC 1124
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 GNRVLGPC 9
G R L PC
Sbjct: 1120 GTRSLEPC 1127
16|Sequence|76|85|LGPCALLPHS
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 LGPCALLP 8
LGPC + P
Sbjct: 128 LGPCTMPP 135
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 3 PCALLP 8
PCA LP
Sbjct: 321 PCAFLP 326
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 3 PCALLPHS 10
PC LLP +
Sbjct: 243 PCKLLPDT 250
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 2 GPCAL 6
GPCAL
Sbjct: 314 GPCAL 318
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LGPCALLPHS 10
LGP LL HS
Sbjct: 897 LGPLYLLQHS 906
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 GPCALLPH 9
GP + LPH
Sbjct: 1111 GPFSQLPH 1118
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 GPCALLPH 9
GP + LPH
Sbjct: 1111 GPFSQLPH 1118
>sp|VU51_HHV7J|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 7 (strain JI)
Query: 3 PCALLP 8
PC L+P
Sbjct: 275 PCFLMP 280
>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PCALL 7
PCALL
Sbjct: 240 PCALL 244
>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PCALL 7
PCALL
Sbjct: 240 PCALL 244
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 GPCALLPHS 10
GP A+ PH+
Sbjct: 268 GPSAVDPHA 276
>sp|UL30_HCMVM|UNCHARACTERIZED protein UL30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PCALLPH 9
PC +LP+
Sbjct: 96 PCLVLPN 102
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GPCALLPHS 10
G C LPH+
Sbjct: 633 GRCIRLPHT 641
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 1 LGPCALLP 8
+GP LLP
Sbjct: 96 IGPADLLP 103
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 LGPCALLP 8
+G C +LP
Sbjct: 2159 IGKCLILP 2166
>sp|X_HBVC5|PROTEIN X|Hepatitis B virus genotype C
Query: 2 GPCAL 6
GPCAL
Sbjct: 67 GPCAL 71
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 2 GPCALLPH 9
GP + LPH
Sbjct: 1050 GPVSCLPH 1057
17|Sequence|81|90|LLPHSVVQWN
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PHSVVQWN 10
PH V WN
Sbjct: 353 PHLTVGWN 360
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PHSVVQWN 10
PH V WN
Sbjct: 353 PHLTVGWN 360
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LLPHSVVQW 9
LL HS ++W
Sbjct: 112 LLTHSDLEW 120
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 1 LLPHSVVQW 9
LL HS ++W
Sbjct: 112 LLTHSDLEW 120
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 LLPHSVV 7
LLPHS++
Sbjct: 650 LLPHSLM 656
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 PHSVVQW 9
PH +VQ+
Sbjct: 684 PHQIVQY 690
Query: 5 SVVQWN 10
SVV WN
Sbjct: 247 SVVTWN 252
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LLPHSVVQW 9
LL HS ++W
Sbjct: 112 LLTHSDLEW 120
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 3 PHSVVQW 9
PH +VQ+
Sbjct: 684 PHQIVQY 690
Query: 5 SVVQWN 10
SVV WN
Sbjct: 247 SVVTWN 252
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 3 PHSVVQW 9
P S+V+W
Sbjct: 351 PRSLVEW 357
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 PHSVVQW 9
PH ++W
Sbjct: 1196 PHKRIEW 1202
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 LPHSVVQW 9
LPH V W
Sbjct: 1178 LPHKRVFW 1185
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 3 PHSVVQW 9
P S+V+W
Sbjct: 354 PRSLVEW 360
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 LLPHSVV 7
LLP SVV
Sbjct: 489 LLPQSVV 495
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 5 SVVQWN 10
SVV WN
Sbjct: 238 SVVTWN 243
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 PHSVVQW 9
PH ++Q+
Sbjct: 685 PHEIIQY 691
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 PHSVVQW 9
PH ++Q+
Sbjct: 685 PHEIIQY 691
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 LPHSVVQW 9
+PH+ + W
Sbjct: 205 IPHAAMDW 212
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 LPHSVVQW 9
+PH+ + W
Sbjct: 205 IPHAAMDW 212
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 5 SVVQWN 10
SVV WN
Sbjct: 243 SVVTWN 248
Query: 3 PHSVVQ 8
PH +VQ
Sbjct: 680 PHEIVQ 685
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 5 SVVQWN 10
SVV WN
Sbjct: 243 SVVTWN 248
Query: 3 PHSVVQ 8
PH +VQ
Sbjct: 680 PHEIVQ 685
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 5 SVVQWN 10
SVV WN
Sbjct: 243 SVVTWN 248
Query: 3 PHSVVQ 8
PH +VQ
Sbjct: 680 PHEIVQ 685
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 3 PHSVVQW 9
PH ++Q+
Sbjct: 351 PHEIIQY 357
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 5 SVVQWN 10
SVV WN
Sbjct: 240 SVVTWN 245
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 SVVQWN 10
SVV WN
Sbjct: 254 SVVMWN 259
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 SVVQWN 10
SVV WN
Sbjct: 254 SVVMWN 259
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 5 SVVQWN 10
SVV WN
Sbjct: 240 SVVTWN 245
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 5 SVVQWN 10
SVV WN
Sbjct: 240 SVVTWN 245
>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LLPHSVVQW 9
L PHSVV +
Sbjct: 102 LEPHSVVAF 110
>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LLPHSVVQW 9
L PHSVV +
Sbjct: 102 LEPHSVVAF 110
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 5 SVVQWN 10
SVV WN
