NDUB8_HUMAN Blast OutputR
Viruses
1|SequenceR|10|1|GLVGARAVAM

***** No hits found ******


2|SequenceR|15|6|QLWQVGLVGA

>sp|Y115_AFV2P|UNCHARACTERIZED protein ORF115|Acidianus filamentous virus 2 (isolate

Query: 1 QLWQVGLVGA 10
Q W VGL+ A
Sbjct: 41 QQWAVGLIVA 50


>sp|CAPSD_BPPAJ|CAPSID polyprotein|Pseudomonas phage PAJU2

Query: 2 LWQVGLVG 9
LWQ LVG
Sbjct: 632 LWQRNLVG 639




3|SequenceR|20|11|NRSARQLWQV

>sp|U24A_HHV6Z|UNCHARACTERIZED protein U24A|Human herpesvirus 6B (strain Z29)

Query: 2 RSARQLWQ 9
RSA +LW+
Sbjct: 13 RSAEELWE 20


>sp|NS1_JDNVP|INITIATOR protein NS1|Junonia coenia densovirus (isolate pBRJ/1990)

Query: 1 NRSARQLW 8
NRS R +W
Sbjct: 145 NRSCRDIW 152


>sp|RIR1_FRG3G|PUTATIVE ribonucleoside-diphosphate reductase large subunit|Frog virus 3

Query: 3 SARQLWQ 9
SAR+LW+
Sbjct: 211 SARELWE 217


>sp|NS1_DSDNV|INITIATOR protein NS1|Diatraea saccharalis densovirus (DsDNV)

Query: 1 NRSARQLW 8
NRS R +W
Sbjct: 145 NRSCRDIW 152




4|SequenceR|25|16|GLPMVNRSAR

>sp|NS1A_ANV1|NON-STRUCTURAL polyprotein 1A|Avian nephritis virus 1 (ANV-1)

Query: 1 GLPMVNRSAR 10
G P++NR R
Sbjct: 622 GSPIINRDGR 631


>sp|NS1AB_ANV1|NON-STRUCTURAL polyprotein 1AB|Avian nephritis virus 1 (ANV-1)

Query: 1 GLPMVNRSAR 10
G P++NR R
Sbjct: 622 GSPIINRDGR 631


>sp|GN_PSHV1|ENVELOPE glycoprotein N|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 GLPMVNRS 8
GLP+VN S
Sbjct: 70 GLPLVNES 77


>sp|RAF_MSV36|SERINE/THREONINE-PROTEIN kinase-transforming protein raf|Murine sarcoma virus 3611

Query: 2 LPMVNRSA 9
LP +NRSA
Sbjct: 288 LPKINRSA 295


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 3 PMVNRSAR 10
P+V+RSAR
Sbjct: 415 PLVSRSAR 422


>sp|MIL_AVIMH|SERINE/THREONINE-PROTEIN kinase-transforming protein mil|Avian retrovirus MH2

Query: 2 LPMVNRSA 9
LP +NRSA
Sbjct: 346 LPKINRSA 353


>sp|PORTL_BPKMV|PORTAL protein|Pseudomonas phage phiKMV

Query: 1 GLPMVNRSA 9
GLP ++RSA
Sbjct: 415 GLPALSRSA 423


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1 GLPMVNRSAR 10
G P+VNRS
Sbjct: 1623 GSPIVNRSGE 1632


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1 GLPMVNRSAR 10
G P+VNRS
Sbjct: 1623 GSPIVNRSGE 1632


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 3 PMVNRSAR 10
P+V RSAR
Sbjct: 422 PLVRRSAR 429




5|SequenceR|30|21|SATRAGLPMV

>sp|MVP_TBSVB|MOVEMENT protein|Tomato bushy stunt virus (strain

Query: 2 ATRAGLPMV 10
+TR+G+P+V
Sbjct: 116 STRSGVPIV 124


>sp|EGT_NPVAC|ECDYSTEROID UDP-glucosyltransferase|Autographa californica nuclear polyhedrosis

Query: 2 ATRAGLPMV 10
A AG+PMV
Sbjct: 376 ALEAGIPMV 384


>sp|POL2_RRVS|RNA2 polyprotein|Raspberry ringspot virus (strain S)

Query: 2 ATRAGLP 8
ATR GLP
Sbjct: 1063 ATRVGLP 1069


>sp|VG61_BPML5|GENE 61 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 SATRAGLPMV 10
A RAG+P++
Sbjct: 110 EAERAGIPVI 119




6|SequenceR|35|26|DKTMHSATRA

>sp|CAPSD_LRVLG|MAJOR capsid protein|Leishmania RNA virus 1 -

Query: 2 KTMHSATR 9
+ MHSATR
Sbjct: 360 QMMHSATR 367




7|SequenceR|40|31|PGPFMDKTMH

>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2 GPFMDKTMH 10
G FMDK +H
Sbjct: 3433 GAFMDKQVH 3441


Query: 2 GPFMDKTMH 10
GPFMD ++
Sbjct: 536 GPFMDNAIN 544


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 GPFMDKTMH 10
G FMDK +H
Sbjct: 3433 GAFMDKQVH 3441


Query: 2 GPFMDKTMH 10
GPFMD ++
Sbjct: 536 GPFMDNAIN 544


>sp|PORTL_BPT5|PORTAL protein|Escherichia phage T5 (Enterobacteria phage

Query: 1 PGPFMD 6
P PFMD
Sbjct: 89 PNPFMD 94


>sp|ENV_FSVSM|ENVELOPE glycoprotein|Feline sarcoma virus (strain SM)

Query: 1 PGPFMDKT 8
P PF DKT
Sbjct: 7 PKPFKDKT 14


>sp|VG26_ICHVA|UNCHARACTERIZED protein ORF26|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 PFMDKTMH 10
PF+D T+H
Sbjct: 43 PFVDSTVH 50


>sp|SPIKE_ADES1|FIBER protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 PGPFMDKTMH 10
P PF+D+ H
Sbjct: 356 PVPFIDRASH 365




8|SequenceR|45|36|PTRPYPGPFM

>sp|DPOL_BPR69|DNA-DIRECTED DNA polymerase|Escherichia phage RB69 (Bacteriophage RB69)

Query: 1 PTRPYPGPFM 10
P +PYPG F+
Sbjct: 387 PVQPYPGAFV 396


>sp|V022_FOWPN|PUTATIVE ankyrin repeat protein FPV022|Fowlpox virus (strain NVSL) (FPV)

Query: 1 PTRPYPG 7
P+ PYPG
Sbjct: 125 PSGPYPG 131


>sp|TRM1_EHV2|TRIPARTITE terminase subunit 1|Equine herpesvirus 2 (strain 86/87)

Query: 1 PTRPYPGP 8
P+RP GP
Sbjct: 101 PSRPLEGP 108


>sp|COMPL_BPT5|TAIL completion protein p143|Escherichia phage T5 (Enterobacteria phage

Query: 3 RPYPG 7
RPYPG
Sbjct: 219 RPYPG 223


>sp|VE6_MMPV|PROTEIN E6|Micromys minutus papillomavirus (MmPV) (Old

Query: 1 PTRPY 5
PTRPY
Sbjct: 4 PTRPY 8


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1 PTRPYPGP 8
PT+P P P
Sbjct: 1753 PTKPIPAP 1760


>sp|RDRP_OCSVU|RNA-DIRECTED RNA polymerase|Oat chlorotic stunt virus (isolate

Query: 1 PTRPYPGPF 9
P RP PG F
Sbjct: 296 PPRPAPGVF 304


>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 PTRPYPGPFM 10
P+RP GP++
Sbjct: 350 PSRPQSGPWL 359


>sp|X_HBVG3|PROTEIN X|Hepatitis B virus genotype G

Query: 3 RPYPGPF 9
RP PGPF
Sbjct: 28 RPLPGPF 34


>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 PTRPYPGPFM 10
P+RP GP++
Sbjct: 351 PSRPQSGPWL 360


>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 3 RPYPGPF 9
R +PGPF
Sbjct: 1374 RDFPGPF 1380


>sp|CAPSD_FBNY1|CAPSID protein|Faba bean necrotic yellows virus

Query: 1 PTRPYPGPF 9
P RPY P+
Sbjct: 16 PRRPYGRPY 24


>sp|CAPSD_FBNY2|CAPSID protein|Faba bean necrotic yellows virus

Query: 1 PTRPYPGPF 9
P RPY P+
Sbjct: 16 PRRPYGRPY 24


>sp|MATA_BPGA|MATURATION protein A|Enterobacteria phage GA (Bacteriophage GA)

Query: 5 YPGPF 9
YPGPF
Sbjct: 110 YPGPF 114


>sp|X_HBVD7|PROTEIN X|Hepatitis B virus genotype D

Query: 3 RPYPGPF 9
RP+ GPF
Sbjct: 28 RPFSGPF 34


>sp|X_HBVB4|PROTEIN X|Hepatitis B virus genotype B/C

Query: 3 RPYPGPF 9
RP+PGP
Sbjct: 28 RPFPGPL 34


>sp|REP_TYCSV|REPLICATION-ASSOCIATED protein|Tomato yellow leaf curl Sardinia

Query: 1 PTRPYPGPFM 10
P PY PF+
Sbjct: 176 PPAPYVSPFL 185




9|SequenceR|50|41|AAREEPTRPY

>sp|VE6_MMPV|PROTEIN E6|Micromys minutus papillomavirus (MmPV) (Old

Query: 5 EPTRPY 10
+PTRPY
Sbjct: 3 QPTRPY 8


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 1 AAREEPTRP 9
AAR+EPT P
Sbjct: 1782 AARKEPTPP 1790


>sp|YR545_MIMIV|HMG box-containing protein R545|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 EEPTRPY 10
EEP +PY
Sbjct: 204 EEPGKPY 210




10|SequenceR|55|46|YKKAAAAREE

***** No hits found ******


11|SequenceR|60|51|EVRMNYKKAA

***** No hits found ******


12|SequenceR|65|56|YPEYDEVRMN

>sp|TEG7_VZVO|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 PEYDEVRMN 10
P Y+EVR+N
Sbjct: 19 PSYEEVRVN 27


>sp|TEG7_VZVD|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Dumas)

Query: 2 PEYDEVRMN 10
P Y+EVR+N
Sbjct: 19 PSYEEVRVN 27


>sp|VP4_APRVF|PUTATIVE non-structural protein 4|Aedes pseudoscutellaris reovirus (isolate

Query: 1 YPEYDEVRM 9
+PEY+E+R+
Sbjct: 618 FPEYNELRL 626


>sp|YL115_MIMIV|PUTATIVE helicase L115|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YPEYDE 6
YPEYD+
Sbjct: 164 YPEYDQ 169


>sp|CAPSD_CAMVE|CAPSID protein|Cauliflower mosaic virus (strain BBC)

Query: 2 PEYDEVRMN 10
PE+++VRM+
Sbjct: 91 PEFEQVRMD 99


>sp|NRAM_I66A1|NEURAMINIDASE A virus (strain A/Turkey/Wisconsin/1/1966

Query: 1 YPEYDEVR 8
YP Y +VR
Sbjct: 281 YPRYPDVR 288


>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann

Query: 1 YPEYDEVR 8
YP Y +VR
Sbjct: 281 YPRYPDVR 288


>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957

Query: 1 YPEYDEVR 8
YP Y +VR
Sbjct: 281 YPRYPDVR 288


>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957

Query: 1 YPEYDEVR 8
YP Y +VR
Sbjct: 281 YPRYPDVR 288


>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957

Query: 1 YPEYDEVR 8
YP Y +VR
Sbjct: 281 YPRYPDVR 288


>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957

Query: 1 YPEYDEVR 8
YP Y +VR
Sbjct: 281 YPRYPDVR 288


>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957

Query: 1 YPEYDEVR 8
YP Y +VR
Sbjct: 281 YPRYPDVR 288


>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968

Query: 1 YPEYDEVR 8
YP Y +VR
Sbjct: 281 YPRYPDVR 288


>sp|MUNS_REOVD|PROTEIN mu-NS|Reovirus type 3 (strain Dearing)

