1|Sequence|1|10|MAAAAASRGV
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 AAAAASRG 9
A+AAA+RG
Sbjct: 761 ASAAATRG 768
2|Sequence|6|15|ASRGVGAKLG
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 RGVGAK 8
RGVGA+
Sbjct: 217 RGVGAR 222
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 RGVGAK 8
+GVGAK
Sbjct: 218 KGVGAK 223
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 RGVGAK 8
+GVGAK
Sbjct: 218 KGVGAK 223
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 RGVGAK 8
+GVGAK
Sbjct: 217 KGVGAK 222
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 RGVGAK 8
+GVGAK
Sbjct: 218 KGVGAK 223
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 RGVGAK 8
+GVGAK
Sbjct: 218 KGVGAK 223
3|Sequence|11|20|GAKLGLREIR
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 GAKLGLREIR 10
G +LG+RE+R
Sbjct: 41 GPQLGVREVR 50
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 4 LGLREIR 10
LGL EIR
Sbjct: 403 LGLTEIR 409
4|Sequence|16|25|LREIRIHLCQ
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 EIRIHLC 9
IR+HLC
Sbjct: 75 SIRVHLC 81
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 EIRIHLC 9
IR+HLC
Sbjct: 75 SIRVHLC 81
>sp|NSP4_ROTHC|NON-STRUCTURAL glycoprotein 4|Rotavirus C (isolate RVC/Human/United
Query: 1 LREIRIHL 8
+RE+RIH+
Sbjct: 85 IREMRIHM 92
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LREIRIHLC 9
LRE+ LC
Sbjct: 944 LREVYTQLC 952
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LREIRIHLC 9
LRE+ LC
Sbjct: 944 LREVYTQLC 952
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LREIRIHLC 9
LRE+ LC
Sbjct: 944 LREVYTQLC 952
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LREIRIHLC 9
LRE+ LC
Sbjct: 944 LREVYTQLC 952
>sp|KBZIP_HHV8P|E3 SUMO-protein ligase K-bZIP|Human herpesvirus 8 type P
Query: 1 LREIRIHLCQ 10
LR++ + +CQ
Sbjct: 264 LRDMLMRMCQ 273
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 2 REIRIHLCQ 10
RE+ LCQ
Sbjct: 252 REVADELCQ 260
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LREIRIHL 8
L E+R HL
Sbjct: 775 LNELRTHL 782
5|Sequence|21|30|IHLCQRSPGS
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 IHLCQRSPG 9
+ LC RSPG
Sbjct: 1923 MSLCHRSPG 1931
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 4 CQRSPGS 10
C+R PGS
Sbjct: 155 CKRGPGS 161
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 4 CQRSPGS 10
C+R PGS
Sbjct: 155 CKRGPGS 161
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 4 CQRSPGS 10
C+R PGS
Sbjct: 155 CKRGPGS 161
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 1 IHLCQRSPGS 10
+ +C+ SPGS
Sbjct: 12 VAVCEESPGS 21
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 4 CQRSPGS 10
C+R PGS
Sbjct: 139 CKRGPGS 145
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 IHLCQRSPG 9
IHL SPG
Sbjct: 3464 IHLTSDSPG 3472
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 4 CQRSPGS 10
C+R PG+
Sbjct: 155 CKRGPGN 161
>sp|IR03_HCMVA|UNCHARACTERIZED protein IRL3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CQRSPG 9
C+R PG
Sbjct: 34 CRRRPG 39
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 4 CQRSPGS 10
CQ +PG+
Sbjct: 1002 CQATPGA 1008
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 IHLCQRSPG 9
+H+C R+ G
Sbjct: 190 LHVCFRTDG 198
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 IHLCQRSPG 9
+H C R P
Sbjct: 5409 LHKCYRCPA 5417
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 IHLCQRSPG 9
+H C R P
Sbjct: 5434 LHKCYRCPA 5442
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 CQRSPGS 10
CQR P S
Sbjct: 249 CQREPFS 255
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 CQRSPGS 10
CQR P S
Sbjct: 249 CQREPFS 255
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 CQRSPGS 10
CQR P S
Sbjct: 249 CQREPFS 255
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 IHLCQ 5
+H+CQ
Sbjct: 907 VHMCQ 911
6|Sequence|26|35|RSPGSQGVRD
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RSPGSQGVRD 10
RSP Q VRD
Sbjct: 32 RSPCLQPVRD 41
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RSPGSQGVRD 10
RSP Q VRD
Sbjct: 32 RSPCLQPVRD 41
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 RSPGSQGVRD 10
