NDUB9_HUMAN Blast Output
Archaea
1|Sequence|1|10|MAFLASGPYL

>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 2 AFLASGPY 9
AFL++ PY
Sbjct: 325 AFLSTAPY 332


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 MAFLASGPYL 10
+A ASGPYL
Sbjct: 29 VARAASGPYL 38


>sp|AATC_THEAC|A-TYPE ATP synthase subunit C|Thermoplasma acidophilum (strain ATCC

Query: 2 AFLASGPY 9
AFL +GPY
Sbjct: 39 AFLYNGPY 46


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 ASGPYL 10
ASGPYL
Sbjct: 33 ASGPYL 38


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 ASGPYL 10
ASGPYL
Sbjct: 33 ASGPYL 38


>sp|SYR_METBF|ARGININE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 ASGPYL 10
ASGPY+
Sbjct: 79 ASGPYI 84


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 MAFLASGPYL 10
+A ASGPYL
Sbjct: 44 VAKAASGPYL 53




2|Sequence|6|15|SGPYLTHQQK

>sp|Y701_ARCFU|UNCHARACTERIZED protein AF_0701|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PYLTHQQK 10
P+ TH+QK
Sbjct: 239 PHFTHEQK 246


>sp|RS2_CALMQ|SMALL ribosomal subunit protein uS2|Caldivirga maquilingensis (strain

Query: 1 SGPYLTHQ 8
+ PYLTH
Sbjct: 113 TNPYLTHH 120


>sp|Y1577_ARCFU|UNCHARACTERIZED protein AF_1577|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PYLTHQQ 9
P+L+H+Q
Sbjct: 55 PFLSHEQ 61


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PYLTH 7
PYLTH
Sbjct: 204 PYLTH 208


>sp|NUCS_PYRFU|ENDONUCLEASE NucS|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GPYLTHQQK 10
G +L HQ+K
Sbjct: 62 GSFLIHQKK 70


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 2 GPYLTH 7
GPY TH
Sbjct: 319 GPYETH 324




3|Sequence|11|20|THQQKVLRLY

>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 THQQKVLRLY 10
T QQ+VL++Y
Sbjct: 1310 TPQQQVLKIY 1319


>sp|Y701_ARCFU|UNCHARACTERIZED protein AF_0701|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 THQQKVLRL 9
TH+QK++R
Sbjct: 242 THEQKLVRF 250




4|Sequence|16|25|VLRLYKRALR

>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 RLYKRALR 10
R+Y+RALR
Sbjct: 435 RVYQRALR 442




5|Sequence|21|30|KRALRHLESW

>sp|Y1279_METJA|UNCHARACTERIZED protein MJ1279|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LRHLESW 10
HLESW
Sbjct: 62 FEHLESW 68


>sp|Y1074_ARCFU|PUTATIVE antitoxin AF_1074|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RALRHLESW 10
+ALR LE W
Sbjct: 53 KALRELEEW 61


>sp|METK_THEGJ|S-ADENOSYLMETHIONINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KRALRHLE 8
K+A+RHL+
Sbjct: 120 KKAVRHLD 127


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RALRHLES 9
RAL+HL S
Sbjct: 19 RALKHLPS 26


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RALRHLES 9
RAL+HL S
Sbjct: 19 RALKHLPS 26


>sp|TRPC_THEKO|INDOLE-3-GLYCEROL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KRALRHLES 9
KRALRH ++
Sbjct: 194 KRALRHADA 202


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 KRALRHLESW 10
K+A+++L +W
Sbjct: 23 KKAVQYLRTW 32


>sp|METK_PYRFU|S-ADENOSYLMETHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KRALRHLE 8
K A+RHL+
Sbjct: 117 KNAIRHLD 124




6|Sequence|26|35|HLESWCVQRD

>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LESWCVQRD 10
L+ WC+ RD
Sbjct: 248 LQDWCITRD 256


>sp|Y1845_ARCFU|UNCHARACTERIZED protein AF_1845|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HLESWCVQR 9
HL +W V+R
Sbjct: 266 HLTTWSVER 274


>sp|Y727_METTH|UPF0280 protein MTH_727|Methanothermobacter thermautotrophicus (strain

Query: 2 LESWC 6
LESWC
Sbjct: 11 LESWC 15


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LESWCVQRD 10
L+ WC+ R+
Sbjct: 234 LKDWCITRN 242


>sp|URE3_HALMA|UREASE subunit gamma|Haloarcula marismortui (strain ATCC 43049

Query: 1 HLESWCVQR 9
++ WC++R
Sbjct: 38 YISDWCIER 46


>sp|Y1279_METJA|UNCHARACTERIZED protein MJ1279|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HLESW 5
HLESW
Sbjct: 64 HLESW 68


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LESWCVQRD 10
L+ WC+ R+
Sbjct: 227 LKDWCITRN 235


>sp|Y541_PYRHO|UNCHARACTERIZED ATP-binding protein PH0541|Pyrococcus horikoshii (strain ATCC

Query: 1 HLESWC 6
HL WC
Sbjct: 244 HLREWC 249


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LESWCVQR 9
L+ WC+ R
Sbjct: 225 LKDWCITR 232


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HLESWCVQRD 10
+L WC+ R+
Sbjct: 219 NLRDWCITRN 228


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LESWCVQR 9
L WC+ R
Sbjct: 225 LHDWCITR 232


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LESWCVQR 9
L WC+ R
Sbjct: 225 LHDWCITR 232


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 LESWCVQR 9
L WC+ R
Sbjct: 225 LHDWCITR 232


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 4 SWCVQ 8
SWCV+
Sbjct: 446 SWCVE 450


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 4 SWCVQ 8
SWCV+
Sbjct: 446 SWCVE 450


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LESWCVQR 9
L WC+ R
Sbjct: 225 LHDWCITR 232


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HLESWCVQRD 10
++E W V RD
Sbjct: 251 NVEFWVVSRD 260


>sp|Y2328_HALVD|UNCHARACTERIZED isochorismatase family protein HVO_2328|Haloferax volcanii (strain

Query: 2 LESWCVQRD 10
LE+W +RD
Sbjct: 101 LEAWLRERD 109




7|Sequence|31|40|CVQRDKYRYF

>sp|RECJ1_METJA|EXONUCLEASE RecJ1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VQRDKYRYF 10
+Q+D+++YF
Sbjct: 362 IQKDRFQYF 370


>sp|HPRT_METPE|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosphaerula palustris (strain ATCC

Query: 2 VQRDKYRYF 10
VQR+ Y YF
Sbjct: 15 VQRNGYNYF 23


>sp|HPRT_METVM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocaldococcus vulcanius (strain

Query: 2 VQRDKYRYF 10
V+R KY YF
Sbjct: 13 VKRGKYHYF 21


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 CVQRDKYRYF 10
CV + Y+YF
Sbjct: 45 CVTAEAYKYF 54


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CVQRDKYRYF 10
CV + Y+YF
Sbjct: 42 CVTAEAYKYF 51


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 CVQRDKYRYF 10
CV + Y+YF
Sbjct: 42 CVTAEAYKYF 51


>sp|HPRL3_HALTV|HGPRTASE-LIKE protein 3|Haloterrigena turkmenica (strain ATCC 51198

Query: 2 VQRDKYRYF 10
V RD Y YF
Sbjct: 18 VDRDGYEYF 26


>sp|HPRT_META3|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 VQRDKYRYF 10
VQR +Y YF
Sbjct: 14 VQRGEYTYF 22


>sp|HPRT_METMS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanohalophilus mahii (strain ATCC

Query: 2 VQRDKYRYF 10
V+R KY YF
Sbjct: 15 VKRGKYPYF 23


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CVQRDKYRY 9
C +R ++RY
Sbjct: 464 CTERHRHRY 472


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 CVQRDKYRY 9
C +R ++RY
Sbjct: 465 CTERHRHRY 473


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 CVQRDKYRY 9
C +R ++RY
Sbjct: 463 CTERHRHRY 471


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 CVQRDKYRY 9
C +R ++RY
Sbjct: 463 CTERHRHRY 471


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CVQRDKYRY 9
C +R ++RY
Sbjct: 465 CTERHRHRY 473


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 1 CVQRDKYRY 9
C +R ++RY
Sbjct: 465 CTERHRHRY 473


>sp|DPHB_METLZ|DIPHTHINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 VQRDKYRY 9
+Q+DK RY
Sbjct: 167 IQKDKERY 174


>sp|Y818_METJA|UNCHARACTERIZED protein MJ0818|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VQRDKYRY 9
V+RDKYR+
Sbjct: 56 VKRDKYRH 63


>sp|HPRL_NATPD|HGPRTASE-LIKE protein|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VQRDKYRYF 10
+++D Y YF
Sbjct: 14 IEKDGYHYF 22


>sp|HPRL_HALSA|HGPRTASE-LIKE protein|Halobacterium salinarum (strain ATCC 700922

Query: 2 VQRDKYRYF 10
+++D Y YF
Sbjct: 14 IEKDGYHYF 22


>sp|HPRL_HALS3|HGPRTASE-LIKE protein|Halobacterium salinarum (strain ATCC 29341

Query: 2 VQRDKYRYF 10
+++D Y YF
Sbjct: 14 IEKDGYHYF 22


>sp|HPRL_HALMD|HGPRTASE-LIKE protein|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 VQRDKYRYF 10
+++D Y YF
Sbjct: 14 IEKDGYHYF 22


>sp|HPRL2_HALJB|HGPRTASE-LIKE protein 2|Halalkalicoccus jeotgali (strain DSM 18796

Query: 2 VQRDKYRYF 10
+++D Y YF
Sbjct: 14 IEKDGYHYF 22


>sp|SYS_METST|SERINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 RDKYRY 9
RD+YRY
Sbjct: 96 RDEYRY 101


>sp|RNP2_THEON|RIBONUCLEASE P protein component 2|Thermococcus onnurineus (strain NA1)

Query: 4 RDKYRY 9
RDK+RY
Sbjct: 13 RDKHRY 18


>sp|COBD_METVS|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus vannielii (strain

Query: 3 QRDKYRYF 10
+ +KYRY+
Sbjct: 190 KNEKYRYY 197


>sp|Y2414_ARCFU|UNCHARACTERIZED HTH-type transcriptional regulator AF_2414|Archaeoglobus fulgidus

Query: 6 KYRYF 10
KYRYF
Sbjct: 85 KYRYF 89


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VQRDKYRYF 10
+QR+ Y YF
Sbjct: 285 LQREAYSYF 293




8|Sequence|36|45|KYRYFACLMR

>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 1 KYRYFACLMR 10
+YRYF ++R
Sbjct: 123 EYRYFVRILR 132


>sp|Y2414_ARCFU|UNCHARACTERIZED HTH-type transcriptional regulator AF_2414|Archaeoglobus fulgidus

Query: 1 KYRYF 5
KYRYF
Sbjct: 85 KYRYF 89


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 KYRYFAC 7
K RY+AC
Sbjct: 319 KERYYAC 325


