NDUB7_HUMAN Blast Output
Archaea
1|Sequence|1|10|MGAHLVRRYL

>sp|MAP2_SACS2|METHIONINE aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MGAHLVRRY 9
+G HL+RRY
Sbjct: 153 LGGHLIRRY 161


>sp|Y288_METJA|UNCHARACTERIZED protein MJ0288|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MGAHLVRRYL 10
+GA L+RR+L
Sbjct: 169 LGAMLIRRHL 178


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 AHLVRRYL 10
AHL+ RYL
Sbjct: 81 AHLLSRYL 88


>sp|PROB_NATPD|GLUTAMATE 5-kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 AHLVRRY 9
+HL+RRY
Sbjct: 102 SHLMRRY 108


>sp|PGK2_METAC|PHOSPHOGLYCERATE kinase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 AHLVRRYL 10
AHL+ RYL
Sbjct: 81 AHLLSRYL 88


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MGAHLVRRYL 10
+G+ LVR+Y+
Sbjct: 203 VGSELVRKYI 212


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 MGAHLVRRYL 10
+G+ LVR+Y+
Sbjct: 203 VGSELVRKYI 212


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 HLVRRY 9
HL+RRY
Sbjct: 347 HLLRRY 352


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MGAHLVRRYL 10
+G+ LVR+Y+
Sbjct: 206 VGSELVRKYI 215


>sp|Y1562_METJA|PUTATIVE membrane protein MJ1562|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GAHLVRRY 9
G HL+ RY
Sbjct: 289 GIHLMHRY 296


>sp|ARLY_PYRCJ|ARGININOSUCCINATE lyase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GAHLVRRY 9
G LVRRY
Sbjct: 11 GGDLVRRY 18


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 2 GAHLVRRYL 10
G HLV YL
Sbjct: 440 GLHLVTEYL 448


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 3 AHLVRRYL 10
AHL+ YL
Sbjct: 133 AHLIEEYL 140




2|Sequence|6|15|VRRYLGDASV

>sp|AATE_PYRFU|A-TYPE ATP synthase subunit E|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VRRYLGDASV 10
+RR LGD S+
Sbjct: 141 IRRELGDVSI 150


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RRYLGD 7
RRY+GD
Sbjct: 170 RRYIGD 175


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VRRYLGDAS 9
V++Y+GD S
Sbjct: 230 VQKYIGDGS 238


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VRRYLGDAS 9
V++Y+GD S
Sbjct: 230 VQKYIGDGS 238


>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VRRYLGD 7
V RYLGD
Sbjct: 280 VSRYLGD 286


>sp|PURA_METM7|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C7 /

Query: 1 VRRYLGDAS 9
+ +YLGD S
Sbjct: 152 ISKYLGDVS 160


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 VRRYLGDASV 10
V R+LGD V
Sbjct: 417 VERHLGDGDV 426


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 1 VRRYLGDASV 10
VRR+ GDA V
Sbjct: 184 VRRFRGDAWV 193


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VRRYLGDAS 9
+ +YLGD S
Sbjct: 152 ISKYLGDVS 160


>sp|FNO_ARCFU|F420-DEPENDENT NADP reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RRYLGDASV 10
RR GDAS+
Sbjct: 45 RRIAGDASI 53


>sp|PURA_METM5|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C5 /

Query: 1 VRRYLGDAS 9
+ +YLGD S
Sbjct: 152 ISKYLGDVS 160


>sp|RNZ_HALSA|RIBONUCLEASE Z|Halobacterium salinarum (strain ATCC 700922

Query: 3 RYLGDAS 9
RY GDAS
Sbjct: 272 RYAGDAS 278


>sp|RNZ_HALS3|RIBONUCLEASE Z|Halobacterium salinarum (strain ATCC 29341

Query: 3 RYLGDAS 9
RY GDAS
Sbjct: 272 RYAGDAS 278




3|Sequence|11|20|GDASVEPDPL

>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 2 DASVEPDPL 10
DASVEP PL
Sbjct: 556 DASVEPTPL 564


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 2 DASVEPDPL 10
DASVEP PL
Sbjct: 556 DASVEPTPL 564


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDASVEPDPL 10
G+AS+ PD L
Sbjct: 1483 GNASIFPDKL 1492


>sp|AGLP_HALVD|HEXURONIC acid methyltransferase AglP|Haloferax volcanii (strain ATCC 29605

Query: 1 GDASVEPDPL 10
GD S EP P+
Sbjct: 126 GDISFEPSPI 135


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 3 ASVEPDPL 10
A+VEPDP+
Sbjct: 53 ANVEPDPV 60


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 5 VEPDPL 10
VEPDPL
Sbjct: 72 VEPDPL 77


>sp|RL10E_HALLT|LARGE ribosomal subunit protein uL16|Halorubrum lacusprofundi (strain

Query: 1 GDASVEPD 8
GD S EPD
Sbjct: 37 GDLSAEPD 44


>sp|GGR_ARCFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDASVEPDPL 10
GDA+ DP+
Sbjct: 273 GDAAYHADPI 282


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 GDASVEPDP 9
G SVEP P
Sbjct: 275 GRRSVEPQP 283


>sp|NNRE_CENSY|NAD(P)H-HYDRATE epimerase|Cenarchaeum symbiosum (strain A)

Query: 2 DASVEPDPL 10
DASV PD +
Sbjct: 112 DASVSPDAI 120


>sp|GGR2_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 GDASVEPDPL 10
GDA+ + DP+
Sbjct: 278 GDAARQSDPI 287


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 GDASVEPD 8
GD S+EP+
Sbjct: 621 GDESLEPE 628


>sp|Y1047_ARCFU|UNCHARACTERIZED protein AF_1047|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DASVEPD 8
DA+VEPD
Sbjct: 81 DANVEPD 87


>sp|GGR_METAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GDASVEPDPL 10
GDA+ + DP+
Sbjct: 280 GDAARQSDPI 289


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 SVEPDPL 10
+VEPDP
Sbjct: 602 AVEPDPF 608


>sp|GGR_METBF|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GDASVEPDPL 10
GDA+ + DP+
Sbjct: 280 GDAARQSDPI 289


>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GDASVEPDPL 10
GDA+ + DP+
Sbjct: 280 GDAARQSDPI 289


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 4 SVEPDPL 10
+VEPDP
Sbjct: 602 AVEPDPF 608


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GDASVEPDPL 10
GDA+ + DP+
Sbjct: 276 GDAARQSDPI 285


>sp|GGR2_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GDASVEPDPL 10
GDA+ + DPL
Sbjct: 272 GDAAGQVDPL 281




