1|Sequence|1|10|MPDSWDKDVY
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 1 MPDSWDKDVY 10
PD W KD Y
Sbjct: 180 FPDQWIKDFY 189
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 1 MPDSWDKDVY 10
PD W KD Y
Sbjct: 180 FPDQWIKDFY 189
>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)
Query: 1 MPDSWDKDVY 10
PD W KD Y
Sbjct: 180 FPDQWIKDFY 189
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 1 MPDSWDKDVY 10
PD W KD Y
Sbjct: 180 FPDQWIKDFY 189
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 2 PDSWDKDV 9
P++W +DV
Sbjct: 312 PEAWKRDV 319
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 2 PDSWDKDV 9
P++W +DV
Sbjct: 312 PEAWKRDV 319
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 2 PDSWDKDV 9
P++W +DV
Sbjct: 312 PEAWKRDV 319
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 2 PDSWDKDV 9
P++W +DV
Sbjct: 312 PEAWKRDV 319
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 2 PDSWDKDV 9
P++W +DV
Sbjct: 312 PEAWKRDV 319
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 MPDSWDKDVY 10
MP + D+D Y
Sbjct: 554 MPSASDRDGY 563
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 MPDSWDKDVY 10
MP + D+D Y
Sbjct: 554 MPSASDRDGY 563
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 MPDSWDKDVY 10
MP + D+D Y
Sbjct: 554 MPSASDRDGY 563
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 PDSWDK 7
PD WD+
Sbjct: 2035 PDVWDE 2040
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 SWDKDVY 10
SW+ D+Y
Sbjct: 6950 SWNADLY 6956
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 SWDKDVY 10
SW+ D+Y
Sbjct: 6973 SWNADLY 6979
>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)
Query: 2 PDSWDKDVY 10
PD KDVY
Sbjct: 341 PDEPQKDVY 349
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 DSWDKD 8
D WDK+
Sbjct: 1561 DKWDKE 1566
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 DSWDKD 8
D WDK+
Sbjct: 1561 DKWDKE 1566
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 DSWDKD 8
D WDK+
Sbjct: 1561 DKWDKE 1566
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 DSWDKD 8
D WDK+
Sbjct: 1561 DKWDKE 1566
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 DSWDKD 8
D WDK+
Sbjct: 1561 DKWDKE 1566
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 DSWDKD 8
D WD+D
Sbjct: 1335 DYWDED 1340
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 MPDSWDKD 8
+PDS D D
Sbjct: 1766 LPDSEDTD 1773
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 MPDSWDKD 8
+PDS D D
Sbjct: 1766 LPDSEDTD 1773
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 PDSWDKDVY 10
PD + DVY
Sbjct: 971 PDVFRSDVY 979
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 PDSWD 6
P SWD
Sbjct: 743 PSSWD 747
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 SWDKDVY 10
SW KDV+
Sbjct: 1975 SWLKDVW 1981
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 SWDKDVY 10
SW KDV+
Sbjct: 1975 SWLKDVW 1981
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 3 DSWDKDVY 10
+ WD+D++
Sbjct: 99 EKWDEDLF 106
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 SWDKDVY 10
SW KDV+
Sbjct: 1975 SWLKDVW 1981
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 SWDKDVY 10
SW KDV+
Sbjct: 1975 SWLKDVW 1981
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 SWDKDV 9
+W+KD+
Sbjct: 243 TWNKDI 248
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 SWDKDV 9
+W+KD+
Sbjct: 244 TWNKDI 249
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 4 SWDKDV 9
+W+KD+
Sbjct: 244 TWNKDI 249
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 SWDKDV 9
+W+KD+
Sbjct: 243 TWNKDI 248
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 SWDKDVY 10
SW KDV+
Sbjct: 1973 SWLKDVW 1979
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 SWDKDV 9
+W+KD+
Sbjct: 244 TWNKDI 249
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 SWDKDV 9
+W+KD+
Sbjct: 243 TWNKDI 248
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 SWDKDV 9
+W+KD+
Sbjct: 244 TWNKDI 249
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 DSWDKD 8
D W+KD
Sbjct: 190 DQWEKD 195
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 WDKDVY 10
+DKD+Y
Sbjct: 58 YDKDIY 63
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 3 DSWDKDVY 10
+ WD+D++
Sbjct: 99 EKWDEDLF 106
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 3 DSWDKDVY 10
+ WD+D++
Sbjct: 99 EKWDEDLF 106
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 SWDKD 8
SWDK+
Sbjct: 385 SWDKN 389
2|Sequence|6|15|DKDVYPEPPR
>sp|E3B14_ADE12|EARLY E3B 12.7 kDa protein|Human adenovirus A serotype 12
Query: 4 VYPEPPR 10
V+PEPPR
Sbjct: 89 VFPEPPR 95
>sp|UL130_HCMVA|UNCHARACTERIZED protein UL130|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 VYPEPPR 10
+YP PPR
Sbjct: 60 LYPSPPR 66
>sp|UL130_HCMVM|ENVELOPE glycoprotein UL130|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 VYPEPPR 10
+YP PPR
Sbjct: 60 LYPSPPR 66
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 1 DKDVYP 6
DKD YP
Sbjct: 531 DKDAYP 536
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 VYPEPP 9
+YP PP
Sbjct: 161 LYPRPP 166
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 VYPEPP 9
+YP PP
Sbjct: 161 LYPRPP 166
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 1 DKDVYPEPP 9
D DV+ EPP
Sbjct: 309 DLDVFEEPP 317
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 1 DKDVYPEPP 9
D DV+ EPP
Sbjct: 309 DLDVFEEPP 317
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 DKDVYPEPP 9
D D+Y PP
Sbjct: 1231 DSDIYSLPP 1239
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 4 VYPEPP 9
+YPE P
Sbjct: 272 IYPEKP 277
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 YPEPPR 10
Y EPP+
Sbjct: 805 YSEPPK 810
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 YPEPPR 10
Y EPP+
Sbjct: 805 YSEPPK 810
Query: 1 DKDVYP 6
D D+YP
Sbjct: 6893 DNDLYP 6898
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 YPEPPR 10
YP+P R
Sbjct: 4869 YPDPSR 4874
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 YPEPPR 10
YP+P R
Sbjct: 5234 YPDPSR 5239
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 YPEPPR 10
YP+P R
Sbjct: 5254 YPDPSR 5259
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 YPEPPR 10
YP+P R
Sbjct: 5284 YPDPSR 5289
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 YPEPPR 10
YP+P R
Sbjct: 4894 YPDPSR 4899
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 2 KDVYPE 7
+DVYPE
Sbjct: 456 RDVYPE 461
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 YPEPPR 10
YP+P R
Sbjct: 5200 YPDPSR 5205
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DKDVYPE 7
DK+V+PE
Sbjct: 190 DKEVFPE 196
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 YPEPPR 10
YP+P R
Sbjct: 5209 YPDPSR 5214
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DKDVYPE 7
DK+V+PE
Sbjct: 190 DKEVFPE 196
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DKDVYPE 7
DK+V+PE
Sbjct: 190 DKEVFPE 196
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 KDVYPEPP 9
KDV+ PP
Sbjct: 2623 KDVFFTPP 2630
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 KDVYPEPP 9
KDV+ PP
Sbjct: 2622 KDVFFTPP 2629
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 YPEPPR 10
YP+P R
Sbjct: 5223 YPDPSR 5228
>sp|VE7_HPV33|PROTEIN E7|Human papillomavirus 33
Query: 3 DVYPEP 8
D+YPEP
Sbjct: 14 DLYPEP 19
>sp|UL61_HCMVA|UNCHARACTERIZED protein UL61|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DKDVYPEPPR 10
+ PEPPR
Sbjct: 116 GRGAQPEPPR 125
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 DKDVYP 6
DKD+YP
Sbjct: 487 DKDLYP 492
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 DKDVYPEP 8
DKD P P
Sbjct: 28 DKDTGPPP 35
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 2 KDVYPEPPR 10
KD + +PP+
Sbjct: 228 KDTHLQPPQ 236
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 1 DKDVYP 6
DK++YP
Sbjct: 299 DKELYP 304
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 1 DKDVYP 6
DK++YP
Sbjct: 299 DKELYP 304
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 5 YPEPPR 10
Y EPP+
Sbjct: 453 YEEPPK 458
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 5 YPEPPR 10
Y EPP+
Sbjct: 453 YEEPPK 458
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 1 DKDVYP 6
DK++YP
Sbjct: 300 DKELYP 305
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 1 DKDVYP 6
DK++YP
Sbjct: 300 DKELYP 305
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 DKDVYP 6
DK++YP
Sbjct: 300 DKELYP 305
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DKDVYP 6
DK++YP
Sbjct: 300 DKELYP 305
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 DKDVYP 6
DK++YP
Sbjct: 300 DKELYP 305
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 1 DKDVYP 6
DK++YP
Sbjct: 300 DKELYP 305
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 DVYPEPP 9
DV+PEP
Sbjct: 1716 DVHPEPA 1722
Query: 3 DVYPEPP 9
DV+PEP
Sbjct: 1730 DVHPEPA 1736
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 DKDVYPEPP 9
+ DVY PP
Sbjct: 1238 ESDVYSLPP 1246
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 6 PEPPR 10
PEPPR
Sbjct: 491 PEPPR 495
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 6 PEPPR 10
PEPPR
Sbjct: 491 PEPPR 495
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 DKDVYPEPP 9
+ DVY PP
Sbjct: 1238 ESDVYSLPP 1246
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 DKDVYPEPP 9
D+DV PE P
Sbjct: 303 DEDVMPELP 311
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 DKDVYPEPP 9
D+DV PE P