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KYRYFAC 7
K RY+AC
Sbjct: 319 KERYYAC 325




9|Sequence|41|50|ACLMRARFEE

>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ACLMRARFE 9
ACL +AR++
Sbjct: 301 ACLKKARYD 309


>sp|DNAK_PICTO|CHAPERONE protein DnaK|Picrophilus torridus (strain ATCC 700027

Query: 3 LMRARFEE 10
L RA+FEE
Sbjct: 276 LTRAKFEE 283


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 3 LMRARFEE 10
L RA+FEE
Sbjct: 17 LKRAKFEE 24


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 5 RARFEE 10
RARFEE
Sbjct: 109 RARFEE 114




10|Sequence|46|55|ARFEEHKNEK

>sp|DAPAL_THEAC|UNCHARACTERIZED DapA-like lyase Ta1157|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ARFEEHKNEK 10
+R HKNEK
Sbjct: 171 SRIIRHKNEK 180


>sp|Y592_METVS|UPF0200 protein Mevan_0592|Methanococcus vannielii (strain ATCC 35089

Query: 3 FEEHKNEK 10
FE++KNEK
Sbjct: 76 FEKYKNEK 83


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ARFEEHK 7
A+FEEH+
Sbjct: 333 AKFEEHR 339


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 4 EEHKNEK 10
+EH NEK
Sbjct: 574 QEHPNEK 580


>sp|AMZA_METKA|ARCHAEMETZINCIN kandleri (strain AV19 /

Query: 2 RFEEHKNE 9
RFEEH +E
Sbjct: 21 RFEEHVSE 28


>sp|MFNA_METVS|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus vannielii

Query: 4 EEHKNE 9
+EHKNE
Sbjct: 332 DEHKNE 337


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ARFEEHKNEK 10
ARF+ HK K
Sbjct: 250 ARFQFHKQNK 259




11|Sequence|51|60|HKNEKDMAKA

>sp|HELS_METVS|ATP-DEPENDENT DNA helicase Hel308|Methanococcus vannielii (strain ATCC 35089

Query: 2 KNEKDMAKA 10
KNEKD+ KA
Sbjct: 398 KNEKDVEKA 406


>sp|TBP_PYRNV|TATA-BOX-BINDING protein|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KNEKDMAKA 10
K+EKD+A A
Sbjct: 161 KSEKDVATA 169


>sp|TBP_PYRCJ|TATA-BOX-BINDING protein|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KNEKDMAKA 10
K+EKD+A A
Sbjct: 161 KSEKDVATA 169


>sp|TBP_PYRAE|TATA-BOX-BINDING protein|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KNEKDMAKA 10
K+EKD+A A
Sbjct: 161 KSEKDVATA 169


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NEKDMAKA 10
NEKD+A A
Sbjct: 458 NEKDLALA 465




12|Sequence|56|65|DMAKATQLLK

>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 DMAKATQLLK 10
D KATQLLK
Sbjct: 258 DTIKATQLLK 267


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 1 DMAKATQLLK 10
D KATQLLK
Sbjct: 252 DTIKATQLLK 261


>sp|TRPF_PYRAR|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DMAKATQLLK 10
DMAK LLK
Sbjct: 194 DMAKVRALLK 203




13|Sequence|61|70|TQLLKEAEEE

>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 TQLLKEAEEE 10
TQ++KE EE+
Sbjct: 747 TQMMKELEEK 756


>sp|CDVB3_SULAC|CELL division protein B3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QLLKEAEE 9
QLLKEAE+
Sbjct: 148 QLLKEAED 155


>sp|AROE_METST|SHIKIMATE dehydrogenase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 1 TQLLKEAEEE 10
TQLLK+++++
Sbjct: 232 TQLLKQSKKQ 241


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 QLLKEAEEE 10
QLLK+AE++
Sbjct: 226 QLLKDAEKD 234


>sp|HISX_PYRAE|HISTIDINOL dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QLLKEAEE 9
+LLK+AEE
Sbjct: 235 ELLKKAEE 242


>sp|IF2P_THEAC|PROBABLE translation initiation factor IF-2|Thermoplasma acidophilum (strain

Query: 2 QLLKEAEEE 10
Q++KE EEE
Sbjct: 335 QVMKEIEEE 343




14|Sequence|66|75|EAEEEFWYRQ

>sp|OGG1_SULAC|8-OXOGUANINE DNA glycosylase/AP lyase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 EAEEEFWYRQ 10
+A+EE W+R+
Sbjct: 27 KADEEVWFRE 36


>sp|OGG1_SULTO|8-OXOGUANINE DNA glycosylase/AP lyase|Sulfurisphaera tokodaii (strain DSM

Query: 2 AEEEFWYRQ 10
AEE W+R+
Sbjct: 28 AEENVWFRE 36


>sp|SYDND_HALSA|ASPARTATE--TRNA(ASP/ASN) ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 EEEFWYRQ 10
+E+F+YRQ
Sbjct: 332 DEKFYYRQ 339


>sp|THI4_METTP|THIAMINE thiazole synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 EEEFWYRQ 10
E + WYR+
Sbjct: 86 EYDIWYRE 93


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EAEEEFWY 8
E +E FWY
Sbjct: 1099 ELDERFWY 1106


>sp|Y1039_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 2 AEEEFWYRQ 10
A+ FWYR+
Sbjct: 158 AKPGFWYRK 166




15|Sequence|71|80|FWYRQHPQPY

>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 WYRQHPQP 9
WYR P+P
Sbjct: 132 WYRDMPEP 139


>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 2 WYRQH 6
WYRQH
Sbjct: 392 WYRQH 396


>sp|ILVC_PYRAB|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 3 YRQHPQPY 10
YR+H +PY
Sbjct: 93 YREHIEPY 100


>sp|COFD_METBU|2-PHOSPHO-L-LACTATE transferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FWYRQHPQP 9
FW +QH P
Sbjct: 150 FWVKQHGVP 158


>sp|MDH_THEVO|MALATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 WYRQHPQ 8
W ++HPQ
Sbjct: 319 WLKKHPQ 325


>sp|ALF1_HALSA|FRUCTOSE-BISPHOSPHATE aldolase class 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 WYRQHPQPY 10
W R+HP +
Sbjct: 234 WQREHPAAF 242


>sp|ALF1_HALS3|FRUCTOSE-BISPHOSPHATE aldolase class 1|Halobacterium salinarum (strain ATCC 29341

Query: 2 WYRQHPQPY 10
W R+HP +
Sbjct: 234 WQREHPAAF 242


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FWYRQHPQPY 10
FW+ HP+ Y
Sbjct: 233 FWFFGHPEVY 242


>sp|CUTC_SULAC|GLYCERALDEHYDE dehydrogenase small chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 FWYRQHPQP 9
F+ ++HP P
Sbjct: 120 FFLKEHPNP 128


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 FWYRQHPQPY 10
FW+ HP+ Y
Sbjct: 289 FWFFGHPEVY 298


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 1 FWYRQH 6
FW RQH
Sbjct: 190 FWRRQH 195


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FWYRQH 6
FW RQH
Sbjct: 190 FWRRQH 195


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 FWYRQH 6
FW RQH
Sbjct: 190 FWRRQH 195


>sp|AOX1_AERPE|HEME-COPPER oxidase subunit I+III|Aeropyrum pernix (strain ATCC 700893

Query: 1 FWYRQHPQPY 10
FW+ HP+ Y
Sbjct: 243 FWFFGHPEVY 252


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FWYRQH 6
FW RQH
Sbjct: 190 FWRRQH 195


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FWYRQH 6
FW RQH
Sbjct: 190 FWRRQH 195


>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 FWYRQH 6
FW RQH
Sbjct: 190 FWRRQH 195


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FWYRQH 6
FW RQH
Sbjct: 190 FWRRQH 195


>sp|ILVC_METS5|KETOL-ACID reductoisomerase (NAD(P)(+))|Metallosphaera sedula (strain ATCC

Query: 3 YRQHPQPY 10
YR+ QPY
Sbjct: 93 YRERVQPY 100


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FWYRQHPQ 8
FW R PQ
Sbjct: 369 FWMRDFPQ 376


>sp|NADA_PYRAE|QUINOLINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WYRQHP 7
W R+HP
Sbjct: 96 WRRRHP 101


>sp|MT51_METJA|PUTATIVE type II methyltransferase M.MJ0563P|Methanocaldococcus jannaschii

Query: 2 WYRQHPQ 8
WY+ HP+
Sbjct: 235 WYKLHPK 241


>sp|GLCDH_THEAC|GLUCOSE 1-dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WYRQHP 7
W R+HP
Sbjct: 322 WNRRHP 327


>sp|GLYAR_HALSA|GLYCOLALDEHYDE reductase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FWYRQHP 7
++Y QHP
Sbjct: 141 WYYEQHP 147


>sp|HMGCS_METVS|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FWYRQH 6
FW R+H
Sbjct: 189 FWRREH 194


>sp|HMGCS_METM7|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C7 /

Query: 1 FWYRQH 6
FW R+H
Sbjct: 189 FWRREH 194


>sp|HPRT_METKA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 FWYRQHP 7
+WY HP
Sbjct: 18 YWYFIHP 24


>sp|HMGCS_METM6|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C6 /

Query: 1 FWYRQH 6
FW R+H
Sbjct: 189 FWRREH 194


>sp|RS3A_PYRAR|SMALL ribosomal subunit protein eS1|Pyrobaculum arsenaticum (strain DSM

Query: 2 WYRQHPQPY 10
W+ H PY
Sbjct: 27 WFAVHAPPY 35


>sp|HMGCS_METM5|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C5 /

Query: 1 FWYRQH 6
FW R+H
Sbjct: 189 FWRREH 194


>sp|HMGCS_METMP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FWYRQH 6
FW R+H
Sbjct: 189 FWRREH 194


>sp|QOX1_SULAC|QUINOL oxidase subunit 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FWYRQHPQPY 10
FW+ HP Y
Sbjct: 230 FWFYGHPVVY 239


>sp|PUR7_CENSY|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Cenarchaeum symbiosum (strain A)

Query: 1 FWYRQHPQP 9
+W+R+ P P
Sbjct: 52 YWFRRLPIP 60


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 YRQHPQPY 10
Y QHP+ Y
Sbjct: 535 YTQHPEKY 542


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 2 WYRQH 6
WYR+H
Sbjct: 421 WYREH 425


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FWYRQHPQPY 10
FW +H Q Y
Sbjct: 24 FWTLRHDQVY 33


>sp|RL34_METKA|LARGE ribosomal subunit protein eL34|Methanopyrus kandleri (strain AV19

Query: 1 FWYRQHPQPY 10
FW R+ QP+
Sbjct: 90 FWERKREQPW 99


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 QHPQPY 10
+HP PY
Sbjct: 159 RHPMPY 164




