NDUA8_HUMAN Blast Output
Archaea
1|Sequence|1|10|MPGIVELPTL

>sp|RISB_PYRAR|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 MPGIVELPTL 10
+PG+ ++PTL
Sbjct: 40 VPGVYDIPTL 49


>sp|NADE_METB6|NH(3)-DEPENDENT NAD(+) synthetase|Methanoregula boonei (strain DSM 21154

Query: 1 MPGIVELPTL 10
+PG VE P L
Sbjct: 98 IPGFVETPYL 107


>sp|PIP_THEVO|PROLINE iminopeptidase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GIVELPTL 10
GI+ +PTL
Sbjct: 232 GIISVPTL 239


>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGIVELP 8
PG VE+P
Sbjct: 170 PGFVEVP 176


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC

Query: 1 MPGIVELP 8
MP I++LP
Sbjct: 1 MPSILDLP 8


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 MPGIVELP 8
+PG ELP
Sbjct: 417 LPGTAELP 424


>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 PGIVELPT 9
P +VELP+
Sbjct: 301 PAVVELPS 308


>sp|Y706_METJA|UNCHARACTERIZED protein MJ0706|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GIVELPTL 10
GI+E+P L
Sbjct: 140 GIIEIPAL 147


>sp|NARB_HALMT|PUTATIVE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 2 PGIVELPTL 10
PGI + PTL
Sbjct: 114 PGIEKAPTL 122


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GIVELPTL 10
GIVE PT+
Sbjct: 24 GIVETPTV 31




2|Sequence|6|15|ELPTLEELKV

>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ELPTLEELKV 10
+LPT +ELK+
Sbjct: 280 KLPTFDELKI 289


>sp|RNH2_THEKO|RIBONUCLEASE HII|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LPTLEELKV 10
LP LEELKV
Sbjct: 30 LPKLEELKV 38


>sp|DUT_ARCFU|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Archaeoglobus

Query: 1 ELPTLEELK 9
ELP LEE++
Sbjct: 58 ELPELEEVE 66


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 1 ELPTLEELK 9
+LPTLE+L+
Sbjct: 4 KLPTLEDLR 12


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 LPTLEELK 9
LPTLE++K
Sbjct: 331 LPTLEDIK 338


>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 ELPTLEE 7
ELP+LEE
Sbjct: 45 ELPSLEE 51


>sp|Y2134_ARCFU|UNCHARACTERIZED protein AF_2134|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPTLEELKV 10
+PT+ ELKV
Sbjct: 17 IPTIAELKV 25


>sp|TRPC_PYRAB|INDOLE-3-GLYCEROL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 ELPTLEELKV 10
E+ TLEELK+
Sbjct: 131 EVHTLEELKI 140


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 2 LPTLEELK 9
LPT EELK
Sbjct: 400 LPTDEELK 407


>sp|PGK_PYRWO|PHOSPHOGLYCERATE kinase|Pyrococcus woesei

Query: 1 ELPTLEELKV 10
+LP LE LK+
Sbjct: 391 KLPVLEALKI 400


>sp|PGK_PYRFU|PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELPTLEELKV 10
+LP LE LK+
Sbjct: 391 KLPVLEALKI 400


>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC

Query: 2 LPTLEELKV 10
+P LEEL V
Sbjct: 28 MPALEELDV 36


>sp|PGK_THEKO|PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ELPTLEELKV 10
ELP L+ LK+
Sbjct: 391 ELPVLKALKI 400


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 ELPTLEELKV 10
+LP+L ELK
Sbjct: 168 KLPSLSELKA 177


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 LPTLEELK 9
LPTLE +K
Sbjct: 351 LPTLEGMK 358


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LPTLEELK 9
LP+LE++K
Sbjct: 331 LPSLEDIK 338


>sp|Y1384_METJA|PUTATIVE nitroreductase MJ1384|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ELPTLEELK 9
+LP +EE+K
Sbjct: 8 QLPDIEEIK 16




3|Sequence|11|20|EELKVDEVKI

>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EELKVDEVK 9
+ELK+DEV+
Sbjct: 543 DELKLDEVR 551


>sp|PGK1_METAC|PHOSPHOGLYCERATE kinase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EELKVDEVK 9
EE+KVD++K
Sbjct: 292 EEVKVDKIK 300


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EELKVDEV 8
E LKVDEV
Sbjct: 117 ESLKVDEV 124


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EELKVDEV 8
E LKVDEV
Sbjct: 117 ESLKVDEV 124


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EELKVDEV 8
E LKVDEV
Sbjct: 117 ESLKVDEV 124


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 EELKVDEV 8
E LKVDEV
Sbjct: 117 ESLKVDEV 124


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EELKVDEV 8
E LKVDEV
Sbjct: 117 ESLKVDEV 124


>sp|AMT1_METJA|AMMONIUM transporter Amt1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EELKVDEV 8
E+LK+D+V
Sbjct: 295 EKLKIDDV 302


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 ELKVDEVKI 10
E+KVDE KI
Sbjct: 350 EIKVDEKKI 358


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 EELKVDEVK 9
EEL VD++K
Sbjct: 481 EELSVDKLK 489




4|Sequence|16|25|DEVKISSAVL

>sp|THI4_SULTO|THIAMINE thiazole synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DEVKISSAVL 10
DEVKIS +L
Sbjct: 12 DEVKISKYIL 21




5|Sequence|21|30|SSAVLKAAAH

>sp|ARGB_METAR|ACETYLGLUTAMATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 SSAVLKAAAH 10
S VLKA AH
Sbjct: 261 SLCVLKAGAH 270




6|Sequence|26|35|KAAAHHYGAQ

>sp|SUMT_METIV|UROPORPHYRINOGEN-III C-methyltransferase|Methanobacterium ivanovii

Query: 1 KAAAHHYGAQ 10
K A HHY +Q
Sbjct: 54 KQAGHHYKSQ 63


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 KAAAHHYG 8
+A A HYG
Sbjct: 334 RAVAEHYG 341


>sp|ENDA_METJA|TRNA-SPLICING endonuclease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KAAAHHYG 8
K +A HYG
Sbjct: 29 KLSARHYG 36


>sp|HDRB1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina acetivorans

Query: 1 KAAAHH 6
KAA+HH
Sbjct: 164 KAASHH 169


>sp|GUAAA_THEVO|GMP synthase [glutamine-hydrolyzing] subunit A|Thermoplasma volcanium

Query: 4 AHHYGAQ 10
A HYGAQ
Sbjct: 88 ALHYGAQ 94


>sp|Y947_ARCFU|PUTATIVE RNase AF_0947|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AAAHHY 7
A AHHY
Sbjct: 93 AIAHHY 98




7|Sequence|31|40|HYGAQCDKPN

>sp|NDK_METS3|NUCLEOSIDE diphosphate kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 HYGAQCDKP 9
HYG DKP
Sbjct: 49 HYGEHADKP 57


>sp|NDK_METST|NUCLEOSIDE diphosphate kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 HYGAQCDKP 9
HYG DKP
Sbjct: 49 HYGEHSDKP 57


>sp|NDK_HALWD|NUCLEOSIDE diphosphate kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HYGAQCDKP 9
HYG DKP
Sbjct: 55 HYGEHKDKP 63


>sp|NDK_HALMA|NUCLEOSIDE diphosphate kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HYGAQCDKP 9
HYG DKP
Sbjct: 51 HYGEHEDKP 59


>sp|NDK_NATPD|NUCLEOSIDE diphosphate kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HYGAQCDKP 9
HY DKP
Sbjct: 51 HYAEHVDKP 59


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 YGAQCDK 8
YG QC+K
Sbjct: 152 YGDQCEK 158


>sp|HIS6_META3|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus aeolicus (strain

Query: 2 YGAQC 6
YGAQC
Sbjct: 120 YGAQC 124


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YGAQCDKPN 10
YGA+C+ N
Sbjct: 189 YGAKCEDLN 197


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 YGAQCD 7
YG QCD
Sbjct: 152 YGDQCD 157


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 2 YGAQCD 7
YG++CD
Sbjct: 257 YGSKCD 262


>sp|PYRF_HALLT|OROTIDINE 5'-phosphate decarboxylase|Halorubrum lacusprofundi (strain ATCC

Query: 1 HYGAQCDKPN 10
H A C KPN
Sbjct: 52 HEHAACYKPN 61


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 YGAQCDKPN 10
YGA+ +PN
Sbjct: 283 YGAELVRPN 291


>sp|DTDA_IGNH4|D-AMINOACYL-TRNA deacylase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 HYGAQCDKP 9
H+G DKP
Sbjct: 115 HHGPTSDKP 123


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 HYGAQCDKP 9
HYG D P
Sbjct: 339 HYGFSLDTP 347


>sp|PYRF_HALMA|OROTIDINE 5'-phosphate decarboxylase|Haloarcula marismortui (strain ATCC

Query: 1 HYGAQCDKPN 10
H A C KPN
Sbjct: 52 HEHAACYKPN 61


>sp|PYRF_NATPD|OROTIDINE 5'-phosphate decarboxylase|Natronomonas pharaonis (strain ATCC

Query: 1 HYGAQCDKPN 10
H A C KPN
Sbjct: 51 HEHAACYKPN 60




8|Sequence|36|45|CDKPNKEFML

>sp|FAEHP_METMA|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DKPNKEFML 10
D PN EF+L
Sbjct: 180 DNPNLEFVL 188


