NDUF2_HUMAN Blast OutputR
HumanVirus
1|SequenceR|10|1|ARFLDQSWGM

>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)

Query: 2 RFLDQSWGM 10
RF+ +WG+
Sbjct: 355 RFVKSNWGL 363


>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 FLDQSWGM 10
F D WGM
Sbjct: 205 FTDTMWGM 212


>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 FLDQSWGM 10
F D WGM
Sbjct: 205 FTDTMWGM 212


>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 FLDQSWGM 10
F D WGM
Sbjct: 205 FTDTMWGM 212


>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain

Query: 3 FLDQSWG 9
F+D+ WG
Sbjct: 376 FVDRGWG 382


>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain

Query: 3 FLDQSWG 9
F+D+ WG
Sbjct: 376 FVDRGWG 382


>sp|UL79_HHV6Z|PROTEIN U52|Human herpesvirus 6B (strain Z29)

Query: 2 RFLDQSWG 9
RF ++ WG
Sbjct: 166 RFFNRFWG 173


>sp|UL79_HHV6U|PROTEIN U52|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 RFLDQSWG 9
RF ++ WG
Sbjct: 166 RFFNRFWG 173


>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)

Query: 2 RFLDQSWG 9
RFL Q W
Sbjct: 467 RFLAQLWA 474


>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)

Query: 2 RFLDQSWG 9
RFL Q W
Sbjct: 467 RFLAQLWA 474


>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 RFLDQSW 8
RFL Q W
Sbjct: 537 RFLTQLW 543


>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 RFLDQSW 8
RFL Q W
Sbjct: 537 RFLTQLW 543


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 3 FLDQSWG 9
F+D+ WG
Sbjct: 376 FVDRGWG 382


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 3 FLDQSWG 9
F+D+ WG
Sbjct: 376 FVDRGWG 382


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 3 FLDQSWG 9
F+D+ WG
Sbjct: 376 FVDRGWG 382


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 3 FLDQSWG 9
F+D+ WG
Sbjct: 383 FVDRGWG 389


>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)

Query: 2 RFLDQSWG 9
RFL Q W
Sbjct: 467 RFLAQLWA 474


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 4 LDQSWG 9
DQ WG
Sbjct: 464 FDQGWG 469


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 LDQSWG 9
DQ WG
Sbjct: 465 FDQGWG 470


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4 LDQSWG 9
DQ WG
Sbjct: 465 FDQGWG 470


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4 LDQSWG 9
DQ WG
Sbjct: 465 FDQGWG 470


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4 LDQSWG 9
DQ WG
Sbjct: 465 FDQGWG 470


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 LDQSWG 9
DQ WG
Sbjct: 465 FDQGWG 470


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4 LDQSWG 9
DQ WG
Sbjct: 465 FDQGWG 470


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 LDQSWG 9
DQ WG
Sbjct: 465 FDQGWG 470


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 LDQSWG 9
DQ WG
Sbjct: 465 FDQGWG 470


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4 LDQSWG 9
DQ WG
Sbjct: 465 FDQGWG 470


>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P

Query: 2 RFLDQSW 8
RFL SW
Sbjct: 8 RFLMSSW 14


>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)

Query: 5 DQSWGM 10
DQ WG+
Sbjct: 662 DQGWGV 667


>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)

Query: 4 LDQSWG 9
DQ WG
Sbjct: 466 FDQGWG 471


>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)

Query: 4 LDQSWG 9
DQ WG
Sbjct: 466 FDQGWG 471


>sp|EBNA2_EBVG|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4 LDQSW 8
LD+SW
Sbjct: 418 LDESW 422


>sp|EBNA2_EBVB9|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 LDQSW 8
LD+SW
Sbjct: 454 LDESW 458


>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4 LDQSW 8
LD+SW
Sbjct: 421 LDESW 425


>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)

Query: 4 LDQSWG 9
DQ WG
Sbjct: 465 FDQGWG 470


>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 3 FLDQSWG 9
F D+ WG
Sbjct: 390 FTDRGWG 396


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 3 FLDQSWG 9
F D+ WG
Sbjct: 390 FTDRGWG 396


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 3 FLDQSWG 9
F D+ WG
Sbjct: 390 FTDRGWG 396


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 3 FLDQSWG 9
F D+ WG
Sbjct: 390 FTDRGWG 396


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 3 FLDQSWG 9
F D+ WG
Sbjct: 318 FTDRGWG 324


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 3 FLDQSWG 9
F D+ WG
Sbjct: 390 FTDRGWG 396


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 3 FLDQSWG 9
F D+ WG
Sbjct: 390 FTDRGWG 396


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 3 FLDQSWG 9
F D+ WG
Sbjct: 390 FTDRGWG 396


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 3 FLDQSWG 9
F D+ WG
Sbjct: 390 FTDRGWG 396


>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)

Query: 4 LDQSWG 9
DQ WG
Sbjct: 465 FDQGWG 470




2|SequenceR|15|6|LSRWLARFLD

>sp|C8_VACCC|PROTEIN C8|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LSRWLARFLD 10
+++W A F+D
Sbjct: 75 MTKWCAPFID 84


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1 LSRWLARFL 9
S WL RF+
Sbjct: 1660 FSEWLDRFI 1668


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 1 LSRWLARFL 9
S WL RF+
Sbjct: 1660 FSEWLDRFI 1668


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 3 RWLARF 8
RW+A+F
Sbjct: 415 RWMAKF 420


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 3 RWLARF 8
RW+A+F
Sbjct: 415 RWMAKF 420


>sp|IR06_HCMVM|UNCHARACTERIZED protein IRL6|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 LSRWLARFLD 10
LSRW +D
Sbjct: 90 LSRWFGENMD 99


>sp|IR06_HCMVA|UNCHARACTERIZED protein IRL6|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 LSRWLARFLD 10
LSRW +D
Sbjct: 90 LSRWFGENMD 99


>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 RWLARF 8
RW +RF
Sbjct: 388 RWTSRF 393


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 4 WLARFL 9
WL RF+
Sbjct: 2389 WLIRFI 2394


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 4 WLARFL 9
WL RF+
Sbjct: 2409 WLIRFI 2414


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 4 WLARFL 9
WL RF+
Sbjct: 2439 WLIRFI 2444


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 4 WLARFL 9
WL RF+
Sbjct: 2389 WLIRFI 2394


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 4 WLARFL 9
WL RF+
Sbjct: 2409 WLIRFI 2414


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 4 WLARFL 9
WL RF+
Sbjct: 2439 WLIRFI 2444


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 3 RWLARFLD 10
RW+ FL+
Sbjct: 1332 RWMLAFLE 1339


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 3 RWLARFLD 10
RW+ FL+
Sbjct: 1333 RWMLAFLE 1340


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 3 RWLARFLD 10
RW+ FL+
Sbjct: 1332 RWMLAFLE 1339


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 1 LSRWLARFLD 10
L +W+ FLD
Sbjct: 1660 LMQWVDVFLD 1669




3|SequenceR|20|11|KVERSLSRWL

>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 1 KVERSLSRW 9
+V+R L RW
Sbjct: 79 RVDRMLGRW 87


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 1 KVERSLSRW 9
+V+R L RW
Sbjct: 79 RVDRMLGRW 87


>sp|US02_HHV2H|PROTEIN US2|Human herpesvirus 2 (strain HG52)

Query: 3 ERSLSRWL 10
ERS RWL
Sbjct: 208 ERSCLRWL 215


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 1 KVERSLSRWL 10
+VERSLS+ +
Sbjct: 1553 RVERSLSKGM 1562


>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain GD1)

Query: 4 RSLSRW 9
RSL RW
Sbjct: 238 RSLFRW 243


>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain

Query: 4 RSLSRW 9
RSL RW
Sbjct: 238 RSLFRW 243


>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain

Query: 4 RSLSRW 9
RSL RW
Sbjct: 238 RSLFRW 243


>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)

Query: 2 VERSLSR 8
VERSLS+
Sbjct: 314 VERSLSK 320


>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant

Query: 2 VERSLSR 8
VERSLS+
Sbjct: 314 VERSLSK 320


>sp|SH_MUMPJ|SMALL hydrophobic protein|Mumps virus genotype A (strain

Query: 3 ERSLSRW 9
+RS SRW
Sbjct: 45 QRSFSRW 51


>sp|SH_MUMPM|SMALL hydrophobic protein|Mumps virus genotype B (strain

Query: 3 ERSLSRW 9
+RS SRW
Sbjct: 45 QRSFSRW 51


>sp|SH_MUMPA|SMALL hydrophobic protein|Mumps virus (strain Matsuyama) (MuV)

Query: 3 ERSLSRW 9
+RS SRW
Sbjct: 45 QRSFSRW 51


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 1 KVERSLSR 8
++ERSLS+
Sbjct: 1553 RIERSLSK 1560


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 KVERSLSR 8
++ERSLS+
Sbjct: 1554 RIERSLSK 1561


>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 4 RSLSRWL 10
RSLS W+
Sbjct: 401 RSLSSWI 407


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1 KVERSLSRWL 10
K ER+++ WL
Sbjct: 1450 KEERAMALWL 1459


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1 KVERSLSRWL 10
K ER+++ WL
Sbjct: 1450 KEERAMALWL 1459


>sp|SH_MUMPK|SMALL hydrophobic protein|Mumps virus (strain Kilham) (MuV)

Query: 3 ERSLSRW 9
+RS SRW
Sbjct: 45 QRSFSRW 51




4|SequenceR|25|16|TGVHEKVERS

>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 TGVHEKVERS 10
TG+ +KV+++
Sbjct: 162 TGIRDKVQKA 171


>sp|GN_HHV8P|ENVELOPE glycoprotein N|Human herpesvirus 8 type P

Query: 1 TGVHEKVERS 10
TGV ERS
Sbjct: 26 TGVASSTERS 35


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 2 GVHEKVER 9
G H +VER
Sbjct: 261 GSHPRVER 268


>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P

Query: 1 TGVHEKVER 9
TG+ E +ER
Sbjct: 202 TGLREALER 210


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 3 VHEKVERS 10
+H+++ERS
Sbjct: 755 MHKRLERS 762


>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 1 TGVHEKVERS 10
TG+ KVER+
Sbjct: 130 TGLVVKVERA 139




5|SequenceR|30|21|NGFQDTGVHE

>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 1 NGFQDTGVH 9
NGF D G +
Sbjct: 319 NGFSDEGTY 327


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 NGFQDTGVH 9
NGF D G +
Sbjct: 319 NGFSDEGTY 327


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 NGFQDTGVH 9
NGF D G +
Sbjct: 319 NGFSDEGTY 327


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 1 NGFQDTGVH 9
NGF D G++
Sbjct: 745 NGFDDNGMN 753


