NDUAD_HUMAN Blast OutputR
HumanVirus
1|SequenceR|10|1|MDQKVKSAAM

>sp|PG112_VACCC|LATE protein OPG112|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 MDQKVKSAAM 10
MD+++KS AM
Sbjct: 3 MDKRIKSLAM 12




2|SequenceR|15|6|GGPPPMDQKV

>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 2 GPPPMDQ 8
GPPPM
Sbjct: 26 GPPPMSH 32


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 2 GPPPMDQ 8
GPPPM
Sbjct: 26 GPPPMSH 32


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 2 GPPPMDQ 8
GPPPM
Sbjct: 26 GPPPMSH 32


>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)

Query: 3 PPPMDQKV 10
PPP+D K+
Sbjct: 435 PPPVDNKI 442


>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 GGPPPMD 7
G PPP D
Sbjct: 266 GTPPPKD 272


>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 GGPPPMD 7
G PPP D
Sbjct: 266 GTPPPKD 272


>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 GGPPPMD 7
G PPP D
Sbjct: 266 GTPPPKD 272


>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)

Query: 3 PPPMDQKV 10
PPP+D K+
Sbjct: 435 PPPVDNKI 442


>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)

Query: 3 PPPMDQKV 10
PPP+D K+
Sbjct: 435 PPPVDSKI 442


>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)

Query: 3 PPPMDQKV 10
PPP+D K+
Sbjct: 435 PPPVDDKI 442


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1 GGPPPMDQK 9
GGP +DQK
Sbjct: 1583 GGPWKLDQK 1591


>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)

Query: 3 PPPMDQKV 10
PPP+D K+
Sbjct: 435 PPPVDDKI 442


>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)

Query: 4 PPMDQK 9
PP DQK
Sbjct: 534 PPQDQK 539


>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)

Query: 3 PPPMDQKV 10
PPP+D ++
Sbjct: 631 PPPVDSQI 638


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 GPPPMDQKV 10
GP P+DQ V
Sbjct: 120 GPHPVDQPV 128


>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3 PPPMDQKV 10
PPP+D +
Sbjct: 156 PPPIDLSI 163


>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 PPPMDQKV 10
PPP+D +
Sbjct: 156 PPPIDLSI 163


>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 PPPMDQKV 10
PPP+D +
Sbjct: 157 PPPIDLSI 164


>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57

Query: 3 PPPMDQKV 10
PPP Q+V
Sbjct: 249 PPPKRQRV 256


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 1 GGPPP 5
GGPPP
Sbjct: 148 GGPPP 152


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 2 GPPPM 6
GPPP+
Sbjct: 32 GPPPI 36


>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 GGPPPMD 7
GGP P D
Sbjct: 330 GGPLPTD 336


>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)

Query: 3 PPPMD 7
PPP+D
Sbjct: 220 PPPLD 224


>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 2 GPPPMDQK 9
GPPP +++
Sbjct: 271 GPPPKNEE 278


>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain

Query: 1 GGPPPMDQK 9
GGP P D K
Sbjct: 191 GGPKPTDVK 199


>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2

Query: 1 GGPPPMDQK 9
G PPP +
Sbjct: 336 GSPPPTHNR 344


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 2 GPPPMDQKV 10
G PP+D ++
Sbjct: 1671 GVPPIDPEI 1679


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 2 GPPPMDQKV 10
G PP+D ++
Sbjct: 1671 GVPPIDPEI 1679


>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5

Query: 1 GGPPPMDQK 9
G PPP +
Sbjct: 336 GSPPPTHNR 344


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 2 GPPPMDQKV 10
G PP+D ++
Sbjct: 1671 GVPPVDPEI 1679


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1 GGPPPMDQK 9
GPPP Q+
Sbjct: 68 AGPPPKQQR 76


>sp|UL38_HCMVA|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 PPMDQKV 10
PP+DQ++
Sbjct: 88 PPLDQEL 94


>sp|UL38_HCMVM|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 PPMDQKV 10
PP+DQ++
Sbjct: 88 PPLDQEL 94


>sp|Y168_ADE02|UNCHARACTERIZED protein C-168|Human adenovirus C serotype 2

Query: 1 GGPPPMD 7
G PPP D
Sbjct: 114 GTPPPRD 120


>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57

Query: 3 PPPMDQKV 10
PPP Q+V
Sbjct: 58 PPPKRQRV 65


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 1 GGPPPMDQ 8
GGP P D+
Sbjct: 462 GGPLPKDR 469


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 3 PPPMD 7
PPP+D
Sbjct: 1227 PPPVD 1231


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 1 GGPPPMDQ 8
GGP P D+
Sbjct: 462 GGPLPKDR 469


>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 1 GGPPPMDQ 8
G PPP Q
Sbjct: 275 GAPPPSQQ 282


>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 1 GGPPPMDQ 8
G PPP Q
Sbjct: 275 GAPPPSQQ 282


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 1 GGPPPMDQ 8
GGP P D+
Sbjct: 462 GGPLPKDR 469


>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)

Query: 2 GPPP 5
GPPP
Sbjct: 246 GPPP 249


>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P

Query: 2 GPPPMDQK 9
GPPP +K
Sbjct: 108 GPPPQTRK 115


>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)

Query: 1 GGPPPMD 7
GPPP D
Sbjct: 434 AGPPPDD 440


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 2 GPPP 5
GPPP
Sbjct: 35 GPPP 38


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain

Query: 2 GPPP 5
GPPP
Sbjct: 35 GPPP 38


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 2 GPPP 5
GPPP
Sbjct: 35 GPPP 38


>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P

Query: 3 PPPMDQ 8
PPP D+
Sbjct: 225 PPPADE 230


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 2 GPPP 5
GPPP
Sbjct: 35 GPPP 38


>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 1 GGPPPMDQ 8
G PPP Q
Sbjct: 275 GAPPPSQQ 282


>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)

Query: 2 GPPP 5
GPPP
Sbjct: 598 GPPP 601




3|SequenceR|20|11|DIPGYGGPPP

>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 PGYGGPPP 10
P YG PPP
Sbjct: 263 PLYGTPPP 270


>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 PGYGGPPP 10
P YG PPP
Sbjct: 263 PLYGTPPP 270


>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 PGYGGPPP 10
P YG PPP
Sbjct: 263 PLYGTPPP 270


>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)

Query: 2 IPGYGGPP 9
+PG GPP
Sbjct: 347 VPGAAGPP 354


>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 5 YGGPPP 10
Y GPPP
Sbjct: 24 YTGPPP 29


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 5 YGGPPP 10
Y GPPP
Sbjct: 24 YTGPPP 29


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 5 YGGPPP 10
Y GPPP
Sbjct: 24 YTGPPP 29


>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)

Query: 3 PGYGGPP 9
PG GPP
Sbjct: 348 PGAAGPP 354


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 PGYGGPPP 10
P YG P P
Sbjct: 701 PSYGFPTP 708


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 2 IPGYGG 7
IPG+GG
Sbjct: 862 IPGFGG 867


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 1 DIP--GYGGPPP 10
D+P GGPPP
Sbjct: 141 DVPTEALGGPPP 152


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 3 PGYGG 7
PGYGG
Sbjct: 869 PGYGG 873


>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)

Query: 2 IPGYGGP 8
IP YG P
Sbjct: 85 IPTYGTP 91


>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)

Query: 2 IPGYGGP 8
IP YG P
Sbjct: 85 IPTYGTP 91


>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)

Query: 2 IPGYGGP 8
IP YG P
Sbjct: 85 IPTYGTP 91


>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)

Query: 2 IPGYGGP 8
IP YG P
Sbjct: 85 IPTYGTP 91


>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)

Query: 3 PGYGGPPP 10
P +GG PP
Sbjct: 672 PSHGGSPP 679


>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 DIPGYGGPPP 10
D PG G PP
Sbjct: 640 DNPGLGQSPP 649


>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 DIPGYGGPPP 10
D PG G PP
Sbjct: 640 DNPGLGQSPP 649


>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 DIPGYGGPPP 10
D PG G PP
Sbjct: 640 DNPGLGQSPP 649


>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)

