NDUAB_HUMAN Blast Output
Viruses
1|Sequence|1|10|MAPKVFRQYW

>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)

Query: 3 PKVFRQYW 10
PKV+R++W
Sbjct: 1536 PKVYRRFW 1543


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 3 PKVFRQYW 10
PKVF+++W
Sbjct: 1538 PKVFKRFW 1545


>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)

Query: 3 PKVFRQYW 10
PK++R++W
Sbjct: 1536 PKIYRKFW 1543


>sp|VG88_BPML5|GENE 88 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 APKVFRQYW 10
APK+FR +W
Sbjct: 104 APKLFRIHW 112


>sp|VG88_BPMD2|GENE 88 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 APKVFRQYW 10
APK+FR +W
Sbjct: 104 APKLFRIHW 112


>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)

Query: 3 PKVFRQYW 10
PK+F+++W
Sbjct: 1538 PKIFKRFW 1545


>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)

Query: 3 PKVFRQYW 10
PK+F+++W
Sbjct: 1538 PKIFKRFW 1545


>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)

Query: 3 PKVFRQYW 10
PK+F+++W
Sbjct: 1538 PKIFKRFW 1545


>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)

Query: 3 PKVFRQYW 10
PK+F+++W
Sbjct: 1538 PKIFKRFW 1545


>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)

Query: 3 PKVFRQYW 10
PK+F+++W
Sbjct: 1538 PKIFKRFW 1545


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 3 PKVFRQYW 10
PK+++++W
Sbjct: 1536 PKIYKKFW 1543


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 3 PKVFRQYW 10
PK+++++W
Sbjct: 1536 PKIYKKFW 1543


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 3 PKVFRQYW 10
PK+++++W
Sbjct: 1536 PKIYKKFW 1543


>sp|TFNPH_ASFK5|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 1 MAPKVFRQY 9
M+P+ +RQY
Sbjct: 289 MSPEQYRQY 297


>sp|TFNPH_ASFP4|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 1 MAPKVFRQY 9
M+P+ +RQY
Sbjct: 289 MSPEQYRQY 297


>sp|VF706_ASFWA|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 1 MAPKVFRQY 9
M+P+ +RQY
Sbjct: 289 MSPEQYRQY 297


>sp|TFNPH_ASFM2|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 1 MAPKVFRQY 9
M+P+ +RQY
Sbjct: 289 MSPEQYRQY 297


>sp|TFNPH_ASFB7|TERMINATION factor NPH-I homolog|African swine fever virus (strain

Query: 1 MAPKVFRQY 9
M+P+ +RQY
Sbjct: 289 MSPEQYRQY 297


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 1 MAPKVFRQYW 10
M P+ F++ W
Sbjct: 1539 MTPRTFKEEW 1548


>sp|VGLX_BHV1S|GLYCOPROTEIN GX|Bovine herpesvirus 1.2 (strain ST)

Query: 1 MAPKVFRQYW 10
M P +RQY+
Sbjct: 107 MVPLAYRQYF 116


>sp|LEF1_NPVOP|LATE expression factor 1|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 APKVFRQYW 10
APK R++W
Sbjct: 134 APKSLREHW 142


>sp|YL285_MIMIV|UNCHARACTERIZED protein L285|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 APKVFRQY 9
AP VFR Y
Sbjct: 94 APSVFRNY 101


>sp|VG56_ICHVA|UNCHARACTERIZED protein ORF56|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 PKVFRQYW 10
PK+F + W
Sbjct: 900 PKIFTELW 907


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 1 MAPKVFRQYW 10
+ P+V RQ W
Sbjct: 1945 LDPEVIRQLW 1954


>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977

Query: 3 PKVFRQYW 10
PKV+R Y+
Sbjct: 112 PKVYRTYF 119


>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)

Query: 3 PKVFRQYW 10
PK+F + W
Sbjct: 452 PKIFEEKW 459


>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 3 PKVFRQYW 10
PKV+R Y+
Sbjct: 112 PKVYRTYF 119


>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 3 PKVFRQYW 10
PKV+R Y+
Sbjct: 112 PKVYRTYF 119


>sp|VG66_BPMD2|GENE 66 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 APKVFRQYW 10
AP++ R YW
Sbjct: 91 APRLSRLYW 99


>sp|Y195_AFV1Y|UNCHARACTERIZED protein ORF195|Acidianus filamentous virus 1 (isolate

Query: 3 PKVFRQYW 10
PK+F QY+
Sbjct: 172 PKLFEQYF 179


>sp|YL109_MIMIV|PUTATIVE ankyrin repeat protein L109|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 APKVFRQY 9
APK FR Y
Sbjct: 190 APKEFRYY 197




2|Sequence|6|15|FRQYWDIPDG

>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 2 RQYWDIPDG 10
R+++DIP+G
Sbjct: 1306 REFFDIPEG 1314


>sp|RMIL_AVII1|SERINE/THREONINE-PROTEIN kinase-transforming protein Rmil|Avian retrovirus IC10

Query: 5 WDIPDG 10
W+IPDG
Sbjct: 60 WEIPDG 65


>sp|RMIL_AVEVR|SERINE/THREONINE-PROTEIN kinase-transforming protein Rmil|Avian rous-associated virus type

Query: 5 WDIPDG 10
W+IPDG
Sbjct: 76 WEIPDG 81


>sp|CAPSP_ADEB2|PENTON protein|Bovine adenovirus 2 (BAdV-2) (Mastadenovirus

Query: 4 YWDIPD 9
YW IPD
Sbjct: 20 YWSIPD 25


>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30

Query: 3 QYWDIP 8
+YWD+P
Sbjct: 394 KYWDVP 399


>sp|DPO21_BPK64|DEPOLYMERASE, capsule KN5-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 1 FRQYWDIPDG 10
+R W IP G
Sbjct: 1120 YRNQWSIPAG 1129


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 RQYWDIPD 9
RQ+ D+PD
Sbjct: 961 RQHLDVPD 968


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 RQYWDIPD 9
RQ+ D+PD
Sbjct: 961 RQHLDVPD 968


>sp|ENV_IPMAE|ENVELOPE glycoprotein|Mouse intracisternal a-particle MIAE (IAP-MIAE)

Query: 1 FRQYWDIPDG 10
F QYW I D
Sbjct: 258 FAQYWGIHDA 267


>sp|RDRP_QRFVE|RNA-DIRECTED RNA polymerase catalytic subunit|Quaranfil virus (isolate

Query: 2 RQYWDIPDG 10
RQYW DG
Sbjct: 85 RQYWMETDG 93


>sp|ITP_PSHV1|INNER tegument protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 5 WDIPDG 10
W++PDG
Sbjct: 682 WNMPDG 687


>sp|YL674_MIMIV|PUTATIVE BTB/POZ domain-containing protein L674|Acanthamoeba polyphaga

Query: 2 RQYWDIPD 9
R Y+DIP+
Sbjct: 315 RDYYDIPN 322


>sp|DPOL_HHBV|PROTEIN P|Heron hepatitis B virus (HHBV)

Query: 1 FRQYWDIPD 9
F +W IPD
Sbjct: 103 FNPHWKIPD 111


>sp|DIPP_ASFP4|MRNA-DECAPPING protein g5R|African swine fever virus (isolate

Query: 1 FRQYWDIPD 9
FR+ W +PD
Sbjct: 99 FRKNWLLPD 107


>sp|DIPP_ASFWA|MRNA-DECAPPING protein g5R|African swine fever virus (isolate

Query: 1 FRQYWDIPD 9
FR+ W +PD
Sbjct: 95 FRKNWLLPD 103


>sp|DIPP_ASFB7|MRNA-DECAPPING protein g5R|African swine fever virus (strain

Query: 1 FRQYWDIPD 9
FR+ W +PD
Sbjct: 99 FRKNWLLPD 107


>sp|DIPP_ASFK5|MRNA-DECAPPING protein g5R|African swine fever virus (isolate

Query: 1 FRQYWDIPD 9
F++ W IPD
Sbjct: 95 FKKNWLIPD 103


>sp|NRAM_I75A5|NEURAMINIDASE A virus (strain A/Tern/Australia/G70C/1975

Query: 1 FRQYWDIPDG 10
F WD PDG
Sbjct: 454 FLGQWDWPDG 463


>sp|DIPP_ASFM2|MRNA-DECAPPING protein g5R|African swine fever virus (isolate

Query: 1 FRQYWDIPD 9
F++ W IPD
Sbjct: 95 FKKNWLIPD 103


>sp|L83L_ASFB7|PROTEIN L83L|African swine fever virus (strain

Query: 2 RQYWDIPDG 10
R+Y D+P+G
Sbjct: 63 RKYNDVPEG 71


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 1 FRQYWD 6
FRQ WD
Sbjct: 1543 FRQEWD 1548


