1|Sequence|1|10|MAPKVFRQYW
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 3 PKVFRQYW 10
PKVF+++W
Sbjct: 1538 PKVFKRFW 1545
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 PKVFRQYW 10
PK+++++W
Sbjct: 1536 PKIYKKFW 1543
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 PKVFRQYW 10
PK+++++W
Sbjct: 1536 PKIYKKFW 1543
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 PKVFRQYW 10
PK+++++W
Sbjct: 1536 PKIYKKFW 1543
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 MAPKVFRQYW 10
M P+ F++ W
Sbjct: 1539 MTPRTFKEEW 1548
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 MAPKVFRQYW 10
+ P+V RQ W
Sbjct: 1945 LDPEVIRQLW 1954
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 3 PKVFRQYW 10
PKV+R Y+
Sbjct: 112 PKVYRTYF 119
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 PKVFRQYW 10
PKV+R Y+
Sbjct: 112 PKVYRTYF 119
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 PKVFRQYW 10
PKV+R Y+
Sbjct: 112 PKVYRTYF 119
>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 MAPKVFRQY 9
MAP + R Y
Sbjct: 204 MAPDIVRTY 212
>sp|TRX2_HHV6U|TRIPLEX capsid protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 MAPKVFRQY 9
MAP + R Y
Sbjct: 204 MAPDIVRTY 212
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 4 KVFRQYW 10
++FRQY+
Sbjct: 1261 RIFRQYF 1267
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 MAPKVFRQYW 10
M P+ R +W
Sbjct: 313 MGPRAMRGHW 322
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 APKVFRQYW 10
AP+ +Q W
Sbjct: 2340 APEALQQLW 2348
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 APKVFRQYW 10
AP+ +Q W
Sbjct: 2318 APEALQQLW 2326
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 MAPKVFRQYW 10
M P+ R +W
Sbjct: 345 MGPRAMRGHW 354
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 APKVFRQYW 10
AP+ +Q W
Sbjct: 2313 APEALQQLW 2321
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 1 MAPKVFRQYW 10
M P+ R +W
Sbjct: 348 MGPRAMRGHW 357
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 3 PKVFRQY 9
PK FR Y
Sbjct: 328 PKEFRYY 334
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 3 PKVFRQY 9
PK FR Y
Sbjct: 328 PKEFRYY 334
2|Sequence|6|15|FRQYWDIPDG
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 3 QYWDIP 8
+YWD+P
Sbjct: 394 KYWDVP 399
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 FRQYWD 6
FRQ WD
Sbjct: 1543 FRQEWD 1548
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 4 YWDIPD 9
YW +PD
Sbjct: 364 YWSLPD 369
>sp|E3RDB_ADE02|EARLY 3 receptor internalization and|Human adenovirus C serotype 2
Query: 1 FRQYWDIP 8
F Q W+IP
Sbjct: 34 FTQIWNIP 41
>sp|E3B14_ADE06|EARLY E3B 14.5 kDa protein|Human adenovirus C serotype 6
Query: 1 FRQYWDIP 8
F Q W+IP
Sbjct: 34 FTQIWNIP 41
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 4 YWDIPD 9
YW +PD
Sbjct: 438 YWSLPD 443
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 QYWDIP 8
+YW++P
Sbjct: 815 KYWEVP 820
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 4 YWDIPD 9
YW +PD
Sbjct: 438 YWSLPD 443
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 YWDIPD 9
YW PD
Sbjct: 148 YWKFPD 153
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 YWDIPD 9
YW PD
Sbjct: 148 YWKFPD 153
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 YWDIPD 9
YW PD
Sbjct: 148 YWKFPD 153
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 YWDIPD 9
YW PD
Sbjct: 148 YWKFPD 153
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 YWDIPD 9
YW PD
Sbjct: 148 YWKFPD 153
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 5 WDIPD 9
W+IPD
Sbjct: 1270 WEIPD 1274
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 QYWD 6
QYWD
Sbjct: 2025 QYWD 2028
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 QYWD 6
QYWD
Sbjct: 2025 QYWD 2028
>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 1 FRQYWDIP 8
F++Y DIP
Sbjct: 118 FKEYDDIP 125
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 RQYWDIPD 9
RQ+W + D
Sbjct: 296 RQHWTVQD 303
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 5 WDIPD 9
W+IPD
Sbjct: 401 WEIPD 405
>sp|M21_HMPVC|PROTEIN M2-1|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 YWDIPD 9
YW PD
Sbjct: 27 YWSWPD 32
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 1 FRQYWD 6
FR++W+
Sbjct: 558 FRKFWN 563
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 5 WDIP 8
WDIP
Sbjct: 1497 WDIP 1500
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 5 WDIPD 9
W++PD
Sbjct: 1266 WEVPD 1270
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 1 FRQYWDIPDG 10
+ YW +P G
Sbjct: 406 LKLYWVLPGG 415
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 FRQYWDI 7
FR+Y DI
Sbjct: 118 FREYTDI 124
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 4 YWDIPD 9
+W +PD
Sbjct: 148 WWKLPD 153
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 QYWDIP 8
QY+DIP
Sbjct: 700 QYFDIP 705
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 QYWDIP 8
QY+DIP
Sbjct: 691 QYFDIP 696
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 QYWDIP 8
QY+DIP
Sbjct: 681 QYFDIP 686
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 5 WDIP 8
WDIP
Sbjct: 432 WDIP 435
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 WDIP 8
WDIP
Sbjct: 432 WDIP 435
>sp|E3B14_ADE05|EARLY E3B 14.6 kDa protein|Human adenovirus C serotype 5
Query: 1 FRQYWDIP 8
F + W+IP
Sbjct: 32 FTRIWNIP 39
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 146 WWKLPDA 152
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 YWDIPDG 10
+W +PD
Sbjct: 148 WWKLPDA 154
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 FRQYWDIP 8
++ W+IP
Sbjct: 678 YKTIWEIP 685
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 FRQYWDIP 8
++ W+IP
Sbjct: 678 YKTIWEIP 685
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FRQYWDIP 8
++ W+IP
Sbjct: 678 YKTIWEIP 685
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 FRQYWDIP 8
++ W+IP
Sbjct: 678 YKTIWEIP 685
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 FRQYWDIP 8
++ W+IP
Sbjct: 678 YKTIWEIP 685
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 5 WDIPD 9
W++PD
Sbjct: 1270 WEMPD 1274
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 4 YWDIPDG 10
Y+DI DG
Sbjct: 50 YYDIEDG 56
>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 YWDIPD 9
+W +PD
Sbjct: 71 HWTLPD 76
>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 YWDIPD 9
+W +PD
Sbjct: 71 HWTLPD 76
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 FRQYWDIP 8
+R Y+++P
Sbjct: 625 WRDYYEVP 632
3|Sequence|11|20|DIPDGTDCHR
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PDGTDCHR 10
PD T CHR
Sbjct: 53 PDSTPCHR 60
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PDGTDCHR 10
PD T CHR
Sbjct: 63 PDSTPCHR 70
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PDGTDCHR 10
PD T CHR
Sbjct: 63 PDSTPCHR 70
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 2 IPDGTDCHR 10
+PDG CH+
Sbjct: 270 LPDGPLCHQ 278
>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 PDGTDCHR 10
PD D HR
Sbjct: 441 PDAVDLHR 448
Query: 2 IPDGTDCHR 10
+P+GT C +
Sbjct: 340 MPEGTVCSQ 348
>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 PDGTDCH 9
PD DCH
Sbjct: 309 PDYDDCH 315
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 PDGTDC 8
PDG++C
Sbjct: 116 PDGSEC 121
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 3 PDGTDCHR 10
PDG+ C R
Sbjct: 839 PDGSACGR 846
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 1 DIPDGTD 7
D+P+G D
Sbjct: 410 DLPEGND 416
>sp|PG121_VAR67|MRNA-DECAPPING protein OPG121|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 DIPDGTDCH 9
DIP D H
Sbjct: 25 DIPRSKDTH 33
>sp|PG121_VACCC|MRNA-DECAPPING protein OPG121|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DIPDGTDCH 9
DIP D H
Sbjct: 25 DIPRSKDTH 33
>sp|D9_VARV|MRNA-DECAPPING protein D9|Variola virus
Query: 1 DIPDGTDCH 9
DIP D H
Sbjct: 25 DIPRSKDTH 33
>sp|PG121_MONPV|MRNA-DECAPPING protein OPG121|Monkeypox virus (MPXV)
Query: 1 DIPDGTDCH 9
DIP D H
Sbjct: 25 DIPRSKDTH 33
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 IPDGTDC 8
IPD DC
Sbjct: 321 IPDLPDC 327
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 IPDGTDCHR 10
+P+G HR
Sbjct: 1875 VPEGEGLHR 1883
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 IPDGTDCHR 10
+P GT HR
Sbjct: 1226 MPTGTRYHR 1234
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 IPDGTDCHR 10
+P GT HR
Sbjct: 1226 MPTGTRYHR 1234
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 PDGTDC 8
PD DC
Sbjct: 184 PDDVDC 189
