NAA60_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|LASSPVVETM

>sp|MCH_METM5|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 1 LASSPVVETM 10
LAS P+VE M
Sbjct: 6 LASLPIVEDM 15


>sp|MCH_METM7|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 1 LASSPVVETM 10
LAS P+VE M
Sbjct: 6 LASLPIVEDM 15


>sp|MCH_METMP|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LASSPVVETM 10
LAS P+VE M
Sbjct: 6 LASLPIVEEM 15




2|SequenceR|15|6|LSVESLASSP

>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 2 SVESLASSP 10
SVE LAS P
Sbjct: 551 SVEELASIP 559




3|SequenceR|20|11|HCLLRLSVES

***** No hits found ******


4|SequenceR|25|16|TDIDDHCLLR

>sp|IF6_METKA|TRANSLATION initiation factor 6|Methanopyrus kandleri (strain AV19 /

Query: 2 DIDDHCL 8
D+DDH L
Sbjct: 116 DLDDHAL 122


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DHCLL 9
DHCLL
Sbjct: 938 DHCLL 942


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DIDDHCLLR 10
DI+DH LR
Sbjct: 195 DIEDHDYLR 203


>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 TDIDDHCLLR 10
TDIDD + R
Sbjct: 69 TDIDDKIIRR 78


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TDIDDHCLLR 10
TDIDD + R
Sbjct: 69 TDIDDKIIRR 78


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TDIDDHCLLR 10
TDIDD + R
Sbjct: 69 TDIDDKIIKR 78


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 TDIDDHCLLR 10
TDIDD + R
Sbjct: 69 TDIDDKIIKR 78


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TDIDDHCLLR 10
TDIDD + R
Sbjct: 70 TDIDDKIIKR 79


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TDIDDHCLLR 10
TDIDD + R
Sbjct: 68 TDIDDKIIKR 77


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 TDIDDHCLLR 10
TDIDD + R
Sbjct: 69 TDIDDKIIKR 78


>sp|SYC_METMP|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TDIDDHCLLR 10
TDIDD + R
Sbjct: 68 TDIDDKIIKR 77


>sp|SYC_METM7|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 TDIDDHCLLR 10
TDIDD + R
Sbjct: 68 TDIDDKIIKR 77


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 TDIDDHCLLR 10
TDIDD + R
Sbjct: 68 TDIDDKIIKR 77


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DIDDHCLLR 10
+ID +C LR
Sbjct: 691 EIDSYCSLR 699




5|SequenceR|30|21|CLHKVTDIDD

>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LHKVTDIDD 10
L +TDIDD
Sbjct: 63 LQNITDIDD 71


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LHKVTDIDD 10
L +TDIDD
Sbjct: 63 LQNITDIDD 71


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 LHKVTDIDD 10
+ +TDIDD
Sbjct: 64 VQNITDIDD 72


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LHKVTDIDD 10
+ +TDIDD
Sbjct: 65 VQNITDIDD 73


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LHKVTDIDD 10
+ +TDIDD
Sbjct: 66 VQNITDIDD 74


>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LHKVTDIDD 10
+ +TDIDD
Sbjct: 63 VQNITDIDD 71


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LHKVTDIDD 10
+ +TDIDD
Sbjct: 64 VQNITDIDD 72


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LHKVTDIDD 10
+ +TDIDD
Sbjct: 64 VQNITDIDD 72


>sp|RL32_METMA|LARGE ribosomal subunit protein eL32|Methanosarcina mazei (strain ATCC

Query: 1 CLHKVTDIDD 10
C HK +DD
Sbjct: 26 CSHKFKKLDD 35


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LHKVTDIDD 10
+ +TDIDD
Sbjct: 67 VQNITDIDD 75


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 5 VTDIDD 10
+TDIDD
Sbjct: 69 ITDIDD 74


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 VTDIDD 10
+TDIDD
Sbjct: 67 ITDIDD 72


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 VTDIDD 10
+TDIDD
Sbjct: 67 ITDIDD 72


>sp|SYC_METAC|CYSTEINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 VTDIDD 10
+TDIDD
Sbjct: 67 ITDIDD 72


>sp|RL32_METAC|LARGE ribosomal subunit protein eL32|Methanosarcina acetivorans (strain

Query: 1 CLHKVTDIDD 10
C HK +DD
Sbjct: 26 CSHKFKRLDD 35


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain

Query: 3 HKVTDIDD 10
H+VT IDD
Sbjct: 71 HEVTAIDD 78




6|SequenceR|35|26|PFWDGCLHKV

>sp|Y077_METJA|UNCHARACTERIZED protein MJ0077|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WDGCLHKV 10
W+GC +K+
Sbjct: 12 WEGCKNKI 19


>sp|RNP3_METMA|RIBONUCLEASE P protein component 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FWDGCLHKV 10
F+D C+H V
Sbjct: 6 FYDFCVHAV 14


>sp|RNP3_METBF|RIBONUCLEASE P protein component 3|Methanosarcina barkeri (strain Fusaro /

Query: 2 FWDGCLHKV 10
F+D C+H V
Sbjct: 6 FYDFCVHAV 14


>sp|RNP3_METAC|RIBONUCLEASE P protein component 3|Methanosarcina acetivorans (strain ATCC

Query: 2 FWDGCLHKV 10
F+D C+H V
Sbjct: 6 FYDFCVHAV 14


>sp|NADM_AERPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 WDGCLH 8
W+ CLH
Sbjct: 144 WEDCLH 149


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 FWDGC 6
FWD C
Sbjct: 465 FWDDC 469


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 1 PFWDGCLHK 9
P W G LH+
Sbjct: 283 PLWLGQLHE 291


>sp|Y1477_METJA|UNCHARACTERIZED protein MJ1477|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PFWDGC 6
P W+GC
Sbjct: 153 PEWEGC 158


>sp|SPEE_SACS2|POLYAMINE aminopropyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 FWDGCLHKV 10
F+DG HK+
Sbjct: 264 FYDGYSHKI 272


>sp|ISF1_METJA|IRON-SULFUR flavoprotein MJ0731|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DGCLHK 9
+GC+HK
Sbjct: 57 EGCIHK 62


>sp|MCAL_HALMA|L-MALYL-COA/BETA-METHYLMALYL-COA lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PFWDGCL 7
P WDG L
Sbjct: 192 PRWDGLL 198


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 2 FWDGC 6
WDGC
Sbjct: 355 LWDGC 359


>sp|IF2P_THEON|PROBABLE translation initiation factor IF-2|Thermococcus onnurineus (strain

Query: 3 WDGCLHK 9
+DG LHK
Sbjct: 255 YDGTLHK 261


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 3 WDGCLHK 9
+DG LHK
Sbjct: 702 YDGTLHK 708


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 3 WDGCLHK 9
+DG LHK
Sbjct: 650 YDGTLHK 656


>sp|HIS7_METS5|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PFWDGCLHKV 10
PF+D LH +
Sbjct: 35 PFFDHMLHSM 44


>sp|DFX_ARCFU|DESULFOFERRODOXIN homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DGCLHK 9
DGC+H+
Sbjct: 85 DGCVHR 90


>sp|HIS7_METKA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 PFWDGCLHK 9
PF+D LH+
Sbjct: 37 PFFDHLLHQ 45


>sp|RNP2_METTH|RIBONUCLEASE P protein component 2|Methanothermobacter thermautotrophicus

Query: 3 WDGCL 7
WD CL
Sbjct: 35 WDSCL 39




7|SequenceR|40|31|DPYEIPFWDG

>sp|REG5_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1055|Pyrococcus horikoshii

Query: 4 EIPFWDG 10
E+PFWD
Sbjct: 150 EVPFWDA 156


>sp|GUAAB_METB6|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoregula boonei

Query: 1 DPYEIPFWD 9
DP EIPF D
Sbjct: 264 DPLEIPFAD 272


>sp|G3P_METST|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DPYEIPFW 8
D YEIP W
Sbjct: 275 DMYEIPVW 282


>sp|G3P_METS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DPYEIPFW 8
D YEIP W
Sbjct: 276 DLYEIPVW 283


>sp|G3P_THEVO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DPYEIPFWDG 10
D YEI W+G
Sbjct: 273 DLYEIAIWEG 282


>sp|DIPPS_PYRFU|BIFUNCTIONAL IPC transferase and DIPP|Pyrococcus furiosus (strain ATCC 43587

Query: 4 EIPFWDG 10
EIP WDG
Sbjct: 157 EIPSWDG 163


>sp|G3P_METTH|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DPYEIPFWD 9
D +EIP W+
Sbjct: 275 DLFEIPVWE 283


>sp|AROA_SULTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DPYEIPFWDG 10
D YE+P +DG
Sbjct: 242 DVYELPNFDG 251


>sp|Y1613_METJA|UNCHARACTERIZED protein MJ1613|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 IPFWD 9
+PFWD
Sbjct: 62 VPFWD 66


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 1 DPYEIP 6
DPY+IP
Sbjct: 507 DPYKIP 512


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DPYEIPFWD 9
D +EIP W+
Sbjct: 277 DLWEIPVWE 285


>sp|G3P_METFE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermus fervidus

Query: 1 DPYEIPFW 8
D +EIP W
Sbjct: 274 DLFEIPVW 281


>sp|UPPP_METMP|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain DSM 14266

Query: 5 IPFWDG 10
IP+WD
Sbjct: 135 IPYWDA 140


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YEIPFWDG 10
Y PFW G
Sbjct: 392 YYFPFWSG 399


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 PYEIPFW 8
PY++P W
Sbjct: 345 PYKVPDW 351


>sp|GUAAB_METPE|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosphaerula

Query: 1 DPYEIPF 7
DP E+P+
Sbjct: 264 DPLEVPY 270


>sp|Y1455_PYRHO|UPF0091 protein PH1455|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 IPFWDG 10
IP W+G
Sbjct: 98 IPLWEG 103


>sp|Y1342_METJA|UNCHARACTERIZED protein MJ1342|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YEIPFWDG 10
Y+I WDG
Sbjct: 91 YKINLWDG 98


>sp|NRDR_HALLT|TRANSCRIPTIONAL repressor NrdR|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 YEIPFWD 9
YE P WD
Sbjct: 41 YERPEWD 47


>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DPYEIP 6
DPY++P
Sbjct: 85 DPYQLP 90