16|Sequence|76|85|HPQPYIFPDS

>sp|PYRDA_AERPE|PUTATIVE dihydroorotate dehydrogenase A (fumarate)|Aeropyrum pernix

Query: 1 HPQPYIFP 8
+PQP+++P
Sbjct: 58 YPQPHLYP 65


>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 HPQPYIFPDS 10
H +P++ PDS
Sbjct: 381 HLEPFLAPDS 390


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 29341

Query: 1 HPQPYIFPDS 10
H +P++ PDS
Sbjct: 381 HLEPFLAPDS 390


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPYIFPD 9
PQP+ +PD
Sbjct: 116 PQPHPYPD 123


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPYIFPD 9
PQP+ +PD
Sbjct: 118 PQPHPYPD 125


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPYIFPD 9
PQP+ +PD
Sbjct: 115 PQPHPYPD 122


>sp|GCH1_SULAC|GTP cyclohydrolase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PQPYI 6
PQPYI
Sbjct: 56 PQPYI 60


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPYIFPD 9
PQP+ +PD
Sbjct: 116 PQPHPYPD 123


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 PQPYIF 7
P PYIF
Sbjct: 397 PAPYIF 402


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPYIFPD 9
PQP+ +PD
Sbjct: 116 PQPHPYPD 123


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 4 PYIFP 8
PYIFP
Sbjct: 276 PYIFP 280


>sp|KDGA_SACS2|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HPQPYIFP 8
+P+P IFP
Sbjct: 273 YPRPPIFP 280


>sp|AAT_METJA|PROBABLE aspartate aminotransferase|Methanocaldococcus jannaschii (strain

Query: 5 YIFPD 9
YIFPD
Sbjct: 313 YIFPD 317


>sp|TFRA_METTM|FUMARATE reductase (CoM/CoB) subunit A|Methanothermobacter marburgensis

Query: 1 HPQPYIFPDS 10
HP ++P+S
Sbjct: 236 HPTGMVYPES 245


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 PQPYIF 7
P PY+F
Sbjct: 428 PSPYVF 433


>sp|RIBL_NATPD|FAD synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HPQPYIFPD 9
H QP I PD
Sbjct: 43 HKQPPIVPD 51


>sp|KDGA_SACSO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (Sulfolobus solfataricus)

Query: 1 HPQPYIFP 8
+P+P IFP
Sbjct: 259 YPRPPIFP 266


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 2 PQPYIF 7
P PY+F
Sbjct: 428 PSPYVF 433


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HPQPYIFPD 9
HP PY P+
Sbjct: 415 HPNPYEHPN 423


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 PQPYIF 7
P PY+F
Sbjct: 428 PSPYVF 433


>sp|MFNA_METKA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanopyrus kandleri

Query: 4 PYIFPDS 10
PY+FP++
Sbjct: 41 PYLFPNA 47




17|Sequence|81|90|IFPDSPGGTS

>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 IFPDSPGG 8
+F D PGG
Sbjct: 685 VFKDKPGG 692


>sp|SFSA_THEVO|SUGAR fermentation stimulation protein homolog|Thermoplasma volcanium

Query: 1 IFPDSP 6
IFPD+P
Sbjct: 126 IFPDAP 131


>sp|EF1B_METKA|ELONGATION factor 1-beta|Methanopyrus kandleri (strain AV19 /

Query: 1 IFPDSPGGT 9
+ PD+ GGT
Sbjct: 61 VVPDAEGGT 69


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 2 FPDSPGGTS 10
FP + GGT+
Sbjct: 222 FPQAKGGTA 230


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 3 PDSPGG 8
PD PGG
Sbjct: 183 PDDPGG 188


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FPDSPGGTS 10
FP + GGT+
Sbjct: 222 FPQAKGGTA 230


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FPDSPGGTS 10
FP + GGT+
Sbjct: 222 FPQAKGGTA 230


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IFPDSPGGTS 10
IFP + GGT+
Sbjct: 221 IFPIAKGGTA 230


>sp|ASD_METTH|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanothermobacter

Query: 1 IFPDSPGG 8
IFPD GG
Sbjct: 82 IFPDGSGG 89


>sp|EF1B_HALSA|ELONGATION factor 1-beta|Halobacterium salinarum (strain ATCC 700922

Query: 1 IFPDSPGGTS 10
I PD GGT
Sbjct: 56 IVPDDSGGTE 65


>sp|EF1B_HALS3|ELONGATION factor 1-beta|Halobacterium salinarum (strain ATCC 29341

Query: 1 IFPDSPGGTS 10
I PD GGT
Sbjct: 56 IVPDDSGGTE 65


>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IFPDSPG 7
+FP SPG
Sbjct: 190 LFPPSPG 196


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 1 IFPDSPGGTS 10
IFP + GGT+
Sbjct: 220 IFPIAKGGTA 229


>sp|CBIM1_METBF|PUTATIVE cobalt transport protein CbiM|Methanosarcina barkeri (strain Fusaro

Query: 2 FPDSPGG 8
FP +PGG
Sbjct: 164 FPANPGG 170


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 2 FPDSPGGTS 10
FP + GGT+
Sbjct: 219 FPQAKGGTA 227


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IFPDSPGGTS 10
IFP + GGT+
Sbjct: 220 IFPIAKGGTA 229


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IFPDSPGGTS 10
IFP + GGT+
Sbjct: 220 IFPIAKGGTA 229


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IFPDSPGGTS 10
IFP + GGT+
Sbjct: 220 IFPIAKGGTA 229


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IFPDSPGGTS 10
IFP + GGT+
Sbjct: 220 IFPIAKGGTA 229


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IFPDSPGGTS 10
IFP + GGT+
Sbjct: 220 IFPIAKGGTA 229


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 1 IFPDSPGGTS 10
IFP + GGT+
Sbjct: 220 IFPIAKGGTA 229


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 IFPDSPGGTS 10
IFP + GGT+
Sbjct: 220 IFPIAKGGTA 229


>sp|MPTA_HALVD|GTP cyclohydrolase MptA|Haloferax volcanii (strain ATCC 29605

Query: 1 IFPDSPGG 8
+F D PGG
Sbjct: 49 VFVDLPGG 56


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FPDSPG 7
PDSPG
Sbjct: 159 LPDSPG 164


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 IFPDSPGGTS 10
I PDS GT+
Sbjct: 173 IIPDSAHGTN 182


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 3 PDSPG 7
PDSPG
Sbjct: 166 PDSPG 170


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 IFPDSPGGTS 10
I PDS GT+
Sbjct: 162 IIPDSAHGTN 171


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IFPDSPGGTS 10
+FP + GGT+
Sbjct: 216 LFPVAKGGTA 225


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IFPDSPGGTS 10
+FP + GGT+
Sbjct: 216 LFPVAKGGTA 225


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IFPDSPGGTS 10
+FP + GGT+
Sbjct: 221 VFPIAKGGTA 230


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 1 IFPDSPGGTS 10
+FP + GGT+
Sbjct: 224 LFPIAKGGTA 233


>sp|EF1B_NATPD|ELONGATION factor 1-beta|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IFPDSPGGT 9
I PD GGT
Sbjct: 56 IIPDEAGGT 64


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 1 IFPDSPGGTS 10
+FP + GGT+
Sbjct: 216 LFPIAKGGTA 225




18|Sequence|86|95|PGGTSYERYD

>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 2 GGTSYERYD 10
GGT+ ERYD
Sbjct: 132 GGTAAERYD 140


>sp|MPTA_PYRFU|GTP cyclohydrolase MptA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GGTSYERYD 10
G TSYE YD
Sbjct: 122 GKTSYEPYD 130


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 GGTSYERYD 10
G TS++RYD
Sbjct: 619 GETSFKRYD 627


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 GGTSYERYD 10
G TS++RYD
Sbjct: 619 GETSFKRYD 627


>sp|MPTA_THEKO|GTP cyclohydrolase MptA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 TSYERYD 10
TSYE YD
Sbjct: 124 TSYEPYD 130


>sp|RS10_PYRAR|SMALL ribosomal subunit protein uS10|Pyrobaculum arsenaticum (strain

Query: 1 PGGTSYERYD 10
P G Y YD
Sbjct: 58 PSGQGYHTYD 67


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 PGGTSYERY 9
PGG E+Y
Sbjct: 176 PGGVYVEKY 184


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 PGGTSYERY 9
PGG E+Y
Sbjct: 176 PGGVYVEKY 184


>sp|GGR_THEVO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PGGTSYERY 9
PGG++ RY
Sbjct: 13 PGGSTAARY 21


>sp|Y745_PYRAE|PROTEIN PAE0745|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PGGTSYER 8
PGG YER
Sbjct: 195 PGGEVYER 202


>sp|PYRC_METST|DIHYDROOROTASE stadtmanae (strain ATCC 43021

Query: 4 TSYERY 9
T+YERY
Sbjct: 262 TTYERY 267


>sp|CBID_SULTO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PGGTSYE 7
PG TS+E
Sbjct: 203 PGNTSFE 209


>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 TSYERYD 10
TSY +YD
Sbjct: 70 TSYSKYD 76


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 PGGTSYERY 9
PGG E+Y
Sbjct: 176 PGGVYVEKY 184


>sp|RL3_METLZ|LARGE ribosomal subunit protein uL3|Methanocorpusculum labreanum (strain

Query: 2 GGTSYERYD 10
GG++ ER+D
Sbjct: 165 GGSAQERFD 173


>sp|Y1005_PYRIL|PROTEIN Pisl_1005|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PGGTSYER 8
PGG YER
Sbjct: 195 PGGEIYER 202


>sp|Y945_METJA|UNCHARACTERIZED protein MJ0945|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGGTSYERYD 10
P GT + RY+
Sbjct: 165 PAGTDFYRYE 174


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 1 PGGTSYERYD 10
PGG+SY D
Sbjct: 308 PGGSSYRPGD 317


>sp|KPRS_THEAC|RIBOSE-PHOSPHATE pyrophosphokinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PGGTSYERYD 10
P G Y RYD
Sbjct: 33 PDGELYVRYD 42


>sp|KPRS_THEVO|RIBOSE-PHOSPHATE pyrophosphokinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PGGTSYERYD 10
P G Y RYD
Sbjct: 33 PDGELYLRYD 42


>sp|PROB_NATPD|GLUTAMATE 5-kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 SYERYD 10
S+ERYD
Sbjct: 111 SFERYD 116


>sp|MTBA_METBA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina barkeri

Query: 2 GGTSYERY 9
GG YE+Y
Sbjct: 210 GGEFYEKY 217


>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GGTSYERY 9
GG YE+Y
Sbjct: 210 GGEFYEKY 217


>sp|MTBA_METAC|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina acetivorans (strain ATCC

Query: 2 GGTSYERY 9
GG YE+Y
Sbjct: 210 GGEFYEKY 217


>sp|CAS1_KORCO|CRISPR-ASSOCIATED endonuclease Cas1|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GGTSYERYD 10
GGT+ RY+
Sbjct: 86 GGTARNRYE 94