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 PDGTDC 8
PD DC
Sbjct: 184 PDDVDC 189
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 PDGTDC 8
PD DC
Sbjct: 184 PDDVDC 189
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 PDGTDC 8
PD DC
Sbjct: 175 PDDVDC 180
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 PDGTDC 8
PD DC
Sbjct: 175 PDDVDC 180
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 PDGTDC 8
PD DC
Sbjct: 175 PDDVDC 180
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 PDGTDC 8
PD DC
Sbjct: 175 PDDVDC 180
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 PDGTDC 8
PD DC
Sbjct: 175 PDDVDC 180
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 PDGTDC 8
PD DC
Sbjct: 166 PDDVDC 171
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 IPDGTDCHR 10
+P GT HR
Sbjct: 1227 MPTGTRYHR 1235
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 5 GTDCH 9
G DCH
Sbjct: 491 GEDCH 495
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 5 GTDCH 9
G DCH
Sbjct: 491 GKDCH 495
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 5 GTDCH 9
G DCH
Sbjct: 491 GEDCH 495
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 5 GTDCH 9
G DCH
Sbjct: 491 GEDCH 495
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 5 GTDCH 9
G DCH
Sbjct: 491 GEDCH 495
>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)
Query: 2 IPDGTDCHR 10
+P+GT C +
Sbjct: 337 MPEGTVCSQ 345
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 2 IPDGTDCHR 10
+P+GT C +
Sbjct: 337 MPEGTVCSQ 345
>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)
Query: 2 IPDGTDCHR 10
+P+GT C +
Sbjct: 337 MPEGTVCSQ 345
>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)
Query: 2 IPDGTDCHR 10
+P+GT C +
Sbjct: 337 MPEGTVCSQ 345
>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)
Query: 2 IPDGTDCHR 10
+P+GT C +
Sbjct: 337 MPEGTVCSQ 345
>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)
Query: 2 IPDGTDCHR 10
+P+GT C +
Sbjct: 337 MPEGTVCSQ 345
>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)
Query: 2 IPDGTDCHR 10
+P+GT C +
Sbjct: 337 MPEGTVCSQ 345
>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 IPDGTDCHR 10
+P+GT C +
Sbjct: 337 MPEGTVCSQ 345
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 IPDGTDCHR 10
+P+GT C +
Sbjct: 337 MPEGTVCSQ 345
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IPDGTDCH 9
+P+ T CH
Sbjct: 308 LPEQTVCH 315
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 5 GTDCH 9
G DCH
Sbjct: 491 GEDCH 495
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 2 IPDGTD 7
+PDGT+
Sbjct: 289 LPDGTE 294
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 IPDGTDCH 9
+P+ T CH
Sbjct: 308 LPEQTVCH 315
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 3 PDGTDCHR 10
PDG C R
Sbjct: 832 PDGPACGR 839
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 PDGTDCH 9
PD CH
Sbjct: 581 PDMASCH 587
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 PDGTDCH 9
PD CH
Sbjct: 581 PDMASCH 587
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 2 IPDGTDC 8
I DG DC
Sbjct: 74 ILDGIDC 80
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 IPDGTD 7
+P+GTD
Sbjct: 1947 LPEGTD 1952
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 2 IPDGTDC 8
I DG DC
Sbjct: 74 ILDGIDC 80
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 2 IPDGTDC 8
I DG DC
Sbjct: 74 ILDGIDC 80
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 2 IPDGTDC 8
I DG DC
Sbjct: 74 ILDGIDC 80
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 2 IPDGTDC 8
I DG DC
Sbjct: 74 ILDGIDC 80
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 IPDGTDC 8
I DG DC
Sbjct: 74 ILDGIDC 80
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 IPDGTD 7
+P+GTD
Sbjct: 1943 LPEGTD 1948
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 2 IPDGTDC 8
I DG DC
Sbjct: 74 ILDGIDC 80
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 2 IPDGTDC 8
I DG DC
Sbjct: 74 ILDGIDC 80
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 DIPDG 5
D+PDG
Sbjct: 856 DLPDG 860
4|Sequence|16|25|TDCHRKAYST
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 2 DCHRKAYS 9
DC+RK ++
Sbjct: 138 DCYRKNWT 145
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 2 DCHRKAYS 9
DC+RK ++
Sbjct: 132 DCYRKNWT 139
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 2 DCHRKAYS 9
DC+RK ++
Sbjct: 132 DCYRKNWT 139
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 2 DCHRKAYS 9
DC+RK ++
Sbjct: 126 DCYRKNWT 133
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 2 DCHRKAYS 9
DC+RK ++
Sbjct: 125 DCYRKNWT 132
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 2 DCHRKAYS 9
DC+RK ++
Sbjct: 126 DCYRKNWT 133
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 2 DCHRKAYS 9
DC+RK ++
Sbjct: 126 DCYRKNWT 133
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 2 DCHRKAYS 9
DC+RK ++
Sbjct: 125 DCYRKNWT 132
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 DCHRKAYS 9
DC+RK ++
Sbjct: 125 DCYRKNWT 132
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 2 DCHRKAYS 9
DC+RK ++
Sbjct: 126 DCYRKNWT 133
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 2 DCHRKAYS 9
DC+RK ++
Sbjct: 126 DCYRKNWT 133
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 2 DCHRKAYS 9
DC+RK ++
Sbjct: 126 DCYRKNWT 133
>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P
Query: 2 DCHR 5
DCHR
Sbjct: 35 DCHR 38
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 TDCHRKAYST 10
+D RKAY T
Sbjct: 766 SDQARKAYCT 775
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 TDCHRKAYST 10
+D RKAY T
Sbjct: 766 SDQARKAYCT 775
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DCHRKAY 8
DC + AY
Sbjct: 162 DCEKSAY 168
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DCHRKAY 8
DC + AY
Sbjct: 162 DCEKSAY 168
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 HRKAYS 9
HR AYS
Sbjct: 145 HRNAYS 150
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 4 HRKAYST 10
HR YST
Sbjct: 386 HRARYST 392
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 HRKAYST 10
H K YST
Sbjct: 2476 HNKVYST 2482
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 DCHRKAYST 10
DCH K S+
Sbjct: 504 DCHLKFLSS 512
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 HRKAYST 10
H K YST
Sbjct: 2476 HNKVYST 2482
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 4 HRKAYST 10
H K YST
Sbjct: 2476 HNKVYST 2482
5|Sequence|21|30|KAYSTTSIAS
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 YSTTSIAS 10
Y+T++IAS
Sbjct: 1232 YTTSTIAS 1239
6|Sequence|26|35|TSIASVAGLT
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 1 TSIASVAGL 9
TSI V+GL
Sbjct: 59 TSIPKVSGL 67
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 1 TSIASVAGL 9
TSI V+GL
Sbjct: 59 TSIPKVSGL 67
7|Sequence|31|40|VAGLTAAAYR
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VAGLTAAAY 9
++GL AAAY
Sbjct: 1 MSGLLAAAY 9
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 VAGLTAAA 8
+AGLTA+A
Sbjct: 1458 LAGLTASA 1465
8|Sequence|36|45|AAAYRVTLNP
>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 YRVTLNP 10
Y++T+NP
Sbjct: 156 YKITINP 162
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AAAYRVTLNP 10
A YR T+NP
Sbjct: 1233 AYEYRSTVNP 1242
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AAAYRVTLNP 10
A YR T+NP
Sbjct: 1233 AYEYRSTVNP 1242
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 AAAYRVTLNP 10
A YR T+NP
Sbjct: 1233 AYEYRSTVNP 1242
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 AAAYRVTLNP 10
+ +VTLNP
Sbjct: 184 SGGVKVTLNP 193
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 AAAYRVTLNP 10
+ +VTLNP
Sbjct: 184 SGGVKVTLNP 193
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 AAAYRVTLNP 10
+ +VTLNP
Sbjct: 184 SGGVKVTLNP 193
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 4 YRVTLNP 10
Y V+LNP
Sbjct: 773 YHVSLNP 779
>sp|NSP2_ROTH3|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 4 YRVTLN 9
Y+VTLN
Sbjct: 187 YKVTLN 192
>sp|NSP2_ROTWI|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 4 YRVTLN 9
Y++TLN
Sbjct: 187 YKITLN 192
>sp|NSP2_ROTHW|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 4 YRVTLN 9
Y++TLN
Sbjct: 187 YKITLN 192
>sp|NSP2_ROTHT|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 4 YRVTLN 9
Y++TLN
Sbjct: 187 YKITLN 192
>sp|NSP2_ROTHL|NON-STRUCTURAL protein 2|Rotavirus A (strain
Query: 4 YRVTLN 9
Y++TLN
Sbjct: 187 YKITLN 192
>sp|NSP2_ROTAD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 4 YRVTLN 9