>sp|IF5A_THEVO|TRANSLATION initiation factor 5A|Thermoplasma volcanium (strain ATCC 51530

Query: 4 EIPFWDG 10
E+P+W+
Sbjct: 113 EVPYWEA 119


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DPYEIPFWD 9
+ Y+IP WD
Sbjct: 181 EKYKIPSWD 189


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 4 EIPFWDG 10
EIP WD
Sbjct: 697 EIPGWDA 703


>sp|IF5A_PICTO|TRANSLATION initiation factor 5A|Picrophilus torridus (strain ATCC 700027

Query: 4 EIPFWDG 10
E+P+W+
Sbjct: 113 EVPYWEA 119


>sp|IF5A_THEAC|TRANSLATION initiation factor 5A|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 EIPFWD 9
E+P+W+
Sbjct: 113 EVPYWE 118


>sp|CFBE_METJA|COENZYME F(430) synthetase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 YEIPFWD 9
YE+ WD
Sbjct: 26 YEVDVWD 32


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DPYEIPFWDG 10
+ +E+P W G
Sbjct: 195 NTFELPHWKG 204


>sp|EF1B_DESA1|ELONGATION factor 1-beta|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 YEIPFWD 9
YE+ WD
Sbjct: 34 YELKMWD 40


>sp|SEPS_METAC|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DPYEIPFWDG 10
P E P W+G
Sbjct: 400 SPCEFPAWEG 409


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DPYEIPFWDG 10
P E P W+G
Sbjct: 400 SPCEFPSWEG 409


>sp|PURP_IGNH4|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PYEIPFWD 9
PY +WD
Sbjct: 313 PYSYLYWD 320


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DPYEIPFWDG 10
P E P W+G
Sbjct: 400 SPCEFPAWEG 409


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PYEIPFW 8
PYE P W
Sbjct: 358 PYERPKW 364


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 1 DPYEIPF 7
DP+E+P
Sbjct: 96 DPFELPL 102


>sp|Y3504_METJA|UNCHARACTERIZED protein MJECL04|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DPYEIPFWD 9
+ ++PFWD
Sbjct: 191 EKVKLPFWD 199


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 1 DPYEIPF 7
DP+E+P
Sbjct: 96 DPFELPL 102


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 6 PFWDG 10
PFW+G
Sbjct: 170 PFWNG 174




8|SequenceR|45|36|DRYWSDPYEI

>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 DRYWSDPY 8
DR W PY
Sbjct: 736 DRLWKKPY 743


>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 5 SDPYEI 10
SDPYEI
Sbjct: 27 SDPYEI 32


>sp|RL19E_METVA|LARGE ribosomal subunit protein eL19|Methanococcus vannielii

Query: 1 DRYWSDP 7
DR W DP
Sbjct: 19 DRVWVDP 25


>sp|WECB_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DRYWSDPY 8
+R+W++P+
Sbjct: 340 NRHWNNPF 347


>sp|DTDA_METPE|D-AMINOACYL-TRNA deacylase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DRYWSDP 7
D WSDP
Sbjct: 146 DHEWSDP 152


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 WSDPYEI 10
+SDPYE+
Sbjct: 470 YSDPYEL 476


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DRYWSDP 7
+RYW DP
Sbjct: 276 ERYWKDP 282


>sp|AROE_IGNH4|SHIKIMATE dehydrogenase (NADP(+))|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 YWSDPYE 9
YW D YE
Sbjct: 249 YWRDVYE 255


>sp|THIM_METM6|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 DRYWSDPYE 9
D YW P E
Sbjct: 68 DEYWIPPME 76


>sp|PDXS_PYRCJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum calidifontis (strain

Query: 3 YWSDP 7
YW DP
Sbjct: 297 YWDDP 301


>sp|SDO1_PYRHO|RIBOSOME maturation protein SDO1 homolog|Pyrococcus horikoshii (strain

Query: 5 SDPYEI 10
SDPYE+
Sbjct: 71 SDPYEV 76


>sp|BAST_HALS3|TRANSDUCER protein BasT|Halobacterium salinarum (strain ATCC 29341

Query: 5 SDPYEI 10
SDPYE+
Sbjct: 160 SDPYEV 165


>sp|OTC_SULTO|ORNITHINE carbamoyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YWSDPYE 9
++ DPYE
Sbjct: 209 FYEDPYE 215


>sp|UPPP_METS3|UNDECAPRENYL-DIPHOSPHATASE smithii (strain ATCC 35061

Query: 3 YWSDPYE 9
++SDPY+
Sbjct: 85 FYSDPYK 91


>sp|SDO1_PYRAB|RIBOSOME maturation protein SDO1 homolog|Pyrococcus abyssi (strain GE5 /

Query: 5 SDPYEI 10
SDPYE+
Sbjct: 71 SDPYEV 76


>sp|RS12_METTP|SMALL ribosomal subunit protein uS12|Methanothrix thermoacetophila

Query: 4 WSDPY 8
WSDP+
Sbjct: 20 WSDPH 24


>sp|RS12_METHJ|SMALL ribosomal subunit protein uS12|Methanospirillum hungatei JF-1

Query: 4 WSDPY 8
WSDP+
Sbjct: 20 WSDPH 24


>sp|PDXS_DESA1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Desulfurococcus amylolyticus

Query: 3 YWSDP 7
YW DP
Sbjct: 296 YWDDP 300


>sp|OTC_SULAC|ORNITHINE carbamoyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YWSDPYE 9
++ DPYE
Sbjct: 209 FYEDPYE 215


>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 3 YWSDPY 8
YW PY
Sbjct: 271 YWKGPY 276


>sp|SDO1_THEKO|RIBOSOME maturation protein SDO1 homolog|Thermococcus kodakarensis (strain

Query: 5 SDPYEI 10
SDPYE+
Sbjct: 71 SDPYEV 76


>sp|PDXS_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Hyperthermus butylicus (strain

Query: 3 YWSDP 7
YW DP
Sbjct: 296 YWDDP 300


>sp|RL19E_METJA|LARGE ribosomal subunit protein eL19|Methanocaldococcus jannaschii

Query: 1 DRYWSDPYEI 10
+R W DP ++
Sbjct: 22 ERVWIDPTQL 31


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DRYWSDP 7
+RYW+ P
Sbjct: 219 ERYWNTP 225


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DRYWSDPYE 9
+RY++ PYE
Sbjct: 45 NRYFTLPYE 53


>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus (strain

Query: 2 RYWSDPYEI 10
R WS+P I
Sbjct: 195 RMWSEPRRI 203


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 5 SDPYEI 10
SDPY+I
Sbjct: 543 SDPYDI 548


>sp|RL15E_AERPE|LARGE ribosomal subunit protein eL15|Aeropyrum pernix (strain ATCC

Query: 2 RYWSDPYE 9
R W PYE
Sbjct: 11 REWKKPYE 18


>sp|SYFA_PYRHO|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RYWSDPYEI 10
R W+D Y++
Sbjct: 284 REWTDTYQL 292


>sp|GYAR_AERPE|GLYOXYLATE reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DRYWSDPYE 9
D+Y PYE
Sbjct: 30 DKYQPPPYE 38


>sp|SURE_METVS|5'-NUCLEOTIDASE SurE|Methanococcus vannielii (strain ATCC 35089

Query: 3 YWSDPYEI 10
YW D Y I
Sbjct: 214 YWIDGYPI 221


>sp|SURE_METM5|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C5 /

Query: 3 YWSDPYEI 10
YW D Y I
Sbjct: 214 YWLDGYPI 221


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 2 RYWSDPYEI 10
R W+D Y++
Sbjct: 284 REWTDTYQL 292


>sp|SYFA_PYRAB|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 RYWSDPYEI 10
R W+D Y++
Sbjct: 285 REWTDTYQL 293


>sp|SURE_METM6|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C6 /

Query: 3 YWSDPYEI 10
YW D Y I
Sbjct: 214 YWLDGYPI 221


>sp|Y544_THEVO|UNCHARACTERIZED solute-binding protein TV0544|Thermoplasma volcanium (strain ATCC

Query: 4 WSDPY 8
WSDP+
Sbjct: 181 WSDPF 185


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RYWSDPYEI 10
R W+D Y++
Sbjct: 285 REWTDTYQL 293


>sp|SYFA_PYRFU|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RYWSDPYEI 10
R W+D Y++
Sbjct: 284 REWTDTYQL 292


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DRYWSDP 7
++YW DP
Sbjct: 278 EKYWRDP 284


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 2 RYWSDPYEI 10
R W+D Y++
Sbjct: 285 REWTDTYQL 293


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 RYWSDP 7
R+W DP
Sbjct: 354 RFWEDP 359


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DRYWSD 6
DRYW D
Sbjct: 381 DRYWLD 386


>sp|SURE_METJA|5'-NUCLEOTIDASE SurE|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YWSDPYEI 10
YW D Y I
Sbjct: 213 YWIDGYPI 220




9|SequenceR|50|41|KNSTIDRYWS

>sp|RS8_PICTO|SMALL ribosomal subunit protein uS8|Picrophilus torridus (strain ATCC

Query: 1 KNSTIDRYWS 10
KNS I+RY S
Sbjct: 81 KNSNIERYES 90


>sp|AROB_THEKO|3-DEHYDROQUINATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 NSTIDRYW 9
N+T++R W
Sbjct: 29 NTTVERLW 36


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NSTIDRYWS 10
N I+RYW+
Sbjct: 215 NYHIERYWN 223


>sp|DCDB_METLZ|DCTP deaminase, dUMP-forming|Methanocorpusculum labreanum (strain ATCC

Query: 1 KNSTIDRY 8
KN+TI RY
Sbjct: 171 KNATISRY 178


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 IDRYW 9
+DRYW
Sbjct: 380 VDRYW 384


>sp|RTCA_SULTO|RNA 3'-terminal phosphate cyclase|Sulfurisphaera tokodaii (strain DSM