RS SQ VRD
Sbjct: 1470 RSIDSQEVRD 1479
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 SPGSQGVRD 10
SPG++ RD
Sbjct: 73 SPGTRATRD 81
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 2 SPGSQGVRD 10
SPG++ RD
Sbjct: 73 SPGTRATRD 81
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 RSPGSQGVRD 10
+S GS+ VRD
Sbjct: 1625 KSMGSKCVRD 1634
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 RSPGSQGVRD 10
+S GS+ VRD
Sbjct: 1623 KSMGSKCVRD 1632
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 RSPGSQGVRD 10
+S GS+ VRD
Sbjct: 1622 KSMGSKCVRD 1631
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 RSPGSQGVRD 10
+S GS+ VRD
Sbjct: 1613 KSMGSKCVRD 1622
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 RSPGSQGVRD 10
+S GS+ VRD
Sbjct: 1621 KSMGSKCVRD 1630
>sp|M2_I30A0|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 RSPGSQGVRD 10
R P ++GV D
Sbjct: 61 RGPSTEGVPD 70
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 SPGSQGVR 9
SPG+ GV+
Sbjct: 342 SPGAPGVK 349
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 RSPGSQ 6
RSPG Q
Sbjct: 2053 RSPGGQ 2058
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 2 SPGSQGVR 9
SPG+ GV+
Sbjct: 343 SPGAPGVK 350
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RSPGSQGVRD 10
RSP VRD
Sbjct: 590 RSPSQMSVRD 599
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 2 SPGSQGVR 9
SPG+ GV+
Sbjct: 343 SPGAPGVK 350
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 2 SPGSQGVR 9
SPG+ G++
Sbjct: 341 SPGAPGIK 348
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 2 SPGSQGVR 9
SPG+ G++
Sbjct: 341 SPGAPGIK 348
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 RSPGSQG 7
R PGS+G
Sbjct: 737 RDPGSRG 743
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 RSPGSQG 7
R PGS+G
Sbjct: 737 RDPGSRG 743
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RSPGSQGVRD 10
RSP VRD
Sbjct: 590 RSPSQMSVRD 599
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RSPGSQGVRD 10
RSP VRD
Sbjct: 571 RSPSQMSVRD 580
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 RSPGSQG 7
R PGS+G
Sbjct: 738 RDPGSRG 744
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 2 SPGSQGVR 9
SPG G+R
Sbjct: 293 SPGEVGIR 300
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RSPGSQGVRD 10
+ PG++ +RD
Sbjct: 280 QKPGAEHMRD 289
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RSPGSQGVRD 10
+ PG++ +RD
Sbjct: 280 QKPGAEHMRD 289
7|Sequence|31|40|QGVRDFIEKR
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 QGVRDFIEK 9
QGVRD++E+
Sbjct: 1000 QGVRDYVEQ 1008
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 1010 QGVKDYVEQ 1018
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 1009 QGVKDYVEQ 1017
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 1011 QGVKDYVEQ 1019
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 1009 QGVKDYVEQ 1017
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 1019 QGVKDYVEQ 1027
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 1007 QGVKDYVEQ 1015
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 1012 QGVKDYVEQ 1020
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 1000 QGVKDYVEQ 1008
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 1001 QGVKDYVEQ 1009
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 999 QGVKDYVEQ 1007
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 1001 QGVKDYVEQ 1009
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 1001 QGVKDYVEQ 1009
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 1003 QGVKDYVEQ 1011
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 998 QGVKDYVEQ 1006
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 1017 QGVKDYVEQ 1025
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 QGVRDFIEK 9
QGV+D++E+
Sbjct: 999 QGVKDYVEE 1007
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 QGVRDFIEKR 10
Q VRD+ EK+
Sbjct: 1484 QEVRDYCEKK 1493
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 QGVRDFIEKR 10
Q VRD+ EK+
Sbjct: 1484 QEVRDYCEKK 1493
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 QGVRDFIEKR 10