Query: 1 YPEYDE 6
YP YDE
Sbjct: 267 YPTYDE 272


>sp|MUNS_REOVL|PROTEIN mu-NS|Reovirus type 1 (strain Lang)

Query: 1 YPEYDE 6
YP YDE
Sbjct: 267 YPTYDE 272


>sp|MUNS_REOVJ|PROTEIN mu-NS|Reovirus type 2 (strain D5/Jones)

Query: 1 YPEYDE 6
YP YDE
Sbjct: 267 YPTYDE 272


>sp|CAPSD_CAMVC|CAPSID protein|Cauliflower mosaic virus (strain CM-1841)

Query: 2 PEYDEVRMN 10
PE+++VRM+
Sbjct: 91 PEFEQVRMD 99


>sp|CAPSD_CAMVN|CAPSID protein|Cauliflower mosaic virus (strain NY8153)

Query: 2 PEYDEVRMN 10
PE+++VRM+
Sbjct: 91 PEFEQVRMD 99


>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27

Query: 1 YPEYDEVRMN 10
Y E+D VR+N
Sbjct: 160 YYEHDGVRVN 169


>sp|ENV_SIVGB|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate GB1)

Query: 2 PEYDEVRM 9
P+YDEV +
Sbjct: 85 PDYDEVEI 92


>sp|VE6_HPV31|PROTEIN E6|Human papillomavirus 31

Query: 4 YDEVRMN 10
YDE+R+N
Sbjct: 23 YDELRLN 29




13|SequenceR|70|61|MGDDPYPEYD

>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2 GDDPYPEYD 10
GDDP PEYD
Sbjct: 2773 GDDPQPEYD 2781


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 2 GDDPYPEYD 10
GD+P+PEYD
Sbjct: 2782 GDEPHPEYD 2790


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2771 GDPPQPEYD 2779


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2771 GDPPQPEYD 2779


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2770 GDPPQPEYD 2778


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2771 GDPPQPEYD 2779


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2771 GDPPQPEYD 2779


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2770 GDPPQPEYD 2778


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2771 GDPPQPEYD 2779


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 2 GDDPYPEYD 10
GD+P+P YD
Sbjct: 2776 GDEPHPAYD 2784


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2770 GDPPKPEYD 2778


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2770 GDPPQPEYD 2778


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2770 GDPPQPEYD 2778


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2770 GDPPRPEYD 2778


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2793 GDPPKPEYD 2801


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2793 GDPPRPEYD 2801


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2793 GDPPRPEYD 2801


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2770 GDLPQPEYD 2778


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2793 GDLPRPEYD 2801


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 GDDPYPEYD 10
GD P PEYD
Sbjct: 2793 GDLPRPEYD 2801


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 2 GDDPYPEYD 10
GD+P P YD
Sbjct: 2775 GDEPSPTYD 2783


>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)

Query: 1 MGDDPYPE 8
+G DPYP+
Sbjct: 90 LGQDPYPD 97


>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 MGDDPYPE 8
+G DPYP+
Sbjct: 90 LGQDPYPD 97


>sp|YL115_MIMIV|PUTATIVE helicase L115|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 DDPYPEYD 10
D YPEYD
Sbjct: 161 DKSYPEYD 168


>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)

Query: 1 MGDDPYPE 8
+G DPYP+
Sbjct: 88 VGQDPYPD 95


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2 GDDPYPEYD 10
GD P P YD
Sbjct: 2779 GDAPQPTYD 2787


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2 GDDPYPEYD 10
GD P P YD
Sbjct: 2774 GDPPVPAYD 2782


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2 GDDPYPEYD 10
GD P P YD
Sbjct: 2774 GDPPVPAYD 2782


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 GDDPYPEYD 10
GD P P YD
Sbjct: 2778 GDAPQPTYD 2786


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2 GDDPYPEYD 10
GD P P YD
Sbjct: 2779 GDPPQPTYD 2787


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 2 GDDPYPEYD 10
GD P P YD
Sbjct: 2768 GDAPQPAYD 2776


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 GDDPYPEYD 10
GD P P YD
Sbjct: 2781 GDAPQPTYD 2789


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 2 GDDPYPEYD 10
GD P P YD
Sbjct: 2783 GDAPQPTYD 2791


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 GDDPYPEYD 10
GD P P YD
Sbjct: 2779 GDVPQPTYD 2787


>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)

Query: 4 DPYPEY 9
DPYP Y
Sbjct: 89 DPYPTY 94


>sp|COMPL_BPSPP|TAIL completion protein gp17|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 3 DDPYP 7
DDPYP
Sbjct: 38 DDPYP 42


>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 DPYPEYD 10
+PYP+Y+
Sbjct: 486 EPYPDYN 492


>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4 DPYPEYD 10
+PYP+Y+
Sbjct: 486 EPYPDYN 492


>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 DPYPEYD 10
+PYP+Y+
Sbjct: 486 EPYPDYN 492


>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 MGDDPYP 7
+G DPYP
Sbjct: 145 IGQDPYP 151


>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 GDDPY 6
GDDPY
Sbjct: 298 GDDPY 302


>sp|SEA_AVIET|TYROSINE-PROTEIN kinase transforming protein SEA|Avian erythroblastosis virus

Query: 2 GDDPYPEYD 10
G PYPE D
Sbjct: 262 GASPYPEVD 270


>sp|KR15_ICHVA|PROTEIN kinase ORF15|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 MGDDPYPE 8
+ D+PYPE
Sbjct: 7 LKDEPYPE 14


>sp|UNG_MIMIV|PROBABLE uracil-DNA glycosylase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 MGDDPYP 7
+G DPYP
Sbjct: 188 LGQDPYP 194


>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)

Query: 1 MGDDPYP 7
+G DPYP
Sbjct: 145 IGQDPYP 151


>sp|DPOL_FOWPN|DNA polymerase|Fowlpox virus (strain NVSL) (FPV)

Query: 5 PYPEY 9
PYPEY
Sbjct: 578 PYPEY 582


>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P

Query: 1 MGDDPYPEYD 10
+G P PEYD
Sbjct: 652 LGRRPSPEYD 661


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 2 GDDPYPEYD 10
GD P EYD
Sbjct: 2797 GDPPKAEYD 2805


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 4 DPYPEYD 10
DP P+YD
Sbjct: 125 DPNPDYD 131


>sp|VP16_EHV1B|TEGUMENT protein VP16 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 2 GDDPYPE 8
GD+P+PE
Sbjct: 172 GDEPFPE 178


>sp|REV_SIVG1|PROTEIN Rev|Simian immunodeficiency virus agm.grivet (isolate

Query: 2 GDDPYPEY 9
G +PYP++
Sbjct: 19 GSNPYPQF 26


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GDDPYPE 8
GD+P PE
Sbjct: 463 GDNPLPE 469


>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)

Query: 1 MGDDPYPE 8
M DDP PE
Sbjct: 145 MTDDPVPE 152


>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain

Query: 1 MGDDPYPE 8
M DDP PE
Sbjct: 145 MTDDPVPE 152


>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)

Query: 1 MGDDPYPE 8
M DDP PE
Sbjct: 145 MTDDPVPE 152


>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)

Query: 4 DPYPEY 9
+PYP+Y
Sbjct: 133 NPYPDY 138


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 MGDDPYPEY 9
+G DPY ++
Sbjct: 149 LGTDPYEDF 157


>sp|PRIM_EHV2|DNA primase|Equine herpesvirus 2 (strain 86/87)

Query: 4 DPYPEY 9
DP PEY
Sbjct: 20 DPLPEY 25


>sp|TEV2_BPT4|INTRON-ASSOCIATED endonuclease 2|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 DDPYPEY 9
DD YP Y
Sbjct: 243 DDNYPNY 249


>sp|ENV_SMRVH|ENVELOPE glycoprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 2 GDDPYP 7
GDDP P
Sbjct: 368 GDDPVP 373


>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)

Query: 4 DPYPEY 9
+PYP+Y
Sbjct: 133 NPYPDY 138


>sp|GAG_JEMBR|GAG polyprotein|Jembrana disease virus (JDV)

Query: 4 DPYPEY 9
+PYPE+
Sbjct: 280 EPYPEF 285


>sp|POL_JEMBR|GAG-POL polyprotein|Jembrana disease virus (JDV)

Query: 4 DPYPEY 9
+PYPE+
Sbjct: 280 EPYPEF 285


>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)

Query: 4 DPYPEY 9
+PYP+Y
Sbjct: 133 NPYPDY 138


>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)

Query: 4 DPYPEY 9
+PYP+Y
Sbjct: 133 NPYPDY 138


>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)

Query: 4 DPYPEY 9
+PYP+Y
Sbjct: 133 NPYPDY 138


>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)

Query: 4 DPYPEY 9
+PYP+Y
Sbjct: 133 NPYPDY 138


>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins

Query: 4 DPYPEY 9
+PYP+Y
Sbjct: 133 NPYPDY 138


>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 4 DPYPEY 9
+PYP+Y
Sbjct: 133 NPYPDY 138


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 MGDDPYPEY 9
+G DPY ++
Sbjct: 149 LGTDPYEDF 157


>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 4 DPYPEY 9
+PYP+Y
Sbjct: 133 NPYPDY 138


>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 4 DPYPEY 9
+PYP+Y
Sbjct: 133 NPYPDY 138


>sp|TIPJ_BPS27|TIP attachment protein J|Escherichia phage SECphi27

Query: 5 PYPEYD 10
PYP+Y+
Sbjct: 777 PYPQYE 782


>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)

Query: 4 DPYPEY 9
+PYP+Y
Sbjct: 133 NPYPDY 138


>sp|CAPSD_PICV|PROBABLE capsid protein|Pigeon circovirus (PiCV) (Columbid circovirus)

Query: 1 MGDDPYPEYD 10
+GDDP ++D
Sbjct: 131 LGDDPLMDFD 140


>sp|POLG_PVCV1|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 4 DPYPEY 9
DPYP Y
Sbjct: 2070 DPYPAY 2075


>sp|GAG_EIAVY|GAG polyprotein|Equine infectious anemia virus (strain

Query: 4 DPYPEY 9
+PYPE+
Sbjct: 283 EPYPEF 288


>sp|GAG_EIAVC|GAG polyprotein|Equine infectious anemia virus (isolate

Query: 4 DPYPEY 9
+PYPE+
Sbjct: 283 EPYPEF 288


>sp|GAG_EIAV9|GAG polyprotein|Equine infectious anemia virus (isolate

Query: 4 DPYPEY 9
+PYPE+
Sbjct: 283 EPYPEF 288


>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)

Query: 4 DPYPEY 9
+PYP+Y
Sbjct: 133 NPYPDY 138


>sp|POLG_PVCV2|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 4 DPYPEY 9
DPYP Y
Sbjct: 2071 DPYPAY 2076


>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 4 DPYPEY 9
+PYP+Y
Sbjct: 133 NPYPDY 138


>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)

Query: 4 DPYPEY 9
+PYP+Y
Sbjct: 133 NPYPDY 138


>sp|SHUT_ADEG1|SHUTOFF protein|Fowl adenovirus A serotype 1

Query: 4 DPYPEYD 10
DP PEYD
Sbjct: 144 DPEPEYD 150


>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7

Query: 1 MGDDPYP 7
MGDDP P
Sbjct: 29 MGDDPEP 35


>sp|RIR1_MUHVS|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Murid herpesvirus 1 (strain

Query: 2 GDDPYPEY 9
G DP+P++
Sbjct: 938 GADPFPKF 945




14|SequenceR|75|66|YDGYGMGDDP

>sp|RDRP_SSDRV|RNA replication protein|Sclerotinia sclerotiorum

Query: 2 DGYGMGDDP 10
+ YG+G DP
Sbjct: 292 ESYGIGSDP 300


>sp|POL2_SDVS5|RNA2 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 2 DGYGMGDD 9
DGYG G D
Sbjct: 1549 DGYGRGAD 1556