Query: 2 NSTIDRYWS 10
N+T+DR+ S
Sbjct: 277 NATVDRHMS 285


>sp|THIM_METM7|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain C7 /

Query: 4 TIDRYW 9
T+D YW
Sbjct: 66 TLDEYW 71


>sp|THIM_METM6|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain C6 /

Query: 4 TIDRYW 9
T+D YW
Sbjct: 66 TLDEYW 71


>sp|THIM_METM5|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain C5 /

Query: 4 TIDRYW 9
T+D YW
Sbjct: 66 TLDEYW 71


>sp|THIM_CALMQ|HYDROXYETHYLTHIAZOLE kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 TIDRYW 9
T+D YW
Sbjct: 69 TLDEYW 74


>sp|THIM_METMP|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 4 TIDRYW 9
T+D YW
Sbjct: 66 TLDEYW 71


>sp|THIM_METVS|HYDROXYETHYLTHIAZOLE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 4 TIDRYW 9
T+D YW
Sbjct: 66 TLDEYW 71


>sp|Y1039_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 1 KNSTIDRYWS 10
K +ID YW+
Sbjct: 353 KKVSIDDYWA 362


>sp|HJC_SULAC|CROSSOVER junction endodeoxyribonuclease Hjc|Sulfolobus acidocaldarius

Query: 1 KNSTIDRY 8
K ST++RY
Sbjct: 6 KGSTLERY 13




10|SequenceR|55|46|LSFFKKNSTI

>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 LSFFKKNSTI 10
L FF +NS+I
Sbjct: 263 LGFFSENSSI 272


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 LSFFKKN 7
LSFF+KN
Sbjct: 67 LSFFEKN 73


>sp|PORA_PYRFU|PYRUVATE synthase subunit PorA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LSFFKKNSTI 10
L+F +KN TI
Sbjct: 316 LAFLEKNITI 325


>sp|TRUB_SACS2|PROBABLE tRNA pseudouridine synthase B|Saccharolobus solfataricus (strain

Query: 4 FKKNSTI 10
FKKN T+
Sbjct: 193 FKKNDTV 199




11|SequenceR|60|51|RYTAALSFFK

>sp|ARLY_METJA|ARGININOSUCCINATE lyase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RYTAALSFFK 10
+YT +LSF K
Sbjct: 19 KYTTSLSFDK 28




12|SequenceR|65|56|GVIAGRYTAA

>sp|RL22_CENSY|LARGE ribosomal subunit protein uL22|Cenarchaeum symbiosum (strain A)

Query: 1 GVIAGRY 7
GV+AGRY
Sbjct: 76 GVMAGRY 82


>sp|IF6_STAMF|TRANSLATION initiation factor 6|Staphylothermus marinus (strain ATCC 43588

Query: 1 GVIAGRYTAA 10
G+I G YT
Sbjct: 203 GIIVGEYTTG 212


>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 1 GVIAGRYTA 9
G+I+G+Y A
Sbjct: 300 GMISGKYAA 308


>sp|Y544_THEVO|UNCHARACTERIZED solute-binding protein TV0544|Thermoplasma volcanium (strain ATCC

Query: 1 GVIAGRYTA 9
G AGR+TA
Sbjct: 27 GFAAGRFTA 35


>sp|BIOY_METTH|PROBABLE biotin transporter BioY|Methanothermobacter thermautotrophicus

Query: 1 GVIAGRY 7
GVI GRY
Sbjct: 3 GVILGRY 9


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 1 GVIAGRYTA 9
G+I RYTA
Sbjct: 28 GLIRARYTA 36


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VIAGRYTA 9
VIAG YT
Sbjct: 188 VIAGNYTG 195




13|SequenceR|70|61|EAVIMGVIAG

>sp|UPPP_METBU|UNDECAPRENYL-DIPHOSPHATASE burtonii (strain DSM 6242

Query: 1 EAVIMGVIAG 10
EA+I+G++ G
Sbjct: 6 EAIILGIVQG 15


>sp|Y149_ARCFU|UNCHARACTERIZED protein AF_0149|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AVIMGVIAG 10
+V+MG+IAG
Sbjct: 66 SVVMGLIAG 74


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 2 AVIMGVIAG 10
AV+M VIAG
Sbjct: 215 AVLMDVIAG 223


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 2 AVIMGVIAG 10
AV+M VIAG
Sbjct: 214 AVLMDVIAG 222


>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 AVIMGVIA 9
+VIMGV+A
Sbjct: 93 SVIMGVVA 100


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VIMGVIAG 10
VIMG+I G
Sbjct: 434 VIMGIITG 441


>sp|NAH2_METJA|PROBABLE Na(+)/H(+) antiporter 2|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VIMGVIAG 10
+I+GVIAG
Sbjct: 194 IILGVIAG 201


>sp|Y1695_PYRFU|UNCHARACTERIZED lipoprotein PF1695|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VIMGVIAG 10
VIMG +AG
Sbjct: 14 VIMGFVAG 21


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 IMGVIAG 10
+MGV+AG
Sbjct: 220 VMGVVAG 226




14|SequenceR|75|66|TRNKIEAVIM

>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 3 NKIEAVIM 10
NKIE +IM
Sbjct: 155 NKIELIIM 162




15|SequenceR|80|71|EKHIKTRNKI

>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EKHIKTRN 8
EKH++TRN
Sbjct: 796 EKHVETRN 803


>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKHIKTRNKI 10
+KH+K RN +
Sbjct: 634 DKHVKIRNNL 643


>sp|UPPS_THEVO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 1 EKHIKTRNKI 10
E H+K +NK+
Sbjct: 52 EGHVKGKNKV 61


>sp|PSA_METBF|PROTEASOME subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 1 EKHIKTRNK 9
EKH +T NK
Sbjct: 240 EKHKETENK 248


>sp|RS24_ARCFU|SMALL ribosomal subunit protein eS24|Archaeoglobus fulgidus (strain

Query: 1 EKHIKTRNKI 10
E+HI RNK+
Sbjct: 85 EEHIIERNKV 94


>sp|PSA_METTE|PROTEASOME subunit alpha|Methanosarcina thermophila

Query: 1 EKHIKTRNK 9
EKH +T NK
Sbjct: 238 EKHKETENK 246




16|SequenceR|85|76|LIDGDEKHIK

>sp|CBIX_SACI6|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 IDGDEKHIK 10
IDGDEK I+
Sbjct: 84 IDGDEKKIQ 92


>sp|CBIX_SACI4|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 IDGDEKHIK 10
IDGDEK I+
Sbjct: 84 IDGDEKKIQ 92


>sp|CBIX_SACI3|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.16.27)

Query: 2 IDGDEKHIK 10
IDGDEK I+
Sbjct: 84 IDGDEKKIQ 92


>sp|CBIX_SACI2|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 IDGDEKHIK 10
IDGDEK I+
Sbjct: 84 IDGDEKKIQ 92


>sp|CBIX_SACI1|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 IDGDEKHIK 10
IDGDEK I+
Sbjct: 84 IDGDEKKIQ 92


>sp|CBIX_SACI7|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 IDGDEKHIK 10
IDGDEK I+
Sbjct: 84 IDGDEKKIQ 92


>sp|RL18_HALWD|LARGE ribosomal subunit protein uL18|Haloquadratum walsbyi (strain DSM

Query: 3 DGDEKHI 9
DGDE H+
Sbjct: 54 DGDETHV 60


>sp|SYH_METHJ|HISTIDINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LIDGDEKHIK 10
L DGD+K I+
Sbjct: 170 LADGDKKKIR 179


>sp|AROC_HALSA|CHORISMATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 DGDEKHI 9
DGDE H+
Sbjct: 272 DGDEDHV 278


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 1 LIDGDEKHI 9
LIDGDE +
Sbjct: 201 LIDGDESKV 209


>sp|Y514_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0514|Methanocaldococcus jannaschii

Query: 2 IDGDEKHI 9
IDGD+K+I
Sbjct: 18 IDGDKKYI 25


>sp|AROA_METHJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 LIDGDEK 7
L+DGD+K
Sbjct: 212 LVDGDDK 218


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 IDGDEKHI 9
I+G EKHI
Sbjct: 94 INGKEKHI 101


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IDGDEKHI 9
+DG E+HI
Sbjct: 618 VDGIEQHI 625


>sp|COOS2_METAC|CARBON monoxide dehydrogenase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 IDGDEKHI 9
+DG E+HI
Sbjct: 617 VDGIEQHI 624


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 DGDEKHI 9
DG EKH+
Sbjct: 478 DGSEKHV 484


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LIDGDEKHIK 10
L++GD H++
Sbjct: 150 LVEGDPMHVE 159


>sp|CAS2_THEKO|CRISPR-ASSOCIATED endoribonuclease Cas2|Thermococcus kodakarensis (strain ATCC

Query: 1 LIDGDEKHI 9
LIDGDE +
Sbjct: 52 LIDGDEDSV 60


>sp|MDH_PYRHO|MALATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LIDGDE 6
LIDGDE
Sbjct: 89 LIDGDE 94




17|SequenceR|90|81|SFNSALIDGD

>sp|ARGJ_METM7|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 SFNSALIDGD 10
SFN+A++DGD
Sbjct: 216 SFNNAVVDGD 225


>sp|ARGJ_METVS|GLUTAMATE N-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SFNSALIDGD 10
SFN+A++DGD
Sbjct: 216 SFNNAVVDGD 225


>sp|ARGJ_METM5|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 SFNSALIDGD 10
SFN+A++DGD
Sbjct: 216 SFNNAVVDGD 225


>sp|ARGJ_METMP|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SFNSALIDGD 10
SFN+A++DGD
Sbjct: 216 SFNNAVVDGD 225


>sp|ARGJ_METM6|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 SFNSALIDGD 10
SFN+A++DGD
Sbjct: 216 SFNNAVVDGD 225


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 SFNSALIDGD 10
SF+S +IDG+
Sbjct: 291 SFDSCIIDGE 300


>sp|WECB_METJA|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FNSALIDGD 10
FNS +ID D
Sbjct: 192 FNSVVIDDD 200


>sp|ARGJ_METTH|GLUTAMATE N-acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 SFNSALIDGD 10
SFN ++DGD
Sbjct: 216 SFNMLIVDGD 225


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SFNSALIDGD 10
+FN ++DGD
Sbjct: 207 TFNMVVVDGD 216


>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SFNSALIDGD 10
+FN ++DGD
Sbjct: 207 TFNMVVVDGD 216


>sp|MDH_PYRHO|MALATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 ALIDGD 10
ALIDGD
Sbjct: 88 ALIDGD 93