>sp|Y06L_BPT4|UNCHARACTERIZED 17.7 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 5 WDIPDG 10
WDIP G
Sbjct: 40 WDIPKG 45


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 1 FRQYWDIPD 9
FR Y+D+ D
Sbjct: 528 FRNYFDVID 536


>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 1 FRQYWDIPD 9
FR Y+D+ D
Sbjct: 528 FRNYFDVID 536


>sp|MVP_PPVSK|P3N-PIPO polyprotein|Plum pox potyvirus (strain SK

Query: 1 FRQYWDIPD 9
FR Y+D+ D
Sbjct: 528 FRNYFDVID 536


>sp|MVP_PPVNA|P3N-PIPO polyprotein|Plum pox potyvirus (isolate NAT)

Query: 1 FRQYWDIPD 9
FR Y+D+ D
Sbjct: 528 FRNYFDVID 536


>sp|MVP_PPVD|P3N-PIPO polyprotein|Plum pox potyvirus (strain D)

Query: 1 FRQYWDIPD 9
FR Y+D+ D
Sbjct: 529 FRNYFDVID 537


>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 1 FRQYWDIPD 9
FR Y+D+ D
Sbjct: 528 FRNYFDVID 536


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 1 FRQYWDIPD 9
FR Y+D+ D
Sbjct: 529 FRNYFDVID 537


>sp|POL_AVIRE|GAG-POL polyprotein|Avian reticuloendotheliosis virus

Query: 4 YWDIPDG 10
+W +PDG
Sbjct: 784 WWHLPDG 790


>sp|ENV_FENV1|ENVELOPE glycoprotein|Feline endogenous virus ECE1

Query: 5 WDIPD 9
WDIPD
Sbjct: 78 WDIPD 82


>sp|CAPSP_ADES1|PENTON protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 4 YWDIPD 9
YW +PD
Sbjct: 315 YWSLPD 320


>sp|L83L_ASFK5|PROTEIN L83L|African swine fever virus (isolate

Query: 2 RQYWDIPDG 10
R Y D+P+G
Sbjct: 61 RNYIDVPEG 69


>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)

Query: 4 YWDIPDG 10
YW +PD
Sbjct: 148 YWKLPDA 154


>sp|CAPSD_RBDVR|CAPSID protein|Raspberry bushy dwarf virus (isolate

Query: 2 RQYWD 6
R+YWD
Sbjct: 74 REYWD 78


>sp|US03_CHV9D|SERINE/THREONINE-PROTEIN kinase US3 homolog|Cercopithecine herpesvirus 9 (strain DHV)

Query: 1 FRQYWDIPD 9
F ++DIPD
Sbjct: 330 FAAFYDIPD 338


>sp|V143_NPVOP|ATP-DEPENDENT DNA helicase P143|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 FRQYWDIPD 9
FR+ W++ D
Sbjct: 650 FRELWNLDD 658


>sp|PTPJ3_MDBVW|TYROSINE phosphatase-like protein J3|Microplitis demolitor bracovirus

Query: 1 FRQYWDIPDG 10
F QYW +G
Sbjct: 129 FHQYWSPNEG 138


>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12

Query: 4 YWDIPD 9
YW +PD
Sbjct: 364 YWSLPD 369


>sp|L83L_ASFWA|PROTEIN L83L|African swine fever virus (isolate

Query: 2 RQYWDIPDG 10
R+Y D+P+G
Sbjct: 61 RKYNDVPEG 69


>sp|CAPSP_ADEP3|PENTON protein|Porcine adenovirus A serotype 3

Query: 4 YWDIPD 9
YW +PD
Sbjct: 351 YWSLPD 356


>sp|CAPSP_ADECR|PENTON protein|Canine adenovirus serotype 1 (strain

Query: 4 YWDIPD 9
YW +PD
Sbjct: 344 YWSLPD 349


>sp|CAPSP_ADECC|PENTON protein|Canine adenovirus serotype 1 (strain

Query: 4 YWDIPD 9
YW +PD
Sbjct: 344 YWSLPD 349


>sp|YR656_MIMIV|UNCHARACTERIZED protein R656|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 QYWDIPDG 10
QY+D P+G
Sbjct: 70 QYFDPPEG 77


>sp|E3RDB_ADE02|EARLY 3 receptor internalization and|Human adenovirus C serotype 2

Query: 1 FRQYWDIP 8
F Q W+IP
Sbjct: 34 FTQIWNIP 41


>sp|E3B14_ADE06|EARLY E3B 14.5 kDa protein|Human adenovirus C serotype 6

Query: 1 FRQYWDIP 8
F Q W+IP
Sbjct: 34 FTQIWNIP 41


>sp|CAPS1_MIMIV|CAPSID protein 1|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 WDIPD 9
WD+PD
Sbjct: 158 WDVPD 162


>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2

Query: 4 YWDIPD 9
YW +PD
Sbjct: 438 YWSLPD 443


>sp|P4_RTBVP|PROTEIN P4|Rice tungro bacilliform virus (isolate

Query: 4 YWDIPD 9
YW +PD
Sbjct: 188 YWTVPD 193


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 3 QYWDIP 8
+YW++P
Sbjct: 815 KYWEVP 820


>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5

Query: 4 YWDIPD 9
YW +PD
Sbjct: 438 YWSLPD 443


>sp|CAPSP_ADEM1|PENTON protein|Murine adenovirus A serotype 1

Query: 4 YWDIPD 9
YW +PD
Sbjct: 354 YWSLPD 359


>sp|L83L_ASFP4|PROTEIN L83L|African swine fever virus (isolate

Query: 2 RQYWDIPDG 10
R+Y D+P+G
Sbjct: 61 RKYNDVPEG 69




3|Sequence|11|20|DIPDGTDCHR

>sp|NS3B_CVCBG|NON-STRUCTURAL protein 3b|Canine coronavirus (strain BGF10) (CCoV)

Query: 1 DIPDGTDCHR 10
D+P G +CHR
Sbjct: 241 DVPSGINCHR 250


>sp|VG72_ICHVA|UNCHARACTERIZED protein ORF72|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 PDGTDCHR 10
PD T CHR
Sbjct: 150 PDATRCHR 157


>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3 PDGTDCHR 10
PD T CHR
Sbjct: 53 PDSTPCHR 60


>sp|RDRP_BPPH6|RNA-DIRECTED RNA polymerase|Pseudomonas phage phi6 (Bacteriophage phi-6)

Query: 1 DIPDGTDCHR 10
D+PDG C R
Sbjct: 260 DVPDGFFCER 269


>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 PDGTDCHR 10
PD T CHR
Sbjct: 63 PDSTPCHR 70


>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 PDGTDCHR 10
PD T CHR
Sbjct: 63 PDSTPCHR 70


>sp|DPOL_DHBV3|PROTEIN P|Duck hepatitis B virus (strain

Query: 2 IPDGTDC 8
IPDGT C
Sbjct: 354 IPDGTSC 360


>sp|CHMA_BPDPK|CHIMALLIN phage phiKZ

Query: 1 DIPDGTDCHR 10
D+PD D HR
Sbjct: 77 DLPDDFDIHR 86


>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl

Query: 2 IPDGTDCHR 10
+PDG CH+
Sbjct: 270 LPDGPLCHQ 278


>sp|RDRP_MRNV|RNA-DIRECTED RNA polymerase|Macrobrachium rosenbergii nodavirus (MrNV)