4|Sequence|16|25|EPDPLQMPTF

>sp|HEM1_NATPD|GLUTAMYL-TRNA reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EPDPLQMPT 9
EP+P ++PT
Sbjct: 416 EPEPTELPT 424


>sp|PYRF_NATPD|OROTIDINE 5'-phosphate decarboxylase|Natronomonas pharaonis (strain ATCC

Query: 1 EPDPLQMPTF 10
+PDP ++P F
Sbjct: 23 DPDPDRLPEF 32


>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PDPLQMPTF 10
PDPL +P F
Sbjct: 307 PDPLDIPEF 315


>sp|PYRF_HALLT|OROTIDINE 5'-phosphate decarboxylase|Halorubrum lacusprofundi (strain ATCC

Query: 1 EPDPLQMPTF 10
+PDP ++P F
Sbjct: 23 DPDPNRLPEF 32


>sp|RL18_STAMF|LARGE ribosomal subunit protein uL18|Staphylothermus marinus (strain ATCC

Query: 3 DPLQMPT 9
DP Q+PT
Sbjct: 177 DPTQLPT 183


>sp|MOAA_HALWD|PROBABLE GTP 3',8-cyclase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DPLQMPTF 10
DP++ PTF
Sbjct: 240 DPVENPTF 247


>sp|VORA_METTM|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter marburgensis

Query: 2 PDPLQMPTF 10
PDP+ P F
Sbjct: 286 PDPVDDPEF 294


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 EPDPLQMPTF 10
+P+P+++P F
Sbjct: 362 KPEPVRVPGF 371


>sp|VORA_METTH|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter thermautotrophicus

Query: 2 PDPLQMPTF 10
PDP+ P F
Sbjct: 286 PDPVDDPEF 294


>sp|G3P_HALVA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula vallismortis (Halobacterium

Query: 1 EPDPLQMP 8
E DP Q+P
Sbjct: 81 ETDPTQLP 88


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 2 PDPLQMPT 9
P+ L+MPT
Sbjct: 162 PEVLEMPT 169


>sp|NNR_METHJ|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanospirillum hungatei JF-1

Query: 1 EPDPLQMPT 9
EPD + +PT
Sbjct: 276 EPDIIHVPT 284




5|Sequence|21|30|QMPTFPPDYG

>sp|TRUA_METJA|TRNA pseudouridine synthase A|Methanocaldococcus jannaschii (strain ATCC

Query: 2 MPTFPPD 8
+PTFPP+
Sbjct: 204 VPTFPPE 210


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MPTFPPDY 9
MPT P DY
Sbjct: 231 MPTSPADY 238


>sp|CDPAS_METBF|CDP-ARCHAEOL synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 MPTFPPDY 9
MP F PDY
Sbjct: 71 MPVFGPDY 78


>sp|CDPAS_METAC|CDP-ARCHAEOL synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QMPTFPPDYG 10
+MPTF P+Y
Sbjct: 70 KMPTFGPNYA 79


>sp|RF1_HALSA|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 4 TFPPDYG 10
TFPPD G
Sbjct: 87 TFPPDNG 93


>sp|RF1_HALS3|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 4 TFPPDYG 10
TFPPD G
Sbjct: 87 TFPPDNG 93


>sp|CDPAS_METMA|CDP-ARCHAEOL synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QMPTFPPDY 9
+MP F PDY
Sbjct: 70 EMPGFGPDY 78


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 1 QMPTFPP 7
QMP +PP
Sbjct: 221 QMPFYPP 227


>sp|Y136_ARCFU|UNCHARACTERIZED protein AF_0136|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FPPDYG 10
F PDYG
Sbjct: 21 FKPDYG 26


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 FPPDYG 10
FP DYG
Sbjct: 94 FPEDYG 99


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QMPTFP 6
+MPTFP
Sbjct: 152 RMPTFP 157


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 QMPTFPPDY 9
++P FP D+
Sbjct: 321 EVPLFPADF 329


>sp|RF1_HALWD|PEPTIDE chain release factor subunit|Haloquadratum walsbyi (strain DSM

Query: 4 TFPPDYG 10
T+PPD G
Sbjct: 87 TYPPDNG 93


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC

Query: 5 FPPDYG 10
FPPD G
Sbjct: 88 FPPDNG 93


>sp|Y687_METJA|UNCHARACTERIZED protein MJ0687|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FPPDYG 10
F PDYG
Sbjct: 112 FNPDYG 117


>sp|APGM_METMJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanoculleus marisnigri (strain ATCC

Query: 2 MPTFPPDYG 10
+P FP YG
Sbjct: 237 LPQFPERYG 245


>sp|RTCA_DESA1|RNA 3'-terminal phosphate cyclase|Desulfurococcus amylolyticus (strain

Query: 1 QMPTFPPD 8
++ T+PPD
Sbjct: 227 EIETYPPD 234


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 2 MPTFPPDYG 10
MPT+ D+G
Sbjct: 439 MPTYAIDHG 447


>sp|MTAP_HYPBU|S-METHYL-5'-THIOADENOSINE phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 2 MPTFPP 7
MP FPP
Sbjct: 1 MPDFPP 6


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 3 PTFPPDY 9
P F PDY
Sbjct: 490 PVFLPDY 496


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 3 PTFPPDY 9
P F PDY
Sbjct: 490 PVFLPDY 496




6|Sequence|26|35|PPDYGFPERK

>sp|RLME_HALSA|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum (strain

Query: 2 PDYGFPERK 10
P+YGF ER+
Sbjct: 248 PNYGFAERR 256


>sp|RLME_HALS3|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum (strain

Query: 2 PDYGFPERK 10
P+YGF ER+
Sbjct: 248 PNYGFAERR 256


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 3 DYGFPER 9
DYGFP R
Sbjct: 300 DYGFPRR 306


>sp|RFCL_PYRIL|REPLICATION factor C large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PP--DYGFPER 9
PP YGFP+R
Sbjct: 343 PPFIKYGFPQR 353


>sp|SYFA_METMP|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain DSM 14266

Query: 3 DYGFPERK 10
D+G PERK
Sbjct: 70 DFGIPERK 77


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PDYGFPER 9
P YG PER
Sbjct: 47 PVYGIPER 54


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 2 PDYGFPER 9
P YG PER
Sbjct: 47 PVYGIPER 54


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PP--DYGFPER 9
PP YGFP+R
Sbjct: 343 PPFIKYGFPQR 353


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PP--DYGFPER 9
PP YGFP+R
Sbjct: 343 PPFIKYGFPQR 353