Q VRD+ EK+
Sbjct: 1485 QEVRDYCEKK 1494
Query: 1 QGVRDFIE 8
QGV ++IE
Sbjct: 1028 QGVSNYIE 1035
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 QGVRDFIEKR 10
Q VRD+ EK+
Sbjct: 1485 QEVRDYCEKK 1494
Query: 1 QGVRDFIE 8
QGV ++IE
Sbjct: 1028 QGVSNYIE 1035
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 QGVRDFIEKR 10
Q VRD+ EK+
Sbjct: 1487 QEVRDYCEKK 1496
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 QGVRDFIEKR 10
Q VRD+ EK+
Sbjct: 1487 QEVRDYCEKK 1496
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 QGVRDFIEKR 10
Q VRD+ EK+
Sbjct: 1484 QEVRDYCEKK 1493
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 QGVRDF 6
QGVRD+
Sbjct: 1253 QGVRDY 1258
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 QGVRDF 6
QGVRD+
Sbjct: 1250 QGVRDY 1255
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 QGVRDF 6
+GVRDF
Sbjct: 127 EGVRDF 132
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 QGVRDFIEKR 10
Q +RD+ EK+
Sbjct: 1492 QELRDYCEKK 1501
>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)
Query: 1 QGVRDFI 7
QGV+D+I
Sbjct: 176 QGVQDYI 182
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 1 QGVRDFI 7
QGV+D+I
Sbjct: 176 QGVQDYI 182
>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)
Query: 1 QGVRDFI 7
QGV+D+I
Sbjct: 176 QGVQDYI 182
>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)
Query: 1 QGVRDFI 7
QGV+D+I
Sbjct: 176 QGVQDYI 182
>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 QGVRDFI 7
QGV+D+I
Sbjct: 179 QGVQDYI 185
>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)
Query: 1 QGVRDFI 7
QGV+D+I
Sbjct: 176 QGVQDYI 182
>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)
Query: 1 QGVRDFI 7
QGV+D+I
Sbjct: 176 QGVQDYI 182
>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)
Query: 1 QGVRDFI 7
QGV+D+I
Sbjct: 176 QGVQDYI 182
>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 QGVRDFI 7
QGV+D+I
Sbjct: 176 QGVQDYI 182
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 QGVRDFI 7
QGV+D+I
Sbjct: 176 QGVQDYI 182
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QGVRDFIEKR 10
QG+ DFI ++
Sbjct: 905 QGLPDFISRQ 914
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QGVRDFIEKR 10
QG+ DFI ++
Sbjct: 905 QGLPDFISRQ 914
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 QGVRDF 6
+GVRDF
Sbjct: 127 EGVRDF 132
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 3 VRDFIEK 9
+RDF+EK
Sbjct: 236 IRDFMEK 242
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 1 QGVRDFIEK 9
+GVRD + K
Sbjct: 36 RGVRDLLSK 44
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 QGVRDFIE 8
QGV D+I+
Sbjct: 1012 QGVSDYIK 1019
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 QGVRDFIE 8
QGV D+I+
Sbjct: 1012 QGVSDYIK 1019
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 QGVRDFIE 8
QGV D+I+
Sbjct: 1012 QGVSDYIK 1019
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 QGVRDFIE 8
QGV D+I+
Sbjct: 1012 QGVSDYIK 1019
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 QGVRDFIE 8
QGV D+I+
Sbjct: 1012 QGVSDYIK 1019
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 QGVRDFIE 8
QG+ D++E
Sbjct: 1008 QGLSDYVE 1015
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 QGVRDFIE 8
QG+ D+I+
Sbjct: 1014 QGITDYIQ 1021
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QGVRDF 6
QGV DF
Sbjct: 1127 QGVEDF 1132
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QGVRDF 6
QGV DF
Sbjct: 1127 QGVEDF 1132
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 QGVRDFI 7
QGV D+I
Sbjct: 992 QGVTDYI 998
8|Sequence|36|45|FIEKRYVELK
***** No hits found ******
9|Sequence|41|50|YVELKKANPD
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 YVELKKANPD 10
Y++L K PD
Sbjct: 309 YIQLAKGGPD 318
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YVELKKANPD 10
Y++L K PD
Sbjct: 309 YIQLAKGGPD 318
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 YVELKKANPD 10
Y ELKK N D
Sbjct: 48 YFELKKPNGD 57
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 YVELKKANPD 10
Y ELKK N D
Sbjct: 48 YFELKKPNGD 57
>sp|NCAP_NIPAV|NUCLEOPROTEIN virus
