1|SequenceR|10|1|WYQRFVKPAM
>sp|A47_VARV|PROTEIN A47|Variola virus
Query: 1 WYQRFVKP 8
W ++F+KP
Sbjct: 221 WNKKFIKP 228
>sp|A47_VAR67|PROTEIN A47|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 WYQRFVKP 8
W ++F+KP
Sbjct: 221 WNKKFIKP 228
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 1 WYQRFVKPAM 10
WY+R + PA+
Sbjct: 289 WYRRSMSPAV 298
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 WYQRFVKPAM 10
WY+++ P M
Sbjct: 675 WYKKYHVPIM 684
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 1 WYQRFVKPA 9
+ RFV+PA
Sbjct: 331 YVDRFVRPA 339
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 WYQRFVKPAM 10
WY+++ P M
Sbjct: 675 WYRKYHVPIM 684
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 WYQRFVKPAM 10
WY+++ P M
Sbjct: 675 WYRKYHVPIM 684
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 WYQRFVKPAM 10
WY+++ P M
Sbjct: 675 WYKKYHIPIM 684
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 3 QRFVKPAM 10
RFVKP +
Sbjct: 616 HRFVKPCI 623
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 3 QRFVKPAM 10
RFVKP +
Sbjct: 616 HRFVKPCV 623
>sp|UL07_HCMVA|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WYQRFVKP 8
WY VKP
Sbjct: 130 WYNLTVKP 137
>sp|UL07_HCMVM|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WYQRFVKP 8
WY VKP
Sbjct: 130 WYNLTVKP 137
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 WYQRFVKPAM 10
WY ++P M
Sbjct: 1124 WYGMEIRPVM 1133
>sp|UL08_HCMVA|MEMBRANE protein UL8|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WYQRFVKP 8
WY VKP
Sbjct: 130 WYNLTVKP 137
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 YQRFVK 7
YQR++K
Sbjct: 2154 YQRYIK 2159
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 1 WYQRFVKPA 9
+ +FVKPA
Sbjct: 331 YVDQFVKPA 339
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 WYQRFVKPA 9
+ +FVKPA
Sbjct: 331 YVDQFVKPA 339
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 YQRFVKPA 9
Y R VKP+
Sbjct: 654 YYRVVKPS 661
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 WYQRFVKPAM 10
WY ++P M
Sbjct: 1124 WYGMEIRPVM 1133
2|SequenceR|15|6|GDPIDWYQRF
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 GDPIDWYQR 9
G PID++ R
Sbjct: 715 GTPIDYFNR 723
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PIDWYQR 9
PIDW+ +
Sbjct: 461 PIDWFAQ 467
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 1 GDPIDWYQR 9
GD + +YQR
Sbjct: 397 GDSVYYYQR 405
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 1 GDPIDWYQR 9
GD + +YQR
Sbjct: 397 GDSVYYYQR 405
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 1 GDPIDWYQR 9
GD + +YQR
Sbjct: 397 GDSVYYYQR 405
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 1 GDPIDWYQR 9
GD + +YQR
Sbjct: 397 GDSVYYYQR 405
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 IDWYQRF 10
+DW +RF
Sbjct: 1662 MDWVERF 1668
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 4 IDWYQRF 10
+DW +RF
Sbjct: 1662 MDWVERF 1668
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 IDWYQ 8
+DWYQ
Sbjct: 210 MDWYQ 214
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 IDWYQ 8
+DWYQ
Sbjct: 210 MDWYQ 214
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DPIDWYQR 9
DP W+++
Sbjct: 142 DPFSWFRK 149
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 DPIDWYQR 9
DP W+++
Sbjct: 142 DPFSWFRK 149
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DPIDWYQR 9
DP W+++
Sbjct: 142 DPFSWFRK 149
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GDPIDWYQRF 10
G P+D Y F
Sbjct: 6295 GKPVDHYDGF 6304
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 3 PIDWY 7
P+DW+
Sbjct: 890 PLDWF 894
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 DPIDWY 7
DPID++
Sbjct: 1316 DPIDYF 1321
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 DPIDWY 7
DPID++
Sbjct: 1316 DPIDYF 1321
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 1 GDPIDWYQR 9
GD +W QR
Sbjct: 334 GDTPEWIQR 342
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 PIDWYQRF 10
PID Y R
Sbjct: 611 PIDLYSRL 618
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 PIDWYQRF 10
PID Y R
Sbjct: 611 PIDLYSRL 618
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 1 GDPIDW 6
G+PI W
Sbjct: 287 GNPIQW 292
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 1 GDPIDWYQRF 10
GD +W QR
Sbjct: 341 GDTPEWIQRL 350
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 5 DWYQRF 10
DW +RF
Sbjct: 1663 DWIERF 1668
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DPIDW 6
DPI+W
Sbjct: 246 DPINW 250
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 1 GDPIDWYQRF 10
GD +W QR
Sbjct: 327 GDTPEWIQRL 336
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 1 GDPIDWYQRF 10
GD +W QR
Sbjct: 331 GDTPEWIQRL 340
>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus
Query: 3 PIDWYQRF 10
PI+W Q F
Sbjct: 209 PINWAQGF 216
>sp|UNG_MONPV|URACIL-DNA glycosylase|Monkeypox virus (MPXV)
Query: 3 PIDWYQRF 10
PI+W Q F
Sbjct: 209 PINWAQGF 216
>sp|UNG_VACCC|URACIL-DNA glycosylase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PIDWYQRF 10
PI+W Q F
Sbjct: 209 PINWAQGF 216
>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PIDWYQRF 10
PI+W Q F
Sbjct: 209 PINWAQGF 216
>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)
Query: 2 DPIDW 6
DPI+W
Sbjct: 246 DPINW 250
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 PIDWYQRF 10
PI+W Q F
Sbjct: 209 PINWAQGF 216
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 DPIDW 6
+P+DW
Sbjct: 1024 NPVDW 1028
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 1 GDPIDWYQR 9
GD +W QR
Sbjct: 328 GDTPEWIQR 336
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 DPIDWYQRF 10
+ +D+YQ F
Sbjct: 443 NAVDYYQSF 451
>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain
Query: 1 GDPIDWYQR 9
G+P+ +Y R
Sbjct: 107 GNPVTFYPR 115
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 2 DPIDWYQ 8
DPI W Q
Sbjct: 539 DPIAWLQ 545
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 2 DPIDWYQ 8
DPI W Q
Sbjct: 539 DPIAWLQ 545
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 1 GDPIDWYQR 9
G+P+ +Y R
Sbjct: 107 GNPVTFYPR 115
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 2 DPIDWYQRF 10
D I WY R
Sbjct: 336 DKIIWYDRL 344
>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 1 GDPIDWYQR 9
G+P+ +Y R
Sbjct: 107 GNPVTFYPR 115
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 3 PIDWYQ 8
PID YQ
Sbjct: 439 PIDMYQ 444
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 3 PIDWYQ 8
P DW++
Sbjct: 45 PTDWFR 50
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 5 DWYQRF 10
D+YQR+
Sbjct: 1122 DFYQRY 1127
>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related
Query: 2 DPIDWYQR 9
DP WY R
Sbjct: 63 DPNMWYLR 70
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 3 PIDW 6
PIDW
Sbjct: 627 PIDW 630
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 GDPIDWYQ 8
GDP+ W +
Sbjct: 966 GDPMFWME 973
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 2 DPIDWYQ 8
DP W++
Sbjct: 965 DPFGWFK 971
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 5 DWYQR 9
DWY++
Sbjct: 986 DWYEK 990
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 GDPIDWYQRF 10
G P W Q+
Sbjct: 170 GSPYSWEQKL 179
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 GDPIDWY 7
G P WY
Sbjct: 988 GRPTKWY 994
>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PIDWY 7
P DWY
Sbjct: 408 PSDWY 412
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 3 PIDW 6
PIDW
Sbjct: 329 PIDW 332
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 1 GDPIDWYQR 9
G P+D Y R
Sbjct: 691 GVPVDLYPR 699
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 3 PIDWYQRF 10
PI W+ R+
Sbjct: 524 PISWFVRW 531
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 GDPIDWY 7
G P WY
Sbjct: 987 GRPAKWY 993
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 GDPIDWY 7
G P WY
Sbjct: 987 GRPAKWY 993
3|SequenceR|20|11|RHCDTGDPID
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 RHCDT 5
RHCDT
Sbjct: 1450 RHCDT 1454
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 RHCDTG 6
R CDTG
Sbjct: 953 RECDTG 958
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 HCDTGD 7
HC +GD
Sbjct: 1189 HCSSGD 1194
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 HCDTGD 7
HC +GD
Sbjct: 1189 HCSSGD 1194
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 HCDTGD 7
HC +GD
Sbjct: 1189 HCSSGD 1194
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 5 TGDPID 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 5 TGDPID 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 5 TGDPID 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 5 TGDPID 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 5 TGDPID 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 5 TGDPID 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 5 TGDPID 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 RHCDTGDP 8
R C TG P
Sbjct: 768 RWCPTGTP 775
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 5 TGDPID 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 5 TGDPID 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 RHCDTGDP 8
R CDT P
Sbjct: 134 RACDTSIP 141
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RHCDTGDP 8
R CDT P
Sbjct: 134 RACDTSIP 141
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 RHCDTG 6
+ CDTG
Sbjct: 953 KECDTG 958
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 RHCDTGDP 8
R C TG P
Sbjct: 768 RWCPTGTP 775
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 1 RHCDTGDP 8
R CDT P
Sbjct: 134 RACDTSIP 141
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 1 RHCDTGDP 8
R CDT P
Sbjct: 134 RACDTSIP 141
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 RHCDTGDP 8
R CDT P
Sbjct: 134 RACDTSIP 141
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 1 RHCDTGDP 8
R CDT P
Sbjct: 134 RACDTSIP 141
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 HCDTGD 7
HC+ GD
Sbjct: 945 HCEPGD 950
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 HCDTGDPID 10
HC+ +P++
Sbjct: 1823 HCEMREPVE 1831
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 RHCDTGDPID 10
RH TG+ ++
Sbjct: 294 RHTSTGNAVE 303
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 RHCDTGDPID 10
RH TG+ ++
Sbjct: 294 RHTSTGNAVE 303
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 2 HCDTGDPI 9
H DTG+ +
Sbjct: 188 HTDTGEAV 195
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 2 HCDTGDPI 9
H DTG+ +
Sbjct: 188 HTDTGEAV 195
