NAA60_HUMAN Blast Output
Archaea
1|Sequence|1|10|MTEVVPSSAL

>sp|PGK2_METAC|PHOSPHOGLYCERATE kinase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TEVVPSSA 9
TEV+PS A
Sbjct: 171 TEVLPSGA 178


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TEVVPSSA 9
TEV+PS A
Sbjct: 171 TEVLPSGA 178




2|Sequence|6|15|PSSALSEVSL

***** No hits found ******


3|Sequence|11|20|SEVSLRLLCH

***** No hits found ******


4|Sequence|16|25|RLLCHDDIDT

>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 LCHDDIDT 10
LC DD+DT
Sbjct: 537 LCLDDVDT 544


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LLCHDDIDT 10
+LCHD +T
Sbjct: 147 MLCHDSFNT 155


>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain ATCC

Query: 1 RLLCHDDIDT 10
R++C D IDT
Sbjct: 190 RVICPDKIDT 199


>sp|Y828_METBU|UPF0210 protein Mbur_0828|Methanococcoides burtonii (strain DSM 6242

Query: 1 RLLCHDDID 9
R CH DID
Sbjct: 32 RGCCHSDID 40


>sp|Y3501_METJA|UNCHARACTERIZED protein MJECL01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLCHDDI 8
L CHDDI
Sbjct: 50 LRCHDDI 56


>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LLCHDDID 9
+LC DD+D
Sbjct: 263 MLCTDDLD 270


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LLCHDDID 9
LLC DID
Sbjct: 542 LLCRADID 549


>sp|CBIJ_METJA|COBALT-PRECORRIN-6A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LCHDDID 9
+C DDID
Sbjct: 232 VCFDDID 238


>sp|LEU1_PYRAB|2-ISOPROPYLMALATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 CHDDI 8
CHDD+
Sbjct: 202 CHDDL 206


>sp|CIMA_METPE|PUTATIVE (R)-citramalate synthase CimA|Methanosphaerula palustris (strain

Query: 4 CHDDI 8
CHDD+
Sbjct: 197 CHDDL 201


>sp|AKSA_METMA|HOMOCITRATE synthase AksA|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 CHDDI 8
CHDD+
Sbjct: 214 CHDDL 218


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLCHDDID 9
++C+DD++
Sbjct: 216 IICYDDVE 223


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 1 RLLCHD 6
R LCHD
Sbjct: 177 RKLCHD 182


>sp|TRUB_METKA|PROBABLE tRNA pseudouridine synthase B|Methanopyrus kandleri (strain AV19 /

Query: 1 RLLCHD 6
R LCHD
Sbjct: 179 RKLCHD 184


>sp|TRUB_METBF|PROBABLE tRNA pseudouridine synthase B|Methanosarcina barkeri (strain Fusaro

Query: 1 RLLCHD 6
R LCHD
Sbjct: 177 RKLCHD 182


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 1 RLLCHD 6
R LCHD
Sbjct: 177 RKLCHD 182


>sp|TRUB_SACS2|PROBABLE tRNA pseudouridine synthase B|Saccharolobus solfataricus (strain

Query: 1 RLLCHD 6
R LCHD
Sbjct: 94 RKLCHD 99


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 CHDDIDT 10
C DDI+T
Sbjct: 895 CADDIET 901


>sp|AKSA_METAC|HOMOCITRATE synthase AksA|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 CHDDI 8
CHDD+
Sbjct: 214 CHDDL 218


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 4 CHDDI 8
CHDD+
Sbjct: 196 CHDDL 200


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 LLCHDDID 9
+LCHD +
Sbjct: 144 MLCHDSFN 151


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 1 RLLCHD 6
R LCHD
Sbjct: 182 RKLCHD 187


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLLCHDDID 9
R+L H+D D
Sbjct: 38 RVLIHEDTD 46


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 1 RLLCHDDID 9
R+L H+D++
Sbjct: 43 RVLIHEDVE 51


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 2 LLCHDD 7
LLCH D
Sbjct: 600 LLCHGD 605




5|Sequence|21|30|DDIDTVKHLC

>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DDIDTVKHL 9
DDIDTV+ L
Sbjct: 536 DDIDTVERL 544


>sp|COBD_METTP|PROBABLE cobalamin biosynthesis protein CobD|Methanothrix thermoacetophila

Query: 1 DDIDTVKHL 9
+D+D KHL
Sbjct: 121 EDLDAAKHL 129


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 3 IDTVKH 8
IDTVKH
Sbjct: 65 IDTVKH 70


>sp|HMDX_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 1 DDIDTVKH 8
DDI+ KH
Sbjct: 74 DDIEAAKH 81


>sp|PGK_NATPD|PHOSPHOGLYCERATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 IDTVKHLC 10
+DTV+ LC
Sbjct: 40 VDTVEELC 47


>sp|Y1562_METJA|PUTATIVE membrane protein MJ1562|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DDIDTVKHL 9
+DIDTVK +
Sbjct: 135 NDIDTVKDI 143


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 DDIDTVKHLC 10
DDI ++++C
Sbjct: 628 DDIKNIENMC 637


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DDIDTV 6
DD+DTV
Sbjct: 540 DDVDTV 545


>sp|Y1811_METBU|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcoides

Query: 1 DDIDTVKH 8
DD+DT+ H
Sbjct: 307 DDLDTLIH 314


>sp|AROE_CALMQ|SHIKIMATE dehydrogenase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 1 DDIDTVK 7
DD DT+K
Sbjct: 76 DDADTIK 82


>sp|HMDY_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 1 DDIDTVKH 8
DD++ KH
Sbjct: 85 DDVEAAKH 92


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 2 DIDTVKHL 9
+I+T KHL
Sbjct: 119 EIETAKHL 126


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 DDIDTV 6
DDIDTV
Sbjct: 392 DDIDTV 397




6|Sequence|26|35|VKHLCGDWFP

>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 LCGDWFP 10
+ GDW+P
Sbjct: 154 ITGDWYP 160


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 3 HLCGDW 8
HL GDW
Sbjct: 28 HLAGDW 33


>sp|RS5_METTH|SMALL ribosomal subunit protein uS5|Methanothermobacter

Query: 1 VKHLCGDW 8
V+ CGDW
Sbjct: 114 VRRGCGDW 121


>sp|RS5_METS3|SMALL ribosomal subunit protein uS5|Methanobrevibacter smithii (strain

Query: 1 VKHLCGDW 8
V+ CGDW
Sbjct: 112 VRRGCGDW 119


>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 2 KHLCGDW 8
+H+ GDW
Sbjct: 439 RHMFGDW 445


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 2 KHLCGDW 8
+H+ GDW
Sbjct: 439 RHMFGDW 445


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 5 CGDWFP 10
CG W P
Sbjct: 148 CGSWVP 153


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 2 KHLCGDWF 9
KH G WF
Sbjct: 583 KHTVGHWF 590


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 5 CGDW 8
CGDW
Sbjct: 692 CGDW 695


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CGDWF 9
CG WF
Sbjct: 23 CGQWF 27


>sp|NITR_PYRAB|NITRILASE abyssi (strain GE5 /

Query: 4 LCGDWF 9
+C DWF
Sbjct: 145 ICFDWF 150


>sp|ASD_METJA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanocaldococcus

Query: 1 VKHLCGDWFP 10
+KH+ G ++P
Sbjct: 103 IKHIDGSFYP 112


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 3 HLCGDW 8
++CG+W
Sbjct: 101 YICGEW 106


>sp|Y1127_METJA|UNCHARACTERIZED protein MJ1127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKHLCGD 7
VKH CG+
Sbjct: 186 VKHHCGN 192


>sp|NCSA_HALVD|TRNA 2-thiolation protein NcsA|Haloferax volcanii (strain ATCC 29605

Query: 3 HLCGDWF 9
HLC D F
Sbjct: 20 HLCDDHF 26


>sp|ADHS_METTH|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VKHLCGDW 8
V +C DW
Sbjct: 129 VAEICDDW 136


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 3 HLCGDW 8
++CG+W
Sbjct: 99 YICGEW 104


>sp|HMEC_ARCPA|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus profundus

Query: 1 VKHLCGDWF 9
V H G WF
Sbjct: 255 VMHFAGVWF 263




7|Sequence|31|40|GDWFPIEYPD

>sp|DPHB_PYRHO|DIPHTHINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GDWFPIEYPD 10
G+WFP Y D
Sbjct: 141 GNWFPTSYYD 150


>sp|DPHB_PYRFU|DIPHTHINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GDWFPIEYPD 10
G+WFP Y D
Sbjct: 141 GNWFPTSYYD 150


>sp|AROB_PYRAB|3-DEHYDROQUINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 GDWFPIEYPD 10
GD FPI PD
Sbjct: 46 GDVFPIVIPD 55


>sp|SFSA_PYRIL|SUGAR fermentation stimulation protein homolog|Pyrobaculum islandicum

Query: 3 WFPIEYPD 10
+FPIE PD
Sbjct: 2 YFPIEKPD 9


>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 1 GDWFPIEYP 9
GD PI YP
Sbjct: 148 GDKVPIHYP 156


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDWFPIE 7
G+W P+E
Sbjct: 110 GEWLPVE 116


>sp|AATC_METTH|A-TYPE ATP synthase subunit C|Methanothermobacter thermautotrophicus

Query: 2 DWFPIEYPD 10
D FP YP+
Sbjct: 45 DLFPFAYPN 53


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 1 GDWFPIEY--PD 10
GD+F +EY PD
Sbjct: 305 GDYFKLEYVPPD 316


>sp|DTDA_METAC|D-AMINOACYL-TRNA deacylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DWFPIEYPD 10
+W P+E P+
Sbjct: 37 EWKPLELPE 45


>sp|SFSA_PYRAR|SUGAR fermentation stimulation protein homolog|Pyrobaculum arsenaticum

Query: 3 WFPIEYPD 10
+FP+E PD
Sbjct: 2 YFPLEEPD 9


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GDWFPIEYP 9
GDW +E P
Sbjct: 332 GDWKRVEVP 340


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GDWFPIEY 8
G WF IE+
Sbjct: 254 GKWFAIEH 261


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 1 GDWFPIEY 8
G WF IE+
Sbjct: 254 GKWFAIEH 261


>sp|NADE_METAC|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GDWFPIEY 8
DW IEY
Sbjct: 75 ADWLGIEY 82


>sp|NADE_METMA|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GDWFPIEY 8
DW IEY
Sbjct: 75 ADWLGIEY 82