Query: 3 PGYGGPPP 10
P +GG PP
Sbjct: 673 PSHGGSPP 680


>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69

Query: 1 DIPGYGGP 8
DIP Y GP
Sbjct: 400 DIPIYNGP 407


>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40

Query: 3 PGYGGPP 9
PGY PP
Sbjct: 40 PGYVTPP 46


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 2 IPGYGGPP 9
+PGY G P
Sbjct: 428 VPGYEGRP 435


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 2 IPGYGGPP 9
+PGY G P
Sbjct: 428 VPGYEGRP 435


>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 1 DIPGYGGP 8
D G+GGP
Sbjct: 1180 DSCGFGGP 1187


>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53

Query: 1 DIPGYGGP 8
D+P Y GP
Sbjct: 397 DVPIYSGP 404


>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41

Query: 3 PGYGGPP 9
PGY PP
Sbjct: 40 PGYVTPP 46


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 5 YGGPPP 10
YG PPP
Sbjct: 1597 YGAPPP 1602


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 5 YGGPPP 10
YG PPP
Sbjct: 1597 YGAPPP 1602


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 3 PGYGGPP 9
PG G PP
Sbjct: 470 PGAGVPP 476


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 5 YGGPPP 10
YG PPP
Sbjct: 1597 YGAPPP 1602


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 4 GYGGP 8
G+GGP
Sbjct: 1183 GFGGP 1187


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 4 GYGGP 8
G+GGP
Sbjct: 1183 GFGGP 1187


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 4 GYGGP 8
G+GGP
Sbjct: 1183 GFGGP 1187


>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 PGYGGPPP 10
PGY GP P
Sbjct: 860 PGYAGPWP 867


>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18

Query: 1 DIPGYGGP 8
D+P Y GP
Sbjct: 396 DVPVYTGP 403


>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20

Query: 1 DIPGYGGPPP 10
D+P G PP
Sbjct: 178 DVPNPGSCPP 187


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 DIPGYGG 7
D PG GG
Sbjct: 174 DCPGGGG 180


>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 DIPGYGG 7
D PG GG
Sbjct: 174 DCPGGGG 180


>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 PGYGGPP 9
PG GG P
Sbjct: 294 PGCGGAP 300


>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5 YGGPPP 10
Y GPPP
Sbjct: 171 YAGPPP 176


>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5 YGGPPP 10
Y GPPP
Sbjct: 171 YAGPPP 176


>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5 YGGPPP 10
Y GPPP
Sbjct: 171 YAGPPP 176


>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a

Query: 1 DIPGYGGP 8
D+P Y GP
Sbjct: 403 DVPVYTGP 410


>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 PGYGGPP 9
PG GG P
Sbjct: 294 PGCGGAP 300


>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45

Query: 1 DIPGYGGP 8
D+P Y GP
Sbjct: 397 DVPIYTGP 404


>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27

Query: 1 DIPGYGGP 8
D+P Y GP
Sbjct: 399 DVPVYTGP 406


>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31

Query: 1 DIPGYGGP 8
DIP + GP
Sbjct: 400 DIPIFSGP 407


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 1 DIPGYG 6
+IPG+G
Sbjct: 951 EIPGFG 956


>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57

Query: 1 DIPGYGGP 8
D+P Y GP
Sbjct: 400 DVPVYTGP 407


>sp|UL12_HCMVA|UNCHARACTERIZED protein UL12|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 GYGGPP 9
G+G PP
Sbjct: 20 GFGKPP 25




4|SequenceR|25|16|LNRKYDIPGY

>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 3 RKYDIPGY 10
R +DIP Y
Sbjct: 223 RTFDIPNY 230


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank

Query: 3 RKYDIPGY 10
R +DIP Y
Sbjct: 223 RTFDIPNY 230


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 3 RKYDIPGY 10
R +DIP Y
Sbjct: 223 RTFDIPDY 230


>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 NRKYDIPGY 10
NR+Y P Y
Sbjct: 236 NRRYQTPTY 244


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 LNRKYDIPGY 10
LNR Y GY
Sbjct: 5477 LNRNYVFTGY 5486


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 LNRKYDIPGY 10
LNR Y GY
Sbjct: 5486 LNRNYVFTGY 5495


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 LNRKYDIPGY 10
LNR Y GY
Sbjct: 5500 LNRNYVFTGY 5509


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 4 KYDIPGY 10
+Y+IPG+
Sbjct: 949 QYEIPGF 955


>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 115 YDVPNY 120


>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 100 YDVPDY 105


>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 100 YDVPDY 105


>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 100 YDVPDY 105


>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 117 YDVPDY 122


>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 YDIPG 9
YD+PG
Sbjct: 141 YDVPG 145


>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 YDIPG 9
YD+PG
Sbjct: 141 YDVPG 145


>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 100 YDVPDY 105


>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 100 YDVPDY 105


>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 116 YDVPDY 121


>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 100 YDVPDY 105


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1 LNRKYDIP 8
L RK+D+P
Sbjct: 2006 LIRKHDMP 2013


>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 2 NRKYDIP 8
+ KYD+P
Sbjct: 885 SNKYDVP 891


>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969

Query: 5 YDIPGY 10
YD+P Y
Sbjct: 100 YDVPDY 105


>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPNY 506


>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LNRKYDIPGY 10
LNR+ + GY
Sbjct: 49 LNRRQHVTGY 58


>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5 YDIPGY 10
YD PG+
Sbjct: 188 YDAPGW 193


>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5 YDIPGY 10
YD PG+
Sbjct: 188 YDAPGW 193


>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5 YDIPGY 10
YD PG+
Sbjct: 188 YDAPGW 193


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 2 NRKYDIPGY 10
N KY + GY
Sbjct: 512 NDKYSMAGY 520


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 3 RKYDIPGY 10
R+Y +PG+
Sbjct: 1056 RQYVLPGF 1063


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Dumas)

Query: 3 RKYDIPGY 10
R+Y +PG+
Sbjct: 1056 RQYVLPGF 1063


>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 4 KYDIP 8
KYD+P
Sbjct: 467 KYDLP 471


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 4 KYDIP 8
KYD+P
Sbjct: 467 KYDLP 471


>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain

Query: 4 KYDIP 8
KYD+P
Sbjct: 1152 KYDLP 1156


>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 494 NGTYDYPKY 502


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 4 KYDIP 8
KYD+P
Sbjct: 467 KYDLP 471


>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 494 NGTYDYPKY 502


>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 497 NGTYDYPKY 505


>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 494 NGTYDYPKY 502


>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 494 NGTYDYPKY 502


>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 497 NGTYDYPKY 505


>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 497 NGTYDYPKY 505


>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 497 NGTYDYPKY 505


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 LNRKYDIPGY 10
LN+ Y GY
Sbjct: 5473 LNKNYVFTGY 5482


>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 497 NGTYDYPKY 505


>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPKY 506


>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 497 NGTYDYPKY 505


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 LNRKYDIPGY 10
LN+ Y GY
Sbjct: 5511 LNKNYVFTGY 5520


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 LNRKYDIPGY 10
LN+ Y GY
Sbjct: 5561 LNKNYVFTGY 5570


>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 500 NGTYDYPQY 508


>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 500 NGTYDYPQY 508


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 LNRKYDIPGY 10
LN+ Y GY
Sbjct: 5531 LNKNYVFTGY 5540


>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 500 NGTYDYPQY 508


>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 500 NGTYDYPQY 508


>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 492 NGTYDYPQY 500


>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 500 NGTYDYPQY 508


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 500 NGTYDYPQY 508


>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 500 NGTYDYPQY 508


>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 500 NGTYDYPQY 508


>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 489 NGTYDYPQY 497


>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 496 NGTYDYPQY 504


>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 499 NGTYDYPQY 507


>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 497 NGTYDYPKY 505


>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 500 NGTYDYPQY 508


>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 489 NGTYDYPQY 497


>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 489 NGTYDYPQY 497


>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea

Query: 2 NRKYDIPGY 10
N YD P Y
Sbjct: 498 NGTYDYPQY 506




5|SequenceR|30|21|LGRRPLNRKY

>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus

Query: 3 RRPLNRK 9
RRPLNR+
Sbjct: 104 RRPLNRR 110


>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate

Query: 3 RRPLNRK 9
RRPLNR+
Sbjct: 104 RRPLNRR 110


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 RRPLNRKY 10
R PLNR Y
Sbjct: 5497 RPPLNRNY 5504