>sp|MTM3_METJA|TYPE II methyltransferase M.MjaIII|Methanocaldococcus jannaschii (strain

Query: 4 TSYERYD 10
TSY +YD
Sbjct: 212 TSYTKYD 218




19|Sequence|91|100|YERYDCYKVP

>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YERYDC 6
+E+YDC
Sbjct: 342 FEKYDC 347


>sp|EF1A_CALMQ|ELONGATION factor 1-alpha|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 RYDCYKVP 10
RYD KVP
Sbjct: 189 RYDVNKVP 196


>sp|Y145_ARCFU|UNCHARACTERIZED protein AF_0145|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RYDCYKVP 10
RYD KVP
Sbjct: 31 RYDMRKVP 38


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 RYDCYKVP 10
RYD +++P
Sbjct: 275 RYDLWEIP 282


>sp|Y453_METS3|PUTATIVE HTH-type transcriptional regulatory protein|Methanobrevibacter

Query: 1 YERYD 5
YERYD
Sbjct: 90 YERYD 94


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ERYDCYKVP 10
E+YD K+P
Sbjct: 164 EKYDPAKIP 172


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 2 ERYDCYKV 9
E Y+CY++
Sbjct: 16 ETYECYEI 23


>sp|Y1056_PYRHO|PROBABLE S-adenosyl-L-methionine-binding protein PH1056|Pyrococcus

Query: 2 ERYDCYK 8
ERYDC K
Sbjct: 119 ERYDCPK 125


>sp|CDC61_HALSA|ORC1-TYPE DNA replication protein 1|Halobacterium salinarum (strain ATCC

Query: 4 YDCYKVP 10
YD Y++P
Sbjct: 140 YDLYRIP 146


>sp|CAS1_NANEQ|CRISPR-ASSOCIATED endonuclease Cas1|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 RYDCYKV 9
RY+C KV
Sbjct: 117 RYNCIKV 123




20|Sequence|96|105|CYKVPEWCLD

>sp|PMDHS_METTP|PHOSPHOMEVALONATE dehydratase small subunit|Methanothrix thermoacetophila (strain DSM

Query: 3 KVPEWCLD 10
+VPEW LD
Sbjct: 105 RVPEWILD 112


>sp|RS15_METTP|SMALL ribosomal subunit protein uS15|Methanothrix thermoacetophila

Query: 3 KVPEWC 8
K+PEWC
Sbjct: 21 KLPEWC 26


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YKVPEW 7
YK+PEW
Sbjct: 345 YKIPEW 350


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 2 YKVPEWCLD 10
Y++ WCLD
Sbjct: 117 YEISAWCLD 125


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 3 KVPEWCLD 10
KVPE CLD
Sbjct: 417 KVPENCLD 424


>sp|UPPS_METKA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanopyrus

Query: 4 VPEWCLD 10
V EWCLD
Sbjct: 77 VLEWCLD 83


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 YKVPEW 7
YKVP+W
Sbjct: 346 YKVPDW 351


>sp|RS13_THEAC|SMALL ribosomal subunit protein uS13|Thermoplasma acidophilum (strain

Query: 2 YKVPEWCLD 10
Y +PEW L+
Sbjct: 95 YDLPEWLLN 103


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 2 YKVPEWCLD 10
Y+VP W L+
Sbjct: 340 YRVPGWILE 348


>sp|PURA_ARCFU|ADENYLOSUCCINATE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CYKVPEW 7
CY V EW
Sbjct: 289 CYGVTEW 295


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 2 YKVPEWCLD 10
Y++ WCL+
Sbjct: 117 YEISAWCLE 125


>sp|RNH2_METMA|RIBONUCLEASE HII|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 EWCLD 10
EWC+D
Sbjct: 169 EWCID 173


>sp|TRM1_PYRCJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum calidifontis

Query: 2 YKVPEWCLD 10
YK+PE+ +D
Sbjct: 303 YKLPEFAVD 311


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 2 YKVPEWCLD 10
Y++ WCL+
Sbjct: 117 YEISAWCLE 125


>sp|Y297_METJA|UNCHARACTERIZED protein MJ0297|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KVPEW 7
KVPEW
Sbjct: 134 KVPEW 138


>sp|CAPPA_SULAC|PHOSPHOENOLPYRUVATE carboxylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KVPEW 7
KVPEW
Sbjct: 17 KVPEW 21


>sp|CAPPA_SACS2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KVPEW 7
KVPEW
Sbjct: 17 KVPEW 21


>sp|CAPPA_SACI7|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 KVPEW 7
KVPEW
Sbjct: 17 KVPEW 21


>sp|CAPPA_SACI6|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 KVPEW 7
KVPEW
Sbjct: 17 KVPEW 21


>sp|CAPPA_SACI4|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 KVPEW 7
KVPEW
Sbjct: 17 KVPEW 21


>sp|CAPPA_SACI3|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 KVPEW 7
KVPEW
Sbjct: 17 KVPEW 21


>sp|CAPPA_SACI2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 KVPEW 7
KVPEW
Sbjct: 17 KVPEW 21


>sp|CAPPA_SACI1|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 KVPEW 7
KVPEW
Sbjct: 17 KVPEW 21


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 YKVPEWCLD 10
Y++ WCL+
Sbjct: 95 YEISAWCLE 103


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 3 KVPEWCLD 10
K+P W LD
Sbjct: 354 KIPRWDLD 361


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 3 KVPEWCLD 10
K+P W LD
Sbjct: 354 KIPRWDLD 361


>sp|IF2G_HALLT|TRANSLATION initiation factor 2 subunit|Halorubrum lacusprofundi (strain ATCC

Query: 1 CYKVPEWCLD 10
CY V E C D
Sbjct: 67 CYTVDEECED 76


>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 3 KVPEWCLD 10
+V EWC D
Sbjct: 59 RVLEWCSD 66


>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 2 YKVPEWCL 9
YKVP W +
Sbjct: 150 YKVPIWTI 157


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 YKVPEW 7
YK+P W
Sbjct: 183 YKIPSW 188


>sp|RL5_THEVO|LARGE ribosomal subunit protein uL5|Thermoplasma volcanium (strain ATCC

Query: 2 YKVPEWCLD 10
YK+P++ D
Sbjct: 84 YKIPDYSFD 92


>sp|UPPS_ARCFU|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Archaeoglobus

Query: 3 KVPEWCLD 10
+V EWC D
Sbjct: 55 EVLEWCWD 62


>sp|CBIX_SACS2|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KVPEW 7
K+PEW
Sbjct: 12 KIPEW 16


>sp|CBIX_SACI7|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 KVPEW 7
K+PEW
Sbjct: 12 KIPEW 16


>sp|CBIX_SACI6|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 KVPEW 7
K+PEW
Sbjct: 12 KIPEW 16


>sp|CBIX_SACI4|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 KVPEW 7
K+PEW
Sbjct: 12 KIPEW 16


>sp|CBIX_SACI3|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.16.27)

Query: 3 KVPEW 7
K+PEW
Sbjct: 12 KIPEW 16


>sp|CBIX_SACI2|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 KVPEW 7
K+PEW
Sbjct: 12 KIPEW 16


>sp|CBIX_SACI1|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 KVPEW 7
K+PEW
Sbjct: 12 KIPEW 16


>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 5 PEWCLD 10
PEW +D
Sbjct: 84 PEWAID 89


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 5 PEWCLD 10
PEW +D
Sbjct: 84 PEWAID 89


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 4 VPEWCLD 10
VPE C+D
Sbjct: 802 VPESCMD 808


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 4 VPEWCLD 10
VPE C+D
Sbjct: 802 VPESCMD 808


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 4 VPEWCLD 10
VPE C+D
Sbjct: 802 VPESCMD 808


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 4 VPEWCLD 10
VPE C+D
Sbjct: 802 VPESCMD 808


>sp|RS13_METST|SMALL ribosomal subunit protein uS13|Methanosphaera stadtmanae (strain

Query: 2 YKVPEWCLD 10
+ +PEW L+
Sbjct: 74 FGIPEWFLN 82


>sp|THII_SULAC|PROBABLE tRNA sulfurtransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KVPEWCL 9
K+PE+C+
Sbjct: 326 KLPEYCV 332


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YKVPEWCLD 10
Y++P W ++
Sbjct: 351 YRIPVWIME 359


>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 1 CYKVPEW 7
CY V +W
Sbjct: 122 CYNVRDW 128


>sp|RNP2_METVS|RIBONUCLEASE P protein component 2|Methanococcus vannielii (strain ATCC 35089

Query: 1 CYKVPEWCLD 10
C KV W +D
Sbjct: 48 CSKVNPWLID 57


>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 CYKVPEWC 8
CY V E C
Sbjct: 67 CYTVAETC 74


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 CYKVPEWC 8
CY V E C
Sbjct: 67 CYTVAETC 74


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 CYKVPEW 7
CY V +W
Sbjct: 123 CYDVRDW 129


>sp|FAU1_PYRAR|PROBABLE ribonuclease FAU-1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 KVPEWCLD 10
K P WC +
Sbjct: 430 KTPIWCTE 437


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 4 VPEWCLD 10
VPE C+D
Sbjct: 802 VPESCMD 808


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 3 KVPEWCLD 10
KVP W L+
Sbjct: 357 KVPRWDLE 364


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 4 VPEWCLD 10
+P+W +D
Sbjct: 109 IPDWLID 115




21|Sequence|101|110|EWCLDDWHPS

>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 LDDWHP 9
DDWHP
Sbjct: 493 FDDWHP 498


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 1 EWCLDDWHPS 10
E CLDD H S
Sbjct: 22 EQCLDDAHGS 31


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EWCLDDWHP 9
E +DDW P
Sbjct: 191 ELIVDDWRP 199


>sp|AATC_METTP|A-TYPE ATP synthase subunit C|Methanothrix thermoacetophila (strain DSM

Query: 2 WCLDDWHP 9
W L ++HP
Sbjct: 299 WSLSNYHP 306


>sp|PURT_SULTO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfurisphaera tokodaii

Query: 4 LDDWHPS 10
++ WHPS
Sbjct: 236 VESWHPS 242


>sp|PURT_SACS2|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Saccharolobus

Query: 4 LDDWHPS 10
++ WHPS
Sbjct: 235 VESWHPS 241


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CLDDWHP 9
C DD HP
Sbjct: 242 CTDDSHP 248


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 3 CLDDWHP 9
C DD HP
Sbjct: 242 CTDDSHP 248


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CLDDWHP 9
C DD HP
Sbjct: 242 CTDDSHP 248


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 6 DWHPS 10
DWHP+
Sbjct: 468 DWHPN 472


>sp|SRP54_METTH|SIGNAL recognition particle 54 kDa|Methanothermobacter thermautotrophicus

Query: 3 CLDDWHPS 10
C D W P+
Sbjct: 134 CTDTWRPA 141


>sp|SRP54_METST|SIGNAL recognition particle 54 kDa|Methanosphaera stadtmanae (strain ATCC