Query: 2 IPDGTDCHR 10
+P G DC+R
Sbjct: 931 VPGGEDCNR 939


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 2 IPDGTDCHR 10
I D TDC+R
Sbjct: 924 IVDSTDCNR 932


>sp|HEMA_I82A1|HEMAGGLUTININ A virus (strain A/Mallard/Astrakhan/263/1982

Query: 4 DGTDCH 9
DG DCH
Sbjct: 76 DGQDCH 81


>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)

Query: 3 PDGTDCHR 10
PD D HR
Sbjct: 441 PDAVDLHR 448


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 2 IPDGTDCHR 10
+ D TDC+R
Sbjct: 924 VVDSTDCNR 932


>sp|SPIK1_ADEG1|FIBER protein 1|Fowl adenovirus A serotype 1

Query: 4 DGTDC 8
DGTDC
Sbjct: 442 DGTDC 446


>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|PA_I86A3|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/Tennessee/5/1986

Query: 2 IPDGTDCHR 10
IP G CH+
Sbjct: 270 IPGGPPCHQ 278


>sp|GG_EHV1K|ENVELOPE glycoprotein G|Equine herpesvirus 1 (strain Kentucky

Query: 1 DIPDGTDCH 9
D P+ +DCH
Sbjct: 242 DYPNISDCH 250


>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|GG_EHV1V|ENVELOPE glycoprotein G|Equine herpesvirus 1 (strain V592)

Query: 1 DIPDGTDCH 9
D P+ +DCH
Sbjct: 242 DYPNISDCH 250


>sp|GG_EHV1B|ENVELOPE glycoprotein G|Equine herpesvirus 1 (strain Ab4p)

Query: 1 DIPDGTDCH 9
D P+ +DCH
Sbjct: 242 DYPNISDCH 250


>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 3 PDGTDCH 9
PD DCH
Sbjct: 309 PDYDDCH 315


>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|CAPSD_VESVA|CAPSID protein VP1|Vesicular exanthema of swine virus

Query: 3 PDGTDC 8
PDGT C
Sbjct: 93 PDGTPC 98


>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121


>sp|RDRP_ICRSV|RNA replication protein|Indian citrus ringspot virus (isolate

Query: 1 DIPDGTDCHR 10
D+P+ T HR
Sbjct: 751 DLPETTTTHR 760


>sp|CAPSD_SMSV1|CAPSID protein VP1|San Miguel sea lion virus

Query: 3 PDGTDC 8
PDGT C
Sbjct: 93 PDGTPC 98


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 IPDGTDCH 9
IP+ TDC+
Sbjct: 3404 IPERTDCN 3411




4|Sequence|16|25|TDCHRKAYST

>sp|Y142_NPVOP|UNCHARACTERIZED 55.8 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 DCHRKAY 8
DC+RK Y
Sbjct: 327 DCYRKLY 333




5|Sequence|21|30|KAYSTTSIAS

***** No hits found ******


6|Sequence|26|35|TSIASVAGLT

***** No hits found ******


7|Sequence|31|40|VAGLTAAAYR

>sp|MMP_SFAVA|PUTATIVE matrix metalloproteinase|Spodoptera frugiperda ascovirus 1a

Query: 1 VAGLTAAAY 9
V G+TAAA+
Sbjct: 89 VVGVTAAAF 97




8|Sequence|36|45|AAAYRVTLNP

>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)

Query: 4 YRVTLNP 10
Y++T+NP
Sbjct: 156 YKITINP 162


>sp|NS2A_CVBQ|NON-STRUCTURAL protein 2a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 4 YRVTLNP 10
Y++T+NP
Sbjct: 156 YKITINP 162


>sp|NS2A_CVBOK|NON-STRUCTURAL protein 2a|Bovine coronavirus (strain OK-0514) (BCoV)

Query: 4 YRVTLNP 10
Y++T+NP
Sbjct: 156 YKITINP 162


>sp|NS2A_CVBM|NON-STRUCTURAL protein 2a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 4 YRVTLNP 10
Y++T+NP
Sbjct: 156 YKITINP 162


>sp|NS2A_CVBLY|NON-STRUCTURAL protein 2a|Bovine coronavirus (strain LY-138) (BCoV)

Query: 4 YRVTLNP 10
Y++T+NP
Sbjct: 156 YKITINP 162


>sp|NS2A_CVBLU|NON-STRUCTURAL protein 2a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 4 YRVTLNP 10
Y++T+NP
Sbjct: 156 YKITINP 162


>sp|NS2A_CVBLS|NON-STRUCTURAL protein 2a|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)

Query: 4 YRVTLNP 10
Y++T+NP
Sbjct: 156 YKITINP 162


>sp|NS2A_CVBEN|NON-STRUCTURAL protein 2a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 4 YRVTLNP 10
Y++T+NP
Sbjct: 156 YKITINP 162


>sp|DPOL_GPCMV|DNA polymerase|Guinea pig cytomegalovirus (strain 22122)

Query: 4 YRVTLN 9
YRVTLN
Sbjct: 214 YRVTLN 219




9|Sequence|41|50|VTLNPPGTFL

>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain

Query: 1 VTLNPPG 7
VTL+PPG
Sbjct: 3 VTLSPPG 9


>sp|PKG1_ADEG1|PACKAGING protein 1|Fowl adenovirus A serotype 1

Query: 3 LNPPGTF 9
L+PPGTF
Sbjct: 430 LSPPGTF 436


>sp|VP2_EHDV1|OUTER capsid protein VP2|Epizootic hemorrhagic disease virus 1

Query: 4 NPPGTFL 10
NP GTFL
Sbjct: 30 NPNGTFL 36


>sp|FIB37_BPS16|LONG tail fiber protein Gp37|Salmonella phage S16 (Salmonella phage

Query: 3 LNPPGTFL 10
L PPGT+L
Sbjct: 259 LAPPGTWL 266


>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate

Query: 4 NPPGTFL 10
NPPG F+
Sbjct: 2066 NPPGDFV 2072


>sp|BPI_BPP2|BASEPLATE protein I|Escherichia phage P2 (Bacteriophage P2)

Query: 4 NPPGTF 9
+PPGTF
Sbjct: 108 DPPGTF 113


>sp|SRC_RSVP|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus subgroup C

Query: 4 NPPGTFL 10
NP GTFL
Sbjct: 167 NPRGTFL 173


>sp|SRC_RSVH1|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus (strain H-19)

Query: 4 NPPGTFL 10
NP GTFL
Sbjct: 167 NPRGTFL 173


>sp|SRC_AVIST|TYROSINE-PROTEIN kinase transforming protein Src|Avian sarcoma virus (strain S2)

Query: 4 NPPGTFL 10
NP GTFL
Sbjct: 167 NPRGTFL 173


>sp|SRC_RSVSE|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus subgroup E

Query: 4 NPPGTFL 10
NP GTFL
Sbjct: 167 NPRGTFL 173


>sp|SRC_RSVSA|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus subgroup A

Query: 4 NPPGTFL 10
NP GTFL
Sbjct: 167 NPRGTFL 173


>sp|CAPSD_CMVAS|CAPSID protein|Cucumber mosaic virus (strain As)

Query: 1 VTLNPP 6
+TLNPP
Sbjct: 73 ITLNPP 78


>sp|SRC_AVISR|TYROSINE-PROTEIN kinase transforming protein Src|Avian sarcoma virus (strain

Query: 4 NPPGTFL 10
NP GTFL
Sbjct: 167 NPRGTFL 173


>sp|SRC_RSVPA|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus (strain PA101T)

Query: 4 NPPGTFL 10
NP GTFL
Sbjct: 164 NPRGTFL 170


>sp|SRC_AVISS|TYROSINE-PROTEIN kinase transforming protein Src|Avian sarcoma virus (strain S1)

Query: 4 NPPGTFL 10
NP GTFL
Sbjct: 167 NPRGTFL 173


>sp|SRC_AVIS2|TYROSINE-PROTEIN kinase transforming protein Src|Avian sarcoma virus (strain PR2257)

Query: 4 NPPGTFL 10
NP GTFL
Sbjct: 167 NPRGTFL 173


>sp|GE_CHV1E|ENVELOPE glycoprotein E|Cercopithecine herpesvirus 1 (strain E2490)