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 RRPLNRKY 10
R PLNR Y
Sbjct: 5474 RPPLNRNY 5481


>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 2 GRRPLNRKY 10
RRPL R Y
Sbjct: 585 ARRPLARAY 593


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 5 PLNRKY 10
PLNR Y
Sbjct: 5485 PLNRNY 5490


>sp|Y15K_HBVD3|PUTATIVE uncharacterized 15.3 kDa protein|Hepatitis B virus genotype D

Query: 4 RPLNRKY 10
RP+NRK+
Sbjct: 100 RPVNRKF 106


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 1 LGRRPL 6
LGRRP
Sbjct: 9 LGRRPF 14


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 1 LGRRPL 6
LGRRP
Sbjct: 9 LGRRPF 14


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 1 LGRRPL 6
LGRRP
Sbjct: 9 LGRRPF 14


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 4 RPLNR 8
RPLNR
Sbjct: 234 RPLNR 238


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 4 RPLNR 8
RPLNR
Sbjct: 234 RPLNR 238


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 4 RPLNR 8
RPLNR
Sbjct: 234 RPLNR 238


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4 RPLNRK 9
RPLN K
Sbjct: 1110 RPLNEK 1115


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 RPLNRKY 10
RP+NR Y
Sbjct: 401 RPVNRGY 407


>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo

Query: 1 LGRRPLNRKY 10
L P+NR Y
Sbjct: 256 LSGNPVNRDY 265




6|SequenceR|35|26|MSYGSLGRRP

>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1 MSYGSLGRRP 10
+SY S+GR P
Sbjct: 619 LSYRSMGRIP 628


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 1 MSYGSLGRRP 10
+SY S+G P
Sbjct: 620 LSYRSMGEEP 629


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1 MSYGSLGRRP 10
+SY ++GR P
Sbjct: 619 LSYRAMGRIP 628


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 1 MSYGSLGRRP 10
+SY ++GR P
Sbjct: 619 LSYRAMGRIP 628


>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)

Query: 1 MSYGSLGRRP 10
MS+ S G+RP
Sbjct: 398 MSFLSAGQRP 407


>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)

Query: 1 MSYGSLGRRP 10
MS+ S G+RP
Sbjct: 398 MSFLSAGQRP 407


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 1 MSYGSLGRRP 10
+SY S+G P
Sbjct: 620 LSYRSMGEEP 629


>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)

Query: 2 SYGSLGRRP 10
SY SLG P
Sbjct: 629 SYRSLGAEP 637


>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)

Query: 2 SYGSLGRRP 10
SY SLG P
Sbjct: 295 SYRSLGAEP 303


>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)

Query: 3 YGSLGRR 9
+G+LGRR
Sbjct: 579 HGALGRR 585




7|SequenceR|40|31|IGIALMSYGS

>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 1 IGIALMSY 8
+ IALMSY
Sbjct: 742 VTIALMSY 749


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate

Query: 1 IGIALMSY 8
+ IALMSY
Sbjct: 742 VTIALMSY 749


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 1 IGIALMSY 8
+ IALMSY
Sbjct: 742 VTIALMSY 749


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 IGIALMSY 8
+ IALMSY
Sbjct: 742 VTIALMSY 749


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 IGIALMSY 8
+ IALMSY
Sbjct: 734 VTIALMSY 741


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)

Query: 1 IGIALMSY 8
+ IALMSY
Sbjct: 742 VTIALMSY 749


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 1 IGIALMSY 8
+ IALMSY
Sbjct: 742 VTIALMSY 749


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 1 IGIALMSY 8
+ IALMSY
Sbjct: 742 VTIALMSY 749


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 1 IGIALMSY 8
+ IALMSY
Sbjct: 742 VTIALMSY 749


>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63

Query: 1 IGIALMSYGS 10
IG+ M +GS
Sbjct: 204 IGLGAMDFGS 213


>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)

Query: 2 GIALMSY 8
GIA++SY
Sbjct: 1120 GIAVLSY 1126


>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)

Query: 3 IALMSYG 9
IAL SYG
Sbjct: 377 IALSSYG 383


>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /

Query: 3 IALMSYG 9
IAL SYG
Sbjct: 387 IALSSYG 393


>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)

Query: 3 IALMSYG 9
IAL SYG
Sbjct: 387 IALSSYG 393




8|SequenceR|45|36|YILTGIGIAL

>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 ILTGIGIAL 10
ILTG+G L
Sbjct: 578 ILTGLGCTL 586


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 ILTGIGIAL 10
ILTG+G L
Sbjct: 576 ILTGLGCTL 584


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 2 ILTGIGIAL 10
+LTG G+ L
Sbjct: 184 VLTGFGVQL 192


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 2 ILTGIGIAL 10
+LTG G+ L
Sbjct: 184 VLTGFGVQL 192


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 2 ILTGIGIAL 10
+LTG G+ L
Sbjct: 184 VLTGFGVQL 192


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 1 YILTGIGIA 9
Y+L G+G++
Sbjct: 1255 YMLMGLGVS 1263


>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985

Query: 1 YILTGIGIAL 10
+ L+G+ IAL
Sbjct: 8 FALSGVAIAL 17


>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980

Query: 1 YILTGIGIAL 10
+ L+G+ IAL
Sbjct: 8 FALSGVAIAL 17


>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge

Query: 1 YILTGIGIAL 10
+ L+G+ IAL
Sbjct: 8 FALSGVAIAL 17


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 1 YILTGIGIA 9
Y+L G+G++
Sbjct: 1254 YMLMGMGVS 1262


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 1 YILTGIGIA 9
Y+L G+G++
Sbjct: 1254 YMLMGMGVS 1262


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 3 LTGIGIA 9
LTGIG++
Sbjct: 223 LTGIGLS 229


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 2 ILTGIGI 8
+LTG+G+
Sbjct: 1375 VLTGVGL 1381


>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 YILTGIGIAL 10
YIL G+G ++
Sbjct: 256 YILYGLGYSV 265


>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)

Query: 1 YILTGIGIAL 10
YIL G+G ++
Sbjct: 256 YILYGLGYSV 265


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 2 ILTGIG 7
ILTG+G
Sbjct: 2116 ILTGLG 2121




9|SequenceR|50|41|ISWHGYILTG

>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 ISWHGYIL 8
+S+HGY L
Sbjct: 416 VSYHGYYL 423


>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)

Query: 3 WHGYILTG 10
WHGY G
Sbjct: 374 WHGYTSHG 381


>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)

Query: 3 WHGYILTG 10
WHGY G
Sbjct: 382 WHGYTSHG 389


>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)

Query: 3 WHGYILTG 10
WHGY G
Sbjct: 381 WHGYTSHG 388


>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong

Query: 3 WHGYILTG 10
WHGY G
Sbjct: 373 WHGYTSHG 380


>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)

Query: 3 WHGYILTG 10
WHGY G
Sbjct: 381 WHGYTSHG 388


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 3 WHGYILTG 10
WHGY G
Sbjct: 373 WHGYTSHG 380


>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)

Query: 3 WHGYILTG 10
WHGY G
Sbjct: 381 WHGYTSHG 388


>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)

Query: 3 WHGYILTG 10
WHGY G
Sbjct: 372 WHGYTSHG 379


>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)

Query: 3 WHGYILTG 10
WHGY G
Sbjct: 383 WHGYTSHG 390


>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)

Query: 3 WHGYILTG 10
WHGY G
Sbjct: 383 WHGYTSHG 390


>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)

Query: 3 WHGYILTG 10
WHGY G
Sbjct: 376 WHGYTSHG 383


>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)

Query: 3 WHGYILTG 10
WHGY G
Sbjct: 376 WHGYTSHG 383


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 2 SWHGYILTG 10
SWH Y+ +G
Sbjct: 540 SWHIYLKSG 548


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 5 GYILTG 10
GY+LTG
Sbjct: 3483 GYVLTG 3488


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 5 GYILTG 10
GY+LTG
Sbjct: 3453 GYVLTG 3458