>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 SFNSALIDGD 10
+FN +DGD
Sbjct: 200 TFNMITVDGD 209


>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 1 SFNSALIDGD 10
+FN +DGD
Sbjct: 198 TFNRLTVDGD 207


>sp|ARGJ_METJA|GLUTAMATE N-acetyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SFNSALIDGD 10
+FN+ +DGD
Sbjct: 212 TFNNISVDGD 221




18|SequenceR|95|86|VQTDVSFNSA

>sp|RSMA_METTH|PROBABLE ribosomal RNA small subunit|Methanothermobacter thermautotrophicus

Query: 1 VQTDVSFN 8
++TD+SFN
Sbjct: 229 IRTDLSFN 236




19|SequenceR|100|91|SLIYAVQTDV

***** No hits found ******


20|SequenceR|105|96|KVVGLSLIYA

>sp|FDHD_THEVO|SULFUR carrier protein FdhD|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KVVGLSLI 8
KVVG SLI
Sbjct: 199 KVVGFSLI 206




21|SequenceR|110|101|HKRFEKVVGL

>sp|Y1546_ARCFU|UNCHARACTERIZED MscS family protein AF_1546|Archaeoglobus fulgidus (strain ATCC

Query: 2 KRFEKVVGL 10
+RFE VVG+
Sbjct: 173 RRFEYVVGI 181


>sp|Y1455_METJA|UNCHARACTERIZED protein MJ1455|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HKRFEKVVGL 10
H RF +V+GL
Sbjct: 201 HFRFSQVIGL 210


>sp|PSB2_IGNH4|PROTEASOME subunit beta 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 HKRFEKVV 8
HKR EK+V
Sbjct: 41 HKRVEKIV 48


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 1 HKRFEKVV 8
KRFEK++
Sbjct: 468 QKRFEKII 475


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 HKRFEKVVGL 10
H EKVVG+
Sbjct: 334 HHLLEKVVGM 343


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KRFEKVVGL 10
K FEK +G+
Sbjct: 78 KEFEKYIGM 86


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 2 KRFEKVVGL 10
K FEK +G+
Sbjct: 78 KEFEKYIGM 86


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HKRFEK 6
HKRF+K
Sbjct: 185 HKRFDK 190


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HKRFEKVVGL 10
H+R EKVV L
Sbjct: 52 HERSEKVVKL 61


>sp|Y772_METJA|UNCHARACTERIZED protein MJ0772|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FEKVVG 9
FEKVVG
Sbjct: 117 FEKVVG 122


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HKRFEKVV 8
HK+ EKV+
Sbjct: 814 HKKAEKVI 821




22|SequenceR|115|106|LSGIGHKRFE

>sp|T1S1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 3 GIGHKRFE 10
GIGH RF+
Sbjct: 210 GIGHSRFK 217


>sp|AROA_METB6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 LSGIGHKRFE 10
++GIGH +F+
Sbjct: 328 ITGIGHLKFK 337


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 4 IGHKRFE 10
+GH+RFE
Sbjct: 67 MGHERFE 73


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LSGIGHKRFE 10
LS GH R+E
Sbjct: 213 LSDYGHMRYE 222


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 4 IGHKRFE 10
+GH+RFE
Sbjct: 67 LGHERFE 73


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 4 IGHKRFE 10
+GH+RFE
Sbjct: 67 LGHERFE 73


>sp|PSB_HALSA|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 1 LSGIGHKRFE 10
L+ +GHK F+
Sbjct: 231 LTTVGHKEFD 240


>sp|PSB_HALS3|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 29341

Query: 1 LSGIGHKRFE 10
L+ +GHK F+
Sbjct: 231 LTTVGHKEFD 240


>sp|EF1A_METLZ|ELONGATION factor 1-alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 IGHKRFE 10
I HK+FE
Sbjct: 75 IAHKKFE 81


>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 IGHKRFE 10
I HK+FE
Sbjct: 75 IAHKKFE 81


>sp|EF1A_METB6|ELONGATION factor 1-alpha|Methanoregula boonei (strain DSM 21154

Query: 4 IGHKRFE 10
I HKRF+
Sbjct: 75 IAHKRFD 81


>sp|LIPA_PYRCJ|LIPOYL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 GHKRF 9
GHKRF
Sbjct: 234 GHKRF 238


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 IGHKRFE 10
I HKRF+
Sbjct: 75 IAHKRFD 81


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 IGHKRFE 10
I HKRF+
Sbjct: 75 IAHKRFD 81


>sp|EF1A_METAC|ELONGATION factor 1-alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 IGHKRFE 10
I HKRF+
Sbjct: 75 IAHKRFD 81


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 4 IGHKRFE 10
I HKRF+
Sbjct: 74 ISHKRFD 80


>sp|EF1A_METBF|ELONGATION factor 1-alpha|Methanosarcina barkeri (strain Fusaro /

Query: 4 IGHKRFE 10
I HKRF+
Sbjct: 75 IAHKRFD 81


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 IGHKRFE 10
I HKRF+
Sbjct: 75 IAHKRFD 81


>sp|EF1A_METMA|ELONGATION factor 1-alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 IGHKRFE 10
I HKRF+
Sbjct: 75 IAHKRFD 81


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 LSGIGHKR 8
+SG+G KR
Sbjct: 662 ISGVGRKR 669


>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 3 GIGHKRF 9
GIGH R+
Sbjct: 67 GIGHSRW 73


>sp|Y449_METJA|UNCHARACTERIZED transporter MJ0449|Methanocaldococcus jannaschii (strain ATCC

Query: 5 GHKRFE 10
GH RFE
Sbjct: 69 GHSRFE 74


>sp|Y789_ARCFU|UNCHARACTERIZED protein AF_0789|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSGIGHKRF 9
L+G+G K F
Sbjct: 75 LAGVGEKEF 83


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 3 GIGHKRF 9
GIGH R+
Sbjct: 80 GIGHVRY 86


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 3 GIGHKRF 9
GIGH R+
Sbjct: 70 GIGHVRY 76


>sp|RL21_IGNH4|LARGE ribosomal subunit protein eL21|Ignicoccus hospitalis (strain

Query: 2 SGIGHKRF 9
SG+ H+RF
Sbjct: 52 SGLPHRRF 59


>sp|RL22_HALMA|LARGE ribosomal subunit protein uL22|Haloarcula marismortui (strain

Query: 2 SGIGHK 7
SG+GHK
Sbjct: 65 SGVGHK 70


>sp|RS13_HALMA|SMALL ribosomal subunit protein uS13|Haloarcula marismortui (strain

Query: 1 LSGIGHK 7
L+GIGH+
Sbjct: 44 LNGIGHR 50


>sp|ACYP_SULAC|ACYLPHOSPHATASE acidocaldarius (strain ATCC 33909

Query: 1 LSGIGHKRF 9
+ G+G++RF
Sbjct: 15 VQGVGYRRF 23


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 4 IGHKRFE 10
+GH+RF+
Sbjct: 67 LGHERFQ 73




23|SequenceR|120|111|LSELLLSGIG

>sp|G3P_PYRCJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LSELLLSGIG 10
LS LLL+GIG
Sbjct: 149 LSALLLNGIG 158


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 3 ELLLSGIG 10
E LLSG+G
Sbjct: 433 EYLLSGVG 440


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 ELLLSGIG 10
E LLSG+G
Sbjct: 435 EYLLSGVG 442


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 1 LSELLLSGI 9
LSE+L SGI
Sbjct: 235 LSEILKSGI 243


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 ELLLSGIG 10
++LLSG+G
Sbjct: 437 QILLSGVG 444


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 3 ELLLSGIG 10
++LLSG+G
Sbjct: 437 QILLSGVG 444


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 ELLLSGIG 10
++LLSG+G
Sbjct: 437 QILLSGVG 444


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 ELLLSGIG 10
++LLSG+G
Sbjct: 437 QILLSGVG 444


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 ELLLSGIG 10
++LLSG+G
Sbjct: 437 QILLSGVG 444


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 1 LSELLLSGI 9
LSE+L SGI
Sbjct: 235 LSEILKSGI 243


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 1 LSELLLSGI 9
LSE+L SGI
Sbjct: 235 LSEILKSGI 243


>sp|PELO_METVS|PROTEIN pelota homolog|Methanococcus vannielii (strain ATCC 35089

Query: 1 LSELLLSGI 9
LSE+L SGI
Sbjct: 235 LSEILKSGI 243


>sp|PELO_METM7|PROTEIN pelota homolog|Methanococcus maripaludis (strain C7 /

Query: 1 LSELLLSGI 9
LSE+L SGI
Sbjct: 235 LSEILKSGI 243


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LSELLLSGIG 10
LS+ LLSG G
Sbjct: 37 LSDNLLSGAG 46




24|SequenceR|125|116|SIHDKLSELL

>sp|CDC6A_HALMA|ORC1-TYPE DNA replication protein 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 SIHDKLSEL 9
+IHD+LS+L
Sbjct: 360 TIHDRLSQL 368


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 3 HDKLSELL 10
HD+L ELL
Sbjct: 401 HDELDELL 408


>sp|SPH3_HALVD|SMC-LIKE protein Sph3|Haloferax volcanii (strain ATCC 29605

Query: 1 SIHDKLSEL 9
S+HD+L EL
Sbjct: 461 SVHDELDEL 469


>sp|T2M2_METJA|TYPE II restriction enzyme MjaII|Methanocaldococcus jannaschii (strain

Query: 1 SIHDKLSELL 10
S+ DK+SE++
Sbjct: 103 SVRDKISEII 112


>sp|ARFB_METVM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus vulcanius (strain

Query: 1 SIHDKLSELL 10
IH+K+ E+L
Sbjct: 75 GIHNKVDEIL 84




25|SequenceR|130|121|DQATTSIHDK

>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 1 DQATTSIHDK 10
D+A++ +HDK
Sbjct: 114 DRASSYLHDK 123




26|SequenceR|135|126|IAKCHDQATT

>sp|RLME_METPE|RIBOSOMAL RNA large subunit methyltransferase|Methanosphaerula palustris

Query: 3 KCHDQA 8
KC+DQA
Sbjct: 117 KCYDQA 122


>sp|RRP4_THEAM|EXOSOME complex component Rrp4|Thermosphaera aggregans (strain DSM 11486