Y++TLN
Sbjct: 187 YKITLN 192
>sp|NSP2_ROTHP|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 4 YRVTLN 9
Y++TLN
Sbjct: 187 YKITLN 192
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 3 AYRVTLNP 10
AYR L+P
Sbjct: 430 AYRCVLHP 437
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 AAAYRVTLNP 10
A YRV NP
Sbjct: 870 APDYRVEQNP 879
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 AAAYRVTLNP 10
A YRV NP
Sbjct: 870 APDYRVEQNP 879
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 3 AYRVTLNP 10
AYR L+P
Sbjct: 430 AYRCVLHP 437
9|Sequence|41|50|VTLNPPGTFL
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 NPPGTFL 10
+PPG FL
Sbjct: 1586 DPPGEFL 1592
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 NPPGTFL 10
+PPG FL
Sbjct: 1586 DPPGEFL 1592
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 VTLNPPGT 8
VTL PGT
Sbjct: 992 VTLGSPGT 999
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 VTLNPPGT 8
+T PPGT
Sbjct: 1812 MTATPPGT 1819
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 3 LNPPGTFL 10
LNP TFL
Sbjct: 1368 LNPRKTFL 1375
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PPGTF 9
PPGTF
Sbjct: 309 PPGTF 313
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PPGTF 9
PPGTF
Sbjct: 309 PPGTF 313
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PPGTF 9
PPGTF
Sbjct: 309 PPGTF 313
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 5 PPGTFL 10
PPG FL
Sbjct: 439 PPGEFL 444
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 LNPPGTF 9
L PP TF
Sbjct: 2054 LRPPSTF 2060
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 LNPPGTF 9
L PP TF
Sbjct: 2053 LRPPSTF 2059
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 LNPPGTF 9
L PP TF
Sbjct: 2053 LRPPSTF 2059
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 2 TLNPPG 7
T+NPPG
Sbjct: 187 TINPPG 192
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 2 TLNPPG 7
T+NPPG
Sbjct: 187 TINPPG 192
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 2 TLNPPG 7
T+NPPG
Sbjct: 187 TINPPG 192
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 5 PPGTFL 10
PPG FL
Sbjct: 439 PPGEFL 444
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 3 LNPPGT 8
+NPPG+
Sbjct: 287 INPPGS 292
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 5 PPGTF 9
PPGT+
Sbjct: 48 PPGTY 52
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 5 PPGTF 9
PPGT+
Sbjct: 1226 PPGTY 1230
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 3 LNPPG 7
LNPPG
Sbjct: 294 LNPPG 298
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LNPPG 7
LNPPG
Sbjct: 294 LNPPG 298
>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /
Query: 5 PPGTF 9
PPGT+
Sbjct: 48 PPGTY 52
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 5 PPGTFL 10
PP TFL
Sbjct: 487 PPSTFL 492
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 LNPPGTF 9
L PPGT+
Sbjct: 197 LLPPGTY 203
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 LNPPGTF 9
L PPGT+
Sbjct: 197 LLPPGTY 203
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 LNPPGTF 9
L PPGT+
Sbjct: 197 LLPPGTY 203
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 LNPPGTF 9
L PPGT+
Sbjct: 197 LLPPGTY 203
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 LNPPGTF 9
L PPGT+
Sbjct: 197 LLPPGTY 203
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 3 LNPPGTF 9
L PPGT+
Sbjct: 197 LLPPGTY 203
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 VTLNPPGTF 9
+TLN G+F
Sbjct: 1914 ITLNSYGSF 1922
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 LNPPGTF 9
L PPGT+
Sbjct: 197 LLPPGTY 203
>sp|NCAP_CVHN1|NUCLEOPROTEIN coronavirus HKU1 (isolate N1)
Query: 5 PPGTFL 10
PPGT L
Sbjct: 176 PPGTIL 181
>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus
Query: 5 PPGTF 9
PPGT+
Sbjct: 48 PPGTY 52
>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate
Query: 5 PPGTF 9
PPGT+
Sbjct: 48 PPGTY 52
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 LNPPGTF 9
L PPGT+
Sbjct: 197 LLPPGTY 203
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 LNPPGTF 9
L PPGT+
Sbjct: 197 LLPPGTY 203
10|Sequence|46|55|PGTFLEGVAK
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 PGTFLEGVAK 10
PG + GVAK
Sbjct: 200 PGAYFPGVAK 209
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 3 TFLEGVAK 10
TFL+GV K
Sbjct: 494 TFLQGVPK 501
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 PGTFLEGVAK 10
P T+LEG +
Sbjct: 2965 PNTYLEGSVR 2974
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 PGTFLEGVAK 10
P T+LEG +
Sbjct: 2942 PNTYLEGSVR 2951
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PGTFLEGVAK 10
P T+LEG +
Sbjct: 2965 PNTYLEGSVR 2974
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PGTFLEGVAK 10
P T+LEG +
Sbjct: 2942 PNTYLEGSVR 2951
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 3 TFLEGVAK 10
TFL+G+ K
Sbjct: 475 TFLQGIPK 482
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 1 PGTFLEGVA 9
P TFL G+A
Sbjct: 377 PNTFLVGLA 385
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 GTFLEGVAK 10
G +EG+AK
Sbjct: 861 GVSVEGIAK 869
11|Sequence|51|60|EGVAKVGQYT
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 EGVAKVGQ 8
EG+AK+G+
Sbjct: 865 EGIAKIGE 872
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 EGVAKVGQ 8
EG+AK+G+
Sbjct: 865 EGIAKIGE 872
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 EGVAKVGQY 9
+G AKVG Y
Sbjct: 486 DGRAKVGNY 494
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 323 EGVAVLGTYS 332
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 323 EGVAVLGTYS 332
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 EGVAKVGQYT 10
EGVA +G Y+
Sbjct: 323 EGVAVLGTYS 332
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 EGVAKVG 7
EGV+K+G
Sbjct: 27 EGVSKIG 33
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 2 GVAKVGQY 9
GVA VG+Y
Sbjct: 522 GVAVVGRY 529
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GVAKVGQY 9
GVA VG Y
Sbjct: 476 GVAAVGAY 483
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GVAKVGQY 9
GVA VG Y
Sbjct: 476 GVAAVGAY 483
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GVAKVGQY 9
GVA VG+Y
Sbjct: 534 GVAIVGRY 541
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 2 GVAKVGQY 9
G+A VG+Y
Sbjct: 522 GIAVVGRY 529
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 2 GVAKVGQY 9
GVA +G Y
Sbjct: 468 GVAAIGTY 475
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 4 AKVGQY 9
KVGQY
Sbjct: 355 GKVGQY 360
>sp|VP2_POVKI|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 350)
Query: 1 EGVAKVGQY 9
EGV ++GQ+
Sbjct: 302 EGVHRLGQW 310
>sp|VP2_POVK6|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 60)
Query: 1 EGVAKVGQY 9
EGV ++GQ+
Sbjct: 302 EGVHRLGQW 310
>sp|VP2_POVK3|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 380)
Query: 1 EGVAKVGQY 9
EGV ++GQ+
Sbjct: 302 EGVHRLGQW 310
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 2 GVAKVGQY 9
G+A +G Y
Sbjct: 471 GIAAIGTY 478
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GVAKVGQY 9
G+A +G Y
Sbjct: 472 GIAAIGTY 479
12|Sequence|56|65|VGQYTFTAAA
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 4 YTFTAA 9
YTFTAA
Sbjct: 10 YTFTAA 15
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VGQYTF 6
+G+YTF
Sbjct: 5496 IGEYTF 5501
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VGQYTF 6
+G+YTF
Sbjct: 5519 IGEYTF 5524
13|Sequence|61|70|FTAAAVGAVF
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TAAAVGAVF 10
T AA+GAVF
Sbjct: 2894 TNAAMGAVF 2902
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TAAAVGAVF 10
T AA+GAVF
Sbjct: 2894 TNAAMGAVF 2902
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TAAAVGAVF 10
T AA+GAVF
Sbjct: 2894 TNAAMGAVF 2902
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TAAAVGAVF 10
T AA+GAVF
Sbjct: 2894 TNAAMGAVF 2902
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TAAAVGAVF 10
T AA+GAVF
Sbjct: 2894 TNAAMGAVF 2902
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2894 AAIGAVF 2900
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2894 AAIGAVF 2900
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2894 AAIGAVF 2900
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2894 AAIGAVF 2900
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2894 AAIGAVF 2900
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2899 AAIGAVF 2905
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2898 AAIGAVF 2904
