NDUC2_HUMAN Blast Output
Archaea
1|Sequence|1|10|MIARRNPEPL

>sp|AROK_METTP|SHIKIMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 RRNPEPL 10
RR+PEP+
Sbjct: 217 RRSPEPI 223


>sp|ALF1_THEKO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 MIARRNPEPL 10
+ R NPEP+
Sbjct: 248 IFQRENPEPM 257


>sp|CBIMQ_METLZ|PUTATIVE fused cobalt transport protein|Methanocorpusculum labreanum

Query: 2 IARRNPEPL 10
+ +RNPE L
Sbjct: 34 LVKRNPESL 42


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 ARRNPEPL 10
A+RNPE L
Sbjct: 460 AKRNPEQL 467


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 ARRNPEPL 10
A+RNPE L
Sbjct: 460 AKRNPEQL 467


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 ARRNPEPL 10
A+RNPE L
Sbjct: 460 AKRNPEQL 467


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 ARRNPEPL 10
A+RNPE L
Sbjct: 460 AKRNPEQL 467


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 ARRNPEPL 10
A+RNPE L
Sbjct: 460 AKRNPEQL 467


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 ARRNPEPL 10
A+RNPE L
Sbjct: 460 AKRNPEQL 467


>sp|TRMI_METJA|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 2 IARRNPEPL 10
+AR PEPL
Sbjct: 267 VARVPPEPL 275


>sp|ALF1_PYRFU|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MIARRNPEPL 10
+ R NPEP+
Sbjct: 248 IFQRENPEPM 257


>sp|Y1546_ARCFU|UNCHARACTERIZED MscS family protein AF_1546|Archaeoglobus fulgidus (strain ATCC

Query: 3 ARRNPEPL 10
A +NPEP+
Sbjct: 204 ALKNPEPV 211


>sp|OGT_PYRSN|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus sp. (strain NA2)

Query: 4 RRNPEPL 10
RRNP P+
Sbjct: 133 RRNPYPI 139


>sp|ALF1_PYRAB|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus abyssi (strain GE5 /

Query: 1 MIARRNPEPL 10
+ R NPEP+
Sbjct: 248 IFQRENPEPM 257


>sp|OGT_METJA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MIARRNPEPL 10
M +RNP PL
Sbjct: 115 MALKRNPLPL 124


>sp|DNLI_METMJ|DNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 MIARRNPEPL 10
++ARR+P+ L
Sbjct: 201 LLARRDPDAL 210


>sp|Y1385_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 2 IARRNPEP 9
+A+RN EP
Sbjct: 21 LAKRNKEP 28


>sp|METK_PYRFU|S-ADENOSYLMETHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ARRNPEPL 10
AR NP PL
Sbjct: 149 ARENPIPL 156


>sp|DLHH_SACS2|PUTATIVE carboxymethylenebutenolidase|Saccharolobus solfataricus (strain

Query: 5 RNPEPL 10
RNP+PL
Sbjct: 172 RNPQPL 177


>sp|SYT_THEGJ|THREONINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 ARRNPEPL 10
A +NPEP+
Sbjct: 19 ALKNPEPI 26




2|Sequence|6|15|NPEPLRFLPD

>sp|HYPA_METST|HYDROGENASE maturation factor HypA|Methanosphaera stadtmanae (strain ATCC

Query: 1 NPEPLRFLPD 10
NPE LRF+ D
Sbjct: 40 NPEQLRFMMD 49


>sp|KPRS_THEKO|RIBOSE-PHOSPHATE pyrophosphokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NPEPLRFLP 9
NPE LRF P
Sbjct: 123 NPETLRFFP 131


>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 1 NPEPLRFL 8
NP PLRF+
Sbjct: 18 NPGPLRFV 25


>sp|PYRB_CENSY|ASPARTATE carbamoyltransferase catalytic subunit|Cenarchaeum symbiosum

Query: 1 NPEPLRFLPD 10
+PEPLR D
Sbjct: 188 SPEPLRIRTD 197


>sp|HYPA_METS3|HYDROGENASE maturation factor HypA|Methanobrevibacter smithii (strain ATCC

Query: 1 NPEPLRFL 8
NPE LRF+
Sbjct: 40 NPEQLRFM 47


>sp|Y2337_ARCFU|UNCHARACTERIZED protein AF_2337|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NPEPLRFLPD 10
N EP F+PD
Sbjct: 54 NEEPEYFIPD 63


>sp|Y121_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 NPEPLR 6
NPEP+R
Sbjct: 17 NPEPVR 22


>sp|SYH_ARCFU|HISTIDINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PEPLRF 7
P+PLRF
Sbjct: 95 PKPLRF 100


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 2 PEPLRFLP 9
PEP F+P
Sbjct: 402 PEPQEFIP 409


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 1 NPEPLRF 7
NPE LRF
Sbjct: 40 NPEQLRF 46


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 3 EPLRFLP 9
EP+R+LP
Sbjct: 361 EPIRYLP 367


>sp|HYPA_METAR|HYDROGENASE maturation factor HypA|Methanocella arvoryzae (strain DSM 22066

Query: 1 NPEPLRFL 8
NPE L+F+
Sbjct: 40 NPEQLQFM 47


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NPEPLRFLP 9
NP+ ++F+P
Sbjct: 175 NPDTVKFIP 183


>sp|EF1A_METVS|ELONGATION factor 1-alpha|Methanococcus vannielii (strain ATCC 35089

Query: 1 NPEPLRFLP 9
NPE + F+P
Sbjct: 179 NPEQINFVP 187


>sp|DNAG_METMA|DNA primase DnaG|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NPEPLRFLP 9
+PE +RF P
Sbjct: 426 SPEAIRFRP 434


>sp|HUTI_PYRAR|IMIDAZOLONEPROPIONASE arsenaticum (strain DSM 13514

Query: 3 EPLRFL 8
EPLRFL
Sbjct: 390 EPLRFL 395


>sp|EF1A_METVA|ELONGATION factor 1-alpha|Methanococcus vannielii

Query: 1 NPEPLRFLP 9
NPE + F+P
Sbjct: 179 NPEQINFVP 187


>sp|KPRS_PYRFU|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NPEPLRFLP 9
NP+ L F P
Sbjct: 122 NPKTLEFFP 130


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 NPEPLRFL 8
+PE LRFL
Sbjct: 297 HPEVLRFL 304


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NPEPLRFL 8
+PE LRFL
Sbjct: 297 HPEVLRFL 304


>sp|NOP10_METBU|RIBOSOME biogenesis protein Nop10|Methanococcoides burtonii (strain DSM

Query: 1 NPEPLRFLP 9
NP P RF P
Sbjct: 29 NPLPARFSP 37


>sp|NOP10_SACS2|RIBOSOME biogenesis protein Nop10|Saccharolobus solfataricus (strain ATCC

Query: 2 PEPLRFLPD 10
P P RF P+
Sbjct: 30 PHPSRFSPE 38




3|Sequence|11|20|RFLPDEARSL

>sp|Y266_ARCFU|UNCHARACTERIZED transporter AF_0266|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FLPDEARSL 10
FLPD RSL
Sbjct: 186 FLPDSIRSL 194


>sp|Y078_METKA|UPF0285 protein MK0078|Methanopyrus kandleri (strain AV19 /

Query: 1 RFLPDEAR 8
R LPDEAR
Sbjct: 44 RSLPDEAR 51


>sp|COFD_HALMA|2-PHOSPHO-L-LACTATE transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RFLPDEARS 9
R+LPD+A++
Sbjct: 92 RYLPDDAQT 100