Query: 3 CLDDWHPS 10
C D W P+
Sbjct: 134 CTDTWRPA 141


>sp|SRP54_METS3|SIGNAL recognition particle 54 kDa|Methanobrevibacter smithii (strain ATCC

Query: 3 CLDDWHPS 10
C D W P+
Sbjct: 134 CTDTWRPA 141


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 6 DWHP 9
DWHP
Sbjct: 253 DWHP 256


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 6 DWHP 9
DWHP
Sbjct: 203 DWHP 206


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EWCLDDW 7
EW LDD+
Sbjct: 1125 EWGLDDY 1131


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain DSM

Query: 3 CLDDWHP 9
C D W P
Sbjct: 135 CTDTWRP 141


>sp|RNP2_METVS|RIBONUCLEASE P protein component 2|Methanococcus vannielii (strain ATCC 35089

Query: 2 WCLDDWHPS 10
W +D HPS
Sbjct: 54 WLIDYRHPS 62


>sp|MDH_NATPD|MALATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EWCLDDW 7
EW LDD+
Sbjct: 278 EWDLDDY 284


>sp|LYSZ_NITMS|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Nitrosopumilus

Query: 4 LDDWHPS 10
+DD HPS
Sbjct: 11 VDDLHPS 17


>sp|RS5_PYRHO|SMALL ribosomal subunit protein uS5|Pyrococcus horikoshii (strain ATCC

Query: 4 LDDWHP 9
LD+W P
Sbjct: 13 LDEWQP 18


>sp|RS5_PYRAB|SMALL ribosomal subunit protein uS5|Pyrococcus abyssi (strain GE5 /

Query: 4 LDDWHP 9
LD+W P
Sbjct: 13 LDEWQP 18


>sp|RS3_METBU|SMALL ribosomal subunit protein uS3|Methanococcoides burtonii (strain DSM

Query: 5 DDWHPS 10
D WHP+
Sbjct: 292 DYWHPT 297


>sp|RS3A_THESM|SMALL ribosomal subunit protein eS1|Thermococcus sibiricus (strain DSM

Query: 1 EWCLDDWH 8
+W L DW+
Sbjct: 16 KWKLKDWY 23


>sp|MDH_HALVD|MALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 EWCLDDW 7
EW LDD+
Sbjct: 278 EWDLDDY 284


>sp|PURT_SULAC|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfolobus

Query: 4 LDDWHPS 10
++ WHP+
Sbjct: 237 IESWHPA 243


>sp|FRHG_METVO|COENZYME F420 hydrogenase subunit gamma|Methanococcus voltae

Query: 3 CLDDWH 8
CLDD H
Sbjct: 75 CLDDHH 80


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 LDDWH 8
LD+WH
Sbjct: 244 LDEWH 248


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 LDDWH 8
LD+WH
Sbjct: 244 LDEWH 248


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 2 WCLDD 6
WCLD+
Sbjct: 122 WCLDN 126


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 DDWHP 9
DDW+P
Sbjct: 162 DDWYP 166


>sp|MDH_HALMA|MALATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EWCLDDW 7
EW LDD+
Sbjct: 278 EWDLDDY 284


>sp|RS5_PYRFU|SMALL ribosomal subunit protein uS5|Pyrococcus furiosus (strain ATCC

Query: 4 LDDWHP 9
LD+W P
Sbjct: 13 LDEWEP 18


>sp|FRHG_METJA|COENZYME F420 hydrogenase subunit gamma|Methanocaldococcus jannaschii

Query: 3 CLDDWH 8
CLDD H
Sbjct: 63 CLDDHH 68


>sp|Y208_METBF|UPF0285 protein Mbar_A0208|Methanosarcina barkeri (strain Fusaro /

Query: 3 CLDDWHPS 10
CL WH +
Sbjct: 293 CLGKWHAA 300


>sp|KADA_META3|ADENYLATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EWCLDDWHPS 10
+W LD+ +P+
Sbjct: 107 KWVLDELNPN 116


>sp|SRP54_THEON|SIGNAL recognition particle 54 kDa|Thermococcus onnurineus (strain NA1)

Query: 3 CLDDWHP 9
C D W P
Sbjct: 135 CSDTWRP 141


>sp|SRP54_THEKO|SIGNAL recognition particle 54 kDa|Thermococcus kodakarensis (strain ATCC

Query: 3 CLDDWHP 9
C D W P
Sbjct: 135 CSDTWRP 141


>sp|SRP54_PYRHO|SIGNAL recognition particle 54 kDa|Pyrococcus horikoshii (strain ATCC

Query: 3 CLDDWHP 9
C D W P
Sbjct: 135 CSDTWRP 141


>sp|SRP54_PYRFU|SIGNAL recognition particle 54 kDa|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CLDDWHP 9
C D W P
Sbjct: 135 CSDTWRP 141


>sp|SRP54_PYRAB|SIGNAL recognition particle 54 kDa|Pyrococcus abyssi (strain GE5 /

Query: 3 CLDDWHP 9
C D W P
Sbjct: 135 CSDTWRP 141


>sp|Y1082_METJA|UNCHARACTERIZED protein MJ1082|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EWCLDDWH 8
E LDDW+
Sbjct: 98 EELLDDWY 105


>sp|VORB_PYRHO|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus horikoshii (strain ATCC

Query: 1 EWCLDDW 7
+W L++W
Sbjct: 294 KWVLEEW 300


>sp|VORB_PYRFU|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EWCLDDW 7
+W L++W
Sbjct: 294 KWVLEEW 300


>sp|VORB_PYRAB|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus abyssi (strain GE5 /

Query: 1 EWCLDDW 7
+W L++W
Sbjct: 294 KWVLEEW 300


>sp|TFE_THEKO|TRANSCRIPTION factor E|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WCLDDWHP 9
WC + HP
Sbjct: 116 WCGTEGHP 123




22|Sequence|106|115|DWHPSEKAMY

>sp|XACC_HALVD|PENTONOLACTONASE XacC|Haloferax volcanii (strain ATCC 29605

Query: 2 WHPSEKAMY 10
WHP EK +Y
Sbjct: 19 WHPDEKRLY 27


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 2 WHPSEKAM 9
W PSEK++
Sbjct: 88 WRPSEKSV 95


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 2 WHPSEKA 8
WH EKA
Sbjct: 110 WHEKEKA 116


>sp|PELO_CENSY|PROTEIN pelota homolog|Cenarchaeum symbiosum (strain A)

Query: 1 DWHPSEKAM 9
DW P E+ +
Sbjct: 112 DWGPGERKL 120


>sp|PURT_SACS2|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Saccharolobus

Query: 2 WHPS 5
WHPS
Sbjct: 238 WHPS 241


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 2 WHPSEKAM 9
W P+EK++
Sbjct: 87 WRPTEKSV 94


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 2 WHPSE 6
WHP+E
Sbjct: 74 WHPAE 78


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 WHPSE 6
WHP+E
Sbjct: 430 WHPTE 434


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WHPSE 6
WHP+E
Sbjct: 74 WHPAE 78




23|Sequence|111|120|EKAMYPDYFA

>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EKAMYPDYF 9
+K +YPDY
Sbjct: 409 DKTLYPDYL 417


>sp|SFSA_PYRFU|SUGAR fermentation stimulation protein homolog|Pyrococcus furiosus

Query: 1 EKAMYPD 7
E AMYPD
Sbjct: 140 EYAMYPD 146


>sp|Y120_METJA|UNCHARACTERIZED protein MJ0120|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KAMYPDYFA 10
K M PD+FA
Sbjct: 61 KDMCPDHFA 69


>sp|RS17E_IGNH4|SMALL ribosomal subunit protein eS17|Ignicoccus hospitalis (strain

Query: 4 MYPDYF 9
MYPD F
Sbjct: 19 MYPDLF 24


>sp|HEM1_IGNH4|GLUTAMYL-TRNA reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EKAMYPDYFA 10
EKA +PD A
Sbjct: 30 EKAQFPDPLA 39


>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 1 EKAMYPD 7
++A+YPD
Sbjct: 40 QRALYPD 46


>sp|OGT_PYRHO|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EKAMYPD 7
EK+ YPD
Sbjct: 60 EKSRYPD 66


>sp|TRUD_PYRHO|PROBABLE tRNA pseudouridine synthase D|Pyrococcus horikoshii (strain ATCC

Query: 1 EKAMYPDYFA 10
EK +P+YF
Sbjct: 149 EKGGFPNYFG 158


>sp|CAPPA_SACI2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 YPDYF 9
YPDYF
Sbjct: 69 YPDYF 73


>sp|CAPPA_SACI7|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 YPDYF 9
YPDYF
Sbjct: 69 YPDYF 73


>sp|CAPPA_SACI6|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 YPDYF 9
YPDYF
Sbjct: 69 YPDYF 73


>sp|CAPPA_SACI4|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 YPDYF 9
YPDYF
Sbjct: 69 YPDYF 73


>sp|CAPPA_SACI3|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 YPDYF 9
YPDYF
Sbjct: 69 YPDYF 73


>sp|CAPPA_SACI1|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 YPDYF 9
YPDYF
Sbjct: 69 YPDYF 73


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KAMYPDYF 9
K +YP+YF
Sbjct: 69 KDIYPEYF 76


>sp|CAS7_THETK|CRISPR-ASSOCIATED protein Cas7/Cst2/DevR|Thermoproteus tenax (strain ATCC 35583

Query: 5 YPDYFA 10
YPDY A
Sbjct: 263 YPDYVA 268


>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 1 EKAMYPDYFA 10
EK +P+YF
Sbjct: 155 EKGGFPNYFG 164


>sp|CAPPA_SACS2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 YPDYF 9
YPDYF
Sbjct: 69 YPDYF 73


>sp|TRUD_PYRFU|PROBABLE tRNA pseudouridine synthase D|Pyrococcus furiosus (strain ATCC

Query: 1 EKAMYPDYFA 10
EK +P+YF
Sbjct: 148 EKGGFPNYFG 157


>sp|TRUD_THEKO|PROBABLE tRNA pseudouridine synthase D|Thermococcus kodakarensis (strain

Query: 1 EKAMYPDYFA 10
EK +P+YF
Sbjct: 155 EKGGFPNYFG 164


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AMYPDYFA 10
MYP+Y++
Sbjct: 141 TMYPEYYS 148


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KAMYPD 7
KA+YPD
Sbjct: 130 KALYPD 135


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 YPDYF 9
YPDY+
Sbjct: 37 YPDYY 41


>sp|SFSA_PICTO|SUGAR fermentation stimulation protein homolog|Picrophilus torridus

Query: 1 EKAMYPD 7
+KAM+PD
Sbjct: 136 KKAMFPD 142


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 5 YPDYFA 10
YPDY+
Sbjct: 530 YPDYYG 535