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 5 GYILTG 10
GY+LTG
Sbjct: 3483 GYVLTG 3488


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 5 GYILTG 10
GY+LTG
Sbjct: 3433 GYVLTG 3438


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 ISWHGYIL 8
+S+HGY +
Sbjct: 416 VSYHGYYI 423


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 5 GYILTG 10
GY+LTG
Sbjct: 3453 GYVLTG 3458


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 5 GYILTG 10
GY+LTG
Sbjct: 3433 GYVLTG 3438


>sp|VE6_HPV40|PROTEIN E6|Human papillomavirus 40

Query: 2 SWHGYIL 8
SW GY L
Sbjct: 131 SWTGYCL 137


>sp|VE6_HPV07|PROTEIN E6|Human papillomavirus 7

Query: 2 SWHGYIL 8
SW GY L
Sbjct: 131 SWTGYCL 137


>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1 ISWHGYI 7
I+W GY+
Sbjct: 361 ITWTGYL 367


>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)

Query: 1 ISWHGY 6
I WH Y
Sbjct: 65 IYWHAY 70


>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)

Query: 5 GYILTG 10
G+ILTG
Sbjct: 214 GFILTG 219


>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5 GYILTG 10
G+ILTG
Sbjct: 214 GFILTG 219


>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)

Query: 5 GYILTG 10
G+ILTG
Sbjct: 214 GFILTG 219


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 3 WHGYI 7
W GYI
Sbjct: 360 WEGYI 364


>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 2 SWHG 5
SWHG
Sbjct: 97 SWHG 100


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 2 SWHGYILT 9
SW G I+T
Sbjct: 2437 SWTGAIIT 2444


>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 ISWHGYILT 9
+ WHG + T
Sbjct: 360 LRWHGALGT 368


>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 ISWHGYILT 9
+ WHG + T
Sbjct: 360 LRWHGALGT 368




10|SequenceR|55|46|RNWKMISWHG

>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 3 WKMISWHG 10
W+ WHG
Sbjct: 1109 WRCRGWHG 1116


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 1 RNWKMISWH 9
R W + WH
Sbjct: 69 RKWLVSDWH 77


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 1 RNWKMISWH 9
R W + WH
Sbjct: 69 RKWLVSDWH 77


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 1 RNWKMISWH 9
R W + WH
Sbjct: 69 RKWLVSDWH 77


>sp|VE8E2_HPV58|PROTEIN E8^E2C|Human papillomavirus 58

Query: 3 WKMISWH 9
WK+ WH
Sbjct: 6 WKLSRWH 12


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 WKMISWH 9
W +I+W
Sbjct: 2156 WSLIAWQ 2162


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 WKMISWH 9
W +I+W
Sbjct: 2156 WSLIAWQ 2162


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 WKMISWH 9
W +I+W
Sbjct: 2156 WSLIAWQ 2162


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 WKMISWH 9
W +I+W
Sbjct: 2156 WSLIAWQ 2162


>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60

Query: 2 NWKMIS 7
NWK+I+
Sbjct: 398 NWKLIA 403


>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 2 NWKMISW 8
NW I W
Sbjct: 456 NWSNIHW 462


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 2 NWKMISW 8
NW I W
Sbjct: 456 NWSNIHW 462


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 2 NWKMISW 8
NW I W
Sbjct: 456 NWSNIHW 462


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 WKMISWH 9
W +I+W
Sbjct: 1990 WSLIAWQ 1996


>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)

Query: 2 NWKMISW 8
N+K +SW
Sbjct: 357 NYKGVSW 363


>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)

Query: 2 NWKMISW 8
N+K +SW
Sbjct: 357 NYKGVSW 363


>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain

Query: 2 NWKMISW 8
N+K +SW
Sbjct: 357 NYKGVSW 363


>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain

Query: 2 NWKMISW 8
N+K +SW
Sbjct: 357 NYKGVSW 363


>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain

Query: 2 NWKMISW 8
N+K +SW
Sbjct: 357 NYKGVSW 363


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 WKMISWH 9
W +++W
Sbjct: 2156 WSLVAWQ 2162


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 WKMISWH 9
W +++W
Sbjct: 2157 WSLVAWQ 2163


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 WKMISWH 9
W +++W
Sbjct: 2154 WSLVAWQ 2160


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 WKMISWH 9
W +++W
Sbjct: 2157 WSLVAWQ 2163




11|SequenceR|60|51|LRRRERNWKM

>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1 LRRRERNWKM 10
+R +E+NW +
Sbjct: 1257 VRNKEKNWAL 1266


>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 LRRRERNWK 9
LRR + +WK
Sbjct: 651 LRRDDEDWK 659


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 4 RERNWKM 10
RER+W +
Sbjct: 1207 RERSWSL 1213


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 4 RERNWKM 10
RER+W +
Sbjct: 1207 RERSWSL 1213


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 4 RERNWKM 10
RER+W +
Sbjct: 1207 RERSWSL 1213


>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 LRRRERNWK 9
LRR + +WK
Sbjct: 650 LRRDDEDWK 658


>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus

Query: 2 RRRERNWKM 10
RRR R W +
Sbjct: 616 RRRNRFWAL 624


>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)

Query: 4 RERNWKM 10
RE+ WK+
Sbjct: 319 REQAWKL 325


>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)

Query: 4 RERNWKM 10
RE+ WK+
Sbjct: 319 REQAWKL 325


>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate

Query: 6 RNWKM 10
RNWK+
Sbjct: 129 RNWKI 133


>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 LRRRERN 7
L+RR RN
Sbjct: 361 LKRRRRN 367


>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59

Query: 5 ERNWK 9
+RNWK
Sbjct: 600 DRNWK 604


>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)

Query: 4 RERNWKM 10
RE+ WK+
Sbjct: 317 REQAWKL 323


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 1 LRRRERNW 8
L RR++ W
Sbjct: 221 LARRQQGW 228




12|SequenceR|65|56|FDEIQLRRRE

>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 1 FDEIQLRRRE 10
FDE LR+R+
Sbjct: 1677 FDENMLRKRQ 1686


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 2 DEIQLRRR 9
D +QLRR+
Sbjct: 690 DTVQLRRK 697


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 2 DEIQLRRR 9
D +QLRR+
Sbjct: 690 DTVQLRRK 697


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 2 DEIQLRRR 9
D +QLRR+
Sbjct: 692 DTVQLRRK 699


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 2 DEIQLRRR 9
D +QLRR+
Sbjct: 692 DTVQLRRK 699


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 2 DEIQLRRR 9
D +QLRR+
Sbjct: 693 DTVQLRRK 700


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 2 DEIQLRRR 9
D +QLRR+
Sbjct: 693 DTVQLRRK 700


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 2 DEIQLRRR 9
D +QLRR+
Sbjct: 696 DTVQLRRK 703


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 2 DEIQLRRR 9
D +QLRR+
Sbjct: 690 DTVQLRRK 697


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 2 DEIQLRRR 9
D +QLRR+
Sbjct: 668 DMVQLRRK 675


>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 FDEIQLRRR 9
FDEI+ RR+
Sbjct: 89 FDEIRRRRQ 97


>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 FDEIQLRRR 9
FDEI+ RR+
Sbjct: 89 FDEIRRRRQ 97


>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)

Query: 3 EIQLRRRE 10
E+QL RR+
Sbjct: 236 ELQLARRQ 243




13|SequenceR|70|61|AIRAEFDEIQ

>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 2 IRAEFDE 8
++AEFD+
Sbjct: 2263 LKAEFDD 2269


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 IRAEFDEIQ 10
+RAE D+++
Sbjct: 2265 LRAETDDVE 2273




14|SequenceR|75|66|LLPLLAIRAE

>sp|US02_HHV11|PROTEIN US2|Human herpesvirus 1 (strain 17)

Query: 3 PLLAIRAE 10
PL+A+R E
Sbjct: 270 PLIAVRGE 277


>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain

Query: 1 LLPLLAIRA 9
LLP LA+R
Sbjct: 429 LLPALAVRT 437




15|SequenceR|80|71|DTEAQLLPLL

>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 DTEAQLLPLL 10
D+E Q PLL
Sbjct: 253 DSEPQCNPLL 262