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2899 AAIGAVF 2905
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FTAAAVGAV 9
FT+AAV AV
Sbjct: 1261 FTSAAVKAV 1269
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2936 AALGAVF 2942
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2936 AALGAVF 2942
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2936 AALGAVF 2942
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2936 AALGAVF 2942
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 4 AAVGAVF 10
AA+GAVF
Sbjct: 2927 AALGAVF 2933
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 TAAAVGAVF 10
TAA V A+F
Sbjct: 960 TAATVAAMF 968
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 TAAAVGAVF 10
TAA V A+F
Sbjct: 960 TAATVAAMF 968
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 TAAAVGAVF 10
TAA V A+F
Sbjct: 964 TAATVAAMF 972
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 4 AAVGAVF 10
AA+GA+F
Sbjct: 2928 AALGAIF 2934
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 4 AAVGAVF 10
AA+GA+F
Sbjct: 2928 AALGAIF 2934
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 4 AAVGAVF 10
AA+GA+F
Sbjct: 2924 AALGAIF 2930
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 AAVGAVF 10
AA+GA+F
Sbjct: 2929 AALGAIF 2935
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 AAVGAVF 10
AA+GA+F
Sbjct: 2898 AALGAIF 2904
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 AAVGAVF 10
AA+GA+F
Sbjct: 2895 AALGAIF 2901
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 AAVGAVF 10
AA+GA+F
Sbjct: 2898 AALGAIF 2904
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 AAVGAVF 10
AA+GA+F
Sbjct: 2898 AALGAIF 2904
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 AAVGAVF 10
AA+GA+F
Sbjct: 2898 AALGAIF 2904
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 AAVGAVF 10
AA+GA+F
Sbjct: 2898 AALGAIF 2904
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 AAVGAVF 10
AA+GA+F
Sbjct: 2898 AALGAIF 2904
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 AAVGAVF 10
AA+GA+F
Sbjct: 514 AAIGALF 520
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 2 TAAAVGAV 9
TAA +GAV
Sbjct: 4 TAARLGAV 11
14|Sequence|66|75|VGAVFGLTTC
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 5 FGLTTC 10
FG TTC
Sbjct: 193 FGFTTC 198
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 5 FGLTTC 10
FG TTC
Sbjct: 193 FGFTTC 198
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VGAVFGL 7
VG+VFGL
Sbjct: 54 VGSVFGL 60
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VGAVFGL 7
VG+VFGL
Sbjct: 54 VGSVFGL 60
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VGAVFGL 7
VG+VFGL
Sbjct: 54 VGSVFGL 60
>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain
Query: 3 AVFGLTTC 10
AVF L TC
Sbjct: 254 AVFHLKTC 261
>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AVFGLT 8
AVFGLT
Sbjct: 3 AVFGLT 8
>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 AVFGLT 8
AVFGLT
Sbjct: 3 AVFGLT 8
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 1 VGAVFGLTTC 10
+G ++G T C
Sbjct: 165 IGVIYGPTGC 174
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 1 VGAVFGLTTC 10
+G ++G T C
Sbjct: 168 IGVIYGPTGC 177
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 1 VGAVFGLTTC 10
+G ++G T C
Sbjct: 166 IGVIYGPTGC 175
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 1 VGAVFGLTTC 10
+G ++G T C
Sbjct: 166 IGVIYGPTGC 175
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 1 VGAVFGLTTC 10
+G ++G T C
Sbjct: 166 IGVIYGPTGC 175
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 AVFGLTTC 10
AVF + TC
Sbjct: 1211 AVFNMRTC 1218
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VGAVFG 6
+GAVFG
Sbjct: 469 LGAVFG 474
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VGAVFG 6
+GAVFG
Sbjct: 468 LGAVFG 473
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 GAVFGL 7
GA+FGL
Sbjct: 2342 GALFGL 2347
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VGAVFG 6
+GAVFG
Sbjct: 469 LGAVFG 474
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VGAVFG 6
+GAVFG
Sbjct: 468 LGAVFG 473
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 2 GAVFGLTT 9
GA++G+ T
Sbjct: 257 GAIYGIDT 264
>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GAVFGLTT 9
GA++G+ T
Sbjct: 257 GAIYGIDT 264
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 2 GAVFGLTT 9
GA++G+ T
Sbjct: 257 GAIYGIDT 264
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GAVFGL 7
GAVFG+
Sbjct: 348 GAVFGV 353
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GAVFGL 7
GAVFG+
Sbjct: 348 GAVFGV 353
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 AVFGLTTC 10
AVF + TC
Sbjct: 1211 AVFEMRTC 1218
15|Sequence|71|80|GLTTCISAHV
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 1 GLTTCIS 7
G+TTCIS
Sbjct: 132 GITTCIS 138
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GLTTCI 6
G+TTCI
Sbjct: 132 GITTCI 137
>sp|UL96_HCMVM|PROTEIN UL96|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 TTCISAHV 10
T C++AH+
Sbjct: 59 TQCVAAHL 66
>sp|UL96_HCMVA|PROTEIN UL96|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 TTCISAHV 10
T C++AH+
Sbjct: 59 TQCVAAHL 66
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LTTCISAHV 10
L TC +AH+
Sbjct: 817 LPTCTNAHM 825
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LTTCISAHV 10
L TC +AH+
Sbjct: 817 LPTCTNAHM 825
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LTTCISAHV 10
L TC +AH+
Sbjct: 817 LPTCTNAHM 825
>sp|VLTF1_VAR67|LATE transcription factor 1|Variola virus (isolate
Query: 1 GLTTCISAH 9
G CIS H
Sbjct: 157 GFIKCISQH 165
>sp|VLTF1_VACCC|LATE transcription factor 1|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GLTTCISAH 9
G CIS H
Sbjct: 157 GFIKCISQH 165
>sp|VLTF1_VACCA|LATE transcription factor 1|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GLTTCISAH 9
G CIS H
Sbjct: 157 GFIKCISQH 165
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 GLTTCISAHV 10
GLT C+S V
Sbjct: 398 GLTPCLSTTV 407
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 3 TTCISAH 9
T CIS H
Sbjct: 293 TVCISPH 299
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 3 TTCISAH 9
T CIS H
Sbjct: 293 TVCISPH 299
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 GLTTCISAHV 10
GLT C+S V
Sbjct: 398 GLTPCLSTTV 407
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 GLTTCISAHV 10
GLT C+S V
Sbjct: 398 GLTPCLSTTV 407
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 GLTTCISAHV 10
G+ C+ HV
Sbjct: 1956 GIPVCLGVHV 1965
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 GLTTCISAHV 10
G+ C+ HV
Sbjct: 1955 GIPVCLGVHV 1964
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 GLTTCISAHV 10
G+ C+ HV
Sbjct: 1955 GIPVCLGVHV 1964
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 TTCISAHV 10
+ C SAHV
Sbjct: 1805 SDCASAHV 1812
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 4 TCISAH 9
+CISAH
Sbjct: 633 SCISAH 638
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GLTTCI 6
GLT CI
Sbjct: 580 GLTQCI 585
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 TTCISAHV 10
+ C SAH+
Sbjct: 1808 SECASAHI 1815
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 GLTTCI 6
GLT CI
Sbjct: 580 GLTQCI 585
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 4 TCISAH 9
TC+S H
Sbjct: 702 TCVSEH 707
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 TCISAH 9
TC+S H
Sbjct: 702 TCVSEH 707
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 5 CISAHV 10
CIS H+
Sbjct: 249 CISIHI 254
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GLTTCISA 8
GLT C+++
Sbjct: 4283 GLTNCLAS 4290
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 LTTCISAHV 10
+ CIS H+
Sbjct: 246 IRNCISTHM 254
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LTTCIS 7
LTTC+S
Sbjct: 451 LTTCLS 456
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 2 LTTCIS 7
LTTC+S
Sbjct: 451 LTTCLS 456
>sp|K12_HHV8P|PROTEIN K12|Human herpesvirus 8 type P
Query: 1 GLTTCISAHV 10
GLT ++ HV
Sbjct: 4 GLTVFVAVHV 13
16|Sequence|76|85|ISAHVREKPD
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 4 HVREKPD 10
HV+ KPD
Sbjct: 469 HVKRKPD 475
>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)
Query: 5 VREKPD 10
+REKPD
Sbjct: 81 IREKPD 86
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 HVREKPD 10
HVR KP+
Sbjct: 480 HVRSKPN 486
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 HVREKPD 10
HVR KP+
Sbjct: 480 HVRTKPN 486
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 ISAHVRE 7
