NDUAC_HUMAN Blast Output
Archaea
1|Sequence|1|10|MELVQVLKRG

>sp|MCRG_METVO|METHYL-COENZYME M reductase subunit gamma|Methanococcus voltae

Query: 1 MELVQVLKR 9
ME+V+V+KR
Sbjct: 232 MEVVEVVKR 240


>sp|HEM4_METTH|PUTATIVE uroporphyrinogen-III synthase|Methanothermobacter

Query: 2 ELVQVLKR 9
EL++VLKR
Sbjct: 201 ELIEVLKR 208


>sp|Y1638_PYRFU|MEMO1 family protein PF1638|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ELVQVLKR 9
ELV++LKR
Sbjct: 17 ELVEMLKR 24


>sp|Y988_METJA|UNCHARACTERIZED protein MJ0988|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MELVQVLKR 9
MEL++ LKR
Sbjct: 1 MELLEYLKR 9


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ELVQVLKRG 10
+L+Q+LKR
Sbjct: 21 KLIQILKRA 29




2|Sequence|6|15|VLKRGLQQIT

>sp|Y1154_METJA|UNCHARACTERIZED protein MJ1154|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLKRGLQQI 9
+LK+G+Q I
Sbjct: 183 ILKKGIQAI 191


>sp|Y4660_METAC|UPF0200 protein MA_4660|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VLKRGLQ 7
VLKRGL+
Sbjct: 40 VLKRGLE 46


>sp|Y1313_METMA|UPF0200 protein MM_1313|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VLKRGLQ 7
VLKRGL+
Sbjct: 40 VLKRGLE 46




3|Sequence|11|20|LQQITGHGGL

>sp|KAD_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 QITGHGGL 10
QI GHGG+
Sbjct: 192 QINGHGGI 199


>sp|IF1A_METST|TRANSLATION initiation factor 1A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LQQITGHGGL 10
++QI GHG L
Sbjct: 37 VEQILGHGKL 46


>sp|TRM14_PYRFU|TRNA (guanine(6)-N2)-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 2 QQITGHGGL 10
++ GHGGL
Sbjct: 349 HRVIGHGGL 357


>sp|Y207_METJA|UNCHARACTERIZED protein MJ0207|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQQITGHGG 9
L+ ITGHG
Sbjct: 29 LKLITGHGA 37


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LQQITGH 7
LQQIT H
Sbjct: 388 LQQITSH 394


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 LQQITGH 7
LQQIT H
Sbjct: 385 LQQITSH 391


>sp|IF1A_METTH|TRANSLATION initiation factor 1A|Methanothermobacter thermautotrophicus

Query: 1 LQQITGHGGL 10
++QI GHG L
Sbjct: 25 VEQIMGHGKL 34


>sp|RADB_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 1 LQQITGHGG 9
+ QI GHGG
Sbjct: 26 VTQIYGHGG 34


>sp|FTSZ2_ARCFU|CELL division protein FtsZ 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LQQITGHGGL 10
++ I GHGG+
Sbjct: 230 VKAIMGHGGV 239


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 5 TGHGG 9
TGHGG
Sbjct: 264 TGHGG 268


>sp|XERA_METTH|TYROSINE recombinase XerA|Methanothermobacter thermautotrophicus (strain

Query: 1 LQQITGHGGL 10
+QQ+ GH L
Sbjct: 278 IQQLLGHSNL 287


>sp|HPRL_HALUD|HGPRTASE-LIKE protein|Halorhabdus utahensis (strain DSM 12940

Query: 1 LQQITGH 7
LQQ+TG+
Sbjct: 95 LQQVTGY 101


>sp|ENGB_HALWD|PROBABLE GTP-binding protein EngB|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LQQITGHGGL 10
++++TGH G
Sbjct: 25 MRELTGHTGF 34


>sp|GGGPS_SACS2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 ITGHGG 9
I GHGG
Sbjct: 142 IVGHGG 147


>sp|GGGPS_SACI7|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 ITGHGG 9
I GHGG
Sbjct: 142 IVGHGG 147


>sp|GGGPS_SACI6|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 ITGHGG 9
I GHGG
Sbjct: 142 IVGHGG 147


>sp|GGGPS_SACI4|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 ITGHGG 9
I GHGG
Sbjct: 142 IVGHGG 147


>sp|GGGPS_SACI3|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.27)

Query: 4 ITGHGG 9
I GHGG
Sbjct: 142 IVGHGG 147


>sp|GGGPS_SACI2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 ITGHGG 9
I GHGG
Sbjct: 142 IVGHGG 147


>sp|GGGPS_SACI1|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 ITGHGG 9
I GHGG
Sbjct: 142 IVGHGG 147


>sp|HPRT_METFV|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermus fervidus (strain ATCC

Query: 1 LQQITGHG 8
++Q+TG+G
Sbjct: 96 IRQVTGYG 103


>sp|GGGPS_SULTO|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 ITGHGG 9
I GHGG
Sbjct: 128 IVGHGG 133


>sp|GGGPS_METS5|GERANYLGERANYLGLYCERYL phosphate synthase|Metallosphaera sedula (strain ATCC 51363

Query: 4 ITGHGG 9
I GHGG
Sbjct: 135 IVGHGG 140


>sp|Y4659_METAC|UPF0201 protein MA_4659|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 QITGHGGL 10
++TG GGL
Sbjct: 56 RLTGEGGL 63




4|Sequence|16|25|GHGGLRGYLR

>sp|DEOC_THEVO|DEOXYRIBOSE-PHOSPHATE aldolase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 HGGLRGYLR 10
H GL+ YLR
Sbjct: 14 HSGLKPYLR 22


>sp|PURO_THEKO|IMP cyclohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HGGLRGYL 9
HGG RG+L
Sbjct: 114 HGGRRGWL 121


>sp|MTAD_THEKO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GGLRGYL 9
GLRGYL
Sbjct: 133 AGLRGYL 139


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 4 GLRGYL 9
GLRGYL
Sbjct: 134 GLRGYL 139


>sp|MALF_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 4 GLRGYLR 10
GLR YLR
Sbjct: 58 GLRNYLR 64


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 1 GHGGLRGYLR 10
G GG+ GY R
Sbjct: 172 GDGGITGYRR 181


>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 2 HGGLRGYLR 10
HG L+ YLR
Sbjct: 40 HGTLQRYLR 48


>sp|RL22_NANEQ|LARGE ribosomal subunit protein uL22|Nanoarchaeum equitans (strain

Query: 1 GHGGLRGY 8
H G+RGY
Sbjct: 118 AHKGVRGY 125


>sp|IDI2_METJA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GHGGLRGYL 9
G GG+RG L
Sbjct: 275 GSGGIRGGL 283


>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GGLRGY 8
GGLRG+
Sbjct: 469 GGLRGF 474


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC

Query: 1 GHGGLRGYLR 10
GH LR Y+R
Sbjct: 81 GHELLRDYIR 90


>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GGLRGYL 9
GGL GYL
Sbjct: 106 GGLVGYL 112


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GHGGLR 6
GHGG+R
Sbjct: 83 GHGGMR 88


>sp|Y748_THEPD|PROTEIN Tpen_0748|Thermofilum pendens (strain DSM 2475

Query: 2 HGGLRGY 8
HGGL+ Y
Sbjct: 183 HGGLKVY 189


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GGLRGYLR 10
GG+ GY R
Sbjct: 864 GGIEGYRR 871


>sp|DPCKG_THEPD|GTP-DEPENDENT dephospho-CoA kinase|Thermofilum pendens (strain DSM 2475

Query: 2 HGGLRGYL 9
+G RGYL
Sbjct: 144 YGNFRGYL 151


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 3 GGLRGYLR 10
GGL GYL+
Sbjct: 6479 GGLVGYLK 6486


Query: 2 HGGLRGYL 9
H GL+GYL
Sbjct: 670 HLGLQGYL 677


>sp|DCD_IGNH4|DCTP deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GHGGLRGYLR 10
GG++ YLR
Sbjct: 4 SDGGIKSYLR 13


>sp|FEN_AERPE|FLAP endonuclease 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 GGLRGY 8
GG+RGY
Sbjct: 243 GGVRGY 248


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GHGGLRGYL 9
G GG GY+
Sbjct: 274 GRGGYPGYM 282




5|Sequence|21|30|RGYLRVFFRT

>sp|LEUD1_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 RGYLRVFFR 9
+ Y R+FFR
Sbjct: 82 KSYARIFFR 90


>sp|Y1567_ARCFU|UNCHARACTERIZED protein AF_1567|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GYLRVFFR 9
GYLR+ F+
Sbjct: 136 GYLRILFK 143


>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GYLRVFFR 9
GYLR F+R
Sbjct: 382 GYLRFFWR 389


>sp|NEP1_STAMF|RIBOSOMAL RNA small subunit methyltransferase|Staphylothermus marinus

Query: 2 GYLRVFFRT 10
GYLR++ T
Sbjct: 85 GYLRIYIHT 93


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 YLRVFFRT 10
YLR FF T
Sbjct: 1327 YLRCFFST 1334


>sp|HIS3_METLZ|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GYLRVFFRT 10
GY FFRT
Sbjct: 96 GYASCFFRT 104


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 3 YLRVFFR 9
Y RVFFR
Sbjct: 217 YYRVFFR 223


>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YLRVFF 8
YLRVFF
Sbjct: 203 YLRVFF 208


>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GYLRVFF 8
G+L+VFF
Sbjct: 336 GFLKVFF 342




6|Sequence|26|35|VFFRTNDAKV

>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain

Query: 3 FRTNDAKV 10
FRTND KV
Sbjct: 73 FRTNDGKV 80


>sp|COFH1_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina mazei (strain ATCC

Query: 3 FRTNDAKV 10
FRT+D KV
Sbjct: 73 FRTDDGKV 80


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 FRTNDAKV 10
FRT+D KV
Sbjct: 320 FRTDDVKV 327


>sp|TYSY_METJA|PUTATIVE thymidylate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VFFRTNDA 8
V FR+NDA
Sbjct: 156 VIFRSNDA 163


>sp|TF2B6_HALSA|TRANSCRIPTION initiation factor IIB 6|Halobacterium salinarum (strain ATCC 700922

Query: 3 FRTNDAK 9
FRT DAK
Sbjct: 122 FRTRDAK 128


>sp|CHED_ARCFU|PROBABLE chemoreceptor glutamine deamidase CheD|Archaeoglobus fulgidus

Query: 1 VFFRTNDAKV 10
V+F TND ++
Sbjct: 136 VYFFTNDGRM 145


>sp|HCGF_METLZ|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanocorpusculum labreanum