>sp|FAEHP_METAC|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DKPNKEFML 10
D PN EF+L
Sbjct: 180 DNPNLEFVL 188


>sp|G1PDH_META3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus aeolicus (strain ATCC

Query: 2 DKPNKEFM 9
++PNKEF+
Sbjct: 59 NEPNKEFI 66


>sp|Y1001_ARCFU|UNCHARACTERIZED protein AF_1001|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DKPNKEFML 10
D PNKE +L
Sbjct: 80 DMPNKETLL 88


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DKPNKEFM 9
D P KEF+
Sbjct: 1312 DSPEKEFL 1319


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 CDKPNKEFM 9
C+KPN+ +
Sbjct: 589 CEKPNESML 597


>sp|Y906_METJA|UNCHARACTERIZED protein MJ0906|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PNKEFML 10
PNK+F+L
Sbjct: 97 PNKQFIL 103


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 1 CDKPNKEFML 10
CDK N E L
Sbjct: 348 CDKDNSEMEL 357




9|Sequence|41|50|KEFMLCRWEE

>sp|Y2337_ARCFU|UNCHARACTERIZED protein AF_2337|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KEFMLCRWEE 10
KEFML WEE
Sbjct: 272 KEFMLREWEE 281


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KEFMLCRWEE 10
KEF++ R+EE
Sbjct: 518 KEFLVERFEE 527


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 KEFMLCRWEE 10
KEF++ R+EE
Sbjct: 518 KEFLVERFEE 527


>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EFMLCRW 8
+ M CRW
Sbjct: 121 DMMQCRW 127


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EFMLCRWE 9
+F+L +WE
Sbjct: 331 DFLLSKWE 338


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 2 EFMLCRWE 9
+F+L +WE
Sbjct: 330 DFLLSKWE 337


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EFMLCRWE 9
+F+L +WE
Sbjct: 326 DFLLSKWE 333


>sp|GLMM_METST|PROBABLE phosphoglucosamine mutase|Methanosphaera stadtmanae (strain ATCC

Query: 1 KEFMLCRWEE 10
K+F + +W E
Sbjct: 135 KDFNIVKWNE 144


>sp|THTR_METTH|PUTATIVE thiosulfate sulfurtransferase|Methanothermobacter

Query: 2 EFMLCRW 8
EF+L RW
Sbjct: 248 EFLLFRW 254




10|Sequence|46|55|CRWEEKDPRR

>sp|LYSX_SULAC|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RWEEKD 7
RWEEKD
Sbjct: 2 RWEEKD 7


>sp|RRP41_HYPBU|EXOSOME complex component Rrp41|Hyperthermus butylicus (strain DSM 5456

Query: 2 RWEEKDPRR 10
RWEE+D ++
Sbjct: 13 RWEERDGQK 21


>sp|RL6_METAR|LARGE ribosomal subunit protein uL6|Methanocella arvoryzae (strain DSM

Query: 1 CRWEEKDPR 9
CR ++DPR
Sbjct: 157 CRIRKRDPR 165


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 RWEEKDPR 9
RW +DPR
Sbjct: 192 RWPVRDPR 199


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 2 RWEEKDPRR 10
RW + PRR
Sbjct: 344 RWTSQGPRR 352


>sp|LYSX_SACS2|ALPHA-AMINOADIPATE--LYSW ligase LysX|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RWEEKD 7
RWEEK+
Sbjct: 3 RWEEKN 8


>sp|PIP_SACS2|PROLINE iminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 WEEKD 7
WEEKD
Sbjct: 286 WEEKD 290


>sp|LYSX_SULTO|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RWEEKD 7
RWEEK+
Sbjct: 11 RWEEKN 16


>sp|GGR_HALVD|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Haloferax volcanii (strain ATCC 29605

Query: 3 WEEKDPR 9
W E DPR
Sbjct: 246 WTESDPR 252


>sp|RTCA_THEKO|RNA 3'-terminal phosphate cyclase|Thermococcus kodakarensis (strain

Query: 3 WEEKDP 8
WEEK P
Sbjct: 171 WEEKKP 176


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 CRWEEKDPR 9
CR EK PR
Sbjct: 63 CRITEKTPR 71


>sp|Y872_METJA|UNCHARACTERIZED lipoprotein MJ0872|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WEEKDP 8
WE +DP
Sbjct: 357 WEARDP 362


>sp|PROF3_LOKSG|LOKI profilin-3|Lokiarchaeum sp. (strain GC14_75)

Query: 3 WEEKDP 8
W+EK+P
Sbjct: 52 WKEKEP 57


>sp|COFE_HALSA|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC

Query: 4 EEKDPR 9
E+KDPR
Sbjct: 73 EQKDPR 78


>sp|COFE_HALS3|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC

Query: 4 EEKDPR 9
E+KDPR
Sbjct: 73 EQKDPR 78


>sp|COFE_HALMA|COENZYME F420:L-glutamate ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 EEKDPR 9
EEKDPR
Sbjct: 73 EEKDPR 78


>sp|MTSA_METBA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina barkeri

Query: 2 RWEEKDPRR 10
RW + DP +
Sbjct: 162 RWTKTDPEK 170


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CRWEEK 6
C WEE+
Sbjct: 660 CMWEEE 665


>sp|MTSA_METMA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RWEEKDPRR 10
RW + DP +
Sbjct: 162 RWTKTDPEK 170


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 2 RWEEKDP 8
+WE+ DP
Sbjct: 49 KWEKVDP 55


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 RWEEKDPR 9
R+E+ DPR
Sbjct: 148 RFEDTDPR 155


>sp|RFCL_THEVO|REPLICATION factor C large subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 3 WEEKDPRR 10
WEE P++
Sbjct: 32 WEEGSPKK 39


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 CRWEEKDPR 9
R+E+ DPR
Sbjct: 137 LRFEDTDPR 145


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CRWEEKDP 8
CR+++ DP
Sbjct: 144 CRFDDTDP 151


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 CRWEEKDPR 9
R+E+ DPR
Sbjct: 127 LRFEDTDPR 135


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 CRWEEKDPR 9
R+E+ DPR
Sbjct: 123 LRFEDTDPR 131


>sp|PGK2_METM7|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C7 /

Query: 2 RWEEKDPR 9
+WEE+D +
Sbjct: 161 QWEEQDTK 168


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 CRWEEKDPR 9
R+E+ DPR
Sbjct: 137 LRFEDTDPR 145


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 CRWEEKDPR 9
R+E+ DPR
Sbjct: 139 LRFEDTDPR 147


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 CRWEEKDPR 9
R+E+ DPR
Sbjct: 139 LRFEDTDPR 147


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 CRWEEKDPR 9
R+E+ DPR
Sbjct: 137 LRFEDTDPR 145


>sp|COFE_HALLT|COENZYME F420:L-glutamate ligase|Halorubrum lacusprofundi (strain ATCC

Query: 4 EEKDPR 9
EEKDPR
Sbjct: 73 EEKDPR 78


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 CRWEEKDPR 9
R+E+ DPR
Sbjct: 137 LRFEDTDPR 145


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CRWEEKDPR 9
R+E+ DPR
Sbjct: 137 LRFEDTDPR 145


>sp|SYT_PYRAE|THREONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 WEEKDP 8
WE +DP
Sbjct: 13 WEPRDP 18


>sp|RNP3_THEKO|RIBONUCLEASE P protein component 3|Thermococcus kodakarensis (strain ATCC

Query: 1 CRWEEKDPR 9
RWE + PR
Sbjct: 181 SRWEVRGPR 189




11|Sequence|51|60|KDPRRCLEEG

>sp|LYSZ_IGNH4|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Ignicoccus hospitalis

Query: 2 DPRRCLEE 9
DP +CLEE
Sbjct: 249 DPLKCLEE 256


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DPRRCLEE 9
DPR+ LEE
Sbjct: 160 DPRQILEE 167


>sp|GLK_PYRCJ|GLUCOKINASE calidifontis (strain DSM 21063

Query: 1 KDPRRC 6
K PRRC
Sbjct: 153 KSPRRC 158


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DPRRCLE 8
DPR CL+
Sbjct: 112 DPRGCLK 118


>sp|HIS8_METM5|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C5 /

Query: 5 RCLEEG 10
RCL+EG
Sbjct: 279 RCLKEG 284


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KDPRRCLEEG 10
K+P R L+EG
Sbjct: 456 KEPWRLLKEG 465


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 2 DPRRCLEE 9
DP++CL E
Sbjct: 203 DPKKCLLE 210


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 2 DPRRCLE 8
DPR CL+
Sbjct: 113 DPRGCLK 119


>sp|VHUG_METJA|F420-NON-REDUCING hydrogenase vhu subunit G|Methanocaldococcus jannaschii (strain

Query: 2 DPRRCLEE 9
DP RCL E
Sbjct: 203 DPERCLFE 210


>sp|HEM3_METKA|PROBABLE porphobilinogen deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 KDPRRCL 7
+DPR CL
Sbjct: 102 RDPRECL 108


>sp|RL35A_METKA|LARGE ribosomal subunit protein eL33|Methanopyrus kandleri (strain AV19