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 4 DTGDPI 9
D+GDP+
Sbjct: 21 DSGDPL 26
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 RHCDTGDPI 9
R+C DP+
Sbjct: 1550 RYCILNDPL 1558
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 5 TGDPI 9
TGDPI
Sbjct: 32 TGDPI 36
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 5 TGDPID 10
TG P+D
Sbjct: 2090 TGSPVD 2095
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 RHCDTGDPI 9
R+ +TG+P+
Sbjct: 229 RNEETGEPV 237
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 3 CDTGD 7
C+TGD
Sbjct: 154 CETGD 158
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 2 HCDTGD 7
HC T D
Sbjct: 252 HCGTSD 257
4|SequenceR|25|16|TSYAKRHCDT
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 6 RHCDT 10
RHCDT
Sbjct: 1450 RHCDT 1454
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 TSYAKRHCD 9
+ YA R CD
Sbjct: 126 SDYAPRPCD 134
>sp|CORE5_ADE05|CORE-CAPSID bridging protein|Human adenovirus C serotype 5
Query: 2 SYAKRHCD 9
+Y KRH D
Sbjct: 118 AYGKRHKD 125
>sp|CORE5_ADE02|CORE-CAPSID bridging protein|Human adenovirus C serotype 2
Query: 2 SYAKRHCD 9
+Y KRH D
Sbjct: 119 AYGKRHKD 126
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 YAKRHCD 9
YA R CD
Sbjct: 128 YAPRPCD 134
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSYAKRHCDT 10
TSY HC++
Sbjct: 190 TSYRLIHCNS 199
>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus
Query: 2 SYAKRHCDT 10
+YA R CD+
Sbjct: 51 TYASRLCDS 59
>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate
Query: 2 SYAKRHCDT 10
+YA R CD+
Sbjct: 51 TYASRLCDS 59
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 2 SYAKRHCDT 10
+YA R CD+
Sbjct: 51 TYASRLCDS 59
>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /
Query: 2 SYAKRHCDT 10
+YA R CD+
Sbjct: 51 TYASRLCDS 59
>sp|C22L_VACCC|TRUNCATED CrmB protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SYAKRHCDT 10
+YA R CD+
Sbjct: 46 TYASRLCDS 54
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSYAKRHCD 9
TSY HC+
Sbjct: 187 TSYRLIHCN 195
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 6 RHCD 9
RHCD
Sbjct: 502 RHCD 505
Query: 1 TSYAKRHCD 9
TSY+ CD
Sbjct: 727 TSYSVSSCD 735
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSYAKRHCDT 10
T Y HC+T
Sbjct: 189 TRYRLIHCNT 198
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 RHCDT 10
RHC+T
Sbjct: 203 RHCNT 207
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 6 RHCD 9
RHCD
Sbjct: 502 RHCD 505
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 RHCDT 10
RHC+T
Sbjct: 192 RHCNT 196
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSYAKRHCDT 10
TSY C+T
Sbjct: 189 TSYTLTSCNT 198
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSYAKRHCDT 10
TSY C+T
Sbjct: 189 TSYTLTSCNT 198
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSYAKRHCDT 10
TSY C+T
Sbjct: 194 TSYTLTSCNT 203
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSYAKRHCDT 10
TSY C+T
Sbjct: 189 TSYTLTSCNT 198
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSYAKRHCDT 10
TSY C+T
Sbjct: 189 TSYTLTSCNT 198
>sp|UL59_HCMVA|UNCHARACTERIZED protein UL59|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 RHCDT 10
RHCD
Sbjct: 19 RHCDV 23
5|SequenceR|30|21|SAISTTSYAK
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 2 AISTTSYA 9
A+STTS++
Sbjct: 128 ALSTTSFS 135
6|SequenceR|35|26|TLGAVSAIST
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 TLGAVSAIST 10
T+G VS +ST
Sbjct: 4594 TVGGVSLLST 4603
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 TLGAVS 6
TLGAVS
Sbjct: 2744 TLGAVS 2749
7|SequenceR|40|31|RYAAATLGAV
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 RYAAATLGAV 10
RY TLGAV
Sbjct: 2739 RYGLITLGAV 2748
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 YAAATLGA 9
YAAA LGA
Sbjct: 2188 YAAAFLGA 2195
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YAAATLGA 9
YAAA LGA
Sbjct: 2215 YAAAFLGA 2222
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 YAAATLGA 9
YAAA LGA
Sbjct: 2193 YAAAFLGA 2200
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 3 AAATLGAV 10
AAA LGAV
Sbjct: 4 AAARLGAV 11
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 3 AAATLGAV 10
AAA LGAV
Sbjct: 4 AAARLGAV 11
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 3 AAATLGAV 10
AAA LGAV
Sbjct: 4 AAARLGAV 11
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 3 AAATLGAV 10
AAA LGAV
Sbjct: 4 AAARLGAV 11
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 3 AAATLGAV 10
AAA LGAV
Sbjct: 4 AAARLGAV 11
8|SequenceR|45|36|PNLTVRYAAA
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PNLTVRYA 8
PNL RYA
Sbjct: 414 PNLLARYA 421
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PNLTVRYA 8
PNL RYA
Sbjct: 414 PNLLARYA 421
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PNLTVRYA 8
PNL RYA
Sbjct: 414 PNLLARYA 421
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 PNLTVRYA 8
PNL RYA
Sbjct: 2536 PNLVERYA 2543
>sp|SH_MUMPK|SMALL hydrophobic protein|Mumps virus (strain Kilham) (MuV)
Query: 4 TVRYAA 9
TVRYAA
Sbjct: 37 TVRYAA 42
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 PNLTVRYAAA 10
PNL Y AA
Sbjct: 344 PNLIKLYGAA 353
9|SequenceR|50|41|LFTGPPNLTV
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 LFTGPPN 7
LF GPPN
Sbjct: 429 LFYGPPN 435
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 LFTGPPN 7
LF GPPN
Sbjct: 430 LFHGPPN 436
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 LFTGPPNLTV 10
LF PPN+T+
Sbjct: 545 LFPSPPNVTL 554
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 TGPPNL 8
TGPPNL
Sbjct: 92 TGPPNL 97
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 FTGPPNLTV 10
F+G PNLT+
Sbjct: 701 FSGLPNLTL 709
Query: 1 LFTGPPNL 8
LF GPP
Sbjct: 1441 LFQGPPTF 1448
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 FTGPPNLT 9
+TGPP ++
Sbjct: 24 YTGPPPMS 31
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 FTGPPNLT 9
+TGPP ++
Sbjct: 24 YTGPPPMS 31
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 2 FTGPPNLT 9
+TGPP ++
Sbjct: 24 YTGPPPMS 31
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 TGPPNLTV 10
TGP N+T+
Sbjct: 410 TGPENITL 417
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 LFTGPPNLT 9
LF G PN T
Sbjct: 1871 LFNGNPNST 1879
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 PPNLTV 10
PPN+T+
Sbjct: 125 PPNITI 130
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1445 LFQGPP 1450
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1433 LFQGPP 1438
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1425 LFQGPP 1430
>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GPPNLT 9
GPPNLT
Sbjct: 309 GPPNLT 314
>sp|LMP1_EBVA8|LATENT membrane protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GPPNLT 9
GPPNLT
Sbjct: 314 GPPNLT 319
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1425 LFQGPP 1430
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1435 LFQGPP 1440
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 LFTGPPN 7
L GPPN
Sbjct: 431 LIYGPPN 437
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 LFTGPPN 7
L GPPN
Sbjct: 432 LIYGPPN 438
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 LFTGPPN 7
L GPPN
Sbjct: 428 LIYGPPN 434
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 LFTGPPN 7
L GPPN
Sbjct: 429 LIYGPPN 435
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 LFTGPPN 7
L GPPN
Sbjct: 430 LIYGPPN 436
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 LFTGPPN 7
L GPPN
Sbjct: 429 LIYGPPN 435
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 LFTGPPN 7
L GPPN
Sbjct: 428 LIYGPPN 434
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 LFTGPPN 7
L GPPN
Sbjct: 431 LIYGPPN 437
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 LFTGPPN 7
L GPPN
Sbjct: 429 LIHGPPN 435
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 LFTGPPN 7
L GPPN
Sbjct: 429 LIHGPPN 435
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 LFTGPPN 7
L GPPN
Sbjct: 430 LIHGPPN 436
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1429 LFQGPP 1434
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 4 GPPNLT 9
GPPNLT
Sbjct: 347 GPPNLT 352
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1443 LFQGPP 1448
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1436 LFQGPP 1441
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1435 LFQGPP 1440
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1438 LFQGPP 1443
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1426 LFQGPP 1431
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1424 LFQGPP 1429
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1437 LFQGPP 1442
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 LFTGPPNL 8
LF GPP
Sbjct: 1438 LFQGPPKF 1445
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1426 LFQGPP 1431
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1427 LFQGPP 1432
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 LFTGPPNL 8
LF GPP
Sbjct: 1438 LFQGPPKF 1445
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 LFTGPPNL 8
LF GPP
Sbjct: 1438 LFQGPPKF 1445
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 LFTGPPN 7
L GPPN
Sbjct: 437 LIFGPPN 443
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1427 LFQGPP 1432
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 1427 LFQGPP 1432
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LFTGPPNLTV 10
L+ GP +LT+
Sbjct: 627 LYRGPLDLTI 636
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LFTGPPNLTV 10
L+ GP +LT+
Sbjct: 628 LYRGPLDLTI 637
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LFTGPPNLTV 10
L+ GP +LT+
Sbjct: 627 LYRGPLDLTI 636
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LFTGPPNLTV 10
L+ GP +LT+
Sbjct: 627 LYRGPLDLTI 636
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LFTGPPNLTV 10
L+ GP +LT+
Sbjct: 627 LYRGPLDLTI 636
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LFTGPPNLTV 10
L+ GP +LT+
Sbjct: 627 LYRGPLDLTI 636
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LFTGPPNLTV 10
L+ GP +LT+
Sbjct: 627 LYRGPLDLTI 636
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LFTGPPNLTV 10
L+ GP +LT+
Sbjct: 627 LYRGPLDLTI 636
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LFTGPPNLTV 10
L+ GP +LT+
Sbjct: 627 LYRGPLDLTI 636
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 LFTGPPNL 8
LF GPP
Sbjct: 1438 LFQGPPKF 1445
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LFTGPPNLTV 10