IS+HVR+
Sbjct: 663 ISSHVRD 669
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 HVREKP 9
HVR KP
Sbjct: 470 HVRTKP 475
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 4 HVREKP 9
+VREKP
Sbjct: 114 NVREKP 119
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 ISAHVRE 7
+ AHVRE
Sbjct: 765 VKAHVRE 771
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 ISAHVRE 7
+ AHVRE
Sbjct: 765 VKAHVRE 771
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 ISAHVRE 7
+ AHVRE
Sbjct: 765 VKAHVRE 771
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 ISAHVRE 7
+ AHVRE
Sbjct: 765 VKAHVRE 771
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 SAHVRE 7
SAHVR+
Sbjct: 1809 SAHVRQ 1814
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 ISAHVRE 7
+ AHVRE
Sbjct: 770 VKAHVRE 776
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 ISAHVRE 7
+ AHVRE
Sbjct: 770 VKAHVRE 776
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ISAHVREKPD 10
+ AH E+P+
Sbjct: 492 VEAHGHEQPE 501
17|Sequence|81|90|REKPDDPLNY
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 REKPDD 6
RE+PDD
Sbjct: 176 REEPDD 181
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 REKPDD 6
RE+PDD
Sbjct: 176 REEPDD 181
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 REKPDD 6
RE+PDD
Sbjct: 176 REEPDD 181
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 REKPDD 6
RE+PDD
Sbjct: 176 REEPDD 181
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 REKPDD 6
RE+PDD
Sbjct: 176 REEPDD 181
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 REKPDD 6
RE+PDD
Sbjct: 176 REEPDD 181
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 REKPDD 6
RE+PDD
Sbjct: 176 REEPDD 181
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 REKPDD 6
RE+PDD
Sbjct: 176 REEPDD 181
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 REKPDD 6
RE+PDD
Sbjct: 176 REEPDD 181
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 REKPDD 6
RE+PDD
Sbjct: 176 REEPDD 181
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 KPDDPLN 9
+PDDP N
Sbjct: 223 RPDDPTN 229
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 KPDDPLN 9
+PDDP N
Sbjct: 223 RPDDPTN 229
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 3 KPDDPL 8
KPD PL
Sbjct: 212 KPDSPL 217
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 2 EKPDDP 7
E PDDP
Sbjct: 196 ETPDDP 201
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 REKPDDPL 8
+ KPD P+
Sbjct: 471 KRKPDQPI 478
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 250 KPNDAINF 257
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 250 KPNDAINF 257
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 250 KPNDAINF 257
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 250 KPNDAINF 257
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 250 KPNDAINF 257
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 250 KPNDAINF 257
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 242 KPNDAINF 249
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 250 KPNDAINF 257
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 250 KPNDAINF 257
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 250 KPNDAINF 257
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 4 PDDPLNY 10
DDP+N+
Sbjct: 2078 SDDPMNF 2084
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 250 KPNDAINF 257
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 239 KPNDAINF 246
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 248 KPNDAINF 255
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 4 PDDPLNY 10
DDP+N+
Sbjct: 2078 SDDPMNF 2084
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 239 KPNDAINF 246
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 239 KPNDAINF 246
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 239 KPNDAINF 246
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 250 KPNDAINF 257
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 3 KPDDPL 8
+PDDP+
Sbjct: 384 RPDDPV 389
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 3 KPDDPLNY 10
KP+D +N+
Sbjct: 246 KPNDAINF 253
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 3 KPDDPL 8
+PDDP+
Sbjct: 384 RPDDPV 389
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 2 EKPDDPLNY 10
E PDD L +
Sbjct: 906 EAPDDELRF 914
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 EKPDDPLN 9
E P DPLN
Sbjct: 2049 ESPCDPLN 2056
>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)
Query: 1 REKPD 5
REKPD
Sbjct: 82 REKPD 86
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 EKPDDPLN 9
E P DPLN
Sbjct: 2027 ESPCDPLN 2034
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 EKPDDPLN 9
E P DPLN
Sbjct: 2022 ESPCDPLN 2029
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 3 KPDDPLN 9
+ DDPLN
Sbjct: 239 RQDDPLN 245
18|Sequence|86|95|DPLNYFLGGC
>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)
Query: 3 LNYFLG 8
LNYFLG
Sbjct: 35 LNYFLG 40
>sp|UL24_HHV6U|PROTEIN UL24 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LNYFLG 8
LNYFLG
Sbjct: 35 LNYFLG 40
>sp|UL24_HHV6G|PROTEIN UL24 homolog|Human herpesvirus 6A (strain GS)
Query: 3 LNYFLG 8
LNYFLG
Sbjct: 35 LNYFLG 40
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 DPLNYFLGG 9
+ LNY LGG
Sbjct: 914 EKLNYTLGG 922
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 DPLNYFLGG 9
+ LNY LGG
Sbjct: 914 EKLNYTLGG 922
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DPLNYFLGG 9
+ LNY LGG
Sbjct: 914 EKLNYTLGG 922
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DPLNYFLGG 9
+ LNY LGG
Sbjct: 914 EKLNYTLGG 922
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 DPLNYFLGG 9
+ LNY LGG
Sbjct: 914 EKLNYTLGG 922
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 DPLNYF 6
DP++YF
Sbjct: 1316 DPIDYF 1321
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 DPLNYF 6
DP++YF
Sbjct: 1316 DPIDYF 1321
>sp|UL24_HHV7J|PROTEIN UL24 homolog|Human herpesvirus 7 (strain JI)
Query: 1 DPLNYFLG 8
+ LN+FLG
Sbjct: 33 EKLNFFLG 40
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 2 PLNYF 6
P+NYF
Sbjct: 557 PMNYF 561
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 DPLNYFL 7
+PLN+F+
Sbjct: 467 NPLNHFI 473
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 1 DPLNYFLGG 9
DP+N +GG
Sbjct: 416 DPVNCTIGG 424
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 DPLNYFL 7
+P NYF+
Sbjct: 233 EPYNYFV 239
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 PLNYFLG 8
P N+F G
Sbjct: 582 PFNFFYG 588
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 PLNYFLG 8
P N+F G
Sbjct: 582 PFNFFYG 588
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 PLNYFLGGC 10
P +YF GC
Sbjct: 283 PPHYFTLGC 291
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 PLNYFLGGC 10
P +YF GC
Sbjct: 283 PPHYFTLGC 291
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 3 LNYFLG 8
L YFLG
Sbjct: 162 LKYFLG 167
>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate
Query: 3 LNYFLG 8
L YFLG
Sbjct: 162 LKYFLG 167
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 3 LNYFLG 8
L YFLG
Sbjct: 162 LKYFLG 167
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LNYFLG 8
L YFLG
Sbjct: 162 LKYFLG 167
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 3 LNYFLG 8
L YFLG
Sbjct: 162 LKYFLG 167
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 3 LNYFLG 8
L YFLG
Sbjct: 162 LKYFLG 167
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 3 LNYFLG 8
L YFLG
Sbjct: 162 LKYFLG 167
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 3 LNYFLG 8
L YFLG
Sbjct: 162 LKYFLG 167
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 PLNYFLG 8
P N++LG
Sbjct: 1126 PQNFYLG 1132
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 PLNYFLG 8
P N++LG
Sbjct: 1126 PQNFYLG 1132
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 5 YFLGGC 10
YF+ GC
Sbjct: 4246 YFIKGC 4251
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 5 YFLGGC 10
YF+ GC
Sbjct: 4266 YFIKGC 4271
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 5 YFLGGC 10
YF+ GC
Sbjct: 4296 YFIKGC 4301
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 YFLGGC 10
YF+ GC
Sbjct: 4208 YFVKGC 4213
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 YFLGGC 10
YF+ GC
Sbjct: 4246 YFIKGC 4251
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 YFLGGC 10
YF+ GC
Sbjct: 4296 YFIKGC 4301
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 YFLGGC 10
YF+ GC
Sbjct: 712 YFIFGC 717