Query: 1 YVELKKANP 9
YV+ K+ NP
Sbjct: 197 YVQQKRVNP 205
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 YVELKKANP 9
YV+ K+ NP
Sbjct: 197 YVQQKRVNP 205
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 LKKANPD 10
+KANPD
Sbjct: 783 FRKANPD 789
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 LKKANPD 10
+KANPD
Sbjct: 782 FRKANPD 788
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 LKKANPD 10
+KANPD
Sbjct: 782 FRKANPD 788
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 LKKANPD 10
+KANPD
Sbjct: 781 FRKANPD 787
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 LKKANPD 10
+KANPD
Sbjct: 781 FRKANPD 787
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 LKKANPD 10
+KANPD
Sbjct: 782 FRKANPD 788
>sp|VE8E2_HPV65|PROTEIN E8^E2C|Human papillomavirus 65
Query: 1 YVELKKANP 9
Y EL +A+P
Sbjct: 31 YTELTQASP 39
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 1 YVELKKANP 9
Y EL +A+P
Sbjct: 223 YTELTQASP 231
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YVELKKANPD 10
Y EL+ NPD
Sbjct: 63 YRELRFHNPD 72
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 1 YVELKKANPD 10
Y EL+ NPD
Sbjct: 63 YRELRFHNPD 72
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 5 KKANP 9
KKANP
Sbjct: 283 KKANP 287
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 YVELKKANP 9
+ EL K NP
Sbjct: 494 WYELSKINP 502
10|Sequence|46|55|KANPDLPILI
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 3 NPDLPILI 10
NPDLPI +
Sbjct: 379 NPDLPICV 386
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 3 NPDLPILI 10
NPDLP++I
Sbjct: 484 NPDLPVVI 491
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KANPDLPIL 9
KANPD+ I+
Sbjct: 783 KANPDVIIV 791
>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19
Query: 4 PDLPILI 10
PDLP++I
Sbjct: 487 PDLPVVI 493
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 KANPDLPIL 9
K N D+P+L
Sbjct: 703 KLNQDMPVL 711
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KANPDLPIL 9
KANPD+ ++
Sbjct: 784 KANPDIILI 792
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 4 PDLPILI 10
PDLP++I
Sbjct: 487 PDLPVVI 493
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 4 PDLPILI 10
PDLP++I
Sbjct: 487 PDLPVVI 493
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 4 PDLPILI 10
PDLP++I
Sbjct: 486 PDLPVVI 492
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KANPDLPIL 9
KANPD+ ++
Sbjct: 785 KANPDVILI 793
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KANPDL 6
KANPD+
Sbjct: 784 KANPDV 789
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KANPDLPIL 9
KANPD+ ++
Sbjct: 783 KANPDVILI 791
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KANPDLPIL 9
KANPD+ ++
Sbjct: 784 KANPDVILI 792
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 NPDLPI 8
NP LPI
Sbjct: 1503 NPTLPI 1508
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 PDLPILI 10
PD PI++
Sbjct: 155 PDTPIIL 161
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 KANPDLPILI 10
+A P++P+++
Sbjct: 1914 RATPNIPLIL 1923
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 KANPDLPILI 10
+A P++P+++
Sbjct: 1914 RATPNIPLIL 1923
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 KANPDLPILI 10
+A P++P+++
Sbjct: 1914 RATPNIPLIL 1923
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 4 PDLPI 8
PDLPI
Sbjct: 493 PDLPI 497
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 4 PDLPILI 10
PD+P++I
Sbjct: 486 PDIPVVI 492
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 ANPDLPILI 10
A P LPI +
Sbjct: 303 ATPSLPITV 311
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 KANPDLPILI 10
K + +LPILI
Sbjct: 792 KQHVNLPILI 801
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PDLPILI 10
PDLP+++
Sbjct: 274 PDLPVML 280
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 3 NPDLPI 8
NPD P+
Sbjct: 369 NPDFPL 374
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 3 NPDLPI 8
NPD P+
Sbjct: 369 NPDFPL 374
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ANPDLPI 8
ANP +P+
Sbjct: 254 ANPPVPV 260
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 4 PDLPILI 10