Query: 3 KCHDQ 7
KCHD+
Sbjct: 199 KCHDE 203




27|SequenceR|140|131|LVHLYIAKCH

>sp|TRM14_PYRFU|TRNA (guanine(6)-N2)-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 1 LVHLYIAK 8
+VHLY+ K
Sbjct: 358 MVHLYVVK 365


>sp|NAH3_METJA|PROBABLE Na(+)/H(+) antiporter 3|Methanocaldococcus jannaschii (strain ATCC

Query: 3 HLYIAKCH 10
H+++AKC+
Sbjct: 376 HIFVAKCN 383


>sp|AROB_PICTO|3-DEHYDROQUINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 LVHLYIAKC 9
++ YI+KC
Sbjct: 254 IIEAYISKC 262




28|SequenceR|145|136|TNNTTLVHLY

>sp|DAPF_METJA|DIAMINOPIMELATE epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TNNTTLVHL 9
TNN L HL
Sbjct: 254 TNNRVLAHL 262


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 TNNTTLVHLY 10
+ NT L H+Y
Sbjct: 167 SRNTELAHVY 176


>sp|URED_HALMA|UREASE accessory protein UreD|Haloarcula marismortui (strain ATCC 43049

Query: 2 NNTTLVHLY 10
+ TTLVH Y
Sbjct: 41 DGTTLVHDY 49


>sp|ENO_NATPD|ENOLASE pharaonis (strain ATCC 35678

Query: 1 TNNTTLVHL 9
T +TT+ HL
Sbjct: 358 TEDTTIAHL 366


>sp|ENO_HALSA|ENOLASE salinarum (strain ATCC 700922

Query: 1 TNNTTLVHL 9
T +TT+ HL
Sbjct: 358 TEDTTIAHL 366


>sp|ENO_HALS3|ENOLASE salinarum (strain ATCC 29341

Query: 1 TNNTTLVHL 9
T +TT+ HL
Sbjct: 358 TEDTTIAHL 366


>sp|ENO_HALMA|ENOLASE marismortui (strain ATCC 43049

Query: 1 TNNTTLVHL 9
T +TT+ HL
Sbjct: 360 TEDTTIAHL 368


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 1 TNNTTLVHL 9
T +TT+ HL
Sbjct: 359 TEDTTIAHL 367


>sp|ENO3_METHJ|ENOLASE 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TNNTTLVHL 9
T +TT+ HL
Sbjct: 358 TEDTTIAHL 366




29|SequenceR|150|141|YFNIATNNTT

>sp|AIPS_SACS2|ARCHAETIDYLINOSITOL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YFNIATNNTT 10
YF I +NTT
Sbjct: 45 YFEIMRSNTT 54


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YFNIATNNT 9
YFN++ N+T
Sbjct: 182 YFNVSLNDT 190




30|SequenceR|155|146|FDRNEYFNIA

>sp|Y1170_THEAC|PUTATIVE sulfur carrier protein Ta1170/Ta1414|Thermoplasma acidophilum

Query: 1 FDRNEYFNI 9
FDRN Y+ I
Sbjct: 64 FDRNGYYEI 72


>sp|RNZ_METJA|RIBONUCLEASE Z|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDRNEYFNI 9
+D+ EYFN+
Sbjct: 278 YDKEEYFNL 286


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 FDRNEYFNIA 10
F NEYF +A
Sbjct: 367 FKENEYFKLA 376


>sp|METK_THEAC|S-ADENOSYLMETHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DRNEYFNI 9
D +EYFNI
Sbjct: 220 DADEYFNI 227


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 FDRNEYFNI 9
FD N+YF I
Sbjct: 84 FDTNKYFII 92


>sp|RPOI_METJA|DNA-DIRECTED RNA polymerase subunit I|Methanocaldococcus jannaschii (strain

Query: 1 FDRNEYFNI 9
F +N+YFN+
Sbjct: 78 FKKNDYFNV 86


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 4 NEYFNI 9
NEY+NI
Sbjct: 138 NEYYNI 143


>sp|SUI1_HALSA|PROTEIN translation factor SUI1 homolog|Halobacterium salinarum (strain

Query: 1 FDRNEYFNIA 10
F RN+ FN+A
Sbjct: 88 FLRNKGFNVA 97


>sp|SUI1_HALS3|PROTEIN translation factor SUI1 homolog|Halobacterium salinarum (strain

Query: 1 FDRNEYFNIA 10
F RN+ FN+A
Sbjct: 88 FLRNKGFNVA 97


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain

Query: 1 FDRNEYF 7
FDR YF
Sbjct: 75 FDRKHYF 81


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 2 DRNEYFN 8
+ NEYFN
Sbjct: 9 EMNEYFN 15


>sp|METK_THEVO|S-ADENOSYLMETHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DRNEYFNI 9
D +EYFN+
Sbjct: 220 DADEYFNL 227


>sp|GATB_ARCFU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Archaeoglobus fulgidus (strain ATCC

Query: 1 FDRNEYF 7
FDR YF
Sbjct: 77 FDRKNYF 83


>sp|Y095_METJA|UNCHARACTERIZED protein MJ0095|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DRNEYFNIA 10
+R E+FNI+
Sbjct: 73 ERGEFFNIS 81


>sp|DHYS_SULAC|PROBABLE deoxyhypusine synthase|Sulfolobus acidocaldarius (strain ATCC

Query: 3 RNEYFNI 9
R EYFN+
Sbjct: 79 RREYFNV 85


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DRNEYFN 8
D N YFN
Sbjct: 788 DTNNYFN 794


>sp|PYRB_HALLT|ASPARTATE carbamoyltransferase catalytic subunit|Halorubrum lacusprofundi

Query: 2 DRNEYFNIA 10
D NEY +A
Sbjct: 232 DENEYHRVA 240


>sp|Y1530_METJA|UNCHARACTERIZED N-acetyltransferase MJ1530|Methanocaldococcus jannaschii (strain

Query: 4 NEYFNIA 10
N YFNIA
Sbjct: 90 NYYFNIA 96


>sp|MOAA_HALWD|PROBABLE GTP 3',8-cyclase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DRNEYF 7
DRN YF
Sbjct: 225 DRNRYF 230


>sp|RS4E_HALSA|SMALL ribosomal subunit protein eS4|Halobacterium salinarum (strain

Query: 2 DRNEYFNI 9
DR+EY+ +
Sbjct: 89 DRDEYYRV 96


>sp|RS4E_HALS3|SMALL ribosomal subunit protein eS4|Halobacterium salinarum (strain

Query: 2 DRNEYFNI 9
DR+EY+ +
Sbjct: 89 DRDEYYRV 96


>sp|UPPP_METM5|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C5 /

Query: 4 NEYFNIA 10
NEY N+A
Sbjct: 71 NEYINLA 77




31|SequenceR|160|151|YHHQKFDRNE

>sp|Y1237_ARCFU|UNCHARACTERIZED protein AF_1237|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YHHQKFDRNE 10
YH+Q F NE
Sbjct: 73 YHYQLFSENE 82


>sp|ATGT_HALSA|TRNA-GUANINE(15) transglycosylase|Halobacterium salinarum (strain ATCC 700922

Query: 2 HHQKFDR 8
HHQ+ DR
Sbjct: 383 HHQRLDR 389


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 HHQKFD 7
HH+KFD
Sbjct: 495 HHEKFD 500


>sp|EF1A_SULAC|ELONGATION factor 1-alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 HHQKFDRNE 10
HH K D+ E
Sbjct: 282 HHTKIDKAE 290


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HHQKFDRNE 10
HH K D+ E
Sbjct: 282 HHTKMDKAE 290


>sp|FLAK_METJA|PREFLAGELLIN peptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KFDRNE 10
KFD+NE
Sbjct: 191 KFDKNE 196


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 3 HQKFDRNE 10
HQ+FD +E
Sbjct: 77 HQEFDTDE 84


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YHHQKFDR 8
Y H K DR
Sbjct: 370 YRHPKLDR 377


>sp|MPTA_METLZ|GTP cyclohydrolase MptA|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 HHQKFDRNE 10
HH+ DR E
Sbjct: 97 HHEYADRTE 105




32|SequenceR|165|156|YYYPLYHHQK

>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 4 PLYHHQ 9
PL HHQ
Sbjct: 435 PLVHHQ 440


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 YYPLYHHQ 9
YY LY H+
Sbjct: 377 YYTLYRHK 384


>sp|AQPM_METTM|AQUAPORIN AqpM|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 YYPLY 6
YYP+Y
Sbjct: 221 YYPIY 225


>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 1 YYYPLYHH 8
YY P+Y +
Sbjct: 13 YYLPIYSY 20


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 YYYPLYH 7
+Y+ LYH
Sbjct: 478 FYHKLYH 484


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 YYYPLYH 7
+Y+ LYH
Sbjct: 478 FYHKLYH 484


>sp|Y195_METB6|PUTATIVE HTH-type transcriptional regulatory protein|Methanoregula boonei

Query: 6 YHHQK 10
YHH+K
Sbjct: 275 YHHEK 279


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YYPLYH 7
YY LYH
Sbjct: 744 YYVLYH 749


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 1 YYYPLYH 7
YY LYH
Sbjct: 474 YYQKLYH 480


>sp|LYSY_PYRAB|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 YYPLY 6
YYPLY
Sbjct: 324 YYPLY 328




33|SequenceR|170|161|VGRISYYYPL

>sp|Y923_METJA|UNCHARACTERIZED protein MJ0923|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGRISYYYP 9
VGR+++YYP
Sbjct: 125 VGRVAFYYP 133


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GRISYYY 8
GR+SYY+
Sbjct: 32 GRVSYYH 38


>sp|Y345_METJA|UNCHARACTERIZED protein MJ0345|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GRISYYYPL 10
G +SY YPL
Sbjct: 42 GSVSYDYPL 50


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 6 YYYPL 10
YYYPL
Sbjct: 597 YYYPL 601


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 6 YYYPL 10
YYYPL
Sbjct: 597 YYYPL 601


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 6 YYYPL 10
YYYPL
Sbjct: 597 YYYPL 601


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 6 YYYPL 10
YYYPL
Sbjct: 607 YYYPL 611


>sp|CHED_METHJ|PROBABLE chemoreceptor glutamine deamidase CheD|Methanospirillum hungatei

