NDUBB_HUMAN Blast Output
Archaea
1|Sequence|1|10|MAAGLFGLSA

>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AAGLFGLSA 10
A G FG+SA
Sbjct: 622 AKGTFGISA 630




2|Sequence|6|15|FGLSARRLLA

>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGLSARRL 8
FG+SAR+L
Sbjct: 626 FGISARQL 633


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FGLSARRLL 9
FGL A RL+
Sbjct: 406 FGLGAERLI 414


>sp|SYD_PYRHO|ASPARTATE--TRNA(ASP) ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FGLSARRLL 9
FGL A RL+
Sbjct: 406 FGLGAERLI 414


>sp|SYD_PYRFU|ASPARTATE--TRNA(ASP) ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FGLSARRLL 9
FGL A RL+
Sbjct: 406 FGLGAERLI 414


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 FGLSARRLL 9
FGL A RL+
Sbjct: 406 FGLGAERLI 414




3|Sequence|11|20|RRLLAAAATR

***** No hits found ******


4|Sequence|16|25|AAATRGLPAA

>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AAATRGLPAA 10
AAAT LP A
Sbjct: 222 AAATTSLPEA 231


>sp|PURQ_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AAATRGLP 8
AAA RG+P
Sbjct: 76 AAAERGIP 83


>sp|DPHB_METB6|DIPHTHINE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 AATRGLPAA 10
AA RG+P A
Sbjct: 99 AAERGIPTA 107




5|Sequence|21|30|GLPAARVRWE

>sp|GGPP_METMA|GERANYLGERANYL diphosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GLPAARVRW 9
G+PA V+W
Sbjct: 96 GMPAVHVKW 104


>sp|GGPS_SACS2|GERANYLGERANYL diphosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GLPAARVRW 9
GLP V+W
Sbjct: 95 GLPTVHVKW 103


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 1 GLPAARVRW 9
G+P A ++W
Sbjct: 163 GIPMANIKW 171


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 GLPAARVR 8
G+PA RVR
Sbjct: 980 GVPAERVR 987


>sp|AMTAB_ARCFU|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Archaeoglobus

Query: 1 GLPAARVR 8
G PAAR+R
Sbjct: 328 GTPAARLR 335


>sp|RL2_PYRAB|LARGE ribosomal subunit protein uL2|Pyrococcus abyssi (strain GE5 /

Query: 3 PAARVRWE 10
P ARVR+E
Sbjct: 57 PVARVRFE 64


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLPAARVRW 9
G+PA RW
Sbjct: 328 GIPARDYRW 336


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 1 GLPAARVRW 9
G+P + ++W
Sbjct: 167 GIPMSNIKW 175


>sp|DNLI_CENSY|DNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 GLPAARV 7
G+PAAR+
Sbjct: 74 GMPAARI 80


>sp|RL2_METKA|LARGE ribosomal subunit protein uL2|Methanopyrus kandleri (strain AV19

Query: 3 PAARVRWE 10
P ARVR+E
Sbjct: 58 PVARVRFE 65


>sp|PUR8_METTH|ADENYLOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GLPAARVRWE 10
G P RV WE
Sbjct: 11 GTPEMRVIWE 20


>sp|ACYP_AERPE|ACYLPHOSPHATASE pernix (strain ATCC 700893

Query: 1 GLPAARVR 8
G PAARVR
Sbjct: 74 GPPAARVR 81


>sp|COFE_HALSA|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GLPAAR 6
GLPAAR
Sbjct: 169 GLPAAR 174


>sp|COFE_HALS3|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GLPAAR 6
GLPAAR
Sbjct: 169 GLPAAR 174


>sp|COFE_NATPD|COENZYME F420:L-glutamate ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GLPAAR 6
GLPAAR
Sbjct: 167 GLPAAR 172




6|Sequence|26|35|RVRWESSFSR

>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 RVRWESSFSR 10
R+ W+ F+R
Sbjct: 103 RIEWDKGFAR 112


>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 RWESSFSR 10
+WES+F R
Sbjct: 256 KWESTFLR 263


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WESSFSR 10
WESS+ R
Sbjct: 261 WESSYVR 267


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RVRWESSFS 9
R +WE++FS
Sbjct: 5 REKWENNFS 13


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RVRWE 5
RVRWE
Sbjct: 674 RVRWE 678


>sp|RL24E_METS5|LARGE ribosomal subunit protein eL24|Metallosphaera sedula (strain ATCC

Query: 1 RVRWESSFSR 10
+++W +S+SR
Sbjct: 50 KLKWTTSYSR 59


>sp|RL24E_METM7|LARGE ribosomal subunit protein eL24|Methanococcus maripaludis (strain

Query: 1 RVRWESSFSR 10
+V+W ++F R
Sbjct: 48 KVKWTNTFKR 57




7|Sequence|31|40|SSFSRTVVAP

>sp|Y087_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 2 SFSRTVVAP 10
+F+RT++AP
Sbjct: 313 TFARTIIAP 321


>sp|RPO1C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus vannielii (strain ATCC

Query: 2 SFSRTVVAP 10
++SRTV+ P
Sbjct: 48 AYSRTVIEP 56




8|Sequence|36|45|TVVAPSAVAG

>sp|DPO4_METMJ|DNA polymerase IV|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 TVVAPSAVAG 10
T+V P VAG
Sbjct: 168 TIVRPDEVAG 177




9|Sequence|41|50|SAVAGKRPPE

>sp|SAT_IGNH4|SULFATE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 VAGKRPPE 10
+ GKRPPE
Sbjct: 355 MEGKRPPE 362


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 VAGKRPPE 10
+ G+RPPE
Sbjct: 343 LIGERPPE 350


>sp|SAT_THEON|SULFATE adenylyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 VAGKRPPE 10
+AG++PPE
Sbjct: 352 MAGEQPPE 359


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 SAVAGKRP 8
S +AGK+P
Sbjct: 410 SVIAGKKP 417


>sp|SAT_HYPBU|SULFATE adenylyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 VAGKRPPE 10
+ G+RPPE
Sbjct: 355 LEGQRPPE 362


>sp|RUBY_METJA|PUTATIVE rubrerythrin|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GKRPPE 10
GK PPE
Sbjct: 180 GKEPPE 185


>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 SAVAGKRPP 9
+ V G+RPP
Sbjct: 101 TGVIGERPP 109


>sp|TRPD_NATPD|ANTHRANILATE phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SAVAGKRPPE 10
SAVAG P E
Sbjct: 258 SAVAGGSPTE 267


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 3 VAGKRPPE 10
VAG+ PPE
Sbjct: 315 VAGEFPPE 322




10|Sequence|46|55|KRPPEPTTPW

>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 2 RPPEP 6
RPPEP
Sbjct: 524 RPPEP 528


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KRPPEPTTP 9
K PP P P
Sbjct: 258 KEPPSPDNP 266


>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 3 PPEPTTPW 10
PPEP T +
Sbjct: 112 PPEPITTY 119


>sp|NADE_STAMF|NH(3)-DEPENDENT NAD(+) synthetase|Staphylothermus marinus (strain ATCC 43588