>sp|COFD_HALSA|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RFLPDEARS 9
R+LPD+A++
Sbjct: 93 RYLPDDAQT 101


>sp|COFD_HALS3|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RFLPDEARS 9
R+LPD+A++
Sbjct: 93 RYLPDDAQT 101


>sp|TRPD_METHJ|ANTHRANILATE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 4 PDEARSL 10
PDEAR L
Sbjct: 17 PDEARDL 23


>sp|DPCKG_METB6|GTP-DEPENDENT dephospho-CoA kinase|Methanoregula boonei (strain DSM 21154

Query: 3 LPDEARSL 10
LPDE+R L
Sbjct: 4 LPDESRQL 11


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RFLPDEARSL 10
++LP+ ARSL
Sbjct: 517 KYLPEIARSL 526


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 1 RFLPDEARSL 10
++LP+ ARSL
Sbjct: 517 KYLPEIARSL 526


>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RFLPDEARSL 10
++LP+ ARSL
Sbjct: 519 KYLPEIARSL 528


>sp|GVPJ_HALMT|GAS vesicle protein J|Haloferax mediterranei (strain ATCC 33500

Query: 4 PDEARSL 10
PDE+RSL
Sbjct: 79 PDESRSL 85


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RFLPDEARSL 10
R LP+ ARS+
Sbjct: 392 RHLPEPARSM 401


>sp|SUCC_METTH|SUCCINATE--COA ligase [ADP-forming] subunit beta|Methanothermobacter

Query: 2 FLPDEARSL 10
FLP EAR +
Sbjct: 146 FLPYEAREI 154


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 RFLPDEARSL 10
+++P+ ARSL
Sbjct: 473 KYIPELARSL 482


>sp|IF1A_AERPE|TRANSLATION initiation factor 1A|Aeropyrum pernix (strain ATCC 700893

Query: 1 RFLPDEARSL 10
R+L DE R L
Sbjct: 84 RYLRDEVRKL 93




4|Sequence|16|25|EARSLPPPKL

>sp|Y384_ARCFU|UPF0252 protein AF_0384|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EARSLPPPKL 10
E SLPPP++
Sbjct: 85 EKASLPPPQI 94


>sp|KHSE_THEGJ|HOMOSERINE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EARSLPPPKL 10
EAR + PPK+
Sbjct: 173 EARRVLPPKI 182


>sp|NOB1_METJA|ENDORIBONUCLEASE Nob1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SLPPPKL 10
SLPPP+
Sbjct: 3 SLPPPEF 9


>sp|GGGPS_IGNH4|GERANYLGERANYLGLYCERYL phosphate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EARSLPPPK 9
EA+++PP K
Sbjct: 141 EAKAIPPEK 149


>sp|RL24_PICTO|LARGE ribosomal subunit protein uL24|Picrophilus torridus (strain ATCC

Query: 3 RSLPPPKL 10
++LPPP++
Sbjct: 102 KNLPPPEV 109


>sp|YGY3_HALL2|UNCHARACTERIZED 50.6 kDa protein in|Haloferax lucentense (strain DSM 14919

Query: 1 EARSLPPPK 9
EAR LP P+
Sbjct: 270 EARGLPEPR 278




5|Sequence|21|30|PPPKLTDPRL

>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 PKLTDPR 9
PKLT PR
Sbjct: 227 PKLTSPR 233


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PKLTDPR 9
P+LTDPR
Sbjct: 269 PELTDPR 275


>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PPKLTDPRL 10
P K+TDP +
Sbjct: 80 PSKITDPNV 88


>sp|TRUA_METAR|TRNA pseudouridine synthase A|Methanocella arvoryzae (strain DSM 22066

Query: 3 PKLTDPRL 10
PKLT PR+
Sbjct: 70 PKLTAPRI 77


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 3 PKLTDP 8
PKLTDP
Sbjct: 278 PKLTDP 283


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 3 PKLTDPR 9
PKL DPR
Sbjct: 273 PKLKDPR 279


>sp|THYX_HALMA|FLAVIN-DEPENDENT thymidylate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PPKLTDP 8
PP TDP
Sbjct: 121 PPSATDP 127


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 3 PKLTDPR 9
PKL DP+
Sbjct: 705 PKLKDPK 711


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 4 KLTDPRL 10
K+TDPR+
Sbjct: 409 KITDPRV 415


>sp|LEUC_SULTO|3-ISOPROPYLMALATE dehydratase large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 KLTDPR 9
K+TDPR
Sbjct: 407 KITDPR 412


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PPKLTDP 8
PPK DP
Sbjct: 263 PPKTRDP 269


>sp|CAS6_PYRHO|CRISPR-ASSOCIATED endoribonuclease Cas6|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 KLTDPRL 10
KLT+PRL
Sbjct: 36 KLTNPRL 42


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 PKLTDPR 9
PKL DP+
Sbjct: 265 PKLKDPK 271


>sp|RS2_NANEQ|SMALL ribosomal subunit protein uS2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PPPKLTDPRL 10
PP LT+P+L
Sbjct: 95 PPGTLTNPQL 104


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PKLTDPR 9
PKL DP+
Sbjct: 652 PKLKDPK 658




6|Sequence|26|35|TDPRLLYIGF

>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DPRLLYIGF 10
DP LLY GF
Sbjct: 202 DPSLLYPGF 210


>sp|PSA_PYRAE|PROTEASOME subunit alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TDPRLLYIGF 10
TDP +YIG+
Sbjct: 152 TDPSGVYIGY 161


>sp|GATD_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma volcanium (strain ATCC

Query: 1 TDPRLLYIG 9
+DPRLL+ G
Sbjct: 94 SDPRLLFGG 102


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TDPRLLYIGF 10
T+P +Y+GF
Sbjct: 519 TNPSPIYLGF 528


>sp|KAD6_SULTO|PUTATIVE adenylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DPRLLY 7
DPR+LY
Sbjct: 93 DPRVLY 98


>sp|CISY_SACS2|CITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PRLLYIG 9
PR LY+G
Sbjct: 359 PRALYVG 365


>sp|ASSY_METTH|ARGININOSUCCINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DPRLLYIGF 10
DP ++ IGF
Sbjct: 214 DPEVIEIGF 222


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PRLLYIGF 10
PRLL +GF
Sbjct: 289 PRLLGLGF 296


>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PRLLYIG 9
PRL Y+G
Sbjct: 358 PRLQYVG 364


>sp|TRPA_AERPE|TRYPTOPHAN synthase alpha chain|Aeropyrum pernix (strain ATCC 700893

Query: 2 DPRLLYIGF 10
DP L+Y+G
Sbjct: 159 DPLLIYLGL 167




7|Sequence|31|40|LYIGFLGYCS

>sp|CYAS_METMA|CYSTEATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LYIGFLGY 8
LYIGF GY
Sbjct: 83 LYIGFSGY 90


>sp|CYAS_METBF|CYSTEATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LYIGFLGY 8
LYIGF GY
Sbjct: 83 LYIGFSGY 90


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LYIGFLGY 8
LYIGF GY
Sbjct: 83 LYIGFSGY 90


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 3 IGFLGYCS 10
+G+L YCS
Sbjct: 215 MGYLAYCS 222


>sp|NTPTH_PYRAR|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 YIGFLGYCS 10
Y+ FLG CS
Sbjct: 81 YVVFLGACS 89


>sp|PGP_PICTO|PHOSPHOGLYCOLATE phosphatase|Picrophilus torridus (strain ATCC 700027

Query: 1 LYIGFLGY 8
+YIGF GY
Sbjct: 66 IYIGFDGY 73


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LYIGFLGY 8
L+IGF GY
Sbjct: 85 LFIGFNGY 92