Sbjct: 303 DEDVMPELP 311
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 DKDVYPEPP 9
D+DV PE P
Sbjct: 302 DEDVMPELP 310
3|Sequence|11|20|PEPPRRTPVQ
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PEPPRRT 7
PEPPR T
Sbjct: 24 PEPPRET 30
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PEPPRRT 7
PEPPR T
Sbjct: 24 PEPPRET 30
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PEPPRRT 7
PEPPR T
Sbjct: 24 PEPPRET 30
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 PPRRTP 8
PPRR P
Sbjct: 14 PPRRVP 19
Query: 1 PEPPRR 6
PE PRR
Sbjct: 906 PEAPRR 911
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 PEPPRRTP 8
P PPR P
Sbjct: 821 PRPPRAVP 828
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 PEPPRRTP 8
P PPR P
Sbjct: 848 PRPPRAVP 855
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 PEPPRRTP 8
P PPR P
Sbjct: 821 PRPPRAVP 828
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 PEPPRRTP 8
P PPR P
Sbjct: 853 PRPPRAVP 860
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 PEPPRRTP 8
P PPR P
Sbjct: 848 PRPPRAVP 855
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 PEPPRRTP 8
P PPR P
Sbjct: 849 PRPPRAVP 856
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 PEPPRRTP 8
P PPR P
Sbjct: 849 PRPPRAVP 856
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 PEPPRR 6
PE PRR
Sbjct: 904 PEAPRR 909
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 PEPPRRT 7
P PPRR+
Sbjct: 134 PNPPRRS 140
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 PEPPRR 6
PE PRR
Sbjct: 904 PEAPRR 909
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 PEPPRR 6
PE PRR
Sbjct: 904 PEAPRR 909
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 PEPPRR 6
PE PRR
Sbjct: 904 PEAPRR 909
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 PEPPRRT 7
P PPRR+
Sbjct: 134 PNPPRRS 140
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 PEPPRRT 7
P PPRR+
Sbjct: 134 PNPPRRS 140
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 PEPPRR 6
PE PRR
Sbjct: 904 PEAPRR 909
>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PEPPRRTPV 9
P PPR TPV
Sbjct: 158 PAPPRFTPV 166
>sp|US8A_HHV11|PROTEIN US8.5|Human herpesvirus 1 (strain 17)
Query: 1 PEPPRRTP 8
PE PRR+P
Sbjct: 55 PEAPRRSP 62
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 PPRRTPV 9
P R TPV
Sbjct: 3538 PKRNTPV 3544
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 1 PEPPRR--TPVQ 10
P PPRR TP+Q
Sbjct: 241 PTPPRRTSTPIQ 252
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 EPPRRTP 8
EP RR+P
Sbjct: 397 EPERRSP 403
>sp|US8A_HHV1F|US8.5 protein|Human herpesvirus 1 (strain F)
Query: 1 PEPPRRTP 8
PE PRR+P
Sbjct: 55 PEAPRRSP 62
>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38
Query: 1 PEPPRRT 7
P PPRRT
Sbjct: 242 PTPPRRT 248
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 1 PEPPRRT 7
P PPRRT
Sbjct: 241 PTPPRRT 247
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 PEPPRRT 7
P PPR T
Sbjct: 801 PRPPRAT 807
>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14
Query: 1 PEPPRRT 7
P PPRRT
Sbjct: 241 PTPPRRT 247
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 3 PPRRTPVQ 10
PPRR PV
Sbjct: 1296 PPRREPVD 1303
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 1 PEPPRRT 7
PEPPR++
Sbjct: 491 PEPPRQS 497
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 EPPRRTPV 9
+ PR+TPV
Sbjct: 468 DTPRKTPV 475
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 1 PEPPRRT 7
PEPPR++
Sbjct: 491 PEPPRQS 497
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 PEPPRRTPV 9
PE PRR V
Sbjct: 904 PEAPRRFMV 912
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 PEPPRRTPVQ 10
P PPR Q
Sbjct: 827 PRPPRAVAYQ 836
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 1 PEPPRR--TPVQ 10
P PPRR TP+Q
Sbjct: 239 PTPPRRSSTPLQ 250
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 PEPPRRTPV 9
PE PRR V
Sbjct: 906 PESPRRFMV 914
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 1 PEPPRR--TPVQ 10
P PPRR TP+Q
Sbjct: 241 PTPPRRSSTPLQ 252
>sp|E1A_ADE12|EARLY E1A protein|Human adenovirus A serotype 12
Query: 1 PEPPRRTPV 9
PEPP +PV
Sbjct: 80 PEPPVLSPV 88
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 PEPPRR 6
P+PPRR
Sbjct: 21 PQPPRR 26
4|Sequence|16|25|RTPVQPNPIV
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 RTPVQPNPIV 10
R P+ PNP++
Sbjct: 235 RVPIGPNPVI 244
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 RTPVQPNPIV 10
R P+ PNP++
Sbjct: 235 RVPIGPNPVI 244
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TPVQPNP 8
TPV PNP
Sbjct: 436 TPVAPNP 442
>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TPVQPNP 8
TP+QP+P
Sbjct: 217 TPLQPSP 223
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 2 TPVQPNP 8
TPV PNP
Sbjct: 436 TPVAPNP 442
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 RTPVQPNPIV 10
R P+ PNP++
Sbjct: 235 RVPIGPNPVI 244
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 RTPVQPNPI 9
R+P PNP+
Sbjct: 1235 RSPAWPNPV 1243
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TPVQPNP 8
TP+QP+P
Sbjct: 214 TPLQPSP 220
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 4 VQPNPIV 10
+ PNP+V
Sbjct: 103 ITPNPLV 109
>sp|ORF24_TTVV2|ORF2/4 protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 RTPVQPNP 8
+TPVQP+P
Sbjct: 197 QTPVQPSP 204
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 2 TPVQPNPIV 10
T ++P P+V
Sbjct: 94 TGIRPRPVV 102
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 RTPVQPNPI 9
+TPV P I
Sbjct: 901 KTPVNPTTI 909
>sp|TEG7_HHV2H|TEGUMENT protein UL51|Human herpesvirus 2 (strain HG52)
Query: 1 RTPVQPNPI 9
R+PV+P P+
Sbjct: 206 RSPVRPGPV 214
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 3 PVQPNP 8
PV+P P
Sbjct: 14 PVEPEP 19
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 3 PVQPNP 8
PV+P P
Sbjct: 14 PVEPEP 19
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 2 TPVQPNPIV 10
T ++P P+V
Sbjct: 94 TGIRPRPVV 102
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PVQPNPI 9
PV P P+
Sbjct: 205 PVNPEPV 211
>sp|ORF24_TTVV1|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (strain VT416)
Query: 1 RTPVQPNP 8
+TP+QP+P
Sbjct: 197 QTPLQPSP 204
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 RTPVQPNPI 9
+TPV NPI
Sbjct: 55 KTPVWLNPI 63
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 RTPVQPNP 8
R P QP P
Sbjct: 1788 RNPPQPAP 1795
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 RTPVQPNPI 9
+TPV NPI
Sbjct: 55 KTPVWLNPI 63
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 RTPVQPNP 8
R P+QP P
Sbjct: 24 RVPMQPAP 31
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 RTPVQPNP 8
R P+QP P
Sbjct: 24 RVPMQPAP 31
5|Sequence|21|30|PNPIVYMMKA
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 1 PNPIVYMMKA 10
P P+VY +A
Sbjct: 286 PEPMVYWTRA 295
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 2 NPIVYMMK 9
NPI+YM +
Sbjct: 25 NPIIYMRR 32
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 3 PIVYMM 8
PIVYM+
Sbjct: 280 PIVYMI 285
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 3 PIVYMM 8
PIVYM+
Sbjct: 280 PIVYMI 285
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 3 PIVYMM 8
PI+YM+
Sbjct: 280 PIIYML 285
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 3 PIVYMM 8
PI+YM+
Sbjct: 280 PIIYML 285
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 3 PIVYMM 8
PI+YM+
Sbjct: 280 PIIYML 285
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 3 PIVYMM 8
PI+YM+
Sbjct: 280 PIIYML 285
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 3 PIVYMM 8
PI+YM+
Sbjct: 280 PIIYML 285
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 3 PIVYMM 8
PI+YM+
Sbjct: 280 PIIYML 285
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 3 PIVYMM 8
PI+YM+
Sbjct: 280 PIIYML 285
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 3 PIVYMM 8
PI+YM+
Sbjct: 280 PIIYMI 285
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 3 PIVYMM 8
PI+YM+
Sbjct: 280 PIIYMI 285
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 3 PIVYMM 8
PI+YM+
Sbjct: 280 PIIYMV 285
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 3 PIVYMM 8
PI+YM+
Sbjct: 280 PIIYMV 285
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PNPIVYMMK 9
PN I+Y K
Sbjct: 349 PNSILYCSK 357
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 PNPIVYMMK 9
PN I+Y K
Sbjct: 349 PNSILYCSK 357
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 3 PIVYMM 8
P++YM+
Sbjct: 280 PVIYML 285
6|Sequence|26|35|YMMKAFDLIV
***** No hits found ******
7|Sequence|31|40|FDLIVDRPVT
>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain 17)
Query: 1 FDLIVDRPVT 10
FD++V RPVT
Sbjct: 221 FDIVVRRPVT 230
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LIVDRPV 9
L++DRPV
Sbjct: 183 LVLDRPV 189
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 4 IVDRPVT 10
+VDRP T
Sbjct: 652 VVDRPCT 658
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 4 IVDRPVT 10
+VDRP T
Sbjct: 652 VVDRPCT 658
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 DLIVDRPV 9
DL+ D PV
Sbjct: 710 DLVTDSPV 717
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 IVDRPVT 10
+VDRP T
Sbjct: 652 VVDRPCT 658
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 DLIVDRPV 9
DL+ D PV
Sbjct: 709 DLVTDSPV 716
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 DLIVDRPV 9
DL+ D PV
Sbjct: 710 DLVTDSPV 717