Query: 1 VTLNPPGTFL 10
V+L PPG L
Sbjct: 74 VSLRPPGQVL 83




10|Sequence|46|55|PGTFLEGVAK

>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1 PGTFLEGVAK 10
PG + GVAK
Sbjct: 200 PGAYFPGVAK 209


>sp|1A_OLV2I|REPLICATION protein 1a|Olive latent virus 2 (isolate

Query: 1 PGTFLEGVAK 10
PG FLE V++
Sbjct: 450 PGEFLEPVSE 459


>sp|RDRP_SCVLA|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-A

Query: 3 TFLEGVAK 10
++LEG+AK
Sbjct: 68 SYLEGIAK 75


>sp|GAG_SCVLA|MAJOR capsid protein|Saccharomyces cerevisiae virus L-A (ScV-L-A)

Query: 3 TFLEGVAK 10
++LEG+AK
Sbjct: 68 SYLEGIAK 75


>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10

Query: 3 TFLEGVAK 10
TFL+GV K
Sbjct: 494 TFLQGVPK 501




11|Sequence|51|60|EGVAKVGQYT

>sp|ENV_MLVHO|ENVELOPE glycoprotein|Hortulanus murine leukemia virus (HoMuLV)

Query: 1 EGVAKVGQYT 10
EGVA VG Y+
Sbjct: 346 EGVAVVGPYS 355


>sp|YL888_MIMIV|UNCHARACTERIZED protein L888|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 EGVAKVGQYT 10
+G+A V QYT
Sbjct: 237 QGLATVSQYT 246


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 1 EGVAKVGQ 8
EG+AK+G+
Sbjct: 865 EGIAKIGE 872


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)

Query: 1 EGVAKVGQ 8
EG+AK+G+
Sbjct: 865 EGIAKIGE 872


>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)

Query: 1 EGVAKVGQ 8
EG+A+VG+
Sbjct: 1168 EGIARVGE 1175


>sp|ENV_MLVRK|ENVELOPE glycoprotein|Radiation murine leukemia virus (strain

Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 346 EGVAVLGTYS 355


>sp|ENV_MLVRD|ENVELOPE glycoprotein|Radiation murine leukemia virus

Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 346 EGVAVLGTYS 355


>sp|ENV_MLVMS|ENVELOPE glycoprotein|Moloney murine leukemia virus (isolate

Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 348 EGVAVLGTYS 357


>sp|ENV_MLVFR|ENVELOPE glycoprotein|Friend murine leukemia virus (FrMLV)

Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 324 EGVAVLGTYS 333


>sp|ENV_MLVFP|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 358 EGVAVLGTYS 367


>sp|ENV_MLVFF|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 358 EGVAVLGTYS 367


>sp|ENV_MLVF5|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 358 EGVAVLGTYS 367


>sp|ENV_MLVAV|ENVELOPE glycoprotein|AKV murine leukemia virus (AKR

Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 349 EGVAVLGTYS 358


>sp|ENV_FLVC6|ENVELOPE glycoprotein|Feline leukemia virus (isolate CFE-6)

Query: 1 EGVAKVGQYT 10
EG+A +G Y+
Sbjct: 344 EGIAVLGNYS 353


>sp|ENV_RMCFV|ENVELOPE glycoprotein|Rauscher mink cell focus-inducing virus

Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 322 EGVAVLGTYS 331


>sp|DPOL_SHV21|DNA polymerase catalytic subunit|Saimiriine herpesvirus 2 (strain 11)

Query: 1 EGVAKVGQY 9
EG AK+G Y
Sbjct: 475 EGRAKIGLY 483


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 1 EGVAKVGQY 9
+G AKVG Y
Sbjct: 486 DGRAKVGNY 494


>sp|HMUDK_BPPM6|5-HMDU DNA kinase|Pseudomonas phage M6

Query: 1 EGVAKVGQYT 10
+G+A +G YT
Sbjct: 47 DGIAIIGDYT 56


>sp|ENV_FLVSA|ENVELOPE glycoprotein|Feline leukemia virus (strain C/Sarma)

Query: 1 EGVAKVGQYT 10
EG+A +G Y+
Sbjct: 321 EGIAVLGNYS 330


>sp|ENV_MCFF3|ENVELOPE glycoprotein|Mink cell focus-forming murine leukemia

Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 319 EGVAVLGTYS 328


>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 323 EGVAVLGTYS 332


>sp|POLN_AURAV|POLYPROTEIN P1234|Aura virus (AURAV)

Query: 1 EGVAKVGQYT 10
EG ++G YT
Sbjct: 555 EGDVRIGSYT 564


>sp|ENV_MCFF|ENVELOPE glycoprotein|Mink cell focus-forming murine leukemia

Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 319 EGVAVLGTYS 328


>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 323 EGVAVLGTYS 332


>sp|ENV_FLVLB|ENVELOPE glycoprotein|Feline leukemia virus (strain B/lambda-B1)

Query: 1 EGVAKVGQYT 10
EG+A +G Y+
Sbjct: 344 EGIAVLGNYS 353


>sp|ENV_FSVST|ENVELOPE glycoprotein|Feline sarcoma virus (strain Snyder-Theilen)

Query: 1 EGVAKVGQYT 10
EG+A +G Y+
Sbjct: 344 EGIAVLGNYS 353


>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 323 EGVAVLGTYS 332


>sp|DNBI_EHV2|MAJOR DNA-binding protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 GVAKVGQY 9
GVA VG+Y
Sbjct: 885 GVADVGEY 892




12|Sequence|56|65|VGQYTFTAAA

>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 4 YTFTAA 9
YTFTAA
Sbjct: 10 YTFTAA 15




13|Sequence|61|70|FTAAAVGAVF

>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 TAAAVGAVF 10
T AA+GAVF
Sbjct: 2894 TNAAMGAVF 2902


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 TAAAVGAVF 10
T AA+GAVF
Sbjct: 2894 TNAAMGAVF 2902


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 TAAAVGAVF 10
T AA+GAVF
Sbjct: 2894 TNAAMGAVF 2902


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 TAAAVGAVF 10
T AA+GAVF
Sbjct: 2894 TNAAMGAVF 2902


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 TAAAVGAVF 10
T AA+GAVF
Sbjct: 2894 TNAAMGAVF 2902


>sp|RDRP_TBSVC|RNA-DIRECTED RNA polymerase|Tomato bushy stunt virus (strain

Query: 1 FTAAAVGAVF 10
+TA VGA+F
Sbjct: 505 YTADEVGAIF 514


>sp|RDRP_CRV|RNA-DIRECTED RNA polymerase|Cymbidium ringspot virus (CymRSV)

Query: 1 FTAAAVGAVF 10
+TA VGA+F
Sbjct: 505 YTADEVGAIF 514


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2894 AAIGAVF 2900


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2894 AAIGAVF 2900


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2894 AAIGAVF 2900


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2894 AAIGAVF 2900


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2894 AAIGAVF 2900


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2899 AAIGAVF 2905


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2898 AAIGAVF 2904


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2899 AAIGAVF 2905




14|Sequence|66|75|VGAVFGLTTC

>sp|RDRP_TBSVC|RNA-DIRECTED RNA polymerase|Tomato bushy stunt virus (strain

Query: 1 VGAVFGLTTC 10
V VFG TTC
Sbjct: 492 VDGVFGETTC 501


>sp|RDRP_CNV|RNA-DIRECTED RNA polymerase|Cucumber necrosis virus (CNV)

Query: 1 VGAVFGLTTC 10
V VFG TTC
Sbjct: 492 VDGVFGETTC 501


>sp|RDRP_CRV|RNA-DIRECTED RNA polymerase|Cymbidium ringspot virus (CymRSV)

Query: 1 VGAVFGLTTC 10
V VFG TTC
Sbjct: 492 VDDVFGETTC 501


>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka

Query: 5 FGLTTC 10
FG TTC
Sbjct: 193 FGFTTC 198


>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain

Query: 5 FGLTTC 10
FG TTC
Sbjct: 193 FGFTTC 198


>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 VGAVFGL 7
VG+VFGL
Sbjct: 54 VGSVFGL 60