>sp|AROE_ARCFU|SHIKIMATE dehydrogenase (NADP(+))|Archaeoglobus fulgidus (strain ATCC

Query: 1 LYIGFLGY 8
LY+G +GY
Sbjct: 2 LYLGVIGY 9


>sp|CYAS_METTP|CYSTEATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LYIGFLGY 8
LYI F GY
Sbjct: 83 LYISFSGY 90


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 1 LYIGFLGY 8
LYI F GY
Sbjct: 83 LYISFNGY 90


>sp|Y1566_METJA|UNCHARACTERIZED protein MJ1566|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYIGFLGYC 9
+Y+ +LG C
Sbjct: 96 IYVDYLGRC 104


>sp|TRPG_METJA|ANTHRANILATE synthase component 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YIGFLGY 8
Y+G LGY
Sbjct: 22 YVGTLGY 28


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 2 YIGFLGY 8
Y G++GY
Sbjct: 1034 YYGYMGY 1040


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 YIGFLGY 8
Y G++GY
Sbjct: 1394 YYGYMGY 1400


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 2 YIGFLGYCS 10
Y G LGY S
Sbjct: 388 YAGALGYLS 396


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 2 YIGFLGYCS 10
Y G LGY S
Sbjct: 386 YAGALGYLS 394




8|Sequence|36|45|LGYCSGLIDN

>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 1 LGYCSGL 7
LGYCSG+
Sbjct: 301 LGYCSGI 307


>sp|AGOG_PYRAE|N-GLYCOSYLASE/DNA lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LGYCSGLID 9
L +C+GLID
Sbjct: 178 LTWCAGLID 186


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LGYCSGL 7
+GYCSG+
Sbjct: 298 IGYCSGI 304


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 2 GYCSGL 7
GYCSG+
Sbjct: 314 GYCSGI 319


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 2 GYCSGL 7
GYCSG+
Sbjct: 314 GYCSGI 319


>sp|Y484_METMA|PROTEIN MM_0484|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GYCSGLI 8
GYC GL+
Sbjct: 135 GYCQGLL 141


>sp|Y3591_METAC|PROTEIN MA_3591|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GYCSGLI 8
GYC GL+
Sbjct: 135 GYCQGLL 141


>sp|Y1807_METBF|PROTEIN Mbar_A1807|Methanosarcina barkeri (strain Fusaro /

Query: 2 GYCSGLI 8
GYC GL+
Sbjct: 135 GYCQGLL 141


>sp|PDXT_METMA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina mazei (strain

Query: 1 LGYCSGLI 8
LG C+GLI
Sbjct: 81 LGTCAGLI 88


>sp|PDXT_METBF|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina barkeri (strain

Query: 1 LGYCSGLI 8
LG C+GLI
Sbjct: 81 LGTCAGLI 88


>sp|PDXT_METAC|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina acetivorans

Query: 1 LGYCSGLI 8
LG C+GLI
Sbjct: 81 LGTCAGLI 88


>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LGYCSGLI 8
L YC+GLI
Sbjct: 210 LRYCNGLI 217


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain M.16.4

Query: 1 LGYCSGLI 8
L YC+GLI
Sbjct: 210 LRYCNGLI 217


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LGYCSGLI 8
L YC+GLI
Sbjct: 210 LRYCNGLI 217


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LGYCSGLI 8
L YC+GLI
Sbjct: 210 LRYCNGLI 217


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LGYCSGLI 8
L YC+GLI
Sbjct: 210 LRYCNGLI 217


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LGYCSGLI 8
L YC+GLI
Sbjct: 210 LRYCNGLI 217


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 1 LGYCSGLI 8
L YC+GLI
Sbjct: 210 LRYCNGLI 217


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GYCSGLIDN 10
GY GL+DN
Sbjct: 501 GYYLGLVDN 509


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 1 LGYCSGL 7
+GYC G+
Sbjct: 298 MGYCQGI 304


>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LGYCSGL 7
LG CSGL
Sbjct: 192 LGTCSGL 198


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LGYCSGL 7
LG CSGL
Sbjct: 192 LGTCSGL 198


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LGYCSGL 7
LG CSGL
Sbjct: 192 LGTCSGL 198


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LGYCSGL 7
LG CSGL
Sbjct: 192 LGTCSGL 198


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LGYCSGL 7
LG CSGL
Sbjct: 192 LGTCSGL 198


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LGYCSGL 7
LG CSGL
Sbjct: 192 LGTCSGL 198


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LGYCSGL 7
LG CSGL
Sbjct: 192 LGTCSGL 198


>sp|APE2_AERPE|HOMING endonuclease I-ApeII|Aeropyrum pernix (strain ATCC 700893

Query: 2 GYCSGLID 9
GY +G+ID
Sbjct: 8 GYVAGIID 15


>sp|PDXT_THEON|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermococcus onnurineus

Query: 1 LGYCSGLI 8
+G C+GLI
Sbjct: 82 MGTCAGLI 89


>sp|PDXT_THEKO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermococcus kodakarensis

Query: 1 LGYCSGLI 8
+G C+GLI
Sbjct: 82 MGTCAGLI 89


>sp|PDXT_THEGJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermococcus gammatolerans

Query: 1 LGYCSGLI 8
+G C+GLI
Sbjct: 82 MGTCAGLI 89


>sp|PDXT_PYRHO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrococcus horikoshii (strain

Query: 1 LGYCSGLI 8
+G C+GLI
Sbjct: 81 MGTCAGLI 88


>sp|PDXT_PYRFU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrococcus furiosus (strain

Query: 1 LGYCSGLI 8
+G C+GLI
Sbjct: 82 MGTCAGLI 89


>sp|PDXT_PYRAB|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrococcus abyssi (strain GE5

Query: 1 LGYCSGLI 8
+G C+GLI
Sbjct: 81 MGTCAGLI 88


>sp|PDXT_METLZ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanocorpusculum labreanum

Query: 1 LGYCSGLI 8
+G C+GLI
Sbjct: 76 MGTCAGLI 83


>sp|PDXT_METBU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcoides burtonii

Query: 1 LGYCSGLI 8
+G C+GLI
Sbjct: 81 MGTCAGLI 88


>sp|PDXT_ARCFU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Archaeoglobus fulgidus (strain

Query: 1 LGYCSGLI 8
+G C+GLI
Sbjct: 81 MGTCAGLI 88


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 LGYCSGLI 8
LG C+G+I
Sbjct: 132 LGICAGII 139


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 LGYCSGLI 8
LG C+G+I
Sbjct: 132 LGICAGII 139


>sp|MSRA_HALWD|PEPTIDE methionine sulfoxide reductase MsrA|Haloquadratum walsbyi (strain

Query: 2 GYCSGLIDN 10
GY G IDN
Sbjct: 31 GYAGGDIDN 39


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 2 GYCSGLI 8
G+C GL+
Sbjct: 103 GFCGGLV 109


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 2 GYCSGLI 8
G+C GL+
Sbjct: 101 GFCGGLV 107


>sp|MTAP_PYRAE|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LGYCSGLI 8
LG C GLI
Sbjct: 214 LGMCYGLI 221


>sp|PHAC_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloferax mediterranei (strain ATCC 33500

Query: 1 LGYCSG 6
LGYC G
Sbjct: 147 LGYCMG 152


>sp|PHAC_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula marismortui (strain ATCC 43049

Query: 1 LGYCSG 6
LGYC G
Sbjct: 159 LGYCMG 164


>sp|PHAC_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula hispanica (strain ATCC 33960