>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 DTEAQLLPLL 10
D+E Q PLL
Sbjct: 253 DSEPQCNPLL 262


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1 DTEAQL 6
DTEAQ+
Sbjct: 1838 DTEAQI 1843


>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)

Query: 1 DTEAQLLPLL 10
+T AQL PL+
Sbjct: 307 ETIAQLKPLV 316




16|SequenceR|85|76|QLTRRDTEAQ

***** No hits found ******


17|SequenceR|90|81|NERLMQLTRR

>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 NERLMQLTR 9
N+RL QLTR
Sbjct: 339 NKRLNQLTR 347


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 NERLMQLTR 9
N+RL QLTR
Sbjct: 339 NKRLNQLTR 347


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 1 NERLMQLTR 9
N+RL QLTR
Sbjct: 339 NKRLNQLTR 347


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 1 NERLMQLTR 9
N+RL QLTR
Sbjct: 339 NKRLNQLTR 347


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 1 NERLMQLTR 9
N+RL QLTR
Sbjct: 339 NKRLNQLTR 347


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 1 NERLMQLTR 9
++R+MQ+TR
Sbjct: 79 SDRIMQITR 87


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 1 NERLMQLTR 9
++RL+Q+TR
Sbjct: 79 SDRLIQITR 87


>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A

Query: 1 NERLMQLTR 9
N RL+++TR
Sbjct: 227 NNRLLEITR 235


>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A

Query: 1 NERLMQLTR 9
N RL+++TR
Sbjct: 227 NNRLLEITR 235


>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus

Query: 1 NERLMQLTR 9
N RL+++TR
Sbjct: 227 NNRLLEITR 235


>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B

Query: 1 NERLMQLTR 9
N RL+++TR
Sbjct: 227 NSRLLEITR 235


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1 NERLMQLT 8
++R+MQLT
Sbjct: 79 SDRVMQLT 86


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1 NERLMQLT 8
++R+MQLT
Sbjct: 79 SDRVMQLT 86




18|SequenceR|95|86|AEEELNERLM

>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 EELNERL 9
EELNER+
Sbjct: 903 EELNERV 909


>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 EELNERL 9
EELNER+
Sbjct: 906 EELNERV 912


>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 EELNERL 9
EELNER+
Sbjct: 907 EELNERV 913


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 29 ADEDLNHRV 37


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 29 ADEDLNHRV 37


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 29 ADEDLNHRV 37


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 29 ADEDLNRRV 37


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 29 ADEDLNRRV 37


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 29 ADEDLNRRV 37


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 29 ADEDLNRRV 37


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 29 ADEDLNRRV 37


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 29 ADEDLNRRV 37


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 29 ADEDLNRRV 37


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 29 ADEDLNRRV 37


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 29 ADEDLNRRV 37


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 29 ADEDLNRRV 37


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 29 ADEDLNRRV 37


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 31 ADEDLNRRV 39


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 1 AEEELNERL 9
A+E+LN R+
Sbjct: 31 ADEDLNRRV 39


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 1 AEEELNERL 9
AE+E ERL
Sbjct: 493 AEQEEKERL 501


>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 EEELNE 7
E+ELNE
Sbjct: 303 EDELNE 308


>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 EEELNE 7
E+ELNE
Sbjct: 303 EDELNE 308


>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 1 AEEELNER 8
AEEE +ER
Sbjct: 54 AEEEEDER 61


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1 AEEELNERL 9
AEE+ NER
Sbjct: 1257 AEEKCNERF 1265




19|SequenceR|100|91|DKMIIAEEEL

>sp|PG067_VARV|PROTEIN OPG067|Variola virus

Query: 1 DKMIIAEEE 9
DKM+IAE +
Sbjct: 204 DKMLIAESD 212


>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 DKMIIAEEE 9
DKM+IAE +
Sbjct: 204 DKMLIAESD 212


>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 DKMIIAEEE 9
DKM+IAE +
Sbjct: 204 DKMLIAESD 212


>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)

Query: 1 DKMIIAEEE 9
DKM+IAE +
Sbjct: 204 DKMLIAESD 212


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 1 DKMIIAEEE 9
DK+I EEE
Sbjct: 342 DKIIEKEEE 350




20|SequenceR|105|96|KWDPVDKMII

>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1

Query: 2 WDPVDKMII 10
WDP+D +I
Sbjct: 56 WDPIDGRVI 64


>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1

Query: 2 WDPVDKMII 10
WDP+D +I
Sbjct: 56 WDPIDGRVI 64


>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1

Query: 2 WDPVDKMII 10
WDP+D +I
Sbjct: 56 WDPIDGRVI 64


>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3

Query: 2 WDPVDKMII 10
WDP+D ++
Sbjct: 56 WDPIDGRVV 64


>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3

Query: 2 WDPVDKMII 10
WDP+D ++
Sbjct: 56 WDPIDGRVV 64


>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)

Query: 2 WDPVD 6
WDPVD
Sbjct: 307 WDPVD 311


>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2

Query: 2 WDPVDKMII 10
WDP+D ++
Sbjct: 56 WDPIDGRVV 64


>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)

Query: 1 KWDPVDKMI 9
KW VD+M+
Sbjct: 363 KWQEVDEML 371


>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)

Query: 1 KWDPVDKMI 9
KW VD+M+
Sbjct: 363 KWQEVDEML 371


>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)

Query: 1 KWDPVDKMI 9
KW VD+M+
Sbjct: 368 KWQEVDEML 376


>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)

Query: 1 KWDPVDKMI 9
KW VD+M+
Sbjct: 368 KWQEVDEML 376


>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)

Query: 1 KWDPVDKMI 9
KW VD+M+
Sbjct: 367 KWQEVDEML 375


>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)

Query: 1 KWDPVDKMI 9
KW VD+M+
Sbjct: 368 KWQEVDEML 376


>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)

Query: 1 KWDPVDKMI 9
KW P DK++
Sbjct: 269 KWCPPDKLV 277


>sp|BEL3_FOAMV|PROTEIN Bel-3|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1 KWDPVDKMII 10
KW P +MII
Sbjct: 143 KWSPKAEMII 152


>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)

Query: 2 WDPVD 6
WDP+D
Sbjct: 307 WDPLD 311


>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2

Query: 1 KWDPVDKMI 9
KW VD+M+
Sbjct: 349 KWREVDEML 357


>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 2 WDPVD 6
WDP+D
Sbjct: 307 WDPLD 311


>sp|BDL35_EBVB9|LATE gene expression regulator BDLF3.5|Epstein-Barr virus (strain

Query: 2 WDPVD 6
WDP D
Sbjct: 28 WDPTD 32


>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])

Query: 2 WDPVD 6
WDP+D
Sbjct: 307 WDPLD 311


>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])

Query: 2 WDPVD 6
WDP+D
Sbjct: 307 WDPLD 311


>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])

Query: 2 WDPVD 6
WDP+D
Sbjct: 307 WDPLD 311


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 2 WDPVD 6
WDP D
Sbjct: 2820 WDPAD 2824


>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)

Query: 2 WDPVD 6
WDP+D
Sbjct: 307 WDPLD 311


>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])

Query: 2 WDPVD 6
WDP+D
Sbjct: 307 WDPLD 311


>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 2 WDPVD 6
WDP+D
Sbjct: 307 WDPLD 311


>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])

Query: 2 WDPVD 6
WDP+D
Sbjct: 307 WDPLD 311


>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])

Query: 2 WDPVD 6
WDP+D
Sbjct: 307 WDPLD 311


>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])

Query: 2 WDPVD 6
WDP+D
Sbjct: 307 WDPLD 311


>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)

Query: 2 WDPVD 6
WDP+D
Sbjct: 307 WDPLD 311


>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])

Query: 2 WDPVD 6
WDP+D
Sbjct: 307 WDPLD 311


>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)

Query: 1 KWDPVD 6
K+DPVD
Sbjct: 243 KFDPVD 248


>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)

Query: 1 KWDPVDKMI 9
KW P D+++
Sbjct: 269 KWCPPDQLV 277


>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)

Query: 1 KWDPVDKMI 9
KW P D+++
Sbjct: 269 KWCPPDQLV 277


>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)