Sbjct: 238 SVVTWN 243
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 SVVQWN 10
SVV WN
Sbjct: 254 SVVMWN 259
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 SVVQWN 10
SVV WN
Sbjct: 253 SVVMWN 258
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 SVVQWN 10
SVV WN
Sbjct: 254 SVVMWN 259
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 SVVQWN 10
SVV WN
Sbjct: 240 SVVTWN 245
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 5 SVVQWN 10
SVV WN
Sbjct: 241 SVVTWN 246
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LLPHSVVQ 8
+LPH V++
Sbjct: 166 ILPHEVLR 173
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 SVVQWN 10
SVV WN
Sbjct: 240 SVVTWN 245
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 5 SVVQWN 10
SVV WN
Sbjct: 233 SVVTWN 238
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 LLPHSVVQW 9
++PH V W
Sbjct: 1178 VIPHKRVFW 1186
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 5 SVVQWN 10
SVV WN
Sbjct: 241 SVVTWN 246
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 SVVQWN 10
SVV WN
Sbjct: 240 SVVTWN 245
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 SVVQWN 10
SVV WN
Sbjct: 241 SVVTWN 246
>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LPHSVVQW 9
PH VQW
Sbjct: 151 FPHPHVQW 158
>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LPHSVVQW 9
PH VQW
Sbjct: 151 FPHPHVQW 158
>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LPHSVVQW 9
PH VQW
Sbjct: 151 FPHPHVQW 158
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 SVVQWN 10
SVV WN
Sbjct: 253 SVVTWN 258
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 SVVQWN 10
SVV WN
Sbjct: 239 SVVTWN 244
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 5 SVVQWN 10
SVV WN
Sbjct: 238 SVVTWN 243
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 5 SVVQWN 10
SVV WN
Sbjct: 241 SVVTWN 246
>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PHSVV 7
PHSVV
Sbjct: 345 PHSVV 349
>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PHSVV 7
PHSVV
Sbjct: 345 PHSVV 349
18|Sequence|86|95|VVQWNVGSHQ
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 VQWNVGSH 9
V+W VGSH
Sbjct: 136 VEWQVGSH 143
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1676 VVQWATGAH 1684
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 VVQWNVGSH 9
VVQW G+H
Sbjct: 1675 VVQWATGAH 1683
>sp|US03_HCMVA|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QWNVGSH 9
+WN+G H
Sbjct: 97 EWNIGGH 103
>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 QWNVGSH 9
+WN+G H
Sbjct: 97 EWNIGGH 103
>sp|PHOSP_CHAV|PHOSPHOPROTEIN virus (strain I653514) (CHPV)
Query: 1 VVQWNVGSH 9
++QW G H
Sbjct: 132 LLQWETGIH 140
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 VQWNVGSHQ 10
++W SHQ
Sbjct: 1196 IRWVAASHQ 1204
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VVQWNVGSH 9
++ WN G H
Sbjct: 278 LLYWNSGGH 286
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 3 QWNVG 7
+WNVG
Sbjct: 400 EWNVG 404
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 VVQWNVGSH 9
++ W GSH
Sbjct: 485 IIPWISGSH 493
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VQWNVGSHQ 10
V W VGS +
Sbjct: 837 VMWQVGSSK 845
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 3 QWNVG 7
QWN G
Sbjct: 402 QWNFG 406
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 3 QWNVG 7
QWN G
Sbjct: 401 QWNFG 405
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 3 QWNVG 7
QWN G
Sbjct: 426 QWNFG 430
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 3 QWNVG 7
QWN G
Sbjct: 398 QWNFG 402
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 3 QWNVG 7
QWN G
Sbjct: 398 QWNFG 402
>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka
Query: 1 VVQWNVGSHQ 10
++QW G H+
Sbjct: 13 LLQWGWGLHR 22
>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 VVQWNVGSHQ 10
++QW G H+
Sbjct: 13 LLQWGWGLHR 22
>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64
Query: 3 QWNVG 7
QWN G
Sbjct: 88 QWNFG 92
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VVQWNVGSH 9
V++W SH
Sbjct: 181 VLKWKFDSH 189
19|Sequence|91|100|VGSHQDITED
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 VGSHQDITED 10
+GS QD+ D
Sbjct: 245 IGSQQDLVAD 254
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 VGSHQDITED 10
+GS QD+ D
Sbjct: 245 IGSQQDLVAD 254
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 HQDITED 10
HQ ITED
Sbjct: 1965 HQWITED 1971
>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)
Query: 2 GSHQDITED 10
G+H D ED
Sbjct: 167 GTHIDYNED 175
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 4 HQDITED 10
HQD ED
Sbjct: 530 HQDTNED 536
>sp|CEP3_HCMVM|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain Merlin)
Query: 2 GSHQDITED 10
GSH++ T D
Sbjct: 79 GSHREATHD 87
>sp|CEP3_HCMVA|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain AD169)
Query: 2 GSHQDITED 10
GSH++ T D
Sbjct: 79 GSHREATHD 87
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VGSHQ 5
VGSHQ
Sbjct: 58 VGSHQ 62
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VGSHQ 5
VGSHQ
Sbjct: 37 VGSHQ 41
20|Sequence|96|105|DITEDSFSLF