>sp|RFCL_PYRNV|REPLICATION factor C large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PP--DYGFPER 9
PP YGFP+R
Sbjct: 343 PPFIKYGFPQR 353


>sp|Y1398_METMP|UNCHARACTERIZED metallohydrolase MMP1398|Methanococcus maripaludis (strain DSM

Query: 2 PDYGFPE 8
PD+G PE
Sbjct: 184 PDFGMPE 190


>sp|DCDB_METJA|DCTP deaminase, dUMP-forming|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PPDYGFPERK 10
P D G+ ERK
Sbjct: 172 PADVGYSERK 181


>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PP--DYGFPER 9
PP YGFP+R
Sbjct: 342 PPFIRYGFPQR 352


>sp|MTIP_METJA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanocaldococcus jannaschii

Query: 3 DYGFPERK 10
+YGF ERK
Sbjct: 232 NYGFGERK 239


>sp|SYFA_METVS|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus vannielii (strain ATCC 35089

Query: 5 GFPERK 10
GFPERK
Sbjct: 72 GFPERK 77


>sp|RL21_AERPE|LARGE ribosomal subunit protein eL21|Aeropyrum pernix (strain ATCC

Query: 2 PDYGFPERK 10
PD+G P R+
Sbjct: 51 PDWGMPHRR 59


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 3 DYGFPERK 10
D G PERK
Sbjct: 70 DLGIPERK 77


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 2 PDYGFP 7
PD+GFP
Sbjct: 29 PDWGFP 34


>sp|PGK_NATPD|PHOSPHOGLYCERATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PPDYGFPER 9
P GFPER
Sbjct: 158 PSVVGFPER 166


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PDYGFPER 9
PDY F ER
Sbjct: 281 PDYAFLER 288


>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PDYGF 6
PDYGF
Sbjct: 228 PDYGF 232


>sp|DCDB_METMP|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain DSM 14266

Query: 1 PPDYGFPERK 10
P D G+ +RK
Sbjct: 172 PADIGYSDRK 181


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 1 PPDYGFPE 8
PP + FP+
Sbjct: 342 PPKWSFPD 349


>sp|BLH_HALSA|PROBABLE beta-carotene 15,15'-dioxygenase Blh|Halobacterium salinarum

Query: 2 PDYGFPER 9
P GFPER
Sbjct: 160 PLLGFPER 167


>sp|DCDB_METM6|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C6 /

Query: 1 PPDYGFPERK 10
P D G+ +RK
Sbjct: 172 PADIGYSDRK 181


>sp|DCDB_METM7|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C7 /

Query: 1 PPDYGFPERK 10
P D G+ +RK
Sbjct: 172 PADVGYSDRK 181


>sp|DCDB_METVS|DCTP deaminase, dUMP-forming|Methanococcus vannielii (strain ATCC 35089

Query: 1 PPDYGFPERK 10
P D G+ +RK
Sbjct: 172 PADIGYSDRK 181


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 2 PDYGFP 7
PDYG P
Sbjct: 19 PDYGCP 24


>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PPDYGFP 7
PP+ GFP
Sbjct: 28 PPEGGFP 34


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 1 PPDYGFP 7
PPD FP
Sbjct: 19 PPDVNFP 25


>sp|HPRL3_HALTV|HGPRTASE-LIKE protein 3|Haloterrigena turkmenica (strain ATCC 51198

Query: 4 YGFPE 8
YGFPE
Sbjct: 91 YGFPE 95


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei

Query: 1 PPDYGFP 7
PPD FP
Sbjct: 19 PPDANFP 25


>sp|DHYS_METTH|PROBABLE deoxyhypusine synthase|Methanothermobacter thermautotrophicus

Query: 3 DYGFPERK 10
DYGF + K
Sbjct: 104 DYGFDDEK 111


>sp|CARA_SACS2|CARBAMOYL phosphate synthase small chain|Saccharolobus solfataricus (strain

Query: 3 DYGFPERK 10
+YG PE+K
Sbjct: 65 NYGVPEKK 72


>sp|IPYR_HALSA|INORGANIC pyrophosphatase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PPDYGF 6
P DYGF
Sbjct: 54 PSDYGF 59




7|Sequence|31|40|FPERKEREMV

>sp|Y017_METJA|UNCHARACTERIZED protein MJ0017|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PERKEREMV 10
PERKER ++
Sbjct: 73 PERKERNLI 81


>sp|Y1466_METJA|UNCHARACTERIZED protein MJ1466|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PERKEREMV 10
PERKER ++
Sbjct: 73 PERKERNLI 81


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 FPERKERE 8
+PERK++E
Sbjct: 215 YPERKKKE 222


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FPERKERE 8
+PERK++E
Sbjct: 208 YPERKKKE 215


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 FPERKERE 8
+PERK++E
Sbjct: 215 YPERKKKE 222


>sp|THIE_ARCFU|THIAMINE-PHOSPHATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PERKEREMV 10
PER RE+V
Sbjct: 192 PERAARELV 200


>sp|DNLI_PYRFU|DNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FPERKEREM 9
FPE ERE+
Sbjct: 50 FPEWDEREL 58


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 FPERKEREM 9
FPE ERE+
Sbjct: 50 FPEWDEREL 58


>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 1 FPERKEREM 9
FPE ERE+
Sbjct: 50 FPEWDEREL 58


>sp|DNLI_PYRHO|DNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FPERKEREM 9
FPE ERE+
Sbjct: 50 FPEWDEREL 58


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 1 FPERKEREMV 10
FPE K EMV
Sbjct: 616 FPEEKIWEMV 625


>sp|RIBL_METVM|FAD synthase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 1 FPERKEREMV 10
PE + REMV
Sbjct: 58 IPENQRREMV 67


>sp|DNAG_METAR|DNA primase DnaG|Methanocella arvoryzae (strain DSM 22066

Query: 2 PERKERE 8
P RKERE
Sbjct: 383 PARKERE 389




8|Sequence|36|45|EREMVATQQE

***** No hits found ******


9|Sequence|41|50|ATQQEMMDAQ

>sp|RNZ_METMA|RIBONUCLEASE Z|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ATQQEMMDAQ 10
TQQ+MM A+
Sbjct: 39 GTQQQMMRAK 48


>sp|RNZ_METAC|RIBONUCLEASE Z|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ATQQEMMDAQ 10
TQQ+MM A+
Sbjct: 39 GTQQQMMRAK 48


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TQQEMMDA 9
T +EMMDA
Sbjct: 209 TVEEMMDA 216


>sp|AATC_METAC|A-TYPE ATP synthase subunit C|Methanosarcina acetivorans (strain ATCC