>sp|Y697_METVS|MEMO1 family protein Mevan_0697|Methanococcus vannielii (strain ATCC

Query: 1 GDWFPIEYPD 10
G ++P+EY D
Sbjct: 9 GIFYPLEYHD 18


>sp|DPHB_METLZ|DIPHTHINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GDWFPI 6
G WFP+
Sbjct: 140 GKWFPM 145


>sp|FDHC_METFO|PROBABLE formate transporter|Methanobacterium formicicum

Query: 1 GDWFPI 6
G WFPI
Sbjct: 206 GIWFPI 211


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 GDWFPIE 7
GDW+P E
Sbjct: 156 GDWYPYE 162


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 2 DWFPIE 7
DW PIE
Sbjct: 209 DWRPIE 214


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 2 DWFPIE 7
DW PIE
Sbjct: 209 DWRPIE 214


>sp|FDHC_METTF|PROBABLE formate transporter|Methanothermobacter thermautotrophicus

Query: 1 GDWFPI 6
G WFPI
Sbjct: 206 GIWFPI 211


>sp|RL3_STAMF|LARGE ribosomal subunit protein uL3|Staphylothermus marinus (strain ATCC

Query: 2 DWFPIEYPD 10
W+P+E P
Sbjct: 375 SWYPLEAPQ 383


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 DWFPIEY 8
DW IEY
Sbjct: 154 DWLGIEY 160


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DWFPIEYPD 10
+FPI Y D
Sbjct: 344 QFFPIRYTD 352


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 1 GDWFPIEYP 9
G+W I YP
Sbjct: 34 GEWRIITYP 42


>sp|DAPF_METKA|DIAMINOPIMELATE epimerase|Methanopyrus kandleri (strain AV19 /

Query: 1 GDWFPIEYPD 10
G W +E P+
Sbjct: 108 GGWIAVEVPE 117




8|Sequence|36|45|IEYPDSWYRD

>sp|RS17E_NANEQ|SMALL ribosomal subunit protein eS17|Nanoarchaeum equitans (strain

Query: 3 YPDSWYRD 10
YPD W +D
Sbjct: 20 YPDIWTKD 27


>sp|OGT_METAC|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IEYPDSW 7
IE PDSW
Sbjct: 34 IEVPDSW 40


>sp|FRHA_METTH|COENZYME F420 hydrogenase subunit alpha|Methanothermobacter

Query: 4 PDSWYRD 10
P+SWY D
Sbjct: 232 PESWYDD 238


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IEYPDSW 7
IEY DSW
Sbjct: 266 IEYRDSW 272


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IEYPDSW 7
+EYP+ W
Sbjct: 388 VEYPEGW 394


>sp|NUSA_METJA|PROBABLE transcription termination protein NusA|Methanocaldococcus

Query: 1 IEYPDSWYR 9
IEY D W +
Sbjct: 69 IEYSDDWRK 77


>sp|RS17E_KORCO|SMALL ribosomal subunit protein eS17|Korarchaeum cryptofilum (strain

Query: 2 EYPDSWYRD 10
+YPD W D
Sbjct: 19 QYPDLWTED 27


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IEYPDSWY 8
+E+PD++Y
Sbjct: 474 VEFPDNFY 481


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IEYPDSWY 8
+E+PD++Y
Sbjct: 474 VEFPDNFY 481


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IEYPDSWY 8
+E+PD++Y
Sbjct: 474 VEFPDNFY 481


>sp|CBID_ARCFU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YPDSWYRD 10
YP+ W +D
Sbjct: 11 YPEKWIKD 18


>sp|WTPA_PYRAB|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus abyssi (strain GE5 /

Query: 1 IEYPDSWY 8
++ PD WY
Sbjct: 134 LKNPDKWY 141


>sp|SRP19_ARCFU|SIGNAL recognition particle 19 kDa|Archaeoglobus fulgidus (strain ATCC

Query: 2 EYPDSWYRD 10
+YP SW+ +
Sbjct: 54 KYPKSWWEE 62


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 4 PDSWYRD 10
PD W RD
Sbjct: 184 PDFWRRD 190


>sp|PTH_NANEQ|PEPTIDYL-TRNA hydrolase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 EYPDSWYRD 10
E D WYR+
Sbjct: 39 ELFDRWYRE 47


>sp|TRM56_NITMS|TRNA (cytidine(56)-2'-O)-methyltransferase|Nitrosopumilus maritimus

Query: 1 IEYPDSW 7
IE+ DSW
Sbjct: 60 IEFIDSW 66


>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EYPDSWYRD 10
+ PD W RD
Sbjct: 182 DMPDFWRRD 190


>sp|WTPA_PYRFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PDSWY 8
PD WY
Sbjct: 138 PDKWY 142


>sp|TRPB2_AERPE|TRYPTOPHAN synthase beta chain 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 EYPDSWY 8
E P SWY
Sbjct: 14 EVPTSWY 20


>sp|HMGCS_SACS2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PDSWYRD 10
PD W RD
Sbjct: 186 PDFWRRD 192


>sp|PANB_AERPE|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 EYPDSWYRD 10
+YP +W D
Sbjct: 27 DYPTAWIAD 35


>sp|HMGCS_SULAC|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PDSWYRD 10
PD W RD
Sbjct: 184 PDFWRRD 190


>sp|SAHH_HALSA|ADENOSYLHOMOCYSTEINASE salinarum (strain ATCC 700922

Query: 2 EYPDSW 7
EY DSW
Sbjct: 418 EYMDSW 423


>sp|SAHH_HALS3|ADENOSYLHOMOCYSTEINASE salinarum (strain ATCC 29341

Query: 2 EYPDSW 7
EY DSW
Sbjct: 418 EYMDSW 423


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 PDSWYRD 10
PD W RD
Sbjct: 186 PDFWRRD 192


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 PDSWYRD 10
PD W RD
Sbjct: 186 PDFWRRD 192


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 PDSWYRD 10
PD W RD
Sbjct: 186 PDFWRRD 192


>sp|HMGCS_CALMQ|HYDROXYMETHYLGLUTARYL-COA synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 PDSWYRD 10
PD W RD
Sbjct: 184 PDFWRRD 190


>sp|HMGCS_ARCFU|HYDROXYMETHYLGLUTARYL-COA synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PDSWYRD 10
PD W RD
Sbjct: 182 PDFWRRD 188


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 PDSWYRD 10
PD W RD
Sbjct: 186 PDFWRRD 192


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 PDSWYRD 10
PD W RD
Sbjct: 186 PDFWRRD 192


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 PDSWYRD 10
PD W RD
Sbjct: 186 PDFWRRD 192


>sp|WTPA_PYRHO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IEYPDSWY 8
++ PD WY
Sbjct: 130 LKNPDKWY 137


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YPDSWYRD 10
+P +W+RD
Sbjct: 45 HPKAWHRD 52


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 EYPDSWY 8
E PD WY
Sbjct: 190 EKPDHWY 196


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EYPDSWYRD 10
E+P YRD
Sbjct: 238 EFPSEKYRD 246


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IEYPDSW 7
I+Y DSW
Sbjct: 266 IKYRDSW 272


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 YPDSW 7
YPD+W
Sbjct: 151 YPDNW 155


>sp|Y763_ARCFU|UNCHARACTERIZED protein AF_0763|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YPDSW 7
YPD W
Sbjct: 59 YPDDW 63


>sp|PURA1_METAC|ADENYLOSUCCINATE synthetase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EYPDSWYR 9
EY +WY+
Sbjct: 185 EYCSNWYK 192


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EYPDSWY 8
E PD WY
Sbjct: 10 EMPDHWY 16


>sp|CSG_METVO|S-LAYER protein|Methanococcus voltae

Query: 4 PDSWYRD 10
P WY D
Sbjct: 171 PSDWYAD 177


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EYPDSWYRD 10
+YP S Y D
Sbjct: 64 DYPSSGYED 72


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 1 IEYPDSWY 8
+EYPD Y
Sbjct: 337 MEYPDCCY 344


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EYPDSWYR 9
E+PD +Y+
Sbjct: 111 EFPDKYYK 118


>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YPDSWYRD 10
Y + WY+D
Sbjct: 128 YANGWYQD 135


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 EYPDSW 7
EYP+ W
Sbjct: 382 EYPEVW 387




9|Sequence|41|50|SWYRDITSNK

>sp|NFI_NANEQ|BIFUNCTIONAL methyltransferase-like/endonuclease|Nanoarchaeum equitans (strain

Query: 2 WYRDITSN 9
WYR ++SN
Sbjct: 64 WYRVVSSN 71


>sp|THI4_PYRHO|THIAMINE thiazole synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SWYRDITSN 9
S+YRD+ +N
Sbjct: 14 SYYRDLLNN 22


>sp|THI4_PYRAB|THIAMINE thiazole synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 SWYRDITSN 9
S+YRD+ +N
Sbjct: 14 SYYRDLLNN 22


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 SWYRDITSN 9
SWY D+T +
Sbjct: 1154 SWYLDVTED 1162


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 SWYRDITSN 9
SWY D+T +
Sbjct: 1123 SWYLDVTED 1131


>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 1 SWYRDITS 8
SW RDIT
Sbjct: 23 SWIRDITG 30


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 SWYRDITSN 9
SWY D+T +
Sbjct: 979 SWYLDVTED 987


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 SWYRDITSN 9
SWY D+T +
Sbjct: 1520 SWYIDVTED 1528


>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 WYRDI 6
WYRD+
Sbjct: 132 WYRDM 136


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 SWYRDITSN 9
SWY D+T +
Sbjct: 1160 SWYIDVTED 1168


>sp|ANTRB_HALVD|PUTATIVE ABC transporter anion-binding protein|Haloferax volcanii (strain

Query: 1 SWYRDI 6
+WYR+I
Sbjct: 191 TWYREI 196


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 1 SWYRDITSN 9
+W+R IT N
Sbjct: 293 TWFRFITKN 301


>sp|RL6_NATPD|LARGE ribosomal subunit protein uL6|Natronomonas pharaonis (strain ATCC

Query: 2 WYRDIT 7
WY DIT
Sbjct: 34 WYPDIT 39


>sp|Y2105_SACS2|UNCHARACTERIZED protein SSO2105|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WYRDIT 7
WY D+T
Sbjct: 241 WYSDVT 246




10|Sequence|46|55|ITSNKKFFSL

>sp|HYD2G_PYRFU|SULFHYDROGENASE 2 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ITSNKKFFSL 10
+TS +K FSL
Sbjct: 17 LTSREKLFSL 26