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 YFLGGC 10
YF+ GC
Sbjct: 4266 YFIKGC 4271
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 3 LNYFLGG 9
L+Y LGG
Sbjct: 234 LSYVLGG 240
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 YFLGGC 10
YF+ GC
Sbjct: 4208 YFVKGC 4213
19|Sequence|91|100|FLGGCAGGLT
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 GGCAGG 8
GGCAGG
Sbjct: 1307 GGCAGG 1312
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GGCAGGL 9
GGCAGG+
Sbjct: 162 GGCAGGV 168
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1311 GGCSGG 1316
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1309 GGCSGG 1314
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1307 GGCSGG 1312
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1307 GGCSGG 1312
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1304 GGCSGG 1309
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1305 GGCSGG 1310
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1307 GGCSGG 1312
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1307 GGCSGG 1312
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1308 GGCSGG 1313
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1301 GGCSGG 1306
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1309 GGCSGG 1314
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1308 GGCSGG 1313
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1308 GGCSGG 1313
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1304 GGCSGG 1309
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1304 GGCSGG 1309
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GGCAGG 8
GGC+GG
Sbjct: 1303 GGCSGG 1308
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 3 GGCAGG 8
GGC GG
Sbjct: 130 GGCRGG 135
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 3 GGCAGG 8
GGC GG
Sbjct: 130 GGCRGG 135
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 GGCAGG 8
GGC GG
Sbjct: 1303 GGCPGG 1308
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 LGGCAGGL 9
LGG GGL
Sbjct: 1245 LGGVMGGL 1252
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 LGGCAGGL 9
LGG GGL
Sbjct: 1245 LGGMMGGL 1252
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 LGGCAGGL 9
LGG GGL
Sbjct: 1245 LGGMMGGL 1252
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 LGGCAGGL 9
LGG GGL
Sbjct: 1245 LGGMMGGL 1252
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 LGGCAGGL 9
LGG GGL
Sbjct: 1245 LGGMMGGL 1252
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 LGGCAGGL 9
LGG GGL
Sbjct: 1245 LGGMMGGL 1252
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 LGGCAGGL 9
LGG GGL
Sbjct: 1245 LGGMMGGL 1252
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 LGGCAGGL 9
LGG GGL
Sbjct: 1245 LGGMMGGL 1252
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 LGGCAGGL 9
LGG GGL
Sbjct: 1245 LGGMMGGL 1252
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FLGGCAG 7
FLG C G
Sbjct: 74 FLGTCRG 80
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FLGGCAG 7
FLG C G
Sbjct: 74 FLGTCRG 80
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 3 GGCAGGL 9
G C GGL
Sbjct: 145 GPCPGGL 151
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 3 GGCAGGL 9
G C GGL
Sbjct: 145 GPCPGGL 151
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 3 GGCAGGL 9
GC GG
Sbjct: 33 AGCGGGF 39
>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 GGCAGGL 9
GG GGL
Sbjct: 25 GGACGGL 31
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GCAGG 8
GC GG
Sbjct: 201 GCTGG 205
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GCAGG 8
GC GG
Sbjct: 201 GCTGG 205
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 2 LGGCAGGLT 10
+GG +GG T
Sbjct: 148 VGGVSGGPT 156
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 5 CAGGLT 10
C GG+T
Sbjct: 384 CTGGVT 389
20|Sequence|96|105|AGGLTLGART
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 GGLTLGA 8
GGLTL A
Sbjct: 1233 GGLTLAA 1239
Query: 2 GGLTLGART 10
GG GART
Sbjct: 237 GGANEGART 245
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 GGLTLGA 8
GGLTL A
Sbjct: 1233 GGLTLAA 1239
Query: 2 GGLTLGART 10
GG GART
Sbjct: 237 GGANEGART 245
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 GGLTLGART 10
GG GART
Sbjct: 239 GGANEGART 247
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 GGLTLGART 10
GG GART
Sbjct: 239 GGANEGART 247
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 GGLTLGART 10
GG GART
Sbjct: 230 GGANEGART 238
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 GGLTLGART 10
GG GART
Sbjct: 230 GGANEGART 238
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 GGLTLGART 10
GG GART
Sbjct: 230 GGANEGART 238
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 GGLTLGART 10
GG GART
Sbjct: 222 GGANEGART 230
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 GGLTLGART 10
GG GART
Sbjct: 230 GGANEGART 238
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 GGLTLGART 10
GG+ G+RT
Sbjct: 243 GGVNEGSRT 251
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 GGLTLGART 10
GG+ G+RT
Sbjct: 243 GGVNEGSRT 251
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 GGLTLGART 10
GG+ G+RT
Sbjct: 242 GGVNEGSRT 250
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 GGLTLGART 10
GG+ G+RT
Sbjct: 242 GGVNEGSRT 250
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 GGLTLGART 10
GG+ G+RT
Sbjct: 243 GGVNEGSRT 251
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 GGLTLGART 10
GG+ G+RT
Sbjct: 243 GGVNEGSRT 251
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GGLTLGART 10
GG+ G+RT
Sbjct: 229 GGVNEGSRT 237
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GGLTLGART 10
GG+ G+RT
Sbjct: 228 GGVNEGSRT 236
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 GGLTLGART 10
GG+ G+RT
Sbjct: 227 GGVNEGSRT 235
21|Sequence|101|110|LGARTHNYGI
>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3
Query: 1 LGARTHNY 8
LGAR H Y
Sbjct: 317 LGARVHYY 324
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 RTHNYGI 10
RT NYG+
Sbjct: 49 RTQNYGM 55
>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 RTHNYGI 10
RT NYG+
Sbjct: 49 RTQNYGM 55
>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 4 RTHNYGI 10
RT NYG+
Sbjct: 49 RTQNYGM 55
>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 RTHNYGI 10
RT NYG+
Sbjct: 49 RTQNYGM 55
>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 4 RTHNYGI 10
+T NYGI
Sbjct: 49 KTQNYGI 55
>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 RTHNYGI 10
+T NYGI
Sbjct: 49 KTQNYGI 55
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 1 LGARTH 6
+GARTH
Sbjct: 346 IGARTH 351
>sp|VL2_HPV67|MINOR capsid protein L2|Human papillomavirus 67
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 318 IGARVHYY 325
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 313 IGARVHYY 320
>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 313 IGARVHYY 320
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 313 IGARVHYY 320
>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 318 IGARVHYY 325
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 315 IGARVHYY 322
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 317 IGARVHYY 324
>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 313 IGARVHYY 320
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 313 IGARVHYY 320
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 317 IGARVHYY 324
>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 317 IGARVHYY 324
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 317 IGARVHYY 324
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 318 IGARIHYY 325
>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 317 IGARVHFY 324
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 311 IGARVHFY 318
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 316 IGARVHFY 323
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 315 IGARVHFY 322
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 314 IGARVHFY 321
>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 313 IGARVHFY 320
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 RTHNYGI 10
+T NYG+
Sbjct: 49 KTQNYGV 55
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 ARTHNYG 9
++TH YG
Sbjct: 355 SKTHKYG 361
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 ARTHN 7
ARTHN
Sbjct: 1303 ARTHN 1307
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 ARTHN 7
ARTHN
Sbjct: 1303 ARTHN 1307