Query: 3 PPEPTTPW 10
PP P+ PW
Sbjct: 260 PPIPSLPW 267


>sp|APGM_THEVO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 RPPEPTTP 9
+PPEP P
Sbjct: 171 KPPEPIRP 178


>sp|Y1316_THEGJ|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 2 RPPEPTTP 9
+P EP TP
Sbjct: 198 KPAEPETP 205


>sp|CAS4_METJA|CRISPR-ASSOCIATED exonuclease Cas4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRPPEP 6
K PPEP
Sbjct: 148 KEPPEP 153


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 3 PPEPTT 8
PPEP T
Sbjct: 111 PPEPIT 116


>sp|RF1_THEVO|PEPTIDE chain release factor subunit|Thermoplasma volcanium (strain ATCC

Query: 3 PPEPTT 8
PPEP T
Sbjct: 114 PPEPIT 119


>sp|RF1_THEAC|PEPTIDE chain release factor subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 PPEPTT 8
PPEP T
Sbjct: 114 PPEPIT 119


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RPPEP 6
RPPEP
Sbjct: 520 RPPEP 524


>sp|Y2370_ARCFU|UPF0148 protein AF_2370|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KRPPEPTTP 9
++PPE T P
Sbjct: 69 EKPPESTKP 77


>sp|CAS1_KORCO|CRISPR-ASSOCIATED endonuclease Cas1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 KRPPEPTTPW 10
K P P PW
Sbjct: 332 KEPTMPYIPW 341


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PPEPTTPW 10
PPE PW
Sbjct: 295 PPEIEIPW 302


>sp|RS15_PYRCJ|SMALL ribosomal subunit protein uS15|Pyrobaculum calidifontis (strain

Query: 2 RPPEPTTP 9
RPP PT P
Sbjct: 16 RPPHPTVP 23


>sp|G6PD_HALVD|NAD-DEPENDENT glucose-6-phosphate dehydrogenase|Haloferax volcanii (strain ATCC

Query: 4 PEPTTPW 10
P P PW
Sbjct: 78 PRPEAPW 84


>sp|THYX_PYRAE|FLAVIN-DEPENDENT thymidylate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KRPPEPTTPW 10
K P P TPW
Sbjct: 228 KHGPLPETPW 237


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 6 PTTPW 10
PT+PW
Sbjct: 290 PTSPW 294


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 PPEPTTPW 10
PPEPT +
Sbjct: 274 PPEPTAAF 281




11|Sequence|51|60|PTTPWQEDPE

>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PTTPWQEDP 9
P TPW ++P
Sbjct: 355 PETPWPQEP 363


>sp|Y485_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PWQEDPE 10
PW+ED E
Sbjct: 122 PWKEDTE 128


>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PWQEDPE 10
PWQE PE
Sbjct: 190 PWQEPPE 196


>sp|PRIS_PYRCJ|DNA primase small subunit PriS|Pyrobaculum calidifontis (strain DSM

Query: 4 PWQEDPE 10
PW+ED E
Sbjct: 70 PWEEDME 76


>sp|RL4_METS3|LARGE ribosomal subunit protein uL4|Methanobrevibacter smithii (strain

Query: 4 PWQEDPE 10
PW DPE
Sbjct: 45 PWGNDPE 51


>sp|CAH_METTT|CARBONIC anhydrase|Methanosarcina thermophila (strain ATCC 43570

Query: 1 PTTPWQEDP 9
P TPW +P
Sbjct: 49 PVTPWNPEP 57


>sp|AROC_THEKO|CHORISMATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PWQEDPE 10
PW+ED E
Sbjct: 216 PWEEDIE 222


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PTTPWQEDP 9
P PW E P
Sbjct: 193 PGEPWWESP 201


>sp|PURQ_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Haloquadratum walsbyi (strain DSM 16790

Query: 2 TTPWQEDPE 10
TTPW E E
Sbjct: 125 TTPWTEAYE 133


>sp|NNR_METKA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanopyrus kandleri (strain

Query: 4 PWQEDPE 10
PW +PE
Sbjct: 485 PWAAEPE 491


>sp|Y570_METJA|UNCHARACTERIZED protein MJ0570|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WQEDPE 10
W +DPE
Sbjct: 120 WHKDPE 125


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 5 WQEDPE 10
W EDPE
Sbjct: 25 WGEDPE 30


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PTTPWQEDP 9
P TPW + P
Sbjct: 214 PNTPWYQGP 222


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PTTPWQEDP 9
P TPW P
Sbjct: 197 PETPWYTGP 205


>sp|HMGCS_METJA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WQEDPE 10
W +DPE
Sbjct: 25 WNKDPE 30


>sp|HMEC_ARCPA|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus profundus

Query: 4 PWQEDPE 10
PW +PE
Sbjct: 281 PWDPNPE 287


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 4 PWQEDP 9
PW +DP
Sbjct: 344 PWYDDP 349


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 TPWQEDP 9
TPW+ P
Sbjct: 372 TPWRNPP 378


>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 PWQEDPE 10
PW ED E
Sbjct: 217 PWDEDIE 223




12|Sequence|56|65|QEDPEPEDEN

>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 3 DPEPEDEN 10
DPEP DEN
Sbjct: 201 DPEPIDEN 208


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DPEPEDEN 10
+PEP DEN
Sbjct: 202 NPEPNDEN 209


>sp|AATI_METTH|A-TYPE ATP synthase subunit I|Methanothermobacter thermautotrophicus

Query: 2 EDPEPED 8
EDP+PE+
Sbjct: 342 EDPDPEE 348


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DPEPEDEN 10
+PEP D+N
Sbjct: 202 NPEPNDQN 209


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 4 PEPEDEN 10
P PEDEN
Sbjct: 98 PNPEDEN 104


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PEPEDEN 10
P PEDEN
Sbjct: 88 PNPEDEN 94


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PEPEDEN 10
P PEDEN
Sbjct: 94 PNPEDEN 100


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 3 DPEPEDEN 10
+PEP D+N
Sbjct: 202 NPEPNDQN 209


>sp|PGMMM_THEKO|PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE kodakarensis (strain ATCC BAA-918

Query: 3 DPEPEDEN 10
+PEP +EN
Sbjct: 216 NPEPNEEN 223


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 2 EDPEPE 7
+DPEPE
Sbjct: 155 KDPEPE 160


>sp|AATD_HALLT|A-TYPE ATP synthase subunit D|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 EDPEPED 8
EDPEP D
Sbjct: 222 EDPEPAD 228


>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain ATCC

Query: 2 EDPEPEDE 9
EDP PE E
Sbjct: 414 EDPLPETE 421


>sp|RRP4_PYRAB|EXOSOME complex component Rrp4|Pyrococcus abyssi (strain GE5 /

Query: 1 QEDPEPEDE 9
+E+P+ EDE
Sbjct: 246 EEEPQGEDE 254


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 3 DPEPEDEN 10
+PEP D N
Sbjct: 202 NPEPNDTN 209




13|Sequence|61|70|PEDENLYEKN

>sp|HIS6_METM6|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 PEDENLYEKN 10
P DENL +KN
Sbjct: 139 PRDENLKDKN 148


>sp|KPRS_METTH|RIBOSE-PHOSPHATE pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 1 PEDENLYE 8
P+DENL E
Sbjct: 57 PQDENLME 64