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 4 QDTGVHE 10
Q TG HE
Sbjct: 8 QQTGTHE 14


>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)

Query: 1 NGFQDTGV 8
NGF TGV
Sbjct: 76 NGFTCTGV 83


>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)

Query: 1 NGFQDTGV 8
NGF TGV
Sbjct: 76 NGFTCTGV 83


>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)

Query: 1 NGFQDTGV 8
NGF TGV
Sbjct: 76 NGFTCTGV 83


>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)

Query: 1 NGFQDTGV 8
NGF TGV
Sbjct: 76 NGFTCTGV 83


>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins

Query: 1 NGFQDTGV 8
NGF TGV
Sbjct: 76 NGFTCTGV 83


>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)

Query: 1 NGFQDTGV 8
NGF TGV
Sbjct: 76 NGFTCTGV 83


>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)

Query: 1 NGFQDTGV 8
NGF TGV
Sbjct: 76 NGFTCTGV 83


>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 1 NGFQDTGV 8
NGF TGV
Sbjct: 76 NGFTCTGV 83


>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)

Query: 1 NGFQDTGV 8
NGF TGV
Sbjct: 76 NGFTCTGV 83


>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)

Query: 1 NGFQDTGV 8
NGF TGV
Sbjct: 76 NGFTCTGV 83


>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)

Query: 1 NGFQDTGV 8
NGF TGV
Sbjct: 76 NGFTCTGV 83


>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 1 NGFQDTGV 8
NGF TGV
Sbjct: 76 NGFTCTGV 83


>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)

Query: 1 NGFQDTGV 8
NGF TGV
Sbjct: 76 NGFTCTGV 83


>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1

Query: 3 FQDTGV 8
FQ+TGV
Sbjct: 53 FQETGV 58


>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain

Query: 3 FQDTGV 8
F DTGV
Sbjct: 54 FHDTGV 59


>sp|UORF_ZIKV|UORF protein|Zika virus (ZIKV)

Query: 1 NGFQDTGVHE 10
NGF DT + E
Sbjct: 55 NGFGDTSLFE 64


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 2 GFQDTGV 8
GF D GV
Sbjct: 1779 GFMDQGV 1785


>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41

Query: 2 GFQDTGVH 9
G DTG++
Sbjct: 155 GIDDTGIY 162




6|SequenceR|35|26|IYYYKNGFQD

>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)

Query: 2 YYYKNGF 8
+YY NG+
Sbjct: 302 HYYTNGY 308


>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69

Query: 1 IYYYKNGFQD 10
+Y+YK G +
Sbjct: 305 LYFYKTGLSN 314


>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26

Query: 1 IYYYKNGFQD 10
+Y+YK G +
Sbjct: 309 LYFYKTGLSN 318


>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16

Query: 1 IYYYKNGFQD 10
+Y+YK G +
Sbjct: 319 LYWYKTGISN 328


>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 1 IYYYKNGFQ 9
IY Y NG Q
Sbjct: 351 IYIYNNGVQ 359


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 2 YYYKNGF 8
Y Y++GF
Sbjct: 169 YLYRSGF 175


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 2 YYYKNGF 8
Y Y++GF
Sbjct: 169 YLYRSGF 175


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 2 YYYKNGF 8
Y Y++GF
Sbjct: 169 YLYRSGF 175


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 2 YYYKNGF 8
Y Y++GF
Sbjct: 169 YLYRSGF 175


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 2 YYYKNGF 8
Y Y++GF
Sbjct: 169 YLYRSGF 175


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 4 YKNGF 8
Y+NGF
Sbjct: 27 YRNGF 31


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 4 YKNGF 8
Y+NGF
Sbjct: 27 YRNGF 31


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d

Query: 4 YKNGF 8
Y+NGF
Sbjct: 27 YRNGF 31


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 4 YKNGF 8
Y+NGF
Sbjct: 27 YRNGF 31


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 4 YKNGF 8
Y+NGF
Sbjct: 27 YRNGF 31


>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort

Query: 2 YYYKNGFQ 9
++Y+ GF+
Sbjct: 495 FFYRYGFE 502


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 2 YYYKNGF 8
Y Y++GF
Sbjct: 169 YLYRSGF 175


>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P

Query: 2 YYYKNGFQD 10
++ K G+QD
Sbjct: 408 FFRKRGYQD 416


>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1 IYYYKN 6
+YY+KN
Sbjct: 143 VYYHKN 148


>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)

Query: 4 YKNGF 8
Y+NGF
Sbjct: 27 YRNGF 31


>sp|VE2_HPV1|REGULATORY protein E2|Human papillomavirus type 1 (Human

Query: 3 YYKNG 7
YY+NG
Sbjct: 138 YYQNG 142


>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63

Query: 3 YYKNG 7
YY+NG
Sbjct: 138 YYQNG 142




7|SequenceR|40|31|NKYQPIYYYK

>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 NKYQPIYYY 9
NKYQP + +
Sbjct: 95 NKYQPFFQW 103


>sp|PG036_MONPV|PROTEIN OPG036|Monkeypox virus (MPXV)

Query: 1 NKYQPIYYY 9
NKY+PIY Y
Sbjct: 144 NKYKPIYSY 152


>sp|PG036_VACCC|PROTEIN OPG036|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 NKYQPIYYY 9
NKY+P+Y Y
Sbjct: 144 NKYKPVYSY 152


>sp|PG036_VARV|PROTEIN OPG036|Variola virus

Query: 1 NKYQPIYYY 9
NKY+P+Y Y
Sbjct: 144 NKYKPVYSY 152


>sp|PG036_VAR67|PROTEIN OPG036|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 NKYQPIYYY 9
NKY+P+Y Y
Sbjct: 144 NKYKPVYSY 152


>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 YQPIYY 8
Y P+YY
Sbjct: 469 YTPVYY 474


Query: 1 NKYQPIYYYK 10
++ P+Y++K
Sbjct: 540 SRAHPVYFFK 549


>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3

Query: 2 KYQPIYYY 9
KYQPI+ Y
Sbjct: 268 KYQPIWDY 275


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 1 NKYQPIYY 8
N YQP+ Y
Sbjct: 794 NSYQPVQY 801


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 3 YQPIYYYK 10
+QPI Y++
Sbjct: 3019 FQPITYFQ 3026


>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 NKYQPIYYYK 10
N Y PIY K
Sbjct: 840 NSYAPIYLEK 849


>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P

Query: 2 KYQPIYYYK 10
+ P+Y++K
Sbjct: 540 RTHPVYFFK 548


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 2 KYQPIY 7
K+QP+Y
Sbjct: 1200 KFQPLY 1205


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 2 KYQPIY 7
K+QP+Y
Sbjct: 1200 KFQPLY 1205


>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P

Query: 1 NKYQPIYY 8
N Y P YY
Sbjct: 321 NPYDPWYY 328


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 2 KYQPIY 7
K+QP+Y
Sbjct: 1200 KFQPLY 1205


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 2 KYQPIY 7
K+QP+Y
Sbjct: 1200 KFQPLY 1205


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 2 KYQPIY 7
K+QP+Y
Sbjct: 1200 KFQPLY 1205


>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 NKYQPIYY 8
N+Y P++Y
Sbjct: 243 NRYTPLHY 250


>sp|UL132_HCMVT|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 NKYQPIYYY 9
N+ PI YY
Sbjct: 220 NEEDPIRYY 228


>sp|UL132_HCMVM|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 NKYQPIYYY 9
N+ PI YY
Sbjct: 220 NEEDPIRYY 228


>sp|UL132_HCMVA|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 NKYQPIYYY 9
N+ PI YY
Sbjct: 220 NEEDPIRYY 228


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3 YQPIYYYK 10
+QPI Y++
Sbjct: 3019 FQPITYFQ 3026


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 YQPIYYY 9
YQ YY+
Sbjct: 2185 YQKFYYF 2191


>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3

Query: 2 KYQPIYY 8
K QP+YY
Sbjct: 55 KEQPVYY 61


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 YQPIYYY 9
YQ YY+
Sbjct: 2187 YQKFYYF 2193


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 2 KYQPIYY 8
+Y P+Y+
Sbjct: 657 RYTPVYW 663


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 2 KYQPIYY 8
+Y P+Y+
Sbjct: 657 RYTPVYW 663


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 YQPIYYY 9
YQ YY+
Sbjct: 2187 YQKFYYF 2193


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 YQPIYYY 9
YQ YY+
Sbjct: 2187 YQKFYYF 2193


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 YQPIYYY 9
YQ YY+
Sbjct: 2187 YQKFYYF 2193


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 YQPIYYY 9
YQ YY+
Sbjct: 2187 YQKFYYF 2193


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 YQPIYYY 9
YQ YY+
Sbjct: 2187 YQKFYYF 2193


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 YQPIYYY 9
YQ YY+
Sbjct: 2021 YQKFYYF 2027


>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 NKYQPIYYYK 10
N Y P+Y K
Sbjct: 840 NSYAPVYLEK 849


>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 NKYQPIYYYK 10
N Y P+Y K
Sbjct: 840 NSYAPVYLEK 849


>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 NKYQPIYYYK 10
N Y P+Y K
Sbjct: 840 NSYAPVYLEK 849


>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 QPIYYYK 10
P+Y++K
Sbjct: 561 HPVYFFK 567


>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 1 NKYQPIYYYK 10
N Y P+Y K
Sbjct: 840 NSYAPVYLEK 849


>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 NKYQPIYYYK 10
N Y P+Y K
Sbjct: 840 NSYAPVYLEK 849


>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 QPIYYYK 10
P+Y++K
Sbjct: 561 HPVYFFK 567


>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 NKYQPIYYYK 10
N Y P+Y K
Sbjct: 840 NSYAPVYLEK 849


>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4 QPIYYYK 10
P+Y++K
Sbjct: 561 HPVYFFK 567


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1 NKYQPIYYYK 10
N Y P Y+K
Sbjct: 351 NYYNPRVYFK 360


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank

Query: 1 NKYQPIYYYK 10
N Y P Y+K
Sbjct: 351 NYYNPRVYFK 360


>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41

Query: 4 QPIYY 8
QP+YY
Sbjct: 565 QPLYY 569


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 1 NKYQPIYYYK 10
N Y P Y+K
Sbjct: 351 NYYNPRAYFK 360




8|SequenceR|45|36|TQGRWNKYQP

>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)

Query: 1 TQGRWNKY 8
TQ RWN Y
Sbjct: 156 TQPRWNYY 163


>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)

Query: 1 TQGRWNKY 8
TQ RWN Y
Sbjct: 156 TQPRWNYY 163


>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)

Query: 1 TQGRWNKY 8
TQ RWN Y
Sbjct: 156 TQPRWNYY 163


>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)