Query: 1 ATQQEMMDA 9
AT QE++DA
Sbjct: 160 ATYQEIIDA 168


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 1 ATQQEMMDA 9
+T+Q+M+DA
Sbjct: 149 STRQDMIDA 157




10|Sequence|46|55|MMDAQLRLQL

***** No hits found ******


11|Sequence|51|60|LRLQLRDYCA

>sp|GCSPA_SULAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfolobus

Query: 3 LQLRDYCA 10
LQL DYCA
Sbjct: 416 LQLNDYCA 423


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 1 LRLQLRDY 8
LRL+LRDY
Sbjct: 256 LRLRLRDY 263


>sp|DHYS_IGNH4|PROBABLE deoxyhypusine synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LRLQLRDYC 9
L+LQ +D+C
Sbjct: 206 LKLQGKDFC 214


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius

Query: 5 LRDYC 9
LRDYC
Sbjct: 88 LRDYC 92




12|Sequence|56|65|RDYCAHHLIR

>sp|TRUD_METBU|PROBABLE tRNA pseudouridine synthase D|Methanococcoides burtonii (strain

Query: 1 RDYCAHHLIR 10
R++ HHLIR
Sbjct: 58 RNWETHHLIR 67


>sp|TRUD_METMA|PROBABLE tRNA pseudouridine synthase D|Methanosarcina mazei (strain ATCC

Query: 1 RDYCAHHLIR 10
RD+ HHL R
Sbjct: 57 RDWDTHHLTR 66


>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain

Query: 1 RDYCAHHLIR 10
RD+ HHL R
Sbjct: 57 RDWDTHHLTR 66


>sp|RPO8_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo8|Sulfolobus acidocaldarius (strain

Query: 1 RDYCAH 6
+D+CAH
Sbjct: 63 KDFCAH 68


>sp|RL15_METMA|LARGE ribosomal subunit protein uL15|Methanosarcina mazei (strain ATCC

Query: 4 CAHHLIR 10
C HH +R
Sbjct: 35 CKHHFVR 41


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 YCAHH 7
YC HH
Sbjct: 26 YCGHH 30


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 1 RDYCAH 6
RD+C H
Sbjct: 167 RDFCTH 172


>sp|RL15_METBF|LARGE ribosomal subunit protein uL15|Methanosarcina barkeri (strain

Query: 4 CAHHLIR 10
C HH +R
Sbjct: 35 CKHHFVR 41


>sp|RL15_METAC|LARGE ribosomal subunit protein uL15|Methanosarcina acetivorans (strain

Query: 4 CAHHLIR 10
C HH +R
Sbjct: 35 CKHHFVR 41


>sp|TRUD_METAC|PROBABLE tRNA pseudouridine synthase D|Methanosarcina acetivorans (strain

Query: 1 RDYCAHHLIR 10
RD+ HH R
Sbjct: 60 RDWDTHHFTR 69


>sp|Y021_PYRIL|UPF0282 protein Pisl_0021|Pyrobaculum islandicum (strain DSM 4184

Query: 5 AHHLIR 10
AHHL+R
Sbjct: 239 AHHLLR 244


>sp|Y1056_PYRAR|UPF0282 protein Pars_1056|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 AHHLIR 10
AHHL+R
Sbjct: 239 AHHLLR 244


>sp|THYX_THEKO|FLAVIN-DEPENDENT thymidylate synthase|Thermococcus kodakarensis (strain ATCC

Query: 4 CAHHLIR 10
C+H L+R
Sbjct: 77 CSHQLVR 83


>sp|Y934_PYRNV|UPF0282 protein Tneu_0934|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 AHHLIR 10
AHHL+R
Sbjct: 239 AHHLLR 244


>sp|PYRC_SULAC|DIHYDROOROTASE acidocaldarius (strain ATCC 33909

Query: 2 DYCAHHLI 9
D AHHL+
Sbjct: 211 DITAHHLV 218


>sp|Y1499_ARCFU|UNCHARACTERIZED protein AF_1499|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RDYCAH 6
RDY AH
Sbjct: 69 RDYAAH 74


>sp|PGMI_THEAC|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma acidophilum

Query: 2 DYCAHHLIR 10
DY +HL R
Sbjct: 282 DYVTYHLAR 290


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 CAHHL 8
CAHH+
Sbjct: 459 CAHHI 463


>sp|Y1546_PYRCJ|UPF0282 protein Pcal_1546|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 AHHLIR 10
AHHL+R
Sbjct: 238 AHHLLR 243


>sp|GCH1_SULTO|GTP cyclohydrolase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 CAHHLI 9
C HHL+
Sbjct: 88 CEHHLL 93


>sp|GCH1_SULAC|GTP cyclohydrolase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 CAHHLI 9
C HHL+
Sbjct: 89 CEHHLL 94


>sp|GCH1_CALMQ|GTP cyclohydrolase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 CAHHLI 9
C HHL+
Sbjct: 73 CEHHLL 78


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 RDYCAHHL 8
RDY A H+
Sbjct: 345 RDYVARHI 352


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 RDYCAHHL 8
RDY A H+
Sbjct: 345 RDYVARHI 352


>sp|THYX_THEON|FLAVIN-DEPENDENT thymidylate synthase|Thermococcus onnurineus (strain NA1)

Query: 4 CAHHLIR 10
C+H L+R
Sbjct: 77 CSHQLVR 83


>sp|GCH1_PYRAE|GTP cyclohydrolase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 CAHHLI 9
C HHL+
Sbjct: 81 CEHHLL 86


>sp|GCH1_HYPBU|GTP cyclohydrolase 1|Hyperthermus butylicus (strain DSM 5456

Query: 4 CAHHLI 9
C HHL+
Sbjct: 73 CEHHLL 78


>sp|GCH1_PYRNV|GTP cyclohydrolase 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 CAHHLI 9
C HHL+
Sbjct: 81 CEHHLL 86




13|Sequence|61|70|HHLIRLLKCK

***** No hits found ******


14|Sequence|66|75|LLKCKRDSFP

>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 CKRDSFP 10
C RD FP
Sbjct: 183 CPRDEFP 189


>sp|CHEB2_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina

Query: 2 LKCKRDSFP 10
L+C RDS P
Sbjct: 137 LECMRDSEP 145


>sp|TRUA_THEVO|TRNA pseudouridine synthase A|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LKCKRDSF 9
+KC R+SF
Sbjct: 149 VKCHRESF 156




15|Sequence|71|80|RDSFPNFLAC

>sp|AROA_METST|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 3 SFPNFL 8
SFPNFL
Sbjct: 412 SFPNFL 417