Query: 1 VGRISYYYP 9
+GR YYP
Sbjct: 140 IGRTVTYYP 148


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 VGRISYYYPL 10
VGR+ YY+ L
Sbjct: 250 VGRLIYYFIL 259


>sp|RFRNP_THEON|RNA-FREE ribonuclease P|Thermococcus onnurineus (strain NA1)

Query: 2 GRISYYYP 9
GR+ +Y P
Sbjct: 39 GRVEFYMP 46


>sp|FRHA_METVO|COENZYME F420 hydrogenase subunit alpha|Methanococcus voltae

Query: 2 GRISYY 7
GRI+YY
Sbjct: 347 GRITYY 352


>sp|MCH_METJA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GRISYYY 8
G I+YYY
Sbjct: 235 GGITYYY 241


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 GRISYYYPL 10
SY+YPL
Sbjct: 566 NEFSYWYPL 574




34|SequenceR|175|166|FGDKLVGRIS

>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 2 GDKLVGRIS 10
GDKLVG+++
Sbjct: 46 GDKLVGQVA 54


>sp|Y482_METJA|UNCHARACTERIZED protein MJ0482|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGDKLVGRI 9
FGD ++GR+
Sbjct: 100 FGDIVIGRV 108


>sp|Y067_METJA|UNCHARACTERIZED protein MJ0067|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGDKLVGRI 9
FGDK++G I
Sbjct: 75 FGDKIIGLI 83


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 FGDKLVGRIS 10
FG KLVG+ S
Sbjct: 807 FGKKLVGKDS 816


>sp|RRP4_METST|EXOSOME complex component Rrp4|Methanosphaera stadtmanae (strain ATCC

Query: 1 FGDKLVGRIS 10
+GD ++GR++
Sbjct: 62 YGDLVIGRVT 71


>sp|RNP1_SULTO|RIBONUCLEASE P protein component 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GDKLVGRIS 10
G KLVGRI
Sbjct: 65 GSKLVGRIE 73


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC

Query: 3 DKLVGRI 9
DKL+GR+
Sbjct: 38 DKLIGRV 44


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 GDKLVGRI 9
GDK+VG I
Sbjct: 605 GDKVVGTI 612


>sp|RRP4_THEVO|EXOSOME complex component Rrp4|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GDKLVGRI 9
GDK++G+I
Sbjct: 64 GDKVIGKI 71


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 2 GDKLVGRIS 10
G+KLVG+++
Sbjct: 46 GEKLVGQVA 54


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GDKLVGRIS 10
GD +VGR++
Sbjct: 592 GDMVVGRVN 600


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain ATCC

Query: 1 FGDKLVGR 8
FGD VGR
Sbjct: 234 FGDFFVGR 241


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GDKLVGRIS 10
G+KLVG+++
Sbjct: 46 GEKLVGQVA 54


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GDKLVGRI 9
GD++ GRI
Sbjct: 581 GDRVTGRI 588


>sp|RNP1_PYRFU|RIBONUCLEASE P protein component 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GDKLVGR 8
G+KLVGR
Sbjct: 110 GEKLVGR 116


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 2 GDKLVGRIS 10
G+KLVG+++
Sbjct: 46 GEKLVGQVA 54


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GDKLVGRIS 10
G+KLVG+++
Sbjct: 46 GEKLVGQVA 54


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 2 GDKLVGRIS 10
G+KLVG+++
Sbjct: 46 GEKLVGQVA 54


>sp|Y1451_METJA|UNCHARACTERIZED protein MJ1451|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGDKLVGRIS 10
FG L GRI+
Sbjct: 234 FGTTLAGRIT 243


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 GDKLVGRI 9
GDK VG++
Sbjct: 65 GDKTVGKV 72


>sp|FDHD_SULTO|SULFUR carrier protein FdhD|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DKLVGRI 9
DKL+GR+
Sbjct: 174 DKLIGRL 180


>sp|RRP4_THEAC|EXOSOME complex component Rrp4|Thermoplasma acidophilum (strain ATCC

Query: 2 GDKLVGRI 9
GDK++G++
Sbjct: 64 GDKVIGKV 71


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DKLVGRIS 10
DKLVG IS
Sbjct: 210 DKLVGVIS 217


>sp|PMDHS_METKA|PHOSPHOMEVALONATE dehydratase small subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 GDKLVGRI 9
G+KL GR+
Sbjct: 51 GEKLTGRV 58


>sp|Y609_METJA|UNCHARACTERIZED protein MJ0609|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGDKLVGR 8
FG K VGR
Sbjct: 142 FGSKAVGR 149




35|SequenceR|180|171|YLVYTFGDKL

>sp|TYSY_METTM|PUTATIVE thymidylate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 2 LVYTFGDKL 10
VYT+G++L
Sbjct: 95 FVYTYGNRL 103


>sp|TYSY_METTH|PUTATIVE thymidylate synthase|Methanothermobacter thermautotrophicus (strain

Query: 2 LVYTFGDKL 10
VYT+G++L
Sbjct: 95 FVYTYGNRL 103


>sp|HELS_METVS|ATP-DEPENDENT DNA helicase Hel308|Methanococcus vannielii (strain ATCC 35089

Query: 2 LVYTFGDKL 10
++ TFGDK+
Sbjct: 723 IISTFGDKV 731


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LVYTFGDKL 10
L Y FGD++
Sbjct: 355 LAYMFGDEI 363


>sp|RL10E_AERPE|LARGE ribosomal subunit protein uL16|Aeropyrum pernix (strain ATCC

Query: 1 YLVYTFGDK 9
YL T GDK
Sbjct: 74 YLATTIGDK 82


>sp|KPYK_THEAC|PYRUVATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 YTFGDKL 10
Y+FGD L
Sbjct: 458 YSFGDSL 464


>sp|RFHPS_METJA|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VYTFGDK 9
+Y FGDK
Sbjct: 289 IYAFGDK 295


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 YLVYTFGDKL 10
Y +YT+G+++
Sbjct: 457 YEIYTYGEQV 466


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 YLVYTFGDKL 10
Y T+GDK+
Sbjct: 520 YFYSTYGDKV 529


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 YLVYTFGDKL 10
Y VY GD +
Sbjct: 45 YFVYNVGDDI 54


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LVYTFGDKL 10
LVY F DK+
Sbjct: 263 LVYKFFDKI 271




36|SequenceR|185|176|HGGNIYLVYT

>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 1 HGGNIYL 7
HG N+YL
Sbjct: 248 HGANVYL 254


>sp|G3P_PYRNV|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 HGGNIYLVY 9
HG +YL+Y
Sbjct: 290 HGNELYLMY 298


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 4 NIYLVY 9
NIYLVY
Sbjct: 643 NIYLVY 648


>sp|CHEB_METMP|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcus

Query: 2 GGNIYLV 8
GGN+Y++
Sbjct: 258 GGNVYII 264


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 1 HGGNIYLVY 9
GG +YL+Y
Sbjct: 380 QGGGMYLMY 388


>sp|Y298_ARCFU|UPF0332 protein AF_0298|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HGGNIYLVY 9
H G IYL++
Sbjct: 56 HRGTIYLIW 64


>sp|RAD50_THEAC|DNA double-strand break repair Rad50|Thermoplasma acidophilum (strain

Query: 1 HGGNIYLV 8
HGG+ Y++
Sbjct: 75 HGGHTYII 82


>sp|THIL_ARCFU|THIAMINE-MONOPHOSPHATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GGNIYLVYT 10
GG+ LVYT
Sbjct: 250 GGDFELVYT 258


>sp|HIS7_METB6|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanoregula boonei (strain DSM 21154

Query: 2 GGNIYLVYT 10
GG YLVYT
Sbjct: 109 GGRGYLVYT 117


>sp|DGGGP_ARCFU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GGNIYLVYT 10
GN+Y+ +T
Sbjct: 141 AGNVYIAFT 149


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 HGGNIYLVY 9
HGG + LV+
Sbjct: 222 HGGGVDLVF 230


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HGGNIYLVY 9
GN Y+VY
Sbjct: 488 QNGNYYIVY 496


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HGGNIYLVY 9
HGG + LV+
Sbjct: 223 HGGGVDLVF 231


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 1 HGGNIYLVYT 10
HGG + +YT
Sbjct: 543 HGGVVEKIYT 552


>sp|Y1350_METJA|UNCHARACTERIZED protein MJ1350|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HGGNIYL 7
HGG IY+
Sbjct: 183 HGGAIYI 189




37|SequenceR|190|181|ITWPPHGGNI

>sp|HMD_METVS|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ITWPPHGGN 9
ITW P GG+
Sbjct: 146 ITWLPKGGS 154


>sp|HMD_METMP|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ITWPPHGGN 9
ITW P GG+
Sbjct: 146 ITWLPKGGS 154


>sp|HMD_METTL|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermococcus thermolithotrophicus

Query: 1 ITWPPHGGN 9
ITW P GG+
Sbjct: 146 ITWLPKGGS 154


>sp|SPEH_PYRAR|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 TWPPHG 7
TWP HG
Sbjct: 77 TWPEHG 82


>sp|SPEH_PYRAE|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 TWPPHG 7
TWP HG
Sbjct: 77 TWPEHG 82


>sp|HMD_METVO|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus voltae

Query: 1 ITWPPHGGN 9
ITW P GG+
Sbjct: 146 ITWLPKGGS 154


>sp|HMD_METM7|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 ITWPPHGGN 9
ITW P GG+
Sbjct: 146 ITWLPKGGS 154


>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ITWPP 5
ITWPP
Sbjct: 68 ITWPP 72


>sp|HMD_METM5|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 ITWPPHGGN 9
ITW P GG+
Sbjct: 146 ITWLPKGGS 154


>sp|SPEH_PYRNV|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 TWPPHG 7
TWP HG
Sbjct: 76 TWPEHG 81


>sp|SYD_PYRHO|ASPARTATE--TRNA(ASP) ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PPHGG 8
PPHGG
Sbjct: 401 PPHGG 405


>sp|SYD_PYRFU|ASPARTATE--TRNA(ASP) ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PPHGG 8
PPHGG
Sbjct: 401 PPHGG 405


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 PPHGG 8
PPHGG
Sbjct: 401 PPHGG 405