Query: 1 KDPRRCLEE 9
+DPR+C+ E
Sbjct: 19 QDPRQCIIE 27


>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RRCLEEG 10
R+CLE G
Sbjct: 336 RKCLENG 342


>sp|AROD_AERPE|3-DEHYDROQUINATE dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PRRCLEE 9
PRR LEE
Sbjct: 124 PRRALEE 130


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 3 PRRCLEEG 10
PR+ +EEG
Sbjct: 529 PRKFIEEG 536


>sp|TPIS_METBU|TRIOSEPHOSPHATE isomerase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KDPRRCLEE 9
KDP+ LE+
Sbjct: 208 KDPKAALED 216


>sp|TYSY_METKA|PUTATIVE thymidylate synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 DPRRCLEE 9
DPRR L+E
Sbjct: 125 DPRRDLDE 132




12|Sequence|56|65|CLEEGKLVNK

>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CLEEGKLVN 9
CLE G LVN
Sbjct: 338 CLENGLLVN 346


>sp|DPHB_PYRIL|DIPHTHINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 CLEEGK 6
CL+EGK
Sbjct: 69 CLQEGK 74


>sp|DCDB_METS3|DCTP deaminase, dUMP-forming|Methanobrevibacter smithii (strain ATCC

Query: 2 LEEGKLV 8
LEEGK+V
Sbjct: 13 LEEGKIV 19


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 2 LEEGKLVN 9
L EG+LVN
Sbjct: 345 LAEGRLVN 352


>sp|SAHH_HALWC|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16854

Query: 2 LEEGKLVN 9
L EG+LVN
Sbjct: 345 LAEGRLVN 352


>sp|SAHH_HALSA|ADENOSYLHOMOCYSTEINASE salinarum (strain ATCC 700922

Query: 2 LEEGKLVN 9
L EG+LVN
Sbjct: 340 LAEGRLVN 347


>sp|SAHH_HALS3|ADENOSYLHOMOCYSTEINASE salinarum (strain ATCC 29341

Query: 2 LEEGKLVN 9
L EG+LVN
Sbjct: 340 LAEGRLVN 347


>sp|SAHH_THEKO|ADENOSYLHOMOCYSTEINASE kodakarensis (strain ATCC BAA-918

Query: 2 LEEGKLVN 9
L EG+LVN
Sbjct: 336 LAEGRLVN 343


>sp|THS_METJA|THERMOSOME subunit|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CLEEGKLV 8
LEEGK+V
Sbjct: 398 ALEEGKIV 405


>sp|SAHH_ARCFU|ADENOSYLHOMOCYSTEINASE fulgidus (strain ATCC 49558

Query: 2 LEEGKLVN 9
L EG+LVN
Sbjct: 320 LAEGRLVN 327


>sp|PURA_THESM|ADENYLOSUCCINATE synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 2 LEEGKLV 8
L+EGKLV
Sbjct: 167 LDEGKLV 173


>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 2 LEEGKLV 8
L+EGKLV
Sbjct: 167 LDEGKLV 173


>sp|PURA_THEGJ|ADENYLOSUCCINATE synthetase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LEEGKLV 8
L+EGKLV
Sbjct: 167 LDEGKLV 173


>sp|DPHB_PYRAE|DIPHTHINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CLEEGK 6
CL+EGK
Sbjct: 69 CLKEGK 74


>sp|Y978_PYRFU|UPF0252 protein PF0978|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CLEEGKLVNK 10
CLE+ K +NK
Sbjct: 31 CLEQEKDLNK 40


>sp|SIHH_METTH|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LEEGKLVN 9
L EG+LVN
Sbjct: 332 LAEGRLVN 339


>sp|PPAC_METJA|MANGANESE-DEPENDENT inorganic pyrophosphatase|Methanocaldococcus jannaschii (strain

Query: 2 LEEGKLV 8
LEEGKL+
Sbjct: 77 LEEGKLI 83


>sp|CHEB_THEKO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Thermococcus

Query: 3 EEGKLVNK 10
E+G++VNK
Sbjct: 224 EDGEVVNK 231


>sp|SAHH_SULTO|ADENOSYLHOMOCYSTEINASE tokodaii (strain DSM 16993

Query: 2 LEEGKLVN 9
L EG+LVN
Sbjct: 330 LAEGRLVN 337


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CLEEGKLV 8
C+++GK+V
Sbjct: 25 CVKDGKIV 32


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 CLEEGKL 7
C EEGKL
Sbjct: 240 CREEGKL 246




13|Sequence|61|70|KLVNKCALDF

>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 1 KLVNKCALDF 10
KLV+ CA +F
Sbjct: 534 KLVDTCAAEF 543


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 KLVNKCALDF 10
K+V+ CA +F
Sbjct: 517 KMVDTCAAEF 526


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 1 KLVNKCALDF 10
K+V+ CA +F
Sbjct: 513 KMVDTCAAEF 522


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 KLVNKCALDF 10
K+V+ CA +F
Sbjct: 512 KMVDTCAAEF 521


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 1 KLVNKCALDF 10
K+V+ CA +F
Sbjct: 504 KMVDTCAAEF 513


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 KLVNKCALDF 10
K+V+ CA +F
Sbjct: 504 KMVDTCAAEF 513


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 KLVNKCALDF 10
K+V+ CA +F
Sbjct: 514 KMVDTCAAEF 523


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 KLVNKCALDF 10
K+V+ CA +F
Sbjct: 505 KMVDTCAAEF 514


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 KLVNKCALDF 10
K+V+ CA +F
Sbjct: 514 KMVDTCAAEF 523


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 1 KLVNKCALDF 10
K+V+ CA +F
Sbjct: 504 KMVDTCAAEF 513


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 KLVNKCALDF 10
K+V+ CA +F
Sbjct: 514 KMVDTCAAEF 523


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 KLVNKCALDF 10
K+V+ CA +F
Sbjct: 529 KMVDTCAAEF 538


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 KLVNKCALDF 10
K+V+ CA +F
Sbjct: 48 KMVDTCAAEF 57


>sp|Y819_METVS|UPF0212 protein Mevan_0819|Methanococcus vannielii (strain ATCC 35089

Query: 1 KLVNKCALDF 10
KL+NK +LD+
Sbjct: 33 KLLNKGSLDY 42


>sp|Y753_METM7|UPF0212 protein MmarC7_0753|Methanococcus maripaludis (strain C7 /

Query: 1 KLVNKCALDF 10
KL+NK +LD+
Sbjct: 33 KLLNKGSLDY 42


>sp|Y1509_METMP|UPF0212 protein MMP1509|Methanococcus maripaludis (strain DSM 14266

Query: 1 KLVNKCALDF 10
KL+NK +LD+
Sbjct: 33 KLLNKGSLDY 42


>sp|Y1509_METMI|UPF0212 protein in gatA 3'region|Methanococcus maripaludis (Methanococcus

Query: 1 KLVNKCALDF 10
KL+NK +LD+
Sbjct: 33 KLLNKGSLDY 42


>sp|Y1165_METM6|UPF0212 protein MmarC6_1165|Methanococcus maripaludis (strain C6 /

Query: 1 KLVNKCALDF 10
KL+NK +LD+
Sbjct: 33 KLLNKGSLDY 42


>sp|Y068_METM5|UPF0212 protein MmarC5_0068|Methanococcus maripaludis (strain C5 /

Query: 1 KLVNKCALDF 10
KL+NK +LD+
Sbjct: 33 KLLNKGSLDY 42


>sp|MTD_METMP|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 KLVNKCAL 8
K++NKC L
Sbjct: 265 KILNKCKL 272


>sp|MTD_METM7|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 KLVNKCAL 8
K++NKC L
Sbjct: 265 KILNKCKL 272


>sp|Y956_METJA|UNCHARACTERIZED protein MJ0956|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLVNKC 6
KLVNKC
Sbjct: 248 KLVNKC 253


>sp|MTD_METVS|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 KLVNKCAL 8
K++NKC L
Sbjct: 264 KILNKCKL 271


>sp|KPRS_METS3|RIBOSE-PHOSPHATE pyrophosphokinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 KCALDF 10
KC LDF
Sbjct: 127 KCVLDF 132




14|Sequence|66|75|CALDFFRQIK

>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CALDFFRQIK 10
C LD + QI+
Sbjct: 11 CPLDVYEQIR 20


>sp|Y863_ARCFU|UNCHARACTERIZED protein AF_0863|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ALDFFRQI 9
LDFFR I
Sbjct: 156 GLDFFRNI 163


>sp|KPRS_METS3|RIBOSE-PHOSPHATE pyrophosphokinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 CALDFF 6
C LDFF
Sbjct: 128 CVLDFF 133




15|Sequence|71|80|FRQIKRHCAE

>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 1 FRQIKRHCAE 10
FR+ RHC E
Sbjct: 218 FRKPARHCGE 227


>sp|PHI_METJA|3-HEXULOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IKRHC 8
IKRHC
Sbjct: 173 IKRHC 177


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 3 QIKRHCAE 10
+IK++CA+
Sbjct: 257 EIKKYCAD 264




16|Sequence|76|85|RHCAEPFTEY

>sp|RS3_METVS|SMALL ribosomal subunit protein uS3|Methanococcus vannielii (strain ATCC

Query: 1 RHCAEPFTE 9
+HC EP E
Sbjct: 151 KHCGEPAEE 159


>sp|RS3_META3|SMALL ribosomal subunit protein uS3|Methanococcus aeolicus (strain ATCC