Query: 1 LGYCSG 6
LGYC G
Sbjct: 159 LGYCMG 164


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LGYCSGL 7
+GYC G+
Sbjct: 298 MGYCPGV 304


>sp|PDXT_METST|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosphaera stadtmanae

Query: 1 LGYCSGLI 8
LG C+GL+
Sbjct: 79 LGTCAGLV 86


>sp|PDXT_NITMS|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Nitrosopumilus maritimus

Query: 1 LGYCSGLI 8
LG C+G++
Sbjct: 83 LGICAGMV 90




9|Sequence|41|50|GLIDNLIRRR

>sp|DPCKG_METS3|GTP-DEPENDENT dephospho-CoA kinase|Methanobrevibacter smithii (strain ATCC

Query: 1 GLIDNLIRRR 10
G+IDNLI+R+
Sbjct: 61 GIIDNLIQRK 70


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LIDNLIR 8
LIDN+IR
Sbjct: 44 LIDNIIR 50


>sp|PGK_SACS2|PHOSPHOGLYCERATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LIDNLIRRR 10
+I+NL+R+R
Sbjct: 213 IIENLVRKR 221


>sp|COBD_PYRAB|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus abyssi (strain GE5

Query: 1 GLIDNLIRRR 10
G +DN RRR
Sbjct: 35 GFLDNRWRRR 44


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 LIDNLIR 8
LIDN+IR
Sbjct: 44 LIDNIIR 50


>sp|SYP_THEAC|PROLINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LIDNLIRR 9
LID+++RR
Sbjct: 44 LIDSIVRR 51


>sp|CDC6_DESA1|ORC1-TYPE DNA replication protein|Desulfurococcus amylolyticus (strain DSM

Query: 2 LIDNLIRRR 10
+ID LIR+R
Sbjct: 4 IIDELIRKR 12


>sp|DPCKG_METTH|GTP-DEPENDENT dephospho-CoA kinase|Methanothermobacter thermautotrophicus

Query: 2 LIDNLIRRR 10
+IDN I+RR
Sbjct: 55 IIDNRIQRR 63


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LIDNLIRRR 10
+I+NL++RR
Sbjct: 211 IIENLVKRR 219


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GLIDNLIRR 9
G++D+ +RR
Sbjct: 410 GMVDHAVRR 418




10|Sequence|46|55|LIRRRPIATA

>sp|SFSA_AERPE|SUGAR fermentation stimulation protein homolog|Aeropyrum pernix (strain

Query: 1 LIRRRPIATA 10
++R RP+ATA
Sbjct: 220 VVRIRPVATA 229




11|Sequence|51|60|PIATAGLHRQ

>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PIATAGLH 8
P+A+ GLH
Sbjct: 340 PVASGGLH 347


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 PIATAGLH 8
P+A+ GLH
Sbjct: 344 PVASGGLH 351


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PIATAGLH 8
P+A+ GLH
Sbjct: 345 PVASGGLH 352


>sp|MOAA_THEKO|PROBABLE GTP 3',8-cyclase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PIATAGLHR 9
P+A AGL R
Sbjct: 103 PLAKAGLDR 111


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 ATAGLHRQ 10
A AGLHR+
Sbjct: 181 AIAGLHRE 188


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 1 PIATAG 6
PIATAG
Sbjct: 174 PIATAG 179


>sp|PURE_METJA|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide mutase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PIATAGLHR 9
P+AT G+ R
Sbjct: 103 PVATVGIDR 111


>sp|LEU1_METJA|2-ISOPROPYLMALATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IATAGLHRQ 10
IAT+ LHR+
Sbjct: 115 IATSPLHRK 123


>sp|SYR_METMA|ARGININE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 AGLHRQ 10
AG+HRQ
Sbjct: 48 AGIHRQ 53


>sp|PURE_METSM|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanobrevibacter

Query: 1 PIATAGLHR 9
P+AT G+ R
Sbjct: 109 PVATVGIDR 117


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIATAGLH 8
P+++ GLH
Sbjct: 361 PVSSGGLH 368


>sp|PURE_METTH|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanothermobacter

Query: 1 PIATAGLHR 9
P+AT G+ R
Sbjct: 109 PVATVGVDR 117




12|Sequence|56|65|GLHRQLLYIT

>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 GLHRQLLYIT 10
G+H L+Y+T
Sbjct: 371 GVHPSLMYVT 380


>sp|Y544_METTH|UPF0145 protein MTH_544|Methanothermobacter thermautotrophicus (strain

Query: 3 HRQLLYIT 10
HR ++Y+T
Sbjct: 5 HRDVIYVT 12




13|Sequence|61|70|LLYITAFFFA

>sp|Y2423_ARCFU|UNCHARACTERIZED protein AF_2423|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLYITAFFFA 10
L+Y+ AFFFA
Sbjct: 149 LVYLPAFFFA 158


>sp|AIPS_SACS2|ARCHAETIDYLINOSITOL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLYITAFFF 9
+LYI+AF F
Sbjct: 97 ILYISAFIF 105




14|Sequence|66|75|AFFFAGYYLV

>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AFFFAGYYL 9
AFF AGY L
Sbjct: 510 AFFAAGYRL 518


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AFFFAGY 7
AFF+ GY
Sbjct: 368 AFFYGGY 374


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 AFFFAGY 7
AFF+ GY
Sbjct: 363 AFFYTGY 369


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 FFFAGYYLV 10
FF AGY L+
Sbjct: 508 FFSAGYRLL 516


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 FFFAGYYL 9
FF A Y+L
Sbjct: 220 FFIANYFL 227




15|Sequence|71|80|GYYLVKREDY

>sp|PYRI_PYRCJ|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum calidifontis

Query: 2 YYLVKRE 8
+YLVKRE
Sbjct: 126 FYLVKRE 132


>sp|Y73A_ARCFU|UPF0146 protein AF_0739.1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YYLVKREDY 10
+YL++RE+Y
Sbjct: 121 FYLIRRENY 129


>sp|PYRI_PYRIL|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum islandicum

Query: 2 YYLVKRE 8
+YLV+RE
Sbjct: 126 FYLVRRE 132


>sp|PYRI_PYRAR|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum arsenaticum

Query: 2 YYLVKRE 8
+YLV+RE
Sbjct: 126 FYLVRRE 132


>sp|PYRI_PYRAE|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum aerophilum

Query: 2 YYLVKRE 8
+YLV+RE
Sbjct: 126 FYLVRRE 132


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 4 LVKREDY 10
+VKRED+
Sbjct: 431 IVKREDF 437


>sp|Y1674_SULAC|UNCHARACTERIZED protein Saci_1674|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GYYLVKRED 9
G+YLVK +D
Sbjct: 68 GFYLVKDKD 76


>sp|UPPP_METM7|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C7 /

Query: 1 GYYLVKR 7
G YLVKR
Sbjct: 218 GLYLVKR 224


>sp|FLAB2_NATMM|FLAGELLIN B2|Natrialba magadii (strain ATCC 43099

Query: 1 GYYLVKRED 9
GY+ V+ ED
Sbjct: 165 GYFAVENED 173


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 GYYLVKREDY 10
GYY EDY
Sbjct: 465 GYYTDAVEDY 474


>sp|KAE1B_NATPD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 GYYLVKREDY 10
GYY EDY
Sbjct: 473 GYYTDAVEDY 482


>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 2 YYLVKREDY 10
YY VK+ +Y
Sbjct: 292 YYAVKKSEY 300


>sp|CARA_ARCFU|CARBAMOYL phosphate synthase small chain|Archaeoglobus fulgidus (strain