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 DLIVDRPV 9
DL+ D PV
Sbjct: 709 DLVTDSPV 716
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 DLIVDRPV 9
DL+ D PV
Sbjct: 710 DLVTDSPV 717
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 DLIVDRPV 9
DL+ D PV
Sbjct: 709 DLVTDSPV 716
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FDLIVDRPVT 10
FDL + +P+T
Sbjct: 746 FDLPLTQPIT 755
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 IVDRPVT 10
IVD P+T
Sbjct: 707 IVDNPLT 713
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 IVDRPVT 10
IVD P+T
Sbjct: 707 IVDNPLT 713
>sp|VE4_HPV6C|PROBABLE protein E4|Human papillomavirus type 6c
Query: 5 VDRPVT 10
VDRP+T
Sbjct: 65 VDRPLT 70
8|Sequence|36|45|DRPVTLVREF
>sp|ORF3_TTVB1|UNCHARACTERIZED ORF3 protein|Torque teno mini virus 1
Query: 2 RPVTLVREF 10
RPVT R+F
Sbjct: 28 RPVTSSRDF 36
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 3 PVTLVREF 10
PV+ +REF
Sbjct: 612 PVSGIREF 619
>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56
Query: 1 DRPVTLV 7
DRP TLV
Sbjct: 243 DRPATLV 249
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 1 DRPVTLVR 8
D PV LVR
Sbjct: 399 DPPVILVR 406
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DRPVTL 6
D+P+TL
Sbjct: 408 DKPITL 413
>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9
Query: 1 DRPVTLVREF 10
D+PVT+ F
Sbjct: 315 DQPVTIKTTF 324
>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9
Query: 1 DRPVTLVREF 10
D+PVT+ F
Sbjct: 315 DQPVTIKTTF 324
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 1 DRPVTLVR 8
D PV LVR
Sbjct: 413 DPPVILVR 420
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 1 DRPVTLVR 8
D PV LVR
Sbjct: 422 DPPVILVR 429
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 1 DRPVTLVR 8
D PV LVR
Sbjct: 419 DPPVILVR 426
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 1 DRPVTLVR 8
D PV LVR
Sbjct: 425 DPPVILVR 432
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 1 DRPVTLVR 8
D PV LVR
Sbjct: 418 DPPVILVR 425
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 1 DRPVTLVR 8
D PV LVR
Sbjct: 409 DPPVILVR 416
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 1 DRPVTLVR 8
D PV LVR
Sbjct: 414 DPPVILVR 421
9|Sequence|41|50|LVREFIERQH
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 LVREFIERQH 10
+V+EF E QH
Sbjct: 308 IVKEFAETQH 317
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 EFIERQH 10
+FI RQH
Sbjct: 909 DFISRQH 915
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 EFIERQH 10
+FI RQH
Sbjct: 909 DFISRQH 915
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 2 VREFIERQ 9
+REF+E++
Sbjct: 193 IREFMEKE 200
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 REFIERQ 9
REF++RQ
Sbjct: 40 REFVKRQ 46
>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 3 REFIERQ 9
REF++RQ
Sbjct: 40 REFVKRQ 46
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 LVREFIERQ 9
L +E+I+RQ
Sbjct: 414 LQKEYIDRQ 422
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LVREFIERQH 10
+V+E E QH
Sbjct: 308 IVKEIAETQH 317
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LVREFIERQH 10
+V+E E QH
Sbjct: 588 IVKEIAETQH 597
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LVREFIERQH 10
+V+E E QH
Sbjct: 588 IVKEIAETQH 597
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LVREFIERQH 10
+V+E E QH
Sbjct: 588 IVKEIAETQH 597
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 5 FIERQH 10
F+E+QH
Sbjct: 126 FVEQQH 131
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 2 VREFIERQ 9
+REF+E++
Sbjct: 236 IREFMEKE 243
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 2 VREFIERQ 9
+REF+E++
Sbjct: 236 IREFMEKE 243
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 2 VREFIERQ 9
+REF+E++
Sbjct: 236 IREFMEKE 243
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 VREFIERQ 9
+REF+E++
Sbjct: 236 IREFMEKE 243
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 2 VREFIERQ 9
+REF+E++
Sbjct: 236 IREFMEKE 243
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 LVREFIER 8
L+R+F ER
Sbjct: 643 LIRKFFER 650
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 LVREFIER 8
L+R+F ER
Sbjct: 643 LIRKFFER 650
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LVREFIERQH 10
+V+E E QH
Sbjct: 488 VVKEIAETQH 497
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LVREFIERQH 10
+V+E E QH
Sbjct: 588 VVKEIAETQH 597
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LVREFIERQH 10
+V+E E QH
Sbjct: 588 VVKEIAETQH 597
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LVREFIERQH 10
+V+E E QH
Sbjct: 357 VVKEIAETQH 366
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 LVREFIERQH 10
+V+E E QH
Sbjct: 588 VVKEIAETQH 597
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LVREFIERQH 10
+V+E E QH
Sbjct: 588 VVKEIAETQH 597
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LVREFIERQH 10
+V+E E QH
Sbjct: 588 VVKEIAETQH 597
>sp|DUT_HHV8P|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 8 type P
Query: 5 FIERQH 10
F+ER+H
Sbjct: 223 FVERRH 228
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 1 LVREFIERQ 9
L +E+I+RQ
Sbjct: 410 LNKEYIDRQ 418
10|Sequence|46|55|IERQHAKNRY
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 RQHAKNRY 10
RQH+ RY
Sbjct: 1848 RQHSNXRY 1855
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IERQHAKNRY 10
+ QH NRY
Sbjct: 95 VNPQHPANRY 104
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IERQHAKNRY 10
+ QH NRY
Sbjct: 95 VNPQHPANRY 104
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 3 RQHAKNRY 10
RQ+ +N+Y
Sbjct: 48 RQNGRNKY 55
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 3 RQHAKNRY 10
RQ+ +N+Y
Sbjct: 48 RQNGRNKY 55
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 5 HAKNR 9
HAKNR
Sbjct: 283 HAKNR 287
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 3 RQHAKNRY 10
RQ+ +N+Y
Sbjct: 48 RQNGRNKY 55
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 IERQHAKN 8
+ER+H K+
Sbjct: 1523 VEREHCKS 1530
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 1 IERQHAKNRY 10
I QH+ N Y
Sbjct: 320 INLQHSPNHY 329
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 IERQHAK 7
+ER+HA+
Sbjct: 398 LEREHAQ 404
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 IERQHAK 7
+ER+HA+
Sbjct: 398 LEREHAQ 404
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 IERQHAK 7
+ER+HA+
Sbjct: 398 LEREHAQ 404
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 IERQHAK 7
+ER+HA+
Sbjct: 398 LEREHAQ 404
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 IERQHAKNRY 10
I+R H KN++
Sbjct: 1653 IDRIHIKNKH 1662
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 IERQHAKNRY 10
I+R H KN++
Sbjct: 1653 IDRIHIKNKH 1662
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 1 IERQHAKNRY 10
+ERQ A N Y
Sbjct: 357 VERQTADNLY 366
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 IERQHAKNRY 10
+ER H K Y
Sbjct: 1495 VERGHYKTYY 1504
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 2 ERQHAKNRY 10
E QH+ N+Y
Sbjct: 499 EFQHSMNQY 507
11|Sequence|51|60|AKNRYYYYHR
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 AKNRYYYYHR 10
A RYYY R
Sbjct: 2799 AGQRYYYLTR 2808
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 AKNRYYYYH 9
A+ R++Y+H
Sbjct: 238 ARRRHFYFH 246
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 AKNRYYYYHR 10
A RYYY R
Sbjct: 2809 AGKRYYYLTR 2818
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 AKNRYYYYHR 10
A RYYY R
Sbjct: 2805 AGKRYYYLTR 2814
>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)
Query: 2 KNRYYYY 8
+NR YYY
Sbjct: 123 QNRLYYY 129
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 NRYYYY 8
NRY YY
Sbjct: 2915 NRYKYY 2920
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 3 NRYYYYHR 10
NR YY R
Sbjct: 415 NRLLYYQR 422
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 3 NRYYYYHR 10
NR YY R
Sbjct: 415 NRLLYYQR 422
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 RYYYYHR 10
RYYY R
Sbjct: 2804 RYYYLTR 2810
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 RYYYYHR 10
RYYY R
Sbjct: 2805 RYYYLTR 2811
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 RYYYYHR 10
RYYY R
Sbjct: 2808 RYYYLTR 2814
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 RYYYYHR 10
RYYY R
Sbjct: 2810 RYYYLTR 2816
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 RYYYYHR 10
RYYY R
Sbjct: 2810 RYYYLTR 2816
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 4 RYYYYHR 10
RYYY R
Sbjct: 2811 RYYYLTR 2817
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 RYYYYHR 10
RYYY R
Sbjct: 2808 RYYYLTR 2814
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 3 NRYYYYHR 10
NR YY R
Sbjct: 415 NRLLYYQR 422
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 3 NRYYYYHR 10
NR YY R
Sbjct: 415 NRLLYYQR 422
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 3 NRYYYYHR 10
NR YY R
Sbjct: 415 NRLLYYQR 422
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KNRYYYY 8
KNR +YY
Sbjct: 150 KNRNFYY 156
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 NRYYYY 8
NRY YY
Sbjct: 2915 NRYKYY 2920
>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KNRYYYY 8
KNR +YY
Sbjct: 150 KNRNFYY 156
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 3 NRYYYYHR 10
N YYY R
Sbjct: 403 NNLYYYQR 410
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 3 NRYYYYHR 10
N YYY R
Sbjct: 403 NNLYYYQR 410