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 ARTHN 7
ARTHN
Sbjct: 1303 ARTHN 1307
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 GARTH 6
GARTH
Sbjct: 567 GARTH 571
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 GARTH 6
GARTH
Sbjct: 598 GARTH 602
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 ARTHNYG 9
++TH YG
Sbjct: 370 SKTHKYG 376
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 1 LGARTHNY 8
+GAR H Y
Sbjct: 316 IGARGHYY 323
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LGARTHNYGI 10
LG+ T N GI
Sbjct: 2749 LGSGTRNIGI 2758
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LGARTHNYGI 10
LG+ T N GI
Sbjct: 2746 LGSGTRNIGI 2755
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LGARTHNYGI 10
LG+ T N GI
Sbjct: 2749 LGSGTRNIGI 2758
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LGARTHNYGI 10
LG+ T N GI
Sbjct: 2749 LGSGTRNIGI 2758
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 LGARTHNYGI 10
LG+ T N GI
Sbjct: 2749 LGSGTRNIGI 2758
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LGARTHNYGI 10
LG+ T N GI
Sbjct: 2749 LGSGTRNIGI 2758
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LGARTHNYGI 10
LG+ T N GI
Sbjct: 2749 LGSGTRNIGI 2758
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 RTHNYGI 10
RTH +GI
Sbjct: 779 RTHLWGI 785
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 HNYG 9
HNYG
Sbjct: 246 HNYG 249
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 HNYG 9
HNYG
Sbjct: 246 HNYG 249
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 HNYG 9
HNYG
Sbjct: 246 HNYG 249
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 4 RTHNY 8
+THNY
Sbjct: 939 QTHNY 943
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 4 RTHNY 8
+THNY
Sbjct: 939 QTHNY 943
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 1 LGARTHNY 8
+GA+ H Y
Sbjct: 315 IGAKVHYY 322
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 1 LGARTHNY 8
+GA+ H Y
Sbjct: 318 IGAKVHYY 325
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 1 LGARTHNY 8
+GA+ H Y
Sbjct: 320 IGAKVHYY 327
22|Sequence|106|115|HNYGIGAAAC
>sp|IR01_HCMVA|UNCHARACTERIZED protein HKLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HNYGIGAA 8
HN G GAA
Sbjct: 100 HNIGEGAA 107
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HNYGIGAA 8
HN G GAA
Sbjct: 100 HNIGEGAA 107
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 NYGIGAAAC 10
N IG+A C
Sbjct: 144 NVNIGSAGC 152
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 NYGIG 6
NYGIG
Sbjct: 733 NYGIG 737
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 HNYGIGAA 8
HN G+G A
Sbjct: 240 HNAGMGVA 247
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 HNYGIGAA 8
HN G+G A
Sbjct: 612 HNAGMGIA 619
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 4 GIGAAAC 10
G G AAC
Sbjct: 688 GCGGAAC 694
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 YGIGAA 8
YGIG+A
Sbjct: 703 YGIGSA 708
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 1 HNYGIGA 7
HN G GA
Sbjct: 318 HNKGTGA 324
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 YGIGAA 8
YGIG+A
Sbjct: 703 YGIGSA 708
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 YGIGAA 8
YGIG+A
Sbjct: 703 YGIGSA 708
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 YGIGAA 8
YGIG+A
Sbjct: 703 YGIGSA 708
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 HNYGIGAAA 9
H+Y +GA A
Sbjct: 2097 HHYIVGATA 2105
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 YGIGAA 8
YGIG+A
Sbjct: 703 YGIGSA 708
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 HNYGIG 6
+NYG+G
Sbjct: 814 NNYGLG 819
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 YGIGAA 8
YGIG+A
Sbjct: 703 YGIGSA 708
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 HNYGIGAAA 9
HN G G+ A
Sbjct: 308 HNQGYGSHA 316
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 1 HNYGIGAA 8
+N+ +GAA
Sbjct: 240 YNFSLGAA 247
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 HNYGIGAA 8
+N+ +GAA
Sbjct: 240 YNFSLGAA 247
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 HNYGIGAA 8
+N+ +GAA
Sbjct: 244 YNFSLGAA 251
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 1 HNYGIGAA 8
+N+ +GAA
Sbjct: 244 YNFSLGAA 251
23|Sequence|111|120|GAAACVYFGI
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 AACVYF 8
+ACVYF
Sbjct: 639 SACVYF 644
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 AACVYF 8
+ACVYF
Sbjct: 641 SACVYF 646
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 AACVYF 8
+ACVYF
Sbjct: 641 SACVYF 646
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GAAACVYFGI 10
G C YFG+
Sbjct: 3764 GYCCCCYFGL 3773
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4300 GASCCLY 4306
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GAAACVYFGI 10
G C YFG+
Sbjct: 3764 GYCCCCYFGL 3773
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4300 GASCCLY 4306
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 AACVYFG 9
+ACVY G
Sbjct: 640 SACVYMG 646
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 GAAACVYFGI 10
GAA VY GI
Sbjct: 2294 GAAWTVYVGI 2303
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 GAAACVYFGI 10
GAA VY GI
Sbjct: 2293 GAAWTVYVGI 2302
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 GAAACVYFGI 10
GAA VY GI
Sbjct: 2294 GAAWTVYVGI 2303
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GAAACVYFGI 10
GAA VY GI
Sbjct: 2293 GAAWTVYVGI 2302
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 GAAACVYFGI 10
GAA VY GI
Sbjct: 2293 GAAWTVYVGI 2302
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 GAAACVYFGI 10
GAA VY GI
Sbjct: 2294 GAAWTVYVGI 2303
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GAAACVYFGI 10
GAA VY GI
Sbjct: 2293 GAAWTVYVGI 2302
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 GAAACVYFGI 10
GAA VY GI
Sbjct: 2293 GAAWTVYVGI 2302
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 GAAACVYFGI 10
GAA VY GI
Sbjct: 2293 GAAWTVYVGI 2302
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GAAACVYFGI 10
G +C+Y+G+
Sbjct: 3474 GFVSCMYYGL 3483
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4003 GASVCIY 4009
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 AACVYFG 9
A C YFG
Sbjct: 137 ATCRYFG 143
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 GAAACVY 7
G +ACVY
Sbjct: 637 GRSACVY 643
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 GAAACVYFGI 10
G +C+Y+G+
Sbjct: 3474 GFVSCMYYGL 3483
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4003 GASVCIY 4009
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 GAAACVYFGI 10
G AC Y G+
Sbjct: 1684 GLKACCYVGV 1693
Query: 3 AACVYF 8
+ACVY+
Sbjct: 2529 SACVYY 2534
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4307 GASVCLY 4313
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GAAACVYFGI 10
G AC Y G+
Sbjct: 1684 GLKACCYVGV 1693
Query: 3 AACVYF 8
+ACVY+
Sbjct: 2529 SACVYY 2534
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4307 GASVCLY 4313
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 3 AACVYFG 9
AAC Y G
Sbjct: 151 AACSYLG 157
>sp|VU26_HHV6Z|PROTEIN U26|Human herpesvirus 6B (strain Z29)
Query: 5 CVYFGI 10
C+YFG+
Sbjct: 290 CMYFGV 295
>sp|VU26_HHV6H|PROTEIN U26|Human herpesvirus 6B (HHV-6 variant
Query: 5 CVYFGI 10
C+YFG+
Sbjct: 290 CMYFGV 295
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 AACVYFG 9
+ACVY+
Sbjct: 641 SACVYYA 647
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 AAACVY 7
AAACV+
Sbjct: 2688 AAACVF 2693
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 AAACVY 7
AAACV+
Sbjct: 2688 AAACVF 2693
>sp|VU26_HHV6U|PROTEIN U26|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 CVYFGI 10
C+YFG+
Sbjct: 290 CMYFGV 295
>sp|VU26_HHV6G|PROTEIN U26|Human herpesvirus 6A (strain GS)
Query: 5 CVYFGI 10
C+YFG+
Sbjct: 290 CMYFGV 295
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 ACVYF 8
ACVYF
Sbjct: 2279 ACVYF 2283
Query: 1 GAAACVYFGI 10
G C Y+GI
Sbjct: 3449 GYLVCTYWGI 3458
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 AACVYF 8
+ACVY+
Sbjct: 639 SACVYY 644
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 AACVY 7
AACVY
Sbjct: 639 AACVY 643
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4390 GASVCIY 4396
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 GAAACVYFGI 10
GAA VY G+
Sbjct: 2286 GAAWTVYVGL 2295
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4340 GASVCIY 4346
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4360 GASVCIY 4366