L+ GP +LT+
Sbjct: 621 LYRGPLDLTI 630
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 4 GPPNL 8
GPPNL
Sbjct: 2423 GPPNL 2427
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 4 GPPNL 8
GPPNL
Sbjct: 2423 GPPNL 2427
>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LFTGPPN 7
L+T PPN
Sbjct: 218 LYTTPPN 224
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 LFTGPPNLT 9
LF+GP +T
Sbjct: 2281 LFSGPSAVT 2289
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 4 GPPNLTV 10
GP NLTV
Sbjct: 13 GPYNLTV 19
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 4 GPPNLTV 10
GP NLTV
Sbjct: 13 GPYNLTV 19
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 GPPNLTV 10
GP NLTV
Sbjct: 13 GPYNLTV 19
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 GPPNLTV 10
GP NLTV
Sbjct: 13 GPYNLTV 19
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 LFTGPP 6
LF GPP
Sbjct: 62 LFLGPP 67
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 4 GPPNLTV 10
GP NLTV
Sbjct: 13 GPYNLTV 19
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 4 GPPNLTV 10
GP NLTV
Sbjct: 13 GPYNLTV 19
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 4 GPPNLTV 10
GP NLTV
Sbjct: 13 GPYNLTV 19
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 4 GPPNLTV 10
GP NLTV
Sbjct: 13 GPYNLTV 19
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 4 GPPNLTV 10
GP NLTV
Sbjct: 13 GPYNLTV 19
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 1 LFTGPP 6
+ TGPP
Sbjct: 77 IITGPP 82
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 1 LFTGPP 6
+ TGPP
Sbjct: 77 IITGPP 82
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LFTGPPNLTV 10
L+ GP +LT+
Sbjct: 606 LYRGPLDLTI 615
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 LFTGPPN 7
LF G PN
Sbjct: 62 LFAGVPN 68
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 FTGPPNLTV 10
F GP N T+
Sbjct: 2061 FDGPANNTI 2069
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LFTGPPNLTV 10
L+ GP +LT+
Sbjct: 627 LYRGPLDLTI 636
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LFTGPPNLT 9
+F G PN++
Sbjct: 1067 MFIGTPNVS 1075
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LFTGPPNLT 9
+F G PN++
Sbjct: 1067 MFIGTPNVS 1075
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LFTGPPNLT 9
+F G PN++
Sbjct: 1067 MFIGTPNVS 1075
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 4 GPPNLT 9
GPP+LT
Sbjct: 660 GPPDLT 665
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 FTGPPNL 8
TG PNL
Sbjct: 139 LTGKPNL 145
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 FTGPPNL 8
TG PNL
Sbjct: 139 LTGKPNL 145
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LFTGPPNLTV 10
L+ GP +LT+
Sbjct: 131 LYRGPLDLTI 140
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 FTGPPNL 8
TG PNL
Sbjct: 139 LTGKPNL 145
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 GPPNLT 9
GPP+LT
Sbjct: 641 GPPDLT 646
10|SequenceR|55|46|KAVGELFTGP
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 KAVGELFTGP 10
+ +G+LF+GP
Sbjct: 2276 RDLGKLFSGP 2285
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KAVG + GP
Sbjct: 568 KAVGTVLVGP 577
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KAVG + GP
Sbjct: 562 KAVGTVLVGP 571
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 556 KAIGTILVGP 565
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 563 KAIGTILVGP 572
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KAVG + GP
Sbjct: 568 KAVGTVLVGP 577
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 554 KAIGTVLVGP 563
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 559 KAIGTVLVGP 568
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 558 KAIGTVLVGP 567
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 552 KAIGTVLVGP 561
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 558 KAIGTVLVGP 567
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 558 KAIGTVLVGP 567
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 558 KAIGTVLVGP 567
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 570 KAIGTVLVGP 579
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 553 KAIGTVLVGP 562
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 570 KAIGTVLVGP 579
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 560 KAIGTVLVGP 569
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 558 KAIGTVLVGP 567
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 557 KAIGTVLVGP 566
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 570 KAIGTVLVGP 579
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 558 KAIGTVLVGP 567
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 553 KAIGTVLVGP 562
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 559 KAIGTVLVGP 568
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 559 KAIGTVLVGP 568
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 564 KAIGTVLVGP 573
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 557 KAIGTVLVGP 566
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 562 KAIGTVLVGP 571
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 553 KAIGTVLVGP 562
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 558 KAIGTVLVGP 567
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 555 KAIGTVLIGP 564
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 555 KAIGTVLIGP 564
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
KA+G + GP
Sbjct: 555 KAMGTVLVGP 564
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 3 VGELFTGP 10
VG+ F+GP
Sbjct: 455 VGKRFSGP 462
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAVGELFTGP 10
+A+G + GP
Sbjct: 553 RAIGTVLVGP 562
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 GELFTGP 10
GE++T P
Sbjct: 74 GEVYTSP 80
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 1 KAVGELFTGP 10
K+ G+L GP
Sbjct: 159 KSPGKLVAGP 168
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 AVGELFTG 9
A+G LF G
Sbjct: 515 AIGALFLG 522
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 1 KAVGELFTGP 10
K+ G+L GP
Sbjct: 159 KSPGKLVAGP 168
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 3 VGELFT 8
VG+LFT
Sbjct: 171 VGQLFT 176
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 3 VGELFT 8
VG+LFT
Sbjct: 159 VGQLFT 164
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 3 VGELFT 8
VG+LFT
Sbjct: 171 VGQLFT 176
11|SequenceR|60|51|TYQGVKAVGE
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 1 TYQGVKAVGE 10
TY G+KA G+
Sbjct: 401 TYSGIKANGQ 410
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 1 TYQGVKAVG 9
TYQG+K+ G
Sbjct: 318 TYQGIKSNG 326
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 YQGVKAVG 9
YQ V+AVG
Sbjct: 1869 YQAVQAVG 1876
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 YQGVKAVG 9
YQ V+AVG
Sbjct: 1869 YQAVQAVG 1876
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 YQGVKAVG 9
YQ V+AVG
Sbjct: 1869 YQAVQAVG 1876
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 1 TYQGVK 6
TYQGVK
Sbjct: 408 TYQGVK 413
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 TYQGVKAVG 9
TYQ +KA G
Sbjct: 437 TYQAIKANG 445
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 1 TYQGVK 6
TYQGVK
Sbjct: 413 TYQGVK 418
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 TYQGVKA 7
TYQG+K+
Sbjct: 414 TYQGIKS 420
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 1 TYQGVK 6
TYQGVK
Sbjct: 307 TYQGVK 312
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 TYQGVK 6
TYQG+K
Sbjct: 418 TYQGIK 423
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 1 TYQGVKAVGE 10
TY GV+ GE
Sbjct: 134 TYTGVRTNGE 143
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 1 TYQGVKAVGE 10
TY GV+ GE
Sbjct: 134 TYTGVRTNGE 143
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 1 TYQGVKAVGE 10
TY GV+ GE
Sbjct: 134 TYTGVRTNGE 143
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 1 TYQGVKAVGE 10
TY GV+ GE
Sbjct: 134 TYTGVRTNGE 143
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 1 TYQGVKAVGE 10
TY GV+ GE
Sbjct: 134 TYTGVRTNGE 143
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 1 TYQGVKAVGE 10
TY GV+ GE
Sbjct: 134 TYTGVRTNGE 143
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 1 TYQGVKAVGE 10
TY GV+ GE
Sbjct: 134 TYTGVRTNGE 143
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 1 TYQGVKAVGE 10
TY GV+ GE
Sbjct: 134 TYTGVRTNGE 143
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 1 TYQGVKAVGE 10
TY GV+ GE
Sbjct: 134 TYTGVRTNGE 143
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 1 TYQGVKAVGE 10
TY GV+ GE
Sbjct: 134 TYTGVRTNGE 143
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 YQGVKAVG 9
YQ ++AVG
Sbjct: 1868 YQALQAVG 1875
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 YQGVKAVG 9
YQ ++AVG
Sbjct: 1868 YQALQAVG 1875
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 1 TYQGVK 6
+YQGVK
Sbjct: 398 SYQGVK 403
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 1 TYQGVK 6
TY+GVK
Sbjct: 127 TYKGVK 132
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 TYQGVK 6
TY+GVK
Sbjct: 127 TYKGVK 132
>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TYQGVK 6
TY+GVK
Sbjct: 127 TYKGVK 132
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 YQGVKAVG 9
YQ ++A+G
Sbjct: 1868 YQALQAIG 1875
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 2 YQGVKA 7
YQG+K+
Sbjct: 56 YQGIKS 61
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 1 TYQGVK 6
TYQGV+
Sbjct: 342 TYQGVE 347
12|SequenceR|65|56|AAATFTYQGV
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 AAATFTYQG 9
AAA F Y+G
Sbjct: 270 AAALFWYKG 278
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 AAATFTYQG 9
AAA F Y+G
Sbjct: 272 AAALFWYKG 280
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 AAATFTYQG 9
AAA F Y+G
Sbjct: 271 AAALFWYKG 279
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 AAATFTYQG 9
AAA F Y+G
Sbjct: 270 AAALFWYKG 278
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 AAATFTYQG 9
AAA F Y+G
Sbjct: 270 AAALFWYKG 278
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 AAATFTYQG 9
AAA F Y+G
Sbjct: 269 AAALFWYKG 277
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 AAATFTYQG 9
AAA F Y+G
Sbjct: 271 AAALFWYKG 279
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 AAATFTYQG 9
AAA F Y+G
Sbjct: 270 AAALFWYKG 278
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 AAATFTYQG 9
AAA F Y+G
Sbjct: 271 AAALFWYKG 279
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 AAATFTYQG 9
AAA F Y+G