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 ITSNKKFFS 9
I +NKKF S
Sbjct: 318 IEANKKFIS 326


>sp|WECB_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ITSNKKFFSL 10
IT N+K+F L
Sbjct: 194 ITKNEKYFLL 203




11|Sequence|51|60|KFFSLAATYR

>sp|QUEC_METB6|7-CYANO-7-DEAZAGUANINE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 FFSLAATY 9
F SLAA+Y
Sbjct: 101 FLSLAASY 108


>sp|PYRB_METHJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanospirillum hungatei

Query: 1 KFFSLAATYR 10
KF+ ++++YR
Sbjct: 232 KFYDVSSSYR 241


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KFFSLAATY 9
K FSLA+ Y
Sbjct: 127 KLFSLASEY 135


>sp|AROA_METPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaerula palustris (strain ATCC

Query: 2 FFSLAAT 8
FF+LAAT
Sbjct: 246 FFALAAT 252




12|Sequence|56|65|AATYRGAIVG

>sp|RIFK_PYRFU|RIBOFLAVIN kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ATYRGAIVG 10
A YRG I+G
Sbjct: 84 ALYRGIIIG 92


>sp|RUXX_THESM|PUTATIVE snRNP Sm-like protein|Thermococcus sibiricus (strain DSM 12597

Query: 1 AATYRGAIVG 10
A YRG ++G
Sbjct: 24 GAEYRGKLIG 33


>sp|IF6_METST|TRANSLATION initiation factor 6|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 AATYRGAIV 9
AAT RGA+V
Sbjct: 148 AATNRGALV 156


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 YRGAIV 9
YRGAIV
Sbjct: 580 YRGAIV 585


>sp|CDPAS_METJA|CDP-ARCHAEOL synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ATYRGAIVG 10
TYRG I G
Sbjct: 49 VTYRGCIFG 57


>sp|GUAAA_METB6|GMP synthase [glutamine-hydrolyzing] subunit A|Methanoregula boonei

Query: 1 AATYRGAIVG 10
A+ YRG I+G
Sbjct: 41 ASQYRGIILG 50


>sp|PURO_HALMA|IMP cyclohydrolase|Haloarcula marismortui (strain ATCC 43049

Query: 3 TYRGAIVG 10
T RGA+VG
Sbjct: 59 TERGAVVG 66


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 AATYRGAI 8
AATY GA+
Sbjct: 151 AATYLGAV 158




13|Sequence|61|70|GAIVGMIVAE

>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 GAIVGMIVA 9
GA++GM++
Sbjct: 28 GAVIGMVMG 36


>sp|Y1492_METJA|UNCHARACTERIZED protein MJ1492|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GAIVGMIV 8
G +VGMI+
Sbjct: 77 GVLVGMII 84


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VGMIVAE 10
VGMI+AE
Sbjct: 290 VGMIIAE 296




14|Sequence|66|75|MIVAEIKNRT

>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 MIVAEIKN 8
MI++E+KN
Sbjct: 296 MIISELKN 303


>sp|DHQS_METST|3-DEHYDROQUINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IVAEIKNRT 10
I+A ++NRT
Sbjct: 120 IIASLQNRT 128




15|Sequence|71|80|IKNRTKIHKE

>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 IKNRTKIHKE 10
IKNRTK ++E
Sbjct: 237 IKNRTKGYEE 246


>sp|PDXS_METLZ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanocorpusculum labreanum

Query: 2 KNRTKIHKE 10
+NR+K++KE
Sbjct: 3 ENRSKLNKE 11


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 IKNRTKIHKE 10
I+NRTK +E
Sbjct: 674 IENRTKAEQE 683




16|Sequence|76|85|KIHKEDGDIL

>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KIHKEDGDI 9
+IHK+DG++
Sbjct: 271 QIHKKDGEV 279


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KIHKEDGDIL 10
K+HKE D+L
Sbjct: 128 KLHKERTDLL 137


>sp|LEUD2_PYRFU|3-ISOPROPYLMALATE dehydratase small subunit 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KIHKEDGDIL 10
++ KEDG++L
Sbjct: 124 EVKKEDGEVL 133


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KIHKEDGD 8
+ H EDGD
Sbjct: 241 RFHTEDGD 248


>sp|DNLI_METM7|DNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 KIHKEDGDI 9
++HK DG++
Sbjct: 259 QVHKSDGNV 267


>sp|DNLI_METMP|DNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KIHKEDGDI 9
++HK +GD+
Sbjct: 259 QVHKSNGDV 267


>sp|COFE_ARCFU|COENZYME F420:L-glutamate ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KIHKEDGDIL 10
++ EDGD+L
Sbjct: 27 RVRFEDGDVL 36


>sp|KAE1B_NATPD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 HKEDGD 8
H EDGD
Sbjct: 185 HAEDGD 190


>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 3 HKEDGDIL 10
H E+GDIL
Sbjct: 547 HFEEGDIL 554


>sp|CAS1C_METRM|CRISPR-ASSOCIATED protein Cas1 3|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 IHKEDGDIL 10
IHK D IL
Sbjct: 12 IHKRDNQIL 20


>sp|Y1326_METJA|UNCHARACTERIZED GTP-binding protein MJ1326|Methanocaldococcus jannaschii (strain

Query: 5 EDGDIL 10
EDGDIL
Sbjct: 380 EDGDIL 385


>sp|MTD_METPE|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaerula

Query: 1 KIHKEDGDIL 10
K HK+DG I+
Sbjct: 261 KPHKKDGTIV 270


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KIHKEDGDIL 10
KI+ EDG I+
Sbjct: 344 KIYYEDGKIV 353


>sp|COBQ_METJA|PROBABLE cobyric acid synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KIHKEDGDI 9
++ KEDG+I
Sbjct: 47 RVAKEDGEI 55


>sp|RL13_HALSA|LARGE ribosomal subunit protein uL13|Halobacterium salinarum (strain ATCC

Query: 5 EDGDIL 10
EDGD+L
Sbjct: 111 EDGDVL 116


>sp|ENO_THEVO|ENOLASE volcanium (strain ATCC 51530

Query: 2 IHKEDGDIL 10
+H++ GDIL
Sbjct: 175 VHRKIGDIL 183




17|Sequence|81|90|DGDILASNFS

>sp|NIKR_HALWD|PUTATIVE nickel-responsive regulator|Haloquadratum walsbyi (strain DSM

Query: 3 DILASNF 9
DI+ASNF
Sbjct: 81 DIVASNF 87


>sp|DPCKG_PYRIL|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GDILASNF 9
GDI+ +NF
Sbjct: 48 GDIVTTNF 55


>sp|Y1807_METBF|PROTEIN Mbar_A1807|Methanosarcina barkeri (strain Fusaro /

Query: 2 GDILASNFS 10
G++L NFS
Sbjct: 192 GEVLEENFS 200


>sp|GUAAA_METM7|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 2 GDILASNF 9
GD+L NF
Sbjct: 172 GDVLLKNF 179




18|Sequence|86|95|ASNFSVDTQV

>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 2 SNFSVDTQV 10
SN+SV+T +
Sbjct: 494 SNYSVETAI 502




19|Sequence|91|100|VDTQVAYILS

>sp|HEM3_PYRNV|PROBABLE porphobilinogen deaminase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VDTQVAYILS 10
VDT+VA ILS
Sbjct: 149 VDTRVAKILS 158


>sp|HEM3_PYRCJ|PROBABLE porphobilinogen deaminase|Pyrobaculum calidifontis (strain DSM

Query: 1 VDTQVAYILS 10
VDT+V ILS
Sbjct: 149 VDTRVGKILS 158


>sp|XPB2_SULTO|DNA 3'-5' translocase XPB2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DTQVAYILS 10
DTQ+AY +S
Sbjct: 333 DTQMAYRIS 341


>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DTQVAYILS 10
+ ++AYILS
Sbjct: 291 EAEIAYILS 299




20|Sequence|96|105|AYILSLGVVK

>sp|Y1515_METJA|UNCHARACTERIZED protein MJ1515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YILSLGVVK 10
YI++LG VK
Sbjct: 207 YIINLGDVK 215


>sp|KAE1_PYRNV|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum

Query: 1 AYILSLGVVK 10
A+ S+GVVK
Sbjct: 10 AHTFSIGVVK 19




21|Sequence|101|110|LGVVKEFRKH

>sp|TRPA_PYRAB|TRYPTOPHAN synthase alpha chain|Pyrococcus abyssi (strain GE5 /

Query: 3 VVKEFRKH 10
+V+EFRKH
Sbjct: 71 IVREFRKH 78


>sp|TRPA_PYRFU|TRYPTOPHAN synthase alpha chain|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VVKEFRKH 10
+VKEFR+H
Sbjct: 71 IVKEFRRH 78


>sp|Y1782_THEKO|UNCHARACTERIZED serpin-like protein TK1782|Thermococcus kodakarensis (strain ATCC

Query: 1 LGVVKEF 7
LG+VKEF
Sbjct: 160 LGIVKEF 166


>sp|GATA_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 1 LGVVKEF 7
+GVVKEF
Sbjct: 257 IGVVKEF 263


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 LGVVKEF 7
+GVVKEF
Sbjct: 232 IGVVKEF 238


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 LGVVKEF 7
+GVVKEF
Sbjct: 232 VGVVKEF 238


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 LGVVKEF 7
+GVVKEF
Sbjct: 232 VGVVKEF 238


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 3 VVKEFRK 9
VVKEFR+
Sbjct: 240 VVKEFRE 246


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 LGVVKEF 7
+GVVKEF
Sbjct: 232 VGVVKEF 238


>sp|TRPA_METMP|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain DSM 14266

Query: 3 VVKEFRK 9
V+KEFRK
Sbjct: 70 VLKEFRK 76


>sp|TRPA_METM6|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C6 /

Query: 3 VVKEFRK 9
V+KEFRK
Sbjct: 70 VLKEFRK 76


>sp|TRPA_THEKO|TRYPTOPHAN synthase alpha chain|Thermococcus kodakarensis (strain ATCC

Query: 3 VVKEFRKH 10
+++EFR+H
Sbjct: 71 ILREFRRH 78


>sp|TRPA_METM5|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C5 /

Query: 3 VVKEFRK 9
V+KEFRK
Sbjct: 70 VLKEFRK 76


>sp|TRPA_METM7|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C7 /

Query: 3 VVKEFRK 9
V+KEFRK
Sbjct: 70 VLKEFRK 76


>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 3 VVKEFRK 9
+VKEFRK
Sbjct: 278 IVKEFRK 284