>sp|HIS6_METM7|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 PEDENLYEKN 10
P++ENL +KN
Sbjct: 139 PQNENLKDKN 148


>sp|PSTB_METAC|PHOSPHATE import ATP-binding protein PstB|Methanosarcina acetivorans

Query: 2 EDENLYEK 9
EDE++YEK
Sbjct: 77 EDEDIYEK 84


>sp|KPRS_METS3|RIBOSE-PHOSPHATE pyrophosphokinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PEDENLYE 8
P+DENL E
Sbjct: 57 PQDENLME 64


>sp|KPRS_PYRAB|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus abyssi (strain GE5 /

Query: 1 PEDENLYE 8
P+DENL E
Sbjct: 57 PQDENLIE 64


>sp|Y1691_METAC|UPF0210 protein MA_1691|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PE--DENLYEK 9
PE +EN+YEK
Sbjct: 50 PEVFNENIYEK 60


>sp|Y3181_METBF|UPF0210 protein Mbar_A3181|Methanosarcina barkeri (strain Fusaro /

Query: 3 DENLYEK 9
+EN+YEK
Sbjct: 43 NENIYEK 49


>sp|HIS6_METM5|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 EDENLYEKN 10
+DENL +KN
Sbjct: 140 QDENLKDKN 148


>sp|BIOF_METVS|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus vannielii (strain

Query: 2 EDENLYEK 9
+DENLY K
Sbjct: 14 KDENLYRK 21


>sp|SUA5_SULTO|THREONYLCARBAMOYL-AMP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DENLYE 8
DENLYE
Sbjct: 288 DENLYE 293


>sp|CORA_METJA|COBALT/MAGNESIUM transport protein CorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PEDENLYE 8
P+DE LY+
Sbjct: 36 PKDEELYK 43


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PEDENLYEK 9
P D +LYEK
Sbjct: 40 PNDLSLYEK 48


>sp|Y169_METJA|UNCHARACTERIZED ATP-binding protein MJ0169|Methanocaldococcus jannaschii (strain

Query: 1 PEDENL 6
PEDEN+
Sbjct: 198 PEDENV 203


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PEDENL 6
PEDEN+
Sbjct: 96 PEDENM 101


>sp|HIS6_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 EDENLYEKN 10
+DENL KN
Sbjct: 140 QDENLKNKN 148


>sp|RL18_THEGJ|LARGE ribosomal subunit protein uL18|Thermococcus gammatolerans (strain

Query: 2 EDENLYEKN 10
EDE LY K
Sbjct: 159 EDETLYRKQ 167


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 PEDENL 6
PEDEN+
Sbjct: 100 PEDENM 105


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 ENLYEKN 10
ENLY KN
Sbjct: 392 ENLYAKN 398


>sp|Y1084_ARCFU|PUTATIVE antitoxin AF_1084|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EDENLY 7
EDENLY
Sbjct: 58 EDENLY 63


>sp|PUR7_METKA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 PEDENL 6
PEDENL
Sbjct: 19 PEDENL 24


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PEDENL 6
PEDEN+
Sbjct: 90 PEDENM 95




14|Sequence|66|75|LYEKNPDSHG

>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LYEKNPDSH 9
L E NPDSH
Sbjct: 454 LMETNPDSH 462


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LYEKNPDSH 9
LY+KNP H
Sbjct: 183 LYDKNPKRH 191


>sp|NNR_METHJ|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanospirillum hungatei JF-1

Query: 1 LYEKNPDSH 9
L +NPDSH
Sbjct: 224 LRNRNPDSH 232


>sp|PYRH_METB6|URIDYLATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 LYEKNPDSH 9
+Y+K+P SH
Sbjct: 145 IYDKDPKSH 153


>sp|Y1607_METJA|UNCHARACTERIZED glycosyltransferase MJ1607|Methanocaldococcus jannaschii (strain

Query: 1 LYEKNPDS 8
+Y KNPDS
Sbjct: 331 VYPKNPDS 338


>sp|GGGPS_METVS|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LYEKNPDS 8
L EKNPD+
Sbjct: 227 LTEKNPDA 234


>sp|RNH2_SACS2|RIBONUCLEASE HII|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LYEKNPD 7
YEKNP+
Sbjct: 177 FYEKNPN 183


>sp|MSRA_HALSA|PEPTIDE methionine sulfoxide reductase MsrA|Halobacterium salinarum (strain

Query: 2 YEKNPDS 8
+EKNPD+
Sbjct: 148 FEKNPDA 154


>sp|MSRA_HALS3|PEPTIDE methionine sulfoxide reductase MsrA|Halobacterium salinarum (strain

Query: 2 YEKNPDS 8
+EKNPD+
Sbjct: 148 FEKNPDA 154


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 2 YEKNPDS 8
YE NPD+
Sbjct: 107 YENNPDA 113


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 1 LYEKNPDS 8
LYE+ PD+
Sbjct: 424 LYERYPDT 431


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 LYEKNPDSH 9
+YE PD H
Sbjct: 405 VYENRPDQH 413


>sp|HDRE_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina thermophila

Query: 3 EKNPDSHG 10
EK+P HG
Sbjct: 76 EKSPHGHG 83


>sp|HIS2_PYRIL|PHOSPHORIBOSYL-ATP pyrophosphatase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 EKNPDSH 9
EKNP+S+
Sbjct: 19 EKNPESY 25


>sp|HIS2_PYRNV|PHOSPHORIBOSYL-ATP pyrophosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 EKNPDSH 9
EKNP+S+
Sbjct: 19 EKNPESY 25


>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LYEKNPDSH 9
+YE PD H
Sbjct: 407 VYEHRPDQH 415


>sp|FAEHP_METB6|BIFUNCTIONAL enzyme Fae/Hps|Methanoregula boonei (strain DSM 21154

Query: 1 LYEKNPDSHG 10
+YEK+ +HG
Sbjct: 151 VYEKDRAAHG 160


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 2 YEKNPDSH 9
+EKN D H
Sbjct: 460 FEKNTDHH 467


>sp|RL18_PYRAR|LARGE ribosomal subunit protein uL18|Pyrobaculum arsenaticum (strain DSM

Query: 1 LYEKNPDSH 9
L E+NPD++
Sbjct: 155 LKEENPDAY 163


>sp|Y967_METJA|UNCHARACTERIZED protein MJ0967|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYEKNPDSH 9
+Y+ NPD +
Sbjct: 86 IYDVNPDDY 94


>sp|RL18_ARCFU|LARGE ribosomal subunit protein uL18|Archaeoglobus fulgidus (strain ATCC

Query: 2 YEKNPDSHG 10
YE NP+ G
Sbjct: 154 YEMNPERFG 162


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 2 YEKNPDSH 9
+EKN D H
Sbjct: 461 FEKNTDYH 468


>sp|Y980_PYRAB|UPF0282 protein PYRAB09800|Pyrococcus abyssi (strain GE5 /

Query: 1 LYEKNPD 7
+ EKNPD
Sbjct: 197 IIEKNPD 203


>sp|Y593_PYRFU|UPF0282 protein PF0593|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LYEKNPD 7
+ EKNPD
Sbjct: 197 IIEKNPD 203