Query: 1 RHCAEPFTE 9
+HC EP E
Sbjct: 151 KHCGEPSEE 159


>sp|RS3_METJA|SMALL ribosomal subunit protein uS3|Methanocaldococcus jannaschii (strain

Query: 1 RHCAEPFTE 9
+HC EP E
Sbjct: 151 KHCGEPAEE 159


>sp|RS3_METMP|SMALL ribosomal subunit protein uS3|Methanococcus maripaludis (strain DSM

Query: 1 RHCAEP 6
+HC EP
Sbjct: 151 KHCGEP 156


>sp|RS3_METMJ|SMALL ribosomal subunit protein uS3|Methanoculleus marisnigri (strain

Query: 1 RHCAEP 6
+HC EP
Sbjct: 152 KHCGEP 157


>sp|RS3_METM7|SMALL ribosomal subunit protein uS3|Methanococcus maripaludis (strain C7

Query: 1 RHCAEP 6
+HC EP
Sbjct: 151 KHCGEP 156


>sp|RS3_METM6|SMALL ribosomal subunit protein uS3|Methanococcus maripaludis (strain C6

Query: 1 RHCAEP 6
+HC EP
Sbjct: 151 KHCGEP 156


>sp|RS3_METM5|SMALL ribosomal subunit protein uS3|Methanococcus maripaludis (strain C5

Query: 1 RHCAEP 6
+HC EP
Sbjct: 151 KHCGEP 156


>sp|RS3_METKA|SMALL ribosomal subunit protein uS3|Methanopyrus kandleri (strain AV19 /

Query: 1 RHCAEPFTEY 10
++C EP EY
Sbjct: 160 KYCGEPGDEY 169


>sp|RS3_METB6|SMALL ribosomal subunit protein uS3|Methanoregula boonei (strain DSM

Query: 1 RHCAEP 6
+HC EP
Sbjct: 152 KHCGEP 157


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 AEPFTEY 10
AEP TEY
Sbjct: 81 AEPTTEY 87


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 AEPFTEY 10
AEP TEY
Sbjct: 81 AEPTTEY 87


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 AEPFTEY 10
AEP TEY
Sbjct: 81 AEPTTEY 87


>sp|SPSS1_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HCAEPF 7
HC +PF
Sbjct: 48 HCTKPF 53


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HCAEPFTEY 10
H +P+T+Y
Sbjct: 399 HTRKPYTKY 407


>sp|DTDA_PYRNV|D-AMINOACYL-TRNA deacylase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RHCAEPF 7
RH EPF
Sbjct: 108 RHAEEPF 114




17|Sequence|81|90|PFTEYWTCID

>sp|PYRC_METTH|DIHYDROOROTASE thermautotrophicus (strain ATCC 29096

Query: 1 PFTEYWTC 8
PF EY TC
Sbjct: 235 PFREYVTC 242


>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PFTEYWT 7
PF+E WT
Sbjct: 326 PFSEIWT 332


>sp|RL3_NATPD|LARGE ribosomal subunit protein uL3|Natronomonas pharaonis (strain ATCC

Query: 1 PFTEYWT 7
P TE WT
Sbjct: 97 PLTEVWT 103


>sp|RL3_HALMA|LARGE ribosomal subunit protein uL3|Haloarcula marismortui (strain ATCC

Query: 1 PFTEYWT 7
P TE WT
Sbjct: 97 PLTEVWT 103


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 TEYWTCID 10
+EY+ C+D
Sbjct: 570 SEYYACMD 577


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 YWTCI 9
YW CI
Sbjct: 317 YWNCI 321


>sp|GLCD1_PICTO|GLUCOSE 1-dehydrogenase 1|Picrophilus torridus (strain ATCC 700027

Query: 5 YWTCID 10
+W CID
Sbjct: 164 HWPCID 169


>sp|MFNA_METM7|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 PFTEYWT 7
P TEY+T
Sbjct: 135 PLTEYFT 141


>sp|MFNA_METM5|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 PFTEYWT 7
P TEY+T
Sbjct: 135 PLTEYFT 141


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 2 FTEYWTCID 10
F + WTC D
Sbjct: 193 FNKAWTCKD 201


>sp|RPO3_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum arsenaticum (strain DSM

Query: 2 FTEYWTCID 10
F + WTC D
Sbjct: 193 FNKAWTCKD 201


>sp|RPO3_PYRIL|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum islandicum (strain DSM 4184

Query: 2 FTEYWTCID 10
F + WTC D
Sbjct: 193 FNKAWTCRD 201


>sp|Y2134_ARCFU|UNCHARACTERIZED protein AF_2134|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FTEYWTCID 10
++W CID
Sbjct: 52 LADWWLCID 60


>sp|Y1033_PYRHO|UPF0310 protein PH1033|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 YWTCI 9
YW CI
Sbjct: 3 YWICI 7


>sp|Y474_KORCO|UPF0310 protein Kcr_0474|Korarchaeum cryptofilum (strain OPF8)

Query: 5 YWTCI 9
YW CI
Sbjct: 3 YWLCI 7


>sp|Y2356_ARCFU|UPF0310 protein AF_2356|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 YWTCI 9
YW CI
Sbjct: 3 YWLCI 7


>sp|Y875_PYRAB|UPF0310 protein PYRAB08750|Pyrococcus abyssi (strain GE5 /

Query: 5 YWTCI 9
YW CI
Sbjct: 3 YWLCI 7




18|Sequence|86|95|WTCIDYTGQQ

>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain ATCC

Query: 5 DYTGQQ 10
DYTGQQ
Sbjct: 196 DYTGQQ 201


>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 1 WTCIDYTGQQ 10
W C ++ GQ+
Sbjct: 114 WGCENFLGQE 123


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 1 WTCIDYTGQQ 10
WT ++Y G +
Sbjct: 283 WTLLNYHGME 292


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 CIDYTG 8
C+DY G
Sbjct: 2041 CVDYDG 2046


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TCIDYTG 8
TC+ YTG
Sbjct: 673 TCMYYTG 679


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TCIDYTG 8
TC+ YTG
Sbjct: 555 TCMYYTG 561


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 2 TCIDYTG 8
TC+ YTG
Sbjct: 520 TCMYYTG 526


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WTCIDY 6
W C++Y
Sbjct: 292 WLCLEY 297




19|Sequence|91|100|YTGQQLFRHC

>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 2 TGQQLFRHC 10
TG++LF HC
Sbjct: 23 TGRKLFCHC 31


>sp|COFC_METPE|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 YTGQQLFRHC 10
Y GQ +HC
Sbjct: 136 YYGQSFMKHC 145


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 YTGQQLFRH 9
Y G++ +RH
Sbjct: 784 YLGERYYRH 792


>sp|Y1644_METJA|UNCHARACTERIZED protein MJ1644|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YTGQQLFRHC 10
YTG FR C
Sbjct: 126 YTGVDSFRIC 135


>sp|MSRA_METM7|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 1 YTGQQLFRH 9
++ ++LFRH
Sbjct: 15 WSAEELFRH 23




20|Sequence|96|105|LFRHCRKQQA

>sp|Y1673_METJA|UNCHARACTERIZED protein MJ1673|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FRHCR 6
F+HCR
Sbjct: 118 FKHCR 122




21|Sequence|101|110|RKQQAKFDEC

>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 KQQAKFDE 9
+QQAK DE
Sbjct: 61 EQQAKLDE 68


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 KQQAKFDE 9
+QQAK DE
Sbjct: 61 EQQAKLDE 68


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 KQQAKFDE 9
+QQAK DE
Sbjct: 61 EQQAKLDE 68


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KQQAKFDE 9
+QQAK DE
Sbjct: 61 EQQAKLDE 68


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 QQAKFDEC 10
+QA+ DEC
Sbjct: 155 EQARGDEC 162




22|Sequence|106|115|KFDECVLDKL

>sp|RBL_METMA|RIBULOSE bisphosphate carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DECVLDKL 10
D+CVLDK+
Sbjct: 323 DQCVLDKV 330


>sp|RBL_METBF|RIBULOSE bisphosphate carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DECVLDKL 10
DECVLD +
Sbjct: 323 DECVLDNV 330


>sp|RBL_METAC|RIBULOSE bisphosphate carboxylase|Methanosarcina acetivorans (strain ATCC

Query: 3 DECVLDKL 10
DECVLD +
Sbjct: 323 DECVLDTV 330


>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KFDECVLDKL 10
+FDEC+ KL
Sbjct: 240 EFDECLFPKL 249


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 FDECVLD 8
FD C++D
Sbjct: 292 FDSCIID 298


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KFDECVLDK 9
KF C++DK
Sbjct: 342 KFITCIVDK 350


>sp|AROC_THEKO|CHORISMATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KFDECVLDK 9
+FD C++ K
Sbjct: 319 RFDSCIVPK 327


>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KFDECVLDK 9
+FD C++ K
Sbjct: 320 RFDSCIVPK 328




23|Sequence|111|120|VLDKLGWVRP

>sp|RL30_KORCO|LARGE ribosomal subunit protein uL30|Korarchaeum cryptofilum (strain

Query: 2 LDKLGWVRP 10
L KLGW++P
Sbjct: 114 LHKLGWIKP 122


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VLDKLGWV 8
+LD+LGW+
Sbjct: 311 LLDRLGWI 318