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 KEFRKH 10
+EFRKH
Sbjct: 625 EEFRKH 630


>sp|GATA_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 1 LGVVKEF 7
+GVVKEF
Sbjct: 234 VGVVKEF 240


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 VKEFRKH 10
VKEFRK
Sbjct: 407 VKEFRKQ 413


>sp|Y1459_PYRHO|PUTATIVE sugar kinase PH1459|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GVVKEFRKH 10
G+VK+ +KH
Sbjct: 82 GIVKDEKKH 90


>sp|TRPA_METVS|TRYPTOPHAN synthase alpha chain|Methanococcus vannielii (strain ATCC 35089

Query: 3 VVKEFRK 9
++KEFRK
Sbjct: 70 ILKEFRK 76


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VVKEFRK 9
VVKEFR+
Sbjct: 759 VVKEFRE 765


>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LGVVKEFRKH 10
LG+ +F KH
Sbjct: 169 LGIPADFTKH 178


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis

Query: 3 VVKEFRKH 10
++K+FR H
Sbjct: 7 IIKDFRSH 14




22|Sequence|106|115|EFRKHGIGSL

>sp|Y525_METKA|UNCHARACTERIZED protein MK0525|Methanopyrus kandleri (strain AV19 /

Query: 1 EFRKHGIGSL 10
+ R+HGIGS+
Sbjct: 29 KMREHGIGSV 38


>sp|ARGB_METST|ACETYLGLUTAMATE kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FRKHGIGSL 10
F KHGIG++
Sbjct: 287 FTKHGIGTM 295


>sp|YR33_THEPE|UNCHARACTERIZED 33.4 kDa protein in|Thermofilum pendens

Query: 3 RKHGIGSL 10
+KHGIG+L
Sbjct: 248 KKHGIGAL 255


>sp|COFH_ARCFU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 EFRKHGIGSL 10
E +K G+GS+
Sbjct: 146 ELKKEGLGSM 155


>sp|COBS_THEVO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FRKHGIG 8
FRKH +G
Sbjct: 164 FRKHSVG 170


>sp|YBP3_ACIAM|UNCHARACTERIZED 17.7 kDa protein in|Acidianus ambivalens (Desulfurolobus

Query: 1 EFRKHGIGSL 10
E ++H +GSL
Sbjct: 28 EMKEHNLGSL 37


>sp|RIO1_THEAC|RIO-TYPE serine/threonine-protein kinase Rio1|Thermoplasma acidophilum

Query: 2 FRKHGI 7
F+KHGI
Sbjct: 167 FQKHGI 172


>sp|HIS1_METBF|ATP phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FRKHGI 7
F+KHG+
Sbjct: 127 FKKHGV 132


>sp|Y521_ARCFU|UNCHARACTERIZED N-acetyltransferase AF_0521|Archaeoglobus fulgidus (strain ATCC

Query: 1 EFRKHGIGS 9
EFR GIG+
Sbjct: 90 EFRGEGIGA 98


>sp|GLYAR_HALSA|GLYCOLALDEHYDE reductase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FRKHGIGSL 10
R+HG G+L
Sbjct: 210 LREHGAGAL 218


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 RKHGIG 8
R+HGIG
Sbjct: 1110 REHGIG 1115


>sp|ARGB_METS3|ACETYLGLUTAMATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 FRKHGIGSL 10
F K+GIG++
Sbjct: 281 FTKNGIGTM 289




23|Sequence|111|120|GIGSLLLESL

>sp|MPTA_METST|GTP cyclohydrolase MptA|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GIGSLLLE 8
G+G++LLE
Sbjct: 203 GVGTILLE 210


>sp|MPTA_METS3|GTP cyclohydrolase MptA|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GIGSLLLE 8
G+G+LL+E
Sbjct: 201 GVGTLLIE 208


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 2 IGSLLLESL 10
+G+LLLE L
Sbjct: 19 LGALLLEEL 27


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 2 IGSLLLESL 10
+G+LLLE L
Sbjct: 19 LGALLLEEL 27


>sp|NTPPA_STAMF|DTTP/UTP pyrophosphatase|Staphylothermus marinus (strain ATCC 43588

Query: 1 GIGSLLLESL 10
G+G+LL+E++
Sbjct: 155 GLGALLIETI 164




24|Sequence|116|125|LLESLKDHIS

>sp|THPR_METTH|RNA 2',3'-cyclic phosphodiesterase|Methanothermobacter

Query: 1 LLESLKDHIS 10
L E L+DH+S
Sbjct: 11 LDEGLRDHVS 20


>sp|PYRE_PYRAR|OROTATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LLESLKDHI 9
LLE+L+ HI
Sbjct: 167 LLEALRPHI 175


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LLESLKDHIS 10
+L++L+DHI+
Sbjct: 324 VLKTLEDHIN 333


>sp|ILVC_PYRNV|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum neutrophilum (strain DSM

Query: 1 LLESLKDH 8
L+ES+K+H
Sbjct: 305 LMESVKEH 312


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 1 LLESLKDH 8
LLES +DH
Sbjct: 289 LLESARDH 296


>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LLESLKDHI 9
LLE L+ HI
Sbjct: 168 LLEELRPHI 176


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LLESLKDH 8
LLE LK+H
Sbjct: 210 LLEILKEH 217


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LLESLKDH 8
LLE LK+H
Sbjct: 210 LLEMLKEH 217


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LLESLKDH 8
LLE LK+H
Sbjct: 210 LLEILKEH 217


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 LLESLKDH 8
LLE LK+H
Sbjct: 210 LLELLKEH 217


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LLESLKDH 8
LLE LK+H
Sbjct: 210 LLELLKEH 217


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 LLESLKDH 8
LLE LK+H
Sbjct: 210 LLELLKEH 217


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 LLESLKDH 8
LLE LK+H
Sbjct: 210 LLELLKEH 217


>sp|Y1465_ARCFU|UNCHARACTERIZED protein AF_1465|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LESLKDHIS 10
LESLK+ +S
Sbjct: 104 LESLKEKVS 112




25|Sequence|121|130|KDHISTTAQD

>sp|PFDA_SACS2|PREFOLDIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KDHISTTAQD 10
KD IS AQD
Sbjct: 105 KDEISKAAQD 114


>sp|PRIS_METLZ|DNA primase small subunit PriS|Methanocorpusculum labreanum (strain

Query: 1 KDHISTTAQD 10
+ HIS T+QD
Sbjct: 52 RRHISFTSQD 61




26|Sequence|126|135|TTAQDHCKAI

>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 1 TTAQDHCKAI 10
TT Q H KA+
Sbjct: 73 TTLQQHAKAL 82


>sp|TRPF_AERPE|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 2 TAQDHCKAI 10
T +D CKA+
Sbjct: 169 TPRDACKAV 177


>sp|KCY_METB6|CYTIDYLATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 TTAQDHCKAI 10
T ++HC+AI
Sbjct: 124 TLEREHCEAI 133




27|Sequence|131|140|HCKAIYLHVL

>sp|OTC_PYRIL|ORNITHINE carbamoyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 KAIYLHVL 10
KAI+LH L
Sbjct: 258 KAIFLHCL 265


>sp|ASPD_METAR|L-ASPARTATE dehydrogenase|Methanocella arvoryzae (strain DSM 22066

Query: 1 HCKAIYL 7
HC +IYL
Sbjct: 113 HCCSIYL 119


>sp|OTC_PYRAE|ORNITHINE carbamoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KAIYLHVL 10
KA++LH L
Sbjct: 258 KAVFLHCL 265


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CKAIYLHV 9
C+A+ LH+
Sbjct: 213 CRAVLLHL 220




28|Sequence|136|145|YLHVLTTNNT

>sp|COBQ_HALMA|PROBABLE cobyric acid synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YLHVLTTNNT 10
YLH L +N+T
Sbjct: 433 YLHDLFSNDT 442


>sp|HISX_HALSA|HISTIDINOL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 3 HVLTTNNT 10
HVL TN T
Sbjct: 362 HVLPTNGT 369


>sp|G1PDH_KORCO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LHVLTT 7
LHVLTT
Sbjct: 20 LHVLTT 25


>sp|CDPAS_SULTO|CDP-ARCHAEOL synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LHVLTTN 8
LH+LT N
Sbjct: 148 LHILTNN 154




29|Sequence|141|150|TTNNTAINFY

>sp|Y1284_METJA|UNCHARACTERIZED protein MJ1284|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NNTAINFY 10
NNT++NFY
Sbjct: 105 NNTSVNFY 112




30|Sequence|146|155|AINFYENRDF

>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AINFYENRDF 10
AIN YEN DF
Sbjct: 665 AINAYENYDF 674


>sp|PROF_ODILC|ODIN profilin|Odinarchaeota yellowstonii (strain LCB_4)

Query: 1 AINFYENRD 9
AIN Y+NR+
Sbjct: 41 AINVYKNRE 49


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 INFYENRDF 10
INFY +R+F
Sbjct: 82 INFYMSRNF 90


>sp|SYW_PYRAR|TRYPTOPHAN--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 FYENRDF 10
FY +RDF
Sbjct: 54 FYAHRDF 60


>sp|Y1434_ARCFU|UNCHARACTERIZED protein AF_1434|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 INFYEN 7
IN+YEN
Sbjct: 56 INYYEN 61


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 FYENRDF 10
FY +RDF
Sbjct: 54 FYAHRDF 60


>sp|FAU1_SACI2|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 YENRDF 10
YENR+F
Sbjct: 198 YENREF 203


>sp|FAU1_SACI6|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.4 /

Query: 5 YENRDF 10
YENR+F
Sbjct: 198 YENREF 203


>sp|FAU1_SACI4|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.14.25 /

Query: 5 YENRDF 10
YENR+F
Sbjct: 198 YENREF 203


>sp|FAU1_SACI3|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.27)

Query: 5 YENRDF 10
YENR+F
Sbjct: 198 YENREF 203


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 YENRDF 10
YENR+F
Sbjct: 198 YENREF 203


>sp|FAU1_SACI7|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 YENRDF 10
YENR+F
Sbjct: 198 YENREF 203




31|Sequence|151|160|ENRDFKQHHY

>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENRDFKQHHY 10
E+RD KQ+ Y
Sbjct: 686 EDRDLKQYSY 695


>sp|ASSY_HALWD|ARGININOSUCCINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ENRDFKQH 8
+ RDFK+H
Sbjct: 289 DERDFKRH 296