>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 VGAVFGL 7
VG+VFGL
Sbjct: 54 VGSVFGL 60


>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 VGAVFGL 7
VG+VFGL
Sbjct: 54 VGSVFGL 60


>sp|PKG1_ADEB3|PACKAGING protein 1|Bovine adenovirus B serotype 3

Query: 1 VGAVFGLTTC 10
+G V+G T C
Sbjct: 164 IGVVYGPTGC 173




15|Sequence|71|80|GLTTCISAHV

>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)

Query: 1 GLTTCIS 7
G+TTCIS
Sbjct: 132 GITTCIS 138


>sp|PRIM_SUHVK|DNA primase|Suid herpesvirus 1 (strain Kaplan)

Query: 1 GLTTCISAHV 10
G+T C++ HV
Sbjct: 66 GVTFCLTGHV 75


>sp|ENV_MLVF5|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 1 GLTTCISAHV 10
GLT C+SA V
Sbjct: 433 GLTPCLSATV 442


>sp|ENV_RMCFV|ENVELOPE glycoprotein|Rauscher mink cell focus-inducing virus

Query: 1 GLTTCISAHV 10
GLT C+SA V
Sbjct: 397 GLTPCLSATV 406


>sp|ENV_MLVFP|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 1 GLTTCISAHV 10
GLT C+SA V
Sbjct: 433 GLTPCLSATV 442


>sp|ENV_MLVFF|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 1 GLTTCISAHV 10
GLT C+SA V
Sbjct: 433 GLTPCLSATV 442


>sp|MUNS_REOVJ|PROTEIN mu-NS|Reovirus type 2 (strain D5/Jones)

Query: 4 TCISAHV 10
TCI++HV
Sbjct: 571 TCINSHV 577


>sp|ENV_FENV1|ENVELOPE glycoprotein|Feline endogenous virus ECE1

Query: 1 GLTTCISAHV 10
GLT CIS +
Sbjct: 424 GLTPCISLQI 433


>sp|ENV_MLVFR|ENVELOPE glycoprotein|Friend murine leukemia virus (FrMLV)

Query: 1 GLTTCISAHV 10
GLT C+SA V
Sbjct: 399 GLTPCLSATV 408


>sp|VP91_NPVEP|CAPSID-ASSOCIATED protein Vp91|Epiphyas postvittana nucleopolyhedrovirus (EppoMNPV)

Query: 2 LTTCISAH 9
L TC+ AH
Sbjct: 270 LMTCVQAH 277


>sp|TYSY_SHV21|THYMIDYLATE synthase|Saimiriine herpesvirus 2 (strain 11)

Query: 2 LTTCISAHV 10
L TC+ AHV
Sbjct: 213 LLTCMIAHV 221


>sp|TYSY_HSVAT|THYMIDYLATE synthase|Herpesvirus ateles

Query: 2 LTTCISAHV 10
L TC+ AHV
Sbjct: 209 LLTCMIAHV 217


>sp|ENV_FLVSA|ENVELOPE glycoprotein|Feline leukemia virus (strain C/Sarma)

Query: 1 GLTTCISAHV 10
GLT CIS V
Sbjct: 396 GLTPCISMAV 405


>sp|VP91_NPVCF|CAPSID-ASSOCIATED protein Vp91|Choristoneura fumiferana nuclear polyhedrosis virus

Query: 1 GLTTCISAH 9
L TC+ AH
Sbjct: 269 ALMTCVHAH 277


>sp|ENV_FLVC6|ENVELOPE glycoprotein|Feline leukemia virus (isolate CFE-6)

Query: 1 GLTTCISAHV 10
GLT CIS V
Sbjct: 419 GLTPCISMAV 428


>sp|ENV_FLVGL|ENVELOPE glycoprotein|Feline leukemia virus (strain A/Glasgow-1)

Query: 1 GLTTCISAHV 10
GLT CIS V
Sbjct: 399 GLTPCISMAV 408


>sp|ENV_FLVLB|ENVELOPE glycoprotein|Feline leukemia virus (strain B/lambda-B1)

Query: 1 GLTTCISAHV 10
GLT CIS V
Sbjct: 419 GLTPCISMAV 428


>sp|ENV_FSVSM|ENVELOPE glycoprotein|Feline sarcoma virus (strain SM)

Query: 1 GLTTCISAHV 10
GLT CIS V
Sbjct: 402 GLTPCISMAV 411


>sp|ENV_FSVGA|ENVELOPE glycoprotein|Feline sarcoma virus (strain Gardner-Arnstein)

Query: 1 GLTTCISAHV 10
GLT CIS V
Sbjct: 419 GLTPCISMAV 428


>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 GLTTCI 6
G+TTCI
Sbjct: 132 GITTCI 137


>sp|ENV_KORV|ENVELOPE glycoprotein|Koala retrovirus (KoRV)

Query: 1 GLTTCISAHV 10
GLT C+S V
Sbjct: 416 GLTPCLSTSV 425


>sp|ENV_MLVMS|ENVELOPE glycoprotein|Moloney murine leukemia virus (isolate

Query: 1 GLTTCISAHV 10
GLT CIS +
Sbjct: 423 GLTPCISTTI 432


>sp|ENV_FLVCA|ENVELOPE glycoprotein|Feline leukemia virus (strain C/FA27)

Query: 1 GLTTCISAHV 10
GLT CIS V
Sbjct: 359 GLTPCISMAV 368


>sp|ENV_GALV|ENVELOPE glycoprotein|Gibbon ape leukemia virus (GALV)

Query: 1 GLTTCISAHV 10
GLT C+S V
Sbjct: 442 GLTPCLSTSV 451




16|Sequence|76|85|ISAHVREKPD

>sp|Y030_OSHVF|UNCHARACTERIZED protein ORF30|Ostreid herpesvirus 1 (isolate France)

Query: 1 ISAHVREKPD 10
+ H R KPD
Sbjct: 134 METHFRNKPD 143


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 4 HVREKPD 10
HV+ KPD
Sbjct: 469 HVKRKPD 475


>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)

Query: 5 VREKPD 10
+REKPD
Sbjct: 81 IREKPD 86


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 4 HVREKPD 10
HV+E PD
Sbjct: 637 HVKEMPD 643




17|Sequence|81|90|REKPDDPLNY

>sp|CARG1_BPCA1|CARGO protein 1|Bacteroides phage crAss001 (Bacteroides phage

Query: 2 EKPDDPLN 9
E+P+DPL+
Sbjct: 517 ERPNDPLS 524


>sp|NS2_MPRVN|PUTATIVE non-structural protein 2|Micromonas pusilla reovirus (isolate

Query: 2 EKPDDPLNY 10
E PD P NY
Sbjct: 81 EAPDQPANY 89


>sp|RDRP_IBDV5|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus

Query: 1 REKPDDP 7
+ KPDDP
Sbjct: 433 KSKPDDP 439


>sp|Y00E_BPT4|UNCHARACTERIZED 13.8 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 EKPDDPLN 9
EKP+DP +
Sbjct: 83 EKPEDPTD 90


>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 3 KPDDPLN 9
+PDDP N
Sbjct: 223 RPDDPTN 229


>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 KPDDPLN 9
+PDDP N
Sbjct: 223 RPDDPTN 229


>sp|TATR_NPVBM|TRANS-ACTIVATING transcriptional regulatory protein|Bombyx mori nuclear

Query: 1 REKPDDPLNY 10
+++P+D LNY
Sbjct: 31 KQQPNDYLNY 40


>sp|NPH2_MSEPV|RNA helicase NPH-II|Melanoplus sanguinipes entomopoxvirus (MsEPV)

Query: 3 KPDDP 7
KPDDP
Sbjct: 572 KPDDP 576


>sp|VG67_ICHVA|UNCHARACTERIZED protein ORF67|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 KPDDP 7
KPDDP
Sbjct: 1033 KPDDP 1037




18|Sequence|86|95|DPLNYFLGGC

>sp|SPIKE_ADES1|FIBER protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 DPLNYFLGG 9
DPLN LGG
Sbjct: 48 DPLNVTLGG 56