>sp|Y1002_PYRHO|UPF0282 protein PH1002|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LYEKNPD 7
+ EKNPD
Sbjct: 197 IIEKNPD 203


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 NPDSHG 10
NPD HG
Sbjct: 45 NPDIHG 50




15|Sequence|71|80|PDSHGYDKDP

>sp|KADL_METTH|ADENYLATE kinase homolog MTH_1663|Methanothermobacter thermautotrophicus

Query: 2 DSHGYDKDP 10
D HG D+ P
Sbjct: 84 DLHGLDRSP 92


>sp|THIM_METPE|HYDROXYETHYLTHIAZOLE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 DSHGYDKDP 10
DS G D DP
Sbjct: 140 DSAGLDGDP 148


>sp|RADA_METBU|DNA repair and recombination protein|Methanococcoides burtonii (strain

Query: 2 DSHGYDKDP 10
D HG + DP
Sbjct: 160 DKHGIEYDP 168


>sp|GRPE_THEVO|PROTEIN GrpE|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PDSHGYDKDP 10
P S Y KDP
Sbjct: 4 PSSSNYIKDP 13


>sp|Y487_THEAC|PROTEIN Ta0487|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PDSHGYD 7
PD+H YD
Sbjct: 169 PDTHYYD 175


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 PDSHGYDKD 9
P H YD D
Sbjct: 1780 PKKHKYDPD 1788


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PDSHGY 6
PD+HG+
Sbjct: 313 PDNHGF 318


>sp|OTC_STAMF|ORNITHINE carbamoyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 5 GYDKDP 10
GYD DP
Sbjct: 192 GYDPDP 197


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DSHGYDKD 9
++H YDKD
Sbjct: 437 EAHPYDKD 444


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 DSHGYDKD 9
D GYD+D
Sbjct: 760 DMEGYDRD 767


>sp|CARA_PYRAE|CARBAMOYL phosphate synthase small chain|Pyrobaculum aerophilum (strain ATCC

Query: 3 SHGYDKDP 10
+HGY DP
Sbjct: 280 NHGYAVDP 287




16|Sequence|76|85|YDKDPVLDVW

>sp|PYRC_PYRFU|DIHYDROOROTASE furiosus (strain ATCC 43587

Query: 1 YDKDPVLDVW 10
YDK+P+L V+
Sbjct: 238 YDKNPLLKVY 247


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YDKDPVLDVW 10
YDK LDVW
Sbjct: 78 YDKKLFLDVW 87


>sp|PGK_THEON|PHOSPHOGLYCERATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 YDKDPVLDV 9
+DK P+LD+
Sbjct: 296 FDKYPILDI 304


>sp|RL3_METLZ|LARGE ribosomal subunit protein uL3|Methanocorpusculum labreanum (strain

Query: 1 YDKDPVLDVW 10
Y K P+ +VW
Sbjct: 92 YGKHPLTEVW 101


>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DKDPVLDVW 10
D++P LD W
Sbjct: 269 DREPDLDEW 277


>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 YDKDP 5
YDKDP
Sbjct: 143 YDKDP 147


>sp|PYRH_METB6|URIDYLATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 YDKDP 5
YDKDP
Sbjct: 146 YDKDP 150


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 1 YDKDPVLDV 9
YDK P L V
Sbjct: 354 YDKKPTLTV 362


>sp|NPD_SULTO|NAD-DEPENDENT protein deacetylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YDKDPVLD 8
YD D VLD
Sbjct: 131 YDSDTVLD 138


>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YDKDPVLD 8
+DK PV+D
Sbjct: 153 FDKHPVVD 160


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YDKDPVLD 8
+DK PVLD
Sbjct: 359 FDKVPVLD 366


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YDKDPVLD 8
YD D VLD
Sbjct: 687 YDPDAVLD 694


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 2 DKDPVLDVW 10
+++P LD W
Sbjct: 267 EREPELDAW 275


>sp|PYRH_STAMF|URIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 YDKDPV 6
YDKDP+
Sbjct: 146 YDKDPL 151


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 YDKDPVLDVW 10
Y K+P+ D W
Sbjct: 155 YRKEPLADNW 164


>sp|RL3_HALSA|LARGE ribosomal subunit protein uL3|Halobacterium salinarum (strain ATCC

Query: 1 YDKDPVLDVW 10
Y K P+ +VW
Sbjct: 93 YGKKPLTEVW 102


>sp|RL3_HALS3|LARGE ribosomal subunit protein uL3|Halobacterium salinarum (strain ATCC

Query: 1 YDKDPVLDVW 10
Y K P+ +VW
Sbjct: 93 YGKKPLTEVW 102


>sp|RS6E_CALMQ|SMALL ribosomal subunit protein eS6|Caldivirga maquilingensis (strain

Query: 1 YDKDPVLDV 9
+DK+PV+ V
Sbjct: 123 WDKEPVIQV 131


>sp|MTRA1_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanobrevibacter ruminantium

Query: 2 DKDPVLDVW 10
DK P D W
Sbjct: 3 DKKPAADNW 11


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YDKDPVLDV 9
YDK P LD+
Sbjct: 107 YDKAPPLDL 115


>sp|PCP_PYRHO|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DKDPVLDV 9
DK+P +D+
Sbjct: 15 DKNPTMDI 22


>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 YDKDPVLDV 9
YDK P LD+
Sbjct: 107 YDKAPPLDL 115


>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YDKDPVLDV 9
YDK P LD+
Sbjct: 107 YDKAPPLDL 115


>sp|TRM1_THEAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma acidophilum

Query: 4 DPVLDVW 10
DP++ +W
Sbjct: 196 DPLISIW 202


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YDKDPVLDVW 10
Y K+P+ D W
Sbjct: 155 YRKEPLADDW 164


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM 22066

Query: 2 DKDPVLDVW 10
DKD ++D++
Sbjct: 259 DKDAIMDLY 267


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 KDPVLDV 9
KDP LDV
Sbjct: 33 KDPSLDV 39


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 YDKDPVLDVW 10
YDK L+VW
Sbjct: 78 YDKHLFLNVW 87


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 KDPVLDV 9
KDP LDV
Sbjct: 33 KDPSLDV 39


>sp|RL3_NATPD|LARGE ribosomal subunit protein uL3|Natronomonas pharaonis (strain ATCC

Query: 1 YDKDPVLDVW 10
Y K P+ +VW
Sbjct: 93 YGKRPLTEVW 102


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YDKDPVLD 8
Y DPVLD
Sbjct: 515 YRYDPVLD 522


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YDKDPVLDVW 10
YDK +D W
Sbjct: 78 YDKKLFIDTW 87


>sp|TRPA_SACS2|TRYPTOPHAN synthase alpha chain|Saccharolobus solfataricus (strain ATCC

Query: 1 YDKDPVLDVW 10
YDK LD+W
Sbjct: 56 YDKVKGLDIW 65




17|Sequence|81|90|VLDVWNMRLV

>sp|OTC_PYRIL|ORNITHINE carbamoyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 VWNMRLV 10
+WNM+LV
Sbjct: 186 LWNMKLV 192


>sp|Y119_METJA|UNCHARACTERIZED protein MJ0119|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDVWNMR 8
+D WNM+
Sbjct: 1 MDSWNMK 7