Query: 3 FRTNDAK 9
FRT+DAK
Sbjct: 132 FRTSDAK 138


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VFFRTNDAKV 10
+ F NDAK+
Sbjct: 108 ILFMLNDAKI 117




7|Sequence|31|40|NDAKVGTLVG

>sp|CH60_METB6|CHAPERONIN GroEL|Methanoregula boonei (strain DSM 21154

Query: 1 NDAKVGTLV 9
ND ++GTL+
Sbjct: 154 NDEEIGTLI 162


>sp|SYE_NATPD|GLUTAMATE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NDAKVGTLVG 10
+DA+VG ++G
Sbjct: 26 SDAQVGAILG 35


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 KVGTLVG 10
K+GTLVG
Sbjct: 107 KLGTLVG 113


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NDAKVGTLVG 10
+DA+VG ++G
Sbjct: 28 SDAEVGAIMG 37


>sp|COFD_METPE|2-PHOSPHO-L-LACTATE transferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 NDAKVGTLVG 10
+DA VGT+V
Sbjct: 131 SDAPVGTMVA 140


>sp|SYE_HALSA|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NDAKVGTLVG 10
+DA+VG ++G
Sbjct: 26 SDAQVGAIMG 35


>sp|SYE_HALS3|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 NDAKVGTLVG 10
+DA+VG ++G
Sbjct: 26 SDAQVGAIMG 35


>sp|PANB_METS5|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 1 NDAKVGTLVG 10
ND K GT G
Sbjct: 244 NDVKTGTFPG 253


>sp|RL21_PYRAE|LARGE ribosomal subunit protein eL21|Pyrobaculum aerophilum (strain

Query: 3 AKVGTLVG 10
KVGT+VG
Sbjct: 60 GKVGTVVG 67


>sp|DHYS_METKA|PROBABLE deoxyhypusine synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 DAKVGTLVG 10
DA+V T+VG
Sbjct: 269 DAEVATIVG 277


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 1 NDAKVGTLVG 10
N+A +GT+ G
Sbjct: 150 NEATIGTVKG 159


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DAKVGTLVG 10
D K+G +VG
Sbjct: 140 DIKIGEIVG 148


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5 /

Query: 1 NDAKVGTLVG 10
N+A +GT+ G
Sbjct: 150 NEATIGTVKG 159


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 1 NDAKVGTLVG 10
N+A +GT+ G
Sbjct: 150 NEATIGTVKG 159




8|Sequence|36|45|GTLVGEDKYG

>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GTLVGEDKY 9
GTL E+KY
Sbjct: 239 GTLAAENKY 247


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 GTLVGEDKYG 10
GT+V DKYG
Sbjct: 151 GTVVVFDKYG 160


>sp|RNZ_METTH|RIBONUCLEASE Z|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GTLVGEDKY 9
GT+V ED Y
Sbjct: 121 GTVVEEDDY 129


>sp|PYRB_THEVO|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma volcanium

Query: 2 TLVGEDKYG 10
T+VG+ +YG
Sbjct: 158 TMVGDLRYG 166


>sp|PYRB_METST|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaera stadtmanae

Query: 3 LVGEDKYG 10
LVG+ KYG
Sbjct: 160 LVGDLKYG 167


>sp|PYRB_THEAC|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma acidophilum

Query: 2 TLVGEDKYG 10
T+VG+ +YG
Sbjct: 158 TMVGDLRYG 166


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 3 LVGEDKYG 10
LVG+ KYG
Sbjct: 157 LVGDLKYG 164


>sp|PYRB_METTH|ASPARTATE carbamoyltransferase catalytic subunit|Methanothermobacter

Query: 3 LVGEDKYG 10
LVG+ KYG
Sbjct: 157 LVGDLKYG 164


>sp|GCSH_HALLT|PROBABLE glycine cleavage system H|Halorubrum lacusprofundi (strain ATCC

Query: 3 LVGEDKYG 10
LV ED YG
Sbjct: 91 LVNEDPYG 98


>sp|FLPA_ARCFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Archaeoglobus fulgidus (strain

Query: 2 TLVGEDKYG 10
TLV + KYG
Sbjct: 14 TLVTKSKYG 22


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 GTLVGEDKY 9
GTL+ +D+Y
Sbjct: 277 GTLLPKDRY 285




9|Sequence|41|50|EDKYGNKYYE

>sp|RS4E_STAMF|SMALL ribosomal subunit protein eS4|Staphylothermus marinus (strain ATCC

Query: 1 EDKYGNKY 8
EDK+GNK+
Sbjct: 221 EDKHGNKF 228


>sp|FLAF_METVO|PUTATIVE flagella-related protein F|Methanococcus voltae

Query: 3 KYGNKYY 9
+YGNKYY
Sbjct: 123 EYGNKYY 129


>sp|RS4E_DESA1|SMALL ribosomal subunit protein eS4|Desulfurococcus amylolyticus (strain

Query: 1 EDKYGNKY 8
EDK GNK+
Sbjct: 221 EDKQGNKF 228


>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 EDKYGNKYY 9
ED YG KYY
Sbjct: 107 EDAYGIKYY 115


>sp|RL2_NANEQ|LARGE ribosomal subunit protein uL2|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 KYGNKYY 9
K GNKYY
Sbjct: 172 KAGNKYY 178


>sp|SURE_METST|5'-NUCLEOTIDASE SurE|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DKYGNKYY 9
D YG+ YY
Sbjct: 204 DPYGHPYY 211


>sp|PTAS_METTE|PHOSPHATE acetyltransferase|Methanosarcina thermophila

Query: 1 EDKYGNKYYE 10
+D+Y N +YE
Sbjct: 76 KDEYINAFYE 85


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 1 EDKYGNKYYE 10
ED YG K +E
Sbjct: 97 EDTYGRKRFE 106


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 1 EDKYGNKYYE 10
ED YG K +E
Sbjct: 97 EDTYGRKRFE 106


>sp|IF2A_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 EDKYGNKY 8
EDKYG+ Y
Sbjct: 130 EDKYGDAY 137


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 4 YGNKYY 9
YGN YY
Sbjct: 311 YGNVYY 316


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDKYGN 6
E+KYGN
Sbjct: 405 EEKYGN 410


>sp|RL5_THEAC|LARGE ribosomal subunit protein uL5|Thermoplasma acidophilum (strain

Query: 2 DKYGNKYY 9
DK+GN Y+
Sbjct: 92 DKHGNAYF 99


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EDKYGNKYYE 10
+DKY ++YY+
Sbjct: 450 KDKYVDQYYK 459


>sp|RRP4_SULTO|EXOSOME complex component Rrp4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KYGNKYY 9
K GNKYY
Sbjct: 35 KIGNKYY 41


>sp|RL5_THEVO|LARGE ribosomal subunit protein uL5|Thermoplasma volcanium (strain ATCC

Query: 2 DKYGNKYY 9
DK+GN Y+
Sbjct: 92 DKHGNAYF 99


>sp|Y949_METJA|UNCHARACTERIZED protein MJ0949|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DKYGNKYYE 10
++YG+ YY+
Sbjct: 89 ERYGDIYYK 97


>sp|GLYA_PYRNV|SERINE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM

Query: 1 EDKYGNKYYE 10
E GN+YY+
Sbjct: 52 EGTVGNRYYQ 61


>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM

Query: 1 EDKYGNKYYE 10
E GN+YY+
Sbjct: 52 EGTVGNRYYQ 61


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DKYGNKYYE 10
D YGNKY +
Sbjct: 44 DIYGNKYLD 52


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 DKYGNKYYE 10
D+Y NK YE
Sbjct: 590 DRYENKVYE 598


>sp|GLYA_PYRAE|SERINE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC

Query: 1 EDKYGNKYYE 10
E GN+YY+
Sbjct: 52 EGTVGNRYYQ 61


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 1 EDKYGNKYYE 10
+DKY K+Y+
Sbjct: 450 KDKYVEKFYK 459


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 KYGNKYYE 10
K+GN+Y++
Sbjct: 448 KFGNEYFQ 455


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 EDKYGNKYYE 10
E GN+YY+
Sbjct: 56 EGTIGNRYYQ 65


>sp|RL35A_AERPE|LARGE ribosomal subunit protein eL33|Aeropyrum pernix (strain ATCC

Query: 2 DKYGNKY 8
D+YGN Y
Sbjct: 47 DRYGNVY 53


>sp|PRNK_PYRAB|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PYRAB01840|Pyrococcus abyssi (strain GE5 /

Query: 3 KYGNKYY 9
K GNKY+
Sbjct: 255 KIGNKYF 261


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 1 EDKYGNKYYE 10
EDK G+ YY+
Sbjct: 319 EDKLGHIYYK 328


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EDKYGNKYYE 10
ED+ G KYY+
Sbjct: 322 EDRPGAKYYK 331


>sp|CSG_METVS|S-LAYER protein|Methanococcus vannielii (strain ATCC 35089

Query: 1 EDKYGN 6
EDKYG+
Sbjct: 227 EDKYGS 232


>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KYGNKY 8
KYGNKY
Sbjct: 383 KYGNKY 388




10|Sequence|46|55|NKYYEDNKQF

>sp|Y1141_METJA|UNCHARACTERIZED protein MJ1141|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKYYED 6
NKYYED
Sbjct: 84 NKYYED 89


>sp|Y959_METJA|UNCHARACTERIZED aminotransferase MJ0959|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KYYEDNKQ 9
KYYE+ KQ
Sbjct: 233 KYYEEKKQ 240


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 KYYEDNKQF 10
++Y+DN++F
Sbjct: 402 EFYDDNREF 410


>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 YYEDNKQF 10
+YE+NK F
Sbjct: 389 FYENNKTF 396


>sp|Y1880_METMJ|UNCHARACTERIZED solute-binding protein Memar_1880|Methanoculleus marisnigri (strain

Query: 3 YYEDNKQF 10
YYED++ F
Sbjct: 180 YYEDDQIF 187


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 NKYYEDN 7
NK+YED+
Sbjct: 586 NKFYEDH 592


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 3 YYEDNKQF 10
YYED K+
Sbjct: 527 YYEDGKEL 534


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 2 KYYED 6
KYYED
Sbjct: 263 KYYED 267


>sp|CIMA_METJA|(R)-CITRAMALATE synthase CimA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKYYEDNKQF 10
NK YE K+F
Sbjct: 340 NKIYERVKEF 349


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 NKYYE 5
NKYYE
Sbjct: 308 NKYYE 312


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NKYYEDNKQF 10
N+++E+NK++
Sbjct: 382 NEFFEENKEW 391


>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NKYYE 5
NKYYE
Sbjct: 307 NKYYE 311