PD+P++I
Sbjct: 486 PDIPVVI 492
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ANPDLPI 8
ANP +P+
Sbjct: 254 ANPPVPV 260
11|Sequence|51|60|LPILIRECSD
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 LPILIRECSD 10
LP LIREC D
Sbjct: 1699 LPELIRECID 1708
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 LPILIRECSD 10
LP L+R+C+D
Sbjct: 1701 LPELVRQCAD 1710
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 LPILIRECSD 10
LP LIR+C D
Sbjct: 1699 LPELIRQCID 1708
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 LPILIRECSD 10
LP LIR+C D
Sbjct: 1699 LPELIRQCID 1708
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LPILIRECSD 10
LP LIR+C D
Sbjct: 1699 LPELIRQCID 1708
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 LPILIRECSD 10
LP LIR+C D
Sbjct: 1699 LPELIRQCID 1708
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 LPILIRECSD 10
LP LIR+C D
Sbjct: 1699 LPELIRQCID 1708
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 LPILIRECSD 10
LP LIR+C D
Sbjct: 1699 LPELIRQCID 1708
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 LPILIRECSD 10
LP L+R+C++
Sbjct: 1701 LPELVRQCAN 1710
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 65 PLILRDCS 72
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 65 PLILRDCS 72
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 65 PLILRDCS 72
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 65 PLILRDCS 72
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 65 PLILRDCS 72
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 65 PLILRDCS 72
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 65 PLILRDCS 72
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 61 PLILRDCS 68
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 57 PLILRDCS 64
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 65 PLILRDCS 72
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 65 PLILRDCS 72
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 65 PLILRDCS 72
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 65 PLILRDCS 72
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 63 PLILRDCS 70
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 54 PLILRDCS 61
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 54 PLILRDCS 61
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 54 PLILRDCS 61
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 54 PLILRDCS 61
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 PILIRECS 9
P+++R+CS
Sbjct: 65 PLILRDCS 72
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 PILIRECS 9
P++IR CS
Sbjct: 1019 PLIIRGCS 1026
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 PILIRECS 9
P++IR CS
Sbjct: 1018 PLIIRGCS 1025
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 PILIRECS 9
P++IR CS
Sbjct: 1018 PLIIRGCS 1025
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PILIREC 8
PI+I++C
Sbjct: 302 PIIIKDC 308
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 2 PILIRECSD 10
P+L R C D
Sbjct: 400 PLLARVCED 408
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 LPILIREC 8
+PI REC
Sbjct: 507 VPIYFREC 514
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 2 PILIREC 8
PI+I++C
Sbjct: 302 PIIIKDC 308
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 2 PILIREC 8
PI+I++C
Sbjct: 302 PIIIKDC 308
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LPILIRECSD 10
+P++ EC D
Sbjct: 697 MPVVPEECYD 706
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 4 LIREC 8
LIREC
Sbjct: 327 LIREC 331
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PILIRECS 9
PI+I++C+
Sbjct: 479 PIVIQDCA 486
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PILIRECS 9
PI+I++C+
Sbjct: 481 PIVIQDCA 488
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 2 PILIRECS 9
PI++++C+
Sbjct: 295 PIILKDCT 302
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LPILIRECSD 10
+P++ EC D
Sbjct: 696 MPVVPEECYD 705
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PILIRECS 9
PI+I++C+
Sbjct: 475 PIVIQDCA 482
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 4 LIRECSD 10