>sp|YL454_MIMIV|UNCHARACTERIZED protein L454|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YDGYGMG 7
+DGYG G
Sbjct: 1116 HDGYGRG 1122


>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca

Query: 3 GYGMGDD 9
GYG G+D
Sbjct: 1429 GYGKGND 1435


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 3 GYGMGDD 9
GYG G+D
Sbjct: 1429 GYGKGND 1435


>sp|Y075_NPVOP|UNCHARACTERIZED 14.9 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 DGYGMGDD 9
DGY + DD
Sbjct: 104 DGYRLSDD 111


>sp|Y045_OSHVF|UNCHARACTERIZED protein ORF45|Ostreid herpesvirus 1 (isolate France)

Query: 3 GYGMGD 8
GYGMG+
Sbjct: 22 GYGMGE 27


>sp|DPO24_BPK64|DEPOLYMERASE, capsule K1-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 2 DGYGMGD 8
DG+G GD
Sbjct: 655 DGFGQGD 661


>sp|DPO11_BPK64|DEPOLYMERASE, capsule K11-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 3 GYGMGDD 9
GY MGD+
Sbjct: 529 GYNMGDE 535




15|SequenceR|80|71|DPLKPYDGYG

>sp|CAPSD_BFDV|CAPSID protein|Beak and feather disease virus

Query: 1 DPLKPYDG 8
DPL P+DG
Sbjct: 145 DPLAPFDG 152


>sp|UL32_PSHV1|PACKAGING protein UL32|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 LKPYDGY 9
LKPY GY
Sbjct: 24 LKPYTGY 30


>sp|SSB_BPT7|SINGLE-STRANDED DNA-binding protein|Escherichia phage T7 (Bacteriophage T7)

Query: 2 PLKPYDG 8
PLKPY+G
Sbjct: 86 PLKPYEG 92


>sp|SPIKE_ADECT|FIBER protein|Canine adenovirus serotype 2 (strain

Query: 1 DPLKPYDGYG 10
DP+ PYD G
Sbjct: 13 DPVYPYDAPG 22


>sp|RIR1_BHV1C|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Bovine herpesvirus 1.1 (strain Cooper)

Query: 3 LKPYDGY 9
L P+DGY
Sbjct: 579 LMPFDGY 585


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 2 PLKPYDGY 9
PLKP+D +
Sbjct: 868 PLKPFDKF 875


>sp|COLL7_MIMIV|COLLAGEN-LIKE protein 7|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 PYDGYG 10
PYDGYG
Sbjct: 1849 PYDGYG 1854


>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca

Query: 1 DPLKPYD 7
DP+KP D
Sbjct: 1825 DPVKPLD 1831


>sp|GE_PSHV1|ENVELOPE glycoprotein E|Psittacid herpesvirus 1 (isolate Amazon

Query: 5 PYDGY 9
PYDGY
Sbjct: 257 PYDGY 261


>sp|SPIKE_ADECC|FIBER protein|Canine adenovirus serotype 1 (strain

Query: 1 DPLKPYDG 8
DP+ PYD
Sbjct: 13 DPVYPYDA 20


>sp|RIR1_SUHVK|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Suid herpesvirus 1 (strain Kaplan)

Query: 3 LKPYDGY 9
L+P+DG+
Sbjct: 612 LRPFDGF 618


>sp|SPIKE_ADECR|FIBER protein|Canine adenovirus serotype 1 (strain

Query: 1 DPLKPYDG 8
DP+ PYD
Sbjct: 13 DPVYPYDA 20


>sp|SPIKE_ADECG|FIBER protein|Canine adenovirus serotype 1 (strain

Query: 1 DPLKPYDG 8
DP+ PYD
Sbjct: 13 DPVYPYDA 20


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 1 DPLKPYD 7
DP+KP D
Sbjct: 1825 DPVKPLD 1831


>sp|POLR_NORAV|REPLICATION polyprotein|Nora virus

Query: 3 LKPYDGY 9
L PYD Y
Sbjct: 1611 LNPYDSY 1617


>sp|P3_PCVC|UNCHARACTERIZED protein p3|Penicillium chrysogenum virus (isolate Caston/2003)

Query: 3 LKPYDGYG 10
LK Y GYG
Sbjct: 309 LKAYRGYG 316


>sp|LEF7_NPVOP|LATE expression factor 7|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 DPLKPYDG 8
DP +PY G
Sbjct: 83 DPARPYVG 90


>sp|ICP27_ELHVK|MRNA export factor ICP27 homolog|Elephantid herpesvirus 1 (isolate Asian

Query: 2 PLKPYDGYG 10
P+ PYD Y
Sbjct: 101 PVNPYDPYA 109


>sp|SPI1_SWPVK|PROBABLE serine proteinase inhibitor 1|Swinepox virus (strain Kasza)

Query: 2 PLKPYDGY 9
PL PY Y
Sbjct: 38 PLSPYTNY 45


>sp|SPIKE_ADEP3|FIBER protein|Porcine adenovirus A serotype 3

Query: 1 DPLKPYD 7
DP+ PYD
Sbjct: 15 DPVYPYD 21


>sp|CAPSD_TNVD|CAPSID protein|Tobacco necrosis virus (strain D)

Query: 5 PYDGYG 10
PY GYG
Sbjct: 175 PYAGYG 180


>sp|Y362_ATV|UNCHARACTERIZED protein ORF362|Acidianus two-tailed virus (ATV)

Query: 3 LKPYDGY 9
LKP DGY
Sbjct: 140 LKPIDGY 146




16|SequenceR|85|76|EHQSRDPLKP

>sp|GH_PSHV1|ENVELOPE glycoprotein H|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 EHQSRDPL 8
EHQ+++PL
Sbjct: 499 EHQAQNPL 506


>sp|ORF5_BOTVX|UNCHARACTERIZED ORF5 protein|Botrytis virus X (isolate Botrytis

Query: 2 HQSRDPLKP 10
H +R+PLKP
Sbjct: 111 HVTREPLKP 119




17|SequenceR|90|81|YWPDREHQSR

>sp|CAPSD_NCBVS|CAPSID protein|Nudaurelia capensis beta virus (isolate

Query: 1 YWPDREHQ 8
+ PD+EHQ
Sbjct: 256 FQPDKEHQ 263


>sp|CAPSH_ADEG1|HEXON protein|Fowl adenovirus A serotype 1

Query: 1 YWPDREH 7
+WPDR +
Sbjct: 755 FWPDRHY 761


>sp|TMP_LAMBD|TAPE measure protein|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 YWPDRE 6
YW DRE
Sbjct: 356 YWDDRE 361


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 YWPDREHQ 8
Y PD++HQ
Sbjct: 799 YTPDKKHQ 806




18|SequenceR|95|86|PQDWSYWPDR

>sp|VR2A_BPT4|PROTEIN rIIA|Enterobacteria phage T4 (Bacteriophage T4)

Query: 6 YWPDR 10
YWPDR
Sbjct: 228 YWPDR 232


>sp|RDRP_SCPMV|REPLICASE polyprotein P2AB|Southern cowpea mosaic virus (SCPMV)

Query: 2 QDWSYWPD 9
QDW W D
Sbjct: 709 QDWELWAD 716


>sp|MATRX_SENDO|MATRIX protein|Sendai virus (strain Ohita) (SeV)

Query: 1 PQDWSYWPD 9
P+D+ Y+P+
Sbjct: 328 PRDFRYYPN 336


>sp|MATRX_SENDH|MATRIX protein|Sendai virus (strain Harris) (SeV)

Query: 1 PQDWSYWPD 9
P+D+ Y+P+
Sbjct: 328 PRDFRYYPN 336


>sp|MATRX_SENDE|MATRIX protein|Sendai virus (strain Enders) (SeV)

Query: 1 PQDWSYWPD 9
P+D+ Y+P+
Sbjct: 328 PRDFRYYPN 336


>sp|MATRX_SENDZ|MATRIX protein|Sendai virus (strain Z) (SeV)

Query: 1 PQDWSYWPD 9
P+D+ Y+P+
Sbjct: 328 PRDFRYYPN 336


>sp|MATRX_SENDA|MATRIX protein|Sendai virus (strain Hamamatsu) (SeV)

Query: 1 PQDWSYWPD 9
P+D+ Y+P+
Sbjct: 328 PRDFRYYPN 336


>sp|MATRX_SENDF|MATRIX protein|Sendai virus (strain Fushimi) (SeV)

Query: 1 PQDWSYWPD 9
P+D+ Y+P+
Sbjct: 328 PRDFRYYPN 336


>sp|ENV_MLVCB|ENVELOPE glycoprotein|Cas-Br-E murine leukemia virus

Query: 4 WSYWPD 9
W++WPD
Sbjct: 66 WTWWPD 71


>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)

Query: 3 DWSYWP 8
DW+Y+P
Sbjct: 117 DWAYYP 122


>sp|ENV_MLVRK|ENVELOPE glycoprotein|Radiation murine leukemia virus (strain

Query: 4 WSYWPD 9
W++WPD
Sbjct: 66 WTWWPD 71


>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)

Query: 3 DWSYW 7
DW YW
Sbjct: 92 DWDYW 96


>sp|ENV_MLVRD|ENVELOPE glycoprotein|Radiation murine leukemia virus

Query: 4 WSYWPD 9
W++WPD
Sbjct: 66 WTWWPD 71


>sp|VP9_MPRVN|PUTATIVE outer capsid protein VP9|Micromonas pusilla reovirus (isolate

Query: 1 PQDWSYWPDR 10
P D YWP R
Sbjct: 182 PDD-DYWPHR 190


>sp|VP4_ROT46|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 PQDWSY 6
PQ+W Y
Sbjct: 186 PQEWGY 191


>sp|RDRP_CFMVN|REPLICASE polyprotein P2AB|Cocksfoot mottle virus (isolate Dactylis

Query: 2 QDWSYWPD 9
QDW W D
Sbjct: 706 QDWELWAD 713


>sp|VME1_IBVK|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 WSYWP 8
W +WP
Sbjct: 56 WCFWP 60


>sp|VME1_IBV6|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 WSYWP 8
W +WP
Sbjct: 56 WCFWP 60


>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)

Query: 4 WSYWPDR 10
WS+W R
Sbjct: 126 WSFWVTR 132


>sp|VME1_IBVG|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 WSYWP 8
W +WP
Sbjct: 54 WCFWP 58


>sp|VME1_IBVM|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 WSYWP 8
W +WP
Sbjct: 56 WCFWP 60


>sp|VME1_IBVH5|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 WSYWP 8
W +WP
Sbjct: 56 WCFWP 60


>sp|VME1_IBVH1|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 WSYWP 8
W +WP
Sbjct: 56 WCFWP 60


>sp|VME1_IBVD1|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 WSYWP 8
W +WP
Sbjct: 56 WCFWP 60


>sp|VME1_IBV41|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 WSYWP 8
W +WP
Sbjct: 56 WCFWP 60


>sp|RDRP_SBMVA|REPLICASE polyprotein P2AB|Southern bean mosaic virus (isolate

Query: 2 QDWSYWPD 9
QDW W D
Sbjct: 707 QDWELWAD 714


>sp|VME1_IBVB2|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 WSYWP 8
W +WP
Sbjct: 56 WCFWP 60


>sp|VME1_IBVDE|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 WSYWP 8
W +WP
Sbjct: 56 WCFWP 60




19|SequenceR|100|91|NLRLGPQDWS

>sp|VG72_GAHVM|UNCHARACTERIZED gene 72 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 NLRLGPQDWS 10
N+RLG WS
Sbjct: 229 NIRLGSTRWS 238


>sp|TRX1_EHV1B|TRIPLEX capsid protein 1|Equine herpesvirus 1 (strain Ab4p)

Query: 1 NLRLGPQDW 9
N+R PQDW
Sbjct: 452 NVRWDPQDW 460


>sp|TRX1_EHV1V|TRIPLEX capsid protein 1|Equine herpesvirus 1 (strain V592)