24|Sequence|116|125|PDYFAKREQW

>sp|TDXH_PYRHO|PEROXIREDOXIN horikoshii (strain ATCC 700860

Query: 1 PDYFAKREQW 10
PDYF K+ +W
Sbjct: 23 PDYFTKQGKW 32


>sp|TDXH_THEKO|PEROXIREDOXIN kodakarensis (strain ATCC BAA-918

Query: 1 PDYFAKREQW 10
PDYFA++ +W
Sbjct: 23 PDYFAEQGKW 32


>sp|TDXH_PYRFU|PEROXIREDOXIN furiosus (strain ATCC 43587

Query: 1 PDYFAKREQW 10
PD+F K+ +W
Sbjct: 23 PDHFTKQGKW 32


>sp|TDXH_PYRAB|PEROXIREDOXIN abyssi (strain GE5 /

Query: 1 PDYFAKREQW 10
PD+F K+ +W
Sbjct: 23 PDHFTKQGKW 32


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 PDYFAKREQ 9
PDY A RE+
Sbjct: 445 PDYVAMREK 453


>sp|Y364_METJA|UNCHARACTERIZED protein MJ0364|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DYFAKREQ 9
DYF REQ
Sbjct: 12 DYFKLREQ 19


>sp|Y1569_METJA|PUTATIVE metal transport protein MJ1569|Methanocaldococcus jannaschii

Query: 1 PDYFAKREQ 9
PD F +EQ
Sbjct: 207 PDLFTSKEQ 215


>sp|CDC6_DESA1|ORC1-TYPE DNA replication protein|Desulfurococcus amylolyticus (strain DSM

Query: 2 DYFAKRE 8
DY+ KRE
Sbjct: 153 DYYVKRE 159


>sp|RL15_METM5|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 1 PDYFAK 6
PDYF K
Sbjct: 52 PDYFGK 57


>sp|RL15_METJA|LARGE ribosomal subunit protein uL15|Methanocaldococcus jannaschii

Query: 1 PDYFAK 6
PDYF K
Sbjct: 52 PDYFGK 57


>sp|RL15_METM6|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 1 PDYFAK 6
PDYF K
Sbjct: 52 PDYFGK 57


>sp|RL15_METMP|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 1 PDYFAK 6
PDYF K
Sbjct: 52 PDYFGK 57


>sp|RL15_METM7|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 1 PDYFAK 6
PDYF K
Sbjct: 52 PDYFGK 57


>sp|RL15_METKA|LARGE ribosomal subunit protein uL15|Methanopyrus kandleri (strain AV19

Query: 1 PDYFAKR 7
PD+F KR
Sbjct: 54 PDHFGKR 60


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DYFAKREQW 10
+YF K E W
Sbjct: 457 NYFQKMEPW 465


>sp|MDH_PICTO|MALATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 2 DYFAKRE 8
DYFAK +
Sbjct: 318 DYFAKNQ 324


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 1 PDYFAKRE 8
P Y+A+RE
Sbjct: 303 PQYYAERE 310




25|Sequence|121|130|KREQWKKLRR

>sp|ASPGP_PYRFU|PLANT-TYPE L-asparaginase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KREQWKKLRR 10
+R+QW++LR+
Sbjct: 139 RRKQWEELRK 148


>sp|LIVH_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 5 WKKLRR 10
WKKL+R
Sbjct: 305 WKKLKR 310


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 EQWKKLRR 10
E WK +RR
Sbjct: 242 ETWKSVRR 249


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 KREQWKK 7
KREQ+KK
Sbjct: 381 KREQYKK 387


>sp|ASPGP_PYRAB|PLANT-TYPE L-asparaginase|Pyrococcus abyssi (strain GE5 /

Query: 1 KREQWKKLR 9
+R+QW++L+
Sbjct: 139 RRKQWQELK 147


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 3 EQWKKLRR 10
E WK +RR
Sbjct: 242 ETWKAVRR 249


>sp|HOSA_PYRHO|HOMOCITRATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 REQWKKLRR 10
R +W+ LRR
Sbjct: 136 RTEWENLRR 144


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EQWKKLRR 10
E+W +LRR
Sbjct: 451 EEWNELRR 458


>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 1 KREQWKKLR 9
K+E+W+ L+
Sbjct: 99 KKEEWEALK 107


>sp|ASPGP_THEKO|PLANT-TYPE L-asparaginase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EQWKKLRR 10
+QW++LR+
Sbjct: 141 KQWEELRK 148


>sp|FRHD_METTH|COENZYME F420 hydrogenase subunit delta|Methanothermobacter

Query: 3 EQWKKL 8
E+WKK+
Sbjct: 62 EEWKKM 67


>sp|COBQ_METVS|PROBABLE cobyric acid synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 EQWKKL 8
E WKKL
Sbjct: 184 ENWKKL 189


>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 EQWKKL 8
E WKKL
Sbjct: 184 ENWKKL 189


>sp|MTM6_METJA|TYPE II methyltransferase M.MjaVI|Methanocaldococcus jannaschii (strain

Query: 2 REQWKKLRR 10
+E WKKL +
Sbjct: 151 KESWKKLSK 159


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 EQWKKLRR 10
E+W+KL+R
Sbjct: 38 EEWRKLKR 45


>sp|PRNK_PYRHO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PH0197|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KREQWKK 7
+RE+WK+
Sbjct: 207 RREKWKR 213


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 1 KREQWK 6
K+EQWK
Sbjct: 4 KKEQWK 9


>sp|RL15E_THEVO|LARGE ribosomal subunit protein eL15|Thermoplasma volcanium (strain

Query: 2 REQWKKLRR 10
RE+WK L++
Sbjct: 11 REEWKSLKK 19


>sp|RL15E_PICTO|LARGE ribosomal subunit protein eL15|Picrophilus torridus (strain ATCC

Query: 2 REQWKKLRR 10
R+ WKKL++
Sbjct: 9 RDSWKKLKK 17


>sp|RL15E_THEAC|LARGE ribosomal subunit protein eL15|Thermoplasma acidophilum (strain

Query: 2 REQWKKLRR 10
RE+WK L++
Sbjct: 11 REEWKSLKK 19


>sp|IF2A_SACI6|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain M.16.4

Query: 1 KREQWKKLRR 10
K QWKK++R
Sbjct: 93 KNLQWKKIQR 102


>sp|IF2A_SACI4|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 KREQWKKLRR 10
K QWKK++R
Sbjct: 93 KNLQWKKIQR 102


>sp|IF2A_SACI3|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 KREQWKKLRR 10
K QWKK++R
Sbjct: 93 KNLQWKKIQR 102


>sp|IF2A_SACI7|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 KREQWKKLRR 10
K QWKK++R
Sbjct: 93 KNLQWKKIQR 102


>sp|IF2A_SACI2|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 KREQWKKLRR 10
K QWKK++R
Sbjct: 93 KNLQWKKIQR 102


>sp|IF2A_SACI1|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 KREQWKKLRR 10
K QWKK++R
Sbjct: 93 KNLQWKKIQR 102


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 EQWKKLR 9
E+W+KLR
Sbjct: 206 EEWRKLR 212


>sp|IF2A_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 4 QWKKLRR 10
QWKK++R
Sbjct: 96 QWKKIQR 102




26|Sequence|126|135|KKLRRESWER

>sp|EHAA_METKA|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex membrane|Methanopyrus

Query: 2 KLRRESWE 9
K RR+SWE
Sbjct: 32 KPRRKSWE 39


>sp|PRNK_PYRHO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PH0197|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KKLRRESWER 10
K+LRRE W+R
Sbjct: 204 KELRREKWKR 213


>sp|COXX_SULTO|PROTOHEME IX farnesyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KKLRRESW 8
KK++R SW
Sbjct: 86 KKMKRTSW 93


>sp|DPCKG_AERPE|GTP-DEPENDENT dephospho-CoA kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KLRRESW 8
K RRESW
Sbjct: 75 KTRRESW 81


>sp|TKSP_THEKO|SUBTILISIN-LIKE serine protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KKLRRESWER 10
KK++R SW++
Sbjct: 48 KKVQRMSWDQ 57


>sp|EF1A_METJA|ELONGATION factor 1-alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKLRRESWER 10
+KL+RE+ ER
Sbjct: 40 EKLKREAQER 49


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 4 RRESW 8
RRESW
Sbjct: 519 RRESW 523


>sp|MFNA_METM7|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 2 KLRRESW 8
KLR E+W
Sbjct: 341 KLREENW 347


>sp|MFNA_METM5|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 2 KLRRESW 8
KLR E+W
Sbjct: 341 KLREENW 347


>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 1 KKLRRESWE 9
KK+ RE+W+
Sbjct: 47 KKMGRETWK 55


>sp|Y1844_ARCFU|UNCHARACTERIZED protein AF_1844|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KLRRESWE 9
KL+ E WE
Sbjct: 43 KLKSEGWE 50


>sp|Y1657_METJA|UNCHARACTERIZED protease MJ1657|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKLRRESWE 9
KKL++ES+E
Sbjct: 28 KKLKKESFE 36


>sp|RL37_METST|LARGE ribosomal subunit protein eL37|Methanosphaera stadtmanae (strain

Query: 1 KKLRRESWE 9
K+LRR SW+
Sbjct: 42 KRLRRYSWQ 50


>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 LRRESWE 9
LRR++WE
Sbjct: 346 LRRKAWE 352


>sp|KHSE_META3|HOMOSERINE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KKLRRESWE 9
KK+ +E+W+
Sbjct: 285 KKIFKETWD 293


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 KKLRRESWE 9
K++RR WE
Sbjct: 237 KEIRRRVWE 245


>sp|AROC_THEKO|CHORISMATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LRRESWE 9
LRR +WE
Sbjct: 345 LRRRAWE 351


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KKLRRESWE 9
K++RR +WE
Sbjct: 396 KEIRRINWE 404


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KKLRRESWE 9
++LRRE WE
Sbjct: 283 EELRREIWE 291


>sp|RL37_IGNH4|LARGE ribosomal subunit protein eL37|Ignicoccus hospitalis (strain

Query: 1 KKLRRESWE 9
K++RR SW+
Sbjct: 44 KRMRRYSWQ 52


>sp|NTPTH_PYRIL|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum islandicum (strain DSM 4184

Query: 3 LRRESWE 9
L RE+WE
Sbjct: 154 LTRENWE 160




27|Sequence|131|140|ESWEREVKQL

>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 ESWEREV 7
ESWE+EV
Sbjct: 283 ESWEKEV 289


>sp|RS8_THEPD|SMALL ribosomal subunit protein uS8|Thermofilum pendens (strain DSM

Query: 1 ESWERE 6
E+WERE
Sbjct: 86 EAWERE 91


>sp|HIS6_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 2 SWEREVKQL 10
SW +EV++L
Sbjct: 155 SWAKEVEKL 163


>sp|IF2P_META3|PROBABLE translation initiation factor IF-2|Methanococcus aeolicus (strain