>sp|SYDND_METKA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 PPHGG 8
PPHGG
Sbjct: 394 PPHGG 398


>sp|SYDND_HALSA|ASPARTATE--TRNA(ASP/ASN) ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 PPHGG 8
PPHGG
Sbjct: 399 PPHGG 403


>sp|SYDND_AERPE|ASPARTATE--TRNA(ASP/ASN) ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PPHGG 8
PPHGG
Sbjct: 405 PPHGG 409


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PPHGG 8
PPHGG
Sbjct: 401 PPHGG 405


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 ITWPPHGGNI 10
+ W P GG+I
Sbjct: 609 LAWTPVGGDI 618


>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TWPPHGGNI 10
T PPHGG +
Sbjct: 6 TPPPHGGKL 14


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ITWPPHGGNI 10
+ W P GG+I
Sbjct: 634 LAWTPIGGDI 643


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ITWPPH 6
+ WPPH
Sbjct: 318 VNWPPH 323


>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 ITWPPHGG 8
I+W P GG
Sbjct: 157 ISWLPKGG 164


>sp|PRIS_METKA|DNA primase small subunit PriS|Methanopyrus kandleri (strain AV19 /

Query: 1 ITWPPHGG 8
+TWP GG
Sbjct: 250 LTWPGRGG 257


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 3 WPPHG 7
WPP G
Sbjct: 154 WPPEG 158


>sp|RS8E_METBU|SMALL ribosomal subunit protein eS8|Methanococcoides burtonii (strain

Query: 4 PPHGGN 9
P HGGN
Sbjct: 45 PTHGGN 50


>sp|RL18_THEON|LARGE ribosomal subunit protein uL18|Thermococcus onnurineus (strain

Query: 3 WPPHGGN 9
W HGGN
Sbjct: 73 WKGHGGN 79


>sp|CDPAS_PYRCJ|CDP-ARCHAEOL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ITWPPHGGN 9
+ WPP+ N
Sbjct: 10 LIWPPYVAN 18


>sp|MTNA_PYRHO|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus horikoshii

Query: 1 ITWPPHGGNI 10
+ WPP N+
Sbjct: 340 VVWPPFKRNL 349


>sp|MTNA_PYRFU|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus furiosus (strain

Query: 1 ITWPPHGGNI 10
+ WPP N+
Sbjct: 340 VVWPPFKRNL 349


>sp|MTNA_PYRAB|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus abyssi (strain

Query: 1 ITWPPHGGNI 10
+ WPP N+
Sbjct: 340 VVWPPFKRNL 349


>sp|PDXT_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum arsenaticum (strain

Query: 2 TWPP 5
TWPP
Sbjct: 151 TWPP 154


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TWPPHGGN 9
TWP H N
Sbjct: 98 TWPEHSEN 105


>sp|RL18_THESM|LARGE ribosomal subunit protein uL18|Thermococcus sibiricus (strain DSM

Query: 3 WPPHGGN 9
W HGGN
Sbjct: 73 WKGHGGN 79


>sp|RL18_THEKO|LARGE ribosomal subunit protein uL18|Thermococcus kodakarensis (strain

Query: 3 WPPHGGN 9
W HGGN
Sbjct: 73 WKGHGGN 79


>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 ITWPPHGGNI 10
+ W P GG +
Sbjct: 72 VNWMPGGGTV 81


>sp|CDPAS_PYRIL|CDP-ARCHAEOL synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ITWPPHGGN 9
+ WPP+ N
Sbjct: 9 LIWPPYVAN 17


>sp|DLD_ARCFU|D-LACTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ITWPPHGG 8
+++PPH G
Sbjct: 121 LSFPPHPG 128


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 2 TWPP 5
TWPP
Sbjct: 422 TWPP 425


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 WPPHG 7
WPP G
Sbjct: 36 WPPFG 40


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC

Query: 2 TWPPH 6
TWP H
Sbjct: 32 TWPDH 36


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 TWPPH 6
TWP H
Sbjct: 32 TWPDH 36


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 PPHGGNI 10
PP GG I
Sbjct: 298 PPEGGEI 304


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TWPP 5
TWPP
Sbjct: 424 TWPP 427


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TWPP 5
TWPP
Sbjct: 422 TWPP 425


>sp|DTDA_META3|D-AMINOACYL-TRNA deacylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 6 HGGNI 10
HGGNI
Sbjct: 86 HGGNI 90


>sp|ARFB_METS3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanobrevibacter smithii (strain

Query: 6 HGGNI 10
HGGNI
Sbjct: 109 HGGNI 113


>sp|ARFB_METJA|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus jannaschii (strain

Query: 6 HGGNI 10
HGGNI
Sbjct: 107 HGGNI 111


>sp|ARFB_METIM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus infernus (strain

Query: 6 HGGNI 10
HGGNI
Sbjct: 108 HGGNI 112


>sp|ARFB_METFA|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus fervens (strain DSM

Query: 6 HGGNI 10
HGGNI
Sbjct: 107 HGGNI 111


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ITWPPHGG 8
I +P HGG
Sbjct: 191 IPYPEHGG 198


>sp|SYP_METTH|PROLINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 WPPHG 7
W PHG
Sbjct: 46 WMPHG 50


>sp|NUCS_METJA|ENDONUCLEASE NucS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ITWPPHGGNI 10
+ W P G +I
Sbjct: 75 VNWQPSGSSI 84


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TWPP 5
TWPP
Sbjct: 419 TWPP 422


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 2 TWPP 5
TWPP
Sbjct: 419 TWPP 422


>sp|CDPAS_PYRAE|CDP-ARCHAEOL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ITWPPHGGN 9
+ WPP+ N
Sbjct: 9 LIWPPYVAN 17


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 3 WPPHG 7
WPP G
Sbjct: 374 WPPEG 378


>sp|CDPAS_PYRAR|CDP-ARCHAEOL synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ITWPPHGGN 9
+ WPP+ N
Sbjct: 9 LIWPPYVAN 17


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 WPPHGGNI 10
W PHG I
Sbjct: 40 WYPHGFGI 47


>sp|Y1671_PYRHO|UPF0173 metal-dependent hydrolase PH1671|Pyrococcus horikoshii (strain ATCC

Query: 2 TWPP 5
TWPP
Sbjct: 193 TWPP 196


>sp|Y500_PYRAB|UPF0173 metal-dependent hydrolase PYRAB05000|Pyrococcus abyssi (strain GE5

Query: 2 TWPP 5
TWPP
Sbjct: 193 TWPP 196


>sp|Y1764_PYRFU|UPF0173 metal-dependent hydrolase PF1764|Pyrococcus furiosus (strain ATCC

Query: 2 TWPP 5
TWPP
Sbjct: 193 TWPP 196


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 1 ITWPPHG 7
+ W PHG
Sbjct: 901 LKWLPHG 907


>sp|NEP1_PYRNV|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum neutrophilum

Query: 4 PPHGGNI 10
PPHG ++
Sbjct: 122 PPHGDSL 128


>sp|RL3_METB6|LARGE ribosomal subunit protein uL3|Methanoregula boonei (strain DSM

Query: 2 TWPPHGG 8
+WP H G
Sbjct: 29 SWPEHSG 35


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ITWPPHGGN 9
+ W HGG+
Sbjct: 93 VAWVTHGGH 101




38|SequenceR|195|186|QIYDLITWPP

>sp|RPO1C_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Aeropyrum pernix (strain ATCC 700893

Query: 2 IYDLITWP 9
I DL+TWP
Sbjct: 328 IADLMTWP 335


>sp|GUAAB_SULTO|GMP synthase [glutamine-hydrolyzing] subunit B|Sulfurisphaera tokodaii

Query: 2 IYDLITWPP 10
+YD+ T PP
Sbjct: 356 VYDITTKPP 364


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 YDLITWPP 10
YDL TW P
Sbjct: 358 YDLETWMP 365


Query: 3 YDLITWPP 10
Y+L+ W P
Sbjct: 153 YELVNWKP 160


>sp|Y1120_THEKO|UPF0127 protein TK1120|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 DLITWPP 10
DLI+W P
Sbjct: 110 DLISWTP 116


>sp|SYS_HALLT|SERINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 YDLITWPP 10
YDL W P
Sbjct: 345 YDLEVWAP 352


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 3 YDLITW 8
YDL++W
Sbjct: 275 YDLLSW 280


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YDLITW 8
YDL++W
Sbjct: 273 YDLLSW 278


>sp|SYS_KORCO|SERINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 YDLITWPP 10
Y+LI W P
Sbjct: 151 YELIDWEP 158


>sp|LYSX_SULTO|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IYDLITW 8
IYDL+ W
Sbjct: 6 IYDLLRW 12


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 YDLITWPP 10
Y+LI W P
Sbjct: 154 YELIDWKP 161


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QIYDLIT 7
IYDLIT
Sbjct: 668 HIYDLIT 674


>sp|LEUC1_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 3 YDLITWPP 10
YD+ W P
Sbjct: 263 YDVTNWEP 270


>sp|FOLD_PYRCJ|BIFUNCTIONAL protein FolD|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 QIYDLITWPP 10
+IY+L+ PP
Sbjct: 64 EIYELVDVPP 73


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QIYDLITWPP 10
+ YDL W P
Sbjct: 329 KTYDLEVWVP 338


>sp|HDRB1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B1|Methanococcus

Query: 3 YDLITW 8
+DL+TW
Sbjct: 56 FDLMTW 61


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QIYDLITWP 9
++ LITWP
Sbjct: 509 EVPQLITWP 517


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QIYDLITWPP 10
+ YDL W P
Sbjct: 329 KTYDLEVWVP 338


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 YDLITWPP 10
YDL W P
Sbjct: 336 YDLEVWMP 343


>sp|Y581_THEON|UPF0127 protein TON_0581|Thermococcus onnurineus (strain NA1)

Query: 4 DLITWPP 10
DLI W P
Sbjct: 110 DLIRWSP 116


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 YDLITWPP 10
Y++I W P
Sbjct: 151 YEIIKWKP 158


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 YDLITWPP 10
Y++I W P
Sbjct: 151 YEIIKWKP 158


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 YDLITWPP 10
Y++I W P
Sbjct: 151 YEIIKWKP 158


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 YDLITWPP 10
Y++I W P
Sbjct: 151 YEIIKWKP 158