L+R C+D
Sbjct: 55 LVRTCND 61
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 4 LIRECSD 10
L+R C+D
Sbjct: 72 LVRTCND 78
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 4 LIRECSD 10
L+R C+D
Sbjct: 90 LVRTCND 96
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 4 LIRECSD 10
L+R C+D
Sbjct: 90 LVRTCND 96
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 1 LPILIREC 8
+PI REC
Sbjct: 523 VPIKYREC 530
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 LPILIREC 8
L +LIR C
Sbjct: 3082 LAVLIRAC 3089
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 LPILIREC 8
L +LIR C
Sbjct: 3124 LAVLIRAC 3131
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 LPILIR 6
LP+LIR
Sbjct: 521 LPVLIR 526
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 LPILIR 6
LP+LIR
Sbjct: 521 LPVLIR 526
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 LPILIR 6
LP+LIR
Sbjct: 521 LPVLIR 526
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PILIRECS 9
P+++ +CS
Sbjct: 581 PVIMNKCS 588
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PILIRECS 9
P+++ +CS
Sbjct: 581 PVIMNKCS 588
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PILIRECS 9
P+++ +CS
Sbjct: 581 PVIMNKCS 588
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 1 LPILIREC 8
+PI REC
Sbjct: 523 VPIKYREC 530
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 LPILIREC 8
L IL+ EC
Sbjct: 448 LQILVEEC 455
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LPILIREC 8
L IL+ EC
Sbjct: 448 LQILVEEC 455
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 4 LIRECSD 10
L+R C+D
Sbjct: 90 LVRTCND 96
12|Sequence|56|65|RECSDVQPKL
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 CSDVQPKL 10
C+++ PKL
Sbjct: 1889 CTEIDPKL 1896
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 CSDVQPKL 10
C+++ PKL
Sbjct: 1889 CTEIDPKL 1896
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 RECSDVQ 7
+ECSD Q
Sbjct: 751 KECSDTQ 757
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 2 ECSDVQPKL 10
ECSDV+ L
Sbjct: 22 ECSDVENDL 30
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 2 ECSDVQPKL 10
ECSDV+ L
Sbjct: 22 ECSDVENDL 30
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 RECSDVQP 8
R CS V+P
Sbjct: 254 RRCSGVEP 261
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 2 ECSDVQPKL 10
ECSD++ L
Sbjct: 22 ECSDIENDL 30
>sp|RP19_MONPV|DNA-DIRECTED RNA polymerase 19 kDa|Monkeypox virus (MPXV)
Query: 2 ECSDVQPK 9
E SD+ PK
Sbjct: 29 ETSDIDPK 36
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 2 ECSDVQ 7
EC D+Q
Sbjct: 195 ECGDIQ 200
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 2 ECSDVQ 7
EC D+Q
Sbjct: 195 ECGDIQ 200
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ECSDVQ 7
EC D+Q
Sbjct: 195 ECGDIQ 200
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RECSDVQ 7
+ C+DVQ
Sbjct: 297 KRCTDVQ 303
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 ECSDVQPK 9
+C D PK
Sbjct: 134 QCEDFSPK 141
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 ECSDVQPK 9
+C D PK
Sbjct: 134 QCEDFSPK 141
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 ECSDVQPK 9
+C D PK
Sbjct: 134 QCEDFSPK 141
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 ECSDVQPK 9
+C D PK
Sbjct: 134 QCEDFSPK 141
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 ECSDVQPKL 10
ECSDV L
Sbjct: 22 ECSDVDNDL 30
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 2 ECSDV 6
ECSDV
Sbjct: 22 ECSDV 26
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CSDVQPK 9
C ++QP+
Sbjct: 409 CDEIQPE 415
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 3 CSDVQPK 9
C ++QP+
Sbjct: 409 CDEIQPE 415
>sp|CEP1_HHV2H|CYTOPLASMIC envelopment protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 RECSDVQPKL 10
R+ SD QP+
Sbjct: 46 RQVSDRQPRF 55
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 2 ECSDVQPKL 10
+CSDV+ L
Sbjct: 24 DCSDVENDL 32
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 2 ECSDVQPKL 10
+CSDV+ L
Sbjct: 24 DCSDVENDL 32
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 2 ECSDVQPKL 10
ECSD+ L
Sbjct: 22 ECSDIDNDL 30