Query: 1 ESWEREVKQL 10
E W +E+K+L
Sbjct: 446 EEWTKEMKEL 455


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 ESWEREVKQL 10
E +EREVK+L
Sbjct: 109 EKFEREVKEL 118


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 1 ESWEREVKQL 10
++W E+K+L
Sbjct: 462 KAWTHEIKEL 471


>sp|SUDHB_PYRFU|SULFIDE dehydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ESWERE 6
E WERE
Sbjct: 269 EKWERE 274


>sp|ENO_PYRHO|ENOLASE horikoshii (strain ATCC 700860

Query: 3 WEREVKQL 10
W+RE+ +L
Sbjct: 87 WQREIDKL 94


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 ESWEREVKQ 9
+SWE+E+ +
Sbjct: 539 DSWEKELPE 547


>sp|HJC_METJA|CROSSOVER junction endodeoxyribonuclease Hjc|Methanocaldococcus jannaschii

Query: 2 SWEREVKQL 10
S+ERE+K+L
Sbjct: 10 SFERELKRL 18


>sp|ENO_PYRAB|ENOLASE abyssi (strain GE5 /

Query: 3 WEREVKQL 10
W+RE+ +L
Sbjct: 87 WQREIDRL 94


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ESWEREVKQL 10
E WER+V +
Sbjct: 15 EEWERDVAAM 24


>sp|Y2362_ARCFU|UNCHARACTERIZED protein AF_2362|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WEREVKQL 10
+EREVK+L
Sbjct: 6 FEREVKEL 13


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 2 SWEREVKQL 10
SW R+VK L
Sbjct: 134 SWIRDVKML 142


>sp|NTPTH_PYRIL|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ESWEREVKQL 10
E+WE KQ+
Sbjct: 157 ENWEMTYKQV 166


>sp|CPKA_PYRAB|CARBAMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 ESWEREVK 8
E+W REVK
Sbjct: 249 ETWLREVK 256


>sp|NDK_HYPBU|NUCLEOSIDE diphosphate kinase|Hyperthermus butylicus (strain DSM 5456

Query: 1 ESWEREVK 8
ES+ERE K
Sbjct: 123 ESYEREYK 130




28|Sequence|136|145|EVKQLQEETP

>sp|TRPC_METTH|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 EVKQLQEETP 10
EVK+L ++TP
Sbjct: 12 EVKELMKKTP 21


>sp|COFH2_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanococcus maripaludis (strain DSM

Query: 2 VKQLQEET 9
+K+LQEET
Sbjct: 230 LKELQEET 237




29|Sequence|141|150|QEETPPGGPL

>sp|Y2425_METAR|PROTEIN UNCMA_24250|Methanocella arvoryzae (strain DSM 22066

Query: 2 EETPPGGPL 10
EET PGGP+
Sbjct: 184 EETEPGGPV 192


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 TPPGGP 9
TPPG P
Sbjct: 44 TPPGDP 49


>sp|TFE_AERPE|TRANSCRIPTION factor E|Aeropyrum pernix (strain ATCC 700893

Query: 2 EETPPGG 8
EETP GG
Sbjct: 40 EETPNGG 46


>sp|SERA_METTH|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 QEETPPGGPL 10
+EE P G PL
Sbjct: 259 EEEPPEGSPL 268


>sp|NOB1_PYRAB|ENDORIBONUCLEASE Nob1|Pyrococcus abyssi (strain GE5 /

Query: 2 EETPPGG 8
+E PPGG
Sbjct: 137 KEMPPGG 143


>sp|SRP54_PYRAE|SIGNAL recognition particle 54 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 1 QEETPPGG 8
+EE PP G
Sbjct: 59 KEEKPPAG 66


>sp|SRP54_PYRCJ|SIGNAL recognition particle 54 kDa|Pyrobaculum calidifontis (strain DSM

Query: 1 QEETPPGG 8
+EE PP G
Sbjct: 58 REEKPPAG 65


>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 1 QEETPPG 7
+EE PPG
Sbjct: 62 KEEVPPG 68


>sp|SRP54_PYRIL|SIGNAL recognition particle 54 kDa|Pyrobaculum islandicum (strain DSM

Query: 1 QEETPPGG 8
+EE PP G
Sbjct: 59 REEKPPAG 66


>sp|SRP54_PYRAR|SIGNAL recognition particle 54 kDa|Pyrobaculum arsenaticum (strain DSM

Query: 1 QEETPPGG 8
+EE PP G
Sbjct: 59 REEKPPAG 66


>sp|SRP54_HALSA|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 2 EETPPGG 8
EE PPGG
Sbjct: 62 EEEPPGG 68


>sp|SRP54_HALS3|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 2 EETPPGG 8
EE PPGG
Sbjct: 62 EEEPPGG 68


>sp|SRP54_HALLT|SIGNAL recognition particle 54 kDa|Halorubrum lacusprofundi (strain ATCC

Query: 2 EETPPGG 8
EE PPGG
Sbjct: 62 EEEPPGG 68


>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 1 QEETPPGG 8
+EE PP G
Sbjct: 59 KEEKPPAG 66


>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 2 EETPPGG 8
EE PPGG
Sbjct: 62 EEEPPGG 68


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 3 ETPPGGPL 10
ET P GPL
Sbjct: 286 ETDPNGPL 293


>sp|SRP54_STAMF|SIGNAL recognition particle 54 kDa|Staphylothermus marinus (strain ATCC

Query: 1 QEETPPG 7
+EE PPG
Sbjct: 58 KEEPPPG 64


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PPGGPL 10
PPG PL
Sbjct: 935 PPGSPL 940


>sp|SRP54_AERPE|SIGNAL recognition particle 54 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 1 QEETPPG 7
+EE PPG
Sbjct: 57 KEEPPPG 63


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EETPPGG 8
+ET PGG
Sbjct: 208 QETSPGG 214


>sp|Y1334_METJA|PUTATIVE UTP--glucose-1-phosphate uridylyltransferase|Methanocaldococcus

Query: 3 ETPPG 7
ETPPG
Sbjct: 215 ETPPG 219


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 EETPPGG 8
E+TP GG
Sbjct: 234 EQTPDGG 240


>sp|FTR_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 EETPPGGP 9
EETP G P
Sbjct: 63 EETPDGRP 70




30|Sequence|146|155|PGGPLTEALP

>sp|KAE1_METAR|TRNA N6-adenosine threonylcarbamoyltransferase|Methanocella arvoryzae

Query: 1 PGGPLTEAL 9
PGGP EAL
Sbjct: 170 PGGPKIEAL 178


>sp|TRUD_PYRHO|PROBABLE tRNA pseudouridine synthase D|Pyrococcus horikoshii (strain ATCC

Query: 2 GGPLTEALP 10
G PL EALP
Sbjct: 273 GFPLNEALP 281


>sp|Y1455_METJA|UNCHARACTERIZED protein MJ1455|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGGPLTEAL 9
P PLTEAL
Sbjct: 229 PVEPLTEAL 237


>sp|TRUD_PYRAB|PROBABLE tRNA pseudouridine synthase D|Pyrococcus abyssi (strain GE5 /

Query: 2 GGPLTEALP 10
G PL EA+P
Sbjct: 271 GLPLNEAIP 279


>sp|TF2B_PYROC|TRANSCRIPTION initiation factor IIB|Pyrodictium occultum

Query: 2 GGPLTEALP 10
G PLT LP
Sbjct: 66 GSPLTHTLP 74


>sp|AROA_HALLT|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 PGGPLTEAL 9
P GPL EAL
Sbjct: 126 PQGPLLEAL 134


>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 GGPLTEALP 10
GGP+T LP
Sbjct: 168 GGPITYNLP 176




31|Sequence|151|160|TEALPPARKE

>sp|GPN_PYRAB|GPN-LOOP GTPase PAB0955|Pyrococcus abyssi (strain GE5 /

Query: 1 TEALPPAR 8
TE LPP R
Sbjct: 211 TEVLPPVR 218


>sp|PGK_HALSA|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TEALPPARKE 10
T+ALPPA E
Sbjct: 290 TDALPPAGDE 299


>sp|PGK_HALS3|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 TEALPPARKE 10
T+ALPPA E
Sbjct: 290 TDALPPAGDE 299


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 2 EALPPAR 8
EALPP R
Sbjct: 391 EALPPVR 397


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TEALPPARKE 10
T A PP R E
Sbjct: 357 TRAFPPGRSE 366


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 1 TEALPPARK 9
+EALP A+K
Sbjct: 335 SEALPKAKK 343


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 1 TEALPPARK 9
T+ALPP K
Sbjct: 575 TQALPPEYK 583


>sp|SPEH_AERPE|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 EALPPARKE 10
EAL PAR E
Sbjct: 113 EALKPARVE 121


>sp|Y1002_PYRHO|UPF0282 protein PH1002|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 ALPPARKE 10
ALPPA+ E
Sbjct: 41 ALPPAQAE 48




32|Sequence|156|165|PARKEGDLPP

>sp|GFCR_THEVO|TRANSCRIPTIONAL regulator GfcR|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PARKEG 6
PARKEG
Sbjct: 120 PARKEG 125


>sp|GFCR_THEAC|TRANSCRIPTIONAL regulator GfcR|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PARKEG 6
PARKEG
Sbjct: 120 PARKEG 125


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 5 EGDLPP 10
EGDLPP
Sbjct: 560 EGDLPP 565


>sp|FEN_METHJ|FLAP endonuclease 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ARKEGDL 8
A+KEGDL
Sbjct: 109 AKKEGDL 115


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ARKEGDL 8
ARK+GDL
Sbjct: 279 ARKDGDL 285


>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 3 RKEGDLPP 10
+KEG+ PP
Sbjct: 356 KKEGETPP 363


>sp|GVPJ1_HALSA|GAS vesicle protein J1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PARKEGDL 8
P R +GDL
Sbjct: 6 PTRSQGDL 13


>sp|GVPJ_HALMT|GAS vesicle protein J|Haloferax mediterranei (strain ATCC 33500

Query: 1 PARKEGDL 8
P R +GDL
Sbjct: 6 PTRSQGDL 13




33|Sequence|161|170|GDLPPLWWYI

>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 1 GDLPPLW 7
G LPP+W
Sbjct: 316 GQLPPVW 322


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 GDLPPLW 7
G LPP+W
Sbjct: 316 GQLPPVW 322


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GDLPPLWWYI 10
GD P WW I
Sbjct: 86 GDKKPGWWEI 95


>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GDLPPLWWYI 10
GD P WW I
Sbjct: 68 GDKKPGWWNI 77


>sp|Y452_PYRAB|UNCHARACTERIZED lipoprotein PYRAB04520|Pyrococcus abyssi (strain GE5 /

Query: 2 DLPPLW 7
D+PPLW
Sbjct: 172 DIPPLW 177


>sp|Y1695_PYRFU|UNCHARACTERIZED lipoprotein PF1695|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DLPPLW 7
D+PPLW
Sbjct: 169 DIPPLW 174