Query: 1 GYYLVKREDY 10
G Y V RED+
Sbjct: 59 GNYGVNREDF 68


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 1 GYYLVKREDY 10
GY R+DY
Sbjct: 375 GYQFAHRDDY 384




16|Sequence|76|85|KREDYLYAVR

>sp|HMGCS_METMA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KREDYLYAV 9
K EDY YAV
Sbjct: 227 KPEDYDYAV 235


>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KREDYLYAV 9
K EDY YAV
Sbjct: 227 KPEDYDYAV 235


>sp|HMGCS_METAC|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KREDYLYAV 9
K EDY YAV
Sbjct: 227 KPEDYDYAV 235


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KREDYLYAV 9
K EDY YAV
Sbjct: 224 KPEDYDYAV 232


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 2 REDYLYA 8
RE YLYA
Sbjct: 633 REQYLYA 639


>sp|Y2340_ARCFU|UNCHARACTERIZED protein AF_2340|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EDYLYAV 9
EDY+Y V
Sbjct: 287 EDYIYGV 293


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 EDYLYAV 9
EDY YAV
Sbjct: 231 EDYAYAV 237




17|Sequence|81|90|LYAVRDREMF

>sp|COMDE_METAC|SULFOPYRUVATE decarboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LYAVRDREM 9
LYA RDRE+
Sbjct: 229 LYACRDREL 237


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 1 LYAVRDRE 8
++AVRDRE
Sbjct: 291 IFAVRDRE 298


>sp|BTUCA_HALSA|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 1 LYAVRDREM 9
LY +RDRE+
Sbjct: 358 LYLLRDREV 366


>sp|BTUCA_HALS3|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 1 LYAVRDREM 9
LY +RDRE+
Sbjct: 358 LYLLRDREV 366


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 1 LYAVRDREM 9
+YA+RDRE+
Sbjct: 311 MYAMRDREI 319


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 LYAVRDREMF 10
+YA DR++F
Sbjct: 121 IYATEDRDLF 130


>sp|Y1183_METJA|UNCHARACTERIZED protein MJ1183|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YAVRDREMF 10
YA+RD+E +
Sbjct: 53 YAIRDKECY 61


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AVRDREMF 10
A+RDRE F
Sbjct: 273 ALRDREFF 280


>sp|Y2267_ARCFU|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase AF_2267|Archaeoglobus

Query: 4 VRDREMF 10
VRDREM
Sbjct: 51 VRDREML 57


>sp|Y862_METTH|UNCHARACTERIZED protein MTH_862|Methanothermobacter thermautotrophicus (strain

Query: 2 YAVRDRE 8
YAVRD++
Sbjct: 45 YAVRDKD 51




18|Sequence|86|95|DREMFGYMKL

>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DREMFGYMKL 10
+RE+FGY L
Sbjct: 691 EREIFGYRML 700


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 2 REMFGYMK 9
R FGYMK
Sbjct: 184 RRAFGYMK 191


>sp|CH60_METBF|CHAPERONIN GroEL|Methanosarcina barkeri (strain Fusaro /

Query: 2 REMFGY 7
RE+FGY
Sbjct: 472 RELFGY 477


>sp|ENGB_NATPD|PROBABLE GTP-binding protein EngB|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DREMFGYMK 9
D EMFG+++
Sbjct: 122 DVEMFGFLQ 130


>sp|MTTB_METBU|TRIMETHYLAMINE methyltransferase MttB|Methanococcoides burtonii (strain DSM 6242

Query: 1 DREMFG 6
DR+MFG
Sbjct: 439 DRDMFG 444


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 1 DREMFGYM 8
DRE++G++
Sbjct: 339 DREVYGFI 346


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 EMFGYMK 9
EMFGY K
Sbjct: 808 EMFGYNK 814


>sp|ENGB_HALLT|PROBABLE GTP-binding protein EngB|Halorubrum lacusprofundi (strain ATCC

Query: 1 DREMFGYMK 9
D EMFG+++
Sbjct: 121 DVEMFGFLE 129


>sp|LEUC_SULAC|3-ISOPROPYLMALATE dehydratase large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DREMFGYMK 9
D+E F Y+K
Sbjct: 228 DQETFNYIK 236


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 REMFGYMKL 10
RE+FGY +
Sbjct: 262 REIFGYTAI 270


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 DREMFGYM 8
DRE F Y+
Sbjct: 560 DREFFDYL 567




19|Sequence|91|100|GYMKLHPEDF

>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 GYMKLHPED 9
G++++HPED
Sbjct: 592 GFVEIHPED 600


>sp|PELO_STAMF|PROTEIN pelota homolog|Staphylothermus marinus (strain ATCC 43588

Query: 1 GYMKLHPED 9
GY+K+ PED
Sbjct: 11 GYLKILPED 19


>sp|CBID_THEAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YMKLHPEDF 10
Y++LHP F
Sbjct: 217 YLRLHPASF 225


>sp|TRPCD_ARCFU|TRYPTOPHAN biosynthesis protein TrpCD|Archaeoglobus fulgidus (strain ATCC

Query: 3 MKLHPEDF 10
+KL PEDF
Sbjct: 457 LKLEPEDF 464


>sp|TRUD_THEKO|PROBABLE tRNA pseudouridine synthase D|Thermococcus kodakarensis (strain

Query: 1 GYMKLHPEDF 10
G +K++PEDF
Sbjct: 21 GKIKIYPEDF 30


>sp|BRIX_PYRFU|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus furiosus

Query: 2 YMKLHPEDF 10
++K+HPED+
Sbjct: 68 FIKVHPEDW 76


>sp|YC8B_METJA|UNCHARACTERIZED protein MJ1282.2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YMKLHPEDF 10
Y+ LH EDF
Sbjct: 124 YVSLHDEDF 132


>sp|BRIX_PYRHO|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus horikoshii

Query: 2 YMKLHPEDF 10
++K+HPED+
Sbjct: 68 FIKVHPEDW 76


>sp|MOAC_METJA|PROBABLE cyclic pyranopterin monophosphate synthase|Methanocaldococcus

Query: 1 GYMKLHPE 8
GY+KL PE
Sbjct: 29 GYIKLKPE 36


>sp|RL30_NITMS|LARGE ribosomal subunit protein uL30|Nitrosopumilus maritimus (strain

Query: 1 GYMKLHPEDF 10
GY K+ PED
Sbjct: 77 GYKKVTPEDL 86


>sp|THYX_PYRHO|FLAVIN-DEPENDENT thymidylate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YMKLHPED 9
Y+K++PED
Sbjct: 93 YIKINPED 100


>sp|PXPA_PYRFU|5-OXOPROLINASE subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YMKLHPED 9
YMKL PE+
Sbjct: 75 YMKLTPEE 82


>sp|PXPA_PYRAB|5-OXOPROLINASE subunit A|Pyrococcus abyssi (strain GE5 /

Query: 2 YMKLHPED 9
YMKL PE+
Sbjct: 75 YMKLTPEE 82


>sp|ARLY_METAC|ARGININOSUCCINATE lyase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 MKLHPE 8
MK+HPE
Sbjct: 348 MKIHPE 353


>sp|PXPA_PYRHO|5-OXOPROLINASE subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YMKLHPED 9
YMKL PE+
Sbjct: 75 YMKLTPEE 82


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 4 KLHPEDF 10
KLHP+D
Sbjct: 28 KLHPDDL 34


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 KLHPEDF 10
KLHP+D
Sbjct: 28 KLHPDDL 34


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 KLHPEDF 10
KLHP+D
Sbjct: 28 KLHPDDL 34