Query: 1 KWDPVD 6
K+DPVD
Sbjct: 243 KFDPVD 248


>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)

Query: 1 KWDPVD 6
K+DPVD
Sbjct: 243 KFDPVD 248


>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)

Query: 2 WDPVD 6
WDP D
Sbjct: 307 WDPFD 311


>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)

Query: 1 KWDPVDKMI 9
KW P D+++
Sbjct: 269 KWCPPDQLV 277


>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)

Query: 1 KWDPVDKMI 9
KW P D+++
Sbjct: 269 KWCPPDQLV 277


>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)

Query: 1 KWDPVDKMI 9
KW P D+++
Sbjct: 269 KWCPPDQLV 277


>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 1 KWDPVDKMI 9
KW P D+++
Sbjct: 269 KWCPPDQLV 277


>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)

Query: 1 KWDPVDKMI 9
KW P D+++
Sbjct: 269 KWCPPDQLV 277


>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)

Query: 1 KWDPVDKMI 9
KW P D+++
Sbjct: 269 KWCPPDQLV 277


>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41

Query: 3 DPVDKMII 10
DP+ K+II
Sbjct: 439 DPLPKLII 446


>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)

Query: 1 KWDPVDKMI 9
KW P D+++
Sbjct: 269 KWCPPDQLV 277


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 DPVDKMII 10
DP D MI+
Sbjct: 402 DPSDSMIL 409


>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 DPVDKMII 10
+PV +MI+
Sbjct: 327 EPVSRMIV 334


>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 DPVDKMII 10
+PV +MI+
Sbjct: 327 EPVSRMIV 334


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 2 WDPVD 6
WDP++
Sbjct: 1696 WDPIE 1700


>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45

Query: 1 KWDPVDKM 8
K DP DK+
Sbjct: 467 KQDPYDKL 474




21|SequenceR|110|101|VSEGVKWDPV

>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 127 EGVNWSP 133


>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 128 EGVNWSP 134


>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 128 EGVNWSP 134


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 VSEGVKWDPV 10
+S+G KWD V
Sbjct: 6110 MSKGQKWDVV 6119


>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 115 EGVNWSP 121


>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 115 EGVNWSP 121


>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 115 EGVNWSP 121


>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 115 EGVNWSP 121


>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 115 EGVNWSP 121


>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 121 EGVNWSP 127


>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 115 EGVNWSP 121


>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 121 EGVNWSP 127


>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 115 EGVNWSP 121


>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 115 EGVNWSP 121


>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 114 EGVNWSP 120


>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 114 EGVNWSP 120


>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)

Query: 3 EGVKWDP 9
EGV W P
Sbjct: 114 EGVNWSP 120


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 VSEGVKWDPV 10
+S+G KWD V
Sbjct: 6090 MSKGQKWDIV 6099


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 VSEGVKWDPV 10
+S+G KWD V
Sbjct: 6140 MSKGQKWDIV 6149


>sp|NCAP_BUNSH|NUCLEOPROTEIN snowshoe hare

Query: 2 SEGVKWD 8
S GV+WD
Sbjct: 130 SNGVRWD 136


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 1 VSEGVKWDPV 10
V EG W P+
Sbjct: 414 VDEGGDWKPI 423


>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain

Query: 2 SEGVKWD 8
SEG +WD
Sbjct: 204 SEGPQWD 210


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 1 VSEGVKWDPV 10
V EG W P+
Sbjct: 415 VDEGGDWRPI 424


>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain

Query: 4 GVKWDPV 10
G KW P+
Sbjct: 278 GTKWSPL 284


>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain

Query: 4 GVKWDPV 10
G KW P+
Sbjct: 278 GTKWSPL 284


>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain

Query: 4 GVKWDPV 10
G KW P+
Sbjct: 278 GTKWSPL 284


>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)

Query: 4 GVKWDPV 10
G KW P+
Sbjct: 278 GTKWSPL 284


>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)

Query: 4 GVKWDPV 10
G KW P+
Sbjct: 278 GTKWSPL 284


>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain

Query: 2 SEGVKWD 8
SEG +WD
Sbjct: 204 SEGPQWD 210


>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5 VKWDPV 10
V WDP+
Sbjct: 199 VSWDPI 204


>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5 VKWDPV 10
V WDP+
Sbjct: 210 VSWDPI 215


>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)

Query: 3 EGVKWDPV 10
EG WD +
Sbjct: 153 EGTAWDEI 160


>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59

Query: 1 VSEGVKWDPV 10
+ EG W P+
Sbjct: 427 IEEGGDWKPI 436


>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)

Query: 1 VSEGVKWDP 9
+ EGV W P
Sbjct: 451 ILEGVVWRP 459


>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)

Query: 1 VSEGVKWDP 9
+ EGV W P
Sbjct: 450 ILEGVVWRP 458


>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain

Query: 3 EGVKWDP 9
+GV W P
Sbjct: 359 KGVSWSP 365


>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1

Query: 5 VKWDPV 10
+ WDP+
Sbjct: 54 ITWDPI 59


>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1

Query: 5 VKWDPV 10
+ WDP+
Sbjct: 54 ITWDPI 59


>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18

Query: 1 VSEGVKWDPV 10
+ EG W P+
Sbjct: 440 IDEGGDWRPI 449


>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)

Query: 3 EGVKWDP 9
+GV W P
Sbjct: 359 KGVSWSP 365


>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain

Query: 3 EGVKWDP 9
+GV W P
Sbjct: 359 KGVSWSP 365


>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1

Query: 5 VKWDPV 10
+ WDP+
Sbjct: 54 ITWDPI 59


>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain

Query: 3 EGVKWDP 9
+GV W P
Sbjct: 359 KGVSWSP 365


>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)

Query: 3 EGVKWDP 9
+GV W P
Sbjct: 359 KGVSWSP 365


>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3

Query: 5 VKWDPV 10
+ WDP+
Sbjct: 54 ITWDPI 59


>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45

Query: 1 VSEGVKWDPV 10
+ EG W P+
Sbjct: 426 IDEGGDWRPI 435


>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3

Query: 5 VKWDPV 10
+ WDP+
Sbjct: 54 ITWDPI 59


>sp|ORF23_TTVV5|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 6 KWDP 9
KWDP
Sbjct: 157 KWDP 160


>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)

Query: 6 KWDPV 10
KW+PV
Sbjct: 229 KWNPV 233


>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37

Query: 2 SEGVKWDP 9
++G K+DP
Sbjct: 5 TKGTKFDP 12


>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)

Query: 6 KWDPV 10
KW+PV
Sbjct: 229 KWNPV 233


>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17

Query: 2 SEGVKWDP 9
++G K+DP
Sbjct: 5 NKGTKFDP 12


>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)

Query: 1 VSEGVKWDP 9
+ EGV W P
Sbjct: 450 ILEGVVWCP 458


>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)

Query: 1 VSEGVKW 7
VSE +KW
Sbjct: 168 VSEVLKW 174


>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)

Query: 6 KWDPV 10
KW+P+
Sbjct: 229 KWNPI 233


>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)

Query: 6 KWDPV 10
KW+P+
Sbjct: 229 KWNPI 233


>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)

Query: 6 KWDPV 10
KW+P+
Sbjct: 229 KWNPI 233




22|SequenceR|115|106|RTTHFVSEGV

>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United

Query: 3 THFVSE 8
THFVSE
Sbjct: 458 THFVSE 463


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2 TTHFVSEGV 10
+ HF SEGV
Sbjct: 3378 SAHFESEGV 3386


>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 227 TTHYVSQ 233


>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 234 TTHYVSQ 240


>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 234 TTHYVSQ 240


>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 219 TTHYVSQ 225


>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 235 TTHYVSQ 241


>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 234 TTHYVSQ 240


>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 234 TTHYVSQ 240


>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 226 TTHYVSQ 232


>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 236 TTHYVSQ 242


>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 234 TTHYVSQ 240


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 226 TTHYVSQ 232


>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 229 TTHYVSQ 235


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 4 HFVSEGV 10
HF+S+G+
Sbjct: 1716 HFISQGL 1722