Query: 1 TQGRWNKY 8
TQ RWN Y
Sbjct: 156 TQPRWNYY 163


>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)

Query: 1 TQGRWNKY 8
TQ RWN Y
Sbjct: 156 TQPRWNYY 163


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 4 RWNKYQ 9
+WNKY+
Sbjct: 214 KWNKYK 219


>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)

Query: 1 TQGRWNKY 8
TQ RWN Y
Sbjct: 155 TQPRWNYY 162


>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 TQGRWNKY 8
T+ RWNK+
Sbjct: 170 TEDRWNKH 177


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1 TQGRWN 6
T+G+WN
Sbjct: 1110 TKGKWN 1115


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1 TQGRWN 6
T+G+WN
Sbjct: 1110 TKGKWN 1115


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 1 TQGRWN 6
T+G+WN
Sbjct: 1110 TKGKWN 1115


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1 TQGRWN 6
T+G+WN
Sbjct: 1110 TKGKWN 1115


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 TQGRWN 6
T+G+WN
Sbjct: 1110 TKGKWN 1115


>sp|VE6_HPV60|PROTEIN E6|Human papillomavirus type 60

Query: 2 QGRWNKY 8
+GRW Y
Sbjct: 129 RGRWRSY 135


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 2 QGRWN 6
+GRWN
Sbjct: 244 EGRWN 248


>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 5 WNKYQP 10
WN+Y P
Sbjct: 46 WNEYAP 51


>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 GRWNKYQP 10
G W K QP
Sbjct: 257 GAWQKVQP 264


>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)

Query: 3 GRWNKYQP 10
G W K QP
Sbjct: 257 GAWQKVQP 264


>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)

Query: 3 GRWNKYQP 10
G W K QP
Sbjct: 257 GAWQKVQP 264


>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 3 GRWNKYQP 10
G W KY+P
Sbjct: 155 GIWVKYKP 162


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 5 WNKYQP 10
WN QP
Sbjct: 2177 WNTLQP 2182


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 5 WNKYQP 10
WN QP
Sbjct: 2177 WNTLQP 2182


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 3 GRWNKY 8
G+WN Y
Sbjct: 746 GKWNDY 751


>sp|GJ_HHV11|ENVELOPE glycoprotein J|Human herpesvirus 1 (strain 17)

Query: 5 WNKYQP 10
W +Y P
Sbjct: 80 WGRYHP 85


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 2 QGRWNKYQ 9
QG W YQ
Sbjct: 802 QGLWKGYQ 809


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 5 WNKYQP 10
WN+ QP
Sbjct: 758 WNEQQP 763


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 5 WNKYQP 10
WN+ QP
Sbjct: 758 WNEQQP 763


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 5 WNKYQP 10
WN+ QP
Sbjct: 759 WNEQQP 764


>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 TQGRWNKYQ 9
T+G W K Q
Sbjct: 355 TRGIWEKVQ 363


>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 5 WNKYQP 10
WN+ QP
Sbjct: 758 WNEQQP 763


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 TQGRW 5
T GRW
Sbjct: 3000 TSGRW 3004


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 TQGRW 5
T GRW
Sbjct: 2977 TSGRW 2981


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 TQGRW 5
T GRW
Sbjct: 2977 TSGRW 2981


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 5 WNKYQP 10
WN+ QP
Sbjct: 759 WNEQQP 764


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 TQGRW 5
T GRW
Sbjct: 3000 TSGRW 3004


>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United

Query: 1 TQGRWNKYQ 9
++G W YQ
Sbjct: 189 SEGNWIDYQ 197


>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)

Query: 5 WNKYQP 10
WN Y P
Sbjct: 101 WNTYGP 106


>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 1 TQGRWNKYQP 10
T G KY P
Sbjct: 487 TSGSMKKYSP 496


>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann

Query: 5 WNKYQP 10
WN Y P
Sbjct: 101 WNTYGP 106


>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)

Query: 5 WNKYQP 10
WN Y P
Sbjct: 101 WNTYGP 106


>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann

Query: 5 WNKYQP 10
WN Y P
Sbjct: 101 WNTYGP 106


>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)

Query: 1 TQGRWNKYQP 10
T G KY P
Sbjct: 485 TSGSMKKYSP 494


>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 4 RWNKY 8
RW KY
Sbjct: 536 RWEKY 540


>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)

Query: 1 TQGRWNKYQP 10
T G KY P
Sbjct: 485 TSGSMKKYSP 494


>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 TQGRWNKYQP 10
TQG W+ P
Sbjct: 821 TQGPWDPRAP 830


>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)

Query: 3 GRWNKY 8
G+W KY
Sbjct: 531 GKWPKY 536


>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)

Query: 3 GRWNKY 8
G+W KY
Sbjct: 530 GKWPKY 535


>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann

Query: 3 GRWNKY 8
G+W KY
Sbjct: 531 GKWPKY 536


>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann

Query: 3 GRWNKY 8
G+W KY
Sbjct: 531 GKWPKY 536


>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)

Query: 3 GRWNKY 8
G+W KY
Sbjct: 531 GKWPKY 536




9|SequenceR|50|41|RKERITQGRW

>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1 RKERITQGR 9
+KE+I QG+
Sbjct: 1955 KKEKIAQGK 1963


>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7

Query: 2 KERITQGRW 10
+ +ITQ RW
Sbjct: 301 RAKITQNRW 309


>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 RKERITQGR 9
R +R+TQGR
Sbjct: 118 RVDRLTQGR 126


>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 RKERITQGR 9
R +R+TQGR
Sbjct: 118 RVDRLTQGR 126


>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 RKERITQGR 9
R +R+TQGR
Sbjct: 118 RVDRLTQGR 126


>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 RKERITQGR 9
R +R+TQGR
Sbjct: 118 RVDRLTQGR 126


>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port

Query: 1 RKERITQGR 9
R +R+TQGR
Sbjct: 118 RVDRLTQGR 126


>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 RKERITQGR 9
R +R+TQGR
Sbjct: 118 RVDRLTQGR 126


>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 RKERITQGR 9
R +R+TQGR
Sbjct: 118 RVDRLTQGR 126


>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 RKERITQGR 9
R +R+TQGR
Sbjct: 118 RVDRLTQGR 126


>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 1 RKERITQGR 9
R +R+TQGR
Sbjct: 118 RVDRLTQGR 126


>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 RKERITQGR 9
R +R+TQGR
Sbjct: 118 RVDRLTQGR 126


>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 RKERITQGR 9
R +R+TQGR
Sbjct: 118 RVDRLTQGR 126


>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 RKERITQGR 9
R +R+TQGR
Sbjct: 118 RVDRLTQGR 126


>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 RKERITQGR 9
R +R+TQGR
Sbjct: 118 RVDRLTQGR 126


>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 RKERITQGR 9
R +R+TQGR
Sbjct: 118 RVDRLTQGR 126


>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4

Query: 2 KERITQGRW 10
+ ++TQ RW
Sbjct: 295 RAKVTQNRW 303


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 4 RITQGR 9
R+TQGR
Sbjct: 1019 RVTQGR 1024


>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 4 RITQGR 9
R+TQGR
Sbjct: 1019 RVTQGR 1024


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 4 RITQGR 9
R+TQGR
Sbjct: 1019 RVTQGR 1024


>sp|YLR3_EBVP3|UNCHARACTERIZED protein BLRF3|Epstein-Barr virus (strain P3HR-1) (HHV-4)

Query: 2 KERITQGRW 10
+ER ++G W
Sbjct: 25 QERASEGDW 33


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 4 RITQGR 9
R+TQGR
Sbjct: 1019 RVTQGR 1024


>sp|UL07_HCMVA|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 ITQGRW 10
+TQ RW
Sbjct: 12 VTQSRW 17


>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)

Query: 3 ERITQGRW 10
ERI GR+
Sbjct: 91 ERIADGRY 98


>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 ERITQGRW 10
ERI GR+
Sbjct: 91 ERIADGRY 98


>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 RITQGRW 10
R+T G W
Sbjct: 286 RVTHGNW 292


>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 RITQGRW 10
R+T G W
Sbjct: 286 RVTHGNW 292


>sp|UL08_HCMVA|MEMBRANE protein UL8|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 ITQGRW 10
+TQ RW
Sbjct: 12 VTQSRW 17


>sp|VE4_HPV2A|PROTEIN E4|Human papillomavirus type 2a

Query: 2 KERITQGRW 10
+ER +G+W
Sbjct: 78 RERSERGKW 86


>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 KERITQGRW 10
+ER ++G W
Sbjct: 25 QERASEGDW 33


>sp|VIF_HV1MV|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 3 ERITQGRW 10
+R+T+ RW
Sbjct: 167 QRLTEDRW 174




10|SequenceR|55|46|AAEVIRKERI

>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 AAEVIRKER 9
AAE++RK R
Sbjct: 2271 AAEILRKSR 2279


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 AAEVIRKER 9
AAE++RK +
Sbjct: 2271 AAEILRKSK 2279


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 AEVIRKER 9
AE++RK R
Sbjct: 2272 AEILRKSR 2279


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 AEVIRKER 9
AE++RK R
Sbjct: 2272 AEILRKSR 2279


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2 AEVIRKER 9
AE++RK R
Sbjct: 2272 AEILRKSR 2279


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2 AEVIRKER 9
AE++RK R
Sbjct: 2272 AEILRKSR 2279


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 AAEVIRKER 9
AAE++RK +
Sbjct: 2271 AAEILRKTK 2279


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 AEVIRKER 9
AE++RK R
Sbjct: 2272 AEILRKPR 2279


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 EVIRKERI 10
E+I+KER+
Sbjct: 1121 ELIKKERV 1128


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 EVIRKERI 10
E+I+KER+
Sbjct: 1121 ELIKKERV 1128


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 EVIRKERI 10
++I+KERI
Sbjct: 1106 QLIKKERI 1113




11|SequenceR|60|51|VEKKNAAEVI

>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 EKKNAAEVI 10
EKK AEV+
Sbjct: 158 EKKFGAEVV 166


>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 EKKNAAEVI 10
EKK AEV+
Sbjct: 163 EKKFGAEVV 171


>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus

Query: 1 VEKKNAAE 8
V KK+AAE
Sbjct: 246 VTKKSAAE 253


>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus

Query: 1 VEKKNAAE 8
V KK+AAE
Sbjct: 247 VTKKSAAE 254


>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 EKKNAAEVI 10
EKK AEV+
Sbjct: 163 EKKFGAEVV 171


>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 EKKNAAEVI 10
EKK AEV+
Sbjct: 158 EKKFGAEVV 166


>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 EKKNAAEVI 10
EKK AEV+
Sbjct: 158 EKKFGAEVV 166