11|Sequence|51|60|DNKQFFGRHR

>sp|PDXT_IGNH4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Ignicoccus hospitalis (strain

Query: 3 KQFFGRHR 10
+ FFGR R
Sbjct: 116 RNFFGRQR 123


>sp|PDXT_AERPE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Aeropyrum pernix (strain ATCC

Query: 3 KQFFGRHR 10
+ FFGR R
Sbjct: 116 RNFFGRQR 123


>sp|MTRF_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit F|Methanopyrus kandleri (strain AV19

Query: 1 DNKQFFGR 8
D+ QFFGR
Sbjct: 33 DSSQFFGR 40


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DNKQFFGRH 9
D QFFG++
Sbjct: 273 DASQFFGKY 281


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 DNKQFFGR 8
++K+FFGR
Sbjct: 810 NHKEFFGR 817


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 3 KQFFGR 8
K+FFGR
Sbjct: 376 KEFFGR 381


>sp|RS24_THEAC|SMALL ribosomal subunit protein eS24|Thermoplasma acidophilum (strain

Query: 1 DNKQFFGRH 9
+NKQ G+H
Sbjct: 55 NNKQLTGKH 63


>sp|RS24_THEVO|SMALL ribosomal subunit protein eS24|Thermoplasma volcanium (strain

Query: 2 NKQFFGRH 9
NKQ G+H
Sbjct: 57 NKQLTGKH 64




12|Sequence|56|65|FGRHRWVVYT

>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 4 HRWVVYT 10
HRWV+YT
Sbjct: 357 HRWVIYT 363


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain ATCC

Query: 4 HRWVVYT 10
HRWV+YT
Sbjct: 357 HRWVIYT 363


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 3 RHRWVV 8
RHRW V
Sbjct: 457 RHRWEV 462


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RHRWVV 8
RHRW V
Sbjct: 457 RHRWEV 462


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RHRWVV 8
RHRW V
Sbjct: 457 RHRWEV 462


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 RHRWVV 8
RHRW V
Sbjct: 457 RHRWEV 462


>sp|PYRG_THEGJ|CTP synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 RHRWVV 8
RHRW V
Sbjct: 457 RHRWEV 462


>sp|PYRG_THEKO|CTP synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RHRWVV 8
RHRW V
Sbjct: 457 RHRWEV 462


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FGRHRWVVYT 10
+ R+ W+++T
Sbjct: 490 YKRYNWIIFT 499


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GRHRWV 7
G HRW+
Sbjct: 215 GNHRWM 220


>sp|RL15_THEVO|LARGE ribosomal subunit protein uL15|Thermoplasma volcanium (strain

Query: 2 GRHRWV 7
G+H+W+
Sbjct: 36 GKHKWI 41


>sp|SERK_THEKO|ADP-DEPENDENT L-serine kinase SerK|Thermococcus kodakarensis (strain ATCC

Query: 2 GRHRW 6
G HRW
Sbjct: 70 GHHRW 74


>sp|SERK_STAMF|ATP-DEPENDENT L-serine kinase|Staphylothermus marinus (strain ATCC 43588

Query: 2 GRHRW 6
G HRW
Sbjct: 75 GHHRW 79


>sp|SERK_DESA1|ATP-DEPENDENT L-serine kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 GRHRW 6
G HRW
Sbjct: 76 GHHRW 80


>sp|SERK_DESM0|ATP-DEPENDENT L-serine kinase|Desulfurococcus mucosus (strain ATCC 35584

Query: 2 GRHRW 6
G HRW
Sbjct: 76 GHHRW 80


>sp|RL15_THEAC|LARGE ribosomal subunit protein uL15|Thermoplasma acidophilum (strain

Query: 2 GRHRWV 7
G+H+W+
Sbjct: 36 GKHKWI 41


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGRHRW 6
FG H W
Sbjct: 241 FGEHHW 246


>sp|Y2147_ARCFU|UNCHARACTERIZED protein AF_2147|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FGRHRWVVYT 10
FG W+++T
Sbjct: 38 FGNPLWILWT 47




13|Sequence|61|70|WVVYTTEMNG

>sp|CARA_SACS2|CARBAMOYL phosphate synthase small chain|Saccharolobus solfataricus (strain

Query: 2 VVYTTEMNG 10
VV+TT MNG
Sbjct: 33 VVFTTSMNG 41


>sp|CARA_SULTO|CARBAMOYL phosphate synthase small chain|Sulfurisphaera tokodaii (strain

Query: 2 VVYTTEMNG 10
VV+TT MNG
Sbjct: 36 VVFTTSMNG 44


>sp|CARA_METS5|CARBAMOYL phosphate synthase small chain|Metallosphaera sedula (strain ATCC

Query: 2 VVYTTEMNG 10
VV+TT MNG
Sbjct: 35 VVFTTAMNG 43


>sp|CARA_SULAC|CARBAMOYL phosphate synthase small chain|Sulfolobus acidocaldarius (strain

Query: 2 VVYTTEMNG 10
+V+TT MNG
Sbjct: 35 IVFTTSMNG 43


>sp|Y012_METJA|TNPB-LIKE protein MJ0012|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VVYTTEMNG 10
+VYT ++NG
Sbjct: 191 MVYTVDLNG 199


>sp|PHAE_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloferax mediterranei (strain ATCC 33500

Query: 1 WVVYTTEMN 9
W +Y EMN
Sbjct: 9 WTMYAAEMN 17


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 1 WVVYTTEMN 9
WV+YT N
Sbjct: 359 WVIYTQGSN 367


>sp|DTDA_HALMA|D-AMINOACYL-TRNA deacylase|Haloarcula marismortui (strain ATCC 43049

Query: 2 VVYTTEMNG 10
+ Y TE NG
Sbjct: 349 IAYATEQNG 357


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 WVVYTTEMNG 10
W + +E+NG
Sbjct: 191 WFITLSELNG 200


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain ATCC

Query: 1 WVVYTTEMN 9
WV+YT N
Sbjct: 359 WVIYTQGSN 367


>sp|FSX1_UNCAX|FUSEXIN 1|Uncultured archaeon

Query: 1 WVVYTTEMNG 10
W +YT + NG
Sbjct: 472 WEIYTCQDNG 481


>sp|RL39_HALLT|LARGE ribosomal subunit protein eL39|Halorubrum lacusprofundi (strain

Query: 1 WVVYTTEMN 9
WV+ T+MN
Sbjct: 25 WVMMKTDMN 33


>sp|RS15_THEKO|SMALL ribosomal subunit protein uS15|Thermococcus kodakarensis (strain

Query: 1 WVVYTTE 7
WV YT E
Sbjct: 25 WVEYTAE 31


>sp|RS15_PYRFU|SMALL ribosomal subunit protein uS15|Pyrococcus furiosus (strain ATCC

Query: 1 WVVYTTE 7
WV YT E
Sbjct: 25 WVEYTVE 31


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WVVYTTEMN 9
W++Y T N
Sbjct: 509 WIIYRTSHN 517




14|Sequence|66|75|TEMNGKNTFW

>sp|GGGPS_METMP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 MNGKNTFW 10
MN KNT+W
Sbjct: 97 MNSKNTYW 104


>sp|GGGPS_METM7|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 1 TEMNGKNTFW 10
T MN KNT+W
Sbjct: 95 TLMNSKNTYW 104


>sp|GGGPS_METM5|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 3 MNGKNTFW 10
MN KNT+W
Sbjct: 97 MNSKNTYW 104


>sp|GGGPS_METM6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 3 MNGKNTFW 10
MN KNT+W
Sbjct: 97 MNSKNTYW 104


>sp|GGGPS_METVS|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 MNGKNTFW 10
MN KNT+W
Sbjct: 97 MNSKNTYW 104


>sp|GGGPS_METJA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MNGKNTFW 10
MN NT+W
Sbjct: 97 MNSANTYW 104


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 5 GKNTFW 10
GK TFW
Sbjct: 655 GKETFW 660


>sp|GCSH2_SULAC|PROBABLE glycine cleavage system H|Sulfolobus acidocaldarius (strain ATCC

Query: 3 MNGKNTFW 10
++GKNT W
Sbjct: 17 IDGKNTVW 24


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EMNGKNTFW 10
E NGK +W
Sbjct: 252 EFNGKEEYW 260


>sp|Y833_METJA|UNCHARACTERIZED protein MJ0833|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TEMNGKNTFW 10
T NGK FW
Sbjct: 89 TIFNGKEGFW 98


>sp|PYRK_ARCFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Archaeoglobus fulgidus

Query: 2 EMNGKNTFW 10
E KN FW
Sbjct: 122 ERTAKNLFW 130


>sp|GGGPS_META3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 MNGKNTFW 10
MN NT+W
Sbjct: 95 MNSNNTYW 102


>sp|GCSH2_SACS2|PROBABLE glycine cleavage system H|Saccharolobus solfataricus (strain ATCC

Query: 3 MNGKNTFW 10
+ GKNT W
Sbjct: 17 IEGKNTVW 24


>sp|NADE_PICTO|NH(3)-DEPENDENT NAD(+) synthetase|Picrophilus torridus (strain ATCC 700027

Query: 2 EMNGKN 7
E+NGKN
Sbjct: 19 ELNGKN 24


>sp|GCSH2_SULTO|PROBABLE glycine cleavage system H|Sulfurisphaera tokodaii (strain DSM

Query: 3 MNGKNTFW 10
+ GKNT W
Sbjct: 17 IEGKNTVW 24


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 EMNGKNTFW 10
E NG+ +W
Sbjct: 252 EFNGREEYW 260




15|Sequence|71|80|KNTFWDVDGS

>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 4 FWDVDG 9
FWD DG
Sbjct: 107 FWDSDG 112


>sp|AROA_THEAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 4 FWDVDGS 10
F+DVDGS
Sbjct: 138 FYDVDGS 144


>sp|PELO_ARCFU|PROTEIN pelota homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 WDVDG 9
WDVDG
Sbjct: 299 WDVDG 303


>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC

Query: 4 FWDVDG 9
+WD+DG
Sbjct: 45 YWDLDG 50


>sp|ARGD_METTH|ACETYLORNITHINE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 3 TFWDVDGS 10
T WD++G+
Sbjct: 32 TVWDIEGN 39


>sp|GGGPS_METMP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KNTFWDV 7
KNT+W++
Sbjct: 100 KNTYWNM 106


>sp|GGGPS_METM7|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 1 KNTFWDV 7
KNT+W++
Sbjct: 100 KNTYWNM 106


>sp|GGGPS_METM6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 1 KNTFWDV 7
KNT+W++
Sbjct: 100 KNTYWNM 106


>sp|GGGPS_METM5|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 1 KNTFWDV 7
KNT+W++
Sbjct: 100 KNTYWNM 106