Query: 1 NLRLGPQDW 9
N+R PQDW
Sbjct: 452 NVRWDPQDW 460


>sp|VG47_ICHVA|SUBTILISIN-LIKE protease|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 NLRLGPQDW 9
N +GP DW
Sbjct: 65 NFSMGPVDW 73


>sp|Y059_OSHVF|UNCHARACTERIZED protein ORF59|Ostreid herpesvirus 1 (isolate France)

Query: 4 LGPQDWS 10
LGP+D+S
Sbjct: 264 LGPEDYS 270


>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)

Query: 1 NLRLGPQDW 9
NL++ PQ W
Sbjct: 568 NLKIRPQTW 576


>sp|CAPSD_WCCVB|CAPSID protein|White clover cryptic virus 1

Query: 2 LRLGPQ 7
LRLGPQ
Sbjct: 266 LRLGPQ 271


>sp|CAPSH_ADEP3|HEXON protein|Porcine adenovirus A serotype 3

Query: 3 RLGPQDWS 10
+LGP WS
Sbjct: 187 QLGPSSWS 194




20|SequenceR|105|96|MPEGWNLRLG

>sp|VP7_ROTPC|OUTER capsid glycoprotein VP7|Rotavirus C (strain RVC/Pig/United

Query: 2 PEGWNLR 8
PEGW LR
Sbjct: 324 PEGWMLR 330


>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate

Query: 2 PEGWNLR 8
PEGW LR
Sbjct: 324 PEGWMLR 330


>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United

Query: 2 PEGWNLR 8
PEGW LR
Sbjct: 324 PEGWMLR 330


>sp|VP7_ROTBS|OUTER capsid glycoprotein VP7|Rotavirus C (isolate

Query: 2 PEGWNLR 8
PEGW LR
Sbjct: 324 PEGWMLR 330


>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus

Query: 1 MPEGWNL 7
+PEGW+L
Sbjct: 773 LPEGWSL 779


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 2 PEGWN 6
PEGWN
Sbjct: 284 PEGWN 288


>sp|POL_IPMA|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 1 MPEGWNL 7
+P GWNL
Sbjct: 107 LPRGWNL 113


>sp|VPM_BPHC1|PROBABLE terminase, endonuclease subunit|Haemophilus phage HP1 (strain

Query: 1 MPEGWNLRL 9
MP+GW L
Sbjct: 120 MPQGWQTTL 128


>sp|1A_CCMV|REPLICATION protein 1a|Cowpea chlorotic mottle virus (CCMV)

Query: 1 MPEGWNL 7
+PE WNL
Sbjct: 317 IPEDWNL 323


>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5

Query: 2 PEGWNLRLG 10
PE WN R G
Sbjct: 475 PEYWNFRNG 483


>sp|LTP_PSHV1|LARGE tegument protein deneddylase|Psittacid herpesvirus 1 (isolate

Query: 2 PEGWNL 7
P+GWN+
Sbjct: 219 PDGWNI 224


>sp|CVC2_SHV21|CAPSID vertex component 2|Saimiriine herpesvirus 2 (strain 11)

Query: 5 WNLRLG 10
WNLR+G
Sbjct: 350 WNLRVG 355


>sp|VP2_LBVAV|PROTEIN 2|Lettuce big-vein associated virus (isolate

Query: 1 MPEGWNLRLG 10
M +GW RLG
Sbjct: 49 MNQGWMSRLG 58


>sp|DPOL_HBVOR|PROTEIN P|Orangutan hepatitis B virus (isolate

Query: 2 PEGWNLRLG 10
P GW L LG
Sbjct: 692 PTGWGLALG 700


>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)

Query: 2 PEGWNLRLG 10
P WN R G
Sbjct: 445 PSTWNRRFG 453


>sp|SPIKE_CVBQ|SPIKE glycoprotein|Bovine coronavirus (strain Quebec) (BCoV)

Query: 2 PEGWNLRLG 10
P WN R G
Sbjct: 445 PSTWNRRFG 453


>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)

Query: 2 PEGWNLRLG 10
P WN R G
Sbjct: 445 PSTWNRRFG 453


>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)

Query: 2 PEGWNLRLG 10
P WN R G
Sbjct: 445 PSTWNRRFG 453


>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 2 PEGWNLRLG 10
P WN R G
Sbjct: 445 PSTWNRRFG 453


>sp|SPIKE_CVBLS|SPIKE glycoprotein|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)

Query: 2 PEGWNLRLG 10
P WN R G
Sbjct: 445 PSTWNRRFG 453


>sp|SPIKE_CVBL9|SPIKE glycoprotein|Bovine coronavirus (strain L9) (BCoV)

Query: 2 PEGWNLRLG 10
P WN R G
Sbjct: 445 PSTWNRRFG 453


>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 2 PEGWNLRLG 10
P WN R G
Sbjct: 445 PSTWNRRFG 453


>sp|GPF_BPMU|PUTATIVE capsid assembly protein F|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 PEGWNLR 8
P GWN R
Sbjct: 179 PNGWNCR 185


>sp|Y094_OSHVF|UNCHARACTERIZED protein ORF94|Ostreid herpesvirus 1 (isolate France)

Query: 2 PEGWNLR 8
PEGW+ R
Sbjct: 330 PEGWSNR 336


>sp|SPIKE_IBVU3|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 PEGWNLRLG 10
P+GW+L G
Sbjct: 19 PDGWHLHGG 27


>sp|SPIKE_IBVU2|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 PEGWNLRLG 10
P+GW+L G
Sbjct: 19 PDGWHLHGG 27


>sp|SPIKE_IBVK|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 PEGWNLRLG 10
P+GW+L G
Sbjct: 37 PDGWHLHGG 45


>sp|SPIKE_IBVD2|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 PEGWNLRLG 10
P+GW+L G
Sbjct: 37 PDGWHLHGG 45


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 2 PEGWNLRLG 10
P WN R G
Sbjct: 449 PSTWNKRFG 457


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 MPEGWNL 7
+PEGW +
Sbjct: 1504 LPEGWRV 1510


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 MPEGWNL 7
+PEGW +
Sbjct: 1504 LPEGWRV 1510


>sp|SPIKE_IBVB|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 PEGWNLRLG 10
P GW+L+ G
Sbjct: 37 PSGWHLQGG 45


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 705 PTGWGLAMG 713


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 1 MPEGWNLRLG 10
+P GW + LG
Sbjct: 965 LPPGWMIVLG 974


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 1 MPEGW 5
+PEGW
Sbjct: 2530 LPEGW 2534


>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 1 MPEGW 5
+PEGW
Sbjct: 2530 LPEGW 2534


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 1 MPEGW 5
+PEGW
Sbjct: 2531 LPEGW 2535


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAMG 711


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 692 PTGWGLAMG 700


>sp|VP75_SHV21|PROBABLE membrane antigen 75|Saimiriine herpesvirus 2 (strain 11)

Query: 2 PEGWNLRL 9
PE W L L
Sbjct: 1151 PESWTLEL 1158


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 702 PTGWGLAIG 710


>sp|DPOL_HBVGB|PROTEIN P|Gibbon hepatitis B virus subtype

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 692 PTGWGLAIG 700


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 698 PTGWGLAIG 706


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 705 PTGWGLAIG 713


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 698 PTGWGLAIG 706


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 705 PTGWGLAIG 713


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 702 PTGWGLAIG 710


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|TMP_BPN15|TAPE measure protein|Escherichia phage N15 (Bacteriophage N15)

Query: 3 EGWNLRLG 10
E WNLR G
Sbjct: 338 EIWNLRKG 345


>sp|POLG_OMV|GENOME polyprotein|Ornithogalum mosaic virus

Query: 1 MPEGW 5
+PEGW
Sbjct: 603 LPEGW 607


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 702 PTGWGLAIG 710


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 702 PTGWGLAIG 710


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 702 PTGWGLAIG 710


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 705 PTGWGLAIG 713


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 705 PTGWGLAIG 713


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 705 PTGWGLAIG 713


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 698 PTGWGLAIG 706


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 702 PTGWGLAIG 710


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 702 PTGWGLAIG 710


>sp|DPOL2_BPK52|DEPOLYMERASE 2, capsule K5-specific|Klebsiella phage K5-2 (Bacteriophage K5-2)

Query: 1 MPEGWNLR 8
+PEG NLR
Sbjct: 275 LPEGDNLR 282


>sp|U22_HHV6Z|PROTEIN U22|Human herpesvirus 6B (strain Z29)

Query: 1 MPEGWNL 7
+P+GW+L
Sbjct: 2 VPQGWSL 8


>sp|DPOL2_BPK54|DEPOLYMERASE 2, capsule K5-specific|Klebsiella phage K5-4 (Bacteriophage K5-4)

Query: 1 MPEGWNLR 8
+PEG NLR
Sbjct: 274 LPEGDNLR 281


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 MPEGWNL 7
+PEGW +
Sbjct: 1504 VPEGWRV 1510


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 MPEGWNL 7
+PEGW +
Sbjct: 1504 VPEGWRV 1510


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 MPEGWNL 7
+PEGW +
Sbjct: 1504 VPEGWRV 1510


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 MPEGWNL 7
+PEGW +
Sbjct: 1504 VPEGWRV 1510


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 MPEGWNL 7
+PEGW +
Sbjct: 1504 VPEGWRV 1510


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 MPEGWNL 7
+PEGW +
Sbjct: 1504 VPEGWRV 1510


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 MPEGWNL 7
+PEGW +
Sbjct: 1504 VPEGWRV 1510


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 MPEGWNL 7
+PEGW +
Sbjct: 1504 VPEGWRV 1510


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLVMG 711


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 692 PTGWGLVMG 700


>sp|SPIKE_IBVU1|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 PEGWNLRLG 10
P GW+L G
Sbjct: 19 PNGWHLHGG 27


>sp|SPIKE_IBVM|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 PEGWNLRLG 10
P GW+L G
Sbjct: 37 PNGWHLHGG 45


>sp|SPIKE_IBVD3|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 PEGWNLRLG 10
P GW+L G
Sbjct: 37 PNGWHLHGG 45


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 703 PTGWGLAIG 711


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 692 PTGWGLVMG 700


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 692 PTGWGLVMG 700


>sp|DPOL_HBVCP|PROTEIN P|Chimpanzee hepatitis B virus (isolate

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 692 PTGWGLVMG 700


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 692 PTGWGLVMG 700


>sp|DPOL_HBVGO|PROTEIN P|Gorilla hepatitis B virus (isolate

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 692 PTGWGLVIG 700


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 692 PTGWGLGMG 700


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 692 PTGWGLVMG 700


>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)

Query: 1 MPEGW 5
+PEGW
Sbjct: 602 LPEGW 606


>sp|DPOL_WMHBV|PROTEIN P|Woolly monkey hepatitis B virus

Query: 2 PEGWNLRLG 10
P GW L +G
Sbjct: 693 PTGWGLVMG 701


>sp|361L_IIV6|PROBABLE cysteine proteinase 361L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 PEGWNLRLG 10
P+G ++RLG
Sbjct: 449 PQGQHIRLG 457


>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5 WNLRLG 10
WNLR+G
Sbjct: 367 WNLRVG 372


>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5 WNLRLG 10
WNLR+G
Sbjct: 367 WNLRVG 372


>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5 WNLRLG 10
WNLR+G
Sbjct: 367 WNLRVG 372


>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PEGWNLRL 9
P GWNL L
Sbjct: 93 PPGWNLVL 100


>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 PEGWNLRL 9
P GWNL L
Sbjct: 93 PPGWNLVL 100


>sp|POL_VILV1|GAG-POL polyprotein|Maedi visna virus (strain 1514

Query: 1 MPEGWNL 7
+P+GW L
Sbjct: 691 LPQGWKL 697


>sp|POL_VILVK|GAG-POL polyprotein|Maedi visna virus (strain KV1772)

Query: 1 MPEGWNL 7
+P+GW L
Sbjct: 691 LPQGWKL 697


>sp|ENV_FSVGA|ENVELOPE glycoprotein|Feline sarcoma virus (strain Gardner-Arnstein)