>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 EKKNAAEVI 10
EKK AEV+
Sbjct: 163 EKKFGAEVV 171


>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 EKKNAAEVI 10
EKK AEV+
Sbjct: 163 EKKFGAEVV 171


>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 EKKNAAEVI 10
EKK AEV+
Sbjct: 161 EKKFGAEVV 169


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 EKKNAAEVI 10
+K+N AE+I
Sbjct: 745 KKENCAEII 753


>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 EKKNAAEVI 10
EKK AEV+
Sbjct: 163 EKKFGAEVV 171


>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 EKKNAAEVI 10
EKK AEV+
Sbjct: 163 EKKFGAEVV 171




12|SequenceR|65|56|GAEYDVEKKN

>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 3 EYDVEKKN 10
EY+V KKN
Sbjct: 3939 EYEVAKKN 3946


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 3 EYDVEKKN 10
EY+V KKN
Sbjct: 3977 EYEVAKKN 3984


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 3 EYDVEKKN 10
EY+V KKN
Sbjct: 3997 EYEVAKKN 4004


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 3 EYDVEKKN 10
EY+V KKN
Sbjct: 4027 EYEVAKKN 4034


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3 EYDVEKKN 10
EY+V KKN
Sbjct: 3939 EYEVAKKN 3946


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3 EYDVEKKN 10
EY+V KKN
Sbjct: 3977 EYEVAKKN 3984


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3 EYDVEKKN 10
EY+V KKN
Sbjct: 3997 EYEVAKKN 4004


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3 EYDVEKKN 10
EY+V KKN
Sbjct: 4027 EYEVAKKN 4034


>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)

Query: 1 GAEYDVEKKN 10
G YDV K+N
Sbjct: 147 GHVYDVRKEN 156


>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 GAEYDVEKKN 10
G YDV K+N
Sbjct: 160 GNVYDVNKEN 169


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 2 AEYDVE 7
AEYD+E
Sbjct: 2802 AEYDLE 2807


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 1 GAEYDV 6
GAE+DV
Sbjct: 1373 GAEFDV 1378


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 2 AEYDVE 7
AEYDV+
Sbjct: 1043 AEYDVQ 1048


>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33

Query: 3 EYDVEKKN 10
+YD +KKN
Sbjct: 120 QYDNDKKN 127


>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 4 YDVEK 8
YDVEK
Sbjct: 1165 YDVEK 1169


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 2 AEYDVEK 8
EYD++K
Sbjct: 690 GEYDIDK 696




13|SequenceR|70|61|ETPIDGAEYD

>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 ETPIDGAEY 9
ETP++ AEY
Sbjct: 146 ETPVEYAEY 154


>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 ETPIDGAEY 9
ETP++ AEY
Sbjct: 146 ETPVEYAEY 154


>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 ETPIDGAEY 9
ETP++ AEY
Sbjct: 146 ETPVEYAEY 154


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 1 ETPIDGAEY 9
ETP+D EY
Sbjct: 144 ETPLDFTEY 152


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 3 PIDGAEY 9
P+DG EY
Sbjct: 654 PVDGMEY 660


>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 3 PIDGAEY 9
P+DG EY
Sbjct: 654 PVDGMEY 660


>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus

Query: 3 PIDGAEYD 10
PI+G YD
Sbjct: 371 PINGISYD 378


>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)

Query: 3 PIDGAEYD 10
PI+G YD
Sbjct: 371 PINGISYD 378


>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 PIDGAEYD 10
PI+G YD
Sbjct: 371 PINGISYD 378


>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 PIDGAEY 9
PID A Y
Sbjct: 181 PIDNASY 187


>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)

Query: 3 PIDGAEY 9
P++G EY
Sbjct: 645 PVEGVEY 651


>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 ETPIDGAE 8
E P+DG E
Sbjct: 7 EEPMDGFE 14


>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PIDGAE 8
PI+GAE
Sbjct: 1021 PIEGAE 1026


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 3 PIDGAEYD 10
P+D YD
Sbjct: 1206 PMDAGRYD 1213


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 3 PIDGAEYD 10
P+D YD
Sbjct: 1206 PMDAGRYD 1213


>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5

Query: 1 ETPIDGAEYD 10
ETP G+ YD
Sbjct: 687 ETPSLGSGYD 696


>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 1 ETPIDGAEYD 10
ETP G+ YD
Sbjct: 703 ETPSLGSGYD 712




14|SequenceR|75|66|IWAEWETPID

>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE ID
Sbjct: 619 WMEWEREID 627


>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE ID
Sbjct: 618 WMEWEREID 626


>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE ID
Sbjct: 624 WMEWEREID 632


>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE ID
Sbjct: 625 WMEWEREID 633


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE ID
Sbjct: 625 WMEWEREID 633


>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE ID
Sbjct: 625 WMEWEREID 633


>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE ID
Sbjct: 628 WMEWEREID 636


>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE ID
Sbjct: 627 WMEWEREID 635


>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE ID
Sbjct: 619 WMEWEREID 627


>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE ID
Sbjct: 628 WMEWEREID 636


>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE ID
Sbjct: 624 WMEWEREID 632


>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE ID
Sbjct: 639 WMEWEREID 647


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1 IW--AEWETPID 10
IW EW++P+D
Sbjct: 65 IWRSKEWDSPLD 76


>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE ID
Sbjct: 635 WIEWEREID 643


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1 IW--AEWETPID 10
IW EW++P+D
Sbjct: 65 IWRSKEWDSPLD 76


>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W +WE ID
Sbjct: 615 WMQWEKEID 623


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 3 AEWETP 8
+EW+TP
Sbjct: 72 SEWQTP 77


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 4 EWETPID 10
EW P+D
Sbjct: 2158 EWNIPVD 2164


>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W +WE ID
Sbjct: 637 WMQWEREID 645


>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W +WE ID
Sbjct: 627 WMQWEREID 635


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W +WE ID
Sbjct: 629 WMQWEREID 637


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1 IWAEWETPID 10
+W E E+P D
Sbjct: 2022 LWLETESPCD 2031


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 IWAEWETPID 10
+W E E+P D
Sbjct: 2044 LWLETESPCD 2053


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 1 IWAEWETPID 10
+W E E+P D
Sbjct: 2017 LWLETESPCD 2026


>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W +WE ID
Sbjct: 627 WMQWEREID 635


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 4 EWETP 8
EW+TP
Sbjct: 73 EWQTP 77


>sp|NSP4_ROTH3|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain

Query: 2 WAEWETPID 10
WAE E P +
Sbjct: 159 WAEGENPYE 167


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE I+
Sbjct: 620 WMEWEKEIE 628


>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EW+ ID
Sbjct: 640 WMEWDREID 648


>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)

Query: 2 WAEWET 7
WA WET
Sbjct: 288 WAFWET 293


>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)

Query: 2 WAEWET 7
WA WET
Sbjct: 288 WAFWET 293


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 4 EWETP 8
EW+TP
Sbjct: 73 EWQTP 77


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 4 EWETP 8
EW+TP
Sbjct: 73 EWQTP 77


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 4 EWETP 8
EW+TP
Sbjct: 75 EWQTP 79


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 4 EWETP 8
EW+TP
Sbjct: 73 EWQTP 77


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 4 EWETP 8
EW+TP
Sbjct: 73 EWQTP 77


>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2 WAEWET 7
WA WET
Sbjct: 288 WAFWET 293


>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2 WAEWET 7
WA WET
Sbjct: 288 WAFWET 293


>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 2 WAEWET 7
WA WET
Sbjct: 288 WAFWET 293


>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 2 WAEWET 7
WA WET
Sbjct: 288 WAFWET 293


>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W +WE ID
Sbjct: 615 WMKWEREID 623


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 4 EWETP 8
EW+TP
Sbjct: 75 EWQTP 79


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 4 EWETP 8
EW+TP
Sbjct: 75 EWQTP 79


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 4 EWETP 8
EW+TP
Sbjct: 73 EWQTP 77


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 4 EWETP 8
EW+TP
Sbjct: 75 EWQTP 79


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 4 EWETP 8
EW+TP
Sbjct: 75 EWQTP 79


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 4 EWETP 8
EW+TP
Sbjct: 75 EWQTP 79


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 4 EWETP 8
EW+TP
Sbjct: 73 EWQTP 77


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 4 EWETP 8
EW+TP
Sbjct: 75 EWQTP 79


>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPI 9
W EWE I
Sbjct: 604 WMEWEKEI 611


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 4 EWETP 8
EW+TP
Sbjct: 73 EWQTP 77


>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)

Query: 2 WAEWET 7
WA WET
Sbjct: 289 WAFWET 294


>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EWE I+
Sbjct: 634 WMEWEREIN 642


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 4 EWETP 8
EW+TP
Sbjct: 75 EWQTP 79


>sp|C_PI1HE|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1 IWAEWETP 8
IWA ETP
Sbjct: 124 IWAMKETP 131


>sp|C_PI1HC|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1 IWAEWETP 8
IWA ETP
Sbjct: 124 IWAMKETP 131


>sp|C_PI1HB|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1 IWAEWETP 8
IWA ETP
Sbjct: 124 IWAMKETP 131


>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain

Query: 2 WAEWET 7
WA WET
Sbjct: 289 WAFWET 294


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPI 9
W EWE I
Sbjct: 622 WMEWEKEI 629


>sp|C_PI1HD|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1 IWAEWETP 8
IWA ETP
Sbjct: 124 IWAMKETP 131


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 2 WAEWET 7
W +W+T
Sbjct: 1847 WNDWQT 1852


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 2 WAEWET 7
W +W+T
Sbjct: 1847 WNDWQT 1852


>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)

Query: 2 WAEWE 6
WAEW+
Sbjct: 129 WAEWK 133


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 4 EWETP 8
EW+TP
Sbjct: 73 EWQTP 77


>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 2 WAEWET 7
WA WET
Sbjct: 289 WAFWET 294


>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2 WAEWET 7
WA WET
Sbjct: 289 WAFWET 294


>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 2 WAEWET 7
WA WET
Sbjct: 289 WAFWET 294


>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2 WAEWET 7
WA WET
Sbjct: 289 WAFWET 294


>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2 WAEWET 7
WA WET
Sbjct: 289 WAFWET 294


>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P

Query: 3 AEWETPI 9
A+WE P+
Sbjct: 178 AQWEIPL 184


>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPI 9
W EWE I
Sbjct: 614 WMEWEKEI 621


>sp|PRO_ADE04|PROTEASE adenovirus E serotype 4

Query: 5 WETPID 10
W TP+D
Sbjct: 133 WPTPMD 138


>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2 WAEWET 7
WA WET
Sbjct: 289 WAFWET 294


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 IWAEW 5
+W EW
Sbjct: 1667 VWREW 1671