>sp|AROC_METTP|CHORISMATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 NRDFKQHHY 10
NRD + HY
Sbjct: 88 NRDARSSHY 96


>sp|Y227_METJA|UNCHARACTERIZED protein MJ0227|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RDFKQHHY 10
RD K HH+
Sbjct: 48 RDIKYHHF 55


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 DFKQHHY 10
DF +HH+
Sbjct: 397 DFDRHHF 403


>sp|CDC61_ARCFU|ORC1-TYPE DNA replication protein 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 ENRDFKQHHY 10
+NRD +H Y
Sbjct: 15 KNRDVLRHSY 24




32|Sequence|156|165|KQHHYLPYYY

>sp|ARCD_HALSA|ARGININE/ORNITHINE antiporter ArcD|Halobacterium salinarum (strain ATCC 700922

Query: 5 YLPYYY 10
YLPYY+
Sbjct: 444 YLPYYF 449


>sp|ARCD_HALS3|ARGININE/ORNITHINE antiporter ArcD|Halobacterium salinarum (strain ATCC 29341

Query: 5 YLPYYY 10
YLPYY+
Sbjct: 444 YLPYYF 449


>sp|PSB_METB6|PROTEASOME subunit beta|Methanoregula boonei (strain DSM 21154

Query: 2 QHHYLPYY 9
Q+ Y PYY
Sbjct: 100 QNRYFPYY 107


>sp|GCH1_HYPBU|GTP cyclohydrolase 1|Hyperthermus butylicus (strain DSM 5456

Query: 2 QHHYLPYY 9
+HH LP++
Sbjct: 74 EHHLLPFF 81


>sp|MTNA_ARCFU|PUTATIVE methylthioribose-1-phosphate isomerase|Archaeoglobus fulgidus

Query: 2 QHHYLPYY 9
+HH +P+Y
Sbjct: 253 KHHNIPFY 260


>sp|KAE1_ARCFU|TRNA N6-adenosine threonylcarbamoyltransferase|Archaeoglobus fulgidus

Query: 1 KQHHYLPY 8
+++H+LPY
Sbjct: 182 QKYHFLPY 189


>sp|MOAA_SULTO|PROBABLE GTP 3',8-cyclase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KQHHYLPYYY 10
+ HY P YY
Sbjct: 217 RSKHYRPRYY 226


>sp|PSB_METMJ|PROTEASOME subunit beta|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 QHHYLPYY 9
Q+ Y PYY
Sbjct: 100 QNRYYPYY 107


>sp|RPO4_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo4|Saccharolobus solfataricus (strain

Query: 2 QHHYLPY 8
+ HY+PY
Sbjct: 8 EEHYIPY 14


>sp|RPO4_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo4|Saccharolobus shibatae (strain ATCC

Query: 2 QHHYLPY 8
+ HY+PY
Sbjct: 8 EEHYIPY 14


>sp|Y414_METJA|UNCHARACTERIZED protein MJ0414|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YLPYYY 10
Y PYYY
Sbjct: 160 YTPYYY 165


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 KQHHYLPYYY 10
K+H Y P YY
Sbjct: 1781 KKHKYDPDYY 1790


>sp|KDGA_SACS2|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 YLPYYY 10
Y PYYY
Sbjct: 113 YAPYYY 118


>sp|KDGA_SACSO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (Sulfolobus solfataricus)

Query: 5 YLPYYY 10
Y PYYY
Sbjct: 99 YAPYYY 104


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 4 HYLPY 8
HY+PY
Sbjct: 165 HYIPY 169


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 KQHHYLPYYY 10
++H Y P YY
Sbjct: 1654 RKHKYDPDYY 1663


>sp|Y2310_ARCFU|MEMO1 family protein AF_2310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HHYLP 7
HHYLP
Sbjct: 176 HHYLP 180


>sp|TYW3_METJA|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 KQHHYLPY 8
K HHY Y
Sbjct: 70 KWHHYASY 77


>sp|DTDA_SULAC|D-AMINOACYL-TRNA deacylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 HYLPYY 9
HY PY+
Sbjct: 165 HYAPYF 170


>sp|CMR6_PYRFU|CRISPR system Cmr subunit Cmr6|Pyrococcus furiosus (strain ATCC 43587

Query: 4 HYLPYY 9
HY PYY
Sbjct: 262 HYGPYY 267




33|Sequence|161|170|LPYYYSIRGV

>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 2 PYYYSIRGV 10
PYYYS GV
Sbjct: 518 PYYYSTHGV 526


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 2 PYYYSIR 8
PYYYS R
Sbjct: 542 PYYYSAR 548


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 1 LPYYYSIRG 9
LP YY +RG
Sbjct: 578 LPRYYKLRG 586


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 1 LPYYYSIRG 9
LP YY +RG
Sbjct: 578 LPRYYKLRG 586


>sp|AOR_THEKO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Thermococcus kodakarensis

Query: 1 LPYYYSIRG 9
LP YY +RG
Sbjct: 576 LPRYYKLRG 584


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 1 LPYYYSIRG 9
LP YY +RG
Sbjct: 576 LPRYYKLRG 584


>sp|Y075_METJA|UNCHARACTERIZED ATP-binding protein MJ0075|Methanocaldococcus jannaschii (strain

Query: 3 YYYSIRGV 10
+YY++RGV
Sbjct: 57 FYYNLRGV 64


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 2 PYYYSIR 8
PY+YS R
Sbjct: 518 PYFYSTR 524


>sp|SYFB_METST|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PYYYSIRGV 10
P YYS+ G+
Sbjct: 52 PDYYSVEGI 60


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 PYYYS 6
PYYYS
Sbjct: 526 PYYYS 530


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 2 PYYYS 6
PYYYS
Sbjct: 528 PYYYS 532


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 2 PYYYS 6
PYYYS
Sbjct: 528 PYYYS 532


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 2 PYYYS 6
PYYYS
Sbjct: 528 PYYYS 532


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 2 PYYYS 6
PYYYS
Sbjct: 518 PYYYS 522


>sp|Y3524_METJA|UNCHARACTERIZED protein MJECL24|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PYYYSIRGV 10
P Y+SI GV
Sbjct: 154 PSYFSIAGV 162


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 2 PYYYS 6
PYYYS
Sbjct: 543 PYYYS 547


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 2 PYYYSIRG 9
PY+YS G
Sbjct: 519 PYFYSTYG 526


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 2 PYYYS 6
PYYYS
Sbjct: 62 PYYYS 66


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 PYYYS 6
PYYYS
Sbjct: 531 PYYYS 535


>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 YYYSIRGV 10
YY+ +RGV
Sbjct: 343 YYWELRGV 350


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 YYYSIRGV 10
YY+ +RGV
Sbjct: 337 YYWEMRGV 344


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 PYYYSIR 8
PY YSIR
Sbjct: 967 PYKYSIR 973


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 YYYSIRGV 10
Y++ IRGV
Sbjct: 337 YWWEIRGV 344


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 2 PYYYSIRGV 10
P YY IRG+
Sbjct: 201 PVYYGIRGL 209


>sp|RRP4_SULAC|EXOSOME complex component Rrp4|Sulfolobus acidocaldarius (strain ATCC

Query: 2 PYYYSIRG 9
PYYY + G
Sbjct: 32 PYYYKVNG 39


>sp|QUEC1_SULTO|7-CYANO-7-DEAZAGUANINE synthase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YYYSIRGV 10
YYY+ RG+
Sbjct: 18 YYYTRRGL 25


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PYYYSIR 8
PY YSIR
Sbjct: 967 PYKYSIR 973


>sp|RLME_METMJ|RIBOSOMAL RNA large subunit methyltransferase|Methanoculleus marisnigri

Query: 3 YYYSIRG 9
++YS+RG
Sbjct: 166 HFYSVRG 172


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 LPYYY 5
LPYYY
Sbjct: 316 LPYYY 320


>sp|Y431_NANEQ|UPF0215 protein NEQ431|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 YYYSIRGV 10
+YY IRG+
Sbjct: 63 HYYQIRGI 70


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YYYSIRGV 10
YY SI+G+
Sbjct: 865 YYGSIKGI 872


>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 2 PYYYSIRGV 10
P Y IRGV
Sbjct: 299 PVLYGIRGV 307


>sp|SYP_PYRNV|PROLINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 YYYSIRGV 10
YY+ ++GV
Sbjct: 342 YYWELKGV 349


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 YYYSIRGV 10
YY+ ++GV
Sbjct: 343 YYWELKGV 350


>sp|SYP_PYRIL|PROLINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 YYYSIRGV 10
YY+ ++GV
Sbjct: 343 YYWELKGV 350




34|Sequence|166|175|SIRGVLKDGF

>sp|Y998_METJA|UNCHARACTERIZED protein MJ0998|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IRGVLKDGF 10
I+GV+K GF
Sbjct: 83 IKGVIKSGF 91


>sp|CDC6_PICTO|ORC1-TYPE DNA replication protein|Picrophilus torridus (strain ATCC 700027

Query: 2 IRGVLKDGF 10
I GV+K+GF
Sbjct: 218 INGVIKNGF 226


>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IRGVLKDG 9
I GVL+DG
Sbjct: 237 IEGVLRDG 244


>sp|MEND_HALWD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IRGVLKDGF 10
+RG +DGF
Sbjct: 568 VRGTDRDGF 576


>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 RGVLKDG 9
+G+LKDG
Sbjct: 289 KGILKDG 295


>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IRGVLKDG 9
I GV++DG
Sbjct: 234 IEGVMRDG 241


>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 3 RGVLKDGF 10
RG+L +GF
Sbjct: 278 RGILYEGF 285


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 3 RGVLKDGF 10
RG+L +GF
Sbjct: 278 RGILYEGF 285


>sp|LYSK_SULTO|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IRGVLKDGF 10
+RG++K G+
Sbjct: 273 MRGIIKQGY 281


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SIRGVLKDG 9
+I GVLK+G
Sbjct: 230 TISGVLKEG 238


>sp|HDRC1_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 IRGVLKD 8
+RG++KD
Sbjct: 162 VRGIMKD 168


>sp|COBQ_METVS|PROBABLE cobyric acid synthase|Methanococcus vannielii (strain ATCC 35089

Query: 5 VLKDGF 10
VLKDGF
Sbjct: 204 VLKDGF 209


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 2 IRGVLKDG 9
IRG L DG
Sbjct: 295 IRGALDDG 302