Query: 2 PEGWNLRL 9
P+ W LRL
Sbjct: 213 PKSWGLRL 220


>sp|POL_VILV2|GAG-POL polyprotein|Maedi visna virus (strain 1514

Query: 1 MPEGWNL 7
+P+GW L
Sbjct: 691 LPQGWKL 697


>sp|POL_VILV|GAG-POL polyprotein|Maedi visna virus (strain 1514)

Query: 1 MPEGWNL 7
+P+GW L
Sbjct: 691 LPQGWKL 697


>sp|POL_OMVVS|POL polyprotein|Ovine maedi visna related virus

Query: 1 MPEGWNL 7
+P+GW L
Sbjct: 271 LPQGWKL 277


>sp|ENV_FLVLB|ENVELOPE glycoprotein|Feline leukemia virus (strain B/lambda-B1)

Query: 2 PEGWNLRL 9
P+ W LRL
Sbjct: 213 PKSWGLRL 220


>sp|POL_CAEVC|POL polyprotein|Caprine arthritis encephalitis virus (strain

Query: 1 MPEGWNL 7
+P+GW L
Sbjct: 295 LPQGWKL 301


>sp|ENV_FSVST|ENVELOPE glycoprotein|Feline sarcoma virus (strain Snyder-Theilen)

Query: 2 PEGWNLRL 9
P+ W LRL
Sbjct: 213 PKSWGLRL 220


>sp|ENV_FLVC6|ENVELOPE glycoprotein|Feline leukemia virus (isolate CFE-6)

Query: 2 PEGWNLRL 9
P+ W LRL
Sbjct: 213 PKSWGLRL 220




21|SequenceR|110|101|DLHWHMPEGW

>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)

Query: 1 DLHWHMPEG 9
D+H+H P G
Sbjct: 1498 DIHYHRPSG 1506


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 DLHWHMPEG 9
D+H+H P G
Sbjct: 1498 DVHYHRPSG 1506


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 DLHWHMPEG 9
D+H+H P G
Sbjct: 1498 DVHYHRPSG 1506


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 1 DLHWHMPEG 9
D+H+H P G
Sbjct: 1498 DVHYHRPSG 1506


>sp|SHUT_ADEP3|SHUTOFF protein|Porcine adenovirus A serotype 3

Query: 1 DLHWHMPEG 9
D HW +P G
Sbjct: 208 DAHWRLPSG 216


>sp|Y094_OSHVF|UNCHARACTERIZED protein ORF94|Ostreid herpesvirus 1 (isolate France)

Query: 5 HMPEGW 10
H PEGW
Sbjct: 328 HYPEGW 333


>sp|ITP_PSHV1|INNER tegument protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 LHWHMPEG 9
L W+MP+G
Sbjct: 680 LSWNMPDG 687


>sp|LTP_PSHV1|LARGE tegument protein deneddylase|Psittacid herpesvirus 1 (isolate

Query: 2 LHWHMPEGW 10
L W P+GW
Sbjct: 214 LLWLYPDGW 222


>sp|K1_HHV8P|PROTEIN K1|Human herpesvirus 8 type P

Query: 4 WHMPEG 9
WH+P G
Sbjct: 127 WHLPNG 132


>sp|GH_GPCMV|ENVELOPE glycoprotein H|Guinea pig cytomegalovirus (strain 22122)

Query: 4 WHMPEGW 10
WH P G+
Sbjct: 148 WHTPSGY 154


>sp|POL_AVIRE|GAG-POL polyprotein|Avian reticuloendotheliosis virus

Query: 4 WHMPEG 9
WH+P+G
Sbjct: 785 WHLPDG 790


>sp|TIPJ_BPS27|TIP attachment protein J|Escherichia phage SECphi27

Query: 2 LHWHMPEG 9
+ W MPEG
Sbjct: 743 VKWGMPEG 750


>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus

Query: 2 LHWHMPEGW 10
+ W P GW
Sbjct: 289 IEWENPSGW 297


>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate

Query: 2 LHWHMPEGW 10
+ W P GW
Sbjct: 289 IEWENPSGW 297


>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)

Query: 1 DLHWHMPEG 9
++H+H P G
Sbjct: 1498 EIHYHRPSG 1506


>sp|130R_IIV6|UNCHARACTERIZED protein 130R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 DLHWHMPEGW 10
DL++ MP W
Sbjct: 102 DLYFKMPRSW 111


>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen

Query: 2 LHWHMPEGW 10
+ W P GW
Sbjct: 286 IEWENPSGW 294


>sp|PG204_VACCW|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain

Query: 2 LHWHMPEGW 10
+ W P GW
Sbjct: 286 IEWENPSGW 294


>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain

Query: 2 LHWHMPEGW 10
+ W P GW
Sbjct: 288 IEWENPSGW 296


>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)

Query: 2 LHWHMPEGW 10
+ W P GW
Sbjct: 286 IEWENPSGW 294


>sp|VPM_BPHC1|PROBABLE terminase, endonuclease subunit|Haemophilus phage HP1 (strain

Query: 6 MPEGW 10
MP+GW
Sbjct: 120 MPQGW 124


>sp|ENLYS_BPK11|ENDOLYSIN phage K11 (Bacteriophage K11)

Query: 3 HWHMPEGW 10
WH +GW
Sbjct: 35 QWHKEQGW 42


>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 LHWHMPE 8
LHW +P+
Sbjct: 70 LHWTLPD 76


>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 LHWHMPE 8
LHW +P+
Sbjct: 70 LHWTLPD 76


>sp|CAPSH_ADEP3|HEXON protein|Porcine adenovirus A serotype 3

Query: 4 WHMPEGW 10
+H+PEG+
Sbjct: 766 YHLPEGY 772


>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)

Query: 4 WHMPEG 9
WH+P G
Sbjct: 201 WHLPSG 206


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 LHWHMPEG 9
LHW +P G
Sbjct: 57 LHWKVPIG 64


>sp|T3RE_BPP1|TYPE III restriction-modification enzyme EcoPI|Escherichia phage P1

Query: 4 WHMPEGW 10
W + EGW
Sbjct: 502 WTLREGW 508


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 WHMPEG 9
WH P+G
Sbjct: 1111 WHAPQG 1116


>sp|ENLYS_BPK32|ENDOLYSIN phage KP32 (Bacteriophage KP32)

Query: 3 HWHMPEGW 10
WH +GW
Sbjct: 35 QWHKEQGW 42


>sp|YL504_MIMIV|UNCHARACTERIZED protein L504|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DLHWHMPEGW 10
D W++ E W
Sbjct: 356 DAQWYIVEQW 365


>sp|ENLYS_BPT7|ENDOLYSIN phage T7 (Bacteriophage T7)

Query: 3 HWHMPEGW 10
WH +GW
Sbjct: 35 QWHKEQGW 42


>sp|ENLYS_BPT3|ENDOLYSIN phage T3 (Bacteriophage T3)

Query: 3 HWHMPEGW 10
WH +GW
Sbjct: 35 QWHKEQGW 42


>sp|RPOL_BPT3|DNA-DIRECTED RNA polymerase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 2 LHWHMPEGW 10
+HW P+G+
Sbjct: 726 VHWTTPDGF 734


>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian

Query: 3 HWHMPEG 9
+WH+PE
Sbjct: 319 NWHVPEA 325


>sp|SPIKE_PEDV7|SPIKE glycoprotein|Porcine epidemic diarrhea virus (strain

Query: 1 DLHWHMPEGW 10
D + H+PEG+
Sbjct: 242 DSNGHIPEGF 251


>sp|POL_EIAVC|POL polyprotein|Equine infectious anemia virus (isolate

Query: 4 WHMPEGW 10
W M +GW
Sbjct: 584 WEMQKGW 590


>sp|POL_EIAV9|POL polyprotein|Equine infectious anemia virus (isolate

Query: 4 WHMPEGW 10
W M +GW
Sbjct: 584 WEMQKGW 590


>sp|POL_EIAVY|POL polyprotein|Equine infectious anemia virus (strain

Query: 4 WHMPEGW 10
W M +GW
Sbjct: 583 WEMQKGW 589


>sp|RPOL_BPK11|DNA-DIRECTED RNA polymerase|Enterobacteria phage K11 (Bacteriophage K11)

Query: 2 LHWHMPEGW 10
+HW P+G+
Sbjct: 748 IHWVTPDGF 756


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 LHWHMPE 8
LH H+PE
Sbjct: 637 LHTHVPE 643


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 2 LHWHMPE 8
LH H+PE
Sbjct: 637 LHTHVPE 643


>sp|RPOTF_PRRSL|REPLICASE polyprotein 1TF|Porcine reproductive and respiratory syndrome

Query: 2 LHWHMPEG 9
LHW +P G
Sbjct: 57 LHWKVPIG 64


>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 LHWHMPEG 9
+ W MPEG
Sbjct: 156 VQWLMPEG 163


>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 LHWHMPEG 9
+ W MPEG
Sbjct: 156 VQWLMPEG 163


>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 LHWHMPEG 9
+ W MPEG
Sbjct: 156 VQWLMPEG 163


>sp|RPOL_BPT7|T7 RNA polymerase|Escherichia phage T7 (Bacteriophage T7)

Query: 2 LHWHMPEGW 10
+HW P+G+
Sbjct: 725 VHWVTPDGF 733


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 1 DLHWHMPE 8
+L WH P+
Sbjct: 1599 ELAWHQPQ 1606




22|SequenceR|115|106|NRNYMDLHWH

>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 5 MDLHWH 10
M+LHW+
Sbjct: 1505 MELHWY 1510


>sp|DPO11_BPK64|DEPOLYMERASE, capsule K11-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 3 NYMDLHW 9
NY+D+ W
Sbjct: 176 NYIDMAW 182


>sp|CHMA_BPDPK|CHIMALLIN phage phiKZ

Query: 4 YMDLHW 9
++DLHW
Sbjct: 288 FVDLHW 293


>sp|YR135_MIMIV|PUTATIVE GMC-type oxidoreductase R135|Acanthamoeba polyphaga mimivirus

Query: 1 NRNYMD 6
NRNY+D
Sbjct: 288 NRNYVD 293


>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is

Query: 4 YMDLHW 9
Y+D HW
Sbjct: 1121 YLDEHW 1126


>sp|THY_BPT5|PROBABLE thymidylate synthase|Escherichia phage T5 (Enterobacteria phage

Query: 1 NRNYMDLHW 9
N Y+DL W
Sbjct: 166 NDGYLDLKW 174


>sp|DPOL_NPVCF|DNA polymerase|Choristoneura fumiferana nuclear polyhedrosis virus

Query: 1 NRNYMDLHWH 10
N N +DL+W
Sbjct: 360 NDNKVDLNWQ 369




23|SequenceR|120|111|STDVRNRNYM

>sp|NSP3_ROTHS|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])

Query: 1 STDVRNRNYM 10
S+ +RNRN+M
Sbjct: 79 SSSIRNRNWM 88


>sp|NSP3_ROTHD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 1 STDVRNRNYM 10
S+ +RNRN+M
Sbjct: 79 SSSIRNRNWM 88


>sp|NSP3_ROTHL|NON-STRUCTURAL protein 3|Rotavirus A (strain

Query: 1 STDVRNRNYM 10
S+ +RNRN+M
Sbjct: 79 SSSIRNRNWM 88


>sp|NSP3_ROTH6|NON-STRUCTURAL protein 3|Rotavirus A (strain

Query: 1 STDVRNRNYM 10
S+ +RNRN+M
Sbjct: 79 SSSIRNRNWM 88


>sp|NSP3_ROTRH|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Monkey/United

Query: 1 STDVRNRNYM 10
S+ +RNRN+M
Sbjct: 79 SSAIRNRNWM 88


>sp|NSP3_ROT41|NON-STRUCTURAL protein 3|Rotavirus A (isolate

Query: 4 VRNRNYM 10
VRNRN+M
Sbjct: 82 VRNRNWM 88


>sp|NSP3_ROTH7|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United

Query: 4 VRNRNYM 10
VRNRN+M
Sbjct: 79 VRNRNWM 85


>sp|NSP3_ROTP5|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Pig/United

Query: 4 VRNRNYM 10
+RNRN+M
Sbjct: 82 IRNRNWM 88


>sp|NSP3_ROTHP|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 4 VRNRNYM 10
+RNRN+M
Sbjct: 79 IRNRNWM 85