>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 RYYYYHR 10
RY ++HR
Sbjct: 293 RYKFFHR 299
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 KNRYY 6
KNRYY
Sbjct: 921 KNRYY 925
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 KNRYY 6
KNRYY
Sbjct: 917 KNRYY 921
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 KNRYY 6
KNRYY
Sbjct: 921 KNRYY 925
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 2 KNRYYYY 8
+NR+Y+Y
Sbjct: 126 QNRFYFY 132
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 2 KNRYYYY 8
+NR+Y+Y
Sbjct: 126 QNRFYFY 132
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 KNRYYYYH 9
KNR +Y H
Sbjct: 828 KNRGFYKH 835
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 4 RYYYYHR 10
RY ++HR
Sbjct: 293 RYKFFHR 299
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 AKNRYYYY 8
+N YY+Y
Sbjct: 162 GQNMYYHY 169
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 AKNRYYYY 8
A NR+Y Y
Sbjct: 778 AVNRHYIY 785
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 AKNRYYYY 8
A NR+Y Y
Sbjct: 780 AVNRHYIY 787
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 AKNRYYYY 8
A NR+Y Y
Sbjct: 773 AVNRHYIY 780
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 AKNRYYYY 8
+N YY+Y
Sbjct: 162 GQNMYYHY 169
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 AKNRYYYY 8
+N YY+Y
Sbjct: 162 GQNMYYHY 169
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 AKNRYYYY 8
+N YY+Y
Sbjct: 162 GQNMYYHY 169
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 AKNRYYYY 8
+N YY+Y
Sbjct: 162 GQNMYYHY 169
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 NRYYYY 8
N+Y YY
Sbjct: 808 NKYSYY 813
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 NRYYYY 8
N+Y YY
Sbjct: 808 NKYSYY 813
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 NRYYYY 8
N+Y YY
Sbjct: 808 NKYSYY 813
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 NRYYYY 8
N+Y YY
Sbjct: 808 NKYSYY 813
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 NRYYYY 8
N+Y YY
Sbjct: 808 NKYSYY 813
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 3 NRYYYY 8
N+Y YY
Sbjct: 808 NKYSYY 813
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 NRYYYY 8
N+Y YY
Sbjct: 808 NKYSYY 813
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 AKNRYYYY 8
A ++YYY
Sbjct: 1368 ASPKWYYY 1375
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 NRYYYYH 9
NR+YY H
Sbjct: 36 NRWYYRH 42
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 NRYYYY 8
N+Y YY
Sbjct: 2889 NKYKYY 2894
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 AKNRYYYY 8
+N YY+Y
Sbjct: 162 GQNMYYHY 169
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 AKNRYYYY 8
+N YY+Y
Sbjct: 162 GQNMYYHY 169
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 AKNRYYYY 8
+N YY+Y
Sbjct: 162 GQNMYYHY 169
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 AKNRYYYY 8
+N YY+Y
Sbjct: 162 GQNMYYHY 169
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 AKNRYYYY 8
+N YY+Y
Sbjct: 162 GQNMYYHY 169
>sp|RP18_VARV|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus
Query: 5 YYYYH 9
Y YYH
Sbjct: 76 YAYYH 80
>sp|RP18_VAR67|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus (isolate
Query: 5 YYYYH 9
Y YYH
Sbjct: 76 YAYYH 80
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 NRYYYY 8
N+Y YY
Sbjct: 3282 NKYRYY 3287
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 NRYYYY 8
N+Y YY
Sbjct: 3252 NKYRYY 3257
12|Sequence|56|65|YYYHRQYRRV
>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 2 YYHRQYRRV 10
YY R RRV
Sbjct: 87 YYRRATRRV 95
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 YYHRQYRR 9
YY R YR+
Sbjct: 917 YYSRYYRK 924
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 YYHRQYRRV 10
YY ++RRV
Sbjct: 3039 YYFMKFRRV 3047
>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 2 YYHRQYRRV 10
YY R RR+
Sbjct: 86 YYRRATRRI 94
>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin)
Query: 4 HRQYRRV 10
HR+YR V
Sbjct: 34 HREYRAV 40
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169)
Query: 4 HRQYRRV 10
HR+YR V
Sbjct: 34 HREYRAV 40
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 2 YYHRQYRR 9
Y H++YR+
Sbjct: 506 YDHKKYRK 513
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 2 YYHRQYRR 9
Y H++YR+
Sbjct: 506 YDHKKYRK 513
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 2 YYHRQYRR 9
Y H++YR+
Sbjct: 506 YDHKKYRK 513
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 2 YYHRQYRR 9
Y H++YR+
Sbjct: 506 YDHKKYRK 513
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 2 YYHRQYRR 9
Y H++YR+
Sbjct: 506 YDHKKYRK 513
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 2 YYHRQYRR 9
Y H++YR+
Sbjct: 506 YDHKKYRK 513
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 2 YYHRQYRR 9
Y H++YR+
Sbjct: 506 YDHKKYRK 513
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 2 YYHRQYRR 9
Y H++YR+
Sbjct: 506 YDHKKYRK 513
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 2 YYHRQYRR 9
Y H++YR+
Sbjct: 506 YDHKKYRK 513
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 2 YYHRQYRR 9
Y H++YR+
Sbjct: 506 YDHKKYRK 513
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 YYHRQYRRV 10
YY ++RRV
Sbjct: 3039 YYFMKFRRV 3047
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YHRQYRRV 10
+ R+YRR+
Sbjct: 253 WQRRYRRI 260
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 4 HRQYRRV 10
H QY+R+
Sbjct: 197 HEQYKRI 203
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 YYYHRQ 6
+YYHR
Sbjct: 677 HYYHRH 682
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 YYYHRQ 6
+YYHR
Sbjct: 686 HYYHRH 691
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 YYYHRQ 6
+YYHR
Sbjct: 686 HYYHRH 691
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 YYYHRQYRR 9
+Y+H Q+ R
Sbjct: 1192 FYFHTQHVR 1200
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 YYYHRQYRR 9
+Y+H Q+ R
Sbjct: 1192 FYFHTQHVR 1200
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 YYYHRQ 6
+YYHR
Sbjct: 686 HYYHRH 691
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 YYHRQYR 8
Y H QYR
Sbjct: 496 YDHTQYR 502
>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)
Query: 1 YYYHRQYR 8
Y YHRQ R
Sbjct: 362 YVYHRQKR 369
>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 YYYHRQYR 8
Y YHRQ R
Sbjct: 362 YVYHRQKR 369
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 YYHRQYR 8
YY+R+Y+
Sbjct: 9 YYNRRYQ 15
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 YYYHR 5
+YYHR
Sbjct: 692 HYYHR 696
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 YHRQYRRV 10
+ R+YRR+
Sbjct: 253 WQRRYRRI 260
>sp|M1_I56A3|MATRIX protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 4 HRQYRRV 10
HR YR++
Sbjct: 159 HRSYRQM 165
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 YYHRQYR 8
YY+R+Y+
Sbjct: 9 YYNRRYQ 15
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 YYYHR 5
+YYHR
Sbjct: 692 HYYHR 696
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 YYYHR 5
+YYHR
Sbjct: 692 HYYHR 696
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 YYYHR 5
+YYHR
Sbjct: 692 HYYHR 696
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 YYHRQYR 8
YY+R+Y+
Sbjct: 9 YYNRRYQ 15
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 YYYHR 5
+YYHR
Sbjct: 691 HYYHR 695
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 YYYHRQYR 8
Y +RQYR
Sbjct: 598 YQSYRQYR 605
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 YYYHRQYR 8
Y +RQYR
Sbjct: 598 YQSYRQYR 605
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 YYYHR 5
+YYHR
Sbjct: 691 HYYHR 695
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 1 YYYHRQYR 8
Y +RQYR
Sbjct: 597 YQSYRQYR 604
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 1 YYYHRQYR 8
Y +RQYR
Sbjct: 597 YQSYRQYR 604
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 HRQYR 8
HR+YR
Sbjct: 341 HREYR 345
>sp|UL56_HHV1E|PROTEIN UL56|Human herpesvirus 1 (strain HFEM)
Query: 2 YYHRQYRR 9
Y H YRR
Sbjct: 197 YDHAPYRR 204
13|Sequence|61|70|QYRRVPDITE
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 RVPDITE 10
+VPDITE
Sbjct: 2527 KVPDITE 2533
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 3 RRVPDIT 9
RRVPD T
Sbjct: 294 RRVPDTT 300
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 3 RRVPDIT 9
RRVPD T
Sbjct: 294 RRVPDTT 300
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 YRRVPDITE 10
YRR+P++ +
Sbjct: 318 YRRIPNLPD 326
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 YRRVPDITE 10
YRR+P++ +
Sbjct: 318 YRRIPNLPD 326
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 YRRVPD 7
YRR PD
Sbjct: 998 YRRTPD 1003
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 YRRVPD 7
YRR PD
Sbjct: 998 YRRTPD 1003
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 YRRVPD 7
YRR PD
Sbjct: 998 YRRTPD 1003
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 YRRVPDITE 10
+RR+PD+ +
Sbjct: 318 HRRIPDLPD 326
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 3 RRVPDITE 10
RRVP IT+
Sbjct: 277 RRVPGITD 284
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 3 RRVPDITE 10
RRVP IT+
Sbjct: 277 RRVPGITD 284
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 YRRVPD 7
YRR PD
Sbjct: 932 YRRTPD 937
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 3 RRVPDITE 10
R +PD+TE
Sbjct: 335 RFIPDLTE 342
>sp|TEG6_HHV1E|TEGUMENT protein UL55|Human herpesvirus 1 (strain HFEM)
Query: 2 YRRVPDIT 9
+ R PDIT