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 NTFWDVD 8
NT++DVD
Sbjct: 359 NTYYDVD 365


>sp|Y452_PYRAB|UNCHARACTERIZED lipoprotein PYRAB04520|Pyrococcus abyssi (strain GE5 /

Query: 4 FWDVDG 9
+WD+DG
Sbjct: 312 YWDLDG 317


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 NTFWDVD 8
NT++DVD
Sbjct: 359 NTYYDVD 365


>sp|GGGPS_METVS|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KNTFWDV 7
KNT+W++
Sbjct: 100 KNTYWNM 106


>sp|Y1714_PYRHO|UNCHARACTERIZED lipoprotein PH1714|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 FWDVDG 9
+WD+DG
Sbjct: 313 YWDLDG 318


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 KNTFWDVD 8
+N+FW+ D
Sbjct: 244 QNSFWNFD 251


>sp|MTNA_METTH|PUTATIVE methylthioribose-1-phosphate isomerase|Methanothermobacter

Query: 2 NTFWDVD 8
N FW VD
Sbjct: 85 NLFWAVD 91


>sp|MTNA_METST|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosphaera stadtmanae

Query: 2 NTFWDVD 8
N FW VD
Sbjct: 84 NLFWAVD 90


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KNTFWDVD 8
++T WD+D
Sbjct: 258 ESTLWDMD 265


>sp|COFD_NATPD|2-PHOSPHO-L-LACTATE transferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KNTFWDVDG 9
+ T+W +DG
Sbjct: 61 RETWWGIDG 69


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 KNTFWDVDG 9
K T WDV+G
Sbjct: 5 KVTPWDVEG 13


>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KNTFWDVDG 9
K T WDV+G
Sbjct: 5 KVTPWDVEG 13


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 KNTFWDVDG 9
+NTF VDG
Sbjct: 257 ENTFGAVDG 265


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NTFWDV 7
NTFW +
Sbjct: 20 NTFWSI 25


>sp|CARA_METM7|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C7

Query: 1 KNTFWDV 7
KNT W V
Sbjct: 327 KNTVWSV 333


>sp|CARA_METMP|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain

Query: 1 KNTFWDV 7
KNT W V
Sbjct: 327 KNTVWSV 333


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TFWDVDG 9
T WD++G
Sbjct: 110 TDWDIEG 116


>sp|CARA_METM6|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C6

Query: 1 KNTFWDV 7
KNT W V
Sbjct: 327 KNTVWSV 333


>sp|CARA_METM5|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C5

Query: 1 KNTFWDV 7
KNT W V
Sbjct: 327 KNTVWSV 333




16|Sequence|76|85|DVDGSMVPPE

>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VDGSMVPP 9
VDGS++PP
Sbjct: 174 VDGSVLPP 181


>sp|ENDA_PYRNV|TRNA-SPLICING endonuclease|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 DGSMVPPE 10
DG+ +PPE
Sbjct: 70 DGAEIPPE 77


>sp|Y008_METJA|UNCHARACTERIZED protein MJ0008|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVDGSMVPPE 10
+VDG +PP+
Sbjct: 166 EVDGKHLPPK 175


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DVDGSMVPPE 10
D++G + PPE
Sbjct: 44 DIEGRIYPPE 53


>sp|Y1613_METJA|UNCHARACTERIZED protein MJ1613|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VDGSMVPPE 10
VDG +VP E
Sbjct: 146 VDGKIVPKE 154


>sp|RS13_SULTO|SMALL ribosomal subunit protein uS13|Sulfurisphaera tokodaii (strain

Query: 1 DVDGSMVPP 9
DVDG+M P
Sbjct: 17 DVDGTMKVP 25


>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 GSMVPPE 10
G MVPPE
Sbjct: 166 GEMVPPE 172


>sp|RS13_SACS2|SMALL ribosomal subunit protein uS13|Saccharolobus solfataricus (strain

Query: 1 DVDGSMVPP 9
DVDG+M P
Sbjct: 15 DVDGTMKLP 23


>sp|PDXT_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 DVDGSMVP 8
D+DG ++P
Sbjct: 43 DIDGVIIP 50


>sp|PDXT_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 DVDGSMVP 8
D+DG ++P
Sbjct: 43 DIDGVIIP 50


>sp|PDXT_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 DVDGSMVP 8
D+DG ++P
Sbjct: 43 DIDGVIIP 50


>sp|OTSBH_THEAC|TREHALOSE-6-PHOSPHATE phosphatase-related protein|Thermoplasma acidophilum (strain ATCC

Query: 1 DVDGSMVP 8
D DG++VP
Sbjct: 5 DYDGTLVP 12


>sp|PDXT_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 DVDGSMVP 8
D+DG ++P
Sbjct: 43 DIDGVIIP 50


>sp|PDXT_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 DVDGSMVP 8
D+DG ++P
Sbjct: 43 DIDGVIIP 50


>sp|PDXT_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 DVDGSMVP 8
D+DG ++P
Sbjct: 43 DIDGVIIP 50


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVDGSMVP 8
DVDG +VP
Sbjct: 340 DVDGILVP 347


>sp|RS13_SULAC|SMALL ribosomal subunit protein uS13|Sulfolobus acidocaldarius (strain

Query: 1 DVDGSMVPP 9
DVDG+M P
Sbjct: 16 DVDGTMKLP 24


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 DVDGSMVP 8
D DG++VP
Sbjct: 503 DYDGTLVP 510


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DVDGSMVP 8
DVDG ++P
Sbjct: 339 DVDGILIP 346


>sp|Y453_METAC|UNCHARACTERIZED glycosyltransferase MA_0453|Methanosarcina acetivorans (strain ATCC

Query: 2 VDGSMVP 8
VDG MVP
Sbjct: 157 VDGIMVP 163


>sp|PDXT_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Metallosphaera sedula (strain

Query: 1 DVDGSMVP 8
DVDG ++P
Sbjct: 41 DVDGIIIP 48


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 DGSMVPPE 10
DGS++P E
Sbjct: 223 DGSLIPIE 230


>sp|RNZ_METMA|RIBONUCLEASE Z|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DVDGSMVPPE 10
+V+G +V PE
Sbjct: 182 EVNGKLVKPE 191


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DVDGSMVP 8
DVDG ++P
Sbjct: 340 DVDGILIP 347




17|Sequence|81|90|MVPPEWHRWL

>sp|PTH_AERPE|PEPTIDYL-TRNA hydrolase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PEWHRWL 10
PEW RWL
Sbjct: 44 PEWRRWL 50


>sp|GGGPS_METAR|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 MVPPEWHRW 9
M P +W +W
Sbjct: 1 MAPIDWKKW 9


>sp|NADK_THEVO|NAD kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MVPPEWHR 8
++PP+W +
Sbjct: 24 LIPPDWEK 31


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VPPEWH 7
V PEWH
Sbjct: 554 VTPEWH 559


>sp|ENGB_METJA|PROBABLE GTP-binding protein EngB|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PEWHRW 9
P WH+W
Sbjct: 179 PPWHQW 184


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 VPPEWHRWL 10
VPPEW +L
Sbjct: 78 VPPEWKEYL 86


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 1 MVPPEWH 7
++PPEW+
Sbjct: 287 VIPPEWY 293


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 MVPPEWHRWL 10
M+ PE HR+
Sbjct: 400 MIDPESHRYF 409


>sp|RS19_SULTO|SMALL ribosomal subunit protein uS19|Sulfurisphaera tokodaii (strain

Query: 2 VPPEWHRW 9
+PPEW ++
Sbjct: 5 IPPEWKKF 12


>sp|RS19_STAMF|SMALL ribosomal subunit protein uS19|Staphylothermus marinus (strain

Query: 2 VPPEWHRW 9
+PPEW ++
Sbjct: 7 IPPEWKKF 14


>sp|RS19_SULAC|SMALL ribosomal subunit protein uS19|Sulfolobus acidocaldarius (strain

Query: 2 VPPEWHRW 9
+PPEW ++
Sbjct: 5 IPPEWKKF 12


>sp|LEU1_METKA|PROBABLE 2-isopropylmalate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 MVPPEWHR 8
M PPE +R
Sbjct: 171 MTPPEMYR 178


>sp|Y1986_ARCFU|UNCHARACTERIZED protein AF_1986|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 EWHRW 9
EWHR+
Sbjct: 12 EWHRY 16


>sp|ENGB_METMP|PROBABLE GTP-binding protein EngB|Methanococcus maripaludis (strain DSM

Query: 4 PEWHRWL 10
P W +WL
Sbjct: 191 PPWRQWL 197


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 1 MVPPEW 6
+VPP+W
Sbjct: 340 VVPPKW 345


>sp|CBIM_ARCFU|PUTATIVE cobalt transport protein CbiM|Archaeoglobus fulgidus (strain ATCC

Query: 2 VPPEW 6
+PPEW
Sbjct: 8 LPPEW 12


>sp|FLUC_THEKO|FLUORIDE-SPECIFIC ion channel FluC|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VPPEW 6
VPP+W
Sbjct: 61 VPPDW 65


>sp|PGK_METKA|PHOSPHOGLYCERATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 4 PEWH 7
PEWH
Sbjct: 128 PEWH 131


>sp|CETZ5_HALVD|TUBULIN-LIKE protein CetZ5|Haloferax volcanii (strain ATCC 29605

Query: 3 PPEW 6
PPEW
Sbjct: 300 PPEW 303


>sp|MTRD_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina acetivorans (strain

Query: 4 PEWHRW 9
P+W +W
Sbjct: 216 PKWKKW 221


>sp|HDRC_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 VPPEWHRW 9
VPP HR+
Sbjct: 154 VPPTTHRY 161


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 PEWHR 8
PEW+R
Sbjct: 277 PEWYR 281


>sp|RS15_NATPD|SMALL ribosomal subunit protein uS15|Natronomonas pharaonis (strain

Query: 3 PPEW 6
PPEW
Sbjct: 22 PPEW 25


>sp|RS15_HALMA|SMALL ribosomal subunit protein uS15|Haloarcula marismortui (strain

Query: 3 PPEW 6
PPEW
Sbjct: 22 PPEW 25


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VPPEWHR 8
V PEW R
Sbjct: 876 VDPEWRR 882


>sp|RS19E_ARCFU|SMALL ribosomal subunit protein eS19|Archaeoglobus fulgidus (strain

Query: 1 MVPPEWHRWL 10
+ PPEW +++
Sbjct: 24 VAPPEWAKYV 33


>sp|RS15_HALSA|SMALL ribosomal subunit protein uS15|Halobacterium salinarum (strain