>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate
Query: 1 DITEDSFSLF 10
+IT D F LF
Sbjct: 170 EITSDGFKLF 179
>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain
Query: 1 DITEDSFSLF 10
+IT D F LF
Sbjct: 170 EITSDGFKLF 179
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 1 DITEDS 6
DITEDS
Sbjct: 362 DITEDS 367
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 ITEDSFSLF 10
+TED F L
Sbjct: 372 LTEDDFGLL 380
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 ITEDSFSLF 10
+TED F L
Sbjct: 374 LTEDDFGLL 382
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 ITEDSFSLF 10
+TED F L
Sbjct: 367 LTEDDFGLL 375
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 3 TEDSFS 8
TEDSF+
Sbjct: 204 TEDSFA 209
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 DITEDSFS 8
D+T DS+S
Sbjct: 2399 DLTSDSWS 2406
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 1 DITEDS 6
D+TEDS
Sbjct: 370 DVTEDS 375
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 TEDSFSLF 10
T+D FS+F
Sbjct: 1121 TQDFFSVF 1128
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 TEDSFSLF 10
T+D FS+F
Sbjct: 1121 TQDFFSVF 1128
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 TEDSFSLF 10
T+D FS+F
Sbjct: 1121 TQDFFSVF 1128
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 DITEDS 6
D+TEDS
Sbjct: 361 DLTEDS 366
>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 ITEDSFSL 9
I +DSF+L
Sbjct: 33 INDDSFTL 40
>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)
Query: 2 ITEDSFSL 9
I +DSF+L
Sbjct: 33 INDDSFTL 40
21|Sequence|101|110|SFSLFWLLEP
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 1 SFSLFWLL 8
SFSLF+LL
Sbjct: 121 SFSLFYLL 128
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SFSLFWLL 8
SFSLF+LL
Sbjct: 154 SFSLFYLL 161
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 1 SFSLFWLL 8
SFSLF+LL
Sbjct: 154 SFSLFYLL 161
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 6 WLLEP 10
WL+EP
Sbjct: 239 WLIEP 243
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SLFWLL 8
SLFW L
Sbjct: 359 SLFWTL 364
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SFSLFWLLEP 10
SFS W + P
Sbjct: 306 SFSTLWKMGP 315
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 3 SLFWLLEP 10
+LFW ++P
Sbjct: 1712 NLFWAIKP 1719
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SFSLFWLLEP 10
SFS W + P
Sbjct: 338 SFSTLWKMGP 347
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FSLFW 6
F+LFW
Sbjct: 743 FALFW 747
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 SLFWLLEP 10
+LFW ++P
Sbjct: 1716 NLFWAVKP 1723
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 SLFWLLEP 10
+LFW ++P
Sbjct: 1704 NLFWAVKP 1711
22|Sequence|106|115|WLLEPRIEIV
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 WLLEPRIE 8
W L+P+IE
Sbjct: 276 WTLDPKIE 283
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 WLLEPRIE 8
W L+P+IE
Sbjct: 276 WTLDPKIE 283
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 1 WLLEPRIE 8
W L+P+IE
Sbjct: 276 WTLDPKIE 283
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 WLLEPRIE 8
W L+P+IE
Sbjct: 276 WTLDPKIE 283
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 WLLEPRIE 8
W L+P+IE
Sbjct: 276 WTLDPKIE 283
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 WLLEPRIE 8
W ++P+IE
Sbjct: 276 WTVDPKIE 283
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLSPR 101
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 WLLEPR 6
WLL PR
Sbjct: 96 WLLPPR 101
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 1 WLLEPRIE 8
W ++P+IE
Sbjct: 276 WTVDPKIE 283
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 WLLEPRIE 8
W ++P+IE
Sbjct: 276 WTVDPKIE 283
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 WLLEPR 6
WL+ PR
Sbjct: 96 WLMSPR 101
>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56
Query: 1 WLLEPR 6
WL EP+
Sbjct: 45 WLTEPK 50
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 1 WLLEPR 6
WL EP+
Sbjct: 102 WLAEPK 107
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 WLLEPR 6
W+L PR
Sbjct: 660 WVLTPR 665
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 WLLEPRI 7
W+L PR+
Sbjct: 375 WVLRPRV 381
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 WLLEPRI 7
W+L PR+
Sbjct: 375 WVLRPRV 381
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 WLLEPRI 7
W+L PR+
Sbjct: 375 WVLRPRV 381
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 WLLEPRIEIV 10
WLL +EIV
Sbjct: 87 WLLRRYLEIV 96
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)
Query: 1 WLLEPRIEIV 10
WLL +EIV
Sbjct: 86 WLLRRYLEIV 95
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 1 WLLEPR 6
WL EP+
Sbjct: 102 WLAEPK 107
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WLLEPR 6
WL+ PR
Sbjct: 96 WLVSPR 101
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 WLLEPRI 7
WL PR+
Sbjct: 447 WLQNPRV 453
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WLLEPRIEIV 10
WL +P+I ++
Sbjct: 260 WLTDPKIGLL 269
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WLLEPRIEIV 10
WL +P+I ++
Sbjct: 260 WLTDPKIGLL 269
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 1 WLLEPRI 7