>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 219 TTHYVSQ 225


>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 236 TTHYVSQ 242


>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 229 TTHYVSQ 235


>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 234 TTHYVSQ 240


>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 234 TTHYVSQ 240


>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 234 TTHYVSQ 240


>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 231 TTHYVSQ 237


>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 234 TTHYVSQ 240


>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 225 TTHYVSQ 231


>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 221 TTHYVSQ 227


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 4 HFVSEGV 10
HF+S+G+
Sbjct: 1716 HFISQGL 1722


>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 234 TTHYVSQ 240


>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 234 TTHYVSQ 240


>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 234 TTHYVSQ 240


>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 236 TTHYVSQ 242


>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 234 TTHYVSQ 240


>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 236 TTHYVSQ 242


>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 221 TTHYVSQ 227


>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 221 TTHYVSQ 227


>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 228 TTHYVSQ 234


>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 229 TTHYVSQ 235


>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 236 TTHYVSQ 242


>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 232 TTHYVSQ 238


>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 221 TTHYVSQ 227


>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 221 TTHYVSQ 227


>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 221 TTHYVSQ 227


>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 221 TTHYVSQ 227


>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3

Query: 1 RTTHFVSEG 9
R H V+EG
Sbjct: 369 RKVHLVNEG 377


>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)

Query: 2 TTHFVSE 8
TTH+VS+
Sbjct: 221 TTHYVSQ 227


>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus

Query: 1 RTTHFVS 7
RT HF+S
Sbjct: 137 RTRHFLS 143


>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 RTTHFVS 7
RT HF+S
Sbjct: 137 RTRHFLS 143


>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 RTTHFVS 7
RT HF+S
Sbjct: 137 RTRHFLS 143


>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)

Query: 1 RTTHFVS 7
RT HF+S
Sbjct: 140 RTRHFLS 146


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1 RTTHFVSEG 9
+TT+FV+E
Sbjct: 1578 KTTNFVNEA 1586


>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 RTTHFVSE 8
+ HFVSE
Sbjct: 247 KEDHFVSE 254


>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 TTHFVS 7
TTHF+S
Sbjct: 221 TTHFIS 226


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 4 HFVSEGV 10
H+V EGV
Sbjct: 1776 HYVFEGV 1782


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 4 HFVSEGV 10
H+V EGV
Sbjct: 1776 HYVFEGV 1782


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 4 HFVSEGV 10
H+V EGV
Sbjct: 1779 HYVFEGV 1785


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 4 HFVSEGV 10
H+V EGV
Sbjct: 1777 HYVFEGV 1783


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 4 HFVSEGV 10
H+V EGV
Sbjct: 1777 HYVFEGV 1783


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 4 HFVSEGV 10
H+V EGV
Sbjct: 1779 HYVFEGV 1785


>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)

Query: 1 RTTHFVSE 8
+ HFVSE
Sbjct: 247 KEDHFVSE 254


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 4 HFVSEGV 10
H+V EGV
Sbjct: 1776 HYVFEGV 1782


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 HFVSEGV 10
H VS+G+
Sbjct: 1160 HLVSQGI 1166


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 HFVSEGV 10
H VS+G+
Sbjct: 1160 HLVSQGI 1166


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 HFVSEGV 10
H VS+G+
Sbjct: 1159 HLVSQGI 1165


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 HFVSEGV 10
H VS+G+
Sbjct: 1161 HLVSQGI 1167


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 HFVSEGV 10
H VS+G+
Sbjct: 1158 HLVSQGI 1164


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 HFVSEGV 10
H VS+G+
Sbjct: 1160 HLVSQGI 1166


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 HFVSEGV 10
H VS+G+
Sbjct: 1161 HLVSQGI 1167


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 HFVSEGV 10
H VS+G+
Sbjct: 1158 HLVSQGI 1164


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 HFVSEGV 10
H VS+G+
Sbjct: 1159 HLVSQGI 1165


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 HFVSEGV 10
H VS+G+
Sbjct: 1159 HLVSQGI 1165


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 HFVSEGV 10
H VS+G+
Sbjct: 1159 HLVSQGI 1165


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 HFVSEGV 10
H VS+G+
Sbjct: 1160 HLVSQGI 1166


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 3 THFVS 7
THFVS
Sbjct: 1107 THFVS 1111


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 3 THFVSEGV 10
+HF +GV
Sbjct: 768 SHFTQDGV 775




23|SequenceR|120|111|LPPVWRTTHF

>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)

Query: 3 PVWRTTHF 10
PVWRTT F
Sbjct: 684 PVWRTTGF 691


>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 3 PVWRTTHF 10
PVWRTT F
Sbjct: 684 PVWRTTGF 691


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1 LPPVWRTTHF 10
+PP+WR+ +
Sbjct: 62 VPPIWRSKEW 71


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1 LPPVWRTTHF 10
+PP+WR+ +
Sbjct: 62 VPPIWRSKEW 71


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2 PPVWRTTH 9
PP+W H
Sbjct: 171 PPMWEIHH 178


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PPVWRTTH 9
PP+W H
Sbjct: 171 PPMWEIHH 178


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 PPVWRTTH 9
PP+W H
Sbjct: 171 PPMWEIHH 178


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 1 LPPVWRTTHF 10
+PP+W+ ++
Sbjct: 59 VPPIWKAKNW 68


>sp|PG065_MONPV|RNA-BINDING protein OPG065|Monkeypox virus (MPXV)

Query: 2 PPVWRTT 8
PP W TT
Sbjct: 26 PPRWSTT 32


>sp|U91_HHV6U|UNCHARACTERIZED protein U91|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 PPVW 5
PPVW
Sbjct: 91 PPVW 94


>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)

Query: 1 LPPVWRTTH 9
L P W+ TH
Sbjct: 118 LLPGWKLTH 126


>sp|ST_POVK6|SMALL t antigen|KI polyomavirus (isolate Stockholm 60)

Query: 2 PPVW 5
PPVW
Sbjct: 146 PPVW 149


>sp|ST_POVK3|SMALL t antigen|KI polyomavirus (isolate Stockholm 380)

Query: 2 PPVW 5
PPVW
Sbjct: 146 PPVW 149


>sp|ST_POVKI|SMALL t antigen|KI polyomavirus (isolate Stockholm 350)

Query: 2 PPVW 5
PPVW
Sbjct: 146 PPVW 149


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 WRTTHF 10
W T HF
Sbjct: 720 WMTQHF 725


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 WRTTHF 10
W T HF
Sbjct: 720 WMTQHF 725


>sp|NP1_HBOC1|NON-STRUCTURAL protein NP-1|Primate bocaparvovirus 1 (strain Human

Query: 5 WRTTH 9
W+TTH
Sbjct: 28 WQTTH 32


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 5 WRTTHF 10
WR HF
Sbjct: 505 WRDKHF 510


>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2

Query: 5 WRTTHF 10
W +THF
Sbjct: 122 WNSTHF 127


>sp|REV_HV2D2|PROTEIN Rev|Human immunodeficiency virus type 2

Query: 1 LPPVW 5
+PPVW
Sbjct: 101 VPPVW 105


>sp|REV_HV2UC|PROTEIN Rev|Human immunodeficiency virus type 2

Query: 1 LPPVW 5
+PPVW
Sbjct: 98 IPPVW 102




24|SequenceR|125|116|YLEGILPPVW

>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 YLEGILPPV 9
Y GI+PPV
Sbjct: 433 YTPGIIPPV 441


>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 YLEGILPPV 9
Y GI+PPV
Sbjct: 433 YTPGIIPPV 441


>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 YLEGILPPV 9
Y GI+PPV
Sbjct: 433 YTPGIIPPV 441


>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 YLEGILPPV 9
Y GI+PPV
Sbjct: 433 YTPGIIPPV 441


>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate

Query: 1 YLEGILPPV 9
Y GI+PPV
Sbjct: 433 YTPGIIPPV 441


>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 YLEGILPPV 9
Y G++PPV
Sbjct: 433 YTPGVIPPV 441


>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 1 YLEGILPPV 9
Y G++PPV
Sbjct: 433 YTPGVIPPV 441


>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 YLEGILPPV 9
Y G++PPV
Sbjct: 433 YTPGVIPPV 441


>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 YLEGILPPV 9
Y G++PPV
Sbjct: 433 YTPGVIPPV 441