Query: 3 PPEW 6
PPEW
Sbjct: 22 PPEW 25


>sp|ENGB_ARCFU|PROBABLE GTP-binding protein EngB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MVPPEWHRW 9
M PP W +W
Sbjct: 152 MQPP-WEKW 159


>sp|SYY_SULTO|TYROSINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 6 WHRWL 10
WH W+
Sbjct: 78 WHAWI 82


>sp|SYY_SACS2|TYROSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 6 WHRWL 10
WH W+
Sbjct: 78 WHAWI 82


>sp|SYY_SACI7|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 6 WHRWL 10
WH W+
Sbjct: 73 WHAWI 77


>sp|SYY_SACI6|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 6 WHRWL 10
WH W+
Sbjct: 73 WHAWI 77


>sp|SYY_SACI4|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 6 WHRWL 10
WH W+
Sbjct: 73 WHAWI 77


>sp|SYY_SACI3|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 6 WHRWL 10
WH W+
Sbjct: 73 WHAWI 77


>sp|SYY_SACI2|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 6 WHRWL 10
WH W+
Sbjct: 73 WHAWI 77


>sp|SYY_SACI1|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 6 WHRWL 10
WH W+
Sbjct: 73 WHAWI 77


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PPEWHRWL 10
PPE WL
Sbjct: 55 PPEGRDWL 62


>sp|RS19_SACS2|SMALL ribosomal subunit protein uS19|Saccharolobus solfataricus (strain

Query: 2 VPPEWHRW 9
+PPEW +
Sbjct: 5 IPPEWKNF 12


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 5 EWHRWL 10
+WH W+
Sbjct: 74 DWHSWI 79


>sp|RS19_HYPBU|SMALL ribosomal subunit protein uS19|Hyperthermus butylicus (strain DSM

Query: 2 VPPEWHRW 9
+PPEW ++
Sbjct: 8 LPPEWKKF 15


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VPPEWHRWL 10
VPPEW L
Sbjct: 78 VPPEWKEHL 86


>sp|PYRI_AERPE|ASPARTATE carbamoyltransferase regulatory chain|Aeropyrum pernix (strain

Query: 1 MVPPEWHRW 9
++PP +RW
Sbjct: 34 LLPPRGYRW 42


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 EWHRWL 10
+WH W+
Sbjct: 74 DWHSWI 79


>sp|RS19E_SACS2|SMALL ribosomal subunit protein eS19|Saccharolobus solfataricus (strain

Query: 3 PPEW 6
PPEW
Sbjct: 33 PPEW 36


>sp|NADA_THEGJ|QUINOLINATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 PEWHRWL 10
PEW+ W+
Sbjct: 224 PEWNEWV 230


>sp|RS15_METMA|SMALL ribosomal subunit protein uS15|Methanosarcina mazei (strain ATCC

Query: 3 PPEW 6
PPEW
Sbjct: 22 PPEW 25


>sp|RS15_METAC|SMALL ribosomal subunit protein uS15|Methanosarcina acetivorans (strain

Query: 3 PPEW 6
PPEW
Sbjct: 22 PPEW 25




18|Sequence|86|95|WHRWLHSMTD

>sp|RL15_META3|LARGE ribosomal subunit protein uL15|Methanococcus aeolicus (strain

Query: 2 HRWLHSM 8
HRW+H++
Sbjct: 42 HRWIHTV 48


>sp|PTH_AERPE|PEPTIDYL-TRNA hydrolase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WHRWL 5
W RWL
Sbjct: 46 WRRWL 50


>sp|SYY_SULTO|TYROSINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WHRWLH 6
WH W++
Sbjct: 78 WHAWIN 83


>sp|SYY_SACS2|TYROSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WHRWLH 6
WH W++
Sbjct: 78 WHAWIN 83


>sp|SYY_SACI7|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 WHRWLH 6
WH W++
Sbjct: 73 WHAWIN 78


>sp|SYY_SACI6|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 WHRWLH 6
WH W++
Sbjct: 73 WHAWIN 78


>sp|SYY_SACI4|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 WHRWLH 6
WH W++
Sbjct: 73 WHAWIN 78


>sp|SYY_SACI3|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 WHRWLH 6
WH W++
Sbjct: 73 WHAWIN 78


>sp|SYY_SACI2|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 WHRWLH 6
WH W++
Sbjct: 73 WHAWIN 78


>sp|SYY_SACI1|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 WHRWLH 6
WH W++
Sbjct: 73 WHAWIN 78


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 WHRWLH 6
WH W++
Sbjct: 75 WHSWIN 80


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 1 WHRWLH 6
W +W+H
Sbjct: 300 WEKWMH 305


>sp|METK_METST|S-ADENOSYLMETHIONINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HRWLHSMTD 10
++WL ++TD
Sbjct: 386 NKWLENITD 394


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WHRWLH 6
WH W++
Sbjct: 75 WHSWIN 80


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WHRWLH 6
WH W++
Sbjct: 75 WHSWIN 80


>sp|NIKR_METMP|PUTATIVE nickel-responsive regulator|Methanococcus maripaludis (strain DSM

Query: 2 HRWLHSM 8
H+W+HS+
Sbjct: 46 HKWIHSL 52


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WHRWLH 6
WH W++
Sbjct: 75 WHSWIN 80


>sp|NIKR_METM5|PUTATIVE nickel-responsive regulator|Methanococcus maripaludis (strain C5

Query: 2 HRWLHSM 8
H+W+HS+
Sbjct: 46 HKWIHSL 52


>sp|NIKR_METM6|PUTATIVE nickel-responsive regulator|Methanococcus maripaludis (strain C6

Query: 2 HRWLHSM 8
H+W+HS+
Sbjct: 46 HKWIHSL 52


>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 WHRWLH 6
WH W++
Sbjct: 75 WHSWIN 80


>sp|NIKR_METVS|PUTATIVE nickel-responsive regulator|Methanococcus vannielii (strain ATCC

Query: 2 HRWLHSM 8
H+W+HS+
Sbjct: 46 HKWIHSL 52


>sp|NIKR_METM7|PUTATIVE nickel-responsive regulator|Methanococcus maripaludis (strain C7

Query: 2 HRWLHSM 8
H+W+HS+
Sbjct: 46 HKWIHSL 52


>sp|NIKR_META3|PUTATIVE nickel-responsive regulator|Methanococcus aeolicus (strain ATCC

Query: 2 HRWLHSM 8
H+W+HS+
Sbjct: 46 HKWIHSL 52


>sp|ENGB_ARCFU|PROBABLE GTP-binding protein EngB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WHRWLH 6
W +W H
Sbjct: 156 WEKWRH 161


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 WHRWLH 6
WH W++
Sbjct: 75 WHSWIN 80


>sp|CAS4_AERPE|CRISPR-ASSOCIATED exonuclease Cas4|Aeropyrum pernix (strain ATCC 700893

Query: 2 HRWLHS 7
+RWLH+
Sbjct: 99 NRWLHT 104


>sp|FWDE_METJA|FERREDOXIN-TYPE protein FwdE|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RWLHSMTD 10
+++HS+TD
Sbjct: 68 KFIHSLTD 75


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WHRWLH 6
WH W++
Sbjct: 75 WHSWIN 80


>sp|NIKR_METJA|PUTATIVE nickel-responsive regulator|Methanocaldococcus jannaschii (strain

Query: 2 HRWLHSM 8
H+W+HS+
Sbjct: 46 HKWIHSL 52


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 1 WHRWL 5
WH WL
Sbjct: 207 WHSWL 211


>sp|GGGPS_ARCFU|GERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WHRWLH 6
W +W H
Sbjct: 3 WRKWRH 8


>sp|HTPX_METJA|PROTEASE HtpX homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WLHSMTD 10
WLH M +
Sbjct: 67 WLHQMVE 73


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 1 WHRWLH 6
WH W+H
Sbjct: 33 WHVWVH 38


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HRWLHS 7
H WLH+
Sbjct: 252 HYWLHT 257


>sp|SYY2_PYRAE|TYROSINE--TRNA ligase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WHRWLH 6
WH W++
Sbjct: 63 WHAWIN 68


>sp|DHYS_METKA|PROBABLE deoxyhypusine synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 HRWLHS 7
H W+HS
Sbjct: 181 HVWIHS 186


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 1 WHRWLH 6
W++W+H
Sbjct: 33 WYKWVH 38




19|Sequence|91|100|HSMTDDPPTT

>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 2 SMTDDPPTT 10
+++DDPPT+
Sbjct: 399 ALSDDPPTS 407


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HSMTDDPP 8
HS TD PP
Sbjct: 184 HSSTDKPP 191


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MTDDPPT 9
+ DDPPT
Sbjct: 500 LVDDPPT 506


>sp|GUAAB_METTH|GMP synthase [glutamine-hydrolyzing] subunit B|Methanothermobacter

Query: 2 SMTDDPPTT 10
S++D PP+T
Sbjct: 296 SVSDKPPST 304


>sp|OTC_METMA|ORNITHINE carbamoyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SMTDDPPT 9
S+TDDP T
Sbjct: 203 SITDDPKT 210


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 SMTDDPPTT 10
++ DDPP T
Sbjct: 408 ALADDPPKT 416


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 SMTDDPPTT 10
++ DDPP T
Sbjct: 408 ALADDPPKT 416


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 MTDDPPT 9
MTDDP T
Sbjct: 95 MTDDPTT 101


>sp|GUAAB_METVS|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus vannielii

Query: 3 MTDDPPTT 10
+TD PP T
Sbjct: 299 VTDKPPAT 306


>sp|GUAAB_METMP|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 3 MTDDPPTT 10
+TD PP T
Sbjct: 299 VTDKPPAT 306


>sp|GUAAB_METJA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocaldococcus

Query: 3 MTDDPPTT 10
+TD PP T
Sbjct: 299 ITDKPPAT 306


>sp|GUAAB_METM7|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 3 MTDDPPTT 10
+TD PP T
Sbjct: 299 VTDKPPAT 306


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 3 MTDDPPTT 10
++ DPPTT
Sbjct: 360 VSQDPPTT 367


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HSMTDDPPT 9
+ +TD PPT
Sbjct: 252 YKLTDVPPT 260


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 MTDDPPT 9
+TDDP T
Sbjct: 266 LTDDPKT 272


>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 MTDDPPT 9
+TDDP T
Sbjct: 266 LTDDPKT 272


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HSMTDD 6
H MTDD
Sbjct: 131 HGMTDD 136




20|Sequence|96|105|DPPTTKPLTA

>sp|RNP4_METB6|RIBONUCLEASE P protein component 4|Methanoregula boonei (strain DSM 21154