Sbjct: 270 AAALFWYKG 278
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 AAATFTYQG 9
AAA F Y+G
Sbjct: 272 AAALFWYKG 280
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 AAATFTYQG 9
AAA F Y+G
Sbjct: 269 AAALFWYKG 277
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 1 AAATFTYQGV 10
A ATF+ QG+
Sbjct: 665 AGATFSCQGL 674
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 4 TFTYQG 9
T+TYQG
Sbjct: 147 TYTYQG 152
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 4 TFTYQG 9
T+TYQG
Sbjct: 147 TYTYQG 152
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 1 AAATFTYQGV 10
+AAT TY G+
Sbjct: 396 SAATDTYSGI 405
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 178 ATASFIYDG 186
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 1 AAATFTYQG 9
A A+F Y G
Sbjct: 201 ATASFIYDG 209
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 AATFTYQGV 10
+ TF Y GV
Sbjct: 19 STTFPYTGV 27
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 AATFTYQGV 10
+ TF Y GV
Sbjct: 19 STTFPYTGV 27
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 AATFTYQGV 10
+ TF Y GV
Sbjct: 19 STTFPYTGV 27
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 AATFTYQGV 10
+ TF Y GV
Sbjct: 19 STTFPYTGV 27
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 TFTYQGV 10
TFT++G+
Sbjct: 717 TFTHEGI 723
>sp|PG095_VARV|ENTRY-FUSION complex associated protein OPG095|Variola virus
Query: 1 AAATFTYQGV 10
+AAT TY G+
Sbjct: 70 SAATETYSGL 79
>sp|PG095_VAR67|ENTRY-FUSION complex associated protein OPG095|Variola virus (isolate
Query: 1 AAATFTYQGV 10
+AAT TY G+
Sbjct: 70 SAATETYSGL 79
>sp|PG095_MONPV|ENTRY-FUSION complex associated protein OPG095|Monkeypox virus (MPXV)
Query: 1 AAATFTYQGV 10
+AAT TY G+
Sbjct: 70 SAATETYSGL 79
>sp|PG095_VACCC|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain
Query: 1 AAATFTYQGV 10
+AAT TY G+
Sbjct: 70 SAATETYSGL 79
>sp|PG095_VACCA|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain Ankara)
Query: 1 AAATFTYQGV 10
+AAT TY G+
Sbjct: 70 SAATETYSGL 79
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 4 TFTYQGV 10
T TYQG+
Sbjct: 68 TITYQGL 74
13|SequenceR|70|61|FVAGVAAATF
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 VAGVAAAT 9
VAG AAAT
Sbjct: 388 VAGSAAAT 395
>sp|US34_HCMVA|PROTEIN US34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GVAAATF 10
GVA ATF
Sbjct: 130 GVANATF 136
14|SequenceR|75|66|CTTLGFVAGV
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 4 LGFVAGV 10
+GFVAGV
Sbjct: 1108 MGFVAGV 1114
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CTTLGFVAG 9
CT+ GF G
Sbjct: 229 CTSYGFFPG 237
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CTTLGFVAG 9
CT+ GF G
Sbjct: 229 CTSYGFFPG 237
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 4 LGFVAGV 10
LGF+AG+
Sbjct: 1218 LGFIAGL 1224
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 4 LGFVAGV 10
LGF+AG+
Sbjct: 1301 LGFIAGL 1307
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 4 LGFVAGV 10
LGF+AG+
Sbjct: 1200 LGFIAGL 1206
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 CTTLGFVA 8
C TL F+A
Sbjct: 791 CKTLAFLA 798
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 CTTLGFVA 8
C TL F+A
Sbjct: 791 CKTLAFLA 798
>sp|PG191_VACCC|PROTEIN OPG191|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TTLGFVAG 9
TT+G +AG
Sbjct: 151 TTIGTIAG 158
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 3 TLGFVAGV 10
LGF AGV
Sbjct: 394 ALGFAAGV 401
15|SequenceR|80|71|VHASICTTLG
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VHASICTTL 9
VH SIC L
Sbjct: 167 VHESICARL 175
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VHASICTTL 9
VH SIC L
Sbjct: 168 VHESICARL 176
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VHASICTTL 9
VH SIC L
Sbjct: 168 VHESICARL 176
>sp|US10_HHV2H|VIRION protein US10|Human herpesvirus 2 (strain HG52)
Query: 2 HASICTTLG 10
HAS C+ G
Sbjct: 263 HASTCSYAG 271
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 2 HASICTTL 9
H+S+ TTL
Sbjct: 304 HSSLSTTL 311
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 ASICTTLG 10
SIC T+G
Sbjct: 11 GSICMTIG 18
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 2 HASICTTLG 10
HAS C+ G
Sbjct: 279 HASTCSYAG 287
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 2 HASICTTLG 10
HAS C+ G
Sbjct: 270 HASTCSYAG 278
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 HASICTTL 9
HA IC L
Sbjct: 270 HAKICQLL 277
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 HASICTTL 9
HA IC L
Sbjct: 270 HAKICQLL 277
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 HASICTTL 9
HA IC L
Sbjct: 270 HAKICQLL 277
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 ASICTTL 9
+++CTTL
Sbjct: 986 STLCTTL 992
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 3 ASICTTLG 10
SIC T+G
Sbjct: 11 GSICMTIG 18
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 HASICTT 8
HA++C T
Sbjct: 1128 HAALCRT 1134
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 HASICTT 8
HA++C T
Sbjct: 1128 HAALCRT 1134
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 HASICTT 8
HA++C T
Sbjct: 1128 HAALCRT 1134
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 1 VHASICT 7
VH S CT
Sbjct: 37 VHGSACT 43
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 HASICTT 8
HA++C T
Sbjct: 1128 HAALCRT 1134
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 HASICTT 8
HA++C T
Sbjct: 1128 HAALCRT 1134
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 HASICTT 8
HA++C T
Sbjct: 1128 HAALCRT 1134
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 6 CTTLG 10
CTT+G
Sbjct: 194 CTTMG 198
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 6 CTTLG 10
CTT+G
Sbjct: 194 CTTMG 198
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 HASICTT 8
HA++C T
Sbjct: 1128 HAALCRT 1134
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 VHASICTT 8
VH S+C +
Sbjct: 1716 VHRSLCAS 1723
16|SequenceR|85|76|DPKERVHASI
>sp|VPX_HV2BE|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 DPKERV 6
DP+ERV
Sbjct: 3 DPRERV 8
>sp|VPX_HV2EH|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 DPKERV 6
DP+ERV
Sbjct: 2 DPRERV 7
>sp|VPX_HV2UC|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 DPKERV 6
DP+ERV
Sbjct: 2 DPRERV 7
>sp|VPX_HV2D1|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 DPKERV 6
DP+ERV
Sbjct: 3 DPRERV 8
>sp|VPX_HV2D2|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 DPKERV 6
DP+ERV
Sbjct: 2 DPRERV 7
>sp|VPX_HV2G1|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 DPKERV 6
DP+ERV
Sbjct: 3 DPRERV 8
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DPKERVHASI 10
DP ERV I
Sbjct: 176 DPSERVFKKI 185
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 DPKERVHASI 10
DP ERV I
Sbjct: 150 DPSERVFKKI 159
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PKERVHA 8
P ER+HA
Sbjct: 176 PPERLHA 182
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 1 DPKERVHASI 10
DP ERV I
Sbjct: 146 DPSERVFKKI 155
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PKERVHA 8
P ER+HA
Sbjct: 176 PPERLHA 182
>sp|A28_YLDV|ENVELOPE protein A28 homolog|Yaba-like disease virus (YLDV)
Query: 1 DPKERVH 7
DP + VH
Sbjct: 60 DPNDHVH 66
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 KERVHASI 10
K+RVH S+
Sbjct: 1452 KDRVHQSL 1459
17|SequenceR|90|81|YNLPDDPKER
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 NLPDDPKER 10
N+P++PK R
Sbjct: 331 NVPENPKTR 339
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 YNLPDDPK 8
Y+LP DPK
Sbjct: 1268 YSLPPDPK 1275
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 YNLPDDPK 8
Y+LP DPK
Sbjct: 1251 YSLPPDPK 1258
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 YNLPDDPK 8
Y+LP DPK
Sbjct: 1255 YSLPPDPK 1262
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 YNLPDDPK 8
Y+LP DPK
Sbjct: 1242 YSLPPDPK 1249
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 YNLPDDPK 8
Y+LP DPK
Sbjct: 1238 YSLPPDPK 1245
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 YNLPDDPK 8
Y+LP DPK
Sbjct: 1235 YSLPPDPK 1242
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 YNLPDDPK 8
Y+LP DPK
Sbjct: 1254 YSLPPDPK 1261
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 YNLPDDPK 8
Y+LP DPK
Sbjct: 1242 YSLPPDPK 1249
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 YNLPDDPK 8
Y+LP DPK
Sbjct: 1238 YSLPPDPK 1245
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 2 NLPDDPKER 10
N+P+ PK+R
Sbjct: 331 NVPEIPKKR 339
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 2 NLPDDPKER 10
N+P+ PK+R
Sbjct: 331 NVPEIPKKR 339
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 NLPDDPKER 10
N+P+ PK+R
Sbjct: 331 NVPELPKKR 339
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1253 YSLPPDP 1259
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1254 YSLPPDP 1260
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1254 YSLPPDP 1260
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1255 YSLPPDP 1261
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1263 YSLPPDP 1269
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1255 YSLPPDP 1261
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1253 YSLPPDP 1259
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 YNLPDD 6
Y LPDD
Sbjct: 423 YKLPDD 428
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 YNLPDD 6
Y LPDD
Sbjct: 410 YKLPDD 415
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1263 YSLPPDP 1269
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1261 YSLPPDP 1267
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1273 YSLPPDP 1279
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1255 YSLPPDP 1261
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1264 YSLPPDP 1270
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1257 YSLPPDP 1263
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 YNLPDDPK 8
YN+ DPK
Sbjct: 104 YNIERDPK 111
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1266 YSLPPDP 1272
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1252 YSLPPDP 1258
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1271 YSLPPDP 1277
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1266 YSLPPDP 1272
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1266 YSLPPDP 1272
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1266 YSLPPDP 1272
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1266 YSLPPDP 1272
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 LPDDPK 8