Sbjct: 10 FLRAPDIT 17
>sp|TEG6_HHV2H|TEGUMENT protein UL55|Human herpesvirus 2 (strain HG52)
Query: 2 YRRVPDIT 9
+ R PDIT
Sbjct: 10 FLRAPDIT 17
>sp|TEG6_HHV11|TEGUMENT protein UL55|Human herpesvirus 1 (strain 17)
Query: 2 YRRVPDIT 9
+ R PDIT
Sbjct: 10 FLRAPDIT 17
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 YRRVPDIT 9
+RR PD T
Sbjct: 586 FRRHPDAT 593
>sp|ORF2_ZIKVF|UORF2 protein|Zika virus (isolate ZIKV/Human/French
Query: 1 QYRRVPD 7
+ RR+PD
Sbjct: 16 EIRRIPD 22
>sp|ORF2_ZIKVK|UORF2 protein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 QYRRVPD 7
+ RR+PD
Sbjct: 16 EIRRIPD 22
14|Sequence|66|75|PDITECKEED
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PDITECKEE 9
PD +EC E
Sbjct: 912 PDTSECPNE 920
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PDITECKEE 9
PD +EC E
Sbjct: 912 PDTSECPNE 920
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PDITECKEE 9
PD +EC E
Sbjct: 912 PDTSECPNE 920
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PDITECKEE 9
PD +EC E
Sbjct: 912 PDTSECPNE 920
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PDITECKEE 9
PD +EC E
Sbjct: 912 PDTSECPNE 920
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PDITECKEE 9
PD EC +E
Sbjct: 913 PDTPECPDE 921
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 DITECKEED 10
++TEC++ D
Sbjct: 412 NLTECRQPD 420
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 PDITECKEED 10
P+ ++C EE+
Sbjct: 1402 PNFSKCSEEE 1411
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 PDITECKEE 9
PD +C +E
Sbjct: 4359 PDCVDCHDE 4367
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 ITECKEE 9
ITECKE
Sbjct: 484 ITECKEH 490
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 DITEC 6
DITEC
Sbjct: 481 DITEC 485
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PDITECKEE 9
PD EC ++
Sbjct: 912 PDTPECPDD 920
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PDITECKEE 9
PD +C EE
Sbjct: 337 PDAFKCIEE 345
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PDITECKEE 9
PD +C EE
Sbjct: 337 PDAFKCIEE 345
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PDITECKEE 9
PD +C EE
Sbjct: 337 PDAFKCIEE 345
>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)
Query: 3 ITECKEED 10
IT+C E D
Sbjct: 2 ITDCFEAD 9
15|Sequence|71|80|CKEEDIMCMY
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 CKEEDIMCMY 10
C EED +C Y
Sbjct: 380 CAEEDALCAY 389
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 CKEEDIMCMY 10
C EED +C Y
Sbjct: 380 CAEEDALCAY 389
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 CKEEDIMCMY 10
C EED +C Y
Sbjct: 380 CAEEDALCAY 389
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 CKEEDIMCMY 10
C EED +C Y
Sbjct: 380 CAEEDALCAY 389
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 CKEEDIMCMY 10
C EED +C Y
Sbjct: 380 CAEEDALCAY 389
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 CKEEDIMCMY 10
C EED +C Y
Sbjct: 380 CAEEDALCAY 389
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 CKEEDIMCMY 10
C EED +C Y
Sbjct: 380 CAEEDALCAY 389
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 CKEEDIMCMY 10
C EED +C Y
Sbjct: 380 CAEEDALCAY 389
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 CKEEDIMCMY 10
C EED +C Y
Sbjct: 380 CAEEDALCAY 389
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 CKEEDIMCMY 10
C+++++ C+Y
Sbjct: 319 CRDQELCCVY 328
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 1 CKEEDIMCMY 10
C+++++ C+Y
Sbjct: 319 CRDQELCCVY 328
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 KEEDIMCMY 10
K+E+ MC Y
Sbjct: 778 KKEETMCSY 786
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 KEEDIMCMY 10
K+E+ MC Y
Sbjct: 778 KKEETMCSY 786
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 KEEDIMCMY 10
K+E+ MC Y
Sbjct: 778 KKEETMCSY 786
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 KEEDIMCMY 10
K+E+ MC Y
Sbjct: 778 KKEETMCSY 786
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 KEEDIMCMY 10
K+E+ MC Y
Sbjct: 778 KKEETMCSY 786
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 KEEDIMCMY 10
K+E+ MC Y
Sbjct: 778 KKEETMCSY 786
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 KEEDIMCMY 10
K+E+ MC Y
Sbjct: 778 KKEETMCSY 786
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 KEEDIMCMY 10
K+E+ MC Y
Sbjct: 778 KKEETMCSY 786
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 KEEDIMCMY 10
K+E+ MC Y
Sbjct: 779 KKEETMCSY 787
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 KEEDIMCMY 10
K+E+ MC Y
Sbjct: 778 KKEETMCSY 786
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 KEEDIMCMY 10
K+E+ MC Y
Sbjct: 778 KKEETMCSY 786
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 KEEDIMCMY 10
K+E+ MC Y
Sbjct: 779 KKEETMCSY 787
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 1 CKEEDI 6
C EEDI
Sbjct: 26 CTEEDI 31
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 3 EEDIMCMY 10
EED +C++
Sbjct: 939 EEDDLCLH 946
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 3 EEDIMCM 9
EEDI C+
Sbjct: 2 EEDIACV 8
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 4 EDIMCMY 10
ED++C Y
Sbjct: 99 EDMLCAY 105
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 KEEDIMC 8
K EDI C
Sbjct: 3374 KREDIWC 3380
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 KEEDIMC 8
K EDI C
Sbjct: 3371 KREDIWC 3377
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 KEEDIMC 8
K EDI C
Sbjct: 3375 KREDIWC 3381
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 KEEDIMC 8
K EDI C
Sbjct: 3370 KREDIWC 3376
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 KEEDIMC 8
K EDI C
Sbjct: 3375 KREDIWC 3381
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 KEEDIMC 8
K EDI C
Sbjct: 3374 KREDIWC 3380
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 KEEDIMC 8
K EDI C
Sbjct: 3373 KREDIWC 3379
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 KEEDIMC 8
K EDI C
Sbjct: 3373 KREDIWC 3379
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 KEEDIMC 8
K EDI C
Sbjct: 3373 KREDIWC 3379
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 KEEDIMC 8
K EDI C
Sbjct: 3373 KREDIWC 3379
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 EEDIMCM 9
EEDI C+
Sbjct: 2 EEDIACV 8
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 1 CKEEDIMC 8
KEE I+C
Sbjct: 244 AKEEQILC 251
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 KEEDIMC 8
+E+D++C
Sbjct: 2421 EEDDVVC 2427
16|Sequence|76|85|IMCMYEAEMQ
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 MCMYEAE 8
MCMY E
Sbjct: 969 MCMYAVE 975
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 MCMYEAE 8
MCMY E
Sbjct: 969 MCMYAVE 975
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 IMCMYEAEM 9
++C+ EAEM
Sbjct: 193 VVCVPEAEM 201
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 3 CMYEAEM 9
CMYE M
Sbjct: 199 CMYERNM 205
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 3 CMYEAE 8
C YEAE
Sbjct: 380 CNYEAE 385
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 CMYEAEM 9
C Y+AE+
Sbjct: 1190 CTYKAEL 1196
17|Sequence|81|90|EAEMQWKRDY
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 MQWKRDY 10
+QW RDY
Sbjct: 629 LQWARDY 635
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 5 QWKRDY 10
QW+RDY
Sbjct: 171 QWRRDY 176
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 AEMQWKRD 9
A +QW RD
Sbjct: 91 ARIQWNRD 98
>sp|Y190_ADE07|UNCHARACTERIZED 19.0 kDa early protein|Human adenovirus B serotype 7
Query: 5 QWKRD 9
QW+RD
Sbjct: 99 QWRRD 103
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 EMQWKRD 9
EMQ+ RD
Sbjct: 263 EMQYNRD 269
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 EMQWKRD 9
EMQ+ RD
Sbjct: 264 EMQYNRD 270
>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United
Query: 2 AEMQ----WKRDY 10
AEM+ WKR Y
Sbjct: 216 AEMKRNYDWKRSY 228
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 3 EMQWKRD 9
EMQ+ RD
Sbjct: 263 EMQYNRD 269
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 EMQWKRD 9
EMQ+ RD
Sbjct: 264 EMQYNRD 270
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 EMQWKRD 9
EMQ+ RD
Sbjct: 263 EMQYNRD 269
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EAEMQWK 7
+AE++WK
Sbjct: 6245 QAEVEWK 6251
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 QWKRD 9
QWK+D
Sbjct: 1054 QWKKD 1058
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 QWKRD 9
QWK+D
Sbjct: 1055 QWKKD 1059
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 QWKRD 9
QWK+D
Sbjct: 1054 QWKKD 1058
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 QWKRD 9
QWK+D
Sbjct: 1054 QWKKD 1058
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 QWKRD 9
QWK+D
Sbjct: 1054 QWKKD 1058
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 QWKRD 9
QWK+D
Sbjct: 1055 QWKKD 1059
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 EMQWKRD 9
EMQ+ RD
Sbjct: 264 EMQYNRD 270
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 EMQWKRD 9
EMQ+ RD
Sbjct: 263 EMQYNRD 269
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 EMQWKRD 9
EMQ+ RD
Sbjct: 264 EMQYNRD 270
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 EMQWKRD 9
EMQ+ RD
Sbjct: 263 EMQYNRD 269
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 EMQWKRD 9
EMQ+ RD
Sbjct: 264 EMQYNRD 270
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 EMQWKRD 9
EMQ+ RD
Sbjct: 263 EMQYNRD 269
>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 AEMQWKRDY 10