Query: 2 PPTTKPL 8
PP+ KPL
Sbjct: 7 PPSVKPL 13


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 DPPTTKPL 8
D P TKPL
Sbjct: 365 DNPHTKPL 372


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 DPPTTKPL 8
DP T KPL
Sbjct: 709 DPKTGKPL 716


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DPPTTKPLT 9
+PP KPL+
Sbjct: 585 EPPEPKPLS 593


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DPPTTKPL 8
DP T KPL
Sbjct: 269 DPKTGKPL 276


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DPPTTKPL 8
DP T KPL
Sbjct: 143 DPRTKKPL 150


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DPPTTKPL 8
DP T KPL
Sbjct: 143 DPRTKKPL 150


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DPPTTKPL 8
DP T KPL
Sbjct: 656 DPKTGKPL 663


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DPPTTKPL 8
D PT KPL
Sbjct: 218 DKPTEKPL 225


>sp|DAPH_METKA|2,3,4,5-TETRAHYDROPYRIDINE-2,6-DICARBOXYLATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 DPPTTKPL 8
+PP+ KP+
Sbjct: 168 EPPSAKPV 175


>sp|IF6_METAC|TRANSLATION initiation factor 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PPTTKP 7
PP TKP
Sbjct: 27 PPLTKP 32


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DPPTTKPL 8
DP T KPL
Sbjct: 705 DPNTGKPL 712


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DPPTTKPL 8
DP T KPL
Sbjct: 280 DPRTGKPL 287




21|Sequence|101|110|KPLTARKFIW

>sp|DHYS_THEON|PROBABLE deoxyhypusine synthase|Thermococcus onnurineus (strain NA1)

Query: 1 KPLTARKFIW 10
KPLTA +FI+
Sbjct: 170 KPLTASEFIY 179


>sp|DHYS_THEGJ|PROBABLE deoxyhypusine synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KPLTARKFIW 10
KPLTA +FI+
Sbjct: 170 KPLTASEFIY 179


>sp|DHYS_THEKO|PROBABLE deoxyhypusine synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 KPLTARKFIW 10
KPLTA +FI+
Sbjct: 170 KPLTASEFIY 179


>sp|DHYS_PYRFU|PROBABLE deoxyhypusine synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KPLTARKFIW 10
+PLTA +FI+
Sbjct: 170 RPLTASEFIY 179


>sp|MTRE_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina acetivorans (strain

Query: 2 PLTARKFIW 10
PLT FIW
Sbjct: 162 PLTMLAFIW 170


>sp|MTRE_METBU|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcoides burtonii (strain DSM

Query: 2 PLTARKFIW 10
PLT FIW
Sbjct: 161 PLTLLAFIW 169


>sp|SECY_SULAC|PROTEIN translocase subunit SecY|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KPLTARKFIW 10
KP RK +W
Sbjct: 23 KPTLTRKLLW 32


>sp|MTRE_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 2 PLTARKFIW 10
PLT FIW
Sbjct: 162 PLTMLAFIW 170


>sp|Y139_DESA1|UPF0147 protein DKAM_0139|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 PLTARKFIW 10
PL+AR +W
Sbjct: 72 PLSARTKVW 80


>sp|MTRE_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina barkeri (strain Fusaro

Query: 2 PLTARKFIW 10
PLT FIW
Sbjct: 162 PLTMLAFIW 170


>sp|AROE_SULTO|SHIKIMATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LTARKFIW 10
L ARK IW
Sbjct: 253 LYARKLIW 260


>sp|FLAH_SULAC|ARCHAEAL flagellar ATP-binding protein FlaH|Sulfolobus acidocaldarius

Query: 2 PLTARKFIW 10
PL +KF W
Sbjct: 87 PLNTKKFNW 95


>sp|DHYS_PYRAB|PROBABLE deoxyhypusine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 KPLTARKFIW 10
+PLTA +FI+
Sbjct: 169 RPLTASEFIY 178


>sp|DHYS_PYRHO|PROBABLE deoxyhypusine synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KPLTARKFIW 10
+PLTA +FI+
Sbjct: 169 RPLTASEFIY 178


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PLTARKF 8
PLTA+KF
Sbjct: 897 PLTAKKF 903


>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 2 PLTARKFI 9
PL RKF+
Sbjct: 44 PLVGRKFV 51


>sp|AROE_SACI7|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.G.57.14

Query: 3 LTARKFIW 10
L ARK +W
Sbjct: 262 LYARKLVW 269


>sp|AROE_SACI6|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.4 /

Query: 3 LTARKFIW 10
L ARK +W
Sbjct: 262 LYARKLVW 269


>sp|AROE_SACI4|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.14.25 /

Query: 3 LTARKFIW 10
L ARK +W
Sbjct: 262 LYARKLVW 269


>sp|AROE_SACI3|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.27)

Query: 3 LTARKFIW 10
L ARK +W
Sbjct: 262 LYARKLVW 269


>sp|AROE_SACI2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 LTARKFIW 10
L ARK +W
Sbjct: 262 LYARKLVW 269


>sp|AROE_SACI1|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.N.15.51

Query: 3 LTARKFIW 10
L ARK +W
Sbjct: 262 LYARKLVW 269


>sp|Y2225_ARCFU|UNCHARACTERIZED protein AF_2225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PLTARKFI 9
PLTA KF+
Sbjct: 31 PLTAVKFL 38


>sp|RS12_METLZ|SMALL ribosomal subunit protein uS12|Methanocorpusculum labreanum

Query: 4 TARKFIW 10
TA+KF W
Sbjct: 14 TAKKFRW 20




22|Sequence|106|115|RKFIWTNHKF

>sp|Y1326_METJA|UNCHARACTERIZED GTP-binding protein MJ1326|Methanocaldococcus jannaschii (strain

Query: 1 RKFIWTNHKF 10
R FI+ NHKF
Sbjct: 9 RIFIFRNHKF 18


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 4 IWTNHKF 10
IW NH+F
Sbjct: 519 IWKNHEF 525


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 RKFIWT 6
R+FIWT
Sbjct: 169 RRFIWT 174


>sp|RS12_ARCFU|SMALL ribosomal subunit protein uS12|Archaeoglobus fulgidus (strain

Query: 1 RKFIWTNHKF 10
+KF W++ +F
Sbjct: 16 KKFRWSDRRF 25


>sp|LEUC_NATPD|3-ISOPROPYLMALATE dehydratase large subunit|Natronomonas pharaonis (strain ATCC

Query: 4 IWTNHK 9
+W NHK
Sbjct: 10 VWENHK 15


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KFIWTNHKF 10
+F+W+ HK
Sbjct: 569 EFLWSVHKL 577


>sp|RIBB_METAC|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 IWTNHK 9
IW NH+
Sbjct: 118 IWVNHR 123


>sp|Y1307_METJA|UNCHARACTERIZED protein MJ1307|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IWTNHKF 10
+W +HKF
Sbjct: 165 LWFDHKF 171


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 4 IWTNHK 9
IWTN K
Sbjct: 262 IWTNEK 267


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 4 IWTNHK 9
IWTN K
Sbjct: 266 IWTNEK 271


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 4 IWTNHK 9
IWTN K
Sbjct: 265 IWTNEK 270


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC

Query: 2 KFIWT 6
KF+WT
Sbjct: 29 KFVWT 33


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 1 RKFIW 5
RKF+W
Sbjct: 634 RKFVW 638


>sp|GUAAA_METTH|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothermobacter

Query: 1 RKFIWTNHK 9
R +W +HK
Sbjct: 119 RMSVWASHK 127


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 IWTNHKF 10
+W NHK
Sbjct: 505 VWLNHKL 511


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKFIWTNHKF 10
RK+I+ +KF
Sbjct: 279 RKYIYLTYKF 288




23|Sequence|111|120|TNHKFNVTGT

>sp|Y1326_METJA|UNCHARACTERIZED GTP-binding protein MJ1326|Methanocaldococcus jannaschii (strain

Query: 2 NHKFNVTG 9
NHKFN+ G
Sbjct: 15 NHKFNIVG 22


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 3 HKFNVTG 9
HKF VTG
Sbjct: 118 HKFEVTG 124


>sp|TRUD_SULTO|PROBABLE tRNA pseudouridine synthase D|Sulfurisphaera tokodaii (strain DSM

Query: 1 TNHKFNVTG 9
+N KFN TG
Sbjct: 116 SNSKFNHTG 124


>sp|PGK_PYRWO|PHOSPHOGLYCERATE kinase|Pyrococcus woesei

Query: 3 HKFNVTG 9
+K+N+TG
Sbjct: 366 YKYNITG 372


>sp|PGK_PYRFU|PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HKFNVTG 9
+K+N+TG
Sbjct: 366 YKYNITG 372




24|Sequence|116|125|NVTGTPEQYV

>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 4 GTPEQY 9
GTPEQY
Sbjct: 979 GTPEQY 984


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 1 NVTGTPEQYV 10
+ G+PEQYV
Sbjct: 206 DADGSPEQYV 215


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 4 GTPEQY 9
GTPEQY
Sbjct: 978 GTPEQY 983


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 4 GTPEQY 9
GTPEQY
Sbjct: 971 GTPEQY 976


>sp|NNR_METKA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanopyrus kandleri (strain

Query: 1 NVTGTPEQYV 10
NVTGTP V
Sbjct: 413 NVTGTPAMTV 422


>sp|GCSH_AERPE|PROBABLE glycine cleavage system H|Aeropyrum pernix (strain ATCC 700893

Query: 5 TPEQYV 10
TPEQYV
Sbjct: 130 TPEQYV 135


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VTGTPEQY 9
V+G PE+Y
Sbjct: 70 VSGRPEEY 77


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 1 NVTGTPEQYV 10
N G PE+Y+
Sbjct: 79 NGPGIPEEYI 88


>sp|NNR_PYRAE|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Pyrobaculum aerophilum (strain

Query: 1 NVTGTPEQYV 10
N+TGTP V
Sbjct: 423 NMTGTPAMTV 432


>sp|MER_METTM|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 NVTGTPEQYV 10
+V GTP++++
Sbjct: 274 SVVGTPDEFI 283


>sp|MER_METTH|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 NVTGTPEQYV 10
+V GTP++++
Sbjct: 274 SVVGTPDEFI 283


>sp|RS2_PYRAE|SMALL ribosomal subunit protein uS2|Pyrobaculum aerophilum (strain ATCC

Query: 3 TGTPEQYV 10
T TP QY+
Sbjct: 149 TDTPHQYI 156


>sp|RS2_PYRCJ|SMALL ribosomal subunit protein uS2|Pyrobaculum calidifontis (strain DSM

Query: 3 TGTPEQYV 10
T TP QY+
Sbjct: 149 TDTPHQYI 156


>sp|RS2_PYRNV|SMALL ribosomal subunit protein uS2|Pyrobaculum neutrophilum (strain DSM