>sp|ACDG2_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 RDSFPNFL 8
+DSF NFL
Sbjct: 249 KDSFTNFL 256


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RDSFPN 6
RD+FPN
Sbjct: 938 RDTFPN 943


>sp|Y1556_METMJ|UPF0200 protein Memar_1556|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RDSFPNF 7
RD FP+F
Sbjct: 98 RDHFPDF 104


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 3 SFPNFL 8
SFPNF+
Sbjct: 420 SFPNFI 425


>sp|AROA_KORCO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 DSFPNFL 8
DS+P+FL
Sbjct: 403 DSYPSFL 409


>sp|TRUD_THESM|PROBABLE tRNA pseudouridine synthase D|Thermococcus sibiricus (strain DSM

Query: 2 DSFPNFL 8
+ FPNFL
Sbjct: 228 EEFPNFL 234


>sp|DTDA_THEVO|D-AMINOACYL-TRNA deacylase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 FPNFLA 9
FPNF+A
Sbjct: 171 FPNFVA 176


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 3 SFPNFL 8
SFPNF+
Sbjct: 411 SFPNFV 416


>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 3 SFPNFL 8
SFPNF+
Sbjct: 415 SFPNFV 420


>sp|ACDG2_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 1 RDSFPNFL 8
+D+F NFL
Sbjct: 250 KDTFTNFL 257


>sp|ACDG1_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 RDSFPNFL 8
+D+F NFL
Sbjct: 249 KDTFTNFL 256


>sp|ACDG1_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 1 RDSFPNFL 8
+D+F NFL
Sbjct: 250 KDTFTNFL 257


>sp|ACDG_METAC|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 RDSFPNFL 8
+D+F NFL
Sbjct: 249 KDTFTNFL 256


>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DSFPNFL 8
DS+P FL
Sbjct: 403 DSYPGFL 409


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 DSFPNFLA 9
D FP F+A
Sbjct: 288 DHFPGFIA 295


>sp|PRIS_NITMS|DNA primase small subunit PriS|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RDSFPNF 7
R+SFP+F
Sbjct: 224 RNSFPDF 230




16|Sequence|76|85|NFLACKQERH

***** No hits found ******


17|Sequence|81|90|KQERHDWDYC

>sp|TRPF_METKA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanopyrus kandleri (strain AV19 /

Query: 3 ERHDWD 8
ERHDWD
Sbjct: 147 ERHDWD 152


>sp|TRPF_HALVD|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Haloferax volcanii (strain ATCC 29605

Query: 3 ERHDWD 8
E HDWD
Sbjct: 140 ETHDWD 145


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 4 RHDWD 8
+HDWD
Sbjct: 377 KHDWD 381


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 1 KQERHDWDYC 10
KQ DWD C
Sbjct: 239 KQTWVDWDLC 248


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 QERHDWD 8
+E HDWD
Sbjct: 220 EELHDWD 226


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 QERHDWD 8
+E HDWD
Sbjct: 220 EELHDWD 226


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 QERHDWD 8
+E HDWD
Sbjct: 221 RELHDWD 227


>sp|AMZA_METJA|ARCHAEMETZINCIN jannaschii (strain ATCC 43067

Query: 6 DWDYC 10
DW YC
Sbjct: 159 DWRYC 163


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QERHDWD 8
+E HDWD
Sbjct: 220 KELHDWD 226


>sp|TRPF_NATPD|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 HDWD 8
HDWD
Sbjct: 140 HDWD 143


>sp|TRPF_METAC|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 HDWD 8
HDWD
Sbjct: 168 HDWD 171


>sp|TRPF1_METMA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 HDWD 8
HDWD
Sbjct: 164 HDWD 167


>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 5 HDWD 8
HDWD
Sbjct: 323 HDWD 326


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 HDWD 8
HDWD
Sbjct: 323 HDWD 326


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 5 HDWD 8
HDWD
Sbjct: 323 HDWD 326


>sp|Y1110_METJA|UNCHARACTERIZED protein MJ1110|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HDWD 8
HDWD
Sbjct: 423 HDWD 426


>sp|DHYS_PYRAB|PROBABLE deoxyhypusine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 KQERHD 6
K+ERHD
Sbjct: 225 KEERHD 230


>sp|THIC_THEGJ|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 RHDW 7
RHDW
Sbjct: 46 RHDW 49


>sp|TRPF_HALMA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Haloarcula marismortui (strain ATCC 43049

Query: 3 ERHDWD 8
E HDW+
Sbjct: 140 ETHDWE 145


>sp|TRPF_HALLT|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 ERHDWD 8
E HDW+
Sbjct: 141 ETHDWE 146


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 QERHDWD 8
+E HDWD
Sbjct: 220 EELHDWD 226


>sp|SURE_HALWD|5'-NUCLEOTIDASE SurE|Haloquadratum walsbyi (strain DSM 16790

Query: 5 HDWDY 9
HDW Y
Sbjct: 58 HDWGY 62


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 QERHDWD 8
+E HDWD
Sbjct: 220 EELHDWD 226


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 6 DWDYC 10
DWD+C
Sbjct: 395 DWDWC 399


>sp|THIC_THEKO|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 RHDW 7
RHDW
Sbjct: 46 RHDW 49


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 1 KQERHDWDY 9
+++ ++WDY
Sbjct: 97 EEKSYEWDY 105


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 RHDWDYC 10
RHD YC
Sbjct: 28 RHDQVYC 34


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 ERHDWDYC 10
E DWD+C
Sbjct: 415 ESMDWDWC 422


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 2 QERHDWDY 9
++ ++WDY
Sbjct: 102 EKSYEWDY 109


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 2 QERHDWDY 9
++ ++WDY
Sbjct: 101 EKSYEWDY 108


>sp|RL32_SULTO|LARGE ribosomal subunit protein eL32|Sulfurisphaera tokodaii (strain

Query: 4 RHDWD 8
R+DWD
Sbjct: 26 RYDWD 30


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 6 DWDY 9
DWDY
Sbjct: 65 DWDY 68


>sp|Y1353_ARCFU|UNCHARACTERIZED protein AF_1353|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QERHDW 7
+ERH W
Sbjct: 125 EERHGW 130


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 2 QERHDWDY 9
++ ++WDY
Sbjct: 98 EKTYEWDY 105


>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KQERHDWDYC 10
K++RH +D+
Sbjct: 168 KEKRHPYDFA 177