WL PR+
Sbjct: 390 WLQNPRV 396
>sp|REV_HV1AN|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 WLLEPRIE 8
W ++PR E
Sbjct: 93 WTVDPRAE 100
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 WLLEPRIE 8
W ++P+I+
Sbjct: 1719 WAVKPKIQ 1726
23|Sequence|111|120|RIEIVVVGTG
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 1 RIEIVVVGTG 10
++ I+V GTG
Sbjct: 303 QVPIIVTGTG 312
24|Sequence|116|125|VVGTGDRTER
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 1 VVGTGDRTER 10
V+ TG+RT R
Sbjct: 63 VINTGNRTNR 72
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 VVGTGDRT 8
VVGT DR+
Sbjct: 515 VVGTTDRS 522
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 VVGTGDRT 8
VVGT DR+
Sbjct: 515 VVGTTDRS 522
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VVGTGDRT 8
VVGT DR+
Sbjct: 515 VVGTTDRS 522
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VVGTGDRT 8
VVGT DR+
Sbjct: 515 VVGTTDRS 522
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VVGTGDRT 8
VVGT DR+
Sbjct: 515 VVGTTDRS 522
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 VVGTGDRT 8
VVGT DR+
Sbjct: 515 VVGTTDRS 522
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 VVGTGD 6
+VGTGD
Sbjct: 1179 IVGTGD 1184
>sp|PB1F2_I96A0|PROTEIN PB1-F2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 GTGDRTER 10
G G RT+R
Sbjct: 22 GNGQRTQR 29
>sp|PB1F2_I68A4|PROTEIN PB1-F2|Influenza A virus (strain A/Hong
Query: 3 GTGDRTER 10
G G RT+R
Sbjct: 22 GNGQRTQR 29
>sp|PB1F2_I01A0|PROTEIN PB1-F2|Influenza A virus (strain A/Silky
Query: 3 GTGDRTER 10
G G RT+R
Sbjct: 22 GNGQRTQR 29
>sp|PB1F2_I00A0|PROTEIN PB1-F2|Influenza A virus (strain A/Duck/Hong
Query: 3 GTGDRTER 10
G G RT+R
Sbjct: 22 GNGQRTQR 29
>sp|PB1F2_I01A3|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 3 GTGDRTER 10
G G RT+R
Sbjct: 22 GNGQRTQR 29
>sp|PB1F2_I01A2|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 3 GTGDRTER 10
G G RT+R
Sbjct: 22 GNGQRTQR 29
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 VVGTGDR 7
VVGT DR
Sbjct: 517 VVGTTDR 523
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 VVGTGDR 7
VVGT DR
Sbjct: 515 VVGTTDR 521
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 5 GDRTER 10
G+RTER
Sbjct: 745 GERTER 750
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VGTGDRTER 10
+ G+RT+R
Sbjct: 816 IAVGERTDR 824
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 GTGDRTER 10
G G RTER
Sbjct: 1498 GQGTRTER 1505
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 VVGTGD 6
+VGTGD
Sbjct: 662 IVGTGD 667
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 VVGTGD 6
+VGTGD
Sbjct: 662 IVGTGD 667
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 VVGTGD 6
+VGTGD
Sbjct: 662 IVGTGD 667
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VVGTGD 6
+VGTGD
Sbjct: 662 IVGTGD 667
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 VVGTGD 6
+VGTGD
Sbjct: 662 IVGTGD 667
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 VVGTGD 6
+VGTGD
Sbjct: 662 IVGTGD 667
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VVGTGD 6
+VGTGD
Sbjct: 662 IVGTGD 667
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 5 GDRTER 10
GD+TER
Sbjct: 462 GDQTER 467
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 VVGTGD 6
+VGTGD
Sbjct: 662 IVGTGD 667
25|Sequence|121|130|DRTERLQSQV
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RTERLQSQV 10
R+ERL++Q+
Sbjct: 253 RSERLEAQL 261
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RTERLQSQV 10
R+ERL++Q+
Sbjct: 253 RSERLEAQL 261
26|Sequence|126|135|LQSQVLQAMR
***** No hits found ******
27|Sequence|131|140|LQAMRQRGIA
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 LQAMRQRGI 9
LQA QRG+
Sbjct: 2028 LQAQVQRGV 2036
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 LQAMRQRGI 9
LQA QRG+
Sbjct: 2028 LQAQVQRGV 2036
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 4 MRQRGI 9
MRQRG+
Sbjct: 757 MRQRGL 762
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 2 QAMRQRGIA 10
+++RQRGI+
Sbjct: 383 ESVRQRGIS 391
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 QAMRQRG 8
+A+RQRG
Sbjct: 1868 RALRQRG 1874
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 4 MRQRGIA 10
+RQRG+A
Sbjct: 293 VRQRGVA 299
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 1 LQAMRQRGIA 10
LQA+ +RG +
Sbjct: 33 LQALGERGFS 42
28|Sequence|136|145|QRGIAVEVQD
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 1 QRGIAVEVQ 9
+RG+ VEV+
Sbjct: 112 KRGVTVEVR 120
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 1 QRGIAVEVQ 9
+RGI VEV+
Sbjct: 112 KRGITVEVR 120
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 1 QRGIAVEVQ 9
+RG+ VEV+
Sbjct: 112 KRGVTVEVR 120
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 RGIAVEVQ 9
RG+ +E+Q
Sbjct: 560 RGVPIELQ 567
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 1 QRGIAVEVQ 9
+RG+ VEV+
Sbjct: 112 KRGLTVEVR 120
29|Sequence|141|150|VEVQDTPNAC
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 VEVQDTPN 8
VE+ D PN
Sbjct: 508 VEISDNPN 515
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 3 VQDTPNAC 10
++ TP+AC
Sbjct: 106 LRPTPDAC 113