Query: 3 TGTPEQYV 10
T TP QY+
Sbjct: 148 TDTPHQYI 155


>sp|RS2_PYRIL|SMALL ribosomal subunit protein uS2|Pyrobaculum islandicum (strain DSM

Query: 3 TGTPEQYV 10
T TP QY+
Sbjct: 149 TDTPHQYI 156


>sp|RS2_PYRAR|SMALL ribosomal subunit protein uS2|Pyrobaculum arsenaticum (strain DSM

Query: 3 TGTPEQYV 10
T TP QY+
Sbjct: 149 TDTPHQYI 156


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NVTGTPEQYV 10
N G PE+Y+
Sbjct: 79 NGPGIPEEYI 88


>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VTGTPEQYV 10
+ GTP +YV
Sbjct: 194 LIGTPSRYV 202


>sp|CBID_METTH|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanothermobacter thermautotrophicus

Query: 2 VTGTPE 7
+TGTPE
Sbjct: 84 ITGTPE 89


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 NVTGTPEQYV 10
N G PE+Y+
Sbjct: 81 NGPGIPEKYI 90


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 4 GTPEQY 9
G PEQY
Sbjct: 892 GVPEQY 897


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 1 NVTGTPEQYV 10
N G PE+Y+
Sbjct: 79 NGPGIPEKYI 88


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM

Query: 1 NVTGTPEQYV 10
N G PE+Y+
Sbjct: 79 NGPGIPEKYI 88


>sp|ACDG_METKA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanopyrus kandleri

Query: 3 TGTPEQY 9
TG PE+Y
Sbjct: 138 TGDPEKY 144


>sp|HACA_METTH|PROBABLE methanogen homoaconitase large subunit|Methanothermobacter

Query: 2 VTGTPEQYV 10
VTG PE +V
Sbjct: 169 VTGEPEGHV 177




25|Sequence|121|130|PEQYVPYSTT

>sp|LYSZ_PYRHO|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrococcus horikoshii

Query: 2 EQYVPYST 9
E+Y PYS+
Sbjct: 209 EEYFPYSS 216


>sp|TF2B2_HALVD|TRANSCRIPTION initiation factor IIB 2|Haloferax volcanii (strain ATCC 29605

Query: 1 PEQYVP 6
PEQYVP
Sbjct: 241 PEQYVP 246


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 PEQYVPYSTT 10
PEQ+VP T
Sbjct: 202 PEQFVPVPAT 211


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PEQYVPYSTT 10
PE YVP + T
Sbjct: 97 PEAYVPRTDT 106


>sp|HMDH_HALVD|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Haloferax volcanii (strain ATCC 29605

Query: 2 EQYVPYSTT 10
E+Y+P +TT
Sbjct: 90 EKYLPLATT 98


>sp|Y1239_METJA|UNCHARACTERIZED protein MJ1239|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YVPYST 9
YVPY+T
Sbjct: 153 YVPYAT 158


>sp|FLPA_METHJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanospirillum hungatei JF-1

Query: 1 PEQYVPY 7
PE+Y+P+
Sbjct: 105 PERYLPF 111


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 1 PEQYVPY 7
PE+Y+P+
Sbjct: 84 PEEYIPH 90


>sp|RS9_AERPE|SMALL ribosomal subunit protein uS9|Aeropyrum pernix (strain ATCC 700893

Query: 1 PEQYVPYS 8
PE+Y+ YS
Sbjct: 134 PEKYMRYS 141


>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 1 PEQYVPYSTT 10
P+Q +PY+ +
Sbjct: 118 PDQVIPYAKS 127


>sp|MTD_ARCFU|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Archaeoglobus

Query: 1 PEQYVP 6
PE+Y+P
Sbjct: 217 PEKYIP 222


>sp|Y252_PYRCJ|UPF0248 protein Pcal_0252|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EQYVPY 7
E+Y+PY
Sbjct: 52 ERYIPY 57


>sp|Y2518_PYRAE|UPF0248 protein PAE2518|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EQYVPY 7
E+Y+PY
Sbjct: 52 ERYIPY 57


>sp|Y1919_PYRIL|UPF0248 protein Pisl_1919|Pyrobaculum islandicum (strain DSM 4184

Query: 2 EQYVPY 7
E+Y+PY
Sbjct: 52 ERYIPY 57


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 1 PEQYVPYSTT 10
PE Y+P + T
Sbjct: 97 PEAYIPQTDT 106


>sp|DPHB_STAMF|DIPHTHINE synthase|Staphylothermus marinus (strain ATCC 43588

Query: 1 PEQYVPYST 9
PE + PYST
Sbjct: 140 PEYFKPYST 148


>sp|Y1039_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 1 PEQYVP 6
PE+YVP
Sbjct: 132 PEEYVP 137


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PEQYVPY 7
PE+Y+P+
Sbjct: 84 PEEYIPH 90


>sp|TF2B_CALMQ|TRANSCRIPTION initiation factor IIB|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PEQYVP 6
P QYVP
Sbjct: 244 PRQYVP 249


>sp|TF2B6_HALSA|TRANSCRIPTION initiation factor IIB 6|Halobacterium salinarum (strain ATCC 700922

Query: 1 PEQYVP 6
PE YVP
Sbjct: 229 PESYVP 234


>sp|RPO4_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo4|Saccharolobus solfataricus (strain

Query: 2 EQYVPYS 8
E Y+PYS
Sbjct: 9 EHYIPYS 15


>sp|RPO4_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo4|Saccharolobus shibatae (strain ATCC

Query: 2 EQYVPYST 9
E Y+PYS
Sbjct: 9 EHYIPYSV 16


>sp|MTD_METTM|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanothermobacter

Query: 1 PEQYVP 6
P+QY+P
Sbjct: 220 PDQYIP 225


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 PEQYVP 6
PE+Y+P
Sbjct: 86 PEKYIP 91


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EQYVPYST 9
++Y+PY T
Sbjct: 403 QKYIPYVT 410


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 2 EQYVPYST 9
++Y+PY T
Sbjct: 403 QKYIPYVT 410


>sp|KORA_METTH|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter thermautotrophicus

Query: 1 PEQYVPYS 8
PE+++P+S
Sbjct: 198 PEEFLPFS 205


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 2 EQYVPYST 9
+QY+P+ T
Sbjct: 205 DQYIPFKT 212


>sp|FLPA_METMJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanoculleus marisnigri (strain

Query: 1 PEQYVPY 7
PE+Y P+
Sbjct: 107 PEEYAPF 113


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EQYVPYST 9
++Y+PY T
Sbjct: 403 QRYIPYVT 410


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 1 PEQYVPYSTT 10
PE++VP T
Sbjct: 202 PERFVPVPAT 211


>sp|URIC_HALVD|URICASE volcanii (strain ATCC 29605

Query: 1 PEQYVP 6
PE+YVP
Sbjct: 217 PERYVP 222




26|Sequence|126|135|PYSTTRKKIQ

>sp|HIS3_PYRAE|PHOSPHORIBOSYL-AMP cyclohydrolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 YSTTRKKI 9
YSTTRK+I
Sbjct: 63 YSTTRKRI 70


>sp|HIS3_PYRCJ|PHOSPHORIBOSYL-AMP cyclohydrolase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YSTTRKKI 9
YST+RK+I
Sbjct: 63 YSTSRKRI 70


>sp|HIS3_METJA|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YSTTRKKI 9
YST+RKK+
Sbjct: 57 YSTSRKKL 64


>sp|NQOR_METBF|NAD(P)H dehydrogenase (quinone)|Methanosarcina barkeri (strain Fusaro /

Query: 1 PYSTTRKK 8
PYS TR++
Sbjct: 152 PYSETRQR 159


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PYSTTRKKIQ 10
PY+ KKIQ
Sbjct: 541 PYTYREKKIQ 550




27|Sequence|131|145|RKKIQEWIPPSTPYK

>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RKKIQEWIPPSTPYK 15
R +++ W PPS YK
Sbjct: 521 RNRLKRWSPPSPRYK 535


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RKKIQEWIPPSTPYK 15
+K+ EW PP YK
Sbjct: 524 KKRADEWTPPPPKYK 538


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RKKIQEWIPPSTPYK 15
+ +++ W PPS YK
Sbjct: 521 KNRLKRWSPPSPRYK 535


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RKKIQEWIPPSTPYK 15
+ +++ W PPS YK
Sbjct: 521 KNRLKRWSPPSPRYK 535


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 RKKIQEWIPPSTPYK 15
+ +++ W PPS YK
Sbjct: 521 KNRLKRWSPPSPRYK 535


>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RKKIQEWIPPSTPYK 15
+ +++ W PPS YK
Sbjct: 521 KNRLKRWSPPSPRYK 535


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RKKIQEWIPPSTPYK 15
+ +++ W PPS YK
Sbjct: 521 KNRLKRWSPPSPRYK 535


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RKKIQEWIPPSTPYK 15
+ +++ W PPS YK
Sbjct: 521 KNRLKRWSPPSPRYK 535


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RKKIQEWIPPSTPYK 15
++++ W PP YK
Sbjct: 522 KRRLNNWSPPEPRYK 536


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 RKKIQEWIPPSTPYK 15
+ + ++W PP YK
Sbjct: 522 KSRAKDWTPPEPRYK 536


>sp|HBCAL_NITMS|4-HYDROXYBUTYRATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RKKIQEWIPP 10
RKKI E IPP
Sbjct: 334 RKKIDEVIPP 343


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KKIQEWIPPSTP 13
K ++ W PPS P
Sbjct: 352 KLLERWQPPSVP 363


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KKIQEWIPPSTPYK 15
++ ++W PP YK
Sbjct: 524 RRRRQWTPPPPKYK 537


Query: 2 KKIQEWIPPSTP 13
K ++ W PP+ P
Sbjct: 352 KLLERWEPPAVP 363


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 2 KKIQEWIPPSTP 13
KK+QE +PP P
Sbjct: 371 KKVQEMVPPRPP 382


>sp|LIPA_PYRCJ|LIPOYL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 KIQEWIPP 10
++Q W+PP
Sbjct: 240 EVQRWVPP 247


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KKIQEWIPPSTP 13
K ++ W PP+ P
Sbjct: 352 KLLERWQPPAVP 363


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KKIQEWIPPSTPYK 15
K+ + W PP YK
Sbjct: 524 KRRKAWAPPPPKYK 537


Query: 2 KKIQEWIPPSTP 13
K ++ W PP+ P
Sbjct: 352 KLLERWEPPAVP 363


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 2 KKIQEWIPPSTP 13
KK+QE +PP P
Sbjct: 371 KKVQEIVPPRPP 382