>sp|SYFA_SACS2|PHENYLALANINE--TRNA ligase alpha subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LDKLGWV 8
L+KLGWV
Sbjct: 401 LEKLGWV 407


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VLDKLGW 7
VLDK GW
Sbjct: 77 VLDKAGW 83


>sp|DHQS_METST|3-DEHYDROQUINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 KLGWVRP 10
K W+RP
Sbjct: 2 KFAWIRP 8


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VLDKLGWVR 9
V +KLGWV+
Sbjct: 201 VAEKLGWVK 209


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LDKLGWV 8
+D+LGW+
Sbjct: 468 MDRLGWL 474


>sp|HDRD_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina barkeri (strain

Query: 3 DKLGWVRP 10
D+L WV P
Sbjct: 148 DRLAWVPP 155


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VLDKLGW 7
VLDK GW
Sbjct: 78 VLDKAGW 84


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLDKLGW 7
VLDK GW
Sbjct: 77 VLDKAGW 83


>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DKLGWVR 9
+KLGWV+
Sbjct: 206 EKLGWVK 212


>sp|KPTA_METMA|PROBABLE RNA 2'-phosphotransferase|Methanosarcina mazei (strain ATCC

Query: 2 LDKLGWV 8
+DK GW+
Sbjct: 54 MDKYGWI 60


>sp|PYRE_AERPE|OROTATE phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VLDKLGW 7
+L+KLGW
Sbjct: 177 ILEKLGW 183


>sp|MALG_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 2 LDKLGWV 8
++KLGWV
Sbjct: 129 IEKLGWV 135


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 1 VLDKLGWVRP 10
+LDK+G + P
Sbjct: 222 LLDKIGMIAP 231


>sp|TRM1_META3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus aeolicus

Query: 2 LDKLGWVR 9
+DKLG+V+
Sbjct: 239 VDKLGYVK 246


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLDKLGWV 8
+L+KL W+
Sbjct: 483 ILEKLSWI 490


>sp|RL18_HALMT|LARGE ribosomal subunit protein uL18|Haloferax mediterranei (strain

Query: 2 LDKLGWVRP 10
LD+ GW P
Sbjct: 67 LDEYGWEAP 75


>sp|RL18_HALVD|LARGE ribosomal subunit protein uL18|Haloferax volcanii (strain ATCC

Query: 2 LDKLGWVRP 10
LD+ GW P
Sbjct: 67 LDEYGWEAP 75


>sp|GATD_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermococcus kodakarensis (strain ATCC

Query: 4 KLGWV 8
KLGWV
Sbjct: 403 KLGWV 407


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 6 GWVRP 10
GW+RP
Sbjct: 752 GWMRP 756


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 VLDKLGWVRP 10
V+D+ G V+P
Sbjct: 48 VIDEFGGVKP 57


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LDKLGWV 8
L+KL WV
Sbjct: 24 LEKLAWV 30


>sp|RPO10_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum calidifontis (strain DSM

Query: 1 VLDKLGWVR 9
VLD+LG VR
Sbjct: 34 VLDELGVVR 42


>sp|RL24E_AERPE|LARGE ribosomal subunit protein eL24|Aeropyrum pernix (strain ATCC

Query: 3 DKLGWVR 9
DKL WVR
Sbjct: 49 DKLEWVR 55


>sp|Y487_THEAC|PROTEIN Ta0487|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LDKLGW 7
LD++GW
Sbjct: 47 LDEIGW 52


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VLDKLGWVRP 10
+LDK+G + P
Sbjct: 547 ILDKVGPIEP 556


>sp|METE_THEKO|METHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VLDKLGWVR 9
VLD+ WV+
Sbjct: 111 VLDEFRWVK 119


>sp|HDRD_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina acetivorans

Query: 3 DKLGWVRP 10
D+L WV P
Sbjct: 148 DRLAWVPP 155


>sp|HDRD_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina thermophila

Query: 3 DKLGWVRP 10
D+L WV P
Sbjct: 148 DRLAWVPP 155


>sp|SYH_METKA|HISTIDINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 LDKLGWV 8
L KLGWV
Sbjct: 353 LRKLGWV 359


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 KLGWV 8
KLGWV
Sbjct: 1040 KLGWV 1044




24|Sequence|116|125|GWVRPDLGEL

>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 VRPDLGEL 10
VRPD GEL
Sbjct: 258 VRPDSGEL 265


>sp|Y1599_METJA|UNCHARACTERIZED protein MJ1599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WVRPDLG 8
W +PDLG
Sbjct: 204 WKKPDLG 210


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 2 WVRPDLGE 9
WV PDL +
Sbjct: 315 WVSPDLAK 322


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GWVRPDLGE 9
G+V+PDL E
Sbjct: 413 GFVQPDLEE 421


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 2 WVRPDLG 8
WV PDL
Sbjct: 314 WVSPDLA 320


>sp|METE_SULAC|METHIONINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WVRPDLG 8
WV PD G
Sbjct: 290 WVNPDCG 296


>sp|METE_SULTO|METHIONINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WVRPDLG 8
WV PD G
Sbjct: 289 WVNPDCG 295


>sp|DPCKG_CALMQ|GTP-DEPENDENT dephospho-CoA kinase|Caldivirga maquilingensis (strain ATCC

Query: 2 WVRPDL 7
W RPDL
Sbjct: 66 WRRPDL 71


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GWVRPDLG 8
+VRPDLG
Sbjct: 301 SFVRPDLG 308


>sp|WTPC_ARCFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Archaeoglobus fulgidus (strain

Query: 1 GWVRPDLGEL 10
G V+PD GE+
Sbjct: 46 GIVKPDRGEV 55


>sp|METE_SACI6|METHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 WVRPDLG 8
W+ PD G
Sbjct: 291 WINPDCG 297


>sp|METE_SACI4|METHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 WVRPDLG 8
W+ PD G
Sbjct: 291 WINPDCG 297


>sp|METE_SACI3|METHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 WVRPDLG 8
W+ PD G
Sbjct: 291 WINPDCG 297


>sp|METE_SACI2|METHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 WVRPDLG 8
W+ PD G
Sbjct: 291 WINPDCG 297


>sp|METE_SACS2|METHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WVRPDLG 8
W+ PD G
Sbjct: 291 WINPDCG 297


>sp|METE_SACI7|METHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 WVRPDLG 8
W+ PD G
Sbjct: 291 WINPDCG 297


>sp|METE_SACI1|METHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 WVRPDLG 8
W+ PD G
Sbjct: 291 WINPDCG 297


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WVRPDLG 8
W+R DLG
Sbjct: 259 WIRIDLG 265


>sp|DTDA_METMA|D-AMINOACYL-TRNA deacylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WVRPDLGEL 10
W PD GE+
Sbjct: 181 WEDPDAGEV 189


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 WVRPDLGEL 10
W PDLG++
Sbjct: 360 WDDPDLGQI 368


>sp|Y828_METBU|UPF0210 protein Mbur_0828|Methanococcoides burtonii (strain DSM 6242

Query: 5 PDLGEL 10
PDLGE+
Sbjct: 235 PDLGEI 240


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 WVRPDLGEL 10
W+R LGEL
Sbjct: 199 WLREYLGEL 207


>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WVRPDLG 8
WVR DLG
Sbjct: 261 WVRIDLG 267


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 WVRPDL 7
WVRP+L
Sbjct: 569 WVRPEL 574


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 WVRPDL 7
WVRP+L
Sbjct: 569 WVRPEL 574


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GWVRPDL 7
GW +P+L
Sbjct: 452 GWFQPEL 458


>sp|Y719_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GWVRPDLGEL 10
G ++PD GE+
Sbjct: 395 GVIKPDEGEV 404


>sp|XYLG_SULAC|XYLOSE/ARABINOSE import ATP-binding protein XylG|Sulfolobus acidocaldarius (strain

Query: 1 GWVRPDLGEL 10
G+ +PD G+L
Sbjct: 52 GYHKPDRGDL 61


>sp|Y1902_METTH|UPF0173 metal-dependent hydrolase MTH_1902|Methanothermobacter

Query: 1 GWVRPD 6
GW++P+
Sbjct: 181 GWIKPE 186


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 VRPDLGEL 10
V+PD+G+L
Sbjct: 363 VKPDMGKL 370


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 WVRPDL 7
W+ PDL
Sbjct: 234 WINPDL 239


>sp|ARE_SACSO|ARYLESTERASE solfataricus (Sulfolobus solfataricus)

Query: 2 WVRPDLGEL 10
W R + GEL
Sbjct: 135 WARDNAGEL 143


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 WVRPD 6
WV+PD
Sbjct: 250 WVKPD 254


>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WVRPDLG 8
W+R DLG
Sbjct: 259 WIRIDLG 265


>sp|RIFK_THEPD|RIBOFLAVIN kinase|Thermofilum pendens (strain DSM 2475

Query: 1 GWVRPDLGE 9
G+V P LGE
Sbjct: 97 GYVVPGLGE 105


>sp|RL15E_METB6|LARGE ribosomal subunit protein eL15|Methanoregula boonei (strain DSM

Query: 1 GWVRPD 6
W RPD
Sbjct: 12 AWARPD 17


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 5 PDLGEL 10
PDLGE+
Sbjct: 270 PDLGEI 275