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 IWAEW 5
+W EW
Sbjct: 1667 VWREW 1671


>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPI 9
W EWE I
Sbjct: 614 WLEWEREI 621


>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPI 9
W EWE +
Sbjct: 618 WMEWEKEV 625


>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 WAEWETPI 9
W EWE I
Sbjct: 617 WQEWEQRI 624


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 2 WAEWE 6
WA WE
Sbjct: 3203 WASWE 3207


>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 2 WAEWETPID 10
W +WE ++
Sbjct: 146 WEDWELALN 154


>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen

Query: 4 EWETP 8
EWE P
Sbjct: 287 EWENP 291


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 2 WAEWET 7
W +WE+
Sbjct: 3211 WTDWES 3216


>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 WAEWETPI 9
W EWE I
Sbjct: 617 WQEWEQRI 624


>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus

Query: 4 EWETP 8
EWE P
Sbjct: 290 EWENP 294


>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate

Query: 4 EWETP 8
EWE P
Sbjct: 290 EWENP 294


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 IWAEW 5
+W+EW
Sbjct: 2285 VWSEW 2289


>sp|SPI2B_VACCC|PUTATIVE serine proteinase inhibitor 2|Vaccinia virus (strain Copenhagen)

Query: 3 AEWETPID 10
A+W TP +
Sbjct: 15 AKWLTPFE 22


>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 WAEWETPI 9
W EWE I
Sbjct: 615 WQEWEHKI 622


>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 WAEWETPI 9
W EWE +
Sbjct: 614 WQEWEQKV 621


>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 WAEWETPI 9
W EWE +
Sbjct: 623 WQEWEKQV 630


>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 WAEWETPI 9
W EWE +
Sbjct: 614 WQEWEKQV 621


>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain

Query: 4 EWETP 8
EWE P
Sbjct: 289 EWENP 293


>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 WAEWETPI 9
W EWE +
Sbjct: 622 WQEWEKQV 629


>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 WAEWETPI 9
W EWE +
Sbjct: 624 WQEWEQKV 631


>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)

Query: 4 EWETP 8
EWE P
Sbjct: 287 EWENP 291


>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EW+ I+
Sbjct: 631 WMEWDKQIN 639


>sp|CAHH_VARV|CELL surface-binding protein OPG105|Variola virus

Query: 1 IWAEWETPID 10
+W + TPI+
Sbjct: 181 VWIIFPTPIN 190


>sp|CAHH_VAR67|CELL surface-binding protein OPG105|Variola virus (isolate

Query: 1 IWAEWETPID 10
+W + TPI+
Sbjct: 181 VWIIFPTPIN 190


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 2 WAEWET 7
W +WE+
Sbjct: 3192 WTDWES 3197


>sp|MATRX_ABLVB|MATRIX protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2 WAEWETPID 10
WAE P+D
Sbjct: 134 WAESRGPLD 142


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 4 EWETP 8
+W+TP
Sbjct: 73 QWQTP 77


>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)

Query: 1 IWAEW 5
IW EW
Sbjct: 416 IWLEW 420


>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 WAEWE 6
W EWE
Sbjct: 613 WQEWE 617


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 4 EWETP 8
+W+TP
Sbjct: 73 DWQTP 77


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 4 EWETP 8
+W+TP
Sbjct: 73 QWQTP 77


>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPI 9
W +WE I
Sbjct: 623 WMQWEKEI 630


>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EW+ I+
Sbjct: 626 WMEWDREIN 634


>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EW+ I+
Sbjct: 628 WMEWDREIN 636


>sp|CAHH_VACCA|CELL surface-binding protein OPG105|Vaccinia virus (strain Ankara)

Query: 1 IWAEWETPID 10
+W + TPI+
Sbjct: 181 VWIIFPTPIN 190


>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W +WE I+
Sbjct: 620 WIQWEREIN 628


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2 WAEWE 6
WA+W+
Sbjct: 3228 WADWQ 3232


>sp|CAHH_VACCC|CELL surface-binding protein OPG105|Vaccinia virus (strain Copenhagen)

Query: 1 IWAEWETPID 10
+W + TPI+
Sbjct: 181 VWIIFPTPIN 190


>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 2 WAEWE 6
W WE
Sbjct: 50 WGSWE 54


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 5 WETPID 10
WE P D
Sbjct: 1719 WENPSD 1724


>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EW+ I+
Sbjct: 623 WMEWDREIN 631


>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain

Query: 5 WETP 8
WETP
Sbjct: 27 WETP 30


>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180

Query: 1 IWAEWETPID 10
I W TP++
Sbjct: 398 IGTAWNTPVN 407


>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain

Query: 5 WETP 8
WETP
Sbjct: 27 WETP 30


>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W +WE I+
Sbjct: 622 WIQWEREIN 630


>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPI 9
W +WE I
Sbjct: 630 WMQWEKEI 637


>sp|CAHH_VACCT|CELL surface-binding protein OPG105|Vaccinia virus (strain Tian Tan)

Query: 1 IWAEWETPID 10
+W + TPI+
Sbjct: 181 VWIIFPTPIN 190


>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 2 WAEWETPID 10
WAE P+D
Sbjct: 124 WAESRGPLD 132


>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EW+ I+
Sbjct: 628 WMEWDREIN 636


>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EW+ I+
Sbjct: 628 WMEWDREIN 636


>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WAEWETPID 10
W EW+ I+
Sbjct: 628 WMEWDREIN 636




15|SequenceR|80|71|KRTRRIWAEW

>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 4 RRIWAE 9
RRIWAE
Sbjct: 1078 RRIWAE 1083


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 1 KRTRRIWAEW 10
+ TRR W EW
Sbjct: 74 RYTRRHWIEW 83


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 1 KRTRRIWAEW 10
+ TRR W EW
Sbjct: 74 RYTRRHWIEW 83


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 1 KRTRRIWAEW 10
+ TRR W EW
Sbjct: 74 RYTRRHWIEW 83


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 1 KRTRRIWAEW 10
+ TRR W EW
Sbjct: 74 RYTRRHWIEW 83


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 1 KRTRRIWAEW 10
+ TRR W EW
Sbjct: 74 RYTRRHWIEW 83


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 1 KRTRRIWAEW 10
+ TRR W EW
Sbjct: 74 RYTRRHWIEW 83


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 1 KRTRRIWAEW 10
+ TRR W EW
Sbjct: 74 RYTRRHWIEW 83


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 1 KRTRRIWAEW 10
+ TRR W EW
Sbjct: 74 RYTRRHWIEW 83


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 1 KRTRRIWAEW 10
+ TRR W EW
Sbjct: 74 RYTRRHWIEW 83


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 4 RRIWAEW 10
R +W EW
Sbjct: 1665 RMVWREW 1671


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 4 RRIWAEW 10
R +W EW
Sbjct: 1665 RMVWREW 1671


>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)

Query: 3 TRRIW 7
TRRIW
Sbjct: 5 TRRIW 9


>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)

Query: 3 TRRIW 7
TRRIW
Sbjct: 5 TRRIW 9


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 2 RTRRIW 7
RTRR W
Sbjct: 635 RTRRKW 640


>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus

Query: 4 RRIWAEW 10
R++W +W
Sbjct: 374 RQLWDQW 380


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 5 RIWAEW 10
R+W+EW
Sbjct: 2284 RVWSEW 2289


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1 KRTRRIWAE 9
RTR WAE
Sbjct: 3381 SRTRATWAE 3389


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 2 RTRRIWAE 9
RTR WAE
Sbjct: 3383 RTRATWAE 3390


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2 RTRRIWAE 9
RTR WAE
Sbjct: 3384 RTRATWAE 3391


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 2 RTRRIWAE 9
RTR WAE
Sbjct: 3388 RTRATWAE 3395


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 2 RTRRIWAE 9
RTR WAE
Sbjct: 3388 RTRATWAE 3395


>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 4 RRIWAEW 10
R +W +W
Sbjct: 370 RELWEDW 376


>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)

Query: 6 IWAEW 10
IWA+W
Sbjct: 431 IWADW 435


>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 4 RRIWAEW 10
R +W +W
Sbjct: 370 RELWEDW 376


>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40

Query: 4 RRIWAE 9
RR+W E
Sbjct: 429 RRLWGE 434


>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 4 RRIWAEW 10
R +W +W
Sbjct: 370 RELWDDW 376


>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 4 RRIWAEW 10
R +W +W
Sbjct: 370 RELWDDW 376


>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 4 RRIWAEW 10
R +W +W
Sbjct: 370 RELWDDW 376


>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 4 RRIWAEW 10
R +W +W
Sbjct: 370 RELWDDW 376


>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)

Query: 6 IWAEW 10
IW EW
Sbjct: 416 IWLEW 420


>sp|VP6_ROTGA|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Human/China/ADRV/1982)

Query: 3 TRRIWAE 9
T+R+W +
Sbjct: 372 TQRVWCQ 378


>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28

Query: 4 RRIWA 8
RR+WA
Sbjct: 627 RRLWA 631




16|SequenceR|85|76|MTPPTKRTRR

>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)

Query: 4 PTKRTR 9
PTKRTR
Sbjct: 122 PTKRTR 127


>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b

Query: 2 TPPTKRTR 9
TPP KR R
Sbjct: 234 TPPRKRAR 241


>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)

Query: 2 TPPTKRTR 9
T PTKR R
Sbjct: 388 TSPTKRCR 395


>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a

Query: 2 TPPTKRTR 9
TPP KR R
Sbjct: 234 TPPRKRAR 241


>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45

Query: 2 TPPTKRTRR 10
TP TKR R+
Sbjct: 245 TPATKRPRQ 253


>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32

Query: 2 TPPTKRTRR 10
TPP KR R+
Sbjct: 256 TPPRKRYRQ 264


>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 TPPTKRTRR 10
T P+K TRR
Sbjct: 309 TRPSKTTRR 317


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 1 MTPPTKRTR 9
+T P RTR
Sbjct: 1213 LTEPKSRTR 1221


>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A

Query: 2 TPPTK-RTRR 10
TPPT R RR
Sbjct: 100 TPPTNNRARR 109


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 2 TPPTKR 7
TPPT R
Sbjct: 532 TPPTAR 537


>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 TPPTKRTR 9
T PTKR +
Sbjct: 388 TSPTKRCK 395


>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 PPTKRTR 9
PPTK+ R
Sbjct: 434 PPTKKAR 440


>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25

Query: 2 TPPTKRTRR 10
+P +KR+RR
Sbjct: 371 SPTSKRSRR 379


>sp|CEP3_HHV2H|CYTOPLASMIC envelopment protein 3|Human herpesvirus 2 (strain HG52)