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4302 GASVCIY 4308
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 ACVYF 8
ACVYF
Sbjct: 2279 ACVYF 2283
Query: 1 GAAACVYFGI 10
G C Y+GI
Sbjct: 3449 GYLVCTYWGI 3458
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4390 GASVCIY 4396
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4302 GASVCIY 4308
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4360 GASVCIY 4366
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4340 GASVCIY 4346
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 3 AACVYF 8
A C+YF
Sbjct: 63 AGCLYF 68
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 3 AACVYF 8
A C+YF
Sbjct: 63 AGCLYF 68
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4323 GASCCLY 4329
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GAAACVY 7
GA+ C+Y
Sbjct: 4323 GASCCLY 4329
24|Sequence|116|125|VYFGIAASLV
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 VYFGIAAS 8
V+FGIA S
Sbjct: 224 VHFGIAQS 231
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 1 VYFGIAAS 8
V+FGIA S
Sbjct: 224 VHFGIAQS 231
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 1 VYFGIAAS 8
V+FGIA S
Sbjct: 224 VHFGIAQS 231
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 VYFGIAAS 8
V+FGIA S
Sbjct: 224 VHFGIAQS 231
>sp|HEMA_VAR67|PROTEIN OPG185|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 FGIAASLV 10
FGIAA ++
Sbjct: 279 FGIAALII 286
25|Sequence|121|130|AASLVKMGRL
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 AASLVKMG 8
AASLVK+G
Sbjct: 363 AASLVKIG 370
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 SLVKMGRL 10
SL+K GRL
Sbjct: 6703 SLIKSGRL 6710
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 AASLVKMGR 9
AAS+ ++GR
Sbjct: 834 AASITRIGR 842
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 AASLVKMGR 9
AAS+ ++GR
Sbjct: 834 AASITRIGR 842
26|Sequence|126|135|KMGRLEGWEV
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 KMGRLEGWE 9
KMG EG E
Sbjct: 3836 KMGNFEGQE 3844
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 5 LEGWEV 10
LEGW +
Sbjct: 405 LEGWNI 410
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KMGRLEGWEV 10
+MGR G+EV
Sbjct: 148 EMGRQFGFEV 157
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KMGRLEGWEV 10
+MGR G+EV
Sbjct: 148 EMGRQFGFEV 157
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 KMGRLEGWEV 10
+MGR G+EV
Sbjct: 148 EMGRQFGFEV 157
>sp|VP24_EBORR|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 5 LEGWEV 10
L+GW+V
Sbjct: 35 LQGWKV 40
>sp|VP24_EBORE|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 5 LEGWEV 10
L+GW+V
Sbjct: 35 LQGWKV 40
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 1 KMGRLEG 7
K+G+LEG
Sbjct: 334 KVGQLEG 340
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 KMGRLEG 7
K+G+LEG
Sbjct: 333 KVGQLEG 339
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 KMGRLEG 7
K+G+LEG
Sbjct: 334 KVGQLEG 340
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDSWE 17
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|VPU_HV1A2|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 KMGRLEGWEV 10
+MG L W+V
Sbjct: 69 EMGHLAPWDV 78
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDAWE 17
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 4 RLEGWEV 10
++EGW V
Sbjct: 91 KVEGWVV 97
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDDWE 17
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDDWE 17
>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 GRLEGW 8
GRLE W
Sbjct: 17 GRLEKW 22
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GRLEGWE 9
G+L+ WE
Sbjct: 11 GKLDSWE 17
27|Sequence|131|141|EGWEVFAKPKV
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 EGWEVFAKPKV 11
E WE FAK +
Sbjct: 2062 EYWEEFAKKPI 2072
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 2 GWEVFAKPK 10
GW FAK +
Sbjct: 1054 GWLTFAKER 1062
>sp|PAX_I30A0|PROTEIN PA-X|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 3 WEVFAKPK 10
W+ FA P+
Sbjct: 188 WDSFASPR 195
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 EGWEVFAKPKV 11
+G E F KP +
Sbjct: 2011 KGCETFGKPVI 2021
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 EGWEVFAKPKV 11
+G E F KP +
Sbjct: 2031 KGCETFGKPVI 2041
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 EGWEVFAKPKV 11
+G E F KP +
Sbjct: 2061 KGCETFGKPVI 2071
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 EGWEVFAKPKV 11
+G E F KP +
Sbjct: 2011 KGCETFGKPVI 2021
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 EGWEVFAKPKV 11
+G E F KP +
Sbjct: 2031 KGCETFGKPVI 2041
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 EGWEVFAKPKV 11
+G E F KP +
Sbjct: 2061 KGCETFGKPVI 2071
>sp|TEG3_HHV11|TEGUMENT protein UL14|Human herpesvirus 1 (strain 17)
Query: 3 WEVFAKPKV 11
W++ + PKV
Sbjct: 151 WQLTSAPKV 159
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 EGWEVFAKPKV 11
E WE FA+ +
Sbjct: 2138 EYWEEFARKPI 2148
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 EGWEVFAKPKV 11
E WE FA+ +
Sbjct: 2140 EYWEEFARKPI 2150
>sp|PAX_I72A2|PROTEIN PA-X|Influenza A virus (strain A/Udorn/307/1972
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I68A5|PROTEIN PA-X|Influenza A virus (strain A/Korea/426/1968
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I09A0|PROTEIN PA-X|Influenza A virus (strain swl
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I77A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I68A6|PROTEIN PA-X|Influenza A virus (strain A/Northern
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I68A4|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I67A0|PROTEIN PA-X|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 EGWEVFAKPKV 11
E WE +AK +
Sbjct: 2054 EYWEEYAKQPI 2064
>sp|PAX_I93A0|PROTEIN PA-X|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I83A8|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I80A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/4/1980
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I57A5|PROTEIN PA-X|Influenza A virus (strain A/Singapore/1/1957
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I03A2|PROTEIN PA-X|Influenza A virus (strain A/wyoming/03/2003
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I78A8|PROTEIN PA-X|Influenza A virus (strain A/Memphis/18/1978
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I78A7|PROTEIN PA-X|Influenza A virus (strain A/Memphis/2/1978
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I76A6|PROTEIN PA-X|Influenza A virus (strain A/Memphis/110/1976
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I75A0|PROTEIN PA-X|Influenza A virus (strain A/Beijing/39/1975
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I01A0|PROTEIN PA-X|Influenza A virus (strain A/Silky
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVNPK 195
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 3 WEVFAKPKV 11
W++ + PKV
Sbjct: 151 WQLTSAPKV 159
>sp|PAX_I73A5|PROTEIN PA-X|Influenza A virus (strain A/Port
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I72A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/101/1972
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I72A3|PROTEIN PA-X|Influenza A virus (strain A/Memphis/102/1972
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I71A1|PROTEIN PA-X|Influenza A virus (strain A/Memphis/1/1971
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I70A0|PROTEIN PA-X|Influenza A virus (strain A/Qu/7/1970
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I69A0|PROTEIN PA-X|Influenza A virus (strain A/England/878/1969
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I02A4|PROTEIN PA-X|Influenza A virus (strain A/Silky
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I02A2|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I57A0|PROTEIN PA-X|Influenza A virus (strain A/Japan/305/1957
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I00A1|PROTEIN PA-X|Influenza A virus (strain A/New
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I96A3|PROTEIN PA-X|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I57A1|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I07A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I57A3|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I57A2|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFVSPK 195
>sp|PAX_I60A0|PROTEIN PA-X|Influenza A virus (strain A/Ann
Query: 3 WEVFAKPK 10
W+ F PK
Sbjct: 188 WDSFISPK 195