25|Sequence|121|130|DLGELSKVTK

>sp|Y1073_CALMQ|UPF0173 metal-dependent hydrolase Cmaq_1073|Caldivirga maquilingensis

Query: 2 LGELSKV 8
LGELSKV
Sbjct: 36 LGELSKV 42


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DLGELSKVTK 10
DLG +S VTK
Sbjct: 289 DLGGVSPVTK 298


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DLGELSKVTK 10
DLG +S VTK
Sbjct: 289 DLGGVSPVTK 298


>sp|GLT_PYRHO|SODIUM-ASPARTATE symporter Glt(Ph)|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LGELSKVT 9
+GEL+KVT
Sbjct: 225 VGELAKVT 232


>sp|G6PI_METMP|PROBABLE glucose-6-phosphate isomerase|Methanococcus maripaludis (strain DSM

Query: 3 GELSKVTK 10
GEL K+TK
Sbjct: 174 GELEKITK 181


>sp|Y828_METBU|UPF0210 protein Mbur_0828|Methanococcoides burtonii (strain DSM 6242

Query: 1 DLGELSKVTK 10
DLGE+S+ K
Sbjct: 236 DLGEISEAIK 245


>sp|CEDB_SULAC|DNA import protein CedB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DLGELSKV 8
DLGELS +
Sbjct: 522 DLGELSDI 529


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLGELSKVTK 10
D+G+ SKV K
Sbjct: 361 DVGKFSKVVK 370


>sp|IORB_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorB|Archaeoglobus fulgidus (strain ATCC

Query: 2 LGELSKVT 9
+GEL KVT
Sbjct: 117 IGELRKVT 124


>sp|EF1A_CALMQ|ELONGATION factor 1-alpha|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 GELSKVTK 10
GELSK+ K
Sbjct: 179 GELSKILK 186




26|Sequence|126|135|SKVTKVKTDR

***** No hits found ******


27|Sequence|131|140|VKTDRPLPEN

>sp|DGGGP_META3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KTDRPLPEN 10
K +RPLP N
Sbjct: 72 KPNRPLPSN 80


>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 1 VKTDRPLP 8
+KTD PLP
Sbjct: 355 LKTDAPLP 362


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 RPLPEN 10
+PLPEN
Sbjct: 248 QPLPEN 253


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KTDRPLPE 9
+T RPLPE
Sbjct: 142 RTKRPLPE 149


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 VKTDRP 6
+KTDRP
Sbjct: 458 IKTDRP 463


>sp|SYE_NATPD|GLUTAMATE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 DRPLPE 9
DRPLPE
Sbjct: 93 DRPLPE 98


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 KTDRPLPE 9
+T RP+PE
Sbjct: 147 RTKRPMPE 154


>sp|DPCKG_METB6|GTP-DEPENDENT dephospho-CoA kinase|Methanoregula boonei (strain DSM 21154

Query: 2 KTDRPLPEN 10
KT+ P+P N
Sbjct: 160 KTESPIPHN 168


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 1 VKTDRPLPE 9
+KTD PL E
Sbjct: 355 IKTDAPLEE 363


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VKTDRPLPE 9
++ D PLPE
Sbjct: 309 IRDDGPLPE 317


>sp|Y1488_PYRFU|UPF0128 protein PF1488|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KTDRPLPEN 10
KT++ +PEN
Sbjct: 68 KTEKEIPEN 76


>sp|RHMD_CALMQ|PUTATIVE L-rhamnonate dehydratase|Caldivirga maquilingensis (strain ATCC

Query: 4 DRPLPEN 10
D P+P+N
Sbjct: 365 DEPIPQN 371


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 1 VKTDRPLP 8
VKT+ PLP
Sbjct: 355 VKTNAPLP 362




28|Sequence|136|145|PLPENPYHSR

>sp|PCNA_NITMS|DNA polymerase sliding clamp|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PLPENPYHSR 10
PLP+ PY S+
Sbjct: 122 PLPKIPYDSK 131


>sp|COFE_METMP|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PLPENPYHS 9
PLP+NP S
Sbjct: 125 PLPKNPDKS 133


>sp|COFE_METM7|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C7 /

Query: 1 PLPENPYHS 9
PLP+NP S
Sbjct: 125 PLPKNPDKS 133


>sp|COFE_METM6|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C6 /

Query: 1 PLPENPYHS 9
PLP+NP S
Sbjct: 125 PLPKNPDKS 133


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PLPENPYHS 9
P P PYHS
Sbjct: 236 PPPSPPYHS 244


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 NPYHSR 10
NPYH R
Sbjct: 365 NPYHPR 370


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 1 PLPENPY 7
P+P++PY
Sbjct: 169 PIPKSPY 175


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 1 PLPENPY 7
P+P++PY
Sbjct: 169 PIPKSPY 175


>sp|Y1361_METJA|UNCHARACTERIZED protein MJ1361|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PLPENP 6
PLP+NP
Sbjct: 138 PLPKNP 143


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 2 LPENPYH 8
+PEN YH
Sbjct: 550 IPENHYH 556


>sp|Y419_ARCFU|UNCHARACTERIZED protein AF_0419|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PLPENPYHS 9
PLP +P H+
Sbjct: 13 PLPGSPEHT 21


>sp|SYN_PYRFU|ASPARAGINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PLPENP 6
P+PENP
Sbjct: 105 PIPENP 110


>sp|SYN_PYRAB|ASPARAGINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PLPENP 6
P+PENP
Sbjct: 105 PIPENP 110


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 1 PLPENPY 7
P+P++PY
Sbjct: 169 PVPKSPY 175


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 PLPENPY 7
P+P++PY
Sbjct: 169 PVPKSPY 175


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 1 PLPENPY 7
P+P++PY
Sbjct: 169 PVPKSPY 175


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 PLPENPY 7
P+P++PY
Sbjct: 169 PVPKSPY 175


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 1 PLPENPY 7
P+P++PY
Sbjct: 169 PVPKSPY 175


>sp|SYN_PYRHO|ASPARAGINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PLPENP 6
P+PENP
Sbjct: 105 PIPENP 110


>sp|ASPD_METAC|L-ASPARTATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PLPENPYHS 9
P PENP S
Sbjct: 241 PSPENPKTS 249


>sp|DCD_ACIAM|DCTP deaminase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 4 ENPYHSR 10
ENPYH +
Sbjct: 152 ENPYHGK 158


>sp|COFH_HALMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Haloarcula marismortui (strain ATCC

Query: 3 PENPYHSR 10
PE YH+R
Sbjct: 207 PEEAYHAR 214


>sp|IF5A_KORCO|TRANSLATION initiation factor 5A|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PLPENP 6
PLPE+P
Sbjct: 99 PLPEDP 104


>sp|ASPD_METBF|L-ASPARTATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PLPENPYHS 9
P PENP S
Sbjct: 241 PSPENPKTS 249


>sp|RNP4_METMA|RIBONUCLEASE P protein component 4|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LPENPYHSR 10
LPENP SR
Sbjct: 32 LPENPERSR 40


>sp|ASPD_METMA|L-ASPARTATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PLPENPYHS 9
P PENP S
Sbjct: 241 PSPENPKTS 249


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPENPYHS 9
LP NPY++
Sbjct: 56 LPSNPYYT 63


>sp|THYX_PYRAE|FLAVIN-DEPENDENT thymidylate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PLPENPYHS 9
PLPE P+ S
Sbjct: 231 PLPETPWLS 239


>sp|BIOD_NITMS|ATP-DEPENDENT dethiobiotin synthetase BioD|Nitrosopumilus maritimus (strain

Query: 1 PLPENPY 7
P+P +PY
Sbjct: 76 PIPASPY 82


>sp|DCD_THEAC|DCTP deaminase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 ENPYHSR 10
E PYH R
Sbjct: 133 EKPYHIR 139


>sp|RL30_METMA|LARGE ribosomal subunit protein uL30|Methanosarcina mazei (strain ATCC

Query: 2 LPENPYH 8
LPENP++
Sbjct: 35 LPENPHY 41


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PLPENPYH 8
P P +P+H
Sbjct: 36 PYPNSPFH 43


>sp|HEM1_HYPBU|GLUTAMYL-TRNA reductase|Hyperthermus butylicus (strain DSM 5456

Query: 1 PLPENPYHS 9
P+P N Y++
Sbjct: 274 PIPSNVYYA 282


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PLPENPYH 8
P P +P+H
Sbjct: 35 PYPNSPFH 42


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 PLPENPYH 8
P P +P+H
Sbjct: 47 PYPNSPFH 54


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PLPENPYH 8
P P +P+H
Sbjct: 36 PYPNSPWH 43


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 LPENPYHSR 10
LPE P H R
Sbjct: 122 LPEEPDHDR 130


>sp|RNP4_METAC|RIBONUCLEASE P protein component 4|Methanosarcina acetivorans (strain ATCC

Query: 2 LPENPYHSR 10
PENP SR
Sbjct: 32 FPENPERSR 40


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PLPENP 6
PLP NP
Sbjct: 200 PLPANP 205




29|Sequence|141|150|PYHSRPRPDP

>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PYHSRPRPDP 10
PY +RPRP P
Sbjct: 524 PYENRPRPKP 533