Query: 3 PPTKRTRR 10
PP++ TRR
Sbjct: 69 PPSRHTRR 76


>sp|W_NIPAV|PROTEIN W|Nipah virus

Query: 3 PPTKRTR 9
PPTK+ R
Sbjct: 436 PPTKKAR 442


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 2 TPPTKRTRR 10
T P RTRR
Sbjct: 786 TSPPPRTRR 794


>sp|PAX_I47A0|PROTEIN PA-X|Influenza A virus (strain A/Fort

Query: 2 TPPTKRTRR 10
T PTK +RR
Sbjct: 213 TSPTKVSRR 221


>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)

Query: 1 MTPPTKR 7
+ PPTK+
Sbjct: 69 LKPPTKK 75




17|SequenceR|90|81|KLIEEMTPPT

>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)

Query: 4 EEMTPP 9
E+MTPP
Sbjct: 360 EDMTPP 365


>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)

Query: 4 EEMTPP 9
E+MTPP
Sbjct: 360 EDMTPP 365


>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)

Query: 4 EEMTPP 9
E+MTPP
Sbjct: 359 EDMTPP 364


>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)

Query: 4 EEMTPP 9
E+MTPP
Sbjct: 359 EDMTPP 364


>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 IEEMTPPT 10
+EE+ PP+
Sbjct: 126 VEEIEPPS 133


>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 IEEMTPPT 10
+EE+ PP+
Sbjct: 126 VEEIEPPS 133


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2 LIEEMTPPT 10
L+E PPT
Sbjct: 539 LLESARPPT 547


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2 LIEEMTPP 9
L +MTPP
Sbjct: 2369 LSSDMTPP 2376


>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)

Query: 4 EEMTPP 9
+E+TPP
Sbjct: 187 QEVTPP 192


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 LIEEMTPPT 10
L+E + PP+
Sbjct: 539 LLESLRPPS 547


>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)

Query: 4 EEMTPP 9
+E+TPP
Sbjct: 188 QEVTPP 193




18|SequenceR|95|86|RHKENKLIEE

>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV

Query: 1 RHKENKLIE 9
RHK + L+E
Sbjct: 147 RHKHSDLVE 155


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 1 RHKENKLIEE 10
+H+ N+ +EE
Sbjct: 1093 KHETNRAMEE 1102


>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51

Query: 1 RHKENKLI 8
RH NKL+
Sbjct: 257 RHYYNKLV 264


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 HKENKLIEE 10
H E K+I++
Sbjct: 3037 HNEEKIIQQ 3045




19|SequenceR|100|91|IKIEERHKEN

>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)

Query: 3 IEERHKEN 10
I++RH+EN
Sbjct: 29 IQKRHQEN 36


>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant

Query: 3 IEERHKEN 10
I++RH+EN
Sbjct: 29 IQKRHQEN 36


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 2 KIEERHKE 9
++EERH++
Sbjct: 3082 RMEERHRK 3089


>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 3 IEERHKEN 10
+EERH ++
Sbjct: 600 LEERHSQD 607


>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58

Query: 3 IEERHKEN 10
IEE KEN
Sbjct: 616 IEEEDKEN 623


>sp|C_PI1HC|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1 IKIEERHKEN 10
+K +ERH EN
Sbjct: 9 LKPKERHHEN 18


>sp|C_PI1HB|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1 IKIEERHKEN 10
+K +ERH EN
Sbjct: 9 LKPKERHHEN 18


>sp|C_PI1HD|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1 IKIEERHKEN 10
+K +ERH EN
Sbjct: 9 LKPKERHHEN 18


>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33

Query: 3 IEERHKEN 10
IEE KEN
Sbjct: 616 IEEEDKEN 623




20|SequenceR|105|96|FDQSKIKIEE

>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 2 DQSKIKIEE 10
DQ+K+K +E
Sbjct: 1122 DQTKMKTQE 1130


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 1 FDQSKI 6
FD+SKI
Sbjct: 373 FDESKI 378


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 2 DQSKIKIEE 10
DQSK+K ++
Sbjct: 1114 DQSKMKTQD 1122


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 2 DQSKIKIEE 10
DQ+K+K +E
Sbjct: 1113 DQTKMKTQE 1121


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 QSKIKIEE 10
Q +IKIEE
Sbjct: 785 QHRIKIEE 792




21|SequenceR|110|101|KEKEYFDQSK

>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate

Query: 3 KEYFDQ 8
KEYFD+
Sbjct: 408 KEYFDR 413


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 KEKEYFDQSK 10
KEK Y++ +K
Sbjct: 4489 KEKTYYELTK 4498


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 KEKEYFDQSK 10
KEK Y++ +K
Sbjct: 4509 KEKTYYELTK 4518


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 KEKEYFDQSK 10
KEK Y++ +K
Sbjct: 4539 KEKTYYELTK 4548


>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)

Query: 1 KEKEYF 6
KEKE+F
Sbjct: 179 KEKEWF 184




22|SequenceR|115|106|EKSLLKEKEY

***** No hits found ******


23|SequenceR|120|111|LEESTEKSLL

>sp|VE6_HPV44|PROTEIN E6|Human papillomavirus 44

Query: 1 LEESTEKSLL 10
+EE T KS+L
Sbjct: 89 VEEETNKSIL 98


>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain

Query: 3 ESTEKSLL 10
E+T KSLL
Sbjct: 72 ETTSKSLL 79


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 1 LEESTEKSL 9
+EES E+S+
Sbjct: 574 VEESIERSI 582


>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49

Query: 2 EESTEKSLL 10
EES E SLL
Sbjct: 374 EESIELSLL 382




24|SequenceR|125|116|VPPPLLEEST

>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 1 VPPPLLEEST 10
+PPPLL ST
Sbjct: 1218 LPPPLLGNST 1227


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 PPPLLEES 9
P P++EES
Sbjct: 23 PDPMMEES 30


>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)

Query: 1 VPPPLLEE 8
VPPPLL +
Sbjct: 286 VPPPLLAQ 293


>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)

Query: 2 PPPLLEES 9
P P++EES
Sbjct: 23 PDPMMEES 30


>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)

Query: 1 VPPPLLEE 8
VPPPLL +
Sbjct: 286 VPPPLLAQ 293


>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 PPPLLEES 9
P P++EES
Sbjct: 23 PDPMMEES 30


>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 VPPPLLEES 9
+PPP LE+S
Sbjct: 114 LPPPNLEDS 122


>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 VPPPLLEES 9
+PPP LE+S
Sbjct: 114 LPPPNLEDS 122


>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 VPPPLLEES 9
+PPP LE+S
Sbjct: 114 LPPPNLEDS 122


>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain

Query: 2 PPPLLEE 8
PP LLEE
Sbjct: 336 PPILLEE 342


>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 2 PPPLLEES 9
P P++EES
Sbjct: 35 PDPVVEES 42


>sp|VME1_MERS1|MEMBRANE protein|Middle East respiratory syndrome-related coronavirus

Query: 4 PLLEEST 10
PL+E+ST
Sbjct: 131 PLVEDST 137


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 PPPLLEES 9
P P +EES
Sbjct: 2642 PSPTVEES 2649


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 PPPLLEES 9
P P +EES
Sbjct: 2642 PSPTVEES 2649


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 PPPLLEES 9
P P +EES
Sbjct: 2642 PSPTVEES 2649


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 PPPLLEES 9
P P +EES
Sbjct: 2642 PSPTVEES 2649


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 PPPLLEES 9
P P +EES
Sbjct: 2642 PSPTVEES 2649


>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)

Query: 1 VPPPLLEEST 10
+PPP L+E+
Sbjct: 267 LPPPGLQEAA 276


>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 2 PPPLLEES 9
PPP EES
Sbjct: 272 PPPKNEES 279




25|SequenceR|130|121|KIQTQVPPPL

>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)

Query: 1 KIQTQVPPP 9
+++TQ PPP
Sbjct: 468 QLRTQAPPP 476


>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)

Query: 1 KIQTQVPPP 9
+++TQ PPP
Sbjct: 468 QLRTQAPPP 476


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 5 QVPPPL 10
Q PPPL
Sbjct: 1616 QAPPPL 1621


Query: 5 QVPPP 9
Q+PPP
Sbjct: 1723 QIPPP 1727


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 5 QVPPPL 10
Q PPPL
Sbjct: 1616 QAPPPL 1621


Query: 5 QVPPP 9
Q+PPP
Sbjct: 1723 QIPPP 1727


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 5 QVPPPL 10
Q PPPL
Sbjct: 1616 QAPPPL 1621


Query: 5 QVPPP 9
Q+PPP
Sbjct: 1723 QIPPP 1727


>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)

Query: 4 TQVPPPL 10
+++PPPL
Sbjct: 229 SKIPPPL 235


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 5 QVPPPL 10
Q PPPL
Sbjct: 1616 QAPPPL 1621


Query: 5 QVPPP 9
Q+PPP
Sbjct: 1723 QIPPP 1727


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 5 QVPPPL 10
Q PPPL
Sbjct: 1616 QAPPPL 1621


Query: 5 QVPPP 9
Q+PPP
Sbjct: 1723 QIPPP 1727


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 5 QVPPPL 10
Q PPPL
Sbjct: 1616 QAPPPL 1621


Query: 5 QVPPP 9
Q+PPP
Sbjct: 1723 QIPPP 1727


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 5 QVPPPL 10
Q PPPL
Sbjct: 1616 QAPPPL 1621


Query: 5 QVPPP 9
Q+PPP
Sbjct: 1723 QIPPP 1727


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 5 QVPPPL 10
Q PPPL
Sbjct: 1616 QAPPPL 1621


Query: 5 QVPPP 9
Q+PPP
Sbjct: 1723 QIPPP 1727


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 5 QVPPPL 10
Q PPPL
Sbjct: 1616 QAPPPL 1621


Query: 5 QVPPP 9
Q+PPP
Sbjct: 1723 QIPPP 1727


>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain

Query: 4 TQVPPPL 10
TQVP PL
Sbjct: 91 TQVPEPL 97


>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54

Query: 2 IQTQVPP 8
+QT+ PP
Sbjct: 538 VQTKCPP 544


>sp|I_MUMPJ|I virus genotype A (strain

Query: 4 TQVPPPL 10
TQ+P PL
Sbjct: 91 TQIPEPL 97


>sp|PHOSP_MUMPJ|PHOSPHOPROTEIN virus genotype A (strain

Query: 4 TQVPPPL 10
TQ+P PL
Sbjct: 91 TQIPEPL 97


>sp|I_MUMPZ|I virus genotype N (strain

Query: 4 TQVPPPL 10
TQ+P PL
Sbjct: 91 TQIPEPL 97


>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)