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 ECSDVQ 7
ECSD++
Sbjct: 22 ECSDLE 27
13|Sequence|61|70|VQPKLWARYA
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PKLWARYA 10
P L ARYA
Sbjct: 414 PNLLARYA 421
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PKLWARYA 10
P L ARYA
Sbjct: 414 PNLLARYA 421
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PKLWARYA 10
P L ARYA
Sbjct: 414 PNLLARYA 421
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 5 LWARYA 10
+W RYA
Sbjct: 964 MWMRYA 969
>sp|PG072_VARV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus
Query: 1 VQPKLWARYA 10
+ PK W R A
Sbjct: 1 MNPKHWGRAA 10
>sp|PG072_VAR67|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus (isolate
Query: 1 VQPKLWARYA 10
+ PK W R A
Sbjct: 1 MNPKHWGRAA 10
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 PKLWAR 8
P+LW R
Sbjct: 263 PRLWTR 268
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 PKLWAR 8
P+LW R
Sbjct: 263 PRLWTR 268
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 PKLWAR 8
P+LW R
Sbjct: 263 PRLWTR 268
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 PKLWAR 8
P+LW R
Sbjct: 263 PRLWTR 268
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 PKLWAR 8
P+LW R
Sbjct: 263 PRLWTR 268
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 PKLWAR 8
P+LW R
Sbjct: 263 PRLWTR 268
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 PKLWAR 8
P+LW R
Sbjct: 263 PRLWTR 268
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 PKLWAR 8
P+LW R
Sbjct: 263 PRLWTR 268
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 PKLWAR 8
P+LW R
Sbjct: 263 PRLWTR 268
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 VQPKLWA 7
V P++WA
Sbjct: 2555 VPPRMWA 2561
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 VQPKLWA 7
V P++WA
Sbjct: 2568 VPPRMWA 2574
14|Sequence|66|75|WARYAFGQET
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 1 WARYAFG 7
W R++FG
Sbjct: 336 WPRFSFG 342
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 1 WARYAFG 7
W R++FG
Sbjct: 336 WPRFSFG 342
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas)
Query: 2 ARYAFG 7
ARY FG
Sbjct: 3 ARYGFG 8
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 5 AFGQET 10
AFGQE+
Sbjct: 871 AFGQES 876
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 WARYAFG 7
W R FG
Sbjct: 132 WGRITFG 138
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 WARYAFG 7
W R FG
Sbjct: 132 WGRITFG 138
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 WARYAFG 7
W R FG
Sbjct: 132 WGRITFG 138
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 WARYAFG 7
W R FG
Sbjct: 132 WGRITFG 138
>sp|SCP_HHV11|SMALL capsomere-interacting protein|Human herpesvirus 1 (strain 17)
Query: 1 WARYAFG 7
W R AFG
Sbjct: 87 WLRPAFG 93
15|Sequence|71|80|FGQETNVPLN
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 GQETNVPLN 10
GQETNV ++
Sbjct: 386 GQETNVSMS 394
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 GQETNVPLN 10
GQETNV ++
Sbjct: 386 GQETNVSMS 394
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 GQETNVPLN 10
GQETNV ++
Sbjct: 386 GQETNVSMS 394
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 1 FGQETNVPLN 10
FG +T VP++
Sbjct: 1120 FGPDTPVPMS 1129
>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 GQETNVPLN 10
GQETNV ++
Sbjct: 386 GQETNVSMS 394
>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 GQETNVPLN 10
GQETNV ++
Sbjct: 386 GQETNVSMS 394
>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 GQETNVPLN 10
GQETNV ++
Sbjct: 386 GQETNVSMS 394
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 FGQETNVP 8
FG TN+P
Sbjct: 202 FGSYTNLP 209
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 FGQETNVPLN 10
FG +T VP++
Sbjct: 1148 FGPDTLVPMS 1157
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 FGQETNVP 8
FG TN+P
Sbjct: 171 FGSYTNLP 178
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 GQETNVPLN 10
+ET +P+N
Sbjct: 2436 AEETKLPIN 2444
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GQETNVPLN 10
+ET +P+N
Sbjct: 2435 AEETKLPIN 2443
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 3 QETNVPL 9