>sp|PXPA_THEON|5-OXOPROLINASE subunit A|Thermococcus onnurineus (strain NA1)

Query: 2 YMKLHPED 9
YMKL PE+
Sbjct: 75 YMKLTPEE 82


>sp|RADA_METMA|DNA repair and recombination protein|Methanosarcina mazei (strain ATCC

Query: 3 MKLHPEDF 10
M+L+PE+F
Sbjct: 164 MELNPEEF 171


>sp|CDPAS_THEPD|CDP-ARCHAEOL synthase|Thermofilum pendens (strain DSM 2475

Query: 4 KLHPEDF 10
+LHP DF
Sbjct: 68 RLHPMDF 74


>sp|BRIX_PYRAB|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus abyssi

Query: 2 YMKLHPEDF 10
++K+HP+D+
Sbjct: 68 FIKVHPDDW 76


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 4 KLHPEDF 10
K HPED+
Sbjct: 120 KEHPEDY 126


>sp|RPO1C_METAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina acetivorans (strain

Query: 4 KLHPEDF 10
K HPED+
Sbjct: 117 KEHPEDY 123


>sp|MTQ2_METJA|RELEASE factor glutamine methyltransferase Mtq2|Methanocaldococcus

Query: 3 MKLHPE 8
+KLHPE
Sbjct: 10 LKLHPE 15


>sp|Y772_SACI1|PROTEIN YN1551_0772|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YMKLHPEDF 10
Y+K HP+ +
Sbjct: 209 YIKTHPKSY 217


>sp|Y2186_SACI2|PROTEIN LS215_2186|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YMKLHPEDF 10
Y+K HP+ +
Sbjct: 209 YIKTHPKSY 217


>sp|Y2147_SACI7|PROTEIN YG5714_2147|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YMKLHPEDF 10
Y+K HP+ +
Sbjct: 209 YIKTHPKSY 217


>sp|Y2028_SACI6|PROTEIN M164_2028|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YMKLHPEDF 10
Y+K HP+ +
Sbjct: 209 YIKTHPKSY 217


>sp|Y2021_SACI4|PROTEIN M1425_2021|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YMKLHPEDF 10
Y+K HP+ +
Sbjct: 209 YIKTHPKSY 217


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 KLHPEDF 10
KLHP D
Sbjct: 28 KLHPNDL 34


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 4 KLHPEDF 10
KLHP D
Sbjct: 28 KLHPNDL 34


>sp|PUR5_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 MKLHPEDF 10
+K H EDF
Sbjct: 25 LKFHREDF 32


>sp|Y2099_SACI3|PROTEIN M1627_2099|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 YMKLHPEDF 10
Y+K HP+ +
Sbjct: 209 YIKTHPKSY 217


>sp|Y103_SACS2|PROTEIN SSO0103|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YMKLHPEDF 10
Y+K HP+ +
Sbjct: 217 YIKTHPKSY 225


>sp|PUR5_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 MKLHPEDF 10
+K H EDF
Sbjct: 25 LKFHREDF 32


>sp|Y096_PYRAR|PROTEIN Pars_0096|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 YMKLHPEDF 10
Y+K HP+ F
Sbjct: 210 YVKSHPKGF 218


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 4 KLHPEDF 10
K+H EDF
Sbjct: 510 KIHDEDF 516


>sp|Y875_PYRAE|PROTEIN PAE0875|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 YMKLHPEDF 10
Y+K HP F
Sbjct: 209 YVKSHPRGF 217


>sp|AATC_ARCFU|A-TYPE ATP synthase subunit C|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MKLHPEDF 10
+KL+P DF
Sbjct: 188 LKLNPSDF 195


>sp|AATE3_METHJ|A-TYPE ATP synthase subunit E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 MKLHPED 9
+K+HP+D
Sbjct: 124 VKVHPDD 130


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 4 KLHPEDF 10
KLH ED+
Sbjct: 510 KLHDEDY 516


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 4 KLHPEDF 10
KLH ED+
Sbjct: 510 KLHDEDY 516


>sp|SYN_THEGJ|ASPARAGINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 YMKLHPED 9
YMK PED
Sbjct: 329 YMKEDPED 336


>sp|SYN_THEKO|ASPARAGINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YMKLHPED 9
YMK PED
Sbjct: 330 YMKEDPED 337


>sp|DHQS_HALMA|3-DEHYDROQUINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GYMKLHPEDF 10
GY+++ ED+
Sbjct: 112 GYVRIFDEDY 121


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 MKLHPEDF 10
+++HPED
Sbjct: 291 VEIHPEDL 298


>sp|ENGB_HALMA|PROBABLE GTP-binding protein EngB|Haloarcula marismortui (strain ATCC

Query: 1 GYMKLHPED 9
G+MK PED
Sbjct: 65 GFMKGVPED 73


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain ATCC

Query: 2 YMKLHPED 9
Y K+HP++
Sbjct: 205 YDKIHPDE 212


>sp|HYD2B_PYRFU|SULFHYDROGENASE 2 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YMKLHPEDF 10
Y+KLH E F
Sbjct: 3 YVKLHSEYF 11




20|Sequence|96|105|HPEDFPEEDK

>sp|LEUC_HALLT|3-ISOPROPYLMALATE dehydratase large subunit|Halorubrum lacusprofundi (strain ATCC

Query: 2 PEDFPEEDK 10
P+D PEED+
Sbjct: 309 PDDLPEEDR 317


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 2 PEDFPEE 8
PED+PEE
Sbjct: 281 PEDYPEE 287


>sp|HIS82_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PEDFPEED 9
PEDFP+++
Sbjct: 17 PEDFPDKE 24


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 2 PEDFPEEDK 10
PED PEE +
Sbjct: 309 PEDLPEEKQ 317


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PEDFPEEDK 10
PED P DK
Sbjct: 405 PEDIPIGDK 413


>sp|AMPPA_PYRFU|AMP phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PEDFPEEDK 10
PED P DK
Sbjct: 405 PEDIPIGDK 413


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 2 PEDFPEEDK 10
PED P DK
Sbjct: 405 PEDIPIGDK 413


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 PEDFPEEDK 10
PED P DK
Sbjct: 405 PEDIPIGDK 413


>sp|RL18_KORCO|LARGE ribosomal subunit protein uL18|Korarchaeum cryptofilum (strain

Query: 2 PEDFPEEDK 10
PE P+ED+
Sbjct: 134 PEILPDEDR 142


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PEDFPEEDK 10
PE PE D+
Sbjct: 481 PETLPESDR 489


>sp|TBPF_HALSA|TATA-BOX-BINDING protein F|Halobacterium salinarum (strain ATCC 700922

Query: 1 HPEDFP 6
+PEDFP
Sbjct: 38 NPEDFP 43


>sp|ARFB_META3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus aeolicus (strain ATCC

Query: 1 HPEDFPE 7
+P+D+PE
Sbjct: 179 NPKDYPE 185


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HPEDFPEE 8
HP+ FP+E
Sbjct: 342 HPQFFPQE 349


>sp|RL18_METMP|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain

Query: 1 HPEDFPE 7
+PED PE
Sbjct: 175 NPEDLPE 181


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 3 EDFPEEDK 10
E PEEDK
Sbjct: 479 EALPEEDK 486


>sp|RL18_METVA|LARGE ribosomal subunit protein uL18|Methanococcus vannielii

Query: 1 HPEDFPE 7
+PED PE
Sbjct: 177 NPEDLPE 183


>sp|RL18_METM5|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain C5

Query: 1 HPEDFPE 7
+PED PE
Sbjct: 175 NPEDLPE 181


>sp|Y1979_METAC|UPF0758 protein MA_1979|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 DFPEEDK 10
D PEED+
Sbjct: 10 DLPEEDR 16