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 1 VLDVWNMRL 9
VLD WN+
Sbjct: 343 VLDKWNIEF 351


>sp|OTC_PYRAE|ORNITHINE carbamoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 VWNMRLV 10
+WN RLV
Sbjct: 186 LWNQRLV 192




18|Sequence|86|95|NMRLVFFFGV

>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RLVFFF 8
RLVFFF
Sbjct: 70 RLVFFF 75


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 VFFFGV 10
+FFFGV
Sbjct: 245 IFFFGV 250


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 NMRLVFFFG 9
N+RLV++ G
Sbjct: 157 NVRLVYYHG 165




19|Sequence|91|100|FFFGVSIILV

>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 FGVSIILV 10
FG+SI+LV
Sbjct: 512 FGISIVLV 519


>sp|ARGB_METPE|ACETYLGLUTAMATE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 FFGVSIILV 10
+ G+S++LV
Sbjct: 49 YIGISVVLV 57




20|Sequence|96|105|SIILVLGSTF

>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IILVLGSTF 10
+ILV+G+T+
Sbjct: 552 VILVVGNTY 560


>sp|HFLX_SACS2|GTPASE HflX|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SIILVLGSTF 10
++ILV+ STF
Sbjct: 260 ALILVIDSTF 269




21|Sequence|101|110|LGSTFVAYLP

>sp|DCDB_METMJ|DCTP deaminase, dUMP-forming|Methanoculleus marisnigri (strain ATCC

Query: 1 LGSTFVAYLP 10
LGS FV Y+P
Sbjct: 36 LGSHFVWYVP 45


>sp|NIFH_METMJ|NITROGENASE iron protein|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LGSTFVAYLP 10
+GS +AY+P
Sbjct: 201 IGSRLIAYIP 210


>sp|RNP1_METBU|RIBONUCLEASE P protein component 1|Methanococcoides burtonii (strain DSM 6242

Query: 2 GSTFVAYLP 10
G+TFV +LP
Sbjct: 59 GTTFVFHLP 67


>sp|NIFH_METHJ|NITROGENASE iron protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LGSTFVAYLP 10
+GS +AY+P
Sbjct: 201 VGSKIIAYIP 210


>sp|Y2030_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 5 FVAYLP 10
F+AYLP
Sbjct: 361 FIAYLP 366


>sp|TRMI_PYRAB|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 2 GSTFVAYLP 10
G FVAY P
Sbjct: 187 GGFFVAYTP 195


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 3 STFVAYLP 10
STF AY P
Sbjct: 339 STFAAYEP 346


>sp|RTCA_IGNH4|RNA 3'-terminal phosphate cyclase|Ignicoccus hospitalis (strain

Query: 1 LGSTFVAYLP 10
LGST + ++P
Sbjct: 68 LGSTEIVFIP 77


>sp|LYSJ_SULAC|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfolobus

Query: 2 GSTFVAYLP 10
GST + +LP
Sbjct: 349 GSTVIRFLP 357




22|Sequence|106|115|VAYLPDYRMK

>sp|HMGCS_METAR|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 10 AYVPQYRIK 18


>sp|HMGCS_SACS2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 10 AYIPRYRIK 18


>sp|HMGCS_METS3|HYDROXYMETHYLGLUTARYL-COA synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 9 AYVPSYRIK 17


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 18 AYVPKYRIK 26


>sp|HMGCS_METMA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 10 AYVPRYRIK 18


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 10 AYVPRYRIK 18


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 10 AYVPRYRIK 18


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 10 AYVPRYRIK 18


>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 10 AYVPRYRIK 18


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 10 AYVPRYRIK 18


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 10 AYVPRYRIK 18


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 10 AYVPRYRIK 18


>sp|HMGCS_METAC|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 10 AYVPRYRIK 18


>sp|HMGCS_METJA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 9 AYIPKYRIK 17


>sp|HMGCS_CALMQ|HYDROXYMETHYLGLUTARYL-COA synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 10 AYIPRYRIK 18


>sp|HMGCS_METKA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 14 AYVPRYRIK 22


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 18 AYVPMYRIK 26


>sp|HMGCS_METTL|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermococcus thermolithotrophicus

Query: 2 AYLPDYRMK 10
+Y+P YR+K
Sbjct: 11 SYIPKYRIK 19


>sp|HMGCS_METST|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 AYLPDYRMK 10
A++P YR+K
Sbjct: 9 AHIPSYRIK 17


>sp|HMGCS_PYRAE|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AYLPDYRMK 10
AY+P YR++
Sbjct: 11 AYIPKYRIR 19


>sp|HMGCS_METTH|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 YLPDYRMK 10
Y+P YR+K
Sbjct: 10 YIPSYRIK 17


>sp|HMGCS_PYRNV|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 AYLPDYRMK 10
AY+P YR++
Sbjct: 11 AYIPKYRIR 19


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 AYLPDYRMK 10
AY+P YR+K
Sbjct: 18 AYVPMYRIK 26


>sp|HMGCS_PYRAR|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 AYLPDYRMK 10
AY+P YR++
Sbjct: 10 AYIPKYRIR 18


>sp|HMGCS_PYRIL|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 AYLPDYRMK 10
AY+P YR++
Sbjct: 11 AYIPKYRIR 19


>sp|HMGCS_METBU|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 AYLPDYRMK 10
AY+P +R+K
Sbjct: 10 AYIPKFRIK 18


>sp|HMGCS_THEVO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 AYLPDYRMK 10
+Y+P YR+K
Sbjct: 9 SYIPRYRIK 17


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 YLPDYRMK 10
Y+P YR+K
Sbjct: 11 YIPRYRIK 18


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 AYLPDYRMK 10
+Y+P YR+K
Sbjct: 9 SYIPRYRIK 17


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YLPDYRMK 10
Y+PDY K
Sbjct: 44 YMPDYEGK 51


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YLPDYRMK 10
Y+PDY K
Sbjct: 44 YMPDYEGK 51


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 2 AYLPDYRMK 10
+Y+P YR+K
Sbjct: 10 SYVPKYRIK 18


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YLPDYRMK 10
Y+PDY K
Sbjct: 44 YMPDYEGK 51


>sp|HMGCS_SULAC|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 AYLPDYRM 9
AY+P YR+
Sbjct: 10 AYIPRYRI 17


>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 AYLPDYRMK 10
AY+P YR++
Sbjct: 11 AYIPRYRVR 19


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AYLPDYRMK 10
AY+P YR++
Sbjct: 18 AYVPMYRIR 26


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 AYLPDYRMK 10
AY+P YR++
Sbjct: 18 AYVPMYRIR 26


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 AYLPDYRMK 10
AY+P YR++
Sbjct: 18 AYVPMYRIR 26


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YLPDYRMK 10
Y P+YR+K
Sbjct: 458 YHPNYRVK 465


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 VAYLPDY 7
V +LPDY
Sbjct: 417 VKFLPDY 423


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 1 VAYLPDY 7
V +LPDY
Sbjct: 414 VKFLPDY 420


>sp|PIMT_PYRAE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 LPDYRM 9
LP+YRM
Sbjct: 34 LPEYRM 39