30|Sequence|146|155|TPNACATFNF
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 2 PNACATFN 9
PN C TFN
Sbjct: 86 PNCCRTFN 93
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PNACATFN 9
PN C TFN
Sbjct: 86 PNCCRTFN 93
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 2 PNACATFN 9
PN C TFN
Sbjct: 86 PNCCRTFN 93
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PNACATFN 9
PN C TFN
Sbjct: 86 PNCCRTFN 93
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 2 PNACATFN 9
PN C TFN
Sbjct: 86 PNCCHTFN 93
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 2 PNACATFN 9
PN C TFN
Sbjct: 86 PNCCHTFN 93
>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TPNACATFNF 10
TP A ATF F
Sbjct: 327 TPQAVATFKF 336
>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TPNACATFNF 10
TP A ATF F
Sbjct: 326 TPQAVATFKF 335
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 2 PNACATFNF 10
PN C T F
Sbjct: 168 PNYCYTITF 176
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 2 PNACATFN 9
PNAC N
Sbjct: 94 PNACDKHN 101
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 PNACA 6
PNAC+
Sbjct: 1487 PNACS 1491
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PNACATFN 9
PNAC N
Sbjct: 124 PNACDKHN 131
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 NACATFN 9
++C TFN
Sbjct: 9 DSCKTFN 15
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 3 NACATFN 9
++C TFN
Sbjct: 9 DSCKTFN 15
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 NACATFNF 10
N C FNF
Sbjct: 536 NKCVNFNF 543
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 2 PNACATFNF 10
PN TF+F
Sbjct: 248 PNDTVTFSF 256
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 2 PNACATFNF 10
PN TF+F
Sbjct: 248 PNDTVTFSF 256
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 2 PNACATFN 9
PNAC+ N
Sbjct: 89 PNACSVNN 96
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 NACATFNF 10
N C FNF
Sbjct: 522 NQCVNFNF 529
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 2 PNACATFNF 10
PN TF+F
Sbjct: 248 PNDTVTFSF 256
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 2 PNACATFNF 10
PN TF+F
Sbjct: 248 PNDTVTFSF 256
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 2 PNACATFNF 10
PN TF+F
Sbjct: 248 PNDTVTFSF 256
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 2 PNACATFNF 10
PN TF+F
Sbjct: 248 PNDTVTFSF 256
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 2 PNACATFNF 10
PN TF+F
Sbjct: 248 PNDTVTFSF 256
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 2 PNACATFN 9
PNAC+ N
Sbjct: 89 PNACSANN 96
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 2 PNACATFNF 10
PN TF+F
Sbjct: 248 PNDTVTFSF 256
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 2 PNACATFNF 10
PN TF+F
Sbjct: 248 PNDTVTFSF 256
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 PNACATFNF 10
PN TF F
Sbjct: 248 PNDTVTFTF 256
31|Sequence|151|160|ATFNFLCHEG
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TFNFLCHEG 10
T+NFL H+G
Sbjct: 77 TYNFLKHKG 85
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TFNFLCHEG 10
T+NFL H+G
Sbjct: 77 TYNFLKHKG 85
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 ATFNFL 6
ATFNFL
Sbjct: 664 ATFNFL 669
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 5 FLCHEG 10
++CHEG
Sbjct: 650 YMCHEG 655
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 1 ATFNFL 6
ATFNFL
Sbjct: 664 ATFNFL 669
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 TFNFLCHEG 10
TFN HEG
Sbjct: 870 TFNMEEHEG 878
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 2 TFNFLC 7
TFNF C
Sbjct: 368 TFNFDC 373
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 2 TFNFLC 7
TFNF C
Sbjct: 371 TFNFDC 376
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 3 FNFLCHEG 10
F ++C EG
Sbjct: 934 FAYVCEEG 941
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 2 TFNFLCHEG 10
T NFL H+G
Sbjct: 154 TRNFLEHKG 162
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 1 ATFNFLCHEG 10
A +++C+EG
Sbjct: 110 ANISYVCNEG 119
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 ATFNF 5
ATFNF
Sbjct: 1073 ATFNF 1077
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 5 FLCHEG 10
F CH G
Sbjct: 792 FACHSG 797
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 5 FLCHEG 10
F CH G
Sbjct: 789 FACHSG 794
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 5 FLCHEG 10
F CH G
Sbjct: 788 FACHSG 793
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 5 FLCHEG 10
F CH G
Sbjct: 790 FACHSG 795
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 5 FLCHEG 10
F CH G
Sbjct: 790 FACHSG 795
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 5 FLCHEG 10
F CH G
Sbjct: 790 FACHSG 795
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 5 FLCHEG 10
F CH G
Sbjct: 789 FACHSG 794
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 5 FLCHEG 10
F CH G
Sbjct: 790 FACHSG 795
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 FLCHEG 10
F CH G
Sbjct: 790 FACHSG 795
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 4 NFLCHE 9
+ LCHE
Sbjct: 83 DLLCHE 88
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 5 FLCHEG 10