>sp|UVRC_HALWD|UVRABC system protein C|Haloquadratum walsbyi (strain DSM 16790

Query: 5 HDWD 8
HDWD
Sbjct: 497 HDWD 500


>sp|DEOC_THEAC|DEOXYRIBOSE-PHOSPHATE aldolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 HDWDY 9
H WDY
Sbjct: 105 HRWDY 109




18|Sequence|86|95|DWDYCEHRDY

>sp|KPRS2_ARCFU|RIBOSE-PHOSPHATE pyrophosphokinase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DWDYCEHR 8
+WDY E R
Sbjct: 167 EWDYMEKR 174


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 1 DWDYCE 6
DWDY E
Sbjct: 65 DWDYIE 70


>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 DYCEHRDY 10
DYC +DY
Sbjct: 168 DYCGSQDY 175


>sp|GLYA_METJA|SERINE hydroxymethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 CEHRDY 10
CEH+D+
Sbjct: 304 CEHKDF 309


>sp|AMZA_METJA|ARCHAEMETZINCIN jannaschii (strain ATCC 43067

Query: 1 DWDYCE 6
DW YC+
Sbjct: 159 DWRYCK 164


>sp|Y416_METJA|DOUBLE zinc ribbon protein MJ0416|Methanocaldococcus jannaschii (strain

Query: 2 WDYCEH 7
W YC H
Sbjct: 145 WKYCAH 150


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 3 DYCEHRDY 10
DY RDY
Sbjct: 1015 DYAPQRDY 1022


>sp|HMGCS_METTL|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermococcus thermolithotrophicus

Query: 1 DWDYC 5
D+DYC
Sbjct: 231 DYDYC 235


>sp|Y773_METJA|UNCHARACTERIZED protein MJ0773|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DYCEHRDY 10
D C+H DY
Sbjct: 156 DTCKHIDY 163


>sp|HMGCS_METVS|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DWDYC 5
D+DYC
Sbjct: 231 DYDYC 235


>sp|OTC_SULTO|ORNITHINE carbamoyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WDYCEHRDY 10
WD E+R Y
Sbjct: 288 WDQAENRLY 296


>sp|OTC_SULAC|ORNITHINE carbamoyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WDYCEHRDY 10
WD E+R Y
Sbjct: 288 WDQAENRLY 296


>sp|OTC_SACS2|ORNITHINE carbamoyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WDYCEHRDY 10
WD E+R Y
Sbjct: 289 WDQAENRLY 297


>sp|HMGCS_METJA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DWDYC 5
D+DYC
Sbjct: 227 DYDYC 231


>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WDYCEHR 8
WD EH+
Sbjct: 174 WDILEHK 180


>sp|HMGCS_METM6|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C6 /

Query: 1 DWDYC 5
D+DYC
Sbjct: 231 DYDYC 235


>sp|HMGCS_METMP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DWDYC 5
D+DYC
Sbjct: 231 DYDYC 235


>sp|HMGCS_METM7|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C7 /

Query: 1 DWDYC 5
D+DYC
Sbjct: 231 DYDYC 235


>sp|HMGCS_METM5|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C5 /

Query: 1 DWDYC 5
D+DYC
Sbjct: 231 DYDYC 235


>sp|Y674_METJA|UNCHARACTERIZED protein MJ0674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YCEHRDY 10
+CEHR Y
Sbjct: 82 FCEHRCY 88




19|Sequence|91|100|EHRDYVMRMK

>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 2 HRDYVMRMK 10
HR YV+ MK
Sbjct: 53 HRSYVIDMK 61


>sp|PURT_HALWD|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Haloquadratum walsbyi

Query: 2 HRDYVMRM 9
HRDY++ M
Sbjct: 59 HRDYIIDM 66


>sp|AROC_KORCO|CHORISMATE synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 HRDYVMRMK 10
H DYV R+K
Sbjct: 106 HADYVARLK 114


>sp|PURT_METAR|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocella

Query: 2 HRDYVMRMK 10
HR YV MK
Sbjct: 58 HRSYVTNMK 66


>sp|PYRC_SULAC|DIHYDROOROTASE acidocaldarius (strain ATCC 33909

Query: 3 RDYVMRMK 10
RDYV R+K
Sbjct: 234 RDYVTRLK 241


>sp|SAHH_SULAC|ADENOSYLHOMOCYSTEINASE acidocaldarius (strain ATCC 33909

Query: 3 RDYVMRMK 10
RD+++RMK
Sbjct: 275 RDHILRMK 282


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 EHRDYVMRM 9
+HRDY+ R+
Sbjct: 381 QHRDYLKRL 389


>sp|HIS8_METVS|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus vannielii (strain ATCC 35089

Query: 4 DYVMRMK 10
DY+MR+K
Sbjct: 248 DYMMRIK 254


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 105 HRDFVKNM 112


>sp|EF1A_PYRAE|ELONGATION factor 1-alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 105 HRDFVKNM 112


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|EF1A_METS3|ELONGATION factor 1-alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 85 HRDFVKNM 92


>sp|EF1A_METLZ|ELONGATION factor 1-alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|EF1A_HALWD|ELONGATION factor 1-alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 94 HRDFVKNM 101


>sp|EF1A_HALSA|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 700922

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 94 HRDFVKNM 101


>sp|EF1A_HALS3|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 29341

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 94 HRDFVKNM 101


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 94 HRDFVKNM 101


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 105 HRDFVKNM 112


>sp|EF1A_METST|ELONGATION factor 1-alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 85 HRDFVKNM 92


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 94 HRDFVKNM 101


>sp|EF1A_METAR|ELONGATION factor 1-alpha|Methanocella arvoryzae (strain DSM 22066

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|HIS8_METM5|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C5 /

Query: 4 DYVMRMK 10
DY+MR+K
Sbjct: 248 DYMMRIK 254


>sp|EF1A_METB6|ELONGATION factor 1-alpha|Methanoregula boonei (strain DSM 21154

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|EF1A_PICTO|ELONGATION factor 1-alpha|Picrophilus torridus (strain ATCC 700027

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|EF1A_METAC|ELONGATION factor 1-alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|HIS8_METMP|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 4 DYVMRMK 10
DY+MR+K
Sbjct: 248 DYMMRIK 254


>sp|EF1A_METTH|ELONGATION factor 1-alpha|Methanothermobacter thermautotrophicus (strain

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 85 HRDFVKNM 92


>sp|EF1A_METMA|ELONGATION factor 1-alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|HIS8_METM7|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C7 /

Query: 4 DYVMRMK 10
DY+MR+K
Sbjct: 248 DYMMRIK 254


>sp|EF1A_THESM|ELONGATION factor 1-alpha|Thermococcus sibiricus (strain DSM 12597