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 AYLPDYRMK 10
+Y+P YR++
Sbjct: 9 SYIPRYRIR 17


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VAYLPDY 7
V +LPDY
Sbjct: 413 VKFLPDY 419


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VAYLPDY 7
V +LPDY
Sbjct: 415 VKFLPDY 421


>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 2 AYLPDYRMK 10
AY+P +R+K
Sbjct: 18 AYVPMFRIK 26


>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AYLPDYRMK 10
AY+P YR+
Sbjct: 10 AYVPRYRLN 18




23|Sequence|111|120|DYRMKEWSRR

>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YRMKEWSRR 10
YR+++W RR
Sbjct: 466 YRLRKWQRR 474


>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 1 DYRMKEWSR 9
D RM++W+R
Sbjct: 401 DSRMQDWTR 409


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 4 MKEWSRR 10
M +WSRR
Sbjct: 1 MTDWSRR 7


>sp|RN393_SACS2|CRISPR system ring nuclease SSO1393|Saccharolobus solfataricus (strain

Query: 2 YRMKEWSRR 10
YR+K+W R+
Sbjct: 253 YRLKDWVRK 261


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 RMKEWSRR 10
R +EW+RR
Sbjct: 442 RAREWARR 449


>sp|TF2B_METTL|TRANSCRIPTION initiation factor IIB|Methanothermococcus thermolithotrophicus

Query: 2 YRMKEWSRR 10
YR+++W RR
Sbjct: 132 YRLRKWQRR 140


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 2 YRMKEWSRR 10
+R+KEW R
Sbjct: 210 HRIKEWDFR 218


>sp|TF2B_METM6|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C6 /

Query: 2 YRMKEWSRR 10
YR+++W RR
Sbjct: 132 YRLRKWQRR 140


>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DYRMKEWS 8
D R+KEW+
Sbjct: 79 DIRIKEWA 86


>sp|Y132_THEON|MEMO1 family protein TON_0132|Thermococcus onnurineus (strain NA1)

Query: 2 YRMKEWSRR 10
+R+KEW R
Sbjct: 210 HRVKEWDFR 218


>sp|TF2B_METM7|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C7 /

Query: 2 YRMKEWSRR 10
YR+++W RR
Sbjct: 132 YRLRKWQRR 140


>sp|PYRH_METLZ|URIDYLATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 YRMKEWS 8
+R+KEW+
Sbjct: 20 HRLKEWA 26


>sp|TF2B_METM5|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C5 /

Query: 2 YRMKEWSRR 10
YR+++W RR
Sbjct: 132 YRLRKWQRR 140


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 YRMKEWSRR 10
YR+++W RR
Sbjct: 127 YRLRKWQRR 135


>sp|TF2B_METMP|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain DSM 14266

Query: 2 YRMKEWSRR 10
YR+++W RR
Sbjct: 132 YRLRKWQRR 140


>sp|TF2B_METPE|TRANSCRIPTION initiation factor IIB|Methanosphaerula palustris (strain ATCC

Query: 2 YRMKEWSRR 10
YR+++W RR
Sbjct: 127 YRLRKWQRR 135


>sp|TF2B_METMJ|TRANSCRIPTION initiation factor IIB|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 YRMKEWSRR 10
YR+++W RR
Sbjct: 130 YRLRKWQRR 138


>sp|TF2B_METB6|TRANSCRIPTION initiation factor IIB|Methanoregula boonei (strain DSM 21154

Query: 2 YRMKEWSRR 10
YR+++W RR
Sbjct: 127 YRLRKWQRR 135


>sp|TF2B_METTP|TRANSCRIPTION initiation factor IIB|Methanothrix thermoacetophila (strain DSM

Query: 2 YRMKEWSRR 10
YR+++W RR
Sbjct: 130 YRLRKWQRR 138


>sp|Y1726_THEGJ|MEMO1 family protein TGAM_1726|Thermococcus gammatolerans (strain DSM

Query: 2 YRMKEWSRR 10
+R+KEW R
Sbjct: 210 HRIKEWDFR 218


>sp|TF2B_METMZ|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (Methanosarcina frisia)

Query: 2 YRMKEWSRR 10
YR+++W RR
Sbjct: 130 YRLRKWQRR 138


>sp|TF2B_METMA|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YRMKEWSRR 10
YR+++W RR
Sbjct: 130 YRLRKWQRR 138


>sp|TF2B_METAC|TRANSCRIPTION initiation factor IIB|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YRMKEWSRR 10
YR+++W RR
Sbjct: 130 YRLRKWQRR 138


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 DYRMKEW 7
D +MKEW
Sbjct: 407 DEQMKEW 413


>sp|FOLD_PYRCJ|BIFUNCTIONAL protein FolD|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 RMKEWSRR 10
+ KEW+RR
Sbjct: 9 KTKEWARR 16


>sp|FENR2_SULAC|FERREDOXIN--NADP reductase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DYRMKEW 7
D R+KEW
Sbjct: 79 DIRLKEW 85


>sp|DNAG_PICTO|DNA primase DnaG|Picrophilus torridus (strain ATCC 700027

Query: 4 MKEWSRR 10
+KEWS R
Sbjct: 281 LKEWSSR 287


>sp|YI48_METSM|INSERTION element ISM1 uncharacterized 48.3|Methanobrevibacter smithii

Query: 1 DYRMKEWSRR 10
DY+M+ W+ +
Sbjct: 387 DYQMQNWTEK 396


>sp|PYRF_PYRFU|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 MKEWSRR 10
+KEWS R
Sbjct: 205 VKEWSSR 211


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DYRMKEWSR 9
DYR EW+
Sbjct: 310 DYRYPEWAE 318


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 2 YRMKEWSRR 10
Y +KEW+++
Sbjct: 103 YLLKEWAKK 111


>sp|TF2B_METST|TRANSCRIPTION initiation factor IIB|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YRMKEWSRR 10
YR+++W R+
Sbjct: 104 YRLRKWQRK 112


>sp|TF2B_METS3|TRANSCRIPTION initiation factor IIB|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 YRMKEWSRR 10
YR+++W R+
Sbjct: 103 YRLRKWQRK 111


>sp|TF2B_METTH|TRANSCRIPTION initiation factor IIB|Methanothermobacter thermautotrophicus

Query: 2 YRMKEWSRR 10
YR+++W R+
Sbjct: 103 YRLRKWQRK 111


>sp|TF2B1_THEVO|TRANSCRIPTION initiation factor IIB 1|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YRMKEWSRR 10
YR+++W +R
Sbjct: 105 YRLRKWQKR 113


>sp|TF2B1_THEAC|TRANSCRIPTION initiation factor IIB 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YRMKEWSRR 10
YR+++W +R
Sbjct: 105 YRLRKWQKR 113


>sp|HMEC_ARCPA|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus

Query: 2 YRMKEWSR 9
YR+ +W+R
Sbjct: 25 YRVVDWAR 32




24|Sequence|116|125|EWSRREAERL

>sp|RL10_METKA|LARGE ribosomal subunit protein uL10|Methanopyrus kandleri (strain AV19