F+C EG
Sbjct: 102 FVCREG 107
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 5 FLCHEG 10
F CH G
Sbjct: 788 FACHAG 793
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 5 FLCHEG 10
F CH G
Sbjct: 795 FACHAG 800
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 5 FLCHEG 10
F CH G
Sbjct: 795 FACHAG 800
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 5 FLCHEG 10
F CH G
Sbjct: 791 FACHAG 796
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 FLCHEG 10
F CH G
Sbjct: 790 FACHAG 795
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 FLCHEG 10
F CH G
Sbjct: 790 FACHAG 795
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 FLCHEG 10
F CH G
Sbjct: 790 FACHAG 795
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 FLCHEG 10
F CH G
Sbjct: 790 FACHAG 795
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 FLCHEG 10
F CH G
Sbjct: 788 FACHAG 793
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 FLCHEG 10
F CH G
Sbjct: 788 FACHAG 793
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 FLCHEG 10
F CH G
Sbjct: 788 FACHAG 793
>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 ATFNFLC 7
ATF LC
Sbjct: 229 ATFGHLC 235
>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 ATFNFLC 7
ATF LC
Sbjct: 229 ATFGHLC 235
>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 ATFNFLC 7
ATF LC
Sbjct: 229 ATFGHLC 235
>sp|NCAP_VSIVC|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 ATFNFLC 7
ATF LC
Sbjct: 229 ATFGHLC 235
>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 ATFNFLC 7
ATF LC
Sbjct: 229 ATFGHLC 235
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 ATFNFLCHEG 10
+TF LC +G
Sbjct: 1437 STFINLCRDG 1446
32|Sequence|156|165|LCHEGRVTGA
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 1 LCHEGRVT 8
+CHEG+ T
Sbjct: 651 MCHEGKQT 658
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 119 HEGKVTG 125
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 119 HEGKVTG 125
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 118 HEGKVTG 124
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 118 HEGKVTG 124
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 125 HEGKVTG 131
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 119 HEGKVTG 125
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 125 HEGKVTG 131
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 3 HEGRVTG 9
HEG+VTG
Sbjct: 116 HEGKVTG 122
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 HEGRVTG 9
HEG++TG
Sbjct: 118 HEGKITG 124
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 674 CYSGRVSAA 682
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 672 CYSGRVSAA 680
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 CHEGRVTGA 10
C+ GRV+ A
Sbjct: 672 CYSGRVSAA 680
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 LCHEGR 6
+CHEG+
Sbjct: 1063 ICHEGK 1068
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 CHEGRVTG 9
C+ GR TG
Sbjct: 3367 CYNGRPTG 3374
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 CHEGRVTG 9
C+ GR TG
Sbjct: 3367 CYNGRPTG 3374
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LCHEGRVT 8
LC EG++T
Sbjct: 339 LCIEGKIT 346
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LCHEGRVT 8
LC EG++T
Sbjct: 339 LCIEGKIT 346
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LCHEGRVT 8
LC EG++T
Sbjct: 339 LCIEGKIT 346
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LCHEGRVT 8
LC EG++T
Sbjct: 339 LCIEGKIT 346
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LCHEGRVT 8
LC EG++T
Sbjct: 339 LCIEGKIT 346
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LCHEGRVTG 9
L H GR+TG
Sbjct: 939 LLHLGRLTG 947
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LCHEGRVTG 9
L H GR+TG
Sbjct: 939 LLHLGRLTG 947
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 HEGRVT 8
HEG+VT
Sbjct: 1884 HEGQVT 1889
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 HEGRVT 8
HEG+VT
Sbjct: 1884 HEGQVT 1889
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HEGRVT 8
HEG++T
Sbjct: 431 HEGKIT 436
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HEGRVT 8
HEG++T
Sbjct: 431 HEGKIT 436
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 2 CHEGR 6
CH+GR
Sbjct: 181 CHDGR 185
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 2 CHEGR 6
CH+GR
Sbjct: 182 CHDGR 186
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 2 CHEGR 6
CH+GR
Sbjct: 182 CHDGR 186
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 2 CHEGR 6
CH+GR
Sbjct: 181 CHDGR 185
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 2 CHEGR 6
CH+GR
Sbjct: 181 CHDGR 185
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 2 CHEGR 6
CH+GR
Sbjct: 182 CHDGR 186
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 2 CHEGR 6
CH+GR
Sbjct: 182 CHDGR 186
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 2 CHEGR 6
CH+GR
Sbjct: 181 CHDGR 185
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 2 CHEGR 6
CH+GR
Sbjct: 182 CHDGR 186
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 2 CHEGR 6
CH+GR
Sbjct: 182 CHDGR 186