>sp|FLAE_METJA|PUTATIVE flagella-related protein E|Methanocaldococcus jannaschii (strain

Query: 3 EDFPEED 9
ED P+ED
Sbjct: 24 EDIPDED 30


>sp|TBPB_HALSA|TATA-BOX-BINDING protein B|Halobacterium salinarum (strain ATCC 700922

Query: 1 HPEDFP 6
+PEDFP
Sbjct: 38 NPEDFP 43


>sp|NOP10_SACS2|RIBOSOME biogenesis protein Nop10|Saccharolobus solfataricus (strain ATCC

Query: 1 HPEDFPEEDK 10
HP F EDK
Sbjct: 31 HPSRFSPEDK 40


>sp|Y948_METJA|UNCHARACTERIZED protein MJ0948|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PEDFPEEDK 10
P+D+P+E K
Sbjct: 144 PDDYPKETK 152


>sp|RS3_METHJ|SMALL ribosomal subunit protein uS3|Methanospirillum hungatei JF-1

Query: 2 PEDFPEED 9
P+DF EE+
Sbjct: 230 PDDFMEEE 237


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 2 PEDFPEE 8
PE FPEE
Sbjct: 129 PEFFPEE 135


>sp|RL18_METM7|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain C7

Query: 1 HPEDFPE 7
+PED PE
Sbjct: 175 NPEDLPE 181


>sp|RL18_METM6|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain C6

Query: 1 HPEDFPE 7
+PED PE
Sbjct: 175 NPEDLPE 181


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 DFPEEDK 10
D PEED+
Sbjct: 682 DMPEEDR 688


>sp|RL18_METVS|LARGE ribosomal subunit protein uL18|Methanococcus vannielii (strain ATCC

Query: 1 HPEDFPE 7
+PED PE
Sbjct: 175 NPEDLPE 181


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PEDFPE 7
PED+PE
Sbjct: 167 PEDYPE 172


>sp|NOP10_SACI7|RIBOSOME biogenesis protein Nop10|Saccharolobus islandicus (strain

Query: 1 HPEDFPEEDK 10
HP F EDK
Sbjct: 31 HPSRFSPEDK 40


>sp|NOP10_SACI6|RIBOSOME biogenesis protein Nop10|Saccharolobus islandicus (strain M.16.4

Query: 1 HPEDFPEEDK 10
HP F EDK
Sbjct: 31 HPSRFSPEDK 40


>sp|NOP10_SACI4|RIBOSOME biogenesis protein Nop10|Saccharolobus islandicus (strain M.14.25

Query: 1 HPEDFPEEDK 10
HP F EDK
Sbjct: 31 HPSRFSPEDK 40


>sp|NOP10_SACI3|RIBOSOME biogenesis protein Nop10|Saccharolobus islandicus (strain

Query: 1 HPEDFPEEDK 10
HP F EDK
Sbjct: 31 HPSRFSPEDK 40


>sp|NOP10_SACI2|RIBOSOME biogenesis protein Nop10|Saccharolobus islandicus (strain

Query: 1 HPEDFPEEDK 10
HP F EDK
Sbjct: 31 HPSRFSPEDK 40


>sp|NOP10_SACI1|RIBOSOME biogenesis protein Nop10|Saccharolobus islandicus (strain

Query: 1 HPEDFPEEDK 10
HP F EDK
Sbjct: 31 HPSRFSPEDK 40


>sp|Y638_METJA|UNCHARACTERIZED protein MJ0638|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PEDFPEEDK 10
PEDFP K
Sbjct: 13 PEDFPNYIK 21


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 3 EDFPEEDK 10
E FP+E+K
Sbjct: 1068 ETFPDEEK 1075


>sp|Y453_METAC|UNCHARACTERIZED glycosyltransferase MA_0453|Methanosarcina acetivorans (strain ATCC

Query: 2 PEDFPE 7
PE FPE
Sbjct: 249 PEQFPE 254




21|Sequence|101|110|PEEDKKTYGE

>sp|RNH2_METM6|RIBONUCLEASE HII|Methanococcus maripaludis (strain C6 /

Query: 2 EEDKKTYGE 10
EE KKT+GE
Sbjct: 178 EEYKKTFGE 186


>sp|RNH2_METM5|RIBONUCLEASE HII|Methanococcus maripaludis (strain C5 /

Query: 2 EEDKKTYGE 10
EE KKT+GE
Sbjct: 178 EEYKKTFGE 186


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PEEDKKTYGE 10
PEE+ K Y E
Sbjct: 247 PEEEVKLYAE 256


>sp|CSM3_METJA|CRISPR system Cms endoribonuclease Csm3|Methanocaldococcus jannaschii

Query: 1 PEEDKKTY 8
PEE+KK Y
Sbjct: 115 PEENKKDY 122


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 PEEDKKTY 8
PEE KK+Y
Sbjct: 532 PEEVKKSY 539


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 1 PEEDKKT 7
PEEDKK
Sbjct: 254 PEEDKKN 260




22|Sequence|106|119|KTYGEIFEKFHPIR

>sp|RS5_METTH|SMALL ribosomal subunit protein uS5|Methanothermobacter

Query: 5 EIFEKFHPI 13
EIFE+ HPI
Sbjct: 30 EIFEEGHPI 38


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 5 EIFEKFHPI 13
++ EKFHPI
Sbjct: 196 DLVEKFHPI 204


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 3 YGEIFEKFHPI 13
YGE E HP+
Sbjct: 446 YGEFVENNHPL 456


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 3 YGEIFEKFHPI 13
YGE E HP+
Sbjct: 438 YGEFVENNHPL 448


>sp|FEN_ARCFU|FLAP endonuclease 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KTYGEIFEKFHPIR 14
KTYG+IF ++
Sbjct: 253 KTYGDIFRALKALK 266


>sp|RS5_SULTO|SMALL ribosomal subunit protein uS5|Sulfurisphaera tokodaii (strain DSM

Query: 5 EIFEKFHPI 13
EIFEK +PI
Sbjct: 33 EIFEKNYPI 41


>sp|FOLD_PYRNV|BIFUNCTIONAL protein FolD|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 GEIFEKFHPIR 14
G +FE+ PI+
Sbjct: 113 GRLFERLSPIK 123


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 TYGEIFEKFHPI 13
++GE E HP+
Sbjct: 409 SFGEFMENNHPL 420


>sp|COBD_META3|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus aeolicus

Query: 1 KTYGEIFEKFHP 12
+ +GE+ EK HP
Sbjct: 15 RIFGELPEKIHP 26


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 5 EIFEKFHP 12
E+ EK+HP
Sbjct: 972 ELIEKYHP 979


>sp|AATB_METJA|A-TYPE ATP synthase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 5 EIFEKFHP 12
E+ EK+HP
Sbjct: 453 ELIEKYHP 460


>sp|PDAD2_METAC|PYRUVOYL-DEPENDENT arginine decarboxylase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 KTYGEIFEKFH 11
K G IF+ FH
Sbjct: 146 KASGHIFDTFH 156


>sp|GUAAA_METST|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosphaera

Query: 4 GEIFEKFHPI 13
GEIFE F+ I
Sbjct: 173 GEIFENFNKI 182


>sp|PDAD2_METMA|PYRUVOYL-DEPENDENT arginine decarboxylase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KTYGEIFEKFH 11
K G IF+ FH
Sbjct: 146 KASGHIFDTFH 156