+P+DPK
Sbjct: 805 IPEDPK 810
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 YNLPDDPK 8
YN+ DPK
Sbjct: 104 YNIERDPK 111
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNLPDDPKER 10
YNL DP E+
Sbjct: 1037 YNLVKDPLEK 1046
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 1 YNLPDDPK 8
YN+ DPK
Sbjct: 104 YNIERDPK 111
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1280 YSLPPDP 1286
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1280 YSLPPDP 1286
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1287 YSLPPDP 1293
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1279 YSLPPDP 1285
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1282 YSLPPDP 1288
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1282 YSLPPDP 1288
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1279 YSLPPDP 1285
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 YNLPDDP 7
Y+LP DP
Sbjct: 1266 YSLPPDP 1272
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 YNLPDDP 7
Y LP DP
Sbjct: 1265 YTLPPDP 1271
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 3 LPDDP 7
LPDDP
Sbjct: 198 LPDDP 202
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 3 LPDDPK 8
LP DPK
Sbjct: 1311 LPGDPK 1316
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NLPDDPK 8
NLP PK
Sbjct: 232 NLPSPPK 238
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NLPDDPK 8
NLP PK
Sbjct: 232 NLPSPPK 238
>sp|VE6_HPV45|PROTEIN E6|Human papillomavirus 45
Query: 5 DDPKER 10
DDPK+R
Sbjct: 5 DDPKQR 10
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 1 YNLPDDPKE 9
+NLP DP++
Sbjct: 207 HNLPIDPQD 215
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNLPDDPKE 9
YNL DP E
Sbjct: 1036 YNLVKDPLE 1044
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 4 PDDPKER 10
P DP ER
Sbjct: 433 PRDPTER 439
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 4 PDDPKER 10
P DP ER
Sbjct: 433 PRDPTER 439
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 4 PDDPKER 10
P DPKE+
Sbjct: 1450 PADPKEK 1456
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 4 PDDPKER 10
P DPKE+
Sbjct: 1450 PADPKEK 1456
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 4 PDDPKER 10
P DPKE+
Sbjct: 1450 PADPKEK 1456
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 4 PDDPKER 10
P DP ER
Sbjct: 432 PRDPTER 438
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YNLPDDPKE 9
YNL DP E
Sbjct: 1035 YNLVKDPLE 1043
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 DDPKER 10
DDPK R
Sbjct: 95 DDPKHR 100
>sp|VE6_HPV26|PROTEIN E6|Human papillomavirus type 26
Query: 5 DDPKER 10
+DP+ER
Sbjct: 3 EDPRER 8
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 3 LPDDP 7
LPDDP
Sbjct: 561 LPDDP 565
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 PDDPKER 10
PD+ KER
Sbjct: 453 PDNNKER 459
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 NLPDDPKER 10
++PDD +ER
Sbjct: 1301 SVPDDYEER 1309
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 PDDPKER 10
PD+ KER
Sbjct: 453 PDNNKER 459
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 NLPDDPKER 10
++PDD +ER
Sbjct: 1280 SVPDDYEER 1288
18|SequenceR|95|86|CGGLFYNLPD
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 GGLFYN 7
GGLFYN
Sbjct: 3 GGLFYN 8
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 GGLFYN 7
GGLFYN
Sbjct: 3 GGLFYN 8
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 GGLFYN 7
GGLFYN
Sbjct: 3 GGLFYN 8
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 2 GGLFYNLP 9
GGLF +LP
Sbjct: 108 GGLFVSLP 115
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 GGLFYNLPD 10
G + YNLP+
Sbjct: 2156 GSVLYNLPN 2164
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 2 GGLFYNLP 9
GGLF +LP
Sbjct: 108 GGLFVSLP 115
>sp|VP6_ROTJ1|INTERMEDIATE capsid protein VP6|Rotavirus X (strain
Query: 1 CGGLFYNLPD 10
C G YNL D
Sbjct: 44 CNGKVYNLRD 53
>sp|VP6_ROTB2|INTERMEDIATE capsid protein VP6|Rotavirus X (isolate
Query: 1 CGGLFYNLPD 10
C G YNL D
Sbjct: 44 CNGKVYNLRD 53
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 2 GGLFYNLP 9
GG+F+ LP
Sbjct: 75 GGVFHELP 82
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LFYNLPD 10
LFY+ PD
Sbjct: 562 LFYHTPD 568
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LFYNLPD 10
LFY+ PD
Sbjct: 562 LFYHTPD 568
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 CGGLFYNLPD 10
CG ++ PD
Sbjct: 1365 CGAIYRKWPD 1374
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 GGLFYNL 8
GGLFY++
Sbjct: 772 GGLFYHI 778
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 CGGLFYN 7
CGG YN
Sbjct: 2684 CGGPMYN 2690
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 CGGLFYN 7
CGG YN
Sbjct: 2685 CGGPMYN 2691
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 CGGLFYN 7
CGG YN
Sbjct: 2685 CGGPMYN 2691
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 1 CGGLFYNLPD 10
C G+ N+P+
Sbjct: 276 CLGMLLNIPE 285
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 GGLFY 6
GGLFY
Sbjct: 3039 GGLFY 3043
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 GGLFY 6
GGLFY
Sbjct: 3037 GGLFY 3041
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 GGLFY 6
GGLFY
Sbjct: 3039 GGLFY 3043
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 GGLFY 6
GGLFY
Sbjct: 3039 GGLFY 3043
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 GGLFY 6
GGLFY
Sbjct: 3039 GGLFY 3043
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 GGLFY 6
GGLFY
Sbjct: 3039 GGLFY 3043
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 GGLFY 6
GGLFY
Sbjct: 3039 GGLFY 3043
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 GGLFY 6
GGLFY
Sbjct: 3041 GGLFY 3045
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 GGLFY 6
GGLFY
Sbjct: 3041 GGLFY 3045
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 GGLFYNL 8
GGLFY++
Sbjct: 769 GGLFYHV 775
>sp|M1_I97A1|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I97A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I96A0|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I89A2|MATRIX protein 1|Influenza A virus (strain A/Beijing/353/1989
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I88A7|MATRIX protein 1|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I88A5|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I88A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/8/1988
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I85A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I83A8|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I82A7|MATRIX protein 1|Influenza A virus (strain A/Swine/Hong
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I81A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I80A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I80A2|MATRIX protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I79A0|MATRIX protein 1|Influenza A virus (strain A/Bangkok/1/1979
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I78A8|MATRIX protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I78A7|MATRIX protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I78A3|MATRIX protein 1|Influenza A virus (strain A/Mallard/New
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I77AC|MATRIX protein 1|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I77A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I76A6|MATRIX protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I75A0|MATRIX protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I73A5|MATRIX protein 1|Influenza A virus (strain A/Port
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I72A8|MATRIX protein 1|Influenza A virus (strain A/Udorn/1972
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I72A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I72A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I72A2|MATRIX protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I71A1|MATRIX protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I70A0|MATRIX protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I69A0|MATRIX protein 1|Influenza A virus (strain A/England/878/1969
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I68A6|MATRIX protein 1|Influenza A virus (strain A/Northern
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I68A4|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I68A0|MATRIX protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I67A2|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I67A0|MATRIX protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I61A1|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I59A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I57A5|MATRIX protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I57A3|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I57A2|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I57A1|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I57A0|MATRIX protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I56A3|MATRIX protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I54A1|MATRIX protein 1|Influenza A virus (strain A/Swine/May/1954
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I51A0|MATRIX protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I50A0|MATRIX protein 1|Influenza A virus (strain A/Fort
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I45A0|MATRIX protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I37A0|MATRIX protein 1|Influenza A virus (strain A/Swine/29/1937
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I36A0|MATRIX protein 1|Influenza A virus (strain A/Henry/1936
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I35A3|MATRIX protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I34A1|MATRIX protein 1|Influenza A virus (strain A/Puerto
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I33A0|MATRIX protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I30A0|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I18A0|MATRIX protein 1|Influenza A virus (strain A/Brevig
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 124 CMGLIYN 130
>sp|M1_I06A0|MATRIX protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I05A1|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I03A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I03A0|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I02A7|MATRIX protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 125 CMGLIYN 131