A QW+RD+
Sbjct: 168 ARKQWRRDH 176
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 AEMQWKRDY 10
A QW+RD+
Sbjct: 168 ARKQWRRDH 176
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 EMQWKRD 9
EMQ+ RD
Sbjct: 263 EMQYNRD 269
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 EAEMQWKR 8
+ E+QW R
Sbjct: 1745 QGEIQWMR 1752
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 EMQWKRD 9
EMQ+ RD
Sbjct: 264 EMQYNRD 270
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 EMQWKRD 9
EMQ+ RD
Sbjct: 263 EMQYNRD 269
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 EAEMQWKR 8
+ E+QW R
Sbjct: 1746 QGEIQWMR 1753
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 EAEMQWKR 8
+ E+QW R
Sbjct: 1748 QGEIQWMR 1755
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 EAEMQWKR 8
+ E+QW R
Sbjct: 1746 QGEIQWMR 1753
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 EAEMQWKR 8
+ E+QW R
Sbjct: 1748 QGEIQWMR 1755
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 EAEMQWKR 8
+ E+QW R
Sbjct: 1745 QGEIQWMR 1752
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 EAEMQWKR 8
+ E+QW R
Sbjct: 1753 QGEIQWMR 1760
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 EAEMQWKR 8
+ E+QW R
Sbjct: 1745 QGEIQWMR 1752
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 2 AEMQWKRD 9
AE++W+ D
Sbjct: 592 AELKWRYD 599
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 4 MQWKRD 9
++WKRD
Sbjct: 1795 VKWKRD 1800
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 5 QWKRDY 10
QW+R+Y
Sbjct: 171 QWRRNY 176
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 5 QWKRDY 10
QW+R+Y
Sbjct: 171 QWRRNY 176
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 5 QWKRDY 10
+WK DY
Sbjct: 816 KWKSDY 821
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 EAEMQWKRDY 10
+A +W R+Y
Sbjct: 387 QAFSRWAREY 396
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 EAEMQWKRDY 10
+A +W R+Y
Sbjct: 387 QAFSRWAREY 396
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 1 EAEMQWKR 8
+AE W+R
Sbjct: 673 DAEQYWRR 680
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 AEMQWKRDY 10
A QW+RD+
Sbjct: 168 ARKQWRRDH 176
18|Sequence|86|95|WKRDYKVDQE
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 WKRDYKVDQE 10
W ++Y++DQE
Sbjct: 394 WAKEYRLDQE 403
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 WKRDYKVDQE 10
W ++YK DQE
Sbjct: 394 WAKEYKEDQE 403
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 WKRDYKVDQE 10
W ++YK DQE
Sbjct: 394 WAKEYKEDQE 403
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 WKRDYKVDQE 10
W ++YK DQE
Sbjct: 394 WAKEYKEDQE 403
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 WKRDYKVDQE 10
W ++YK DQE
Sbjct: 394 WAKEYKEDQE 403
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 WKRDYKVDQE 10
W R+Y+ D E
Sbjct: 392 WAREYRADLE 401
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 WKRDYKVD 8
W R+YK D
Sbjct: 395 WAREYKAD 402
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 WKRDYKVD 8
WKRD KV+
Sbjct: 315 WKRDVKVE 322
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 WKRDYKVD 8
WKRD KV+
Sbjct: 315 WKRDVKVE 322
>sp|US11_HCMVT|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 1 WKRDYKVDQ 9
W RDY+V Q
Sbjct: 112 WLRDYRVPQ 120
>sp|US11_HCMVM|MEMBRANE glycoprotein US11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WKRDYKVDQ 9
W RDY+V Q
Sbjct: 112 WLRDYRVPQ 120
>sp|US11_HCMVA|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 WKRDYKVDQ 9
W RDY+V Q
Sbjct: 112 WLRDYRVPQ 120
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 2 KRDYKVDQ 9
K DY VDQ
Sbjct: 336 KSDYAVDQ 343
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 2 KRDYKVDQ 9
K DY VDQ
Sbjct: 324 KSDYAVDQ 331
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 2 KRDYKVDQ 9
K DY VDQ
Sbjct: 324 KSDYAVDQ 331
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 2 KRDYKVDQ 9
K DY VDQ
Sbjct: 323 KSDYAVDQ 330
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 2 KRDYKVDQ 9
K DY VDQ
Sbjct: 323 KSDYAVDQ 330
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 2 KRDYKVDQ 9
K DY VDQ
Sbjct: 323 KSDYAVDQ 330
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 KRDYKVDQ 9
K DY VDQ
Sbjct: 323 KSDYAVDQ 330
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 2 KRDYKVDQ 9
K DY VDQ
Sbjct: 324 KSDYAVDQ 331
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 2 KRDYKVDQ 9
K DY VDQ
Sbjct: 324 KSDYAVDQ 331
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 2 KRDYKVDQ 9
K DY VDQ
Sbjct: 324 KSDYAVDQ 331
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 1 WKRDYKVD 8
W R YK+D
Sbjct: 441 WTRYYKMD 448
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 WKRDYK 6
WK DYK
Sbjct: 817 WKSDYK 822
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 WKRDYKVDQE 10
W R+ K D E
Sbjct: 392 WAREAKADME 401
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 WKRDY 5
W RDY
Sbjct: 631 WARDY 635
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 WKRDYKVDQE 10
W R+ + D E
Sbjct: 393 WAREARADME 402
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 WKRDYKVDQE 10
W R+ + D E
Sbjct: 393 WAREARADME 402
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 4 DYKVDQ 9
DY VDQ
Sbjct: 332 DYAVDQ 337
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 4 DYKVDQ 9
DY VDQ
Sbjct: 339 DYAVDQ 344
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 5 YKVDQE 10
YKVD+E
Sbjct: 639 YKVDEE 644
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 WKRDYK 6
W+RDY+
Sbjct: 172 WRRDYR 177
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 5 YKVDQE 10
+KVDQE
Sbjct: 1189 HKVDQE 1194
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 1 WKRDYKV 7
W R YK+
Sbjct: 441 WTRYYKI 447
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KEDYTLDEE 166
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KSDYTLDEE 166
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KSDYTLDEE 166
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KTDYTLDEE 166
>sp|PAX_I85A3|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PAX_I02A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KEDYTLDEE 166
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PAX_I67A2|PROTEIN PA-X|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 158 KADYTLDEE 166
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 KRDYKVDQE 10
K DY +D+E
Sbjct: 151 KADYTLDEE 159
19|Sequence|91|100|KVDQEIINIM
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 VDQEIINI 9
VDQ I+N+
Sbjct: 2090 VDQSILNV 2097
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 DQEIINIM 10
+QEI+N M
Sbjct: 3057 EQEILNYM 3064
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 DQEIINIM 10
+QEI+N M
Sbjct: 3057 EQEILNYM 3064
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 DQEIINIM 10
+QEI+N M
Sbjct: 3057 EQEILNYM 3064
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 DQEIINIM 10
+QEI+N M
Sbjct: 3057 EQEILNYM 3064
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 DQEIINIM 10
+QEI+N M
Sbjct: 3057 EQEILNYM 3064
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 DQEIINIM 10
+QEI+N M
Sbjct: 3057 EQEILNYM 3064
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 VDQEIINI 9
+DQ I+N+
Sbjct: 2090 IDQSILNV 2097
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 3 DQEIINIM 10
DQ I+N++
Sbjct: 189 DQSIVNVI 196
>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VDQEIINIM 10
VD EI+N++
Sbjct: 304 VDMEIVNLL 312
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 2 VDQEIINIM 10
VD+++INI+
Sbjct: 509 VDEDLINII 517
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 2 VDQEIINIM 10
VD EI+N++
Sbjct: 294 VDMEIVNLL 302
>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 KVDQEIINIM 10
+ +QE+ N+M
Sbjct: 547 RTNQEVKNVM 556
20|Sequence|96|105|IINIMQDRLK
>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 IINIMQD 7
I+N+MQD
Sbjct: 240 IVNLMQD 246
>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)
Query: 1 IINIMQDRL 9
I N+MQ+RL
Sbjct: 118 ISNVMQNRL 126
>sp|NEC1_HHV6U|NUCLEAR egress protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 NIMQDRL 9
N+MQ+RL
Sbjct: 123 NVMQNRL 129
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 4 IMQDRLK 10
IM+DRL+
Sbjct: 1567 IMRDRLR 1573
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 IINIMQDR 8
+IN+MQ R
Sbjct: 46 LINLMQPR 53
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 IINIMQDR 8
+IN+MQ R
Sbjct: 46 LINLMQPR 53
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 IINIMQDR 8
+IN+MQ R
Sbjct: 46 LINLMQPR 53
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 IINIMQDR 8
+IN+MQ R
Sbjct: 46 LINLMQPR 53
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 IINIMQDR 8
+IN+MQ R
Sbjct: 46 LINLMQPR 53
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 IINIMQDR 8
+IN+MQ R
Sbjct: 46 LINLMQPR 53
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 IINIMQDR 8
+IN+MQ R
Sbjct: 46 LINLMQPR 53
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 IINIMQDR 8
+IN+MQ R
Sbjct: 46 LINLMQPR 53
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 4 IMQDRLK 10
IM+DRL+
Sbjct: 1568 IMRDRLR 1574
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 4 IMQDRLK 10
IM+DRL+
Sbjct: 1567 IMRDRLR 1573
>sp|A57_VACCC|GUANYLATE kinase homolog|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IINIMQDRLK 10
+I I+QDR++