Query: 4 TQVPPPL 10
TQ+P PL
Sbjct: 91 TQIPEPL 97


>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain

Query: 4 TQVPPPL 10
TQ+P PL
Sbjct: 91 TQIPEPL 97


>sp|PHOSP_MUMP1|PHOSPHOPROTEIN virus (strain SBL-1) (MuV)

Query: 4 TQVPPPL 10
TQ+P PL
Sbjct: 91 TQIPEPL 97


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 2 IQTQVPPPL 10
+QT PP L
Sbjct: 581 LQTNTPPDL 589




26|SequenceR|135|126|ASAHGKIQTQ

>sp|E3GL_ADE05|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 5

Query: 1 ASAHGKIQ 8
ASAHG Q
Sbjct: 13 ASAHGTTQ 20


>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1 ASAHGKIQ 8
ASA GK+Q
Sbjct: 942 ASALGKLQ 949


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 ASAHGKI 7
AS HG+I
Sbjct: 816 ASVHGQI 822


>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12

Query: 2 SAHGKI 7
+AHGK+
Sbjct: 6 AAHGKV 11




27|SequenceR|140|131|KGFYPASAHG

>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 YPASAHG 10
YPA+ HG
Sbjct: 380 YPAALHG 386


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 2 GFYPASAH 9
GF PA H
Sbjct: 11 GFLPAETH 18


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 4 YPASAH 9
YPAS H
Sbjct: 2162 YPASLH 2167


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 4 YPASAH 9
YPAS H
Sbjct: 2162 YPASLH 2167


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 4 YPASAH 9
YPAS H
Sbjct: 2162 YPASLH 2167


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 4 YPASAH 9
YPAS H
Sbjct: 2162 YPASLH 2167


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 4 YPASAH 9
YPAS H
Sbjct: 2162 YPASLH 2167


>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)

Query: 4 YPASAHG 10
YPA HG
Sbjct: 380 YPAVLHG 386


>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United

Query: 1 KGFYP 5
KG+YP
Sbjct: 936 KGYYP 940


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 4 YPASAHG 10
+P S HG
Sbjct: 614 FPTSTHG 620


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 2 GFYPASA 8
G+YP S
Sbjct: 66 GYYPTSG 72


>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15

Query: 2 GFYPASAHG 10
GFY HG
Sbjct: 474 GFYIQDVHG 482


>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)

Query: 3 FYPASAH 9
F+P S H
Sbjct: 23 FFPISCH 29


>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 FYPASAHG 10
+PAS HG
Sbjct: 166 LHPASLHG 173


>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3

Query: 4 YPASAH 9
YPA AH
Sbjct: 616 YPARAH 621


>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3

Query: 4 YPASAH 9
YPA AH
Sbjct: 616 YPARAH 621


>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 FYPASAHG 10
+PA AHG
Sbjct: 172 LHPACAHG 179


>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 4 YPASAH 9
YPA AH
Sbjct: 616 YPARAH 621


>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 4 YPASAH 9
YPA AH
Sbjct: 616 YPARAH 621


>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 4 YPASAH 9
YPA AH
Sbjct: 616 YPACAH 621


>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 4 YPASAH 9
YPA AH
Sbjct: 616 YPARAH 621


>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 4 YPASAH 9
YPA AH
Sbjct: 616 YPARAH 621


>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)

Query: 2 GFYPASAHG 10
GF P HG
Sbjct: 430 GFGPLITHG 438


>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)

Query: 2 GFYPASAHG 10
GF P HG
Sbjct: 430 GFGPLITHG 438


>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)

Query: 2 GFYPASAHG 10
GF P HG
Sbjct: 430 GFGPLITHG 438


>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 2 GFYPASAHG 10
GF P HG
Sbjct: 430 GFGPLITHG 438


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 1 KGFYPASAHG 10
+ FY + HG
Sbjct: 1068 ESFYNSETHG 1077


>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2 GFYPASAHG 10
GF P HG
Sbjct: 430 GFGPLITHG 438


>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)

Query: 3 FYPASAHG 10
FY ASA G
Sbjct: 556 FYRASATG 563


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2 GFYPASAHG 10
G Y ++AHG
Sbjct: 1263 GSYMSTAHG 1271


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 2 GFYPASAHG 10
G Y ++AHG
Sbjct: 1267 GSYMSTAHG 1275


>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4

Query: 4 YPASAH 9
YPA AH
Sbjct: 614 YPARAH 619




28|SequenceR|145|136|VSPEEKGFYP

>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P

Query: 2 SPEEKGFYP 10
+PE + FYP
Sbjct: 165 TPEYRVFYP 173


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 1 VSPEEKGF 8
+SP++KGF
Sbjct: 876 MSPKDKGF 883


>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 1 VSPEEKGF 8
+SP +KGF
Sbjct: 876 MSPRDKGF 883


>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee

Query: 1 VSPEEKGF 8
+SP +KGF
Sbjct: 876 MSPRDKGF 883


>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo

Query: 1 VSPEEKGF 8
+SP +KGF
Sbjct: 875 MSPRDKGF 882


>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 300 VKPHEKGINP 309


>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 319 VKPHEKGINP 328


>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 316 VKPHEKGINP 325


>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 VSPEEKGF 8
++PEE+G+
Sbjct: 489 LTPEERGY 496


>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort

Query: 1 VSPEEKGFYP 10
V P EKG P
Sbjct: 323 VKPHEKGINP 332


>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 VSPEEKGFYP 10
+SPE F+P
Sbjct: 323 LSPERMFFHP 332


>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 VSPEEKGFYP 10
+SPE F+P
Sbjct: 323 LSPERMFFHP 332


>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1 VSPEEKGFYP 10
+ P EKG P
Sbjct: 323 IKPHEKGINP 332


>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 VSPEEKGFYP 10
+ P EKG P
Sbjct: 323 IKPHEKGINP 332


>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)

Query: 3 PEEKGFY 9
PE+KG Y
Sbjct: 47 PEDKGNY 53


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 1 VSPEEKGFYP 10
V +E G+YP
Sbjct: 939 VEVQESGYYP 948


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 4 EEKGFYP 10
+E G+YP
Sbjct: 926 QESGYYP 932


>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 VSPEEKGFYP 10
+ P EKG P
Sbjct: 323 IKPHEKGINP 332


>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea

Query: 1 VSPEEKGFYP 10
+ P EKG P
Sbjct: 323 IKPHEKGINP 332


>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus

Query: 2 SPEEKGF 8
SPE K F
Sbjct: 657 SPENKAF 663


>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate

Query: 2 SPEEKGF 8
SPE K F
Sbjct: 657 SPENKAF 663


>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)

Query: 2 SPEEKGF 8
SPE K F
Sbjct: 656 SPENKAF 662


>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)

Query: 2 SPEEKGF 8
SPE K F
Sbjct: 656 SPENKAF 662


>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New

Query: 1 VSPEEKGFYP 10
+ P EKG P
Sbjct: 323 IKPHEKGINP 332


>sp|VE7_HPV60|PROTEIN E7|Human papillomavirus type 60

Query: 3 PEEKGFYP 10
PEE+ YP
Sbjct: 36 PEEEEHYP 43


>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 PEEKGFYP 10
P +KG YP
Sbjct: 477 PIDKGLYP 484


>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 2 SPEEKGFY 9
SP E G+Y
Sbjct: 43 SPPEMGWY 50


>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 PEEKGFYP 10
P+EK YP
Sbjct: 478 PKEKELYP 485


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 2 SPEEKGFYP 10
SP+ K YP
Sbjct: 268 SPDRKAAYP 276


>sp|PHOSP_HRSV1|PHOSPHOPROTEIN respiratory syncytial virus B

Query: 2 SPEEKGFYP 10
+PE K YP
Sbjct: 72 TPEAKANYP 80


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 2 SPEEKGFYP 10
SP+ K YP
Sbjct: 268 SPDRKATYP 276


>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 1 VSPEEKGFYP 10
V P +KG P
Sbjct: 323 VKPHDKGINP 332


>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 1 VSPEEKGFYP 10
V P +KG P
Sbjct: 323 VKPHDKGINP 332


>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957

Query: 1 VSPEEKGFYP 10
V P +KG P
Sbjct: 323 VKPHDKGINP 332


>sp|PHOSP_HRSVB|PHOSPHOPROTEIN respiratory syncytial virus B

Query: 2 SPEEKGFYP 10
+PE K YP
Sbjct: 72 TPETKANYP 80


>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3 PEEKGFYP 10
P EKG P
Sbjct: 318 PHEKGINP 325


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 VSPEEKGF 8
V+P+EK F
Sbjct: 51 VTPDEKYF 58




29|SequenceR|150|141|TSSPAVSPEE

>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 TSSPAVSPEE 10
T+ PA PEE
Sbjct: 354 TTGPATLPEE 363


>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)

Query: 1 TSSPAVSPEE 10
T PA PEE
Sbjct: 356 TMGPATLPEE 365


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1 TSSPAVSPEE 10
T PA PEE
Sbjct: 356 TMGPATLPEE 365


>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)

Query: 2 SSPAVSPEE 10
S P +SPEE
Sbjct: 228 SDPPISPEE 236


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 4 PAVSPEE 10
PAV P+E
Sbjct: 2979 PAVGPDE 2985


>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 SSPAVSP 8
+SPAVSP
Sbjct: 396 TSPAVSP 402


>sp|UL17_HCMVM|PROTEIN UL17|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 SSPAVSPEE 10
S PA SPEE
Sbjct: 94 SDPARSPEE 102


>sp|UL17_HCMVA|UNCHARACTERIZED protein UL17|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 SSPAVSPEE 10
S PA SPEE
Sbjct: 94 SDPARSPEE 102


>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 SSPAVSP 8
+SPAVSP
Sbjct: 396 TSPAVSP 402


>sp|UL17_HCMVT|PROTEIN UL17|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2 SSPAVSPEE 10
S PA SPEE
Sbjct: 94 SDPARSPEE 102


>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 SSPAVSP 8
+SPAVSP
Sbjct: 396 TSPAVSP 402


>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41

Query: 3 SPAVSPE 9
+PA+SPE
Sbjct: 44 APALSPE 50




30|SequenceR|155|146|QFTKGTSSPA

>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 2 FTKGTS 7
F+KGTS
Sbjct: 1605 FSKGTS 1610




31|SequenceR|160|151|MWSGPQFTKG

>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 2 WSGPQFTKG 10
+ GPQ TKG
Sbjct: 906 YKGPQKTKG 914


>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 175 WNNPQKTKG 183


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 2 WSGPQFTKG 10
+ GPQ TKG
Sbjct: 921 YKGPQKTKG 929


>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)

Query: 2 WSGPQFTKG 10
+ GPQ TKG
Sbjct: 906 YKGPQKTKG 914


>sp|VIF_HV1SC|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 91 WNKPQKTKG 99