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 YDLITWPP 10
Y++I W P
Sbjct: 151 YEIIKWKP 158


>sp|FPOM_METMA|F(420)H(2) dehydrogenase subunit M|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QIYDLITWPP 10
Q Y+ ++W P
Sbjct: 58 QFYESVSWIP 67


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 YDLITWPP 10
Y++I W P
Sbjct: 151 YEIIKWKP 158


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 YDLITWPP 10
YDL W P
Sbjct: 359 YDLEAWMP 366


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 YDLITW 8
YDL+ W
Sbjct: 264 YDLLVW 269


>sp|FOLD_PYRAE|BIFUNCTIONAL protein FolD|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QIYDLITWPP 10
+IY+L + PP
Sbjct: 68 EIYELYSAPP 77


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YDLITW 8
YDL+ W
Sbjct: 264 YDLLVW 269


>sp|Y1038_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 1 QIYDLITWP 9
QI+ + WP
Sbjct: 204 QIFRFVIWP 212


>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 YDLITWPP 10
YDL W P
Sbjct: 356 YDLEVWMP 363


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YDLITWPP 10
YDL W P
Sbjct: 353 YDLEAWMP 360


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YDLITW 8
YDL+ W
Sbjct: 264 YDLLVW 269




39|SequenceR|200|191|ASGLHQIYDL

>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1 (strain

Query: 2 SGLHQIYDL 10
SGLH YDL
Sbjct: 115 SGLHPAYDL 123


>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ASGLHQIYDL 10
A LH+IYD+
Sbjct: 438 ARDLHEIYDI 447


>sp|ATGT_NATPD|TRNA-GUANINE(15) transglycosylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ASGLHQIYDL 10
A GLH ++D
Sbjct: 77 ADGLHDLFDF 86


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ASGLHQIYDL 10
ASGL ++Y++
Sbjct: 200 ASGLDRVYEI 209


>sp|DNLI1_METBF|DNA ligase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 ASGLHQIYDL 10
ASG+ + +DL
Sbjct: 399 ASGMRETFDL 408


>sp|PHAC_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula hispanica (strain ATCC 33960

Query: 1 ASGLHQIYDL 10
A+G+H + DL
Sbjct: 439 AAGIHSVADL 448


>sp|AMZA_NATPD|ARCHAEMETZINCIN pharaonis (strain ATCC 35678

Query: 1 ASGLHQIYD 9
+SGL +YD
Sbjct: 20 SSGLRSVYD 28


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SGLHQIYDL 10
SG+ +YDL
Sbjct: 381 SGVFDVYDL 389


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GLHQIYD 9
G+H +YD
Sbjct: 125 GIHYLYD 131




40|SequenceR|205|196|SLSALASGLH

>sp|ATGT_NATPD|TRNA-GUANINE(15) transglycosylase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 ALASGLH 10
ALA GLH
Sbjct: 75 ALADGLH 81




41|SequenceR|210|201|PISCPSLSAL

>sp|TRPD_METST|ANTHRANILATE phosphoribosyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 PISCPS 6
PISCP+
Sbjct: 182 PISCPT 187


>sp|Y1306_METJA|UNCHARACTERIZED protein MJ1306|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PISCPSLSAL 10
P+SC LSA+
Sbjct: 59 PLSCSYLSAV 68


>sp|VAPB5_METJA|PUTATIVE antitoxin VapB5|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PISCPSL 7
P++CPSL
Sbjct: 59 PLTCPSL 65




42|SequenceR|215|206|RYVRHPISCP

>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 5 HPISCP 10
HP++CP
Sbjct: 111 HPVNCP 116


>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 4 RHPISCP 10
RHPIS P
Sbjct: 280 RHPISFP 286


>sp|Y3401_METJA|UNCHARACTERIZED protein MJECS01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RYVRHPIS 8
+Y RHPI+
Sbjct: 7 KYYRHPIN 14


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RYVRHPIS 8
+YVR+P+S
Sbjct: 294 KYVRNPVS 301


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 RYVRHPIS 8
RYV HP+S
Sbjct: 77 RYVGHPLS 84


>sp|Y804_METJA|UNCHARACTERIZED protein MJ0804|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RYVRHPISC 9
++VRH I C
Sbjct: 20 KFVRHCIGC 28


>sp|Y307_ARCFU|UNCHARACTERIZED protein AF_0307|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YVRHPI 7
+VRHPI
Sbjct: 86 FVRHPI 91


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YVRHPISC 9
++R+PI C
Sbjct: 163 HIRNPIDC 170


>sp|RPO11_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermoplasma volcanium (strain ATCC

Query: 2 YVRHPI 7
Y++HPI
Sbjct: 52 YIKHPI 57


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 RYVRHPIS 8
+YVR+P++
Sbjct: 294 KYVRNPVT 301


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM 22066

Query: 2 YVRHPIS 8
YV HP+S
Sbjct: 316 YVTHPLS 322


>sp|Y772_METJA|UNCHARACTERIZED protein MJ0772|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VRHPISC 9
+R+PI C
Sbjct: 167 IRYPIDC 173


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YVRHPIS 8
Y RHPI+
Sbjct: 32 YKRHPIN 38


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RYVRHPIS 8
RY+R+P++
Sbjct: 358 RYIRNPLT 365


>sp|RPO11_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermoplasma acidophilum (strain

Query: 2 YVRHPI 7
Y++HP+
Sbjct: 52 YIKHPV 57


>sp|IF2B_PYRAR|TRANSLATION initiation factor 2 subunit|Pyrobaculum arsenaticum (strain DSM

Query: 1 RYVRHPISCP 10
R++R+ + CP
Sbjct: 93 RFIRYYVVCP 102


>sp|IF2B_PYRNV|TRANSLATION initiation factor 2 subunit|Pyrobaculum neutrophilum (strain DSM

Query: 1 RYVRHPISCP 10
R++R+ + CP
Sbjct: 93 RFIRYYVVCP 102


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 YVRHPI 7
Y RHP+
Sbjct: 286 YARHPV 291


>sp|IF2B_PYRAE|TRANSLATION initiation factor 2 subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 RYVRHPISCP 10
R++R+ + CP
Sbjct: 93 RFIRYYVVCP 102


>sp|IF2B_PYRIL|TRANSLATION initiation factor 2 subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RYVRHPISCP 10
R++R+ + CP
Sbjct: 93 RFIRYYVVCP 102


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 YVRHPI 7
Y RHP+
Sbjct: 286 YARHPV 291




43|SequenceR|220|211|LSHAQRYVRH

>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 1 LSHAQRYVRH 10
LSHA R RH
Sbjct: 192 LSHAVRLPRH 201


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 SHAQRYVR 9
SH +R+VR
Sbjct: 412 SHTRRFVR 419


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 AQRYVRH 10
A+RY+RH
Sbjct: 1036 ARRYLRH 1042


>sp|Y871_METJA|UNCHARACTERIZED protein MJ0871|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSHAQRYVRH 10
L+ + RYV+H
Sbjct: 269 LTFSTRYVKH 278


>sp|NADK_METST|NAD kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 HAQRYV 8
HAQRY+
Sbjct: 71 HAQRYL 76


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain ATCC

Query: 1 LSHAQRYVRH 10
+SHA R RH
Sbjct: 194 ISHAVRLPRH 203


>sp|LYSK_PYRAE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrobaculum aerophilum

Query: 1 LSHAQRY 7
L HA+RY
Sbjct: 190 LGHAERY 196


>sp|DCD_AERPE|DCTP deaminase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSHAQRYVR 9
L H Q Y+R
Sbjct: 79 LLHTQEYIR 87


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 4 AQRYVRH 10
A RY+RH
Sbjct: 677 ASRYLRH 683




44|SequenceR|225|216|LFSCLLSHAQ

>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 2 FSCLLSHAQ 10
+SC L+HA+
Sbjct: 305 YSCSLNHAR 313


>sp|QUEC1_SULTO|7-CYANO-7-DEAZAGUANINE synthase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FSCLLSH 8
+SCLL H
Sbjct: 164 YSCLLGH 170




45|SequenceR|230|221|IGSWPLFSCL

>sp|HYD1D_PYRFU|SULFHYDROGENASE 1 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IGSWP 5
IGSWP
Sbjct: 152 IGSWP 156


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GSWPLF 7
G WPLF
Sbjct: 244 GMWPLF 249


>sp|PORB_PYRAB|PYRUVATE synthase subunit PorB|Pyrococcus abyssi (strain GE5 /

Query: 2 GSWPLF 7
G WPLF
Sbjct: 244 GMWPLF 249


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GSWPLF 7
G WPLF
Sbjct: 244 GIWPLF 249


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 IGSWPLFSC 9
+G +PL SC
Sbjct: 68 VGIYPLGSC 76


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 IGSWPLFSC 9
+G +PL SC
Sbjct: 68 VGIYPLGSC 76




46|SequenceR|235|226|GSKSSIGSWP

>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC

Query: 1 GSKSSIGSW 9
S+SSIG+W
Sbjct: 47 ASESSIGTW 55


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GSKSSIGSW 9
S+SSIG+W
Sbjct: 42 ASESSIGTW 50


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 GSKSSIGSW 9
S+SSIG+W
Sbjct: 46 ASESSIGTW 54


>sp|RBL_METJA|RIBULOSE bisphosphate carboxylase|Methanocaldococcus jannaschii (strain

Query: 3 KSSIGSW 9
+SSIG+W
Sbjct: 36 ESSIGTW 42


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 5 SIGSWP 10
S+G+WP
Sbjct: 464 SMGAWP 469


>sp|FLAB3_METVO|FLAGELLIN B3|Methanococcus voltae

Query: 5 SIGSWP 10
+IG+WP
Sbjct: 141 AIGAWP 146


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 5 SIGSWP 10
S+G+WP
Sbjct: 464 SMGAWP 469




47|SequenceR|242|231|MTRSYEIGSKSS

>sp|ASSY_METHJ|ARGININOSUCCINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 MTRSYEIG 8
MTR +EIG
Sbjct: 148 MTREWEIG 155


>sp|Y612_ARCFU|UNCHARACTERIZED protein AF_0612|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TRSYEIGS 9
TRS+EI S
Sbjct: 119 TRSFEISS 126




THE END