>sp|Y1714_PYRHO|UNCHARACTERIZED lipoprotein PH1714|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DLPPLW 7
D+PPLW
Sbjct: 173 DIPPLW 178


>sp|CBIM_METST|PUTATIVE cobalt transport protein CbiM|Methanosphaera stadtmanae (strain

Query: 1 GDLPPLWWYI 10
G LPPLW I
Sbjct: 6 GFLPPLWCLI 15


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 GDLPPLWW 8
GD P WW
Sbjct: 65 GDTKPGWW 72


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 GDLPPLWWYI 10
GD P WW I
Sbjct: 67 GDKKPGWWDI 76


>sp|RS19E_METTH|SMALL ribosomal subunit protein eS19|Methanothermobacter

Query: 5 PLWWYI 10
P WWY+
Sbjct: 48 PDWWYV 53


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 1 GDLPPLWWYI 10
GD P WW I
Sbjct: 67 GDRKPGWWDI 76


>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 GDLPPLW 7
G LPP W
Sbjct: 318 GSLPPTW 324


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 GDLPPLW 7
G LPP W
Sbjct: 318 GSLPPTW 324


>sp|Y488_METKA|PROTEIN MK0488|Methanopyrus kandleri (strain AV19 /

Query: 3 LPPLWW 8
LPP WW
Sbjct: 169 LPPDWW 174


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 1 GDLPPLWWYI 10
GD P WW I
Sbjct: 67 GDNKPGWWDI 76


>sp|DIPPS_PYRFU|BIFUNCTIONAL IPC transferase and DIPP|Pyrococcus furiosus (strain ATCC 43587

Query: 5 PLWWYI 10
P+WW I
Sbjct: 341 PIWWVI 346


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 1 GDLPPLW 7
GD+P +W
Sbjct: 340 GDIPKMW 346


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DLPPLWWYI 10
DLPP +YI
Sbjct: 521 DLPPTHYYI 529


>sp|TRUB_PYRNV|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum neutrophilum (strain DSM

Query: 1 GDLPPLW 7
G PPLW
Sbjct: 316 GTYPPLW 322


>sp|RS15_IGNH4|SMALL ribosomal subunit protein uS15|Ignicoccus hospitalis (strain KIN4/I

Query: 1 GDLPPLWWY 9
G LPP W Y
Sbjct: 131 GKLPPDWKY 139


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 1 GDLPPLWW 8
GD PP W
Sbjct: 369 GDAPPFRW 376


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDLPPL 6
GD+PPL
Sbjct: 520 GDVPPL 525


>sp|Y1519_METMJ|UPF0280 protein Memar_1519|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GDLPPL 6
GDLPP+
Sbjct: 216 GDLPPI 221


>sp|LYSK_PYRHO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus horikoshii

Query: 1 GDLPPLWWYI 10
G +PPL W I
Sbjct: 224 GYVPPLEWDI 233


>sp|Y2179_THEKO|UNCHARACTERIZED protein TK2179|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DLPPLWWY 9
+LP LW Y
Sbjct: 214 NLPELWKY 221


>sp|RS12_THEPD|SMALL ribosomal subunit protein uS12|Thermofilum pendens (strain DSM 2475

Query: 1 GDLPPLWWYI 10
GDLP + W +
Sbjct: 117 GDLPGVRWKV 126


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GDLPP 5
GDLPP
Sbjct: 561 GDLPP 565


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 DLPPLWWY 9
D+ LWW+
Sbjct: 169 DINDLWWF 176


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GDLPPLW 7
GDL P W
Sbjct: 47 GDLKPPW 53


>sp|SRP19_METTH|SIGNAL recognition particle 19 kDa|Methanothermobacter

Query: 4 PPLWW 8
PP WW
Sbjct: 56 PPSWW 60


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 2 DLPPLWWY 9
DLP +W Y
Sbjct: 43 DLPGMWRY 50


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 DLPPLWWY 9
D+ LWW+
Sbjct: 169 DINDLWWF 176


>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DLPPLWWY 9
D+ LWW+
Sbjct: 169 DINDLWWF 176


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 3 LPPLWWY 9
LPP+W +
Sbjct: 171 LPPMWAF 177


>sp|HEM3_AERPE|PROBABLE porphobilinogen deaminase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DLPPLWWYI 10
D PP WW++
Sbjct: 218 DKPP-WWHV 225


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 3 LPPLWWY 9
LPP+W +
Sbjct: 171 LPPMWAF 177


>sp|AOR_THEKO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Thermococcus kodakarensis

Query: 1 GDLPPLWW 8
GD PP W
Sbjct: 369 GDAPPFRW 376


>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GDLPPLWWY 9
D+P +W Y
Sbjct: 41 ADMPGMWRY 49


>sp|Y1382_METTH|UNCHARACTERIZED transporter MTH_1382|Methanothermobacter thermautotrophicus (strain

Query: 3 LPPLWWYI 10
PPLW ++
Sbjct: 165 FPPLWAFL 172


>sp|RS15_THEPD|SMALL ribosomal subunit protein uS15|Thermofilum pendens (strain DSM 2475

Query: 1 GDLPPLWWY 9
G LPP W Y
Sbjct: 131 GILPPDWKY 139


>sp|RS15_STAMF|SMALL ribosomal subunit protein uS15|Staphylothermus marinus (strain ATCC

Query: 1 GDLPPLWWY 9
G LPP W Y
Sbjct: 133 GRLPPDWKY 141


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PPLWWYI 10
PP W Y+
Sbjct: 307 PPFWMYV 313


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 LPPLWWY 9
+PP W Y
Sbjct: 663 MPPFWNY 669


>sp|RS4E_PYRAE|SMALL ribosomal subunit protein eS4|Pyrobaculum aerophilum (strain ATCC

Query: 3 LPPLWWYI 10
L P WW I
Sbjct: 8 LAPAWWPI 15


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 1 GDLPP 5
GDLPP
Sbjct: 509 GDLPP 513


>sp|RS4E_PYRCJ|SMALL ribosomal subunit protein eS4|Pyrobaculum calidifontis (strain

Query: 3 LPPLWWYI 10
L P WW I
Sbjct: 8 LAPYWWPI 15


>sp|SRP19_PYRAR|SIGNAL recognition particle 19 kDa|Pyrobaculum arsenaticum (strain DSM

Query: 4 PPLWW 8
PPLW+
Sbjct: 60 PPLWY 64


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DLPPLWWY 9
D+ +WW+
Sbjct: 169 DINEMWWF 176


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 PPLWWYI 10
PP W Y+
Sbjct: 307 PPFWMYL 313


>sp|SRP19_AERPE|SIGNAL recognition particle 19 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 4 PPLWWYI 10
P LWW +
Sbjct: 70 PRLWWRV 76


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 DLPPLWWY 9
D+ +WW+
Sbjct: 169 DINEMWWF 176


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DLPPLWWY 9
D+ +WW+
Sbjct: 169 DINEMWWF 176


>sp|CBIM_METJA|PUTATIVE cobalt transport protein CbiM|Methanocaldococcus jannaschii

Query: 1 GDLPPLWWYI 10
G LPP+W +
Sbjct: 6 GYLPPMWCAV 15




34|Sequence|166|179|LWWYIVTRPRERPM

>sp|AGLD_HALVD|GLYCOSYLTRANSFERASE AglD|Haloferax volcanii (strain ATCC 29605

Query: 2 WWYIVTRPR 10
WW + RPR
Sbjct: 247 WWQLTVRPR 255


>sp|HEM4_METJA|PUTATIVE uroporphyrinogen-III synthase|Methanocaldococcus jannaschii

Query: 5 IVTRPRER 12
++TRP+ER
Sbjct: 4 VITRPKER 11


>sp|RS3A_SULAC|SMALL ribosomal subunit protein eS1|Sulfolobus acidocaldarius (strain

Query: 3 WYIVTRPR 10
WY++T P+
Sbjct: 18 WYVITAPK 25


>sp|SECY_SACS2|PROTEIN translocase subunit SecY|Saccharolobus solfataricus (strain ATCC

Query: 6 VTRPRERP 13
VT+P+E+P
Sbjct: 17 VTKPKEKP 24


>sp|MPTA_METB6|GTP cyclohydrolase MptA|Methanoregula boonei (strain DSM 21154

Query: 6 VTRPRERPM 14
VTRP +RP+
Sbjct: 41 VTRPDKRPV 49


>sp|MPTA_METHJ|GTP cyclohydrolase MptA|Methanospirillum hungatei JF-1 (strain ATCC

Query: 6 VTRPRERPM 14
VTRP +RP+
Sbjct: 43 VTRPGKRPV 51


>sp|DGGGP_HALSA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 WWYIV 6
WWY+V
Sbjct: 226 WWYLV 230


>sp|DGGGP_HALS3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 WWYIV 6
WWY+V
Sbjct: 226 WWYLV 230


>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain

Query: 8 RPRERPM 14
RP+ERP+
Sbjct: 22 RPQERPI 28


>sp|UREND_METTH|DNA uridine endonuclease|Methanothermobacter thermautotrophicus (strain

Query: 2 WWYIVTRPRERPM 14
WW TR RER +
Sbjct: 205 WWSYRTRARERNV 217


>sp|SYP_HALLT|PROLINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 YIVTRPR 10
+IVTRPR
Sbjct: 42 FIVTRPR 48


>sp|SYP_HALSA|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 YIVTRPR 10
+IVTRPR
Sbjct: 40 FIVTRPR 46


>sp|SYP_HALS3|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 YIVTRPR 10
+IVTRPR
Sbjct: 40 FIVTRPR 46


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 YIVTRPR 10
+IVTRPR
Sbjct: 39 FIVTRPR 45


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 YIVTRPR 10
+IVTRPR
Sbjct: 41 FIVTRPR 47


>sp|FTRL_METKA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanopyrus kandleri (strain AV19

Query: 4 YIVTRPRERPM 14
+IVT ERP+
Sbjct: 24 FIVTAADERPL 34


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 YIVTRPR 10
+IVTRPR
Sbjct: 38 FIVTRPR 44


>sp|RS3A_HALSA|SMALL ribosomal subunit protein eS1|Halobacterium salinarum (strain

Query: 3 WYIVTRPRE 11
WY V P E
Sbjct: 15 WYTVLAPEE 23


>sp|RS3A_HALS3|SMALL ribosomal subunit protein eS1|Halobacterium salinarum (strain

Query: 3 WYIVTRPRE 11
WY V P E
Sbjct: 15 WYTVLAPEE 23


>sp|Y1266_ARCFU|UNCHARACTERIZED protein AF_1266|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LWWYIVTR 8
L+W+ VTR
Sbjct: 112 LYWWFVTR 119


>sp|LEU3_METTH|3-ISOPROPYLMALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 YIVTRPRE 11
Y++T+P+E
Sbjct: 205 YLITQPQE 212


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 3 WYIVTRPRERP 13
WY VT E P
Sbjct: 97 WYSVTVTPEHP 107






THE END