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 3 YGEIFEKFHP 12
YG++ +K++P
Sbjct: 94 YGKLIQKYYP 103


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 TYGEIFEKFHPI 13
YG+ E HP+
Sbjct: 424 NYGDFLENNHPL 435


>sp|Y1508_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 KTYGEIFEKFHPIR 14
K G IF++FH I+
Sbjct: 83 KISGFIFQQFHLIK 96


>sp|RRP42_METKA|EXOSOME complex component Rrp42|Methanopyrus kandleri (strain AV19 /

Query: 4 GEIFEKFHPI 13
G FE+F PI
Sbjct: 26 GRDFEEFRPI 35


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 YGEIFEKFHPI 13
YG+ E HP+
Sbjct: 416 YGDFLENNHPL 426


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 2 TYGEIFEKFHPI 13
YG+ E HP+
Sbjct: 436 NYGDFLENNHPL 447


>sp|WTPA_METJA|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YGEIFEKFHP 12
Y ++FEK HP
Sbjct: 55 YEKMFEKEHP 64


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 YGEIFEKFHPI 13
YG+ E HP+
Sbjct: 416 YGDFLENNHPL 426


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 YGEIFEKFHPI 13
+GE E HP+
Sbjct: 449 FGEFIENNHPL 459


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 3 YGEIFEKFHPI 13
YG+ E HP+
Sbjct: 420 YGDFLENNHPL 430


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 3 YGEIFEKFHPI 13
YG+ E HP+
Sbjct: 416 YGDFLENNHPL 426


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 YGEIFEKFHPIR 14
YGEI K PIR
Sbjct: 15 YGEIGLKSDPIR 26


>sp|MVK_THEKO|MEVALONATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KTYGEIFEKFHPI 13
K Y E+ E F PI
Sbjct: 211 KNYEEMPEIFEPI 223


>sp|KTHY_THESM|PROBABLE thymidylate kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 KTYGEIFEKFHPIR 14
K Y ++ EKF+ IR
Sbjct: 168 KNYLKLAEKFNEIR 181


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TYGE---IFEKFHPI 13
T GE I EKFHP+
Sbjct: 1637 TLGEKVRIEEKFHPL 1651


>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 5 EIFEKFHPIR 14
E+FEKF I+
Sbjct: 584 EVFEKFLEIK 593


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 TYGEIFEKFH 11
YGE+ +FH
Sbjct: 257 VYGELLHEFH 266


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 1 KTYGEIFEKFHPI 13
+ Y IFEK H +
Sbjct: 271 ENYSGIFEKAHEL 283


>sp|RNP1_METBU|RIBONUCLEASE P protein component 1|Methanococcoides burtonii (strain DSM 6242

Query: 3 YGEIFEKFHP 12
Y E+FE +P
Sbjct: 17 YAEVFESTNP 26


>sp|DNAJ_METMZ|CHAPERONE protein DnaJ|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 KTYGEIFEKFHPIR 14
KTY ++ ++HP R
Sbjct: 24 KTYRKLALQYHPDR 37


>sp|DNAJ_METMA|CHAPERONE protein DnaJ|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KTYGEIFEKFHPIR 14
KTY ++ ++HP R
Sbjct: 24 KTYRKLALQYHPDR 37


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 YGEIFEKFHPI 13
Y E E+F PI
Sbjct: 353 YNEFIEEFDPI 363


>sp|SYH_SACS2|HISTIDINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GEIFEKFHP 12
G IFE HP
Sbjct: 277 GLIFEVLHP 285


>sp|SYH_SACI1|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 GEIFEKFHP 12
G IFE HP
Sbjct: 277 GLIFEVLHP 285


>sp|SYH_SACSH|HISTIDINE--TRNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 4 GEIFEKFHP 12
G IFE HP
Sbjct: 277 GLIFEVLHP 285


>sp|SYH_SACI7|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 GEIFEKFHP 12
G IFE HP
Sbjct: 277 GLIFEVLHP 285


>sp|SYH_SACI6|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 GEIFEKFHP 12
G IFE HP
Sbjct: 277 GLIFEVLHP 285


>sp|SYH_SACI4|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 GEIFEKFHP 12
G IFE HP
Sbjct: 277 GLIFEVLHP 285


>sp|SYH_SACI2|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 GEIFEKFHP 12
G IFE HP
Sbjct: 277 GLIFEVLHP 285


>sp|SYH_SACI3|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 GEIFEKFHP 12
G IFE HP
Sbjct: 277 GLIFEVLHP 285


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KTYGEIFEKFHPIR 14
KTY ++ ++HP R
Sbjct: 24 KTYRKLALQYHPDR 37


>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 1 KTYGEIFEKFHPIR 14
K+Y ++ K+HP R
Sbjct: 24 KSYRKLALKYHPDR 37


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 1 KTYGEIFEKFHPI 13
K G+I K HP+
Sbjct: 279 KRIGKILAKEHPV 291


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 4 GEIFEKFHPI 13
GE+++ FH +
Sbjct: 311 GELYKSFHEL 320


>sp|SYH_SULAC|HISTIDINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 GEIFEKFHP 12
G IFE HP
Sbjct: 275 GVIFEVIHP 283


>sp|ENDA_METMP|TRNA-SPLICING endonuclease|Methanococcus maripaludis (strain DSM 14266

Query: 1 KTYGEIFEKF 10
K YGE+ E F
Sbjct: 32 KRYGELHENF 41


>sp|HYD1D_PYRFU|SULFHYDROGENASE 1 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KTYGEIFEKFHP 12
K YG+ KF P
Sbjct: 106 KVYGDAKVKFQP 117


>sp|AATB_THEPD|A-TYPE ATP synthase subunit B|Thermofilum pendens (strain DSM 2475

Query: 5 EIFEKFHP 12
+I EK+HP
Sbjct: 449 KIIEKYHP 456


>sp|RSMA_METTH|PROBABLE ribosomal RNA small subunit|Methanothermobacter thermautotrophicus

Query: 1 KTYGEIFEKFHPIR 14
KT + E FH IR
Sbjct: 217 KTSKSLRESFHEIR 230


>sp|Y068_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 3 YGEIFEKF 10
YG++FE F
Sbjct: 215 YGDVFEFF 222


>sp|ENDA_METVS|TRNA-SPLICING endonuclease|Methanococcus vannielii (strain ATCC 35089

Query: 1 KTYGEIFEKF 10
K YGE+ E F
Sbjct: 32 KRYGELHENF 41


>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GEIFEKFHP 12
G IFE HP
Sbjct: 275 GLIFEVLHP 283


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 YGEIFEKF 10
YGE+ +KF
Sbjct: 259 YGELVDKF 266


>sp|ILVE_ARCFU|PUTATIVE branched-chain-amino-acid aminotransferase|Archaeoglobus fulgidus

Query: 1 KTYGEIFEK 9
K YG+++EK
Sbjct: 120 KLYGDLYEK 128


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GEIFEKFH 11
GEI EKF+
Sbjct: 581 GEIVEKFN 588


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GEIFEKFHPI 13
GE+++ FH +
Sbjct: 311 GELYKSFHEL 320


>sp|PELO_THEVO|PROTEIN pelota homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GEIFEKF 10
GEI EKF
Sbjct: 321 GEIIEKF 327


>sp|Y939_METJA|UNCHARACTERIZED protein MJ0939|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KTYGEIFEKFHPI 13
KT+ E+FE+ I
Sbjct: 178 KTFDEMFERCREI 190


>sp|DHAS_METJA|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EIFEKFHPIR 14
E+ +KF P++
Sbjct: 269 EVMDKFDPLK 278






THE END