>sp|M1_I02A6|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I02A5|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I02A4|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I02A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I02A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I02A1|MATRIX protein 1|Influenza A virus (strain A/Guinea
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 120 CMGLIYN 126
>sp|M1_I02A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I01A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I01A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I01A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I01A0|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I00A0|MATRIX protein 1|Influenza A virus (strain A/Duck/Hong
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I000X|MATRIX protein 1|Influenza A virus (strain A/X-31
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|M1_I000F|MATRIX protein 1|Influenza A virus (strain A/Chicken/Weybridge
Query: 1 CGGLFYN 7
C GL YN
Sbjct: 127 CMGLIYN 133
>sp|PG161_VARV|PROTEIN OPG161|Variola virus
Query: 1 CGGLFY 6
C GL+Y
Sbjct: 99 CNGLYY 104
>sp|PG161_VAR67|PROTEIN OPG161|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CGGLFY 6
C GL+Y
Sbjct: 99 CNGLYY 104
>sp|PG161_VACCC|PROTEIN OPG161|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CGGLFY 6
C GL+Y
Sbjct: 100 CNGLYY 105
>sp|PG161_MONPV|PROTEIN OPG161|Monkeypox virus (MPXV)
Query: 1 CGGLFY 6
C GL+Y
Sbjct: 100 CNGLYY 105
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 GGLFYNLP 9
GG+ ++LP
Sbjct: 1498 GGVLWDLP 1505
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 CGGLFYNLP 9
CG + + LP
Sbjct: 997 CGDILHGLP 1005
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 CGGLFYNLP 9
CG + + LP
Sbjct: 997 CGDILHGLP 1005
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 CGGLFYNLP 9
CG + + LP
Sbjct: 997 CGDILHGLP 1005
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 4 LFYNLP 9
L+YNLP
Sbjct: 433 LYYNLP 438
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 CGGLFYNLP 9
CG + + LP
Sbjct: 997 CGDILHGLP 1005
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 CGGLFYNLP 9
CG + + LP
Sbjct: 997 CGDILHGLP 1005
>sp|US13_HCMVM|MEMBRANE protein US13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CGGLFYNLPD 10
CG ++ +PD
Sbjct: 50 CGMIWLGIPD 59
>sp|US13_HCMVA|UNCHARACTERIZED protein HVLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CGGLFYNLPD 10
CG ++ +PD
Sbjct: 50 CGMIWLGIPD 59
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CGGLFYNL 8
CG +F N+
Sbjct: 260 CGNIFLNV 267
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CGGLFYNL 8
CG +F N+
Sbjct: 260 CGNIFLNV 267
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 5 FYNLPD 10
FY +PD
Sbjct: 23 FYTIPD 28
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 5 FYNLPD 10
++N+PD
Sbjct: 224 YFNIPD 229
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 5 FYNLPD 10
++N+PD
Sbjct: 224 YFNIPD 229
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CGGLFYNL 8
CG YN+
Sbjct: 2936 CGSCVYNM 2943
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CGGLFYNL 8
CG YN+
Sbjct: 2936 CGSCVYNM 2943
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CGGLFYNL 8
CG YN+
Sbjct: 2936 CGSCVYNM 2943
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CGGLFYNL 8
CG YN+
Sbjct: 2936 CGSCVYNM 2943
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CGGLFYNL 8
CG YN+
Sbjct: 2936 CGSCVYNM 2943
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 CGGLFYNLP 9
CG + + LP
Sbjct: 997 CGDIIHGLP 1005
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CGGLFYNLP 9
C FY LP
Sbjct: 1325 CKSAFYVLP 1333
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 1 CGGLFYNLP 9
CG YN P
Sbjct: 396 CGNGAYNWP 404
>sp|E4RF2_ADE02|EARLY 4 ORF2 protein|Human adenovirus C serotype 2
Query: 3 GLFYNLP 9
G+F N+P
Sbjct: 108 GIFVNVP 114
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CGGLFYNLP 9
C FY LP
Sbjct: 1325 CKSAFYVLP 1333
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CGGLFYNLP 9
C FY LP
Sbjct: 1349 CKSAFYILP 1357
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CGGLFYNLP 9
C FY LP
Sbjct: 1349 CKSAFYILP 1357
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GGLFYNLP 9
GGL +LP
Sbjct: 104 GGLILSLP 111
>sp|VB10_VACCT|KELCH repeat protein B10|Vaccinia virus (strain Tian Tan)
Query: 2 GGLFYN 7
GGLF N
Sbjct: 30 GGLFIN 35
>sp|VB10_VACCC|KELCH repeat protein B10|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GGLFYN 7
GGLF N
Sbjct: 30 GGLFIN 35
19|SequenceR|100|91|TLGGACGGLF
>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 GGACGGLF 10
GGACGGL+
Sbjct: 25 GGACGGLW 32
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TLGGACGGLF 10
TL GAC GL+
Sbjct: 823 TLAGACRGLW 832
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 LGGACGGLF 10
+G CGGLF
Sbjct: 277 IGDLCGGLF 285
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 GGACGGLF 10
GG CG L+
Sbjct: 1360 GGVCGALY 1367
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 GGACGGLF 10
GG CG L+
Sbjct: 1360 GGVCGALY 1367
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 GGACGGLF 10
GG CG L+
Sbjct: 1360 GGVCGALY 1367
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 LGGACGGLF 10
LG CGG+F
Sbjct: 277 LGDLCGGVF 285
>sp|UL24_VZVO|PROTEIN UL24 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 GACGGLF 10
GACGG+
Sbjct: 242 GACGGIL 248
>sp|UL24_VZVD|PROTEIN UL24 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 GACGGLF 10
GACGG+
Sbjct: 242 GACGGIL 248
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 6 CGGLF 10
CGGLF
Sbjct: 346 CGGLF 350
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 GGACGG 8
GACGG
Sbjct: 25 AGACGG 30
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 LGGACGGLF 10
+G CGG+F
Sbjct: 277 IGDLCGGVF 285
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 LGGACGGLF 10
+G CGG+F
Sbjct: 277 VGDLCGGIF 285
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 LGGACGGLF 10
LGG GGL+
Sbjct: 1245 LGGVMGGLW 1253
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 4 GACGGLF 10
G CGGL
Sbjct: 1737 GMCGGLL 1743
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 4 GACGGLF 10
G CGGL
Sbjct: 1676 GMCGGLL 1682
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 4 GACGGLF 10
G CGGL
Sbjct: 1667 GMCGGLL 1673
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 4 GACGGLF 10
G CGGL
Sbjct: 1668 GMCGGLL 1674
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 TLGGACGGL 9
T G CGG+
Sbjct: 1704 TRAGQCGGI 1712
Query: 4 GACGGLF 10
G CGG+
Sbjct: 986 GDCGGIL 992
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 3 GGACGGLF 10
GG C G F
Sbjct: 11 GGGCTGWF 18
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1691 TRAGQCGGVL 1700
Query: 4 GACGGLF 10
G CGG+
Sbjct: 968 GDCGGIL 974
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1690 TRAGQCGGVL 1699
Query: 4 GACGGLF 10
G CGG+
Sbjct: 967 GDCGGIL 973
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1692 TRAGQCGGVL 1701
Query: 4 GACGGLF 10
G CGG+
Sbjct: 969 GDCGGIL 975
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1690 TRAGQCGGVL 1699
Query: 4 GACGGLF 10
G CGG+
Sbjct: 967 GDCGGIL 973
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1700 TRAGQCGGVL 1709
Query: 4 GACGGLF 10
G CGG+
Sbjct: 977 GDCGGIL 983
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1688 TRAGQCGGVL 1697
Query: 4 GACGGLF 10
G CGG+
Sbjct: 965 GDCGGIL 971
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1693 TRAGQCGGVL 1702
Query: 4 GACGGLF 10
G CGG+
Sbjct: 970 GDCGGIL 976
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1681 TRAGQCGGVL 1690
Query: 4 GACGGLF 10
G CGG+
Sbjct: 958 GDCGGIL 964
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1681 TRAGQCGGVL 1690
Query: 4 GACGGLF 10
G CGG+
Sbjct: 958 GDCGGIL 964
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1682 TRAGQCGGVL 1691
Query: 4 GACGGLF 10
G CGG+
Sbjct: 959 GDCGGIL 965
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1680 TRAGQCGGVL 1689
Query: 4 GACGGLF 10
G CGG+
Sbjct: 957 GDCGGIL 963
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1680 TRAGQCGGVL 1689
Query: 4 GACGGLF 10
G CGG+
Sbjct: 957 GDCGGIL 963
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1682 TRAGQCGGVL 1691
Query: 4 GACGGLF 10
G CGG+
Sbjct: 959 GDCGGIL 965
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1682 TRAGQCGGVL 1691
Query: 4 GACGGLF 10
G CGG+
Sbjct: 959 GDCGGIL 965
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1684 TRAGQCGGVL 1693
Query: 4 GACGGLF 10
G CGG+
Sbjct: 961 GDCGGIL 967
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1679 TRAGQCGGVL 1688
Query: 4 GACGGLF 10
G CGG+
Sbjct: 956 GDCGGIL 962
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1698 TRAGQCGGVL 1707
Query: 4 GACGGLF 10
G CGG+
Sbjct: 975 GDCGGIL 981
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 TLGGACG 7
++GG CG
Sbjct: 883 SIGGVCG 889
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 TLGGACG 7
++GG CG
Sbjct: 873 SIGGVCG 879
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 TLGGACG 7
++GG CG
Sbjct: 873 SIGGVCG 879
>sp|UL24_HHV2H|PROTEIN UL24|Human herpesvirus 2 (strain HG52)
Query: 1 TLGGAC 6
TLGG C
Sbjct: 101 TLGGVC 106
>sp|UL24_HHV11|PROTEIN UL24|Human herpesvirus 1 (strain 17)
Query: 1 TLGGAC 6
TLGG C
Sbjct: 90 TLGGVC 95
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 LGGACGGLF 10
LGG GGL+
Sbjct: 1245 LGGMMGGLW 1253
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 LGGACGGLF 10
LGG GGL+
Sbjct: 1245 LGGMMGGLW 1253
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 LGGACGGLF 10
LGG GGL+
Sbjct: 1245 LGGMMGGLW 1253
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 LGGACGGLF 10
LGG GGL+
Sbjct: 1245 LGGMMGGLW 1253
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 LGGACGGLF 10
LGG GGL+
Sbjct: 1245 LGGMMGGLW 1253
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 LGGACGGLF 10
LGG GGL+
Sbjct: 1245 LGGMMGGLW 1253
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 LGGACGGLF 10
LGG GGL+
Sbjct: 1245 LGGMMGGLW 1253
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 TLGGACGGL 9
T G CGG+
Sbjct: 1704 TRAGQCGGV 1712
Query: 4 GACGGLF 10
G CGG+
Sbjct: 985 GDCGGIL 991
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 TLGGACGGL 9
T G CGG+
Sbjct: 1704 TRAGQCGGV 1712
Query: 4 GACGGLF 10
G CGG+