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 2 CHEGR 6
CH+GR
Sbjct: 182 CHDGR 186
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 2 CHEGR 6
CH+GR
Sbjct: 181 CHDGR 185
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 EGRVTGA 10
EGR+TG
Sbjct: 2570 EGRLTGG 2576
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 CHEGRVTGA 10
CH R TG+
Sbjct: 831 CHGVRKTGS 839
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 1 LCHEGRVTGA 10
LC+ G+++ +
Sbjct: 58 LCNNGKISSS 67
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 1 LCHEGRVTGA 10
LC+ G+++ +
Sbjct: 58 LCNNGKISSS 67
>sp|HEMA_CVHN1|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N1)
Query: 1 LCHEGRVTGA 10
LC+ G+++ +
Sbjct: 58 LCNNGKISSS 67
>sp|DR5_HHV6U|UNCHARACTERIZED protein DR5|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LCHEGRV 7
LC GRV
Sbjct: 35 LCRRGRV 41
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 3 HEGRVTG 9
H+G+ TG
Sbjct: 91 HKGQATG 97
33|Sequence|161|170|RVTGAALIPP
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 VTGAALIP 9
VTG AL+P
Sbjct: 592 VTGRALLP 599
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GAALIPP 10
GAA++PP
Sbjct: 12 GAAVVPP 18
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 VTGAALIPP 10
V G+A +PP
Sbjct: 40 VIGSAELPP 48
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 VTGAALIPP 10
VTG +PP
Sbjct: 40 VTGKVELPP 48
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GAALIPP 10
GAA++PP
Sbjct: 12 GAAVMPP 18
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 3 TGAALIP 9
TG AL+P
Sbjct: 589 TGRALLP 595
34|Sequence|166|175|ALIPPPGGTS
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 1 ALIPPPGGTS 10
A +PP GG S
Sbjct: 323 AFLPPEGGAS 332
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 ALIPPPGGT 9
L PPPGGT
Sbjct: 405 GLQPPPGGT 413
>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64
Query: 1 ALIPPPGGT 9
L PPP GT
Sbjct: 92 GLTPPPSGT 100
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 ALIPPPGGT 9
L PPP GT
Sbjct: 403 GLTPPPSGT 411
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 1 ALIPPPGGT 9
L PPP GT
Sbjct: 430 GLTPPPSGT 438
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 5 PPGGTS 10
PPGG S
Sbjct: 15 PPGGAS 20
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 ALIPPPGGT 9
L PPP GT
Sbjct: 400 GLSPPPNGT 408
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 PPPGGTS 10
PPPG S
Sbjct: 607 PPPGAGS 613
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PPPGGTS 10
PPPG S
Sbjct: 607 PPPGAGS 613
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PPPGGTS 10
PPPG S
Sbjct: 607 PPPGAGS 613
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 PPPGGT 9
PPP GT
Sbjct: 2865 PPPPGT 2870
Query: 2 LIPPPG 7
LIP PG
Sbjct: 2220 LIPEPG 2225
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 5 PPGGTS 10
PPGG+S
Sbjct: 454 PPGGSS 459
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PPPGGTS 10
PPP G++
Sbjct: 123 PPPTGST 129
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 ALIPPP 6
LIPPP
Sbjct: 1840 GLIPPP 1845
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 1 ALIPPPGGT 9
L PPP GT
Sbjct: 402 GLSPPPNGT 410
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 1 ALIPPPGGT 9
L PPP GT
Sbjct: 401 GLSPPPNGT 409
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 4 PPPGGTS 10
PPP G++
Sbjct: 123 PPPTGST 129
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PPPG 7
PPPG
Sbjct: 205 PPPG 208
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 PPPG 7
PPPG
Sbjct: 6065 PPPG 6068
Query: 1 ALIPPPGGTS 10
+L PGGTS
Sbjct: 5064 SLYVKPGGTS 5073
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 PPPG 7
PPPG
Sbjct: 6042 PPPG 6045
Query: 1 ALIPPPGGTS 10
+L PGGTS
Sbjct: 5041 SLYVKPGGTS 5050
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 PPPG 7
PPPG
Sbjct: 6048 PPPG 6051
Query: 6 PGGTS 10
PGGTS
Sbjct: 5055 PGGTS 5059
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 5 PPGGTS 10
PPGG S
Sbjct: 294 PPGGIS 299
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 5 PPGGTS 10
PPGG S
Sbjct: 294 PPGGIS 299
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 5 PPGGTS 10
PPGG S
Sbjct: 294 PPGGIS 299
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 5 PPGGTS 10
PPGG S
Sbjct: 294 PPGGIS 299
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 ALIPPPGG 8
ALIP P G
Sbjct: 990 ALIPAPIG 997
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 1 ALIPPPGGT 9
L PPP GT
Sbjct: 400 GLSPPPNGT 408
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 1 ALIPPPGGT 9
L PPP GT
Sbjct: 400 GLSPPPNGT 408
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PPPGGTS 10
PP G TS
Sbjct: 969 PPAGSTS 975
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PPPGGTS 10
PP G TS
Sbjct: 969 PPAGSTS 975
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 4 PPPGGTS 10
PP GG S
Sbjct: 297 PPKGGQS 303
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 4 PPPGGT 9
PPP GT
Sbjct: 407 PPPSGT 412
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LIPPP 6
L+PPP
Sbjct: 113 LLPPP 117
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LIPPP 6