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 2 IRGVLKDG 9
IRG L DG
Sbjct: 295 IRGALDDG 302


>sp|PSB1_CALMQ|PROTEASOME subunit beta 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 GVLKDGF 10
GVL+DG+
Sbjct: 153 GVLEDGY 159


>sp|GPMPP_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE/MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 2 IRGVLKD 8
IRGVL+D
Sbjct: 102 IRGVLED 108


>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 5 VLKDGF 10
VLKDGF
Sbjct: 204 VLKDGF 209


>sp|COBQ_METM6|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C6 /

Query: 5 VLKDGF 10
VLKDGF
Sbjct: 204 VLKDGF 209


>sp|COBQ_METM5|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C5 /

Query: 5 VLKDGF 10
VLKDGF
Sbjct: 204 VLKDGF 209


>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 5 VLKDGF 10
VLKDGF
Sbjct: 204 VLKDGF 209




35|Sequence|171|180|LKDGFTYVLY

>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 2 KDGFTYVLY 10
KDGFT +LY
Sbjct: 278 KDGFTKLLY 286


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 3 DGFTYVL 9
DGFTY+L
Sbjct: 606 DGFTYIL 612


>sp|SYH_PYRCJ|HISTIDINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LKDGFTYVL 9
LKD F YVL
Sbjct: 371 LKDAFEYVL 379


>sp|TRPD_SULTO|ANTHRANILATE phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LKDGFTYVL 9
LKDG+ Y L
Sbjct: 306 LKDGYEYAL 314


>sp|RL6_THEAC|LARGE ribosomal subunit protein uL6|Thermoplasma acidophilum (strain

Query: 1 LKDGFTY 7
LKDGF Y
Sbjct: 81 LKDGFQY 87


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KDGFTYVLY 10
KDGF +LY
Sbjct: 268 KDGFVKLLY 276


>sp|SYDND_METJA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DGFTYVL 9
DGFTY L
Sbjct: 387 DGFTYYL 393


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 3 DGFTYVLY 10
DGF YV Y
Sbjct: 403 DGFEYVEY 410


>sp|Y1353_ARCFU|UNCHARACTERIZED protein AF_1353|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LKDGFTYVL 9
LKDG YVL
Sbjct: 97 LKDGVAYVL 105


>sp|HPRL2_HALVD|HGPRTASE-LIKE protein 2|Haloferax volcanii (strain ATCC 29605

Query: 2 KDGFTYVLY 10
KDG++Y+++
Sbjct: 16 KDGYSYLVH 24


>sp|HPRL1_HALMA|HGPRTASE-LIKE protein 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 KDGFTYVLY 10
KDG++Y+++
Sbjct: 16 KDGYSYLVH 24


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 KDGFTYVL 9
KDG YVL
Sbjct: 828 KDGIVYVL 835


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 LKDGFTYVL 9
+KDG YVL
Sbjct: 361 VKDGVVYVL 369


>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 KDGFTYVLY 10
KDG TY L+
Sbjct: 309 KDGVTYKLH 317


>sp|MDH_AERPE|MALATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 3 DGFTYVLY 10
D TYV+Y
Sbjct: 120 DAMTYVMY 127


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LKDGFTYVL 9
LKD F Y+L
Sbjct: 371 LKDAFEYIL 379


>sp|Y1189_METJA|UNCHARACTERIZED protein MJ1189|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKDGFTYVL 9
LKD F YVL
Sbjct: 8 LKDAFYYVL 16


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 KDGFTYVLY 10
KDG YVL+
Sbjct: 592 KDGIDYVLH 600


>sp|SPEE_PYRCJ|POLYAMINE aminopropyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LKDGFTYV 8
++DGF YV
Sbjct: 141 IQDGFVYV 148


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 2 KDGFTYVLY 10
K+G YVLY
Sbjct: 701 KEGGEYVLY 709


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LKDGFTYVL 9
LKD F Y L
Sbjct: 371 LKDAFEYAL 379


>sp|Y1220_SULTO|UNCHARACTERIZED protein STK_12200|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LKDGFTYV 8
LKDG YV
Sbjct: 33 LKDGIAYV 40


>sp|SPEE_PYRAR|POLYAMINE aminopropyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LKDGFTYV 8
++DGF YV
Sbjct: 141 IEDGFVYV 148


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LKDGFTY 7
+KDG TY
Sbjct: 236 MKDGHTY 242


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LKDGFTY 7
+KDG TY
Sbjct: 236 MKDGHTY 242


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LKDGFTY 7
+KDG TY
Sbjct: 239 MKDGHTY 245


>sp|HACA_METMA|PROBABLE methanogen homoaconitase large subunit|Methanosarcina mazei (strain

Query: 2 KDGFTY 7
KDGF Y
Sbjct: 364 KDGFIY 369


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 LKDGFTYVL 9
+KDG YVL
Sbjct: 833 VKDGKVYVL 841


>sp|SPEE_PYRNV|POLYAMINE aminopropyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LKDGFTYV 8
++DGF YV
Sbjct: 141 IEDGFVYV 148


>sp|SYH_PYRAR|HISTIDINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LKDGFTYVL 9
LKD F YVL
Sbjct: 371 LKDVFEYVL 379


>sp|SPEE_PYRAE|POLYAMINE aminopropyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LKDGFTYV 8
++DGF YV
Sbjct: 141 IEDGFVYV 148


>sp|SPEE_PYRIL|POLYAMINE aminopropyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LKDGFTYV 8
++DGF YV
Sbjct: 141 IEDGFVYV 148


>sp|Y1033_SACS2|KELCH domain-containing protein SSO1033|Saccharolobus solfataricus

Query: 1 LKDGFTY 7
LKDG TY
Sbjct: 379 LKDGITY 385




36|Sequence|176|185|TYVLYINGGH

>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 2 YVLYINGGH 10
Y+LY N GH
Sbjct: 78 YILYDNTGH 86


>sp|AAT_SULTO|ASPARTATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YVLYING 8
YV+Y+NG
Sbjct: 231 YVIYVNG 237


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YVLYINGGH 10
Y LY N GH
Sbjct: 78 YALYDNTGH 86


>sp|KTHY_PYRCJ|PROBABLE thymidylate kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YVLYIN 7
Y+LYIN
Sbjct: 105 YILYIN 110


>sp|NADC_METJA|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 2 YVLYINGG 9
Y +YI GG
Sbjct: 141 YAVYIGGG 148


>sp|Y544_METJA|UNCHARACTERIZED protein MJ0544|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YVLYINGGH 10
Y++YI+G +
Sbjct: 84 YIIYIDGDY 92


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 1 TYVLYINGG 9
TY+LYI G
Sbjct: 161 TYLLYIGVG 169


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 1 TYVLYINGG 9
TY+LYI G
Sbjct: 166 TYLLYIGVG 174


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 TYVLYINGG 9
TY+LYI G
Sbjct: 166 TYLLYIGVG 174


>sp|DTDA_KORCO|D-AMINOACYL-TRNA deacylase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 VLYINGGH 10
+LYING
Sbjct: 47 ILYINGSQ 54


>sp|HPRT_METAC|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 VLYING 8
VLYING
Sbjct: 105 VLYING 110


>sp|KAE1_METTP|TRNA N6-adenosine threonylcarbamoyltransferase|Methanothrix

Query: 3 VLYINGGH 10
VLY++GG+
Sbjct: 126 VLYVSGGN 133


>sp|KAE1_METBU|TRNA N6-adenosine threonylcarbamoyltransferase|Methanococcoides burtonii

Query: 3 VLYINGGH 10
VLY++GG+
Sbjct: 130 VLYVSGGN 137


>sp|Y1321_PYRHO|UPF0252 protein PH1321|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YVLYIN 7
YVLY+N
Sbjct: 126 YVLYLN 131


>sp|HPRT_METMA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VLYING 8
VLYING
Sbjct: 105 VLYING 110


>sp|KAE1_HYPBU|TRNA N6-adenosine threonylcarbamoyltransferase|Hyperthermus butylicus

Query: 3 VLYINGGH 10
VLY++GG+
Sbjct: 157 VLYVSGGN 164


>sp|PUS10_ACIS3|TRNA pseudouridine synthase Pus10|Acidilobus saccharovorans (strain DSM

Query: 3 VLYINGG 9
VLY+ GG
Sbjct: 304 VLYVEGG 310


>sp|CBIA_METJA|COBYRINATE a,c-diamide synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VLYINGGH 10
+LYI GG+
Sbjct: 291 ILYIGGGY 298


>sp|Y157_METJA|UNCHARACTERIZED protein MJ0157|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YVLYINGG 9
YV+YIN G
Sbjct: 14 YVVYINTG 21


>sp|RNP3_METTH|RIBONUCLEASE P protein component 3|Methanothermobacter thermautotrophicus

Query: 3 VLYINGGH 10
V+Y++GG+
Sbjct: 95 VIYVSGGN 102




37|Sequence|181|190|INGGHPPWTI

>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 3 GGHPPWTI 10
GHP W I
Sbjct: 195 AGHPEWAI 202


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 3 GGHPPWTI 10
GHP W I
Sbjct: 195 AGHPEWAI 202


>sp|MOAA_HALWD|PROBABLE GTP 3',8-cyclase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 GHPPWTI 10
GHP W I
Sbjct: 196 GHPEWNI 202


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 NGGHPPW 8
NG PPW
Sbjct: 529 NGKFPPW 535


>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 4 GHPPWT 9
GH PWT
Sbjct: 34 GHIPWT 39


>sp|ENGB_HALMA|PROBABLE GTP-binding protein EngB|Haloarcula marismortui (strain ATCC 43049

Query: 3 GGHPPW 8
G HPPW
Sbjct: 160 GLHPPW 165


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 HPPWTI 10
HPPW +
Sbjct: 307 HPPWEV 312


>sp|KTHY_HALSA|PROBABLE thymidylate kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 INGGHPPWT 9
+ G H PWT
Sbjct: 111 VRGIHQPWT 119


>sp|KTHY_HALS3|PROBABLE thymidylate kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 INGGHPPWT 9
+ G H PWT
Sbjct: 111 VRGIHQPWT 119


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 NGGHPPWT 9
NG + PWT
Sbjct: 407 NGKYVPWT 414


>sp|IDI2_METBU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcoides burtonii (strain DSM 6242

Query: 1 INGGHPPWT 9
I GGHP T
Sbjct: 66 ITGGHPDTT 74


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 NGGHPPWTI 10
NGG P W I
Sbjct: 108 NGGIPDWLI 116