>sp|YR556_MIMIV|UNCHARACTERIZED protein R556|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DPLNYFLGGC 10
+P++ FLG C
Sbjct: 42 EPISTFLGKC 51


>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)

Query: 3 LNYFLG 8
LNYFLG
Sbjct: 35 LNYFLG 40


>sp|UL24_HHV6U|PROTEIN UL24 homolog|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 LNYFLG 8
LNYFLG
Sbjct: 35 LNYFLG 40


>sp|UL24_HHV6G|PROTEIN UL24 homolog|Human herpesvirus 6A (strain GS)

Query: 3 LNYFLG 8
LNYFLG
Sbjct: 35 LNYFLG 40


>sp|DPOL_EHV1V|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain V592)

Query: 1 DPLNYFLGGC 10
D LN+ GGC
Sbjct: 92 DVLNFASGGC 101


>sp|DPOL_EHV1B|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain Ab4p)

Query: 1 DPLNYFLGGC 10
D LN+ GGC
Sbjct: 92 DVLNFASGGC 101


>sp|ARC3_CBCP|MONO-ADP-RIBOSYLTRANSFERASE C3|Clostridium botulinum C phage (Clostridium

Query: 1 DPLNYFLG 8
DP++YF G
Sbjct: 203 DPISYFPG 210


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 1 DPLNYFLGG 9
+ LNY LGG
Sbjct: 914 EKLNYTLGG 922


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 1 DPLNYFLGG 9
+ LNY LGG
Sbjct: 914 EKLNYTLGG 922


>sp|RP147_VACCW|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Western Reserve)

Query: 1 DPLNYFLGG 9
+ LNY LGG
Sbjct: 914 EKLNYTLGG 922


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 DPLNYFLGG 9
+ LNY LGG
Sbjct: 914 EKLNYTLGG 922


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 DPLNYFLGG 9
+ LNY LGG
Sbjct: 914 EKLNYTLGG 922


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 1 DPLNYFLGG 9
+ LNY LGG
Sbjct: 914 EKLNYTLGG 922


>sp|RP147_FOWPN|DNA-DIRECTED RNA polymerase 147 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 1 DPLNYFLGG 9
+ LNY LGG
Sbjct: 914 EKLNYTLGG 922


>sp|VG72_GAHVM|UNCHARACTERIZED gene 72 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 4 NYFLGGC 10
NYF GC
Sbjct: 408 NYFPNGC 414


>sp|P32K_ADEO7|STRUCTURAL protein p32K|Ovine adenovirus D serotype 7

Query: 1 DPLNYFLG 8
D L YFLG
Sbjct: 199 DGLGYFLG 206




19|Sequence|91|100|FLGGCAGGLT

>sp|CATV_GVCPM|VIRAL cathepsin|Cydia pomonella granulosis virus (isolate

Query: 4 GCAGGL 9
GCAGGL
Sbjct: 185 GCAGGL 190


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 3 GGCAGG 8
GGCAGG
Sbjct: 1307 GGCAGG 1312


>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 GGCAGGL 9
GGCAGG+
Sbjct: 162 GGCAGGV 168


>sp|DPOL_DHBV1|PROTEIN P|Duck hepatitis B virus (strain

Query: 2 LGGCAGGLT 10
LG C GG+T
Sbjct: 12 LGDCFGGIT 20


>sp|VF317_ASFWA|UNCHARACTERIZED protein F317L|African swine fever virus (isolate

Query: 2 LGGCAGGL 9
LG C GG+
Sbjct: 174 LGSCCGGM 181


>sp|VF317_ASFP4|UNCHARACTERIZED protein F317L|African swine fever virus (isolate

Query: 2 LGGCAGGL 9
LG C GG+
Sbjct: 174 LGSCCGGM 181


>sp|VF317_ASFM2|UNCHARACTERIZED protein F317L|African swine fever virus (isolate

Query: 2 LGGCAGGL 9
LG C GG+
Sbjct: 176 LGSCCGGM 183


>sp|VF317_ASFK5|UNCHARACTERIZED protein F317L|African swine fever virus (isolate

Query: 2 LGGCAGGL 9
LG C GG+
Sbjct: 174 LGSCCGGM 181


>sp|VF317_ASFB7|UNCHARACTERIZED protein F317L|African swine fever virus (strain

Query: 2 LGGCAGGL 9
LG C GG+
Sbjct: 174 LGSCCGGM 181


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1311 GGCSGG 1316


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1309 GGCSGG 1314


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308


>sp|EXLYS_PBCV1|EXOLYSIN bursaria Chlorella virus 1

Query: 1 FLGGCAG 7
F GGC G
Sbjct: 620 FYGGCTG 626


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1307 GGCSGG 1312


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1307 GGCSGG 1312


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1304 GGCSGG 1309


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1305 GGCSGG 1310


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1307 GGCSGG 1312


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1307 GGCSGG 1312


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1308 GGCSGG 1313


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1301 GGCSGG 1306


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1309 GGCSGG 1314


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1308 GGCSGG 1313


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1308 GGCSGG 1313


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1304 GGCSGG 1309


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1304 GGCSGG 1309


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308


>sp|VG63_ICHVA|UNCHARACTERIZED protein ORF63|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 LGGCAGG 8
L GC GG
Sbjct: 88 LAGCTGG 94


>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)

Query: 3 GGCAGG 8
GGC GG
Sbjct: 130 GGCRGG 135


>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)

Query: 3 GGCAGG 8
GGC GG
Sbjct: 130 GGCRGG 135


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 3 GGCAGG 8
GGC GG
Sbjct: 1303 GGCPGG 1308




20|Sequence|96|105|AGGLTLGART

>sp|SPIKE_FIPV|SPIKE glycoprotein|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 AGGLTLGA 8
AGG+TLGA
Sbjct: 1025 AGGITLGA 1032


>sp|SPIKE_CVPRT|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 AGGLTLGA 8
AGG+TLGA
Sbjct: 1020 AGGITLGA 1027


>sp|SPIKE_CVPRM|SPIKE glycoprotein|Porcine respiratory coronavirus (strain RM4)

Query: 1 AGGLTLGA 8
AGG+TLGA
Sbjct: 798 AGGITLGA 805


>sp|SPIKE_CVPR8|SPIKE glycoprotein|Porcine respiratory coronavirus (strain 86/137004

Query: 1 AGGLTLGA 8
AGG+TLGA
Sbjct: 798 AGGITLGA 805


>sp|SPIKE_CVPPU|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 AGGLTLGA 8
AGG+TLGA
Sbjct: 1020 AGGITLGA 1027


>sp|SPIKE_CVPMI|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 AGGLTLGA 8
AGG+TLGA
Sbjct: 1022 AGGITLGA 1029


>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 AGGLTLGA 8
AGG+TLGA
Sbjct: 1022 AGGITLGA 1029


>sp|SPIKE_CVCBG|SPIKE glycoprotein|Canine coronavirus (strain BGF10) (CCoV)

Query: 1 AGGLTLGA 8
AGG+TLGA
Sbjct: 1026 AGGITLGA 1033


>sp|SPIKE_CVCAK|SPIKE glycoprotein|Canine coronavirus (strain K378) (CCoV)

Query: 1 AGGLTLGA 8
AGG+TLG+
Sbjct: 1026 AGGITLGS 1033


>sp|SPIKE_CVCAI|SPIKE glycoprotein|Canine coronavirus (strain Insavc-1) (CCoV)

Query: 2 GGLTLGA 8
GG+TLGA
Sbjct: 1025 GGITLGA 1031


>sp|Y018_HVAVE|UNCHARACTERIZED protein ORF18|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 2 GGLTLGART 10
GG+ LG RT
Sbjct: 85 GGVYLGGRT 93


>sp|TRX1_EHV1V|TRIPLEX capsid protein 1|Equine herpesvirus 1 (strain V592)

Query: 1 AGGLTLGART 10
AGG+ GART
Sbjct: 265 AGGVQEGART 274


>sp|TRX1_EHV1B|TRIPLEX capsid protein 1|Equine herpesvirus 1 (strain Ab4p)