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 93 HRDFVKNM 100


>sp|EF1A_METKA|ELONGATION factor 1-alpha|Methanopyrus kandleri (strain AV19 /

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 85 HRDFVKNM 92


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|HIS8_METM6|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C6 /

Query: 4 DYVMRMK 10
DY+MR+K
Sbjct: 248 DYMMRIK 254


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 1 EHRDYVMRM 9
EH D+V+R+
Sbjct: 562 EHSDHVIRV 570


>sp|EF1A_METBF|ELONGATION factor 1-alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|EF1A_CALMQ|ELONGATION factor 1-alpha|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 104 HRDFVKNM 111


>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|EF1A_DESMO|ELONGATION factor 1-alpha|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 96 HRDFVKNM 103


>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|EF1A_HYPBU|ELONGATION factor 1-alpha|Hyperthermus butylicus (strain DSM 5456

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 94 HRDFVKNM 101


>sp|EF1A_THECE|ELONGATION factor 1-alpha|Thermococcus celer

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 93 HRDFVKNM 100


>sp|EF1A_THEKO|ELONGATION factor 1-alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 93 HRDFVKNM 100


>sp|EF1A_PYRHO|ELONGATION factor 1-alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 93 HRDFVKNM 100


>sp|EF1A_PYRAB|ELONGATION factor 1-alpha|Pyrococcus abyssi (strain GE5 /

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 93 HRDFVKNM 100


>sp|EF1A_THEGJ|ELONGATION factor 1-alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 93 HRDFVKNM 100


>sp|EF1A_SULAC|ELONGATION factor 1-alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 94 HRDFVKNM 101


>sp|EF1A_THEON|ELONGATION factor 1-alpha|Thermococcus onnurineus (strain NA1)

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 93 HRDFVKNM 100


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 94 HRDFVKNM 101


>sp|EF1A_PYRFU|ELONGATION factor 1-alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 93 HRDFVKNM 100


>sp|SYT_PYRFU|THREONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EHRDYVMRM 9
EH+D+++ +
Sbjct: 397 EHKDFIIEL 405


>sp|EF1A_METS5|ELONGATION factor 1-alpha|Metallosphaera sedula (strain ATCC 51363

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 94 HRDFVKNM 101


>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 94 HRDFVKNM 101


>sp|EF1A_PYRWO|ELONGATION factor 1-alpha|Pyrococcus woesei

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 HRDYVMRM 9
HRD+V M
Sbjct: 95 HRDFVKNM 102


>sp|HIS8_META3|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 DYVMRMK 10
DY+MR+K
Sbjct: 248 DYMMRVK 254




20|Sequence|96|105|VMRMKEFERE

>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 MRMKEFER 9
+R+KEF+R
Sbjct: 516 IRLKEFDR 523


>sp|PYRB_METAC|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina acetivorans

Query: 1 VMRMKEFERE 10
V+ MK+F RE
Sbjct: 8 VISMKDFSRE 17


>sp|PYRB_METMA|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina mazei

Query: 1 VMRMKEFERE 10
V+ MK+F RE
Sbjct: 9 VISMKDFSRE 18


>sp|AATD_METS3|A-TYPE ATP synthase subunit D|Methanobrevibacter smithii (strain ATCC

Query: 2 MRMKEFERE 10
MR++E ERE
Sbjct: 190 MRLQEMERE 198


>sp|Y2362_ARCFU|UNCHARACTERIZED protein AF_2362|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MRMKEFERE 10
M + EFERE
Sbjct: 1 MNLSEFERE 9


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 MKEFER 9
MKEFER
Sbjct: 193 MKEFER 198


>sp|AATD_METM5|A-TYPE ATP synthase subunit D|Methanococcus maripaludis (strain C5 /

Query: 1 VMRMKEFERE 10
MR++E ERE
Sbjct: 185 AMRLEEMERE 194


>sp|AATD_METM7|A-TYPE ATP synthase subunit D|Methanococcus maripaludis (strain C7 /

Query: 1 VMRMKEFERE 10
MR++E ERE
Sbjct: 185 AMRLEEMERE 194


>sp|AATD_METM6|A-TYPE ATP synthase subunit D|Methanococcus maripaludis (strain C6 /

Query: 1 VMRMKEFERE 10
MR++E ERE
Sbjct: 185 AMRLEEMERE 194


>sp|AATD_METMP|A-TYPE ATP synthase subunit D|Methanococcus maripaludis (strain DSM 14266

Query: 1 VMRMKEFERE 10
MR++E ERE
Sbjct: 185 AMRLEEMERE 194


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 1 VMRMKEFERE 10
V+ MK+F RE
Sbjct: 7 VLSMKDFSRE 16


>sp|AATD_META3|A-TYPE ATP synthase subunit D|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 MRMKEFERE 10
MR+ E ERE
Sbjct: 186 MRLDEMERE 194




21|Sequence|101|110|EFERERRLLQ

>sp|MFNC_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate transaminase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EFERERRLL 9
EF+R RRL+
Sbjct: 281 EFDRRRRLV 289


>sp|SUDHB_PYRFU|SULFIDE dehydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EFERERRLL 9
++ERERR++
Sbjct: 270 KWERERRMV 278




22|Sequence|106|115|RRLLQRKKRR

>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 1 RRLLQRKKR 9
R+L+QR KR
Sbjct: 482 RKLVQRLKR 490


>sp|Y1266_ARCFU|UNCHARACTERIZED protein AF_1266|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RLLQRKKRR 10
R+LQRK+R+
Sbjct: 159 RMLQRKERQ 167




23|Sequence|111|120|RKKRREKKAA

***** No hits found ******


24|Sequence|116|125|EKKAAELAKG

>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KKAAELAKG 10
KKAAEL KG
Sbjct: 296 KKAAELLKG 304


>sp|ADPRH_METOA|PROTEIN-ADP-RIBOSE hydrolase|Methanobrevibacter oralis

Query: 1 EKKAAELA 8
+KKAAE+A
Sbjct: 215 QKKAAEIA 222


>sp|HAF1_ARCFU|PROBABLE archaeal histone A1-1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KKAAELAK 9
KKAAELAK
Sbjct: 46 KKAAELAK 53


>sp|PFDA_PYRFU|PREFOLDIN subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EKKAAELAK 9
+K+AAELAK
Sbjct: 121 QKRAAELAK 129


>sp|GLYA_PYRCJ|SERINE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KKAAELAKG 10
K+ AE+AKG
Sbjct: 180 KEVAEIAKG 188


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KKAAELAKG 10
K+AAE+ KG
Sbjct: 271 KRAAEILKG 279