Sbjct: 985 GDCGGIL 991
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 TLGGACGGL 9
T G CGG+
Sbjct: 1705 TRAGQCGGV 1713
Query: 4 GACGGLF 10
G CGG+
Sbjct: 986 GDCGGIL 992
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 TLGGACGGL 9
T G CGG+
Sbjct: 1705 TRAGQCGGV 1713
Query: 4 GACGGLF 10
G CGG+
Sbjct: 986 GDCGGIL 992
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 TLGGACGGL 9
T G CGG+
Sbjct: 1707 TRAGQCGGV 1715
Query: 4 GACGGLF 10
G CGG+
Sbjct: 988 GDCGGIL 994
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 TLGGACGGL 9
T G CGG+
Sbjct: 1707 TRAGQCGGV 1715
Query: 4 GACGGLF 10
G CGG+
Sbjct: 988 GDCGGIL 994
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 TLGGACGGL 9
T G CGG+
Sbjct: 1696 TRAGQCGGV 1704
Query: 4 GACGGLF 10
G CGGL
Sbjct: 972 GDCGGLL 978
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 TLGGACGGL 9
T G CGG+
Sbjct: 1712 TRAGQCGGV 1720
Query: 4 GACGGLF 10
G CGG+
Sbjct: 993 GDCGGIL 999
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 LGGACGG 8
LGG C G
Sbjct: 6661 LGGNCAG 6667
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 LGGACGG 8
LGG C G
Sbjct: 6681 LGGNCAG 6687
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 LGGACGG 8
LGG C G
Sbjct: 6711 LGGNCAG 6717
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 LGGACGGLF 10
LGG GGL+
Sbjct: 1245 LGGMMGGLW 1253
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 TLGGACGGL 9
T G CGG+
Sbjct: 1690 TKAGQCGGV 1698
Query: 4 GACGGLF 10
G CGG+
Sbjct: 970 GDCGGIL 976
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 TLGGACGGL 9
T G CGG+
Sbjct: 1690 TKAGQCGGV 1698
Query: 4 GACGGLF 10
G CGG+
Sbjct: 970 GDCGGIL 976
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 TLGGACGGL 9
T G CGG+
Sbjct: 1690 TKAGQCGGV 1698
Query: 4 GACGGLF 10
G CGG+
Sbjct: 970 GDCGGIL 976
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 TLGGACGGL 9
T G CGG+
Sbjct: 1690 TKAGQCGGV 1698
Query: 4 GACGGLF 10
G CGG+
Sbjct: 970 GDCGGIL 976
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 TLGGACG 7
++GG CG
Sbjct: 883 SIGGECG 889
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1663 TKAGYCGGVL 1672
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 TLGGAC 6
TLGG C
Sbjct: 157 TLGGGC 162
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1649 TKSGYCGGVL 1658
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1656 TKSGYCGGVL 1665
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1656 TKSGYCGGVL 1665
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1652 TKSGYCGGVL 1661
>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 164 TRAGQCGGVL 173
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1677 TKTGQCGGVL 1686
Query: 4 GACGGLF 10
G CGG+
Sbjct: 962 GDCGGIL 968
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 TLGGACGGLF 10
T G CGG+
Sbjct: 1678 TKTGQCGGVL 1687
Query: 4 GACGGLF 10
G CGG+
Sbjct: 963 GDCGGIL 969
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TLGGAC 6
T+GG+C
Sbjct: 1076 TVGGSC 1081
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 TLGGAC 6
T+GG+C
Sbjct: 1076 TVGGSC 1081
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LGGACGG 8
L G CGG
Sbjct: 1687 LPGMCGG 1693
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LGGACGG 8
L G CGG
Sbjct: 1687 LPGMCGG 1693
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LGGACGG 8
L G CGG
Sbjct: 1687 LPGMCGG 1693
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LGGACGG 8
L G CGG
Sbjct: 1687 LPGMCGG 1693
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LGGACGG 8
L G CGG
Sbjct: 1687 LPGMCGG 1693
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LGGACGG 8
L G CGG
Sbjct: 1521 LPGMCGG 1527
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LGGACGG 8
L G CGG
Sbjct: 1687 LPGMCGG 1693
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LGGACGG 8
L G CGG
Sbjct: 1687 LPGMCGG 1693
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LGGACGG 8
L G CGG
Sbjct: 1685 LPGMCGG 1691
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LGGACGG 8
L G CGG
Sbjct: 1687 LPGMCGG 1693
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 3 GGACGGL 9
GG C G+
Sbjct: 175 GGKCSGI 181
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 3 GGACGGL 9
GG C G+
Sbjct: 175 GGKCSGI 181
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 GACGGLF 10
G CGG+
Sbjct: 970 GDCGGIL 976
Query: 4 GACGGL 9
G CGG+
Sbjct: 1693 GQCGGV 1698
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 GACGGL 9
G CGG+
Sbjct: 1655 GQCGGV 1660
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 4 GACGG 8
G+CGG
Sbjct: 97 GSCGG 101
20|SequenceR|105|96|TRAGLTLGGA
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 1 TRAGLTLG 8
TR+GLT+G
Sbjct: 342 TRSGLTIG 349
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 1 TRAGLTLG 8
TR+GLT+G
Sbjct: 362 TRSGLTIG 369
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 1 TRAGLTLGG 9
TR+G+ +GG
Sbjct: 311 TRSGIRIGG 319
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 1 TRAGLTLGG 9
TR+G+T+G
Sbjct: 331 TRSGVTIGA 339
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 3 AGLTLGG 9
AGLTLGG
Sbjct: 32 AGLTLGG 38
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 1 TRAGLTLG 8
TR+GL++G
Sbjct: 347 TRSGLSVG 354
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 RAGLTLG 8
R+G+TLG
Sbjct: 99 RSGITLG 105
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 RAGLTLG 8
R+G+TLG
Sbjct: 99 RSGITLG 105
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 3 AGLTLGG 9
AGLT+GG
Sbjct: 32 AGLTMGG 38
>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31
Query: 1 TRAGLTLGG 9
TR+G T+G
Sbjct: 307 TRSGATIGA 315
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 1 TRAGLTLGG 9
TR+G T+G
Sbjct: 352 TRSGATVGA 360
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 1 TRAGLTLGG 9
TR+G +GG
Sbjct: 307 TRSGKQIGG 315
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 1 TRAGLTLGG 9
TR+G +GG
Sbjct: 316 TRSGKRIGG 324
>sp|B4_HHV6Z|PROTEIN B4|Human herpesvirus 6B (strain Z29)
Query: 5 LTLGGA 10
LTLGGA
Sbjct: 139 LTLGGA 144
>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55
Query: 1 TRAGLTLGG 9
TR+G +GG
Sbjct: 308 TRSGKHIGG 316
>sp|VL2_HPV44|MINOR capsid protein L2|Human papillomavirus 44
Query: 1 TRAGLTLGG 9
TR+G +GG
Sbjct: 308 TRSGKHIGG 316
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 TRAGLTLGG 9
TR+G +GG
Sbjct: 309 TRSGKHIGG 317
21|SequenceR|110|101|IGYNHTRAGL
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 IGYNHTRAG 9
+GYNHT G
Sbjct: 211 VGYNHTHPG 219
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 1 IGYNHTRAG 9
+GYNHT G
Sbjct: 362 VGYNHTTLG 370
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 IGYNHTRAG 9
+GY+HT G
Sbjct: 209 VGYDHTHPG 217
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 IGYNHTRAG 9
+GYN+T G
Sbjct: 211 VGYNYTHPG 219
>sp|E320_ADE03|EARLY E3 20.1 kDa glycoprotein|Human adenovirus B serotype 3
Query: 1 IGYNHTRAG 9
+G+NHT G
Sbjct: 26 LGHNHTLVG 34
>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54
Query: 5 HTRAGL 10
HTR+GL
Sbjct: 309 HTRSGL 314
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 IGYNHTRAGL 10
+ YN T AGL
Sbjct: 4827 VCYNKTYAGL 4836
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 IGYNHTR 7
I Y HTR
Sbjct: 1295 ISYKHTR 1301
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 IGYNHTRA 8
+G+N TRA
Sbjct: 260 LGFNGTRA 267
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 GYNHTRAGL 10
GYNH A L
Sbjct: 228 GYNHDVATL 236
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IGYNHTR 7
+GY H+R
Sbjct: 649 MGYGHSR 655
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 IGYNHTR 7
+GY+H R
Sbjct: 1294 LGYSHKR 1300
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 IGYNH 5
+GYNH
Sbjct: 951 LGYNH 955
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YNHTRAGL 10
Y H RAG+
Sbjct: 87 YVHQRAGV 94
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YNHTRAGL 10
Y H RAG+
Sbjct: 87 YVHQRAGV 94
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 GYNHTRAGL 10
GYNH + L
Sbjct: 228 GYNHDVSNL 236
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 GYNHTRAGL 10
GYNH + L
Sbjct: 228 GYNHDVSNL 236
>sp|TEG3_VZVO|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 HTRAGL 10
H RAGL
Sbjct: 22 HNRAGL 27
>sp|TEG3_VZVD|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Dumas)
Query: 5 HTRAGL 10
H RAGL
Sbjct: 22 HNRAGL 27
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 IGYNHTRAGL 10
I YN T +GL
Sbjct: 1311 IPYNPTSSGL 1320
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 IGYNHTRAGL 10
I YN T +GL
Sbjct: 1290 IPYNPTSSGL 1299
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 GYNHTRAGL 10
GYNH + L
Sbjct: 228 GYNHDVSNL 236
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 GYNHTRAGL 10
GYNH + L
Sbjct: 228 GYNHDVSNL 236
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 GYNHTRAGL 10
GYNH + L
Sbjct: 228 GYNHDVSNL 236
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GYNHTRA 8
G+N TRA
Sbjct: 264 GFNGTRA 270
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GYNHTRA 8
G+N TRA
Sbjct: 264 GFNGTRA 270
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GYNHTRA 8
G+N TRA
Sbjct: 270 GFNGTRA 276
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GYNHTRA 8
G+N TRA
Sbjct: 260 GFNGTRA 266
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GYNHTRA 8
G+N TRA
Sbjct: 262 GFNGTRA 268
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GYNHTRA 8
G+N TRA
Sbjct: 261 GFNGTRA 267
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GYNHTRA 8
G+N TRA
Sbjct: 268 GFNGTRA 274
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GYNHTRA 8
G+N TRA
Sbjct: 270 GFNGTRA 276
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GYNHTRA 8
G+N TRA
Sbjct: 269 GFNGTRA 275
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GYNHTRA 8
G+N TRA
Sbjct: 270 GFNGTRA 276
>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b
Query: 2 GYNHTRAG 9
G HTR+G
Sbjct: 303 GSMHTRSG 310
>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a
Query: 2 GYNHTRAG 9
G HTR+G
Sbjct: 303 GSMHTRSG 310
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YNHTRA 8
YN+TRA
Sbjct: 408 YNNTRA 413
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GYNHTRA 8
G+N TRA
Sbjct: 259 GFNGTRA 265
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 GYNH 5
GYNH
Sbjct: 228 GYNH 231
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 2 GYNH 5