Query: 1 AGGLTLGART 10
AGG+ GART
Sbjct: 265 AGGVQEGART 274


>sp|SPIKE_BC512|SPIKE glycoprotein|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 GGLTLGART 10
GG+TLG T
Sbjct: 950 GGMTLGGIT 958




21|Sequence|101|110|LGARTHNYGI

>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)

Query: 1 LGARTHNYGI 10
LGAR +NY +
Sbjct: 1299 LGAREYNYKV 1308


>sp|DPOL_ASHV|PROTEIN P|Arctic squirrel hepatitis virus (ASHV)

Query: 1 LGARTHNY 8
LGARTH +
Sbjct: 589 LGARTHEH 596


>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3

Query: 1 LGARTHNY 8
LGAR H Y
Sbjct: 317 LGARVHYY 324


>sp|AEPE_BPA50|L-ALANYL-D-GLUTAMATE peptidase|Listeria phage A500 (Bacteriophage A500)

Query: 2 GARTHNYGI 10
G HNYG+
Sbjct: 76 GQSNHNYGV 84


>sp|NSP_PYMVV|NUCLEAR shuttle protein|Potato yellow mosaic virus (isolate

Query: 1 LGARTHNYG 9
GAR H++G
Sbjct: 152 FGARIHSHG 160


>sp|NSP_ABMVW|NUCLEAR shuttle protein|Abutilon mosaic virus (isolate West

Query: 1 LGARTHNYG 9
GAR H++G
Sbjct: 152 FGARIHSHG 160


>sp|NS3A_BCHK5|NON-STRUCTURAL protein 3a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 ARTHNYGI 10
ARTH Y I
Sbjct: 83 ARTHRYPI 90


>sp|POL_FLV|GAG-POL polyprotein|Feline leukemia virus

Query: 3 ARTHNYGI 10
AR HN G+
Sbjct: 21 ARAHNQGV 28


>sp|GGAG_FSVST|GLYCO-GAG protein|Feline sarcoma virus (strain Snyder-Theilen)

Query: 3 ARTHNYGI 10
AR HN G+
Sbjct: 95 ARAHNQGV 102


>sp|GGAG_FSVHZ|GLYCO-GAG protein|Feline sarcoma virus (strain Hardy-Zuckerman

Query: 3 ARTHNYGI 10
AR HN G+
Sbjct: 95 ARAHNQGV 102


>sp|GGAG_FSVGA|GLYCO-GAG protein|Feline sarcoma virus (strain Gardner-Arnstein)

Query: 3 ARTHNYGI 10
AR HN G+
Sbjct: 98 ARAHNQGV 105


>sp|GGAG_FLV|GLYCO-GAG protein|Feline leukemia virus

Query: 3 ARTHNYGI 10
AR HN G+
Sbjct: 95 ARAHNQGV 102


>sp|GAG_FSVST|GAG polyprotein|Feline sarcoma virus (strain Snyder-Theilen)

Query: 3 ARTHNYGI 10
AR HN G+
Sbjct: 21 ARAHNQGV 28


>sp|GAG_FSVHZ|GAG polyprotein|Feline sarcoma virus (strain Hardy-Zuckerman

Query: 3 ARTHNYGI 10
AR HN G+
Sbjct: 21 ARAHNQGV 28


>sp|GAG_FSVGR|CORE protein p15|Feline sarcoma virus (strain Gardner-Rasheed)

Query: 3 ARTHNYGI 10
AR HN G+
Sbjct: 21 ARAHNQGV 28


>sp|GAG_FSVGA|GAG polyprotein|Feline sarcoma virus (strain Gardner-Arnstein)

Query: 3 ARTHNYGI 10
AR HN G+
Sbjct: 21 ARAHNQGV 28


>sp|GAG_FLV|GAG polyprotein|Feline leukemia virus

Query: 3 ARTHNYGI 10
AR HN G+
Sbjct: 21 ARAHNQGV 28


>sp|NSP_TGMVY|NUCLEAR shuttle protein|Tomato golden mosaic virus (strain

Query: 1 LGARTHNYG 9
GAR H++G
Sbjct: 152 FGARIHSHG 160


>sp|NSP_CALCV|NUCLEAR shuttle protein|Cabbage leaf curl virus (isolate

Query: 1 LGARTHNYG 9
GAR H++G
Sbjct: 152 FGARIHSHG 160




22|Sequence|106|115|HNYGIGAAAC

>sp|RDRP_SBWMN|REPLICASE large subunit|Soil-borne wheat mosaic virus (strain

Query: 1 HNYGIG 6
H+YG+G
Sbjct: 944 HSYGVG 949


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 2 NYGIGA 7
NYG+GA
Sbjct: 2728 NYGLGA 2733


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 NYGIGAA 8
NYG+G A
Sbjct: 6356 NYGVGIA 6362


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 2 NYGIGA 7
NYG+GA
Sbjct: 2728 NYGLGA 2733




23|Sequence|111|120|GAAACVYFGI

>sp|RDRP_GGNNV|RNA-DIRECTED RNA polymerase|Greasy grouper nervous necrosis virus

Query: 1 GAAACVYFG 9
GAA CVY G
Sbjct: 13 GAAFCVYTG 21


>sp|V040_FOWPN|UNCHARACTERIZED serpin-like protein FPV040|Fowlpox virus (strain NVSL) (FPV)

Query: 5 CVYFGI 10
C+YFG+
Sbjct: 327 CIYFGV 332


>sp|POL1_BAMMN|GENOME polyprotein 1|Barley mild mosaic virus (strain

Query: 3 AACVYFG 9
AAC+YF
Sbjct: 2115 AACIYFA 2121


>sp|LEF7_NPVAC|LATE expression factor 7|Autographa californica nuclear polyhedrosis

Query: 1 GAAACVYF 8
G A+CV+F
Sbjct: 93 GKASCVFF 100


>sp|GE_EHV1D|ENVELOPE glycoprotein E|Equine herpesvirus 1 (strain Kentucky

Query: 4 ACVYFGI 10
AC++FG+
Sbjct: 9 ACIFFGL 15


>sp|GE_EHV1B|ENVELOPE glycoprotein E|Equine herpesvirus 1 (strain Ab4p)

Query: 4 ACVYFGI 10
AC++FG+
Sbjct: 9 ACIFFGL 15


>sp|GE_EHV1A|ENVELOPE glycoprotein E|Equine herpesvirus 1 (strain AB1)

Query: 4 ACVYFGI 10
AC++FG+
Sbjct: 9 ACIFFGL 15


>sp|PLYCA_BPSC1|ENDOLYSIN PlyC, large catalytic subunit|Streptococcus phage C1

Query: 1 GAAACVYFG 9
GAA VYFG
Sbjct: 174 GAAPLVYFG 182


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 GAAACVYFGI 10
G ACVY G+
Sbjct: 1726 GMRACVYAGV 1735


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 GAAACVYFGI 10
G ACVY G+
Sbjct: 1733 GMRACVYAGV 1742


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 GAAACVYFGI 10
G ACVY G+
Sbjct: 1733 GMRACVYAGV 1742


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 GAAACVYFGI 10
G ACVY G+
Sbjct: 1726 GMRACVYAGV 1735


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 3 AACVYF 8
+ACVYF
Sbjct: 639 SACVYF 644


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 3 AACVYF 8
+ACVYF
Sbjct: 641 SACVYF 646


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 3 AACVYF 8
+ACVYF
Sbjct: 641 SACVYF 646


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 GAAACVYFGI 10
G C YFG+
Sbjct: 3762 GYCCCCYFGL 3771


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 GAAACVYFGI 10
G C YFG+
Sbjct: 3764 GYCCCCYFGL 3773


>sp|YIE2_BHV4D|UNCHARACTERIZED protein in IE2 5'region|Bovine herpesvirus 4 (strain DN-599)

Query: 1 GAAACVYF 8
G A+CVY
Sbjct: 199 GVASCVYL 206


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 GAAACVYFGI 10
G C YFG+
Sbjct: 3762 GYCCCCYFGL 3771


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 GAAACVYFGI 10
G C YFG+
Sbjct: 3758 GYCCCCYFGL 3767