Sbjct: 136 LIQILQDRIR 145
>sp|UL20_HHV2H|PROTEIN UL20|Human herpesvirus 2 (strain HG52)
Query: 2 INIMQDRL 9
+NI +DRL
Sbjct: 118 VNIKRDRL 125
>sp|UL20_HHV11|PROTEIN UL20|Human herpesvirus 1 (strain 17)
Query: 2 INIMQDRL 9
+NI +DRL
Sbjct: 118 VNIKRDRL 125
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 1 IINIMQDRL 9
+ N+MQ+R
Sbjct: 121 VTNVMQNRF 129
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 1 IINIMQDRL 9
+ N+MQ+R
Sbjct: 121 VTNVMQNRF 129
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 2 INIMQDRL 9
+N++QD++
Sbjct: 13 LNVLQDKI 20
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 3 NIMQDRL 9
N++QD+L
Sbjct: 9 NVLQDQL 15
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 3 NIMQDRL 9
N++QD+L
Sbjct: 9 NVLQDQL 15
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 3 NIMQDRL 9
N++QD+L
Sbjct: 9 NVLQDQL 15
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 3 NIMQDRL 9
N++QD+L
Sbjct: 9 NVLQDQL 15
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 3 NIMQDRL 9
N++QD+L
Sbjct: 9 NVLQDQL 15
>sp|VU84_HHV6Z|PROTEIN U84|Human herpesvirus 6B (strain Z29)
Query: 1 IINIMQDRL 9
+IN MQ++L
Sbjct: 203 LINAMQEKL 211
21|Sequence|101|110|QDRLKACQQR
>sp|VE2_HPV61|REGULATORY protein E2|Human papillomavirus type 61
Query: 2 DRLKACQQR 10
DRL ACQ++
Sbjct: 8 DRLDACQEK 16
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 QDRLKACQQR 10
Q+R+KA Q++
Sbjct: 2790 QERIKALQEQ 2799
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 2 DRLKACQQR 10
D LKA +QR
Sbjct: 55 DTLKAFEQR 63
>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DRLKAC 7
+RLKAC
Sbjct: 180 ERLKAC 185
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 2 DRLKAC 7
DRLK C
Sbjct: 999 DRLKNC 1004
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 DRLKAC 7
DRLK C
Sbjct: 999 DRLKNC 1004
22|Sequence|106|115|ACQQREGQNY
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 5 REGQNY 10
REGQ+Y
Sbjct: 757 REGQSY 762
>sp|YHR1_HCMVA|UNCHARACTERIZED protein HHRF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QQREGQN 9
Q+R+GQN
Sbjct: 2 QRRQGQN 8
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 5 REGQNY 10
REGQ+Y
Sbjct: 757 REGQSY 762
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 CQQREGQ 8
C +REG+
Sbjct: 1798 CDEREGK 1804
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 CQQREGQ 8
C +REG+
Sbjct: 1797 CDEREGK 1803
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 CQQREGQ 8
C +REG+
Sbjct: 1797 CDEREGK 1803
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 ACQQREGQN 9
AC Q EG +
Sbjct: 1236 ACAQPEGDH 1244
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 CQQREG 7
C +REG
Sbjct: 1747 CDEREG 1752
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 CQQREG 7
C +REG
Sbjct: 1747 CDEREG 1752
23|Sequence|111|120|EGQNYQQNCI
>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 EGQNYQQ 7
EGQ YQQ
Sbjct: 56 EGQRYQQ 62
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 EGQNYQQ 7
EGQ YQQ
Sbjct: 56 EGQRYQQ 62
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 EGQNYQQ 7
EGQ YQQ
Sbjct: 56 EGQRYQQ 62
>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 EGQNYQQ 7
EGQ YQQ
Sbjct: 56 EGQQYQQ 62
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 GQNYQQNCI 10
GQ+Y +C+
Sbjct: 4354 GQDYHPDCV 4362
Query: 2 GQNYQQNCI 10
G+N + NC+
Sbjct: 4112 GKNLKSNCV 4120
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 1 EGQNYQQ 7
EGQNY +
Sbjct: 133 EGQNYTE 139
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 1 EGQNYQQ 7
EGQNY +
Sbjct: 133 EGQNYTE 139
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 1 EGQNYQQ 7
EGQNY +
Sbjct: 138 EGQNYTE 144
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 EGQNYQQ 7
EGQNY +
Sbjct: 138 EGQNYTE 144
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 EGQNYQQ 7
EGQNY +
Sbjct: 137 EGQNYTE 143
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 EGQNYQQ 7
EGQNY +
Sbjct: 138 EGQNYTE 144
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 GQNYQQNCI 10
G+ Y Q+C+
Sbjct: 1481 GKRYTQSCL 1489
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 QNYQQNCI 10
Q Y NCI
Sbjct: 4661 QTYHPNCI 4668
>sp|NEF_HV2BE|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 EGQNYQQ 7
EGQ YQQ
Sbjct: 56 EGQQYQQ 62
>sp|NEF_HV2NZ|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 EGQNYQQ 7
EGQ YQQ
Sbjct: 56 EGQRYQQ 62
>sp|NEF_HV2ST|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 EGQNYQQ 7
EG+ YQQ
Sbjct: 56 EGRRYQQ 62
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 QNYQQNCI 10
Q Y NC+
Sbjct: 4670 QTYHANCV 4677
>sp|VP2_NVN68|MINOR capsid protein VP2|Norovirus (strain Human/NoV/United
Query: 1 EGQNYQQN 8
+ Q YQQN
Sbjct: 31 QSQRYQQN 38
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 EGQNYQQNC 9
+GQ YQ+ C
Sbjct: 685 DGQMYQKCC 693
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 1 EGQNYQQNCI 10
EG+ NCI
Sbjct: 111 EGEELYNNCI 120
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 1 EGQNYQQNCI 10
EG+ NCI
Sbjct: 111 EGEELYNNCI 120
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EGQNYQQNCI 10
EG+ NCI
Sbjct: 111 EGEELYNNCI 120
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 1 EGQNYQQNCI 10
EG+ NCI
Sbjct: 111 EGEELYNNCI 120
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 EGQNYQQNCI 10
EG+ NCI
Sbjct: 111 EGEELYNNCI 120
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 1 EGQNYQQNCI 10
EG+ NCI
Sbjct: 111 EGEELYNNCI 120
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 EGQNYQQ 7
EG+ YQQ
Sbjct: 56 EGRQYQQ 62
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 QNYQQNCI 10
Q Y NC+
Sbjct: 4684 QTYHPNCV 4691
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 EGQNYQQ 7
EG NY Q
Sbjct: 348 EGTNYAQ 354
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 EGQNYQQ 7
EG NY Q
Sbjct: 348 EGTNYAQ 354
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 EGQNYQQ 7
EG NY Q
Sbjct: 348 EGTNYAQ 354
>sp|NEF_HV2G1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 EGQNYQQ 7
EGQ Y+Q
Sbjct: 56 EGQQYRQ 62
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 GQNYQ 6
GQNYQ
Sbjct: 416 GQNYQ 420
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 3 QNYQQNC 9
Q Y +NC
Sbjct: 378 QEYNENC 384
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 EGQNYQQNC 9
+G N +Q+C
Sbjct: 612 DGTNRRQSC 620
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 1 EGQNYQQ 7
+GQNY +
Sbjct: 119 DGQNYTE 125
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus
Query: 1 EGQNYQQNC 9
EG Y NC
Sbjct: 75 EGHLYTVNC 83
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus
Query: 1 EGQNYQQNC 9
EG Y NC
Sbjct: 75 EGHLYTVNC 83
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 EGQNYQQN 8
EGQ +QN
Sbjct: 65 EGQGKEQN 72
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 1 EGQNYQQN 8
EGQ +QN
Sbjct: 65 EGQGKEQN 72
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 EGQNYQQN 8
EGQ +QN
Sbjct: 65 EGQGKEQN 72
24|Sequence|116|125|QQNCIKEVEQ
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 QNCIKEVEQ 10
+ CI+E+E+
Sbjct: 1300 KGCIREIEE 1308
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 QNCIKEVEQ 10
+CIKE+ Q
Sbjct: 313 HHCIKEIHQ 321
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 QNCIKEVEQ 10
+ CI+E+E+
Sbjct: 1300 KGCIREIEE 1308
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 QNCIKEVEQ 10
+CIKE+ Q
Sbjct: 313 HHCIKEMHQ 321
>sp|PG031_VAR67|PROTEIN C4|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 NCIKEV 8
NCI+E+
Sbjct: 47 NCIREI 52
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 NCIKE 7
NCIKE
Sbjct: 1233 NCIKE 1237
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 NCIKE 7
NCIKE
Sbjct: 1233 NCIKE 1237
25|Sequence|121|130|KEVEQFTQVA
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 KEVEQFTQV 9
KEV +TQV
Sbjct: 633 KEVSNYTQV 641
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 VEQFTQV 9
VEQFT V
Sbjct: 1399 VEQFTNV 1405
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 VEQFTQV 9
VEQFT V
Sbjct: 1399 VEQFTNV 1405
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 VEQFTQV 9
VEQFT +
Sbjct: 1399 VEQFTNI 1405
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 2 EVEQFTQ 8
EVE FTQ
Sbjct: 127 EVEDFTQ 133
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 1 KEVEQFTQVA 10
+++E+F QVA
Sbjct: 112 EKLEKFNQVA 121
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KEVEQFTQVA 10
+++E+F QVA
Sbjct: 112 EKLEKFNQVA 121
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 1 KEVEQFTQVA 10
+ +E+F QVA
Sbjct: 112 ERLEKFNQVA 121
26|Sequence|126|135|FTQVAKAYQD
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TQVAKAY 8
TQV+KAY
Sbjct: 914 TQVSKAY 920
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TQVAKAY 8
TQV+KAY
Sbjct: 914 TQVSKAY 920
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TQVAKAY 8
TQV+KAY
Sbjct: 913 TQVSKAY 919
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TQVAKAY 8
TQV+KAY
Sbjct: 913 TQVSKAY 919
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 FTQVAKA 7
FTQ AKA
Sbjct: 1141 FTQAAKA 1147
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 FTQVAKA 7
FTQ AKA
Sbjct: 1126 FTQAAKA 1132
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 FTQVAKA 7
FTQ AKA
Sbjct: 1126 FTQAAKA 1132
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 FTQVAKA 7
FTQ AKA
Sbjct: 1141 FTQAAKA 1147