>sp|NSP3_ROTHW|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 4 VRNRNYM 10
+RNRN+M
Sbjct: 82 IRNRNWM 88


>sp|NSP3_ROTHT|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 4 VRNRNYM 10
+RNRN+M
Sbjct: 82 IRNRNWM 88


>sp|NSP3_ROTWI|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United

Query: 4 VRNRNYM 10
+RNRN+M
Sbjct: 82 IRNRNWM 88


>sp|NSP3_ROTHK|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 4 VRNRNYM 10
+RNRN+M
Sbjct: 82 IRNRNWM 88


>sp|NSP3_ROTAD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 4 VRNRNYM 10
+RNRN+M
Sbjct: 79 IRNRNWM 85


>sp|NSP3_ROTAM|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 4 VRNRNYM 10
+RNRN+M
Sbjct: 79 IRNRNWM 85


>sp|NSP3_ROTH3|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])

Query: 4 VRNRNYM 10
+RNRN+M
Sbjct: 82 IRNRNWM 88


>sp|BP06_BPT4|BASEPLATE wedge protein gp6|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 TDVRNRNYM 10
TD NRNY+
Sbjct: 115 TDALNRNYI 123




24|SequenceR|125|116|SVPTPSTDVR

>sp|LTP_SHV21|LARGE tegument protein deneddylase|Saimiriine herpesvirus 2 (strain 11)

Query: 2 VPTPSTDVR 10
VPTPS DV+
Sbjct: 1025 VPTPSRDVK 1033


>sp|VG10_EHV2|UNCHARACTERIZED gene 10 protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 SVPTPSTDVR 10
+VP STD+R
Sbjct: 365 AVPVNSTDIR 374


>sp|MCP_LCDV1|MAJOR capsid protein|Lymphocystis disease virus 1 (isolate

Query: 1 SVPTPSTDVR 10
++P+P+ D+R
Sbjct: 283 TIPSPNFDIR 292


>sp|TEG3_VZVO|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 3 PTPSTDV 9
PTP TDV
Sbjct: 193 PTPHTDV 199


>sp|TEG3_VZVD|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 PTPSTDV 9
PTP TDV
Sbjct: 193 PTPHTDV 199




25|SequenceR|130|121|CMVHWSVPTP

>sp|RPOL_BPT3|DNA-DIRECTED RNA polymerase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 1 CMVHWSVP 8
C VHW+ P
Sbjct: 724 CAVHWTTP 731


>sp|RPOL_BPT7|T7 RNA polymerase|Escherichia phage T7 (Bacteriophage T7)

Query: 1 CMVHWSVP 8
C VHW P
Sbjct: 723 CAVHWVTP 730


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 1 CMVHWSVPTP 10
C V+W P P
Sbjct: 607 CNVYWQAPCP 616


>sp|RPOL_BPK11|DNA-DIRECTED RNA polymerase|Enterobacteria phage K11 (Bacteriophage K11)

Query: 1 CMVHWSVP 8
C +HW P
Sbjct: 746 CAIHWVTP 753


>sp|POXIN_NPVOP|POXIN pseudotsugata multicapsid polyhedrosis virus

Query: 2 MVHWSVPTP 10
++HW +P P
Sbjct: 215 LMHWRLPGP 223


>sp|CVC1_PSHV1|CAPSID vertex component 1|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 CMVHWSVPT 9
CMV++ VPT
Sbjct: 35 CMVNFGVPT 43


>sp|DNBI_EHV2|MAJOR DNA-binding protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 CMVHWSVPTP 10
C V+W P P
Sbjct: 612 CNVYWQPPCP 621


>sp|RDRP_RBDVR|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Raspberry bushy dwarf virus (isolate

Query: 1 CMVHWSVPT 9
C VHW++ +
Sbjct: 1659 CTVHWALSS 1667


>sp|POLA_CHPVE|POLYPROTEIN p69|Cryphonectria hypovirus 1 (strain EP713)

Query: 1 CMVHWSVPT 9
C VH+ +PT
Sbjct: 72 CQVHFELPT 80


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 4 HWSVPT 9
HWS+P+
Sbjct: 1736 HWSIPS 1741


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 4 HWSVPT 9
HWS+P+
Sbjct: 1750 HWSIPS 1755


>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)

Query: 1 CMVHW 5
C+VHW
Sbjct: 168 CLVHW 172


>sp|VF117_IIV3|UNCHARACTERIZED protein 107R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 CMVHWSVP 8
C + WSVP
Sbjct: 54 CNMFWSVP 61


>sp|RPOL_BPKMV|DNA-DIRECTED RNA polymerase|Pseudomonas phage phiKMV

Query: 2 MVHWSVPTP 10
M +W P P
Sbjct: 402 MYYWGTPNP 410


>sp|VP2_CAV26|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 4 HWSVPTP 10
H+S PTP
Sbjct: 142 HYSQPTP 148


>sp|VP2_CAVCI|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 4 HWSVPTP 10
H+S PTP
Sbjct: 142 HYSQPTP 148


>sp|VP2_CAVC1|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 4 HWSVPTP 10
H+S PTP
Sbjct: 142 HYSQPTP 148


>sp|VP2_CAV82|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 4 HWSVPTP 10
H+S PTP
Sbjct: 142 HYSQPTP 148


>sp|VP2_CAVCA|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 4 HWSVPTP 10
H+S PTP
Sbjct: 142 HYSQPTP 148


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 4 HWSVP 8
HWS+P
Sbjct: 4654 HWSMP 4658


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 4 HWSVP 8
HWS+P
Sbjct: 4654 HWSMP 4658


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 4 HWSVP 8
HWS+P
Sbjct: 4654 HWSMP 4658


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 4 HWSVP 8
HWS+P
Sbjct: 4654 HWSMP 4658


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 4 HWSVP 8
HWS+P
Sbjct: 4654 HWSMP 4658


>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VHWSVPTP 10
V W VP+P
Sbjct: 1068 VLWDVPSP 1075


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VHWSVPTP 10
V W VP+P
Sbjct: 1478 VLWDVPSP 1485


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VHWSVPTP 10
V W VP+P
Sbjct: 1478 VLWDVPSP 1485


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VHWSVPTP 10
V W VP+P
Sbjct: 1478 VLWDVPSP 1485


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 3 VHWSVPTP 10
V W VP+P
Sbjct: 1478 VLWDVPSP 1485


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VHWSVPTP 10
V W VP+P
Sbjct: 1478 VLWDVPSP 1485


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VHWSVPTP 10
V W VP+P
Sbjct: 1478 VLWDVPSP 1485


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VHWSVPTP 10
V W VP+P
Sbjct: 1478 VLWDVPSP 1485


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1 CMVHWSVPTP 10
M+HWS+ P
Sbjct: 2372 AMLHWSLILP 2381


Query: 3 VHWSVPTP 10
V W +PTP
Sbjct: 1488 VLWDIPTP 1495


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1 CMVHWSVPTP 10
M+HWS+ P
Sbjct: 2372 AMLHWSLILP 2381


Query: 3 VHWSVPTP 10
V W +PTP
Sbjct: 1488 VLWDIPTP 1495


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1 CMVHWSVPTP 10
M+HWS+ P
Sbjct: 2372 AMLHWSLILP 2381


Query: 3 VHWSVPTP 10
V W +PTP
Sbjct: 1488 VLWDIPTP 1495


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 CMVHWSVPTP 10
M+HWS+ P
Sbjct: 2372 AMLHWSLILP 2381


Query: 3 VHWSVPTP 10
V W +PTP
Sbjct: 1488 VLWDIPTP 1495


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1 CMVHWSVPTP 10
M+HWS+ P
Sbjct: 2372 AMLHWSLILP 2381


Query: 3 VHWSVPTP 10
V W +PTP
Sbjct: 1488 VLWDIPTP 1495


>sp|ENV_JEMBR|ENVELOPE glycoprotein|Jembrana disease virus (JDV)

Query: 3 VHWSVPTP 10
VHW+V P
Sbjct: 163 VHWTVQKP 170


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 VHWSVPTP 10
V W VP+P
Sbjct: 1476 VLWDVPSP 1483


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 VHWSVPTP 10
V W VP+P
Sbjct: 1476 VLWDVPSP 1483


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 VHWSVPTP 10
V W VP+P
Sbjct: 1476 VLWDVPSP 1483


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 VHWSVPTP 10
V W VP+P
Sbjct: 1476 VLWDVPSP 1483


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 VHWSVPTP 10
V W VP+P
Sbjct: 1476 VLWDVPSP 1483


>sp|GH_EHV1B|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain Ab4p)

Query: 2 MVHWSVPTP 10
M WS P P
Sbjct: 20 MAVWSTPVP 28


>sp|GH_EHV1|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain HVS25A)

Query: 2 MVHWSVPTP 10
M WS P P
Sbjct: 20 MAVWSTPVP 28


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 3 VHWSVPTP 10
V W +PTP
Sbjct: 1488 VLWDIPTP 1495


>sp|VP5_LBVAV|PROTEIN 5|Lettuce big-vein associated virus (isolate

Query: 4 HWSVPT 9
HWS+P+
Sbjct: 348 HWSIPS 353


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 3 VHWSVPTP 10
V W +PTP
Sbjct: 1488 VLWDIPTP 1495


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3 VHWSVPTP 10
V W +PTP
Sbjct: 1488 VLWDIPTP 1495


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 3 VHWSVPTP 10
V W +PTP
Sbjct: 1488 VLWDIPTP 1495


>sp|POLA_CHPVU|POLYPROTEIN p69|Cryphonectria hypovirus 1 (strain Euro7)

Query: 1 CMVHWSVPT 9
C +H+ PT
Sbjct: 72 CQIHFEFPT 80




26|SequenceR|135|126|GFLQMCMVHW

>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28

Query: 5 MCMVHW 10
MC VHW
Sbjct: 129 MCYVHW 134


>sp|LTP_MHV68|LARGE tegument protein deneddylase|Murid herpesvirus 4 (MuHV-4) (Murine

Query: 2 FLQMCMVHW 10
FL++C+ W
Sbjct: 1667 FLKLCLTMW 1675


>sp|1A_BMV|REPLICATION protein 1a|Brome mosaic virus (BMV)

Query: 1 GFLQMCMVHW 10
GFL + HW
Sbjct: 217 GFLPLLKCHW 226


>sp|NS3_BCHK9|NON-STRUCTURAL protein 3|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 4 QMCMVHW 10
Q+CMV W
Sbjct: 67 QVCMVIW 73


>sp|L_BRSVA|RNA-DIRECTED RNA polymerase L|Bovine respiratory syncytial virus (strain

Query: 3 LQMCMVHW 10
L +CM+ W
Sbjct: 277 LNVCMITW 284


>sp|LT_POVBO|LARGE T antigen|Bovine polyomavirus (BPyV) (Bos taurus

Query: 3 LQMCMVHW 10
LQ C+V W
Sbjct: 583 LQECVVKW 590


>sp|RDRP_NODAM|RNA-DIRECTED RNA polymerase|Nodamura virus (strain Mag115) (NoV)

Query: 1 GFLQMCMV 8
GFLQ C +
Sbjct: 670 GFLQYCSI 677


>sp|KITH_BPT4|THYMIDINE kinase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 FLQMCMVHW 10
++ +C HW
Sbjct: 177 YVSLCRKHW 185


>sp|UL79_SHV21|GENE 18 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 3 LQMCMVHW 10
LQ C++ W
Sbjct: 165 LQFCLIFW 172


>sp|VF93L_ASFWA|UNCHARACTERIZED membrane protein KP93L|African swine fever virus (isolate