>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 YLEGILPPV 9
Y G++PPV
Sbjct: 433 YTPGVIPPV 441


>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 YLEGILPPV 9
Y G++PPV
Sbjct: 433 YTPGVIPPV 441


>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 YLEGILPPV 9
Y G++PPV
Sbjct: 433 YTPGVIPPV 441


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 3 EGILPPVW 10
EG+L P W
Sbjct: 1554 EGLLEPAW 1561


>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1 YLEGILPP 8
Y+ G+LPP
Sbjct: 439 YVIGLLPP 446


>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 LEGILPP 8
+EG LPP
Sbjct: 248 VEGALPP 254


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 4 GILPP 8
GILPP
Sbjct: 367 GILPP 371


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3 EGILPP 8
+G+LPP
Sbjct: 3826 QGLLPP 3831


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3 EGILPP 8
+G+LPP
Sbjct: 3803 QGLLPP 3808


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 EGILPP 8
+G+LPP
Sbjct: 3826 QGLLPP 3831


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 EGILPP 8
+G+LPP
Sbjct: 3803 QGLLPP 3808


>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 LEGILPPVW 10
+ G LP VW
Sbjct: 738 VNGFLPVVW 746


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 4 GILPP 8
GILPP
Sbjct: 1170 GILPP 1174


>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)

Query: 3 EGILPPVW 10
+G+LPP W
Sbjct: 292 DGVLPPHW 299


>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 LEGILPPVW 10
+ G LP VW
Sbjct: 752 VNGFLPLVW 760


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 2 LEGILP 7
LEG+LP
Sbjct: 544 LEGLLP 549


>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1

Query: 4 GILPP 8
G+LPP
Sbjct: 203 GVLPP 207


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 5 ILPPVW 10
+LP VW
Sbjct: 838 VLPSVW 843


>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)

Query: 4 GILPPVW 10
G+LPP W
Sbjct: 294 GVLPPHW 300


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 5 ILPPVW 10
+LP VW
Sbjct: 820 VLPAVW 825


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 5 ILPPVW 10
+LP VW
Sbjct: 820 VLPAVW 825


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 5 ILPPVW 10
+LP VW
Sbjct: 820 VLPAVW 825


>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)

Query: 5 ILPPVW 10
++PP W
Sbjct: 160 VIPPQW 165


>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 5 ILPPVW 10
++PP W
Sbjct: 160 VIPPQW 165


>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62

Query: 4 GILPP 8
G+LPP
Sbjct: 405 GVLPP 409


>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 EGILPPV 9
EG+ PP+
Sbjct: 475 EGLYPPL 481




25|SequenceR|130|121|TTRLGYLEGI

>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 4 LGYLEG 9
LGYLEG
Sbjct: 1050 LGYLEG 1055


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 4 LGYLEG 9
LGYLEG
Sbjct: 1050 LGYLEG 1055


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 4 LGYLEG 9
LGYLEG
Sbjct: 1050 LGYLEG 1055


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 4 LGYLEG 9
LGYLEG
Sbjct: 1050 LGYLEG 1055


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 4 LGYLEG 9
LGYLEG
Sbjct: 1050 LGYLEG 1055


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 4 LGYLEG 9
LGYLEG
Sbjct: 1047 LGYLEG 1052


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 4 LGYLEG 9
LGYLEG
Sbjct: 1047 LGYLEG 1052


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 4 LGYLEG 9
LGYLEG
Sbjct: 1048 LGYLEG 1053


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 4 LGYLEG 9
LGYLEG
Sbjct: 1047 LGYLEG 1052


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 4 LGYLEG 9
LGYLEG
Sbjct: 1047 LGYLEG 1052


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 4 LGYLEG 9
LGYLEG
Sbjct: 1048 LGYLEG 1053


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 4 LGYLEGI 10
+G+LEGI
Sbjct: 1454 VGFLEGI 1460


>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14

Query: 2 TRLGY 6
TRLGY
Sbjct: 52 TRLGY 56


>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21

Query: 2 TRLGY 6
TRLGY
Sbjct: 52 TRLGY 56


>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 TRLGYL 7
TRLG+L
Sbjct: 604 TRLGFL 609


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2 TRLGYL 7
TR+GYL
Sbjct: 1281 TRVGYL 1286


>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25

Query: 2 TRLGY 6
TRLGY
Sbjct: 52 TRLGY 56


>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)

Query: 3 RLGYLEG 9
+LGY EG
Sbjct: 46 QLGYTEG 52


>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12

Query: 2 TRLGY 6
TRLGY
Sbjct: 52 TRLGY 56


>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36

Query: 2 TRLGY 6
TRLGY
Sbjct: 52 TRLGY 56




26|SequenceR|135|126|HLAEETTRLG

>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 AEETTRLG 10
AEE RLG
Sbjct: 155 AEEAERLG 162


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 3 AEETTRL 9
+EETT+L
Sbjct: 1711 SEETTKL 1717




27|SequenceR|144|131|TYWMFGHSAHLAEE

>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 2 YWMFGHSAHLAEE 14
YW F H + +E
Sbjct: 132 YWKFQHDVNFTQE 144


>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)

Query: 3 WMFGHSAHLAE 13
W++GH+ ++E
Sbjct: 17 WLYGHNFIMSE 27


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 2 YWMFG 6
YWM+G
Sbjct: 1797 YWMYG 1801


>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2 YWMFGHSAHLA 12
Y +FG S HL+
Sbjct: 14 YTLFGTSCHLS 24


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2 YWMFGHSAHLA 12
Y +FG S HL+
Sbjct: 14 YTLFGTSCHLS 24


>sp|U18_HHV6Z|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (strain Z29)

Query: 3 WMFGHSA 9
W+ GHSA
Sbjct: 128 WLEGHSA 134


>sp|U18_HHV6H|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (HHV-6 variant

Query: 3 WMFGHSA 9
W+ GHSA
Sbjct: 128 WLEGHSA 134


>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P

Query: 2 YWMFGHS 8
YW GHS
Sbjct: 283 YWSSGHS 289


>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United

Query: 6 GHSAHLA 12
GH+ HLA
Sbjct: 412 GHNVHLA 418


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 9 AHLAEE 14
AHLAEE
Sbjct: 365 AHLAEE 370


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 9 AHLAEE 14
AHLAEE
Sbjct: 365 AHLAEE 370


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 9 AHLAEE 14
AHLAEE
Sbjct: 365 AHLAEE 370


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 9 AHLAEE 14
AHLAEE
Sbjct: 365 AHLAEE 370


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 9 AHLAEE 14
AHLAEE
Sbjct: 365 AHLAEE 370


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 9 AHLAEE 14
AHLAEE
Sbjct: 365 AHLAEE 370


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 9 AHLAEE 14
AHLAEE
Sbjct: 365 AHLAEE 370


>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human

Query: 1 TYWMFGHS 8
T WM+ HS
Sbjct: 537 TCWMYLHS 544


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 9 AHLAEE 14
AHLAEE
Sbjct: 365 AHLAEE 370


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 9 AHLAEE 14
AHLAEE
Sbjct: 365 AHLAEE 370


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 9 AHLAEE 14
AHLAEE
Sbjct: 365 AHLAEE 370


>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)

Query: 2 YWMFGHSAHL 11
+ M GH+ HL
Sbjct: 24 FVMTGHNQHL 33


>sp|E1BS_ADE07|E1B protein, small T-antigen|Human adenovirus B serotype 7

Query: 5 FGHSAHLAEE 14
GH AH E+
Sbjct: 67 LGHQAHFKEK 76


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 4 MFGHSAHLAEE 14
M +S H AEE
Sbjct: 460 MMRYSVHKAEE 470


>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)

Query: 1 TYWMFGH 7
T W+FG+
Sbjct: 59 TVWLFGN 65


>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate

Query: 1 TYWMFGH 7
T W+FG+
Sbjct: 59 TVWLFGN 65


>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1 TYWMFGHSAHLAEE 14
T W G + H A +
Sbjct: 388 TCWNCGKAGHTARQ 401


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 TYWMFGHSAHLAEE 14
T W G + H A +
Sbjct: 388 TCWNCGKAGHTARQ 401




THE END