>sp|IDI2_METBF|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 1 INGGHPPWT 9
I GGHP T
Sbjct: 68 ITGGHPDTT 76


>sp|Y626_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB06260|Pyrococcus abyssi (strain GE5 /

Query: 3 GGHPPWTI 10
GG PP+ I
Sbjct: 234 GGKPPYLI 241


>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 INGGHP 6
I GGHP
Sbjct: 68 ITGGHP 73


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 GHPPW 8
G PPW
Sbjct: 88 GSPPW 92


>sp|IDI2_METMA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 INGGHP 6
I GGHP
Sbjct: 68 ITGGHP 73


>sp|RNP4_THEKO|RIBONUCLEASE P protein component 4|Thermococcus kodakarensis (strain ATCC

Query: 2 NGGHPPWT 9
NG P WT
Sbjct: 124 NGNGPDWT 131


>sp|T1M1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 1 INGGHPP 7
+ GG+PP
Sbjct: 380 VRGGYPP 386


>sp|IDI2_METTH|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothermobacter thermautotrophicus (strain

Query: 1 INGGHP 6
I GGHP
Sbjct: 64 ITGGHP 69


>sp|IDI2_METAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 INGGHP 6
I GGHP
Sbjct: 68 ITGGHP 73


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM

Query: 4 GHPPWT 9
GH PW+
Sbjct: 34 GHIPWS 39


>sp|IPK_THEAC|ISOPENTENYL phosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 INGGHP 6
ING HP
Sbjct: 223 INGNHP 228


>sp|KTHY_HALMA|PROBABLE thymidylate kinase|Haloarcula marismortui (strain ATCC 43049

Query: 5 HPPWT 9
H PWT
Sbjct: 119 HAPWT 123


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 2 NGGHPPWTI 10
NGG P W I
Sbjct: 106 NGGIPDWLI 114


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 INGGHP 6
+ GGHP
Sbjct: 299 VQGGHP 304


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 1 INGGHPP 7
I G HPP
Sbjct: 192 IRGSHPP 198


>sp|RNH2_HYPBU|RIBONUCLEASE HII|Hyperthermus butylicus (strain DSM 5456

Query: 2 NGGHPPWTI 10
N +PPW +
Sbjct: 191 NPANPPWFV 199


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 NGGHPP 7
NGG PP
Sbjct: 1173 NGGTPP 1178


>sp|TKSP_THEKO|SUBTILISIN-LIKE serine protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GHPPWT 9
HP WT
Sbjct: 398 AHPSWT 403


>sp|HIS7_PYRAR|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GGHPPWTI 10
GG P W +
Sbjct: 105 GGRPYWAV 112




38|Sequence|186|195|PPWTILDYIQ

>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PPWTILDY 8
PP+T+LDY
Sbjct: 333 PPYTLLDY 340


>sp|RL10E_THEPD|LARGE ribosomal subunit protein uL16|Thermofilum pendens (strain DSM

Query: 1 PPWTILDYIQ 10
PP+T L+YI+
Sbjct: 15 PPYTRLEYIK 24


>sp|Y22A_METJA|UNCHARACTERIZED protein MJ0226.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPWTILDYI 9
PP+ ILDY+
Sbjct: 27 PPYCILDYL 35


>sp|LYSK_THEKO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Thermococcus kodakarensis

Query: 1 PP--WTILDYI 9
PP W ILD++
Sbjct: 227 PPKGWEILDFV 237


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 2 PWTILDY 8
P+T+LDY
Sbjct: 335 PYTLLDY 341


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 2 PWTILDY 8
P+T+LDY
Sbjct: 335 PYTLLDY 341


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 2 PWTILDYIQ 10
P TILD+I+
Sbjct: 540 PVTILDFIK 548


>sp|Y663_METTH|PUTATIVE ammonium transporter MTH_663|Methanothermobacter thermautotrophicus

Query: 3 WTILDYIQ 10
W I+DY++
Sbjct: 251 WVIMDYLK 258


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 PPWTILDYI 9
PP++ DY+
Sbjct: 413 PPYSAADYL 421


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 1 PPWTILDYI 9
PP++ DY+
Sbjct: 413 PPYSAADYL 421


>sp|Y011_METJA|UNCHARACTERIZED protein MJ0011|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WTILDY 8
WTI+D+
Sbjct: 187 WTIIDF 192


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 2 PWTILDYIQ 10
PW +LD ++
Sbjct: 486 PWPLLDRME 494


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 2 PWTILD 7
PW I+D
Sbjct: 212 PWNIID 217


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PWTILD 7
PWTI+D
Sbjct: 230 PWTIVD 235


>sp|SRP19_METM6|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C6

Query: 2 PWTILDYIQ 10
PW I YI+
Sbjct: 60 PWEICGYIK 68


>sp|GATC_METTP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Methanothrix thermoacetophila (strain

Query: 4 TILDYIQ 10
TILDY Q
Sbjct: 32 TILDYFQ 38


>sp|ARGDC_CALMQ|ARGININE decarboxylase proenzyme|Caldivirga maquilingensis (strain ATCC

Query: 2 PWTILDYI 9
PW DYI
Sbjct: 108 PWDAYDYI 115


>sp|SRP19_METM5|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C5

Query: 2 PWTILDYIQ 10
PW I YI+
Sbjct: 60 PWEICGYIK 68


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 3 WTILDY 8
WT+L+Y
Sbjct: 283 WTLLNY 288


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC

Query: 4 TILDYIQ 10
T++DY+Q
Sbjct: 50 TVMDYLQ 56


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PPWTILDYIQ 10
P W + D+I+
Sbjct: 19 PQWVVNDFIK 28


>sp|KTHY_METLZ|PROBABLE thymidylate kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 PWTILDYIQ 10
P TILD+++
Sbjct: 181 PETILDFVE 189


>sp|SRP19_METM7|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C7

Query: 2 PWTILDYIQ 10
PW I YI+
Sbjct: 60 PWEICGYIK 68




39|Sequence|191|200|LDYIQHLGSA

>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 DYIQHLGSA 10
D++ HLGSA
Sbjct: 111 DFVLHLGSA 119


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 DYIQHLGSA 10
D++ HLGSA
Sbjct: 110 DFVLHLGSA 118


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DYIQHLGSA 10
D++ HLGSA
Sbjct: 110 DFVLHLGSA 118


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DYIQHLGSA 10
D++ HLGSA
Sbjct: 110 DFVLHLGSA 118


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DYIQHLGSA 10
D++ HLGSA
Sbjct: 110 DFVLHLGSA 118


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DYIQHLGSA 10
D++ HLGSA
Sbjct: 110 DFVLHLGSA 118


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 DYIQHLGSA 10
DY HLG+A
Sbjct: 96 DYTIHLGNA 104


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 DYIQHLGSA 10
D++ HLG+A
Sbjct: 100 DFVIHLGNA 108


>sp|COFG_METMJ|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LDYIQHLGSA 10
LDY+ HL A
Sbjct: 86 LDYVYHLSLA 95


>sp|CBID_SULAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DYIQHLGS 9
DYI+H+ S
Sbjct: 186 DYIEHIKS 193


>sp|RTCA_METAC|RNA 3'-terminal phosphate cyclase|Methanosarcina acetivorans (strain

Query: 1 LDYIQHL 7
+DY+QH+
Sbjct: 129 IDYLQHV 135


>sp|SYY_HALMA|TYROSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LDYIQHL 7
L+Y+QHL
Sbjct: 257 LEYLQHL 263


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 LDYIQHL 7
LDY+ HL
Sbjct: 275 LDYLNHL 281


>sp|CDC6G_HALMA|ORC1-TYPE DNA replication protein 7|Haloarcula marismortui (strain ATCC 43049

Query: 1 LDYIQHLGS 9
LD I H+GS
Sbjct: 145 LDEIDHIGS 153


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 LDYIQHL 7
L+YI+HL
Sbjct: 799 LEYIRHL 805


>sp|RTCA_METBF|RNA 3'-terminal phosphate cyclase|Methanosarcina barkeri (strain Fusaro

Query: 1 LDYIQHL 7
+DY+QH+
Sbjct: 129 IDYLQHV 135


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DYIQHLGSA 10
D++ H+G+A
Sbjct: 112 DFVIHMGNA 120


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LDYIQHL 7
+DY++H+
Sbjct: 798 MDYVEHI 804


>sp|APGM_PYRAE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LDYIQHLGS 9
+DY+ LGS
Sbjct: 31 IDYLSSLGS 39




40|Sequence|196|205|HLGSALASLS

>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 HLGSALASL 9
H G ALA+L
Sbjct: 256 HCGDALATL 264




41|Sequence|201|210|LASLSPCSIP

>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 ASLSPCSIP 10
A SPCS P
Sbjct: 386 AERSPCSFP 394


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SLSPCSIP 10
+ SPC+IP
Sbjct: 38 AYSPCAIP 45


>sp|GATA_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 2 ASLSPCSIP 10
A+ PC+IP
Sbjct: 247 ATAVPCTIP 255




42|Sequence|206|215|PCSIPHRVYR

>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 PCSIPHRVYR 10
P SI HRV R
Sbjct: 414 PASIEHRVLR 423


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 PCSIPHRVYR 10
P SI HRV R
Sbjct: 414 PASIEHRVLR 423


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 1 PCSIPHRVYR 10
P SI HRV R
Sbjct: 414 PASIEHRVLR 423


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 1 PCSIPHRVYR 10
P SI HRV R
Sbjct: 414 PASIEHRVLR 423


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 1 PCSIPHRVYR 10
P SI HRV R
Sbjct: 414 PASIEHRVLR 423


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PCSIPHRVYR 10
P SI HRV R
Sbjct: 414 PASIEHRVVR 423


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PCSIPHRVYR 10
P SI HR+ R
Sbjct: 411 PASIEHRIVR 420


>sp|AROB_PYRCJ|3-DEHYDROQUINATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 SIPHRVYR 10
S+P RVYR
Sbjct: 152 SLPDRVYR 159


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 SIPHRVY 9
+IPH+VY
Sbjct: 348 NIPHKVY 354


>sp|AROB_PYRAE|3-DEHYDROQUINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 SIPHRVYR 10
S+P RVYR
Sbjct: 153 SLPPRVYR 160


>sp|AROB_PYRNV|3-DEHYDROQUINATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 SIPHRVYR 10
++P RVYR
Sbjct: 153 TLPERVYR 160


>sp|AROB_PYRIL|3-DEHYDROQUINATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 SIPHRVYR 10
++P RVYR
Sbjct: 153 TLPERVYR 160