Query: 1 GFLQMCMVHW 10
GFL M +W
Sbjct: 5 GFLSATMCYW 14




27|SequenceR|140|131|MFALFGFLQM

***** No hits found ******


28|SequenceR|145|136|WCMFIMFALF

>sp|CAPSD_CPVBM|INNER capsid protein VP1|Bombyx mori cytoplasmic polyhedrosis virus

Query: 4 FIMFALF 10
FI+FALF
Sbjct: 514 FILFALF 520


>sp|CAPSD_BPHC1|MAJOR capsid protein|Haemophilus phage HP1 (strain HP1c1)

Query: 1 WCMFIMFALF 10
W +F FA+F
Sbjct: 108 WALFDSFAIF 117


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 CMFIMFALF 10
CMF ++A+F
Sbjct: 3567 CMFDIYAVF 3575


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 2 CMFIMFALF 10
CMF ++A+F
Sbjct: 3567 CMFDIYAVF 3575




29|SequenceR|150|141|YVDGVWCMFI

>sp|Y079_NPVAC|UPF0213 protein in VLF1-GP41 intergenic|Autographa californica nuclear

Query: 1 YVDGVWCMFI 10
Y + VWC++I
Sbjct: 6 YTNKVWCVYI 15


>sp|Y079_NPVOP|UPF0213 protein ORF82|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 YVDGVWCMFI 10
Y VWC++I
Sbjct: 4 YRSKVWCVYI 13


>sp|RDRP_BTV10|RNA-DIRECTED RNA polymerase|Bluetongue virus 10 (isolate USA)

Query: 5 VWCMFI 10
VWC FI
Sbjct: 149 VWCCFI 154


>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32

Query: 2 VDGVWC 7
+DG WC
Sbjct: 142 LDGTWC 147


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 2 VDGVWCM 8
+DG WC+
Sbjct: 16 LDGSWCL 22


>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1 YVDGVWCMFI 10
YV VWC+ +
Sbjct: 631 YVGLVWCLLL 640


>sp|CHLE_MIMIV|PROBABLE cholinesterase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 DGVWC 7
DG+WC
Sbjct: 463 DGLWC 467


>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1 YVDGVWCMFI 10
+V VWCM +
Sbjct: 638 FVGLVWCMLL 647


>sp|GM_EHV1B|ENVELOPE glycoprotein M|Equine herpesvirus 1 (strain Ab4p)

Query: 2 VDGVW 6
VDGVW
Sbjct: 79 VDGVW 83




30|SequenceR|155|146|PQYVPYVDGV

>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 2 QYVPYVDGV 10
+YV Y DGV
Sbjct: 3455 EYVSYFDGV 3463


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 PQYVPYVD 8
P+Y+PY D
Sbjct: 4764 PRYLPYPD 4771


>sp|GE_GAHVM|ENVELOPE glycoprotein E|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 PQYVPYVDG 9
P+Y P VDG
Sbjct: 37 PRYPPVVDG 45


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2 QYVPYVDGV 10
+YV Y DGV
Sbjct: 3455 EYVSYFDGV 3463


>sp|VG27_SHV21|UNCHARACTERIZED gene 27 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 PQYVPYVDGV 10
PQ+VPY+ V
Sbjct: 270 PQHVPYIINV 279


>sp|CHMA_BPDPK|CHIMALLIN phage phiKZ

Query: 1 PQYVPYV 7
PQ+ PY+
Sbjct: 315 PQFTPYI 321


>sp|VPM_BPP2|TERMINASE, endonuclease subunit|Escherichia phage P2 (Bacteriophage P2)

Query: 1 PQYVPYVDGV 10
P ++P+V+GV
Sbjct: 63 PFWLPWVNGV 72


>sp|YR349_MIMIV|UNCHARACTERIZED protein R349|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 QYVPYVDGV 10
QYVP++ G+
Sbjct: 472 QYVPHIIGL 480


>sp|VP3_AHSV6|CORE protein VP3|African horse sickness virus 6

Query: 3 YVPYVDG 9
Y PY+DG
Sbjct: 17 YAPYLDG 23


>sp|POL1_CPSMV|RNA1 polyprotein|Cowpea severe mosaic virus (strain

Query: 2 QYVPYVDGV 10
QY P+V G+
Sbjct: 1216 QYDPFVGGI 1224


>sp|VP3_AHSV|CORE protein VP3|African horse sickness virus (AHSV)

Query: 3 YVPYVDG 9
Y PY+DG
Sbjct: 17 YAPYLDG 23


>sp|RPB2_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 1 PQYVPYVDGV 10
P+Y Y+D +
Sbjct: 270 PEYEKYIDAI 279


>sp|VSP1_BPLLH|STRUCTURAL protein|Lactococcus phage LL-H (Lactococcus delbrueckii

Query: 2 QYVPYVDGV 10
Q PYV+GV
Sbjct: 277 QLYPYVEGV 285


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1 PQYVPYVDGV 10
P++ +VDGV
Sbjct: 2123 PEFFSWVDGV 2132


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 PQYVPYVDGV 10
P++ +VDGV
Sbjct: 2123 PEFFSWVDGV 2132


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 1 PQYVPYVDG 9
P Y+PYV G
Sbjct: 1290 PAYLPYVLG 1298


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 PQYVPYVDGV 10
P++ +VDGV
Sbjct: 2123 PEFFSWVDGV 2132


>sp|POLS_CRPVC|STRUCTURAL polyprotein|Cricket paralysis virus (isolate

Query: 1 PQYVPY 6
P YVPY
Sbjct: 592 PSYVPY 597


>sp|NRAM_I63A3|NEURAMINIDASE A virus (strain A/Duck/Ukraine/1/1963

Query: 2 QYVPYVDG 9
+YVPY +G
Sbjct: 72 EYVPYWNG 79


>sp|Y017_HVAVE|UNCHARACTERIZED protein ORF17|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 2 QYVPYVDG 9
QY+ YVD
Sbjct: 254 QYITYVDA 261


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 PQYVPYVDGV 10
P++ +VDGV
Sbjct: 2123 PEFFSWVDGV 2132


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 1 PQYVPYVDGV 10
P++ +VDGV
Sbjct: 2123 PEFFSWVDGV 2132


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 PQYVPYVDGV 10
P++ +VDGV
Sbjct: 2123 PEFFSWVDGV 2132


>sp|HEMA_BEV|TRUNCATED non-functional hemagglutinin-esterase homolog|Berne virus (BEV)

Query: 1 PQYVPYVDG 9
PQYV DG
Sbjct: 96 PQYVKLFDG 104


>sp|P2_RDVF|MINOR outer capsid protein P2|Rice dwarf virus (isolate Fujian)

Query: 4 VPYVDG 9
VPY+DG
Sbjct: 292 VPYLDG 297




31|SequenceR|160|151|QKPGVPQYVP

>sp|GP4_PRRSS|GLYCOPROTEIN 4|Porcine reproductive and respiratory syndrome

Query: 4 GVPQYV 9
GVPQY+
Sbjct: 78 GVPQYI 83


>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 QKPGVPQYVP 10
+ PG PQ +P
Sbjct: 46 RNPGSPQLLP 55


>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 QKPGVPQYVP 10
+ PG PQ +P
Sbjct: 46 RNPGSPQLLP 55


>sp|E3GL_ADE03|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 3

Query: 2 KPGVPQY 8
+PGVPQ+
Sbjct: 80 EPGVPQW 86


>sp|E3GL_ADE1A|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 11

Query: 2 KPGVPQY 8
+PGVPQ+
Sbjct: 75 EPGVPQW 81


>sp|YL910_MIMIV|UNCHARACTERIZED protein L910|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KPGVPQYV 9
KP +PQY+
Sbjct: 81 KPFIPQYL 88


>sp|GP16_BPP22|INTERNAL virion protein gp16|Salmonella phage P22 (Bacteriophage P22)

Query: 2 KPGVPQY 8
KPG P Y
Sbjct: 581 KPGTPAY 587


>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2 KPGVPQYV 9
+PG+P Y+
Sbjct: 2 RPGLPSYL 9


>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 KPGVPQYV 9
+PG+P Y+
Sbjct: 2 RPGLPSYL 9


>sp|ENV_FFV|ENVELOPE glycoprotein gp130|Feline foamy virus (FFV) (Feline

Query: 4 GVPQYVP 10
G+P YVP
Sbjct: 813 GIPAYVP 819


>sp|END4_BPT4|ENDONUCLEASE IV|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 PGVPQYVP 10
PGV QY P
Sbjct: 153 PGVIQYTP 160


>sp|YR306_MIMIV|UNCHARACTERIZED protein R306|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KPGVPQYVP 10
KP P+Y P
Sbjct: 34 KPNNPKYAP 42


>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)

Query: 3 PGVPQY 8
PG+P+Y
Sbjct: 393 PGIPEY 398




32|SequenceR|165|156|NNYPYQKPGV

>sp|RLIG_BPTS2|RNA ligase 1|Bacteriophage TS2126

Query: 4 PYQKPGV 10
PYQ+PGV
Sbjct: 184 PYQEPGV 190


>sp|RDRP_PMMVS|REPLICASE large subunit|Pepper mild mottle virus (strain

Query: 4 PYQKP 8
PYQKP
Sbjct: 161 PYQKP 165


>sp|RDRP_PMMVJ|REPLICASE large subunit|Pepper mild mottle virus (strain

Query: 4 PYQKP 8
PYQKP
Sbjct: 161 PYQKP 165


>sp|UBC1_MIMIV|PROBABLE ubiquitin-conjugating enzyme E2 L460|Acanthamoeba polyphaga

Query: 1 NNYPYQKPGV 10
N+YPY P V
Sbjct: 64 NDYPYSSPKV 73


>sp|L_SHRV|RNA-DIRECTED RNA polymerase L|Snakehead rhabdovirus (SHRV)

Query: 3 YPYQK 7
YPYQK
Sbjct: 829 YPYQK 833


>sp|SPIKE_ADEM1|FIBER protein|Murine adenovirus A serotype 1

Query: 3 YPYQKP 8
YPYQ+P
Sbjct: 43 YPYQQP 48


>sp|T3RE_BPP1|TYPE III restriction-modification enzyme EcoPI|Escherichia phage P1

Query: 2 NYPYQKPGV 10
N P+QK GV
Sbjct: 10 NLPHQKAGV 18


>sp|VSR_MSTV|SUPPRESSOR of RNA silencing p3|Maize stripe virus (MStV)

Query: 1 NNYPYQKPGV 10
NN P+Q P +
Sbjct: 128 NNLPFQVPSI 137


>sp|YL471_MIMIV|UNCHARACTERIZED protein L471|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NNYPYQKP 8
N Y YQKP
Sbjct: 139 NGYYYQKP 146


>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)

Query: 1 NNYPYQKPGV 10
NNY +KP +
Sbjct: 205 NNYVPEKPAI 214


>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)

Query: 1 NNYPYQKPGV 10
NNY +KP +
Sbjct: 205 NNYVPEKPAI 214




33|SequenceR|170|161|RELYLNNYPY

>sp|HEMA_I84A4|HEMAGGLUTININ A virus (strain A/Gull/Astrakhan/227/1984

Query: 1 RELYLNNYPY 10
R+LY+NN PY
Sbjct: 204 RKLYVNNDPY 213


>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10

Query: 1 RELYLNNY 8
RELY+ NY
Sbjct: 135 RELYVQNY 142


>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)

Query: 1 RELYLNNY 8
RELY+N Y
Sbjct: 363 RELYINTY 370


>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 ELYLNNYP 9
ELYL +YP
Sbjct: 18 ELYLKHYP 25


>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 ELYLNNYP 9
ELYL +YP
Sbjct: 18 ELYLKHYP 25


>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 ELYLNNYP 9
ELYL +YP
Sbjct: 18 ELYLKHYP 25


>sp|UNG_FOWPN|URACIL-DNA glycosylase|Fowlpox virus (strain NVSL) (FPV)