Query: 1 EWSRREAERL 10
EW RRE + L
Sbjct: 19 EWKRREVKEL 28


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 1 EWSRREAERL 10
EW ++E ER+
Sbjct: 1005 EWIKKEEERI 1014


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 2 WSRREAERL 10
+SRRE ERL
Sbjct: 6 FSRREMERL 14


>sp|IDI2_THEAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WSRREAERL 10
+SRR AERL
Sbjct: 195 FSRRTAERL 203


>sp|TRPG_THEKO|ANTHRANILATE synthase component 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EWSRREAERL 10
EW R+E R+
Sbjct: 172 EWERKEGLRI 181


>sp|RL14_NANEQ|LARGE ribosomal subunit protein uL14|Nanoarchaeum equitans (strain

Query: 1 EWSRREAERL 10
EW RR+ R+
Sbjct: 79 EWRRRDGTRI 88


>sp|Y279_THEVO|UPF0200 protein TV0279|Thermoplasma volcanium (strain ATCC 51530

Query: 2 WSRREAERL 10
W+RR AE++
Sbjct: 65 WARRTAEKI 73


>sp|SERB_ARCFU|PHOSPHOSERINE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RREAERL 10
RREAERL
Sbjct: 107 RREAERL 113


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WSRREAERL 10
+S+RE ERL
Sbjct: 530 YSKREFERL 538


>sp|PELO_METKA|PROTEIN pelota homolog|Methanopyrus kandleri (strain AV19 /

Query: 1 EWSRREAERL 10
EW R++ ER+
Sbjct: 112 EWERKDLERI 121


>sp|RL15E_STAMF|LARGE ribosomal subunit protein eL15|Staphylothermus marinus (strain ATCC

Query: 1 EWSRREAERL 10
+W R++ ERL
Sbjct: 187 KWKRKQKERL 196




25|Sequence|121|130|EAERLVKYRE

>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 3 ERLVKYRE 10
++LVKYRE
Sbjct: 134 KKLVKYRE 141


>sp|FLPA_PYRIL|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum islandicum (strain

Query: 2 AERLVKYRE 10
ERL+K+R+
Sbjct: 42 GERLIKWRD 50


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 EAERLVKYR 9
E +RLV YR
Sbjct: 747 ECDRLVPYR 755


>sp|LYSZ_PYRAE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum aerophilum

Query: 1 EAERLVKYRE 10
EAE+LVK E
Sbjct: 204 EAEKLVKSEE 213


>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 4 RLVKYR 9
RLVKYR
Sbjct: 59 RLVKYR 64




26|Sequence|126|135|VKYREANGLP

>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 4 REANGLP 10
R+ANGLP
Sbjct: 83 RDANGLP 89


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 KYREANGLP 10
+Y+ NGLP
Sbjct: 776 RYKTENGLP 784


>sp|TRUD_PYRAB|PROBABLE tRNA pseudouridine synthase D|Pyrococcus abyssi (strain GE5 /

Query: 3 YREANGLP 10
YR+A+G+P
Sbjct: 327 YRKAHGIP 334


>sp|PUR7_ARCFU|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 3 YREANGLP 10
+REA GLP
Sbjct: 279 WREAVGLP 286


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KYREANGLP 10
KY+ ++GLP
Sbjct: 751 KYKNSHGLP 759


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VKYREANGLP 10
V+ EANG+P
Sbjct: 675 VRIIEANGVP 684


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KYREANGLP 10
KYRE G P
Sbjct: 43 KYREILGFP 51


>sp|ASPGP_PYRCJ|PLANT-TYPE L-asparaginase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VKYREANGL 9
V+Y EA+GL
Sbjct: 51 VEYMEASGL 59


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KYREANGLP 10
KY+ ++G+P
Sbjct: 751 KYKNSHGMP 759


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 KYREANGLP 10
KY+ ++G+P
Sbjct: 751 KYKNSHGMP 759


>sp|TF2B_PYROC|TRANSCRIPTION initiation factor IIB|Pyrodictium occultum

Query: 3 YREANG 8
YR+ANG
Sbjct: 85 YRDANG 90




27|Sequence|131|140|ANGLPIMESN

>sp|HPRT_METV3|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus voltae (strain ATCC

Query: 2 NGLPIMESN 10
NG+ I+ESN
Sbjct: 179 NGVVILESN 187


>sp|RS5_METS3|SMALL ribosomal subunit protein uS5|Methanobrevibacter smithii (strain

Query: 3 GLPIME 8
GLPIME
Sbjct: 33 GLPIME 38


>sp|HACB_METMA|METHANOGEN homoaconitase small subunit|Methanosarcina mazei (strain ATCC

Query: 3 GLPIMESN 10
GLP+ME++
Sbjct: 102 GLPLMEAD 109


>sp|HACB2_METAC|METHANOGEN homoaconitase small subunit 2|Methanosarcina acetivorans (strain

Query: 3 GLPIMESN 10
GLP+ME++
Sbjct: 101 GLPLMEAD 108


>sp|RS5_META3|SMALL ribosomal subunit protein uS5|Methanococcus aeolicus (strain ATCC

Query: 2 NGLPIME 8
NGLP++E
Sbjct: 37 NGLPLLE 43


>sp|HACB1_METAC|METHANOGEN homoaconitase small subunit 1|Methanosarcina acetivorans (strain

Query: 3 GLPIMESN 10
GLP+ME++
Sbjct: 102 GLPLMEAD 109


>sp|RS5_METST|SMALL ribosomal subunit protein uS5|Methanosphaera stadtmanae (strain

Query: 3 GLPIME 8
GLPIME
Sbjct: 47 GLPIME 52


>sp|FEN_THEAC|FLAP endonuclease 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NGLPIMESN 10
+G+P+M+S+
Sbjct: 43 DGMPLMDSH 51


>sp|HPRL2_HALWD|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ANGLPIME 8
+NG+P++E
Sbjct: 27 SNGVPVLE 34


>sp|HPRL2_HALWC|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16854

Query: 1 ANGLPIME 8
+NG+P++E
Sbjct: 27 SNGVPVLE 34


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 1 ANGLPI 6
ANGLP+
Sbjct: 85 ANGLPV 90


>sp|HIS8_THEKO|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 NGLPIME 8
NG+P++E
Sbjct: 114 NGIPVIE 120


>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NGLPIMESN 10
+GLP+++ N
Sbjct: 464 SGLPVIDKN 472




28|Sequence|136|145|IMESNCFDPS

>sp|NFI_IGNH4|ENDONUCLEASE V|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IMESNCFDP 9
+ E +CFDP
Sbjct: 19 VKEEDCFDP 27


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IMESNCFDPS 10
+M NCF P+
Sbjct: 215 VMAMNCFGPT 224


>sp|Y709_METMP|PROBABLE minor pilin MMP0709|Methanococcus maripaludis (strain DSM 14266

Query: 2 MESNCFD 8
MESNCF+
Sbjct: 153 MESNCFE 159


>sp|BIOB_NATPD|BIOTIN synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 ESNCFDP 9
E+N FDP
Sbjct: 335 EANTFDP 341


>sp|TH11_HALSA|PROBABLE transposase for insertion sequence|Halobacterium salinarum (strain