>sp|TRPF_SACS2|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RKKIQEWIPPSTPYK 15
RK+I ++P S YK
Sbjct: 96 RKRIILYVPASFEYK 110


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 IQEWIPPSTP 13
+QEWI + P
Sbjct: 257 VQEWIAENVP 266


>sp|Y1618_METJA|UNCHARACTERIZED protein MJ1618|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 7 WIPPSTPYK 15
+IPP TP+K
Sbjct: 89 YIPPKTPHK 97


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RKKIQEWIPPSTPY 14
R I +PP +P+
Sbjct: 179 RTAIMSNVPPDSPF 192


>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 3 KIQEWIPP 10
+++EW PP
Sbjct: 517 RLEEWEPP 524


>sp|RFCL_THEVO|REPLICATION factor C large subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RKKIQEWI 8
R+KIQ WI
Sbjct: 22 RQKIQSWI 29


>sp|IF2A_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 1 RKKIQEW 7
++KIQEW
Sbjct: 89 KEKIQEW 95


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 4 IQEWIPPSTP 13
IQEWI + P
Sbjct: 258 IQEWISENLP 267


>sp|GCSH_HALSA|PROBABLE glycine cleavage system H|Halobacterium salinarum (strain ATCC

Query: 5 QEWIPPST 12
EWI P+T
Sbjct: 15 HEWIDPAT 22


>sp|GCSH_HALS3|PROBABLE glycine cleavage system H|Halobacterium salinarum (strain ATCC

Query: 5 QEWIPPST 12
EWI P+T
Sbjct: 15 HEWIDPAT 22


>sp|TRPD_METMA|ANTHRANILATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC

Query: 2 KKIQEWIPPSTPYK 15
KK I P+TP++
Sbjct: 63 KKAGNMIKPNTPFR 76


>sp|SYW_METJA|TRYPTOPHAN--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKKIQEWIPPSTPY 14
R K ++IPPS+ Y
Sbjct: 231 RAKEFKFIPPSSTY 244


>sp|Y426_ARCFU|UNCHARACTERIZED protein AF_0426|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KIQEWI 8
KIQEW+
Sbjct: 228 KIQEWL 233


>sp|RFCL_THEAC|REPLICATION factor C large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 RKKIQEWIPP 10
RK+I EWI
Sbjct: 23 RKQITEWIES 32


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 9 PPSTPY 14
PPS PY
Sbjct: 237 PPSPPY 242


>sp|TRPF_SULAC|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RKKIQEWIPPSTPYK 15
RKK+ ++P S Y+
Sbjct: 93 RKKVILYVPSSDMYQ 107


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KKIQEWIPPSTPY 14
KKI E PP Y
Sbjct: 384 KKIGEIFPPENRY 396


>sp|SYS_METB6|SERINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 IQEWIPPSTPYK 15
I+ W+P YK
Sbjct: 338 IEAWMPRENAYK 349


>sp|Y915_ARCFU|UNCHARACTERIZED protein AF_0915|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RKKIQEW 7
RKK+ EW
Sbjct: 3 RKKVVEW 9


>sp|MDH_THEAC|MALATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KKIQEWI 8
KK+ EWI
Sbjct: 314 KKVDEWI 320


>sp|SYH_PYRIL|HISTIDINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KKIQEWIPP 10
+ +++W+PP
Sbjct: 13 RGMRDWLPP 21


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 RKKIQEWI 8
+K++QEWI
Sbjct: 23 KKQLQEWI 30


>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 KKIQEWIP 9
K+I+ W P
Sbjct: 45 KRIERWFP 52


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 8 IPPSTPYK 15
+PPS+P K
Sbjct: 139 VPPSSPAK 146


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KKIQEWIPP 10
+ +++W+PP
Sbjct: 13 RGMRDWLPP 21


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RKKIQEWI 8
+K++QEWI
Sbjct: 23 KKELQEWI 30


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 RKKIQEWI 8
+K++QEWI
Sbjct: 23 KKELQEWI 30


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 8 IPPSTP 13
+PPSTP
Sbjct: 143 VPPSTP 148


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 RKKIQEWI 8
+K++QEWI
Sbjct: 23 KKELQEWI 30


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RKKIQEWI 8
+K++QEWI
Sbjct: 23 KKELQEWI 30


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 1 RKKIQEWI 8
+K++QEWI
Sbjct: 23 KKELQEWI 30


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 RKKIQEWI 8
+K++QEWI
Sbjct: 23 KKELQEWI 30


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KKIQEWIPP 10
+ +++W+PP
Sbjct: 13 RGMRDWLPP 21


>sp|APGM_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KKIQEWIP 9
KKI+E++P
Sbjct: 168 KKIEEYLP 175


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 7 WIPPSTPYK 15
W PP YK
Sbjct: 529 WSPPPPKYK 537


Query: 2 KKIQEWIPPSTP 13
K + W PP P
Sbjct: 352 KLLDRWQPPPLP 363


>sp|HPCAL_NITMS|3-HYDROXYPROPIONATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 2 KKIQEWIPPSTP 13
KK++ PP+ P
Sbjct: 583 KKMKSRFPPAVP 594


>sp|DTDA_METBU|D-AMINOACYL-TRNA deacylase|Methanococcoides burtonii (strain DSM 6242

Query: 3 KIQEWIPPSTP 13
K+++W+ S P
Sbjct: 34 KLRDWVEMSVP 44


>sp|COFG_METPE|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 QEWIPPS 11
Q W PPS
Sbjct: 304 QGWYPPS 310


>sp|Y505_METJA|UNCHARACTERIZED protein MJ0505|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KKIQEWIPP 10
KKI+ +IPP
Sbjct: 141 KKIKYFIPP 149


>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 3 KIQEWIPPSTP 13
+++ IPP TP
Sbjct: 726 ELEARIPPDTP 736


>sp|Y1042_SACS2|UPF0201 protein SSO1042|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KKIQEWIPPSTPY 14
K+I +W+ P T +
Sbjct: 120 KEIVDWLAPKTAH 132


>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM

Query: 9 PPSTPY 14
PP TPY
Sbjct: 94 PPYTPY 99


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RKKIQEWIPPST 12
RK+IQ +PP T
Sbjct: 850 RKEIQNPLPPFT 861


>sp|Y1178_METTH|UPF0251 protein MTH_1178|Methanothermobacter thermautotrophicus (strain

Query: 6 EWIPPSTPYK 15
EWI P YK
Sbjct: 107 EWISPEKEYK 116


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KIQEWIPPS 11
KI+EWI S
Sbjct: 198 KIEEWIKNS 206


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 4 IQEWIPPSTP 13
I+EWI + P
Sbjct: 258 IEEWISENLP 267


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM 14266

Query: 4 IQEWIPPSTP 13
I+EWI + P
Sbjct: 258 IEEWISENLP 267


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 4 IQEWIPPSTP 13
I+EWI + P
Sbjct: 258 IEEWISENLP 267


>sp|IF2A_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 1 RKKIQEW 7
R K+QEW
Sbjct: 91 RAKVQEW 97


>sp|Y833_METJA|UNCHARACTERIZED protein MJ0833|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 7 WIPPSTPYK 15
WIPP T K
Sbjct: 98 WIPPYTTVK 106


>sp|LYSX_SULTO|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KKIQEWI 8
+KI+EWI
Sbjct: 277 RKIEEWI 283


>sp|HEM3_NITMS|PROBABLE porphobilinogen deaminase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RKKIQEW 7
R+K++EW
Sbjct: 302 REKVEEW 308




28|Sequence|136|145|EWIPPSTPYK

>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EWIPPSTPYK 10
EW PP YK
Sbjct: 529 EWTPPPPKYK 538


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EWIPPSTPYK 10
+W PP YK
Sbjct: 527 DWTPPEPRYK 536


>sp|Y1618_METJA|UNCHARACTERIZED protein MJ1618|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WIPPSTPYK 10
+IPP TP+K
Sbjct: 89 YIPPKTPHK 97


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EWIPPSTPYK 10
+W PP YK
Sbjct: 528 QWTPPPPKYK 537


>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM

Query: 4 PPSTPY 9
PP TPY
Sbjct: 94 PPYTPY 99


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 WIPPSTPYK 10
+IPPS Y+
Sbjct: 296 FIPPSATYQ 304


>sp|SYW_METJA|TRYPTOPHAN--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EWIPPSTPY 9
++IPPS+ Y
Sbjct: 236 KFIPPSSTY 244


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 PPSTPY 9
PPS PY
Sbjct: 237 PPSPPY 242


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 WIPPSTP 8
W PPS P
Sbjct: 357 WQPPSVP 363


>sp|LEU1_METKA|PROBABLE 2-isopropylmalate synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 IPPSTP 8
+PP+TP
Sbjct: 270 VPPNTP 275


>sp|Y1178_METTH|UPF0251 protein MTH_1178|Methanothermobacter thermautotrophicus (strain

Query: 1 EWIPPSTPYK 10
EWI P YK
Sbjct: 107 EWISPEKEYK 116


>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 3 IPPSTP 8
IPP TP
Sbjct: 731 IPPDTP 736


>sp|GCSH_HALSA|PROBABLE glycine cleavage system H|Halobacterium salinarum (strain ATCC

Query: 1 EWIPPST 7
EWI P+T
Sbjct: 16 EWIDPAT 22


>sp|GCSH_HALS3|PROBABLE glycine cleavage system H|Halobacterium salinarum (strain ATCC

Query: 1 EWIPPST 7
EWI P+T
Sbjct: 16 EWIDPAT 22


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 WIPPSTPYK 10
W PP YK
Sbjct: 529 WAPPPPKYK 537


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 3 IPPSTP 8
+PPSTP
Sbjct: 143 VPPSTP 148


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 5 PSTPY 9
PSTPY
Sbjct: 198 PSTPY 202


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WIPPSTPY 9
+IPPS+ Y
Sbjct: 290 FIPPSSTY 297


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PPSTPYK 10
PP PYK
Sbjct: 9 PPVEPYK 15


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WIPPSTPYK 10
W PP YK
Sbjct: 529 WSPPPPKYK 537


>sp|Y833_METJA|UNCHARACTERIZED protein MJ0833|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WIPPSTPYK 10
WIPP T K
Sbjct: 98 WIPPYTTVK 106


>sp|Y276_ARCFU|UPF0284 protein AF_0276|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IPPSTPY 9
+PP PY
Sbjct: 103 VPPKIPY 109


>sp|RUBR1_METJA|PROBABLE Rubredoxin-1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IPPSTPYK 10
IPP TP++
Sbjct: 42 IPPKTPFE 49






THE END