Q+T+VPL
Sbjct: 421 QKTSVPL 427
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 FGQETNVPLN 10
+GQ TN+ LN
Sbjct: 756 YGQITNMLLN 765
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 FGQETNVPLN 10
+GQ TN+ LN
Sbjct: 760 YGQITNMLLN 769
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 FGQETNVPLN 10
+GQ TN+ LN
Sbjct: 754 YGQITNMLLN 763
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 FGQETNVPLN 10
+GQ TN+ LN
Sbjct: 754 YGQITNMLLN 763
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 FGQETNVPLN 10
+GQ TN+ LN
Sbjct: 754 YGQITNMLLN 763
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 FGQETNVPLN 10
+GQ TN+ LN
Sbjct: 754 YGQITNMLLN 763
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 FGQETNVPLN 10
+GQ TN+ LN
Sbjct: 754 YGQITNMLLN 763
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 FGQETNVP 8
FG TN+P
Sbjct: 201 FGAFTNLP 208
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 FGQETNVP 8
FG TN+P
Sbjct: 201 FGAFTNLP 208
16|Sequence|76|85|NVPLNNFSAD
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 NVPLNNFSA 9
N+P NF+A
Sbjct: 974 NIPQGNFTA 982
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 NVPLNNFSA 9
N+P NF+A
Sbjct: 973 NIPKGNFTA 981
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 NVPLNNFSA 9
NVP +FSA
Sbjct: 971 NVPRGDFSA 979
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 NVPLNNFSA 9
NVP +FSA
Sbjct: 971 NVPRGDFSA 979
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 VPLNNFSA 9
+PLNNF +
Sbjct: 110 LPLNNFKS 117
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 NVPLNNFSA 9
NVP NF A
Sbjct: 980 NVPKGNFQA 988
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 VPLNNFSAD 10
VP+NN A+
Sbjct: 383 VPINNLQAN 391
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 VPLNNFSAD 10
VP+NN A+
Sbjct: 383 VPINNLKAN 391
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 NVPLNNFSA 9
N+P +FSA
Sbjct: 970 NIPKGDFSA 978
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 NVPLNNFSA 9
N+P NF A
Sbjct: 980 NIPKGNFQA 988
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 VPLNNFSA 9
VP+NN S+
Sbjct: 384 VPVNNMSS 391
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 3 PLNNFSA 9
PL NFS+
Sbjct: 109 PLKNFSS 115
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 1 NVPLNNFSAD 10
N+P+ N+S D
Sbjct: 53 NLPIRNWSFD 62
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 4 LNNFSAD 10
L NFSAD
Sbjct: 496 LENFSAD 502
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 VPLNN 6
VPLNN
Sbjct: 386 VPLNN 390
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 2 VPLNNFS 8
VP+NN S
Sbjct: 384 VPVNNLS 390
17|Sequence|81|90|NFSADQVTRA
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 NFSADQV 7
NF AD+V
Sbjct: 1919 NFKADRV 1925
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 NFSADQV 7
NF AD+V
Sbjct: 1919 NFKADRV 1925
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 NFSADQV 7
NF AD+V
Sbjct: 1915 NFKADRV 1921
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 NFSADQV 7
NF AD+V
Sbjct: 1909 NFKADRV 1915
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 NFSADQV 7
NF AD+V
Sbjct: 1890 NFKADRV 1896
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 NFSADQV 7
NF AD+V
Sbjct: 1890 NFKADRV 1896
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 NFSADQV 7
NF AD+V
Sbjct: 1890 NFKADRV 1896
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 NFSADQV 7
NF AD+V
Sbjct: 1890 NFKADRV 1896
18|Sequence|86|99|QVTRALENVLSGKA
>sp|M1_I56A3|MATRIX protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 QVTRALENVLSGK 13
++ + LENV +GK
Sbjct: 23 EIAQRLENVFAGK 35
>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)
Query: 2 VTRALENVLSG 12
VTR + N+L G
Sbjct: 164 VTRVISNILLG 174
>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 VTRALENVLSG 12
VTR + N+L G
Sbjct: 164 VTRVISNILLG 174
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 5 ALENVLSG 12
AL+N LSG
Sbjct: 1499 ALDNALSG 1506
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 ALENVLSG 12
AL+N LSG
Sbjct: 1499 ALDNALSG 1506