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 GAAACVYFGI 10
G AC+Y G+
Sbjct: 1760 GLKACIYVGM 1769


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 GAAACVYFGI 10
G C YFG+
Sbjct: 3770 GYCCCCYFGL 3779


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 GAAACVYFGI 10
G C YFG+
Sbjct: 3764 GYCCCCYFGL 3773


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 3 AACVYFG 9
+ACVY G
Sbjct: 640 SACVYMG 646


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 GAAACVYFGI 10
G AC+Y G+
Sbjct: 1760 GLKACIYVGM 1769


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 GAAACVYFGI 10
G C YFG+
Sbjct: 3758 GYCCCCYFGL 3767


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 GAAACVYFGI 10
G C YFG+
Sbjct: 3770 GYCCCCYFGL 3779


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 GAAACVYFGI 10
G +C+Y+G+
Sbjct: 3474 GFVSCMYYGL 3483


>sp|GM_MUHVK|ENVELOPE glycoprotein M|Murid herpesvirus 1 (strain K181)

Query: 4 ACVYFGI 10
ACVYF I
Sbjct: 254 ACVYFSI 260


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1 GAAACVYFGI 10
G +C+Y+G+
Sbjct: 3474 GFVSCMYYGL 3483


>sp|KCV_PBCV1|POTASSIUM channel protein kcv|Paramecium bursaria Chlorella virus 1

Query: 5 CVYFGI 10
C+YFG+
Sbjct: 53 CIYFGV 58


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 GAAACVYFG 9
G CVY+G
Sbjct: 3518 GYCNCVYYG 3526




24|Sequence|116|125|VYFGIAASLV

>sp|TGB2_FXMV|MOVEMENT protein TGB2|Foxtail mosaic virus

Query: 1 VYFGIAASLV 10
+ GIAASLV
Sbjct: 31 IAIGIAASLV 40




25|Sequence|121|130|AASLVKMGRL

>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 1 AASLVKMG 8
AASLVK+G
Sbjct: 363 AASLVKIG 370


>sp|DPOL_MUHVS|DNA polymerase catalytic subunit|Murid herpesvirus 1 (strain Smith)

Query: 1 AASLVKMGR 9
AAS+ K+GR
Sbjct: 739 AASITKIGR 747


>sp|DPOL_RCMVM|DNA polymerase catalytic subunit|Rat cytomegalovirus (strain

Query: 1 AASLVKMGR 9
AAS+ K+GR
Sbjct: 766 AASITKIGR 774




26|Sequence|126|135|KMGRLEGWEV

>sp|TERM_ADECR|PRETERMINAL protein|Canine adenovirus serotype 1 (strain

Query: 4 RLEGWEV 10
RLEGW +
Sbjct: 16 RLEGWSL 22


>sp|DECO_BP234|DECORATION protein|Thermus virus P23-45 (Thermus thermophilus

Query: 2 MGRLEGWE 9
+GR+E WE
Sbjct: 10 IGRVEYWE 17


>sp|UL97_ELHVK|PHOSPHOTRANSFERASE UL97 homolog|Elephantid herpesvirus 1 (isolate Asian

Query: 4 RLEGWEV 10
++EGWE+
Sbjct: 203 QVEGWEI 209


>sp|CAPSD_PMVK|CAPSID protein|Panicum mosaic virus (strain United

Query: 1 KMGRLEGWE 9
+MG+ +GW+
Sbjct: 49 RMGQGQGWQ 57


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 4 RLEGW 8
RLEGW
Sbjct: 1030 RLEGW 1034




27|Sequence|131|141|EGWEVFAKPKV

>sp|VP48_NPVOP|P48 protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 EGWEVFAKP 9
+GW++F +P
Sbjct: 163 DGWDIFLRP 171


>sp|GB_MUHVS|ENVELOPE glycoprotein B|Murid herpesvirus 1 (strain Smith)

Query: 2 GWEVFAKPKV 11
GWE+F K V
Sbjct: 346 GWEIFPKQNV 355


>sp|LMBD2_REOVJ|OUTER capsid protein lambda-2|Reovirus type 2 (strain D5/Jones)

Query: 1 EGWEVFAKPKV 11
+ WEVF K K+
Sbjct: 80 DAWEVFVKEKL 90


>sp|P48_NPVAC|P48 protein|Autographa californica nuclear polyhedrosis virus

Query: 2 GWEVFAKP 9
GW++F +P
Sbjct: 160 GWDIFLRP 167


>sp|Y618_ATV|STRUCTURAL protein ORF618|Acidianus two-tailed virus (ATV)

Query: 2 GWEVFA 7
GWEVFA
Sbjct: 552 GWEVFA 557


>sp|DNLI_NPVLD|DNA ligase|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 1 EGWEVFAKP 9
E WE F KP
Sbjct: 162 EPWERFQKP 170


>sp|GB_ILTVT|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain Thorne

Query: 3 WEVFAKPKV 11
W +F++P++
Sbjct: 135 WALFSRPQI 143


>sp|GB_ILTVS|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain SA-2)

Query: 3 WEVFAKPKV 11
W +F++P++
Sbjct: 135 WALFSRPQI 143


>sp|GB_ILTV6|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain 632)

Query: 3 WEVFAKPKV 11
W +F++P++
Sbjct: 125 WALFSRPQI 133


>sp|EXO1_BPT5|PROBABLE exonuclease subunit 1|Escherichia phage T5 (Enterobacteria phage

Query: 3 WEVFAKP 9
WEV KP
Sbjct: 109 WEVITKP 115


>sp|ENV_AVISN|ENVELOPE glycoprotein|Avian spleen necrosis virus

Query: 1 EGWEVFAKPKV 11
+ WE KPK+
Sbjct: 91 QQWECVFKPKI 101


>sp|POL_IPHA|INTRACISTERNAL A-particle Pol-related polyprotein|Hamster intracisternal

Query: 1 EGWEVFAKPKV 11
E W + KP++
Sbjct: 650 EAWSAWGKPRI 660


>sp|ENV_AVIRE|ENVELOPE glycoprotein|Avian reticuloendotheliosis virus

Query: 1 EGWEVFAKPKV 11
+ WE KPK+
Sbjct: 91 QQWECVFKPKI 101


>sp|VP4_ROTPC|OUTER capsid protein VP4|Rotavirus C (strain RVC/Pig/United

Query: 2 GWEVFAKP 9
GW ++ KP
Sbjct: 84 GWVIYQKP 91


>sp|END4_BPT4|ENDONUCLEASE IV|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 GWEVFAKPK 10
W+V A PK
Sbjct: 87 AWDVLAHPK 95


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1 EGWEVFAKPKV 11
E WE FAK +
Sbjct: 2062 EYWEEFAKKPI 2072


>sp|L_PARVP|RNA-DIRECTED RNA polymerase L|Parana mammarenavirus (isolate

Query: 5 VFAKPKV 11
VF+KPK+
Sbjct: 1681 VFSKPKI 1687


>sp|TRX1_ALHV1|TRIPLEX capsid protein 1|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 GWEVFA 7
GW VFA
Sbjct: 329 GWRVFA 334


>sp|POL_IPMAI|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 1 EGWEVFAKPKV 11
E W + KP++
Sbjct: 615 EAWSAWGKPRL 625


>sp|POL_SOCMV|ENZYMATIC polyprotein|Soybean chlorotic mottle virus

Query: 3 WEVFAKPK 10
WE+ +PK
Sbjct: 52 WEILKQPK 59


>sp|P7_GLRV3|PROTEIN P7|Grapevine leafroll-associated virus 3 (isolate

Query: 1 EGWEVF 6
+GW+VF
Sbjct: 23 DGWDVF 28


>sp|POL_IPMA|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 1 EGWEVFAKPKV 11
E W + KP++
Sbjct: 697 EAWSAWGKPRL 707


>sp|RDRP_TCV|RNA-DIRECTED RNA polymerase|Turnip crinkle virus (TCV)

Query: 1 EGWEVFAKPKV 11
EGW + P+V
Sbjct: 624 EGWVMVRNPRV 634






THE END