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 FTQVAKA 7
FTQ AKA
Sbjct: 1124 FTQAAKA 1130
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 FTQVAKA 7
FTQ AKA
Sbjct: 1140 FTQAAKA 1146
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 FTQVAKA 7
FTQ AKA
Sbjct: 1126 FTQAAKA 1132
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TQVAKAY 8
TQ++KAY
Sbjct: 913 TQISKAY 919
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TQVAKAY 8
TQ++KAY
Sbjct: 913 TQISKAY 919
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 1 FTQVAKAY 8
+TQ KAY
Sbjct: 271 YTQALKAY 278
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 TQVAKAYQD 10
TQ+++AY D
Sbjct: 916 TQLSEAYVD 924
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 TQVAKAYQD 10
TQ+++AY D
Sbjct: 916 TQLSEAYVD 924
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 TQVAKAYQD 10
TQ+++AY D
Sbjct: 916 TQLSEAYVD 924
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 TQVAKAYQD 10
TQ+++AY D
Sbjct: 917 TQLSEAYVD 925
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 TQVAKAYQD 10
TQ+++AY D
Sbjct: 917 TQLSEAYVD 925
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 1 FTQVAKAYQ 9
FT+ AKA Q
Sbjct: 338 FTEGAKAQQ 346
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 QVAKAYQD 10
QVA YQD
Sbjct: 607 QVAVLYQD 614
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 AKAYQD 10
AKAY+D
Sbjct: 4254 AKAYKD 4259
27|Sequence|131|140|KAYQDRYQDL
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 YQDRYQDL 10
Y +RY+DL
Sbjct: 1630 YFNRYEDL 1637
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 1 KAYQDR 6
K YQDR
Sbjct: 403 KEYQDR 408
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 KAYQDRY 7
K+Y D+Y
Sbjct: 1873 KSYMDKY 1879
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 QDRYQDL 10
QD+ QDL
Sbjct: 1025 QDKLQDL 1031
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 AYQDRYQDL 10
AY+ Y+DL
Sbjct: 46 AYERLYEDL 54
>sp|PG172_MONPV|PROTEIN OPG172|Monkeypox virus (MPXV)
Query: 1 KAYQDRYQDL 10
K DRY D+
Sbjct: 159 KYINDRYNDI 168
28|Sequence|136|145|RYQDLGAYSS
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RYQDLGAY 8
RY+D G+Y
Sbjct: 84 RYEDSGSY 91
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 2 YQDLGAYSS 10
YQ++G Y S
Sbjct: 205 YQNVGTYVS 213
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 2 YQDLGAYSS 10
YQ++G Y S
Sbjct: 205 YQNVGTYVS 213
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 YQDLGAY 8
Y+DLG Y
Sbjct: 1189 YRDLGRY 1195
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RYQDLGAYSS 10
R +DLG Y++
Sbjct: 264 RTEDLGIYAN 273
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 2 YQDLGAYSS 10
YQ++G Y S
Sbjct: 205 YQNVGTYVS 213
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RYQDLGAYSS 10
R +DLG Y++
Sbjct: 264 RTEDLGIYAN 273
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 2 YQDLGAYSS 10
YQ++G Y S
Sbjct: 205 YQNVGTYVS 213
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 2 YQDLGAYSS 10
YQ++G Y S
Sbjct: 205 YQNVGTYVS 213
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 1 RYQDLGAYSS 10
R +DLG Y++
Sbjct: 264 RTEDLGIYAN 273
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RYQDLGAY 8
RY+D G Y
Sbjct: 84 RYEDSGTY 91
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 RYQDLGAY 8
RY+D G Y
Sbjct: 84 RYEDSGTY 91
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 1 RYQDLGAY 8
RY+D G Y
Sbjct: 84 RYEDSGTY 91
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 QDLGAY 8
+DLGAY
Sbjct: 373 KDLGAY 378
>sp|TEG7_HHV6Z|TEGUMENT protein UL51 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 YQDLGAYSS 10
Y+D G Y +
Sbjct: 49 YKDFGVYQN 57
>sp|TEG7_HHV6U|TEGUMENT protein UL51 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YQDLGAYSS 10
Y+D G Y +
Sbjct: 41 YKDFGVYQN 49
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 4 DLGAYS 9
DLG+YS
Sbjct: 87 DLGSYS 92
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 4 DLGAYS 9
DLG YS
Sbjct: 1162 DLGVYS 1167
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 4 DLGAYS 9
DLG YS
Sbjct: 1162 DLGVYS 1167
29|Sequence|141|150|GAYSSARKCL
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 3 YSSARKCL 10
Y+SAR C+
Sbjct: 452 YASARPCV 459
>sp|CEP3_HHV2H|CYTOPLASMIC envelopment protein 3|Human herpesvirus 2 (strain HG52)
Query: 2 AYSSARKC 9
A+S AR C
Sbjct: 4 AFSGARPC 11
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 AYSSARKC 9
+Y+SA+ C
Sbjct: 679 SYASAKSC 686
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 AYSSARKC 9
+Y+SA+ C
Sbjct: 679 SYASAKSC 686
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 AYSSARKC 9
+Y+SA+ C
Sbjct: 680 SYASAKSC 687
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 AYSSARKC 9
+Y+SA+ C
Sbjct: 680 SYASAKSC 687
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 2 AYSSARKC 9
+Y+SA+ C
Sbjct: 680 SYASAKSC 687
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GAYSSARKCL 10
G Y + R CL
Sbjct: 6470 GIYKTQRMCL 6479
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 5 SARKCL 10
SAR+CL
Sbjct: 245 SARRCL 250
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 1 GAYSSARKCL 10
G Y S +CL
Sbjct: 685 GLYESIEECL 694
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 GAYSSARKCL 10
G Y S +CL
Sbjct: 685 GLYESIEECL 694
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 GAYSSARKCL 10
G Y S +CL
Sbjct: 685 GLYESIEECL 694
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 GAYSSARKCL 10
G Y S +CL
Sbjct: 685 GLYESIEECL 694
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 GAYSSARKCL 10
G Y S +CL
Sbjct: 685 GLYESIEECL 694
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 5 SARKCL 10
SAR+CL
Sbjct: 263 SARRCL 268
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 2 AYSSARKC 9
+Y+SA+ C
Sbjct: 682 SYASAKSC 689
30|Sequence|146|155|ARKCLAKQRQ
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 401 ARQCRAPRRQ 410
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 401 ARQCRAPRRQ 410
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 400 ARQCRAPRRQ 409
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 401 ARQCRAPRRQ 410
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 402 ARQCRAPRRQ 411
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 400 ARQCRAPRRQ 409
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 399 ARQCKAPRRQ 408
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 401 ARQCRAPRRQ 410
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 401 ARQCRAPRRQ 410
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 1 ARKCLAKQRQ 10
AR+CL + Q
Sbjct: 573 ARRCLLQSMQ 582
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 ARKCLAKQRQ 10
AR+CL + Q
Sbjct: 573 ARRCLLQSMQ 582
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 ARKCLAKQRQ 10
AR+CL + Q
Sbjct: 573 ARRCLLQSMQ 582
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 KCLAKQRQ 10
+C+ +QRQ
Sbjct: 498 RCIREQRQ 505
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RKCLAKQRQ 10
R CLAK +Q
Sbjct: 305 RLCLAKFKQ 313
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 1 ARKCLAKQRQ 10
AR+CL + Q
Sbjct: 573 ARRCLLQSMQ 582
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 2 RKCLAKQRQ 10
R CLAK +Q
Sbjct: 305 RFCLAKFKQ 313
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 ARKCLAKQRQ 10
AR+CL + Q
Sbjct: 572 ARRCLLQSMQ 581
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
A++C A +RQ
Sbjct: 400 AKQCRAPRRQ 409
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 401 ARQCRAPRRQ 410
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 401 ARQCRAPRRQ 410
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
A++C A +RQ
Sbjct: 401 AKQCRAPRRQ 410
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 400 ARQCRAPRRQ 409
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 399 ARQCKAPRRQ 408
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 400 ARQCRAPRRQ 409
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 402 ARQCRAPRRQ 411
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 401 ARQCRAPRRQ 410
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 401 ARQCRAPRRQ 410
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ARKCLAKQRQ 10
AR+C A +RQ
Sbjct: 401 ARQCRAPRRQ 410
31|Sequence|151|160|AKQRQRMLQE
>sp|VCCL3_HHV8P|PROTEIN vCCL3|Human herpesvirus 8 type P
Query: 1 AKQRQRMLQE 10
AK+R R+L E
Sbjct: 84 AKRRTRLLME 93
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 KQRQRMLQ 9
+QR RMLQ
Sbjct: 147 RQRARMLQ 154
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 1 AKQRQRML 8
+K+RQR+L
Sbjct: 200 SKKRQRIL 207
>sp|U150A_HCMVM|UNCHARACTERIZED protein UL150A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AKQRQRML 8
A++RQRML
Sbjct: 235 ARRRQRML 242
32|Sequence|156|165|RMLQERKAAK
>sp|E3145_ADE06|EARLY E3B 14 kDa protein|Human adenovirus C serotype 6
Query: 1 RMLQERKAA 9
R+L+ RKAA
Sbjct: 17 RLLERRKAA 25
>sp|E3145_ADE02|EARLY 3 14.7 kDa protein|Human adenovirus C serotype 2
Query: 1 RMLQERKAA 9
R+L+ RKAA
Sbjct: 17 RLLERRKAA 25
33|Sequence|161|172|RKAAKEAAAATS
>sp|SPI2_VARV|SERINE proteinase inhibitor 2|Variola virus
Query: 6 EAAAATS 12
EAAAATS
Sbjct: 295 EAAAATS 301
>sp|SPI2_VAR67|SERINE proteinase inhibitor 2|Variola virus (isolate
Query: 6 EAAAATS 12
EAAAATS
Sbjct: 295 EAAAATS 301
>sp|SPI2_MONPV|SERINE proteinase inhibitor 2|Monkeypox virus (MPXV)
Query: 6 EAAAATS 12
EAAAATS
Sbjct: 295 EAAAATS 301