>sp|SPEE_THEAC|POLYAMINE aminopropyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 PYHSRPRP 8
PYH PRP
Sbjct: 72 PYHLTPRP 79


>sp|DAPA_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PYHSRPRP 8
PY+++P+P
Sbjct: 106 PYYNKPQP 113


>sp|DCDA_METTH|DIAMINOPIMELATE decarboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 YHSRPRP 8
Y+SRPRP
Sbjct: 387 YNSRPRP 393


>sp|DAPA_METBF|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PYHSRPRP 8
PY+++P P
Sbjct: 103 PYYNKPNP 110


>sp|DAPA_METAC|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PYHSRPRP 8
PY+++P P
Sbjct: 103 PYYNKPNP 110


>sp|DAPA_METMA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PYHSRPRP 8
PY+++P P
Sbjct: 103 PYYNKPNP 110


>sp|DCDA_THEAC|DIAMINOPIMELATE decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YHSRPRP 8
Y+ RPRP
Sbjct: 368 YNGRPRP 374


>sp|ENO_THEVO|ENOLASE volcanium (strain ATCC 51530

Query: 3 HSRPRP 8
HS PRP
Sbjct: 131 HSMPRP 136


>sp|JAMM1_HALVD|DESAMPYLASE volcanii (strain ATCC 29605

Query: 2 YHSRPRPDP 10
YHS P DP
Sbjct: 87 YHSHPESDP 95


>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain ATCC

Query: 1 PYHSRPRPDP 10
P HS PDP
Sbjct: 134 PSHSLDFPDP 143


>sp|CBID_METTH|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanothermobacter thermautotrophicus

Query: 5 RPRPDP 10
RP PDP
Sbjct: 65 RPYPDP 70


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 2 YHSRPRPD 9
YHS+ RP+
Sbjct: 202 YHSKVRPN 209


>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 2 YHSRPRPD 9
YHS+ RP+
Sbjct: 202 YHSKVRPN 209


>sp|GLCDH_HALSA|GLUCOSE 1-dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 5 RPRPDP 10
RPRPDP
Sbjct: 18 RPRPDP 23


>sp|TCPA_THEAD|NAD(+) hydrolase TcpA|Theionarchaea archaeon (strain DG-70-1)

Query: 2 YHSRP 6
YHSRP
Sbjct: 80 YHSRP 84


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PYHSRPRPD 9
PY P PD
Sbjct: 137 PYEDIPAPD 145


>sp|DHE3_PYREN|GLUTAMATE dehydrogenase|Pyrococcus endeavori

Query: 1 PYHSRPRPD 9
PY P PD
Sbjct: 137 PYEDIPAPD 145


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 PYHSRPRPD 9
PY P PD
Sbjct: 137 PYEDIPAPD 145


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 1 PYHSRPRPD 9
PY P PD
Sbjct: 137 PYEDIPAPD 145


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PYHSRPRPD 9
PY P PD
Sbjct: 137 PYEDIPAPD 145




30|Sequence|146|155|PRPDPSPEIE

>sp|GLCDH_HALSA|GLUCOSE 1-dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PRPDPSP 7
PRPDP+P
Sbjct: 19 PRPDPTP 25


>sp|FAU1_PYRNV|PROBABLE ribonuclease FAU-1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RPDPSP 7
RPDPSP
Sbjct: 39 RPDPSP 44


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PRPDPSPEIE 10
P PDP +E
Sbjct: 166 PSPDPKGHVE 175


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 1 PRPDPSPEIE 10
PRP P PE++
Sbjct: 89 PRPLPKPEMQ 98


>sp|CPKA_PYRHO|CARBAMATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PRPDPSPEIE 10
P PDP +E
Sbjct: 166 PSPDPKGHVE 175


>sp|OTC_ARCFU|ORNITHINE carbamoyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DPSPEI 9
DP+PEI
Sbjct: 185 DPNPEI 190


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 RPDPSPE 8
RPD SPE
Sbjct: 566 RPDKSPE 572


>sp|CPKA_THEKO|CARBAMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PRPDPSPEIE 10
P PDP +E
Sbjct: 166 PSPDPKGHVE 175


>sp|CPKA_PYRAB|CARBAMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 PRPDPSPEIE 10
P PDP +E
Sbjct: 166 PSPDPKRHVE 175


>sp|GLNB2_METTM|NITROGEN fixation nifHD region GlnB-like|Methanothermobacter marburgensis

Query: 3 PDPSPEIE 10
P PSPEI+
Sbjct: 49 PSPSPEID 56


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 PRPDPSPEI 9
P+P P P++
Sbjct: 118 PQPHPYPDL 126




31|Sequence|151|160|SPEIEGDLQP

>sp|RS4E_AERPE|SMALL ribosomal subunit protein eS4|Aeropyrum pernix (strain ATCC 700893

Query: 2 PEIEGDLQP 10
PE EGDL+P
Sbjct: 116 PEEEGDLKP 124


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 5 EGDLQP 10
EGDLQP
Sbjct: 167 EGDLQP 172


>sp|FTSZ2_PYRAB|CELL division protein FtsZ 2|Pyrococcus abyssi (strain GE5 /

Query: 1 SPEIEGDLQP 10
SP+I G+++P
Sbjct: 346 SPQILGNIEP 355


>sp|Y934_PYRNV|UPF0282 protein Tneu_0934|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PEIEGDLQP 10
P++EG L+P
Sbjct: 183 PDVEGPLEP 191


>sp|RL18_METMJ|LARGE ribosomal subunit protein uL18|Methanoculleus marisnigri (strain

Query: 2 PEIEGD 7
PE+EGD
Sbjct: 51 PEVEGD 56


>sp|LEUC_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 4 IEGDLQP 10
I GDLQP
Sbjct: 164 ITGDLQP 170


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PEIEGDLQP 10
PE EG ++P
Sbjct: 285 PEFEGVIEP 293


Query: 3 EIEGDLQ 9
EIEGD++
Sbjct: 1188 EIEGDIE 1194


>sp|DGGGP_METM7|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 3 EIEGDLQ 9
+IEGD+Q
Sbjct: 178 DIEGDIQ 184


>sp|DGGGP_METM5|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 3 EIEGDLQ 9
+IEGD+Q
Sbjct: 178 DIEGDIQ 184


>sp|ILVC_METM5|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C5 /

Query: 4 IEGDLQ 9
IEGDLQ
Sbjct: 307 IEGDLQ 312


>sp|PDXT_PICTO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Picrophilus torridus (strain

Query: 2 PEIEGDLQ 9
PE+ GDL+
Sbjct: 170 PELTGDLR 177


>sp|Y021_PYRIL|UPF0282 protein Pisl_0021|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PEIEGDLQP 10
P++EG L+P
Sbjct: 183 PDVEGPLEP 191


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 EIEGDLQP 10
E+EGDL P
Sbjct: 625 EVEGDLTP 632


>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM

Query: 1 SPEIEGD 7
SPE+EG+
Sbjct: 19 SPEVEGN 25


>sp|CSD_METTH|PROBABLE cysteine desulfurase|Methanothermobacter thermautotrophicus (strain

Query: 1 SPEIEGDLQP 10
S +++G+L+P
Sbjct: 230 STDVQGELEP 239


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 1 SPEIEGDL 8
SPE+ GD
Sbjct: 220 SPEVSGDF 227


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 1 SPEIEG 6
SPEIEG
Sbjct: 477 SPEIEG 482


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 1 SPEIEG 6
SPEIEG
Sbjct: 477 SPEIEG 482


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 SPEIEG 6
SPEIEG
Sbjct: 477 SPEIEG 482


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 1 SPEIEG 6
SPEIEG
Sbjct: 477 SPEIEG 482


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 1 SPEIEG 6
SPEIEG
Sbjct: 477 SPEIEG 482


>sp|ARFB_METTM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter marburgensis

Query: 4 IEGDLQP 10
+EGDL+P
Sbjct: 84 LEGDLKP 90


>sp|PYRE_METTH|OROTATE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 1 SPEIEGDLQ 9
S IEGDLQ
Sbjct: 104 SKLIEGDLQ 112




32|Sequence|156|165|GDLQPATHGS

>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GDLQPATHGS 10
G QPA HG+
Sbjct: 547 GGGQPADHGT 556


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GDLQPATHG 9
G QPA HG
Sbjct: 531 GGGQPADHG 539


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 GDLQPATHG 9
G QPA HG
Sbjct: 526 GGGQPADHG 534


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 1 GDLQPATHG 9
G + PA HG
Sbjct: 48 GTMNPAQHG 56


>sp|COFD_ARCFU|2-PHOSPHO-L-LACTATE transferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDLQPATH 8
GDL ATH
Sbjct: 86 GDLDRATH 93


>sp|RS13_METMP|SMALL ribosomal subunit protein uS13|Methanococcus maripaludis (strain

Query: 5 PATHG 9
PATHG
Sbjct: 71 PATHG 75


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GDLQPATHG 9
G + PA HG
Sbjct: 48 GTMNPAQHG 56


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 1 GDLQPATHG 9
G PATHG
Sbjct: 191 GPHHPATHG 199


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GDLQPATHG 9
G + PA HG
Sbjct: 48 GTMNPAQHG 56


>sp|HDRC_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit C|Methanothermobacter