Query: 1 RELYLNNYPY 10
+ L LNN+PY
Sbjct: 2 KTLKLNNWPY 11


>sp|LTP_EHV2|LARGE tegument protein deneddylase|Equine herpesvirus 2 (strain 86/87)

Query: 1 RELYLNNYP 9
RELYL+ P
Sbjct: 3709 RELYLHEEP 3717


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 RELYLNN 7
RELYLN+
Sbjct: 2244 RELYLNS 2250


>sp|S8_DPIRV|UNCHARACTERIZED protein S8|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)

Query: 3 LYLNNYPY 10
LY NNY Y
Sbjct: 117 LYTNNYVY 124


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 RELYLNNYPY 10
RE+ +N PY
Sbjct: 78 REIVMNTRPY 87


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 RELYLNNYPY 10
RE+ +N PY
Sbjct: 78 REIVMNTRPY 87


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 1 RELYLNNYPY 10
RE+ +N PY
Sbjct: 78 REIVMNTRPY 87


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 1 RELYLNNYPY 10
RE+ +N PY
Sbjct: 78 REIVMNTRPY 87


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 RELYLNN 7
RELYLN+
Sbjct: 2244 RELYLNS 2250


>sp|P7_PBCV1|MINOR capsid protein P7|Paramecium bursaria Chlorella virus 1

Query: 3 LYLNNY 8
LY+NNY
Sbjct: 31 LYINNY 36


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 1 RELYLNNYP 9
R+ YLN YP
Sbjct: 678 RQQYLNLYP 686


>sp|HEMA_I84A2|HEMAGGLUTININ A virus (strain A/Whale/Maine/328/1984

Query: 1 RELYLNNYPY 10
+ LY+N+ PY
Sbjct: 205 KSLYVNSDPY 214


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 RELYLNNYPY 10
RE+ +N PY
Sbjct: 78 REIVMNTRPY 87


>sp|RDRP_TNVA|RNA-DIRECTED RNA polymerase|Tobacco necrosis virus (strain A)

Query: 2 ELYLNNYP 9
E YL +YP
Sbjct: 448 EFYLRDYP 455


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 RELYLNNYPY 10
RE+ +N PY
Sbjct: 78 REIVMNTRPY 87


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 1 RELYLNNYPY 10
RE+ +N PY
Sbjct: 78 REIVMNTRPY 87


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 1 RELYLNNYPY 10
RE+ +N PY
Sbjct: 78 REIVMNTRPY 87


>sp|POL1_BRSV|RNA1 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 2 ELYLNNYP 9
ELYL+N P
Sbjct: 1943 ELYLHNDP 1950


>sp|POL2_ARMVS|RNA2 polyprotein|Arabis mosaic virus (isolate Syrah)

Query: 2 ELYLNNY 8
ELY+ NY
Sbjct: 1076 ELYIGNY 1082


>sp|HEMA_I77AF|HEMAGGLUTININ A virus (strain A/Gull/Maryland/704/1977

Query: 1 RELYLNNYPY 10
+ LY+N+ PY
Sbjct: 205 KTLYVNSDPY 214




34|SequenceR|175|166|SPDGGRELYL

>sp|VP4_ROTW3|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 1 SPDGGRELY 9
+P+GGRE Y
Sbjct: 454 NPNGGREYY 462


>sp|VP4_ROTB6|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 SPDGGRELY 9
+P+GGRE Y
Sbjct: 454 NPNGGREYY 462


>sp|VP4_ROTBV|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Cow/United

Query: 1 SPDGGRELY 9
+P+GGRE Y
Sbjct: 454 NPNGGREYY 462


>sp|VP4_ROTB4|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 1 SPDGGRELY 9
+P+GGRE Y
Sbjct: 454 NPNGGREYY 462


>sp|VP4_ROT18|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 SPDGGRELY 9
+P+GGR+ Y
Sbjct: 454 NPNGGRDFY 462


>sp|VP4_ROTBU|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 1 SPDGGRELY 9
+P+GG+E Y
Sbjct: 454 NPNGGKEYY 462


>sp|POL1_BRSV|RNA1 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 2 PDGGRELYL 10
P GGR LY+
Sbjct: 1011 PQGGRGLYV 1019


>sp|TOPL_BPT4|DNA topoisomerase large subunit|Enterobacteria phage T4 (Bacteriophage

Query: 1 SPDGGREL 8
SPDG R+L
Sbjct: 258 SPDGFRQL 265


>sp|RDRP_RGDV|RNA-DIRECTED RNA polymerase P1|Rice gall dwarf virus (RGDV)

Query: 1 SPDGGREL 8
+P+GGR+L
Sbjct: 328 NPNGGRDL 335


>sp|CAPSP_BPT4|CAPSID vertex protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 SPDGGRELY 9
+P+ GR LY
Sbjct: 243 APEAGRSLY 251


>sp|CAPSP_BPAR1|CAPSID vertex protein|Escherichia phage AR1 (Bacteriophage AR1)

Query: 1 SPDGGRELY 9
+P+ GR LY
Sbjct: 243 APEAGRSLY 251


>sp|POLG_ASGVK|GENOME polyprotein|Apple stem grooving virus (strain

Query: 5 GRELYL 10
GRELYL
Sbjct: 1915 GRELYL 1920


>sp|VP4_ROTD9|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Dog/United

Query: 1 SPDGGRELY 9
+P+ GRE Y
Sbjct: 454 NPNNGREYY 462


>sp|VP4_ROTME|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 SPDGGRELY 9
+P+ GRE Y
Sbjct: 454 NPNNGREYY 462


>sp|VP4_ROTCU|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Dog/United

Query: 1 SPDGGRELY 9
+P+ GRE Y
Sbjct: 454 NPNNGREYY 462


>sp|VP4_ROTF6|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 SPDGGRELY 9
+P+ GRE Y
Sbjct: 454 NPNNGREYY 462


>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 SPDGGRELY 9
+P+ GRE Y
Sbjct: 454 NPNNGREYY 462


>sp|DPOL_OSHVF|DNA polymerase|Ostreid herpesvirus 1 (isolate France)

Query: 2 PDGGRELYL 10
P G +ELY+
Sbjct: 90 PQGPKELYM 98


>sp|CAPSD_BYVU|CAPSID protein|Beet yellows virus (isolate Ukraine)

Query: 4 GGRELYL 10
GG+ELYL
Sbjct: 85 GGKELYL 91


>sp|SHUT_ADECR|SHUTOFF protein|Canine adenovirus serotype 1 (strain

Query: 2 PDGGREL 8
PDGG+E+
Sbjct: 246 PDGGQEV 252


>sp|SHUT_ADECC|SHUTOFF protein|Canine adenovirus serotype 1 (strain

Query: 2 PDGGREL 8
PDGG+E+
Sbjct: 246 PDGGQEV 252


>sp|CAPSD_BPKP2|MAJOR capsid protein|Pseudomonas phage KPP25 (Bacteriophage KPP25)

Query: 3 DGGRELY 9
DGG E+Y
Sbjct: 229 DGGEEMY 235


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 1 SPDGGRE 7
SP GGRE
Sbjct: 2299 SPSGGRE 2305


>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain

Query: 2 PDGGRELYL 10
P+GG LY+
Sbjct: 1013 PEGGHGLYV 1021




35|SequenceR|180|171|REPEKSPDGG

>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)

Query: 1 REPEKSPD 8
REPE+SPD
Sbjct: 326 REPEESPD 333


>sp|TATR_NPVCF|TRANS-ACTIVATING transcriptional regulatory protein|Choristoneura fumiferana nuclear

Query: 1 REPEKSPDGG 10
R PE +PD G
Sbjct: 382 RFPENNPDNG 391


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 1 REPEKSPDGG 10
REPE +P GG
Sbjct: 23 REPEVAPPGG 32


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 1 REPEKSPDGG 10
REPE +P GG
Sbjct: 23 REPEVAPPGG 32


>sp|POLS_BSNV|STRUCTURAL polyprotein|Blotched snakehead virus (BSNV) (Channa

Query: 1 REPEKSPDG 9
REP +PDG
Sbjct: 514 REPNSTPDG 522


>sp|Y091B_ABVP|UNCHARACTERIZED protein ORF91b|Acidianus bottle-shaped virus (isolate

Query: 1 REPEKSPD 8
REPEK+ D
Sbjct: 17 REPEKADD 24


>sp|HELI1_TNAVC|PUTATIVE ATP-dependent RNA helicase|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 1 REPEKSPD 8
REP+KS D
Sbjct: 563 REPDKSVD 570


>sp|VGCR_ELHVK|G-PROTEIN coupled receptor|Elephantid herpesvirus 1 (isolate Asian

Query: 2 EPEKSPDGG 10
+P KSP GG
Sbjct: 351 KPLKSPGGG 359


>sp|CEP2_SHV21|CYTOPLASMIC envelopment protein 2|Saimiriine herpesvirus 2 (strain 11)

Query: 3 PEKSPDG 9
PE+ PDG
Sbjct: 143 PERLPDG 149


>sp|MVP_TOBSV|MOVEMENT protein|Tobacco streak virus (strain WC)

Query: 2 EPEKSPDGG 10
EPEK D G
Sbjct: 251 EPEKDDDAG 259


>sp|RDRP_AQRVA|RNA-DIRECTED RNA polymerase VP2|Aquareovirus A (isolate Chum

Query: 1 REPEKSPD 8
R PE SPD
Sbjct: 926 RRPEPSPD 933


>sp|IE61_CHV9D|E3 ubiquitin-protein ligase IE61|Cercopithecine herpesvirus 9 (strain

Query: 3 PEKSPDGG 10
P KSPDGG
Sbjct: 369 PIKSPDGG 376


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 3 PEKSPDGG 10
P+K P GG
Sbjct: 1969 PQKMPKGG 1976




36|SequenceR|186|176|IEYHVVREPEK

>sp|ENV_FIVT2|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate TM2)

Query: 1 IEYHVVREPE 10
I+Y VV++PE
Sbjct: 584 IKYQVVKQPE 593


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 IEYHVVREP 9
+ +HVVR+P
Sbjct: 296 VAWHVVRDP 304


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 IEYHVVREP 9
+ +HVVR+P
Sbjct: 296 VAWHVVRDP 304


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 IEYHVVREP 9
+ +HVVR+P
Sbjct: 296 VAWHVVRDP 304


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 1 IEYHVVREP 9
+ +HVVR+P
Sbjct: 296 VAWHVVRDP 304


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 1 IEYHVVREP 9
+ +HVVR+P
Sbjct: 296 VAWHVVRDP 304


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 IEYHVVREP 9
+ +HVVR+P
Sbjct: 296 VAWHVVRDP 304


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 IEYHVVREP 9
+ +HVVR+P
Sbjct: 296 VAWHVVRDP 304


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 IEYHVVREP 9
+ +HVVR+P
Sbjct: 296 VAWHVVRDP 304


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 1 IEYHVVREP 9
+ +HVVR+P
Sbjct: 296 VAWHVVRDP 304


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 1 IEYHVVREP 9
+ +HVVR+P
Sbjct: 296 VAWHVVRDP 304


>sp|ENV_FIVSD|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain San

Query: 2 EYHVVREPE 10
+Y VV++PE
Sbjct: 584 KYQVVKQPE 592


>sp|RDRP_LDCPR|RNA-DIRECTED RNA polymerase VP2|Lymantria dispar cypovirus 1 (isolate

Query: 1 IEYHVVREPEK 11
+EYH V P +
Sbjct: 1137 VEYHYVLSPRQ 1147


>sp|36010_ASFWA|PROTEIN MGF 360-10L|African swine fever virus (isolate

Query: 1 IEYHVVRE 8
I+YHV+ E
Sbjct: 20 IDYHVILE 27


>sp|GB_ALHV1|ENVELOPE glycoprotein B|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 EYHVVREPE 10
+YH ++PE
Sbjct: 800 DYHASKQPE 808


>sp|POLG_BVY3|GENOME polyprotein|Blackberry virus Y (isolate Blackberry

Query: 3 YHVVREP 9
YH VR P
Sbjct: 258 YHAVRNP 264




THE END