L+PPP
Sbjct: 113 LLPPP 117
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 1 ALIPPPGGT 9
L PPP GT
Sbjct: 402 GLSPPPNGT 410
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 4 PPPGGT 9
PPP GT
Sbjct: 407 PPPSGT 412
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LIPPP 6
L+PPP
Sbjct: 113 LLPPP 117
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 6 PGGTS 10
PGGTS
Sbjct: 5042 PGGTS 5046
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 6 PGGTS 10
PGGTS
Sbjct: 5080 PGGTS 5084
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 6 PGGTS 10
PGGTS
Sbjct: 5100 PGGTS 5104
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 6 PGGTS 10
PGGTS
Sbjct: 5130 PGGTS 5134
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 4 PPPGG 8
PPP G
Sbjct: 133 PPPNG 137
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 3 IPPPGGTS 10
IP P GT+
Sbjct: 576 IPLPNGTA 583
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 IPPPGGTS 10
IP P GT+
Sbjct: 576 IPLPNGTA 583
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 5 PPGGTS 10
PPGG S
Sbjct: 1127 PPGGAS 1132
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 IPPPGGTS 10
I PP GTS
Sbjct: 637 INPPYGTS 644
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 4 PPPG 7
PPPG
Sbjct: 519 PPPG 522
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 5 PPGGTS 10
PPGG S
Sbjct: 1127 PPGGAS 1132
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 4 PPPG 7
PPPG
Sbjct: 519 PPPG 522
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 5 PPGGTS 10
PPGG S
Sbjct: 1127 PPGGAS 1132
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 5 PPGGTS 10
PPGG S
Sbjct: 1127 PPGGAS 1132
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 IPPPGG 8
+P PGG
Sbjct: 721 LPTPGG 726
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 ALIPPPGG 8
L PPP G
Sbjct: 434 GLTPPPSG 441
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 3 IPPPGG 8
+P PGG
Sbjct: 145 VPGPGG 150
>sp|SHDAG_HDVNA|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 4 PPPGGTS 10
PPPGG +
Sbjct: 147 PPPGGVN 153
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 5 PPGGTS 10
PPGG S
Sbjct: 1132 PPGGAS 1137
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 5 PPGGTS 10
PPGG S
Sbjct: 1132 PPGGAS 1137
>sp|VP3_SVSAP|UNCHARACTERIZED protein VP3|Sapporo virus (isolate
Query: 2 LIPPPGGT 9
LIP P GT
Sbjct: 135 LIPRPSGT 142
>sp|VP3_SVM93|UNCHARACTERIZED protein VP3|Sapporo virus (strain Human/United
Query: 2 LIPPPGGT 9
LIP P GT
Sbjct: 135 LIPRPSGT 142
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 IPPPGG 8
IP PGG
Sbjct: 680 IPHPGG 685
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 2 LIPPPGG 8
L PPP G
Sbjct: 122 LPPPPDG 128
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 4 PPPG 7
PPPG
Sbjct: 182 PPPG 185
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LIPPPG 7
LIP PG
Sbjct: 57 LIPTPG 62
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 LIPPPG 7
LIP PG
Sbjct: 57 LIPTPG 62
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 3 IPPPG 7
+PPPG
Sbjct: 39 LPPPG 43
>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1
Query: 1 ALIPPPG 7
AL+PPP
Sbjct: 209 ALLPPPA 215
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 LIPPPGG 8
L PPP G
Sbjct: 122 LPPPPDG 128
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 LIPPPGG 8
L PPP G
Sbjct: 122 LPPPPDG 128
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 LIPPPGG 8
L PPP G
Sbjct: 122 LPPPPDG 128
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 4 PPPG 7
PPPG
Sbjct: 182 PPPG 185
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 5 PPGGT 9
PPGG+
Sbjct: 719 PPGGS 723
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 IPPPGG 8
IP PGG
Sbjct: 682 IPHPGG 687
35|Sequence|171|184|PGGTSLTSLGQAAQ
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 GGTSLTSLGQAAQ 14
GG SLTS+ A +
Sbjct: 1234 GGKSLTSIALATK 1246
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 PGGTSLTSLG 10
PGG S+T G
Sbjct: 295 PGGISMTVTG 304
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 PGGTSLTSLG 10
PGG S+T G
Sbjct: 295 PGGISMTVTG 304
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 PGGTSLTSLG 10
PGG S+T G
Sbjct: 295 PGGISMTVTG 304
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 PGGTSLTSLG 10
PGG S+T G
Sbjct: 295 PGGISMTVTG 304
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 2 GGTSLTSLG 10
GG SLT +G
Sbjct: 219 GGESLTGIG 227
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 PGGTSLTSLGQ 11
PG LTSL Q
Sbjct: 640 PGPPDLTSLPQ 650
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 PGGTSLTSLGQ 11
PG LTSL Q
Sbjct: 640 PGPPDLTSLPQ 650
>sp|PHOSP_CHAV|PHOSPHOPROTEIN virus (strain I653514) (CHPV)
Query: 1 PGGTSLTSLG 10
PG S TSLG
Sbjct: 201 PGSKSNTSLG 210
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 GTSLTSLGQAAQ 14
G LTSLG+A
Sbjct: 705 GGLLTSLGKAVH 716
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 GTSLTSLGQAAQ 14
G LTSLG+A
Sbjct: 705 GGLLTSLGKAVH 716
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 GTSLTSLGQA 12
G +TSLG+A
Sbjct: 1004 GDYITSLGRA 1013