>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)

Query: 2 WSGPQFTKG 10
+ GPQ TKG
Sbjct: 907 YKGPQKTKG 915


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2 WSGPQF 7
W GPQF
Sbjct: 2774 WKGPQF 2779


>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1 MWSGPQ 6
MW GPQ
Sbjct: 887 MWRGPQ 892


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 1 MWSGPQ 6
MW GPQ
Sbjct: 891 MWRGPQ 896


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 1 MWSGPQ 6
MW GPQ
Sbjct: 891 MWRGPQ 896


>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQQTKG 182


>sp|VIF_HV1Z6|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV1Z2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV1JR|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ T+G
Sbjct: 175 WNNPQKTRG 183


>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ TKG
Sbjct: 174 WNKPQKTKG 182


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2 WSGPQF 7
W GPQ+
Sbjct: 2777 WKGPQY 2782


>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ T+G
Sbjct: 174 WNKPQKTRG 182


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2 WSGPQF 7
W GPQ+
Sbjct: 2777 WKGPQY 2782


>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ T+G
Sbjct: 174 WNKPQKTRG 182


>sp|VIF_HV1V9|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ T+G
Sbjct: 174 WNKPQKTRG 182


>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ T+G
Sbjct: 174 WNKPQKTRG 182


>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ T+G
Sbjct: 174 WNKPQKTRG 182


>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ T+G
Sbjct: 174 WNKPQKTRG 182


>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ T+G
Sbjct: 174 WNKPQKTRG 182


>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ T+G
Sbjct: 174 WNKPQKTRG 182


>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ T+G
Sbjct: 174 WNKPQQTRG 182


>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 WSGPQFTKG 10
W+ PQ T+G
Sbjct: 174 WNKPQETRG 182


>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 MWSGPQF 7
+W+GP +
Sbjct: 153 LWTGPNY 159


>sp|SPIKE_ADE03|FIBER protein|Human adenovirus B serotype 3

Query: 1 MWSGPQ 6
+W+GP+
Sbjct: 133 LWTGPK 138


>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 MWSGPQF 7
+W+GP +
Sbjct: 153 LWTGPNY 159


>sp|US21_HCMVM|MEMBRANE protein US21|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 WSGPQFTK 9
W+ P F K
Sbjct: 70 WAEPNFPK 77


>sp|US21_HCMVA|UNCHARACTERIZED protein HWLF2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 WSGPQFTK 9
W+ P F K
Sbjct: 70 WAEPNFPK 77


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2 WSGPQFTK 9
W GP++ K
Sbjct: 2771 WIGPRYEK 2778


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1 MWSGPQF 7
+W GP++
Sbjct: 2777 IWKGPKY 2783


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2 WSGPQ 6
W GPQ
Sbjct: 1407 WKGPQ 1411


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2 WSGPQ 6
W GPQ
Sbjct: 1407 WKGPQ 1411


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 1 MWSGPQ 6
+WS PQ
Sbjct: 838 LWSKPQ 843


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2 WSGPQ 6
W GPQ
Sbjct: 1407 WKGPQ 1411


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1 MWSGPQFTK 9
+W GP++ +
Sbjct: 2775 VWRGPKYEE 2783


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1 MWSGPQF 7
+W GP++
Sbjct: 2775 VWRGPKY 2781


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1 MWSGPQF 7
+W GP++
Sbjct: 2775 VWRGPKY 2781


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 2 WSGP 5
WSGP
Sbjct: 1385 WSGP 1388


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1 MWSGPQF 7
+W GP++
Sbjct: 2775 VWRGPKY 2781




32|SequenceR|169|156|QNHSKGDRPMWSGP

>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 9 PMWSGP 14
PMW GP
Sbjct: 886 PMWRGP 891


Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2036 RGDLPVW 2042


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 9 PMWSGP 14
PMW GP
Sbjct: 890 PMWRGP 895


Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2040 RGDLPVW 2046


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 9 PMWSGP 14
PMW GP
Sbjct: 890 PMWRGP 895


Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2040 RGDLPVW 2046


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 7 DRPMWSGP 14
DR +W GP
Sbjct: 2772 DRTVWRGP 2779


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 7 DRPMWSGP 14
DR +W GP
Sbjct: 2772 DRTVWRGP 2779


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 7 DRPMWSGP 14
DR +W GP
Sbjct: 2772 DRTVWRGP 2779


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 7 DRPMWSGP 14
DR +W GP
Sbjct: 2772 DRTVWRGP 2779


>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 6 GDRPMWS 12
G RP+W+
Sbjct: 336 GSRPLWT 342


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 QNHSKGDR 8
Q HS GDR
Sbjct: 1267 QKHSYGDR 1274


>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 KGDRPMWSGP 14
KG RP++S P
Sbjct: 699 KGYRPVFSSP 708


>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)

Query: 2 NHSKGDRPMWSGP 14
+HS+ R W GP
Sbjct: 82 DHSQFSRYRWGGP 94


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 5 KGDRPMWSG 13
+GDR +W G
Sbjct: 170 QGDRVLWVG 178


>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 KGDRPMWSGP 14
KG RP++S P
Sbjct: 699 KGYRPVFSSP 708


>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 KGDRPMWSGP 14
KG RP++S P
Sbjct: 708 KGYRPVFSSP 717


>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 KGDRPMWSGP 14
KG RP++S P
Sbjct: 697 KGYRPVFSSP 706


>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 KGDRPMWSGP 14
KG RP++S P
Sbjct: 705 KGYRPVFSSP 714


>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 KGDRPMWSGP 14
KG RP++S P
Sbjct: 697 KGYRPVFSSP 706


>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 KGDRPMWSGP 14
KG RP++S P
Sbjct: 707 KGYRPVFSSP 716


>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)

Query: 3 HSKGDRPMWSGP 14
HS+ R W GP
Sbjct: 83 HSQFSRYRWRGP 94


>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 KGDRPMWSGP 14
KG RP++S P
Sbjct: 703 KGYRPVFSSP 712


>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 KGDRPMWSGP 14
KG RP++S P
Sbjct: 704 KGYRPVFSSP 713


>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 KGDRPMWSGP 14
KG RP++S P
Sbjct: 695 KGYRPVFSSP 704


>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 KGDRPMWSGP 14
KG RP++S P
Sbjct: 696 KGYRPVFSSP 705


>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 KGDRPMWSGP 14
KG RP++S P
Sbjct: 696 KGYRPVFSSP 705


>sp|POL_HV1Z6|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 93 PIWKGP 98


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 7 DRPMWSGP 14
D+ +W GP
Sbjct: 2774 DKKIWKGP 2781


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1380 PLWKGP 1385


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1386 PLWKGP 1391


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1380 PLWKGP 1385


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1392 PLWKGP 1397


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1380 PLWKGP 1385


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1379 PLWKGP 1384


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1380 PLWKGP 1385


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1392 PLWKGP 1397


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1392 PLWKGP 1397


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1382 PLWKGP 1387


>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)

Query: 6 GDRPMW 11
GDRP W
Sbjct: 371 GDRPDW 376


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPTW-GP 109


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPTW-GP 109


Query: 5 KGDRPMWSG 13
KG R +W+G
Sbjct: 2017 KGYRGVWAG 2025


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPTW-GP 109


>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)

Query: 6 GDRPMW 11
GDRP W
Sbjct: 368 GDRPDW 373


>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)

Query: 1 QNHSKGDRPMWSGP 14
QN DRP + P
Sbjct: 34 QNRFNNDRPQPNQP 47


>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1380 PIWKGP 1385


>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12

Query: 2 NHSKGDRPMWSGP 14
N S+G + WS P
Sbjct: 98 NTSQGLKLSWSAP 110


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1377 PIWKGP 1382


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1384 PIWKGP 1389


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1375 PIWKGP 1380


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 9 PMWSGP 14
P WSGP
Sbjct: 1383 PRWSGP 1388


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1381 PIWKGP 1386


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1377 PIWKGP 1382


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1377 PIWKGP 1382


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1385 PIWKGP 1390


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1375 PIWKGP 1380


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1390 PIWKGP 1395


>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1381 PIWKGP 1386


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1384 PIWKGP 1389


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1380 PIWKGP 1385


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1376 PIWKGP 1381


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1379 PIWKGP 1384


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1390 PIWKGP 1395


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPHW-GP 109


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1375 PVWKGP 1380


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1379 PVWKGP 1384


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1380 PIWKGP 1385


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1378 PVWKGP 1383


>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1381 PIWKGP 1386


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2013 RGDLPVW 2019


>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 1604 RGDLPVW 1610


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1380 PVWKGP 1385


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2013 RGDLPVW 2019


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1375 PVWKGP 1380


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1375 PVWKGP 1380


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2013 RGDLPVW 2019


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2014 RGDLPVW 2020


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2013 RGDLPVW 2019


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2013 RGDLPVW 2019


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2014 RGDLPVW 2020


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPHW-GP 109


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2014 RGDLPVW 2020


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2014 RGDLPVW 2020


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2014 RGDLPVW 2020


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2014 RGDLPVW 2020


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2014 RGDLPVW 2020


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2015 RGDLPVW 2021


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2014 RGDLPVW 2020


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2015 RGDLPVW 2021


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 1 QNHSKGDRPMWSGP 14
++ +K P W GP
Sbjct: 1665 RHQTKNLEPRWKGP 1678


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 1 QNHSKGDRPMWSGP 14
++ +K P W GP
Sbjct: 1665 RHQTKNLEPRWKGP 1678


>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 7 DRPMWSG 13
DRP W+
Sbjct: 754 DRPKWTA 760


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 1 QNHSKGDRPMWSGP 14
++ +K P W GP
Sbjct: 1665 RHQTKNLEPRWKGP 1678


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPHW-GP 109


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2013 RGDLPVW 2019


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2013 RGDLPVW 2019


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2013 RGDLPVW 2019


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2013 RGDLPVW 2019


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 9 PMWSGP 14
P+W GP
Sbjct: 1373 PIWKGP 1378


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5 KGDRPMW 11
+GD P+W
Sbjct: 2013 RGDLPVW 2019


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPNW-GP 109


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 5 KGDRPMWS 12
+G RP W+
Sbjct: 101 RGSRPNWA 108


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPSW-GP 109


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPNW-GP 109


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPNW-GP 109


>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPTW-GP 109


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 5 KGDRPMWSGP 14
+G RP W GP
Sbjct: 101 RGSRPNW-GP 109


>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)

Query: 7 DRPMWSGP 14
+RP W+ P
Sbjct: 432 NRPAWTRP 439


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 5 KGDRPMW 11
+G RP W
Sbjct: 101 RGSRPSW 107


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 5 KGDRPMW 11
+GD P W
Sbjct: 909 EGDTPAW 915




THE END