Query: 4 SNCFDPS 10
S C+DP+
Sbjct: 148 SKCYDPT 154


>sp|TH11_HALS3|PROBABLE transposase for insertion sequence|Halobacterium salinarum (strain

Query: 4 SNCFDPS 10
S C+DP+
Sbjct: 148 SKCYDPT 154




29|Sequence|141|153|CFDPSKIQLPEDE

>sp|G1PDH_METTH|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 3 DPSKIQLPED 12
DP KIQLP +
Sbjct: 2 DPRKIQLPRE 11


>sp|ECFA_METTH|ENERGY-COUPLING factor transporter ATP-binding protein|Methanothermobacter

Query: 2 FDPSKIQLPEDE 13
F P + LPEDE
Sbjct: 102 FGPMNLGLPEDE 113


>sp|SFSA_PICTO|SUGAR fermentation stimulation protein homolog|Picrophilus torridus

Query: 1 CFDPSKIQLPE 11
CF P+K + PE
Sbjct: 178 CFTPNKCRDPE 188


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 7 IQLPEDE 13
+QLPEDE
Sbjct: 132 VQLPEDE 138


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 DPSKIQLPEDE 13
DP ++LP DE
Sbjct: 392 DPDTMRLPLDE 402


>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 DPSKIQLPED 12
DP+ ++LP D
Sbjct: 300 DPAVVELPSD 309


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 3 DPSKIQLPEDE 13
D SKI L EDE
Sbjct: 55 DISKIALSEDE 65


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 FDPSKIQLPEDE 13
F P +++PE+E
Sbjct: 107 FGPINLEMPEEE 118


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 FDPSKIQL 9
F+PS IQL
Sbjct: 283 FEPSSIQL 290


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FDPSKIQL 9
F+PS IQL
Sbjct: 283 FEPSSIQL 290


>sp|PYRF_HALSA|OROTIDINE 5'-phosphate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 2 FDPSKIQLPED 12
DP +LPED
Sbjct: 22 LDPDMERLPED 32


>sp|PYRF_HALS3|OROTIDINE 5'-phosphate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 2 FDPSKIQLPED 12
DP +LPED
Sbjct: 22 LDPDMERLPED 32


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 4 PSKIQLPE 11
PSK+ LP+
Sbjct: 322 PSKVDLPQ 329


>sp|THSA_THEAC|THERMOSOME subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DPSKIQ 8
DPSKIQ
Sbjct: 258 DPSKIQ 263


>sp|RADA_AERPX|DNA repair and recombination protein|Aeropyrum pernix

Query: 7 IQLPEDE 13
+QLPED+
Sbjct: 128 VQLPEDK 134


>sp|RADA_AERPE|DNA repair and recombination protein|Aeropyrum pernix (strain ATCC

Query: 7 IQLPEDE 13
+QLPED+
Sbjct: 128 VQLPEDK 134


>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FDPSKIQLPE 11
FDPS PE
Sbjct: 124 FDPSYYSYPE 133


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 DPSKIQL 9
DPSKI+L
Sbjct: 68 DPSKIRL 74


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 DPSKIQL 9
DPSKI+L
Sbjct: 68 DPSKIRL 74


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 DPSKIQL 9
DPSKI+L
Sbjct: 68 DPSKIRL 74


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 DPSKIQL 9
DPSKI+L
Sbjct: 68 DPSKIRL 74


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 DPSKIQL 9
DPSKI+L
Sbjct: 68 DPSKIRL 74


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 DPSKIQL 9
DPSKI+L
Sbjct: 68 DPSKIRL 74


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FDPSKIQLPE 11
+DP + LPE
Sbjct: 433 YDPKDVYLPE 442


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 4 PSKIQLP 10
PSK++LP
Sbjct: 198 PSKVKLP 204


>sp|GGGPS_SULTO|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FDPSKIQL 9
FDP K+ L
Sbjct: 20 FDPDKVDL 27


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DPSKIQ 8
DPSKIQ
Sbjct: 903 DPSKIQ 908


>sp|RL10_METVO|LARGE ribosomal subunit protein uL10|Methanococcus voltae

Query: 2 FDPSKIQLPEDE 13
+DP +++ EDE
Sbjct: 206 YDPEILKIDEDE 217


>sp|Y066_SACS2|MEMO1 family protein SSO0066|Saccharolobus solfataricus (strain ATCC

Query: 2 FDPSKIQLPEDE 13
+DP +I + +DE
Sbjct: 200 YDPHEITMKKDE 211


>sp|SRP54_THEAC|SIGNAL recognition particle 54 kDa|Thermoplasma acidophilum (strain ATCC

Query: 3 DPSKIQLPEDE 13
D SKIQ ED+
Sbjct: 360 DDSKIQSAEDK 370


>sp|TF2B_METKA|TRANSCRIPTION initiation factor IIB|Methanopyrus kandleri (strain AV19 /

Query: 5 SKIQLPE 11
SK+QLPE
Sbjct: 130 SKLQLPE 136


>sp|PPAC_ARCFU|PROBABLE manganese-dependent inorganic pyrophosphatase|Archaeoglobus

Query: 2 FDPSKIQLPED 12
FD + +++P+D
Sbjct: 138 FDKTGVEIPKD 148


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 3 DPSKIQLPE 11
DPS ++ PE
Sbjct: 439 DPSAVETPE 447


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 3 DPSKIQLPE 11
DPS ++ PE
Sbjct: 439 DPSAVETPE 447


>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 2 FDPSKIQLPE 11
FDP K +PE
Sbjct: 318 FDPFKDAVPE 327


>sp|TRMY_HALLT|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halorubrum lacusprofundi

Query: 3 DPSKIQLPED 12
DP+ +QL ED
Sbjct: 131 DPTLVQLHED 140


>sp|IF5A_META3|TRANSLATION initiation factor 5A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FDPSKIQLPED 12
FD +I +PED
Sbjct: 94 FDTLEIPMPED 104


>sp|MSRA_HALWD|PEPTIDE methionine sulfoxide reductase MsrA|Haloquadratum walsbyi (strain

Query: 2 FDPSKIQLPE 11
+DP+KI+ E
Sbjct: 60 YDPTKIEYSE 69


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 SKIQLPEDE 13
SK+ +PE+E
Sbjct: 119 SKVPVPEEE 127


>sp|Y2134_SACI3|MEMO1 family protein M1627_2134|Saccharolobus islandicus (strain M.16.27)

Query: 2 FDPSKIQLPEDE 13
+DP +I + +DE
Sbjct: 200 YDPHEITVKKDE 211


>sp|Y2061_SACI6|MEMO1 family protein M164_2061|Saccharolobus islandicus (strain M.16.4 /

Query: 2 FDPSKIQLPEDE 13
+DP +I + +DE
Sbjct: 200 YDPHEITVKKDE 211


>sp|Y2054_SACI4|MEMO1 family protein M1425_2054|Saccharolobus islandicus (strain M.14.25

Query: 2 FDPSKIQLPEDE 13
+DP +I + +DE
Sbjct: 200 YDPHEITVKKDE 211


>sp|PYRB_HALSA|ASPARTATE carbamoyltransferase catalytic subunit|Halobacterium salinarum

Query: 4 PSKIQLPED 12
P +QLP D
Sbjct: 184 PESLQLPRD 192






THE END