GYNH
Sbjct: 31 GYNH 34
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GYNH 5
GYNH
Sbjct: 31 GYNH 34
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 2 GYNH 5
GYNH
Sbjct: 31 GYNH 34
>sp|Y172_ADE02|UNCHARACTERIZED protein D-172|Human adenovirus C serotype 2
Query: 2 GYNHTR 7
G NHTR
Sbjct: 46 GVNHTR 51
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 GYNH 5
GYNH
Sbjct: 228 GYNH 231
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 GYNH 5
GYNH
Sbjct: 228 GYNH 231
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 IGYNHTRAGL 10
+ YN T +GL
Sbjct: 1290 VPYNPTSSGL 1299
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 IGYNHTRAGL 10
+ YN T +GL
Sbjct: 1312 VPYNPTSSGL 1321
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 IGYNHTRAGL 10
+ YN T +GL
Sbjct: 1312 VPYNPTSSGL 1321
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 IGYNHTRAGL 10
+ YN T +GL
Sbjct: 1312 VPYNPTSSGL 1321
>sp|VP2_POVKI|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 350)
Query: 2 GYNHTRAGL 10
GYN AGL
Sbjct: 120 GYNPQGAGL 128
>sp|VP2_POVK6|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 60)
Query: 2 GYNHTRAGL 10
GYN AGL
Sbjct: 120 GYNPQGAGL 128
>sp|VP2_POVK3|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 380)
Query: 2 GYNHTRAGL 10
GYN AGL
Sbjct: 120 GYNPQGAGL 128
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 2 GYNHTR 7
GY HT+
Sbjct: 134 GYGHTQ 139
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 2 GYNHTR 7
GY HT+
Sbjct: 134 GYGHTQ 139
22|SequenceR|115|106|CAAAGIGYNH
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 2 AAAGIGYN 9
AAAG G+N
Sbjct: 35 AAAGSGFN 42
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 AAAGIGYN 9
AAAG G+N
Sbjct: 35 AAAGSGFN 42
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 AAAGIGYN 9
A AGI YN
Sbjct: 2050 AEAGISYN 2057
Query: 1 CAAAGIG 7
CA AGI
Sbjct: 1343 CATAGIA 1349
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 AAAGIGYN 9
AAAGI Y+
Sbjct: 2053 AAAGISYH 2060
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 5 GIGYNH 10
G+GY H
Sbjct: 1529 GVGYGH 1534
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 5 GIGYNH 10
G+GY H
Sbjct: 1529 GVGYGH 1534
>sp|ORF24_TTVV7|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 AAAGIGYNH 10
A G+G NH
Sbjct: 56 GAPGVGGNH 64
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 AAAGIG 7
AAAGIG
Sbjct: 517 AAAGIG 522
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 AAAGIG 7
AAAGIG
Sbjct: 517 AAAGIG 522
>sp|ORF23_TTVV7|PROBABLE protein VP2|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 AAAGIGYNH 10
A G+G NH
Sbjct: 56 GAPGVGGNH 64
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 3 AAGIGYNH 10
A+G G NH
Sbjct: 1997 ASGAGNNH 2004
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CAAAGIGYN 9
CA A +G N
Sbjct: 81 CAEARVGIN 89
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 5 GIGYN 9
G+GYN
Sbjct: 227 GLGYN 231
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 5 GIGYN 9
G+GYN
Sbjct: 248 GLGYN 252
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 2 AAAGIGYNH 10
AAAG Y H
Sbjct: 305 AAAGGRYEH 313
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 2 AAAGIGY 8
A +GIGY
Sbjct: 99 ALSGIGY 105
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 AAAGIGYN 9
AAAG G+N
Sbjct: 645 AAAGSGHN 652
23|SequenceR|120|111|IGFYVCAAAG
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 GFYVCAAA 9
F++CAAA
Sbjct: 1021 AFFLCAAA 1028
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 GFYVCAAA 9
F++CAAA
Sbjct: 1018 AFFLCAAA 1025
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 IGFYVCAAAG 10
+G Y+C A G
Sbjct: 2806 LGSYLCKATG 2815
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 2 GFYVCAAAG 10
G+Y+C G
Sbjct: 243 GYYICIVGG 251
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 2 GFYVCAAAG 10
G+Y+C G
Sbjct: 243 GYYICIVGG 251
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 2 GFYVCAAAG 10
G+Y+C G
Sbjct: 243 GYYICIVGG 251
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 IGFYVCAA 8
+GF +C+A
Sbjct: 3288 LGFAICSA 3295
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 IGFYVCAA 8
+GF +C+A
Sbjct: 3287 LGFAICSA 3294
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 IGFYVCAA 8
+GF +C+A
Sbjct: 3287 LGFAICSA 3294
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 GFYVCAAAG 10
G+Y+C G
Sbjct: 241 GYYICIIGG 249
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 GFYVCAAAG 10
G+Y+C G
Sbjct: 241 GYYICIIGG 249
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 GFYVCAAAG 10
G+Y+C G
Sbjct: 241 GYYICIIGG 249
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 GFYVCAAAG 10
G+Y+C G
Sbjct: 241 GYYICIIGG 249
>sp|HEMA_VAR67|PROTEIN OPG185|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 GFYVCA 7
G YVCA
Sbjct: 101 GTYVCA 106
>sp|HEMA_VACCT|PROTEIN OPG185|Vaccinia virus (strain Tian Tan)
Query: 2 GFYVCA 7
G YVCA
Sbjct: 99 GTYVCA 104
>sp|HEMA_VACCI|PROTEIN OPG185|Vaccinia virus (strain IHD-J) (VACV)
Query: 2 GFYVCA 7
G YVCA
Sbjct: 99 GTYVCA 104
>sp|HEMA_VACCC|PROTEIN OPG185|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GFYVCA 7
G YVCA
Sbjct: 99 GTYVCA 104
>sp|HEMA_VACCA|PROTEIN OPG185|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GFYVCA 7
G YVCA
Sbjct: 99 GTYVCA 104
>sp|HEMA_CWPXG|PROTEIN OPG185|Cowpox virus (strain GRI-90 /
Query: 2 GFYVCA 7
G YVCA
Sbjct: 99 GTYVCA 104
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 IGFYVC 6
IGF VC
Sbjct: 799 IGFRVC 804
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 IGFYVC 6
IGF VC
Sbjct: 799 IGFRVC 804
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 YVCAAAG 10
YVC A+G
Sbjct: 5018 YVCNASG 5024
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 GFYVC 6
G+YVC
Sbjct: 246 GYYVC 250
>sp|HEMA_MONPV|PROTEIN OPG185|Monkeypox virus (MPXV)
Query: 2 GFYVCA 7
G Y+CA
Sbjct: 99 GTYICA 104
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 GFYVC 6
G+Y+C
Sbjct: 253 GYYIC 257
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 GFYVC 6
G+Y+C
Sbjct: 253 GYYIC 257
24|SequenceR|125|116|VLSAAIGFYV
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 4 AAIGFY 9
AA+GFY
Sbjct: 445 AAVGFY 450
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 1 VLSAAIGFY 9
VL A I FY
Sbjct: 103 VLDAGIAFY 111
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 LSAAIGFYV 10
LSA IG Y+
Sbjct: 726 LSAIIGIYL 734
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LSAAIGFYV 10
LSA IG Y+
Sbjct: 726 LSAIIGIYL 734
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LSAAIGFYV 10
LSA IG Y+
Sbjct: 727 LSAIIGIYL 735
25|SequenceR|130|121|LRGMKVLSAA
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 2 RGMKVLSA 9
RG+ VLSA
Sbjct: 273 RGIDVLSA 280
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RGMKVLSA 9
RG+ VLSA
Sbjct: 273 RGIDVLSA 280
>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 LRGMKVLS 8
+RG K+LS
Sbjct: 126 IRGEKILS 133
>sp|VIF_HV2EH|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 LRGMKVLS 8
+RG K+LS
Sbjct: 126 IRGEKILS 133
>sp|VIF_HV2D2|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 LRGMKVLS 8
+RG K+LS
Sbjct: 126 IRGEKILS 133
26|SequenceR|135|126|VEWGELRGMK
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 3 WGELR 7
WGELR
Sbjct: 84 WGELR 88
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 WGELRGMK 10
WGEL G++
Sbjct: 752 WGELFGVQ 759
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 WGELRGMK 10
WGEL G++
Sbjct: 736 WGELFGVQ 743
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 1 VEWGELRGMK 10
V W +L+G+K
Sbjct: 159 VGWADLQGLK 168
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 2 EWGELRG 8
+WG+L G
Sbjct: 258 DWGQLSG 264
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 2 EWGELRG 8
+WG+L G
Sbjct: 258 DWGQLSG 264
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 2 EWGELRG 8
+WG+L G
Sbjct: 258 DWGQLSG 264
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 2 EWGELRG 8
+WG+L G
Sbjct: 258 DWGQLSG 264
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 2 EWGELRG 8
+WG+L G
Sbjct: 258 DWGQLSG 264
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 2 EWGELRG 8
+WG+L G
Sbjct: 258 DWGQLSG 264
>sp|E316_ADE03|EARLY E3 16 kDa glycoprotein|Human adenovirus B serotype 3
Query: 4 GELRGM 9
GELRG+
Sbjct: 92 GELRGL 97
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 WGELRGMK 10
WG L G+K
Sbjct: 353 WGVLAGIK 360
>sp|NP_ADE04|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus E serotype 4
Query: 3 WGELRG 8
WG L+G
Sbjct: 44 WGALKG 49
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 VEWGELRGMK 10
V+W E G K
Sbjct: 1659 VDWVEFYGFK 1668
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 VEWGELRGMK 10
V+W E G K
Sbjct: 1659 VDWVEFYGFK 1668
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 3 WGELR 7
WGE+R
Sbjct: 310 WGEIR 314
>sp|NEF_HV1U4|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VEWGELR 7
VEW E+R
Sbjct: 11 VEWPEVR 17
>sp|CAPSD_HBVC1|CAPSID protein|Hepatitis B virus genotype C
Query: 1 VEWGELRGM 9
V WGEL +
Sbjct: 60 VCWGELMNL 68
>sp|HBEAG_HBVC1|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 VEWGELRGM 9
V WGEL +
Sbjct: 89 VCWGELMNL 97
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 4 GELRGMK 10
G+LRG++
Sbjct: 169 GQLRGLR 175
27|SequenceR|141|131|VKPKAFVEWGE
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 2 KPKAFVEW 9
KP++ VEW
Sbjct: 353 KPRSLVEW 360
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 2 KPKAFVEW 9
KP++ VEW
Sbjct: 350 KPRSLVEW 357
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 3 PKAFVEWG 10
PK FVE+G
Sbjct: 373 PKEFVEFG 380
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PKAFVEW 9
P+A VEW
Sbjct: 6244 PQAEVEW 6250
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PKAFVEW 9
P+A VEW
Sbjct: 6267 PQADVEW 6273
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 VKPKAFVEW 9
V P A EW
Sbjct: 63 VSPDAVAEW 71
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 VKPKAFVEW 9
V P A EW
Sbjct: 63 VSPDAVAEW 71
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 VKPKAFVEW 9
V P A EW
Sbjct: 63 VSPDAVAEW 71
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PKAFVEWG 10
P+A+ WG
Sbjct: 103 PRAYGTWG 110
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PKAFVEWG 10
P+A+ WG
Sbjct: 103 PRAYGTWG 110
>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KPKAFVEW 9
K AF++W
Sbjct: 60 KDYAFIQW 67
THE END