Query: 1 GDLQPATH 8
G+L P TH
Sbjct: 146 GELPPTTH 153


>sp|HDRC_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit C|Methanothermobacter

Query: 1 GDLQPATH 8
G+L P TH
Sbjct: 146 GELPPTTH 153


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GDLQPATHG 9
G + PA HG
Sbjct: 48 GTMNPAQHG 56


>sp|PURO_METMP|IMP cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GDLQPATHGS 10
GD+ AT+GS
Sbjct: 66 GDVAVATNGS 75


>sp|PURO_METM6|IMP cyclohydrolase|Methanococcus maripaludis (strain C6 /

Query: 1 GDLQPATHGS 10
GD+ AT+GS
Sbjct: 66 GDVAVATNGS 75


>sp|PURO_METM5|IMP cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 1 GDLQPATHGS 10
GD+ AT+GS
Sbjct: 66 GDVAVATNGS 75


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GDLQPATHGS 10
G QPA HG+
Sbjct: 555 GGGQPADHGT 564




33|Sequence|161|172|ATHGSRFYFWTK

>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 THGSRFYFW 10
T G +FYFW
Sbjct: 337 TPGWKFYFW 345


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HGSRFYFWTK 12
H S FY+W K
Sbjct: 944 HRSMFYYWLK 953


>sp|SYS_THEAC|SERINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GSRFYF 9
GSRFYF
Sbjct: 180 GSRFYF 185


>sp|RL4_METHJ|LARGE ribosomal subunit protein uL4|Methanospirillum hungatei JF-1

Query: 1 ATHGSRFYFWTK 12
TH +R WT+
Sbjct: 228 GTHSARLTLWTE 239


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain NA1)

Query: 1 ATHGSRFYFWTK 12
TH R WTK
Sbjct: 233 GTHPGRLTIWTK 244


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 1 ATHGSRFYFWTK 12
TH R WTK
Sbjct: 233 GTHPGRLTIWTK 244


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 1 ATHGSRFYFWTK 12
TH R WTK
Sbjct: 233 GTHPGRLTIWTK 244


>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 5 SRFYFWTK 12
+++Y WTK
Sbjct: 390 TKYYMWTK 397


>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 THGSRFYFW 10
T G +FY+W
Sbjct: 337 TPGWKFYYW 345


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 THGSRFYFW 10
T G +FY+W
Sbjct: 337 TPGWKFYYW 345


>sp|SYP_PYRNV|PROLINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 THGSRFYFW 10
T G +FY+W
Sbjct: 336 TPGWKFYYW 344


>sp|SYP_PYRIL|PROLINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 THGSRFYFW 10
T G +FY+W
Sbjct: 337 TPGWKFYYW 345


>sp|IF6_NANEQ|TRANSLATION initiation factor 6|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 GSRFYFWTK 12
G+ +Y+W K
Sbjct: 101 GNNYYYWPK 109


>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 GSRFYFW 10
G++FY+W
Sbjct: 338 GAKFYYW 344


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 8 YFWTK 12
YFWTK
Sbjct: 26 YFWTK 30


>sp|RL4_METBF|LARGE ribosomal subunit protein uL4|Methanosarcina barkeri (strain Fusaro

Query: 1 ATHGSRFYFWTK 12
TH R WT+
Sbjct: 231 GTHAGRLTIWTE 242


>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 HGSRFYFWT 11
HGSR YF T
Sbjct: 90 HGSRDYFQT 98


>sp|RL4_METBU|LARGE ribosomal subunit protein uL4|Methanococcoides burtonii (strain DSM

Query: 1 ATHGSRFYFWTK 12
TH R WT+
Sbjct: 231 GTHAGRLTVWTQ 242


>sp|CCA_PYRFU|CCA-ADDING enzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 2 THGSRFY 8
+HG RFY
Sbjct: 367 SHGRRFY 373


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 GSRFYFW 10
G+++Y+W
Sbjct: 333 GAKYYYW 339


>sp|RL4_METMA|LARGE ribosomal subunit protein uL4|Methanosarcina mazei (strain ATCC

Query: 1 ATHGSRFYFWTK 12
TH R WT+
Sbjct: 231 GTHAGRLTVWTE 242


>sp|RL4_METAC|LARGE ribosomal subunit protein uL4|Methanosarcina acetivorans (strain

Query: 1 ATHGSRFYFWTK 12
TH R WT+
Sbjct: 231 GTHAGRLTVWTE 242


>sp|PUR8_METJA|ADENYLOSUCCINATE lyase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 THGSRFYFW 10
T+G RF W
Sbjct: 170 TYGMRFALW 178


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 HGSRFY 8
HG RFY
Sbjct: 368 HGKRFY 373


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GSRFYF 9
G+RFYF
Sbjct: 180 GARFYF 185


>sp|SYS_PICTO|SERINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 GSRFYF 9
G+RFYF
Sbjct: 179 GARFYF 184


>sp|MPGP_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 THGSRFY 8
T GSRFY
Sbjct: 166 TMGSRFY 172


>sp|MPGP_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 THGSRFY 8
T GSRFY
Sbjct: 166 TMGSRFY 172


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 182 GSRFYY 187


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 182 GSRFYY 187


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 182 GSRFYY 187


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 182 GSRFYY 187


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 182 GSRFYY 187


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 182 GSRFYY 187


>sp|SYS_PYRIL|SERINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 176 GSRFYY 181


>sp|SYS_METST|SERINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 159 GSRFYY 164


>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 182 GSRFYY 187


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 185 GSRFYY 190


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 185 GSRFYY 190


>sp|DNLI1_METBF|DNA ligase 1|Methanosarcina barkeri (strain Fusaro /

Query: 4 GSRFYFWTK 12
G R +FW K
Sbjct: 385 GKRSWFWLK 393


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain ATCC

Query: 2 THGSRFYF 9
+HG FYF
Sbjct: 106 SHGLHFYF 113


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 2 THGSRFYF 9
+HG FYF
Sbjct: 106 SHGLHFYF 113


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 2 THGSRFYF 9
+HG FYF
Sbjct: 106 SHGLHFYF 113


>sp|CCA_HALSA|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 700922

Query: 1 ATHGSRFY 8
TH RFY
Sbjct: 360 GTHAERFY 367


>sp|CCA_HALS3|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 29341

Query: 1 ATHGSRFY 8
TH RFY
Sbjct: 360 GTHAERFY 367


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 182 GSRFYY 187


>sp|RIFK_CENSY|RIBOFLAVIN kinase|Cenarchaeum symbiosum (strain A)

Query: 2 THGSRFYFWTK 12
T G R Y W K
Sbjct: 126 TDGKRSYGWVK 136


>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 2 THGSRFY 8
T GSRFY
Sbjct: 166 TMGSRFY 172


>sp|SYS_SACS2|SERINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 182 GSRFYY 187


>sp|PUR8_ARCFU|ADENYLOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 THGSRFYFW 10
T+G RF W
Sbjct: 153 TYGFRFALW 161


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 182 GSRFYY 187


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 182 GSRFYY 187


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 177 GSRFYY 182


>sp|PURO_METS3|IMP cyclohydrolase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ATHGSRFY 8
+T+GS+FY
Sbjct: 153 STYGSQFY 160


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 8 YFWTK 12
YFWT+
Sbjct: 23 YFWTR 27


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 8 YFWTK 12
YFWT+
Sbjct: 23 YFWTR 27


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 8 YFWTK 12
YFWT+
Sbjct: 29 YFWTR 33


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 182 GSRFYY 187


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 184 GSRFYY 189


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 177 GSRFYY 182


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 182 GSRFYY 187


>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GSRFYFWTK 12
G+R YF+T+
Sbjct: 149 GNRAYFYTE 157


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 175 GSRFYY 180


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GSRFYFWTK 12
G R +FW K
Sbjct: 417 GKRSWFWFK 425


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GSRFYFWTK 12
GSR + W K
Sbjct: 425 GSRGFLWIK 433


>sp|PSB_METTH|PROTEASOME subunit beta|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 HGSRFY 8
H SRFY
Sbjct: 97 HSSRFY 102


>sp|ASSTI_METJA|L-ASPARTATE semialdehyde sulfurtransferase iron-sulfur

Query: 6 RFYFWT 11
R Y+WT
Sbjct: 4 RVYYWT 9


>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 GSRFYF 9
GSRFY+
Sbjct: 184 GSRFYY 189


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 8 YFWTK 12
YFWT+
Sbjct: 29 YFWTQ 33


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 GSRFYFW 10
GS++Y W
Sbjct: 334 GSKYYKW 340


>sp|CSM4_THEON|CRISPR system Cms protein Csm4|Thermococcus onnurineus (strain NA1)

Query: 2 THGSRFYFW 10
T S YFW
Sbjct: 138 TQDSSIYFW 146


>sp|Y314_METJA|UNCHARACTERIZED protein MJ0314|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 7 FYFWTK 12
FY+W K
Sbjct: 174 FYYWYK 179


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 3 HGSRFYFW 10
HG Y W
Sbjct: 99 HGRHLYHW 106


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 GSRFYFW 10
G+++Y+W
Sbjct: 333 GAKYYWW 339


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 5 SRFYFWTK 12
+RFY W K
Sbjct: 436 ARFYDWIK 443


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 GSRFYFWTK 12
G ++Y W K
Sbjct: 323 GKKYYEWEK 331






THE END