25|Sequence|121|130|ELAKGQGPGE

>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 5 GQGPGE 10
G GPGE
Sbjct: 93 GDGPGE 98




26|Sequence|126|137|QGPGEVDPKVAL

>sp|CAS6_HALVD|CRISPR-ASSOCIATED endoribonuclease Cas6|Haloferax volcanii (strain ATCC 29605

Query: 2 GPGEVD 7
GPGEVD
Sbjct: 186 GPGEVD 191


>sp|Y939_METJA|UNCHARACTERIZED protein MJ0939|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QGPGEVDPKVAL 12
+G GEVD K+ L
Sbjct: 262 KGEGEVDKKLFL 273


>sp|CSA1_THETK|CRISPR-ASSOCIATED exonuclease Csa1|Thermoproteus tenax (strain ATCC 35583

Query: 1 QGPGEVDPKV 10
QGP EV P++
Sbjct: 18 QGPAEVSPEL 27


>sp|RS15_CENSY|SMALL ribosomal subunit protein uS15|Cenarchaeum symbiosum (strain A)

Query: 1 QGPGEVD 7
QGPGEV+
Sbjct: 27 QGPGEVE 33


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 4 GEVDPKVAL 12
GE+DP+V L
Sbjct: 524 GEIDPEVLL 532


>sp|PROA_HALWD|GAMMA-GLUTAMYL phosphate reductase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 GEVDPKVA 11
GE+DP+ A
Sbjct: 5 GEIDPQTA 12


>sp|Y1253_SACS2|PUTATIVE esterase SSO1253|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QGPGEVDPKV 10
+GP V+P+V
Sbjct: 98 EGPFTVEPRV 107


>sp|TMG10_METTH|TRNA (guanine(10)-N2)-dimethyltransferase|Methanothermobacter

Query: 3 PGEVDPKVA 11
PG + PK+A
Sbjct: 168 PGSMSPKLA 176


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 4 GEVDPKV 10
GEV PKV
Sbjct: 1040 GEVKPKV 1046


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 2 GPGEVDPKVA 11
GP +DP+
Sbjct: 105 GPSSIDPETG 114


>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PGEVDPKVAL 12
PG +DP+ A+
Sbjct: 95 PGHLDPRKAM 104


>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PGEVDPKV 10
PGE+ P+V
Sbjct: 79 PGEIHPRV 86


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 3 PGEVDPKV 10
PGE+ PK+
Sbjct: 707 PGELQPKI 714


>sp|ARSA_METTH|PUTATIVE arsenical pump-driving ATPase|Methanothermobacter

Query: 5 EVDPKVAL 12
E+DP+VA+
Sbjct: 79 EIDPEVAM 86


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GPGEVDPKVA 11
GP +DP+
Sbjct: 124 GPSSIDPETG 133


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GPGEVDPK 9
GP +DPK
Sbjct: 40 GPDFIDPK 47


>sp|TBP_META3|TATA-BOX-BINDING protein|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QGPGEV----DPKVAL 12
Q PG V DPKVAL
Sbjct: 38 QFPGLVCRLSDPKVAL 53


>sp|TBP_METVS|TATA-BOX-BINDING protein|Methanococcus vannielii (strain ATCC 35089

Query: 1 QGPGEV----DPKVAL 12
Q PG V DPKVAL
Sbjct: 38 QFPGLVCRLSDPKVAL 53


>sp|TBP_METM7|TATA-BOX-BINDING protein|Methanococcus maripaludis (strain C7 /

Query: 1 QGPGEV----DPKVAL 12
Q PG V DPKVAL
Sbjct: 38 QFPGLVCRLSDPKVAL 53


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PGEVDPKV 10
PG+VD K+
Sbjct: 383 PGKVDKKI 390


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 4 GEVDPKVAL 12
GE+DPK L
Sbjct: 200 GEIDPKKCL 208


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GEVDPKV 10
GE+ PKV
Sbjct: 1040 GEIQPKV 1046


>sp|Y932_METKA|UNCHARACTERIZED protein MK0932|Methanopyrus kandleri (strain AV19 /

Query: 2 GPGEVDPKVAL 12
GPG DP L
Sbjct: 93 GPGAADPNALL 103


>sp|LYSK_SACI1|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 PGEVDPKV 10
PG ++PK+
Sbjct: 73 PGYIEPKI 80


>sp|TBP_METTL|TATA-BOX-BINDING protein|Methanothermococcus thermolithotrophicus

Query: 1 QGPGEV----DPKVAL 12
Q PG V DPKVAL
Sbjct: 38 QFPGLVCRLSDPKVAL 53


>sp|LYSK_SACI6|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 PGEVDPKV 10
PG ++PK+
Sbjct: 73 PGYIEPKI 80


>sp|LYSK_SACI3|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 PGEVDPKV 10
PG ++PK+
Sbjct: 73 PGYIEPKI 80


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 QGPGEVDPKV 10
+GPG+V P V
Sbjct: 616 RGPGQVIPAV 625


>sp|LYSK_SACI7|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 PGEVDPKV 10
PG ++PK+
Sbjct: 73 PGYIEPKI 80


>sp|LYSK_SACI4|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 PGEVDPKV 10
PG ++PK+
Sbjct: 73 PGYIEPKI 80


>sp|LYSK_SACI2|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 PGEVDPKV 10
PG ++PK+
Sbjct: 73 PGYIEPKI 80


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 3 PGEVDPKVA 11
P E+ PK+A
Sbjct: 707 PAELQPKIA 715


>sp|Y1542_METKA|UPF0173 metal-dependent hydrolase MK1542|Methanopyrus kandleri (strain

Query: 1 QGPGEVDPKVAL 12
+ P EVDP + L
Sbjct: 34 KSPDEVDPDLVL 45


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 3 PGEVDPKVA 11
P E+ PK+A
Sbjct: 707 PAELQPKIA 715


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 QGPGEVDPKV 10
+GPG++ P V
Sbjct: 603 RGPGQIYPAV 612


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 3 PGEVDPKVA 11
P E+ PK+A
Sbjct: 707 PNELQPKIA 715


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 GEVDPKV 10
GE+DP+V
Sbjct: 408 GELDPEV 414


>sp|PYRB_METMJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanoculleus marisnigri

Query: 4 GEVDPKV 10
GE+DP V
Sbjct: 264 GEIDPAV 270


>sp|RS4E_SULTO|SMALL ribosomal subunit protein eS4|Sulfurisphaera tokodaii (strain DSM

Query: 2 GPGEVDPKVAL 12
G E+DP V +
Sbjct: 232 GDSEIDPNVGV 242






THE END