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 5 PHRVY 9
PHRVY
Sbjct: 17 PHRVY 21


>sp|TRUD_NATPD|PROBABLE tRNA pseudouridine synthase D|Natronomonas pharaonis (strain ATCC

Query: 1 PCSIPHRVYR 10
P S PH V+R
Sbjct: 53 PGSYPHLVFR 62


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 PHRVY 9
PHRVY
Sbjct: 19 PHRVY 23


>sp|Y436_PYRFU|KELCH domain-containing protein PF0436|Pyrococcus furiosus (strain ATCC

Query: 4 IPHRVYR 10
+ HRVYR
Sbjct: 78 VEHRVYR 84


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PCSIPHRV 8
PC+IP+ +
Sbjct: 41 PCAIPYVI 48


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 1 PCSIPHRV 8
PC IP+ V
Sbjct: 44 PCGIPYVV 51


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 1 PCSIPHRV 8
PC IP+ V
Sbjct: 44 PCGIPYVV 51


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain

Query: 1 PCSIPHRV 8
PC IP+ V
Sbjct: 48 PCGIPYVV 55


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 1 PCSIPHRV 8
PC IP+ V
Sbjct: 47 PCGIPYVV 54


>sp|DPHB_STAMF|DIPHTHINE synthase|Staphylothermus marinus (strain ATCC 43588

Query: 2 CSIPHRVYR 10
C +P +YR
Sbjct: 250 CGLPEHIYR 258


>sp|MTRE_METBU|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcoides burtonii (strain

Query: 5 PHRVY 9
PHR+Y
Sbjct: 49 PHRIY 53


>sp|MCRW_METTH|METHYL-COENZYME M reductase II operon|Methanothermobacter thermautotrophicus

Query: 3 SIPHRVY 9
SIP RVY
Sbjct: 45 SIPDRVY 51


>sp|MFNA_ARCFU|PROBABLE L-aspartate decarboxylase|Archaeoglobus fulgidus (strain ATCC

Query: 2 CSIPHRV 8
C++PH V
Sbjct: 25 CTVPHPV 31


>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 2 CSIPHRV 8
C +PH +
Sbjct: 352 CGVPHEI 358


>sp|LEUC2_METKA|3-ISOPROPYLMALATE dehydratase large subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 3 SIPHRV 8
S+PHRV
Sbjct: 253 SVPHRV 258


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 2 CSIPHRV 8
C+IPH +
Sbjct: 33 CTIPHEM 39




43|Sequence|211|220|HRVYRQAHSL

>sp|COFH_METPE|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanosphaerula palustris (strain ATCC

Query: 2 RVYRQAHSL 10
R+ R+AHSL
Sbjct: 204 RIIREAHSL 212


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 HRVYRQAHSL 10
+ VYR +H L
Sbjct: 676 YEVYRTSHGL 685


>sp|COFH1_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina mazei (strain ATCC

Query: 3 VYRQAHSL 10
+YR+AH L
Sbjct: 354 LYREAHEL 361


>sp|Y378_METTH|UPF0104 membrane protein MTH_378|Methanothermobacter thermautotrophicus

Query: 2 RVYRQAHSL 10
R+Y++ HS+
Sbjct: 170 RIYQRIHSI 178


>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain ATCC

Query: 2 RVYRQAHSL 10
R+ R+AH L
Sbjct: 204 RIIREAHGL 212




44|Sequence|216|225|QAHSLLCSFL

***** No hits found ******


45|Sequence|221|230|LCSFLPWSGI

>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 CSFLPWSG 9
CSFL W G
Sbjct: 391 CSFLAWEG 398


>sp|IF2A_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 LCSFLPWSGI 10
L +FLPWS I
Sbjct: 37 LQAFLPWSEI 46


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 3 SFLPWSGI 10
SF+PWS +
Sbjct: 46 SFVPWSAV 53


>sp|IF2A_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 SFLPWSGI 10
+FLPWS I
Sbjct: 49 AFLPWSEI 56


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 CSFLPWSGI 10
C F+ W GI
Sbjct: 402 CEFVAWEGI 410


>sp|ATGT_THEVO|TRNA-GUANINE(15) transglycosylase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 SFLPWSGI 10
+ +PWSGI
Sbjct: 418 ALIPWSGI 425


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LCSFLPW 7
+CSF PW
Sbjct: 453 ICSFGPW 459


>sp|IF2A_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 1 LCSFLPWSGI 10
L +FLPWS +
Sbjct: 37 LQAFLPWSEV 46


>sp|IF2A_SACI7|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 LCSFLPWSGI 10
L +FLPWS +
Sbjct: 37 LQAFLPWSEV 46


>sp|IF2A_SACI6|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 LCSFLPWSGI 10
L +FLPWS +
Sbjct: 37 LQAFLPWSEV 46


>sp|IF2A_SACI4|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 LCSFLPWSGI 10
L +FLPWS +
Sbjct: 37 LQAFLPWSEV 46


>sp|IF2A_SACI3|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 LCSFLPWSGI 10
L +FLPWS +
Sbjct: 37 LQAFLPWSEV 46


>sp|IF2A_SACI2|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 LCSFLPWSGI 10
L +FLPWS +
Sbjct: 37 LQAFLPWSEV 46


>sp|IF2A_SACI1|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 LCSFLPWSGI 10
L +FLPWS +
Sbjct: 37 LQAFLPWSEV 46


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain

Query: 3 SFLPWSGI 10
SFLPW +
Sbjct: 52 SFLPWKAL 59


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 5 LPWSGI 10
LPWSG+
Sbjct: 355 LPWSGL 360


>sp|PRIS_STAMF|DNA primase small subunit PriS|Staphylothermus marinus (strain ATCC

Query: 4 FLPWSG 9
F PWSG
Sbjct: 315 FCPWSG 320


>sp|UPPS_ARCFU|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Archaeoglobus

Query: 1 LCSFLPWSG 9
L +FLPW
Sbjct: 207 LSNFLPWQA 215


>sp|RIFK_METLZ|RIBOFLAVIN kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LCSFLPWSG 9
LC F P+ G
Sbjct: 124 LCGFTPYPG 132


>sp|IF2P_PYRNV|PROBABLE translation initiation factor IF-2|Pyrobaculum neutrophilum

Query: 3 SFLPWSGI 10
SF+PW +
Sbjct: 45 SFVPWQAV 52


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 3 SFLPWSGI 10
SF+PW +
Sbjct: 45 SFVPWQAV 52


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum

Query: 3 SFLPWSGI 10
SF+PW +
Sbjct: 46 SFVPWQAV 53


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 2 CSFLPWSG 9
CSF W G
Sbjct: 414 CSFTVWEG 421


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 CSFLPWSG 9
CSF W G
Sbjct: 391 CSFPAWKG 398


>sp|IF2A_STAMF|TRANSLATION initiation factor 2 subunit|Staphylothermus marinus (strain ATCC

Query: 1 LCSFLPWSGI 10
L ++LPWS +
Sbjct: 37 LEAYLPWSEV 46


>sp|IF2A_HYPBU|TRANSLATION initiation factor 2 subunit|Hyperthermus butylicus (strain DSM

Query: 1 LCSFLPWSGI 10
L ++LPWS +
Sbjct: 37 LEAYLPWSEV 46


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 CSFLPWSG 9
C+F W G
Sbjct: 391 CAFTAWKG 398


>sp|UPPS_METMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina mazei

Query: 1 LCSFLPWSG 9
+ +FLPW
Sbjct: 215 ISNFLPWQA 223


>sp|DGGGP_METLZ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LCSFLPW 7
LCSF+P+
Sbjct: 212 LCSFVPF 218


>sp|AROC_METS5|CHORISMATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 2 CSFLPWSGI 10
CSF P S I
Sbjct: 297 CSFKPTSSI 305




46|Sequence|226|235|PWSGISSKSG

>sp|IF2A_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 1 PWSGISSK 8
PWS +SSK
Sbjct: 42 PWSEVSSK 49


>sp|IF2A_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 PWSGISSK 8
PWS ISS+
Sbjct: 42 PWSEISSR 49


>sp|IF2A_SACI7|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 PWSGISSK 8
PWS +SSK
Sbjct: 42 PWSEVSSK 49


>sp|IF2A_SACI6|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 PWSGISSK 8
PWS +SSK
Sbjct: 42 PWSEVSSK 49


>sp|IF2A_SACI4|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 PWSGISSK 8
PWS +SSK
Sbjct: 42 PWSEVSSK 49


>sp|IF2A_SACI3|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 PWSGISSK 8
PWS +SSK
Sbjct: 42 PWSEVSSK 49


>sp|IF2A_SACI2|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 PWSGISSK 8
PWS +SSK
Sbjct: 42 PWSEVSSK 49


>sp|IF2A_SACI1|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 PWSGISSK 8
PWS +SSK
Sbjct: 42 PWSEVSSK 49


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 1 PWSGISSKSG 10
PW ++ K G
Sbjct: 120 PWQRLAKKKG 129


>sp|ARADH_SACS2|D-ARABINOSE 1-dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 2 WSGISSKSG 10
W G+ +K G
Sbjct: 53 WKGVEAKQG 61


>sp|BIOU_HALMT|(S)-8-AMINO-7-OXONONANOATE synthase BioU|Haloferax mediterranei (strain ATCC 33500

Query: 2 WSGISSKSG 10
W G+ KSG
Sbjct: 200 WWGVGLKSG 208




47|Sequence|231|242|SSKSGIEYSRTM

>sp|TRMBR_THELN|HTH-TYPE sugar sensing transcriptional regulator|Thermococcus litoralis

Query: 1 SSKSGIEYSRT 11
S+KSGI Y+R
Sbjct: 39 STKSGIPYNRV 49


>sp|TRMBR_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus

Query: 1 SSKSGIEYSRT 11
S+KSGI Y+R
Sbjct: 39 STKSGIPYNRV 49


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 5 GIEYSRT 11
GI YSRT
Sbjct: 69 GISYSRT 75


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 SGIEYSRTM 12
SGIE SRT+
Sbjct: 352 SGIEVSRTV 360


>sp|SYFA_METBF|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 SKSGIEYSRT 11
+K G EY++T
Sbjct: 66 TKEGTEYTKT 75


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SKSGIEYSRT 11
S I+YSRT
Sbjct: 34 SSGNIQYSRT 43


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SSKSGIEYS 9
S KSG EYS
Sbjct: 1916 SEKSGEEYS 1924






THE END